isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
tx.1	chr1	-	2247	2	FSM	ENSMUSG00000025902.14	ENSMUST00000191939.2	840	2	127	-1534	-4	0	multi-exon	FALSE	canonical	3	6	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTTTAGTATGTAATT	NA	False	NA	NA	False	NA	NA	NA	4563831	4561153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_4562892_4563322
tx.10	chr1	+	6527	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	6	1074	6	-1	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCTATTCAGTCC	NA	False	NA	NA	False	NA	NA	NA	6284874	6345798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
tx.100	chr1	-	5814	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	2	104	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	12.0657683733739	47	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATACTTTTATGAATTT	NA	False	NA	NA	False	NA	NA	NA	24139420	24050567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
tx.1000	chr1	+	1732	14	FSM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	5	3	5	-3	multi-exon	FALSE	canonical	3	68	junction_2	20.0017750691572	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGACTTTGGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	164135245	164264866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
tx.10000	chr19	+	1110	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	2	376	2	0	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	261	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	False	NA	NA	False	NA	NA	NA	5138574	5142533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
tx.10001	chr19	-	1857	6	FSM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	56	0	-11	0	multi-exon	FALSE	canonical	3	994	junction_1	78.6628247649422	1174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGTGACTGAGTGTGG	1557	False	NA	NA	False	NA	NA	NA	5157044	5149232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
tx.10002	chr19	-	2941	16	NIC	ENSMUSG00000024862.17	novel	2940	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	17.0507738501479	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	5168323	5157773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
tx.10003	chr19	-	2906	16	FSM	ENSMUSG00000024862.17	ENSMUST00000116563.8	3169	16	263	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	16.0036107036992	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	5168325	5157773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
tx.10004	chr19	-	2668	15	NIC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	25.1344344658552	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	5168326	5157773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5168149
tx.10005	chr19	-	4341	24	FSM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	1	527	1	-527	multi-exon	FALSE	canonical	3	55	junction_19	9.30455099331212	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGGCTCCTGCCCCT	NA	False	NA	NA	False	NA	NA	NA	5323146	5183712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
tx.10006	chr19	-	3188	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	34	0	-13	0	multi-exon	TRUE	canonical	3	1448	junction_15	340.757138589935	2973	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3900	False	NA	NA	False	NA	NA	NA	5345449	5323959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
tx.10007	chr19	+	2484	3	FSM	ENSMUSG00000047658.7	ENSMUST00000061169.7	2421	3	-62	-1	-62	1	multi-exon	FALSE	canonical	2	5	junction_2	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGGTGTATGTCAATTA	NA	False	NA	NA	False	NA	NA	NA	5348296	5358767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5348529_5352463_5352700_5356751
tx.10008	chr19	-	744	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	515	2	-47	0	multi-exon	FALSE	canonical	3	4588	junction_2	727	1068	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8696	False	NA	NA	False	NA	NA	NA	5416681	5414667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5415187_5415845_5415985_5416595
tx.10009	chr19	+	2429	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	106	21	-98	-21	multi-exon	TRUE	canonical	3	703	junction_2	59.7581793564697	420	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTTAACTTCTCT	1898	False	NA	NA	False	NA	NA	NA	5416874	5421533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
tx.1001	chr1	-	2579	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	1	0	1	0	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	1604	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	NA	False	NA	NA	NA	164285923	164264677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
tx.10010	chr19	-	2537	20	FSM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	18	2536	18	0	multi-exon	FALSE	canonical	3	368	junction_1	46.7672968579718	811	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9058	False	NA	NA	False	NA	NA	NA	5438713	5430086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
tx.10011	chr19	-	1615	7	ISM	ENSMUSG00000039330.6	ENSMUST00000235569.2	1726	8	1285	-2	1285	2	3prime_fragment	TRUE	canonical	3	8	junction_6	13.7234592334926	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTGTGAGACTTCTGA	6269	False	NA	NA	False	NA	NA	NA	5451269	5440074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_5440226_5440636_5440756_5440941_5441042_5444310_5444482_5449940_5450089_5450261_5450966_5451047
tx.10012	chr19	+	195	2	Antisense	novelGene_ENSMUSG00000117845.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAACAAGCCAGATGAG	1093	False	NA	NA	False	NA	NA	NA	5451350	5503713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr19_+_5451497_5503664
tx.10013	chr19	-	930	7	FSM	ENSMUSG00000024914.17	ENSMUST00000148219.9	727	7	-205	2	15	1	multi-exon	TRUE	canonical	3	40	junction_1	395.234705235031	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTGGTTTCTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	5474992	5472835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5473004_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
tx.10014	chr19	-	983	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	12	-3	12	1	multi-exon	FALSE	canonical	3	999	junction_1	76.7282361469506	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTGGTTTCTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	5474995	5472835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
tx.10015	chr19	-	991	7	FSM	ENSMUSG00000024914.17	ENSMUST00000113674.8	939	7	-33	-19	25	1	multi-exon	FALSE	canonical	3	65	junction_3	385.460655147405	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTGGTTTCTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	5474982	5472835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5473054_5473358_5473448_5473587_5473703_5473799_5473920_5474209_5474304_5474388_5474462_5474700
tx.10016	chr19	+	1209	10	FSM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	1	-1	1	1	multi-exon	FALSE	canonical	3	126	junction_5	12.1837779216647	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	NA	False	NA	NA	NA	5510644	5515080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
tx.10017	chr19	+	1233	10	FSM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	-16	-2	-2	0	multi-exon	FALSE	canonical	3	40	junction_5	35.2423706830007	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTCCTTGTTCCAGG	NA	False	NA	NA	False	NA	NA	NA	5510640	5515079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
tx.10018	chr19	+	1857	11	NIC	ENSMUSG00000024909.16	novel	2634	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	23.0008695487801	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	5523964	5531881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_5524352_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
tx.10019	chr19	+	1587	11	FSM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	-30	0	-30	0	multi-exon	FALSE	canonical	3	63	junction_1	7.8873316146844	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	5524685	5531881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
tx.1002	chr1	-	4747	2	NNC	ENSMUSG00000040848.12	novel	3798	7	NA	NA	15172	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTAGTGTTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	165006714	165001909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_165004885_165004942
tx.10020	chr19	-	2008	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	52	7	-39	1	multi-exon	FALSE	canonical	3	74	junction_15	11.5573930163049	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGCCAAGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	5538378	5532866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
tx.10021	chr19	+	1119	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	65	1170	4	2	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	2463	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTTTGGGTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	5540547	5544059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
tx.10022	chr19	+	2791	3	FSM	ENSMUSG00000049562.7	ENSMUST00000235575.2	2785	3	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTCCTGGCCTGTTTTC	7960	False	NA	NA	False	NA	NA	NA	5618046	5621289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5618112_5618467_5618636_5618731
tx.10023	chr19	+	2885	2	FSM	ENSMUSG00000049562.7	ENSMUST00000235542.2	675	2	-33	-2177	-5	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCTCCTGGCCTGTTTT	7961	False	NA	NA	False	NA	NA	NA	5618047	5621288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5618112_5618467
tx.10024	chr19	+	629	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	-6	503	-6	2	multi-exon	FALSE	canonical	3	228	junction_3	35.9845645921816	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTCTGTGGGCACC	5039	False	NA	NA	False	NA	NA	NA	5651894	5652964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
tx.10025	chr19	+	1617	3	NNC	ENSMUSG00000024925.12	novel	771	3	NA	NA	-2	449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAGAATGGTCAACTGT	5043	False	NA	NA	False	NA	NA	NA	5651898	5657496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_5652109_5652220_5652420_5656288
tx.10026	chr19	-	2059	13	ISM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	192	2	-1	0	intron_retention	FALSE	canonical	3	118	junction_10	98.9692362414817	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3632	False	NA	NA	False	NA	NA	NA	5660073	5653043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879
tx.10027	chr19	-	1962	14	FSM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	190	2	1	0	multi-exon	FALSE	canonical	3	118	junction_10	96.4922046702747	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3630	False	NA	NA	False	NA	NA	NA	5660075	5653043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
tx.10028	chr19	-	1904	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	2	-1	-2	0	multi-exon	FALSE	canonical	3	222	junction_9	58.4797768251612	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3631	False	NA	NA	False	NA	NA	NA	5660074	5653043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
tx.10029	chr19	-	1807	13	FSM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	-19	-402	0	0	multi-exon	FALSE	canonical	3	222	junction_9	61.0948147463342	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3629	False	NA	NA	False	NA	NA	NA	5660076	5653043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
tx.1003	chr1	-	5383	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	-27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9019954019753	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTAGTGTTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	165021917	165001909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_165004885_165004942_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
tx.10030	chr19	+	2686	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	30	0	30	0	multi-exon	FALSE	canonical	3	73	junction_5	8.59069263796581	125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	5687540	5698158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
tx.10031	chr19	-	3618	17	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_16	18.506333375361	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTATTTGTGTTTGTGT	8120	False	NA	NA	False	NA	NA	NA	5713712	5701217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711687_5713631
tx.10032	chr19	-	3588	17	FSM	ENSMUSG00000056917.14	ENSMUST00000164304.9	3584	17	-4	0	-4	0	multi-exon	TRUE	canonical	3	17	junction_16	17.2005632175228	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTTGTGTTTGTGTGT	8120	False	NA	NA	False	NA	NA	NA	5713712	5701215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
tx.10033	chr19	-	3560	16	FSM	ENSMUSG00000056917.14	ENSMUST00000169854.2	3583	16	20	3	-7	0	multi-exon	FALSE	canonical	3	8	junction_15	19.0524422464826	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTTGTGTTTGTGTGT	8117	False	NA	NA	False	NA	NA	NA	5713715	5701215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5713631
tx.10034	chr19	-	7042	35	FSM	ENSMUSG00000054874.13	ENSMUST00000113615.9	7264	35	222	0	9	0	multi-exon	FALSE	canonical	3	44	junction_25	21.6322679648029	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	NA	False	NA	NA	NA	5738714	5714662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
tx.10035	chr19	-	7081	35	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_25	22.9138600567203	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	NA	False	NA	NA	NA	5738714	5714662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
tx.10036	chr19	-	7038	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	3	31	junction_28	24.0650071156035	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	NA	False	NA	NA	NA	5738713	5714662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
tx.10037	chr19	-	7065	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_25	25.2079242772344	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCAGTTTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	5738703	5714664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
tx.10038	chr19	+	3873	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	-173	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	23.4485545555329	27	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	5738596	5752893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_5738802_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
tx.10039	chr19	+	3756	12	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	20.4999496068721	31	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	5738770	5752893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_5738859_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
tx.1004	chr1	-	5451	8	FSM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	80	4	-37	-4	multi-exon	FALSE	canonical	3	60	junction_5	7.62380803664362	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTAGTGTTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	165021927	165001909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
tx.10040	chr19	+	3645	10	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	639	0	542	0	3prime_fragment	FALSE	canonical	3	57	junction_1	13.4577528254576	55	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	5739703	5752893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
tx.10041	chr19	-	3425	19	NIC	ENSMUSG00000024937.16	novel	6404	19	NA	NA	-16	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	4.54368371790941	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCTGCCCTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	5776325	5758076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5769975_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
tx.10042	chr19	-	1170	2	FSM	ENSMUSG00000024939.7	ENSMUST00000161368.2	1160	2	-10	0	-10	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	5779691	5778114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5778858_5779264
tx.10043	chr19	-	1217	2	FSM	ENSMUSG00000024939.7	ENSMUST00000099955.4	1197	2	-20	0	-18	0	multi-exon	FALSE	canonical	3	87	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	5779699	5778114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5778897_5779264
tx.10044	chr19	-	2530	5	FSM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	3	-1	3	1	multi-exon	FALSE	canonical	3	87	junction_1	171.430744033852	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	5781738	5778114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471_5781624_5781703
tx.10045	chr19	-	688	4	FSM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	6	5	6	-1	multi-exon	FALSE	canonical	3	466	junction_2	15.6276108929747	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGGTTTGTTCTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	5781749	5780335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
tx.10046	chr19	-	2572	17	FSM	ENSMUSG00000024941.10	ENSMUST00000025890.10	2586	17	14	0	11	0	multi-exon	FALSE	canonical	3	22	junction_5	68.5770552007011	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9921	False	NA	NA	False	NA	NA	NA	5821415	5808454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
tx.10047	chr19	-	2624	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	31	76	10	0	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	267	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9920	False	NA	NA	False	NA	NA	NA	5821416	5808454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
tx.10048	chr19	-	3034	2	ISM	ENSMUSG00000092274.4	ENSMUST00000174829.2	1030	4	-219	-1379	0	5	intron_retention	FALSE	canonical	3	17	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATTGTCATGGCTGTT	10001	False	NA	NA	False	NA	NA	NA	5895506	5892329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_5894463_5894605
tx.10049	chr19	-	2944	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	21	1539	-14	-1539	multi-exon	FALSE	canonical	3	167	junction_1	18.6118241986109	329	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGGAATGGTTATAAT	4356	False	NA	NA	False	NA	NA	NA	5925281	5901268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
tx.1005	chr1	-	5347	7	FSM	ENSMUSG00000040848.12	ENSMUST00000192185.6	3798	7	-19	-1530	-19	-4	multi-exon	FALSE	canonical	1	2	junction_5	27.3780122645081	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTAGTGTTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	165021909	165001909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015816_165015904_165021808
tx.10050	chr19	-	2133	2	FSM	ENSMUSG00000044390.6	ENSMUST00000236767.2	2155	2	27	-5	-15	0	multi-exon	FALSE	canonical	2	7	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGGAGGACCTTTCTT	8051	False	NA	NA	False	NA	NA	NA	5944150	5941165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5943146_5943997
tx.10051	chr19	-	2389	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	65	860	1	11	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	1145	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTGTCTCTTGACTCC	1337	False	NA	NA	False	NA	NA	NA	5962834	5947403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
tx.10052	chr19	-	2003	17	ISM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	3022	6	2968	-6	3prime_fragment	FALSE	canonical	3	352	junction_6	34.7611830027403	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	4648	False	NA	NA	False	NA	NA	NA	6011208	5990575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118
tx.10053	chr19	-	2379	18	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	3	37	junction_17	91.7598792094124	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTTAATCTTTTTTTT	1635	False	NA	NA	False	NA	NA	NA	6014221	5990573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
tx.10054	chr19	-	2406	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	11	4	11	-4	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	433	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTTAATCTTTTTTTT	1637	False	NA	NA	False	NA	NA	NA	6014219	5990573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
tx.10055	chr19	-	3045	21	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	51.2800887284724	213	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	2609	False	NA	NA	False	NA	NA	NA	6065221	6038573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
tx.10056	chr19	-	3046	21	NNC	ENSMUSG00000024942.20	novel	3122	22	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	60.7794990107684	43	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	1979	False	NA	NA	False	NA	NA	NA	6065851	6038572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065765
tx.10057	chr19	+	3309	16	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	31.1593752611741	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAGAACGTGTCACCTA	747	False	NA	NA	False	NA	NA	NA	6096613	6103742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_6097012_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
tx.10058	chr19	+	2995	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	469	0	-16	0	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAGAACGTGTCACCTA	1208	False	NA	NA	False	NA	NA	NA	6097074	6103742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
tx.10059	chr19	+	3065	15	ISM	ENSMUSG00000024807.19	ENSMUST00000156550.8	3363	16	383	-5	-16	2	intron_retention	FALSE	canonical	3	88	junction_11	13.7605247289602	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAACGTGTCACCTAGG	1208	False	NA	NA	False	NA	NA	NA	6097074	6103744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357
tx.1006	chr1	-	1753	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	-9	2636	-9	660	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	282	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTTTGCTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	165064521	165042490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
tx.10060	chr19	-	1721	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	23	20	-4	-20	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	482	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATCATCTGAAACTC	NA	False	NA	NA	False	NA	NA	NA	6107792	6103671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
tx.10061	chr19	-	1600	3	FSM	ENSMUSG00000007338.11	ENSMUST00000235520.2	1311	3	-35	-254	-8	-21	multi-exon	FALSE	canonical	3	20	junction_2	445.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATAATCATCTGAAACT	NA	False	NA	NA	False	NA	NA	NA	6107823	6103672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6105013_6105105_6105231_6107688
tx.10062	chr19	+	555	5	FSM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	58	0	-40	0	multi-exon	FALSE	canonical	3	11442	junction_1	1294.53167207295	1349	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1040	False	NA	NA	False	NA	NA	NA	6107931	6109549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
tx.10063	chr19	-	1484	10	FSM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	-13	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	30.8704981223334	168	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9948	False	NA	NA	False	NA	NA	NA	6117885	6112850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
tx.10064	chr19	-	1644	6	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	6181	147	-1352	1	3prime_fragment	FALSE	canonical	3	134	junction_3	10.303397497913	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGCCTGCAGGGGCG	7168	False	NA	NA	False	NA	NA	NA	6121080	6118018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468
tx.10065	chr19	-	2499	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	28	148	0	0	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTGCCTGCAGGGGC	1015	False	NA	NA	False	NA	NA	NA	6127233	6118019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
tx.10066	chr19	-	859	2	FSM	ENSMUSG00000024797.15	ENSMUST00000160590.2	840	2	-19	0	12	0	multi-exon	FALSE	canonical	3	178	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTAACTTTTGTTTC	999	False	NA	NA	False	NA	NA	NA	6127249	6125932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6126523_6126980
tx.10067	chr19	-	1338	8	FSM	ENSMUSG00000024792.10	ENSMUST00000160977.8	922	8	-10	-406	2	0	multi-exon	FALSE	canonical	3	381	junction_7	88.3658905474556	253	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGAAGCAGCTTTTTC	6458	False	NA	NA	False	NA	NA	NA	6134955	6130791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
tx.10068	chr19	+	1956	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	64	4	64	-4	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	528	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCAGACTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	6135076	6141803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
tx.10069	chr19	-	1340	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	105	-3	105	3	multi-exon	FALSE	canonical	3	283	junction_1	0	211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGAACTTTTAGACTTC	NA	False	NA	NA	False	NA	NA	NA	6168575	6166026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6166618_6167826
tx.1007	chr1	-	3299	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	2	809	2	-2	multi-exon	FALSE	canonical	3	29	junction_4	5.55583332638924	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAATTTGACTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	165288032	165157075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
tx.10070	chr19	-	1589	8	FSM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	46	0	46	0	multi-exon	FALSE	canonical	3	79	junction_5	6.49018096662888	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCCATTTGCTTATTA	NA	False	NA	NA	False	NA	NA	NA	6178288	6169428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
tx.10071	chr19	-	3485	3	NIC	ENSMUSG00000024944.7	novel	2305	4	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	728	junction_2	28	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGGCTGAGCCATTT	NA	False	NA	NA	False	NA	NA	NA	6191186	6184416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_6187671_6187759_6187871_6191066
tx.10072	chr19	-	891	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	393	2	-15	1	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	233	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGCCATTTGT	NA	False	NA	NA	False	NA	NA	NA	6191185	6184414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
tx.10073	chr19	+	1705	11	FSM	ENSMUSG00000024786.10	ENSMUST00000113528.2	1562	11	-139	-4	-60	4	multi-exon	FALSE	canonical	3	12	junction_2	3.41906419945575	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTGAGGTTTAAGCC	7978	False	NA	NA	False	NA	NA	NA	6234357	6274259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6234613_6245693_6245811_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
tx.10074	chr19	-	2724	14	FSM	ENSMUSG00000024777.11	ENSMUST00000025695.10	2742	14	18	0	-11	0	multi-exon	TRUE	canonical	3	82	junction_11	13.4199357135648	183	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGCTTTATTGAG	NA	False	NA	NA	False	NA	NA	NA	6285884	6277794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
tx.10075	chr19	+	6313	40	FSM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	23	35	23	5	multi-exon	TRUE	canonical	3	75	junction_9	16.8787297726361	118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACGTCCAGGTCCTCTG	8967	False	NA	NA	False	NA	NA	NA	6291720	6312330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
tx.10076	chr19	+	3206	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	140	7	-60	-7	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	721	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTCTCATGCTCCCT	NA	False	NA	NA	False	NA	NA	NA	6326894	6350119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
tx.10077	chr19	+	2419	3	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	17663	8	207	-8	3prime_fragment	FALSE	canonical	3	389	junction_1	32.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCTCTCATGCTCCC	630	False	NA	NA	False	NA	NA	NA	6344417	6350118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_6344657_6347562_6347728_6348103
tx.10078	chr19	+	2612	10	FSM	ENSMUSG00000024947.18	ENSMUST00000079327.12	2639	10	27	0	0	0	multi-exon	TRUE	canonical	3	89	junction_1	99.9901229690114	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	615	False	NA	NA	False	NA	NA	NA	6385069	6390919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
tx.10079	chr19	+	2968	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	7	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	26.9153766460735	333	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	621	False	NA	NA	False	NA	NA	NA	6385075	6390919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
tx.1008	chr1	+	753	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	178	94	-9	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	NA	False	NA	NA	NA	165288783	165308689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
tx.10080	chr19	+	2889	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	14	1741	14	6	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTCTCTGAGGTAGAG	1405	False	NA	NA	False	NA	NA	NA	6391203	6403904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
tx.10081	chr19	+	3281	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-13	2	intron_retention	FALSE	canonical	3	70	junction_9	334.755663382513	67	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGTCCGTTTCTTTTCTT	821	False	NA	NA	False	NA	NA	NA	6413938	6427228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6425687
tx.10082	chr19	+	3444	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	2	-3	intron_retention	FALSE	canonical	3	57	junction_2	340.283668733325	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	604	False	NA	NA	False	NA	NA	NA	6413721	6427229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
tx.10083	chr19	+	3301	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	219	833	-13	1	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	1187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	821	False	NA	NA	False	NA	NA	NA	6413938	6427227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
tx.10084	chr19	+	2673	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	-21	-3	-21	-3	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	553	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	813	False	NA	NA	False	NA	NA	NA	6413930	6427229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
tx.10085	chr19	+	2546	2	ISM	ENSMUSG00000024949.18	ENSMUST00000162237.2	513	4	597	-2250	597	0	3prime_fragment	FALSE	canonical	3	714	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCCATCCTCTGGTCT	5984	False	NA	NA	False	NA	NA	NA	6424755	6428060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_6424929_6425687
tx.10086	chr19	+	2897	20	FSM	ENSMUSG00000032648.15	ENSMUST00000035269.15	2874	20	-26	3	-26	-3	multi-exon	TRUE	canonical	1	1	junction_8	7.04005162408672	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTCTCTGTTGCAAA	NA	False	NA	NA	False	NA	NA	NA	6434402	6448486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6434752_6435714_6435817_6435895_6435975_6436053_6436158_6436403_6436536_6438092_6438205_6438296_6438380_6438766_6438911_6439189_6439283_6439485_6439633_6439802_6439967_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
tx.10087	chr19	+	1534	10	NNC	ENSMUSG00000032648.15	novel	532	3	NA	NA	-2647	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6.91214711777591	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTCTGTTGCAAAATA	NA	False	NA	NA	False	NA	NA	NA	6440093	6448489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_6440237_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
tx.10088	chr19	+	637	5	NIC	ENSMUSG00000032946.17	novel	2124	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.357558422953	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGGGTCATGTCACT	NA	False	NA	NA	False	NA	NA	NA	6449878	6453668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_6449995_6451745_6451894_6452501_6452605_6453053_6453117_6453461
tx.10089	chr19	+	583	4	FSM	ENSMUSG00000032946.17	ENSMUST00000113471.3	535	4	-48	0	-41	0	multi-exon	FALSE	canonical	0	0	junction_2	116.70761186258	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGGGTCATGTCACT	NA	False	NA	NA	False	NA	NA	NA	6451683	6453668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6451894_6452501_6452605_6453053_6453117_6453461
tx.1009	chr1	-	2283	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	2	0	2	0	multi-exon	TRUE	canonical	3	372	junction_2	205.630737002035	428	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	165462096	165419808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
tx.10090	chr19	+	963	7	FSM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	-42	-2	-42	2	multi-exon	FALSE	canonical	3	49	junction_2	53.7297765572209	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	NA	False	NA	NA	NA	6458392	6465243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
tx.10091	chr19	-	3144	17	FSM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	-1	-3	-1	3	multi-exon	FALSE	canonical	3	33	junction_16	8.80961832317383	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATCTGTGGTTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	6818005	6806574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
tx.10092	chr19	-	1242	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	20	0	20	0	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	177	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	6887454	6884073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
tx.10093	chr19	+	999	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	-14	0	-14	0	multi-exon	TRUE	canonical	3	803	junction_1	23.6971634495683	132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	9300	False	NA	NA	False	NA	NA	NA	6887100	6888396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
tx.10094	chr19	-	2249	7	FSM	ENSMUSG00000024955.16	ENSMUST00000025906.12	2241	7	-8	0	-3	0	multi-exon	FALSE	canonical	3	79	junction_4	9.26762584963856	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGTGGTCGGTGAGTCA	9677	False	NA	NA	False	NA	NA	NA	6899184	6888345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898989
tx.10095	chr19	-	2146	7	FSM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	-301	13	13	0	multi-exon	FALSE	canonical	3	22	junction_3	2.47767812455308	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCTGTCACTCGTCT	6512	False	NA	NA	False	NA	NA	NA	6918862	6915437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
tx.10096	chr19	+	929	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	61	0	-2	0	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	9382	False	NA	NA	False	NA	NA	NA	6919929	6929261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
tx.10097	chr19	-	4232	31	FSM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	25	0	25	0	multi-exon	FALSE	canonical	3	577	junction_24	50.7714377272191	1393	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4336	False	NA	NA	False	NA	NA	NA	6947157	6931080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
tx.10098	chr19	+	1001	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	-4	2	-4	1	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	1194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTTGGCTGGTCTTT	1576	False	NA	NA	False	NA	NA	NA	6952331	6954690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
tx.10099	chr19	-	667	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	-23	-2	-23	2	multi-exon	FALSE	canonical	3	194	junction_5	200.859752065963	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	6957831	6955106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
tx.101	chr1	-	5462	21	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	15.9953118131533	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCTCATGTTGACTTT	NA	False	NA	NA	False	NA	NA	NA	24139416	24050759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
tx.1010	chr1	-	2177	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	-6	0	2	0	multi-exon	FALSE	canonical	3	343	junction_1	201.827896981562	386	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	165462096	165419808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
tx.10100	chr19	-	623	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	46	-5	-15	2	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	6957823	6955106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
tx.10101	chr19	-	1252	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	-95	1	-73	-1	multi-exon	FALSE	canonical	3	113	junction_2	60.459352736639	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4685	False	NA	NA	False	NA	NA	NA	6965092	6959841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
tx.10102	chr19	-	1357	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	-76	0	-76	0	multi-exon	FALSE	canonical	3	141	junction_2	52.2323867176508	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4682	False	NA	NA	False	NA	NA	NA	6965095	6959840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
tx.10103	chr19	-	1184	6	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-46	1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	103.315826473973	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	4712	False	NA	NA	False	NA	NA	NA	6965065	6959839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964719
tx.10104	chr19	-	1058	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	-58	0	22	0	multi-exon	FALSE	canonical	3	112	junction_2	17.04582060213	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	6987	False	NA	NA	False	NA	NA	NA	6973463	6970385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
tx.10105	chr19	+	1130	7	FSM	ENSMUSG00000047656.10	ENSMUST00000088223.7	1103	7	-34	7	7	-5	multi-exon	FALSE	canonical	3	25	junction_3	9.59166304662544	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGATTTGTGGTTCC	NA	False	NA	NA	False	NA	NA	NA	6973505	6976407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
tx.10106	chr19	-	2113	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	-5	0	-5	0	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	4654	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3758	False	NA	NA	False	NA	NA	NA	7017340	6998069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
tx.10107	chr19	+	1294	11	FSM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	-62	-4	-62	4	multi-exon	FALSE	canonical	3	30	junction_9	10.4383906805599	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCTGGGTCTGGCTGGG	8470	False	NA	NA	False	NA	NA	NA	7034115	7175426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066_7175102_7175277
tx.10108	chr19	-	1664	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	40	9	40	-1	multi-exon	TRUE	canonical	3	1089	junction_1	76.373351955305	646	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTCTGCTGTCTGGC	NA	False	NA	NA	False	NA	NA	NA	7183641	7175575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
tx.10109	chr19	-	499	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	44	7	-29	-7	multi-exon	FALSE	canonical	3	12296	junction_1	0	1846	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAATGCATCATGTCCT	7410	False	NA	NA	False	NA	NA	NA	7194937	7192524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7192850_7194763
tx.1011	chr1	-	2986	2	ISM	ENSMUSG00000040723.15	ENSMUST00000040357.11	2622	7	51024	-2	51024	2	3prime_fragment	FALSE	canonical	3	37	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGGTTCTTATTCTGA	NA	False	NA	NA	False	NA	NA	NA	165484593	165476513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_165477780_165482873
tx.10110	chr19	-	3438	6	FSM	ENSMUSG00000024764.11	ENSMUST00000237834.2	1569	6	-113	-1756	16	0	multi-exon	FALSE	canonical	3	441	junction_1	33.2060235499525	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	NA	False	NA	NA	NA	7218532	7203037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218302
tx.10111	chr19	-	3058	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	16	2	combination_of_known_splicesites	TRUE	canonical	3	16	junction_3	179.745576363432	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGGATGGCATCCAGAT	NA	False	NA	NA	False	NA	NA	NA	7218532	7203035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207552_7207649_7211468_7211522_7212427_7212524_7218302
tx.10112	chr19	-	3217	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	14	0	14	0	multi-exon	FALSE	canonical	3	441	junction_1	30.7431757816732	820	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	NA	False	NA	NA	NA	7218534	7203037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
tx.10113	chr19	+	2835	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	-12	0	-12	0	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	1920	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	7245631	7252590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
tx.10114	chr19	+	2888	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	320.843155729575	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	7245605	7252590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_7246454_7247102_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
tx.10115	chr19	-	4615	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-379	-1362	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3908	False	NA	NA	False	NA	NA	NA	7319177	7252761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
tx.10116	chr19	-	4620	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_5	122.221904361768	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	4099	False	NA	NA	False	NA	NA	NA	7318986	7252760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
tx.10117	chr19	-	4654	19	FSM	ENSMUSG00000024969.16	ENSMUST00000171721.8	2660	19	-631	-1363	-4	0	multi-exon	FALSE	canonical	0	0	junction_4	113.063799863202	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3897	False	NA	NA	False	NA	NA	NA	7319188	7252760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
tx.10118	chr19	-	4058	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	305	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3867	False	NA	NA	False	NA	NA	NA	7319218	7252760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
tx.10119	chr19	-	4087	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	110.626498734355	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3864	False	NA	NA	False	NA	NA	NA	7319221	7252761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
tx.1012	chr1	-	2528	3	NNC	ENSMUSG00000040723.15	novel	5001	6	NA	NA	51024	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	12	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGGTTCTTATTCTGA	NA	False	NA	NA	False	NA	NA	NA	165484593	165476513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_165477780_165482873_165483606_165484063
tx.10120	chr19	-	3895	17	NIC	ENSMUSG00000024969.16	novel	3104	17	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	61.0913442620966	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3867	False	NA	NA	False	NA	NA	NA	7319218	7252761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
tx.10121	chr19	-	4222	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	120.360883937729	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTGCCTACTGTTCC	3896	False	NA	NA	False	NA	NA	NA	7319189	7252762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
tx.10122	chr19	-	1943	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	-18	1227	-18	-4	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	316	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTGTGTGGGCTAT	NA	False	NA	NA	False	NA	NA	NA	7360377	7335054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
tx.10123	chr19	-	1905	6	NNC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	-18	-4	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_1	121.287097417656	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTGTGTGGGCTAT	NA	False	NA	NA	False	NA	NA	NA	7360377	7335054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_7335815_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
tx.10124	chr19	-	6430	5	FSM	ENSMUSG00000024970.6	ENSMUST00000236817.2	1477	5	-118	-4835	-45	4835	multi-exon	FALSE	canonical	3	309	junction_1	7.5291101731878	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTAGGCTTTTGCCAG	NA	False	NA	NA	False	NA	NA	NA	7360404	7345763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
tx.10125	chr19	+	4063	3	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	6.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTTTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	7394976	7403269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_7395283_7397431_7397927_7400007
tx.10126	chr19	+	5171	4	ISM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	-3	1	-3	-1	intron_retention	FALSE	canonical	3	16	junction_1	22.3059533657621	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTGTTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	7394986	7403268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278
tx.10127	chr19	+	5002	5	FSM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	-13	0	-13	0	multi-exon	FALSE	canonical	3	16	junction_1	19.3713706278105	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTTTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	7394976	7403269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278_7399828_7400007
tx.10128	chr19	+	3632	2	ISM	ENSMUSG00000053080.11	ENSMUST00000160561.3	4064	3	1065	-364	1065	0	3prime_fragment	FALSE	canonical	3	42	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTTTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	7399457	7403269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_7399828_7400007
tx.10129	chr19	-	2809	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-47	0	18	0	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	797	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGTCTGCAACTTTAT	8992	False	NA	NA	False	NA	NA	NA	7460614	7403265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
tx.1013	chr1	+	2144	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	15	4	15	-4	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	199	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGTGTTGGACTGATT	NA	False	NA	NA	False	NA	NA	NA	165591329	165602873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
tx.10130	chr19	+	4620	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	-50	-202	-10	202	multi-exon	TRUE	canonical	3	31	junction_6	6.18409698788397	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGTTGCCAAGATGT	NA	False	NA	NA	False	NA	NA	NA	7471752	7514167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
tx.10131	chr19	+	785	5	FSM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	-5	2743	-5	-909	multi-exon	FALSE	canonical	3	141	junction_1	31.8825971338597	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTAGCTACCTGGTG	NA	False	NA	NA	False	NA	NA	NA	7534818	7563167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_7534930_7535296_7535361_7552301_7552405_7556318_7556588_7562929
tx.10132	chr19	+	1019	5	FSM	ENSMUSG00000060675.14	ENSMUST00000136756.2	1901	5	-24	906	2	-906	multi-exon	FALSE	canonical	3	44	junction_1	71.8135606971274	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGCTACCTGGTGTGA	NA	False	NA	NA	False	NA	NA	NA	7534825	7563170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_7535168_7535296_7535361_7552301_7552405_7556318_7556588_7562929
tx.10133	chr19	-	2469	10	FSM	ENSMUSG00000024972.17	ENSMUST00000159983.8	2470	10	5	-4	5	4	multi-exon	FALSE	canonical	2	3	junction_8	5.03322295684717	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATATGTTAGTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	7584553	7574020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_7575537_7576124_7576276_7578012_7578102_7578610_7578638_7579407_7579447_7580373_7580494_7581333_7581548_7581668_7581758_7584026_7584189_7584491
tx.10134	chr19	-	1412	8	FSM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	0	-19	0	19	multi-exon	FALSE	canonical	3	2940	junction_7	103.964868477534	513	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	NA	False	NA	NA	NA	8690349	8684931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
tx.10135	chr19	-	1863	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	5	-49	5	19	multi-exon	FALSE	canonical	3	2610	junction_8	198.183902915953	2004	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	NA	False	NA	NA	NA	8691238	8684931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
tx.10136	chr19	+	595	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	10	0	-2	0	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	NA	False	NA	NA	NA	8700848	8703807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
tx.10137	chr19	+	574	9	FSM	ENSMUSG00000108414.2	ENSMUST00000205909.2	709	9	135	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	124.260814418706	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	NA	False	NA	NA	NA	8701503	8703807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
tx.10138	chr19	+	1220	11	FSM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	-17	1	-5	-1	multi-exon	FALSE	canonical	3	1012	junction_8	78.6635875103596	489	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGACCTTTTGTGATG	958	False	NA	NA	False	NA	NA	NA	8713185	8717987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
tx.10139	chr19	+	1807	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	17	427	17	0	multi-exon	FALSE	canonical	3	140	junction_1	18.8417090519942	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6566	False	NA	NA	False	NA	NA	NA	8718793	8733006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
tx.1014	chr1	-	2539	16	FSM	ENSMUSG00000026565.19	ENSMUST00000160908.8	2591	16	-7	59	0	-28	multi-exon	FALSE	canonical	3	10	junction_7	5.03940031705713	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTTCATGGATTGGAGA	9694	False	NA	NA	False	NA	NA	NA	165830198	165703084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
tx.10140	chr19	+	4059	20	FSM	ENSMUSG00000010097.16	ENSMUST00000184970.9	4042	20	-14	-3	-14	3	multi-exon	FALSE	canonical	3	621	junction_4	65.017278760312	170	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8589	False	NA	NA	False	NA	NA	NA	8734456	8748274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
tx.10141	chr19	+	2292	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	22	12	-12	3	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	822	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8591	False	NA	NA	False	NA	NA	NA	8734458	8748274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
tx.10142	chr19	+	742	2	FSM	ENSMUSG00000117924.2	ENSMUST00000010248.4	748	2	6	0	6	0	multi-exon	FALSE	canonical	3	838	junction_1	0	176	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTCTGTCCTCTCTCTC	6525	False	NA	126	True	NA	NA	NA	8748365	8749839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8748680_8749411
tx.10143	chr19	-	838	5	FSM	ENSMUSG00000118346.2	ENSMUST00000010249.7	818	5	6	-26	6	0	multi-exon	FALSE	canonical	3	161	junction_4	40.2833712591188	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	5080	False	NA	27	True	NA	NA	NA	8751825	8749889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698
tx.10144	chr19	-	2047	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	18	0	-17	0	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	127	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTGTCTATGCTCGTG	9919	False	NA	NA	False	NA	NA	NA	8763662	8751855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
tx.10145	chr19	-	871	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	19	0	19	0	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	388	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	NA	False	NA	NA	NA	8775922	8770490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
tx.10146	chr19	+	2063	2	FSM	ENSMUSG00000071661.8	ENSMUST00000172175.3	2004	2	-53	-6	-53	6	multi-exon	FALSE	canonical	3	20	junction_1	0	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGTGTTGGCTGGTT	5375	False	NA	NA	False	NA	NA	NA	8779865	8782216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8780050_8780337
tx.10147	chr19	-	3339	4	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-587	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	116.57710848285	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAAATTTATTTCACT	1298	False	NA	NA	False	NA	NA	NA	8797284	8786429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_8789203_8793217_8793401_8795799_8796049_8797150
tx.10148	chr19	-	3523	3	FSM	ENSMUSG00000071660.11	ENSMUST00000088092.6	1585	3	291	-2229	-79	8	multi-exon	FALSE	canonical	3	241	junction_2	7	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTAGAAATTTATTTCAC	2215	False	NA	NA	False	NA	NA	NA	8796367	8786430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_8789203_8793217_8793401_8795799
tx.10149	chr19	-	3511	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	5	-7	5	7	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	305	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTAGAAATTTATTTCA	1890	False	NA	NA	False	NA	NA	NA	8796692	8786431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
tx.1015	chr1	-	3916	5	ISM	ENSMUSG00000026564.10	ENSMUST00000085992.4	4018	6	693	-3	693	-2	3prime_fragment	FALSE	canonical	3	43	junction_3	2.77263412660235	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCATTCTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	165954772	165925718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638
tx.10150	chr19	+	3088	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-37	2067	-37	-2067	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTGTATTTTCTTTACC	NA	False	NA	NA	False	NA	NA	NA	8797336	8809440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
tx.10151	chr19	+	3731	8	ISM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	4872	4	4610	-4	3prime_fragment	FALSE	canonical	3	98	junction_7	14.800717026205	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTCCTATCTCCTGT	NA	False	NA	NA	False	NA	NA	NA	8802245	8811503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
tx.10152	chr19	+	1929	12	FSM	ENSMUSG00000071657.13	ENSMUST00000171649.8	1962	12	17	16	17	0	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	NA	False	NA	NA	NA	8814847	8826031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
tx.10153	chr19	-	780	3	FSM	ENSMUSG00000071658.6	ENSMUST00000096259.6	1643	3	-14	877	-14	-877	multi-exon	TRUE	canonical	3	189	junction_2	8	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACGTCTGTGTTAGCG	4748	False	NA	NA	False	NA	NA	NA	8816572	8815173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_8815636_8815917_8816018_8816354
tx.10154	chr19	+	2815	2	FSM	ENSMUSG00000071656.8	ENSMUST00000096257.3	2583	2	-230	-2	-213	2	multi-exon	FALSE	canonical	2	2	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATACAGACTTTTGTGT	1205	False	NA	NA	False	NA	NA	NA	8827918	8831275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8828477_8829018
tx.10155	chr19	+	1096	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	-56	-7	7	0	multi-exon	FALSE	canonical	3	339	junction_1	323.787653323045	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCCTGGCTCCTTCCAG	5856	False	NA	NA	False	NA	NA	NA	8848866	8853027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
tx.10156	chr19	+	1141	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	-49	199	-15	0	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	420	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5897	False	NA	NA	False	NA	NA	NA	8848907	8853028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
tx.10157	chr19	+	1214	8	FSM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	-87	0	14	0	multi-exon	FALSE	canonical	3	1115	junction_3	101.556257657457	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5926	False	NA	NA	False	NA	NA	NA	8848936	8853028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
tx.10158	chr19	-	812	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	6	3	6	-3	multi-exon	FALSE	canonical	3	500	junction_1	0	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTTGGAAAGACCAT	NA	False	NA	NA	False	NA	NA	NA	8858281	8857380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_8857981_8858069
tx.10159	chr19	-	102	2	Genic_Genomic	ENSMUSG00000093314.3	novel	76	1	NA	NA	4	312	multi-exon	FALSE	canonical	3	548	junction_1	0	141	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTGTGTTCGCTACCT	NA	False	NA	NA	False	NA	NA	NA	8866134	8865750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr19_-_8865832_8866113
tx.1016	chr1	+	2335	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	180	0	1	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	NA	False	NA	NA	NA	165957986	165994079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
tx.10160	chr19	+	715	5	FSM	ENSMUSG00000071653.10	ENSMUST00000185488.7	500	5	-20	-195	-4	0	multi-exon	FALSE	canonical	3	137	junction_2	1592.05511839258	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTGGGATGAAGTGCAG	NA	False	NA	NA	False	NA	NA	NA	8866258	8868105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8866329_8866487_8866613_8867000_8867092_8867366_8867465_8867774
tx.10161	chr19	+	624	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	42	140	-4	0	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	606	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTGGGATGAAGTGCAG	NA	False	NA	NA	False	NA	NA	NA	8866258	8868105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
tx.10162	chr19	+	3269	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	5	0	5	0	multi-exon	FALSE	canonical	3	204	junction_1	0	328	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCAGTGTTTCTATCTG	NA	False	NA	NA	False	NA	NA	NA	8870373	8875252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8870513_8872122
tx.10163	chr19	+	3797	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	-15	6	-9	-6	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	1553	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1884	False	NA	NA	False	NA	NA	NA	8875455	8894030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
tx.10164	chr19	+	1416	5	FSM	ENSMUSG00000071649.7	ENSMUST00000237071.2	909	5	-90	-417	-1	-1	multi-exon	FALSE	canonical	3	30	junction_2	75.1644031440415	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCTTCATGGTTTCCTT	4732	False	NA	NA	False	NA	NA	NA	8897757	8904599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8898013_8899169_8899345_8903067_8903263_8903445_8903737_8904099
tx.10165	chr19	+	1591	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	11	1	-10	-1	multi-exon	FALSE	canonical	3	179	junction_3	18.060661671157	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCTTCATGGTTTCCTT	4723	False	NA	NA	False	NA	NA	NA	8897748	8904599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
tx.10166	chr19	+	3131	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	-1	5	-1	-5	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	1594	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGGCTCAGCTATTCT	3468	False	NA	NA	False	NA	NA	NA	8919237	8929662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
tx.10167	chr19	+	1447	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	120	297	120	-297	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	5732	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	963	False	NA	NA	False	NA	NA	NA	8944524	8955546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
tx.10168	chr19	+	1059	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	-9	-220	2	20	multi-exon	FALSE	canonical	3	34	junction_5	17.6703140888893	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGGTTTTGCGTACTT	NA	False	NA	NA	False	NA	NA	NA	8966649	9054298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
tx.10169	chr19	-	2004	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	22	2169	22	-2169	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	347	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	NA	NA	NA	9112978	9089400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
tx.1017	chr1	-	1542	12	FSM	ENSMUSG00000040629.9	ENSMUST00000038782.4	1546	12	4	0	4	0	multi-exon	FALSE	canonical	3	15	junction_10	4.55453638177285	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCACTCTTGCTTGTT	NA	False	NA	NA	False	NA	NA	NA	166066309	166028953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_166029305_166029843_166029920_166032358_166032492_166033421_166033485_166053158_166053301_166053405_166053461_166054134_166054260_166061733_166061776_166062969_166063126_166064441_166064542_166065831_166065925_166066103
tx.10170	chr19	+	2564	2	NNC	ENSMUSG00000100141.2	novel	1112	2	NA	NA	-298	1078	intron_retention	TRUE	canonical	0	0	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTATGATCCATCCAT	NA	False	NA	NA	False	NA	NA	NA	9584169	9586818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_9584927_9585011
tx.10171	chr19	-	3131	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	56	49	-6	-3	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	715	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTGTGGATATTG	NA	False	NA	NA	False	NA	NA	NA	9876859	9849708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
tx.10172	chr19	-	6049	8	ISM	ENSMUSG00000024660.10	ENSMUST00000237439.2	2643	18	12431	-335	2479	0	3prime_fragment	FALSE	canonical	3	417	junction_7	41.5019055377618	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	NA	False	NA	NA	NA	9860393	9849705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682
tx.10173	chr19	+	868	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	56	5	-2	0	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	1292	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTCTTTGTGATTG	4925	False	NA	NA	False	NA	NA	NA	9960065	9962457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
tx.10174	chr19	+	1967	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	42	-5	-29	-1	multi-exon	FALSE	canonical	3	22	junction_4	8.51377560192891	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCGGCAGTGGCCTTCA	4010	False	NA	NA	False	NA	NA	NA	9995599	10012824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
tx.10175	chr19	+	2207	10	FSM	ENSMUSG00000024663.21	ENSMUST00000113161.10	5146	10	23	2916	22	0	multi-exon	FALSE	canonical	3	20	junction_4	9.36897954837013	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGGCAGTGGCCTTCAC	3990	False	NA	NA	False	NA	NA	NA	9995579	10012825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
tx.10176	chr19	+	3324	12	FSM	ENSMUSG00000024664.6	ENSMUST00000115995.4	3687	12	-69	432	-69	6	multi-exon	TRUE	canonical	0	0	junction_1	0.642824346533225	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAAGTCTTCTAGCATG	593	False	NA	NA	False	NA	NA	NA	10018863	10037042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10019321_10029565_10029677_10030199_10030398_10031383_10031486_10031590_10031714_10031969_10032031_10032470_10032548_10032960_10033059_10033354_10033452_10033580_10033661_10033788_10033915_10035248
tx.10177	chr19	-	3179	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	-40	11	-40	-11	multi-exon	TRUE	canonical	3	359	junction_1	25.8738196920081	738	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTCTCACTTGCCTGT	9831	False	NA	NA	False	NA	NA	NA	10079150	10040139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
tx.10178	chr19	+	3415	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	45	0	-6	0	multi-exon	TRUE	canonical	3	652	junction_7	60.0436480355873	1575	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	NA	False	NA	NA	NA	10160296	10174238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
tx.10179	chr19	-	2194	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	147	0	22	0	multi-exon	FALSE	canonical	3	832	junction_1	0	789	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2177	False	NA	NA	False	NA	NA	NA	10181285	10176501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10178462_10181051
tx.1018	chr1	+	2234	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	-19	0	-19	0	multi-exon	FALSE	canonical	3	160	junction_4	12.2357789173508	236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTTCCTGTTTATTCAA	NA	False	NA	NA	False	NA	NA	NA	166206646	166221190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
tx.10180	chr19	-	2079	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	21	0	21	0	multi-exon	FALSE	canonical	3	443	junction_1	0	402	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2176	False	NA	NA	False	NA	NA	NA	10181286	10176501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10178462_10181167
tx.10181	chr19	+	403	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	197	6	-7	0	multi-exon	FALSE	canonical	3	2797	junction_1	495.826806679734	489	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4174	False	NA	NA	False	NA	NA	NA	10181574	10185182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
tx.10182	chr19	+	231	2	ISM	ENSMUSG00000036372.15	ENSMUST00000166412.2	447	4	1139	6	1139	0	3prime_fragment	FALSE	canonical	3	3159	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	1001	False	NA	NA	False	NA	NA	NA	10184535	10185182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_10184665_10185080
tx.10183	chr19	-	5615	26	FSM	ENSMUSG00000036098.16	ENSMUST00000189897.2	3339	26	-163	-2113	-19	0	multi-exon	FALSE	canonical	2	5	junction_20	4.43693587963585	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCTGACATCTTCT	7123	False	NA	NA	False	NA	NA	NA	10218131	10185635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383_10206472_10217922
tx.10184	chr19	-	5649	20	FSM	ENSMUSG00000035735.11	ENSMUST00000039327.11	5634	20	-15	0	-15	0	multi-exon	TRUE	canonical	1	2	junction_2	2.21177909362639	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTCCTGTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	10282256	10222628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10225989_10227732_10227921_10228430_10228561_10229402_10229603_10230693_10230767_10231080_10231150_10232170_10232314_10233024_10233106_10233487_10233566_10233660_10233745_10234181_10234336_10238014_10238140_10239857_10239936_10240457_10240593_10242371_10242460_10246550_10246690_10247080_10247183_10248351_10248564_10248857_10248996_10282184
tx.10185	chr19	+	4842	9	FSM	ENSMUSG00000024743.17	ENSMUST00000073899.6	1605	9	-65	-3172	-65	-1564	multi-exon	FALSE	canonical	3	41	junction_5	10.6418983268964	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCCTTGGCTGTTTCCTC	NA	False	NA	NA	False	NA	NA	NA	10366388	10428980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
tx.10186	chr19	-	1951	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-75	1105	-8	2	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTTTGATCTACAT	NA	False	NA	NA	False	NA	NA	NA	10502554	10479002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
tx.10187	chr19	-	1801	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	-101	-703	-11	0	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTGTTTGATCTAC	NA	False	NA	NA	False	NA	NA	NA	10502557	10479004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
tx.10188	chr19	+	3610	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-28	8	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	85.9051220824463	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCATTGTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	10502601	10525025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509624_10509699_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
tx.10189	chr19	+	3646	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-23	76	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	93.086841175324	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGATTCTGCATTGAATA	NA	False	NA	NA	False	NA	NA	NA	10502606	10525093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509624_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
tx.1019	chr1	-	3784	3	ISM	ENSMUSG00000026558.14	ENSMUST00000195443.6	738	6	6843	-3340	6843	-4	3prime_fragment	FALSE	canonical	3	1001	junction_2	5	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTCCTTTGTGGGTGCC	NA	False	NA	NA	False	NA	NA	NA	167057561	167050455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_167054091_167055300_167055350_167057461
tx.10190	chr19	+	3663	11	FSM	ENSMUSG00000034820.5	ENSMUST00000236206.2	3315	11	-23	-325	-23	74	multi-exon	FALSE	canonical	3	29	junction_4	86.2092802429066	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACGGATTCTGCATTGAA	NA	False	NA	NA	False	NA	NA	NA	10502606	10525091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
tx.10191	chr19	+	3648	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-22	76	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	89.3263678876512	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGATTCTGCATTGAATA	NA	False	NA	NA	False	NA	NA	NA	10502607	10525093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
tx.10192	chr19	+	3638	11	NIC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-22	77	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	93.34157701689	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGATTCTGCATTGAATAG	NA	False	NA	NA	False	NA	NA	NA	10502607	10525094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
tx.10193	chr19	+	3597	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	-21	-76	-21	76	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGATTCTGCATTGAATA	NA	False	NA	NA	False	NA	NA	NA	10502608	10525093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
tx.10194	chr19	+	3570	10	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-21	76	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	59.2792096047006	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGATTCTGCATTGAATA	NA	False	NA	NA	False	NA	NA	NA	10502608	10525093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
tx.10195	chr19	+	3676	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-22	77	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	81.5971200472174	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGATTCTGCATTGAATAG	NA	False	NA	NA	False	NA	NA	NA	10502607	10525094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
tx.10196	chr19	-	1549	5	FSM	ENSMUSG00000024666.7	ENSMUST00000235990.2	1260	5	-289	0	-34	0	multi-exon	FALSE	canonical	3	27	junction_3	58.8175143983491	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1476	False	NA	NA	False	NA	NA	NA	10554760	10547843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554447
tx.10197	chr19	-	1626	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	-38	2	-38	0	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1472	False	NA	NA	False	NA	NA	NA	10554764	10547843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
tx.10198	chr19	-	5335	2	NIC	ENSMUSG00000024666.7	novel	1593	4	NA	NA	-24	0	intron_retention	FALSE	canonical	3	102	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1486	False	NA	NA	False	NA	NA	NA	10554750	10547843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_10552876_10554447
tx.10199	chr19	-	1429	5	NIC	ENSMUSG00000024666.7	novel	1529	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	52.1464284491278	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1786	False	NA	NA	False	NA	NA	NA	10554450	10547841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554332
tx.102	chr1	+	2536	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	40	1877	10	1178	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGGACTTATTCAAAAGT	NA	False	NA	NA	False	NA	NA	NA	24717750	24802652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
tx.1020	chr1	-	4176	6	ISM	ENSMUSG00000026558.14	ENSMUST00000027839.14	803	7	5508	-3437	-815	-12	3prime_fragment	FALSE	canonical	3	994	junction_5	14.9264865256362	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACTCTTCACTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	167065219	167050463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057
tx.10200	chr19	+	2849	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	282	-1	0	1	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	NA	False	NA	NA	NA	10554817	10567194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
tx.10201	chr19	+	2757	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	0	-1283	0	2	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTTTTGTTCAGACT	NA	False	NA	NA	False	NA	NA	NA	10554817	10567195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
tx.10202	chr19	-	2748	18	NIC	ENSMUSG00000034371.10	novel	2437	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_17	12.7406930547585	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTCCCTGTTTACA	9756	False	NA	NA	False	NA	NA	NA	10582781	10569560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582304
tx.10203	chr19	-	2467	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	-31	1	3	0	multi-exon	FALSE	canonical	3	18	junction_17	12.9229818620786	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTTTGTCCCTGTTTAC	9758	False	NA	NA	False	NA	NA	NA	10582779	10569561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
tx.10204	chr19	-	2300	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236607.2	2516	18	215	1	-7	-1	multi-exon	FALSE	canonical	3	13	junction_17	13.858404068355	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	9734	False	NA	NA	False	NA	NA	NA	10582803	10569562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582772
tx.10205	chr19	+	4220	27	FSM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	242	-3	-18	3	multi-exon	FALSE	canonical	3	2606	junction_4	266.254060724097	3408	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	612	False	NA	NA	False	NA	NA	NA	10582932	10607186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
tx.10206	chr19	+	2522	5	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_1	44.7017896733453	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	NA	False	NA	NA	NA	10666108	10691990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_10666174_10683573_10683673_10687633_10687806_10688634_10688718_10689887
tx.10207	chr19	+	2683	5	FSM	ENSMUSG00000048832.10	ENSMUST00000087951.7	2686	5	3	0	3	0	multi-exon	FALSE	canonical	3	85	junction_1	17.2699160391705	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	NA	False	NA	NA	NA	10666117	10691990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689887
tx.10208	chr19	+	2513	4	NIC	ENSMUSG00000048832.10	novel	2686	5	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	51.9893151415643	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCCATGATGAGTT	NA	False	NA	NA	False	NA	NA	NA	10666117	10691992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_10666344_10683573_10683673_10688634_10688718_10689887
tx.10209	chr19	+	2590	5	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	46.3923485070545	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	NA	False	NA	NA	NA	10666127	10691990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_10666261_10683573_10683673_10687633_10687806_10688634_10688718_10689887
tx.1021	chr1	-	4559	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	160	12	160	-12	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	1388	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACTCTTCACTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	167112729	167050463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
tx.10210	chr19	-	3908	10	FSM	ENSMUSG00000024736.16	ENSMUST00000120524.2	3895	10	-11	-2	-11	2	multi-exon	FALSE	canonical	3	39	junction_7	10.088497300281	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGGTACTGCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	10847153	10835195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
tx.10211	chr19	-	3495	11	FSM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	151	11	-11	1	multi-exon	FALSE	canonical	3	39	junction_8	9.57131129992124	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTGGTACTGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	10847153	10835196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
tx.10212	chr19	+	2117	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	17	0	17	0	multi-exon	FALSE	canonical	3	125	junction_6	13.7346277707115	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	10872611	10882896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
tx.10213	chr19	+	2178	16	FSM	ENSMUSG00000024735.14	ENSMUST00000179297.3	6035	16	-170	4027	13	0	multi-exon	FALSE	canonical	3	14	junction_3	36.1106940146852	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	10872607	10882896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876289_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
tx.10214	chr19	-	2100	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	-8	911	-8	-911	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGGTGTGACAGGTACA	NA	False	NA	NA	False	NA	NA	NA	10926638	10919755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
tx.10215	chr19	+	2689	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-10	-1517	-10	1517	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTGTTGTGAGTTTC	151	False	NA	NA	False	NA	NA	NA	11747744	11753841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
tx.10216	chr19	-	2798	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	6	6	6	-6	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCTCTGGGGCCATC	7143	False	NA	NA	False	NA	NA	NA	11796300	11754854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
tx.10217	chr19	+	4060	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	35	121	-9	-121	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	287	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	NA	False	NA	NA	NA	11889797	11922334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
tx.10218	chr19	+	4606	14	FSM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	-117	-1	-117	1	multi-exon	FALSE	canonical	3	144	junction_3	15.1325504406969	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTCTGATTTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	11943187	11971477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
tx.10219	chr19	-	5364	9	FSM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	-134	-4	-134	4	multi-exon	FALSE	canonical	3	5	junction_1	4.63680924774785	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGTCGTTACTCCTA	8098	False	NA	NA	False	NA	NA	NA	12478952	12443697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_12447074_12450593_12450684_12455489_12455652_12459437_12459591_12460409_12460472_12462627_12462790_12463792_12463855_12469199_12469915_12478370
tx.1022	chr1	+	1218	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	355	0	-3	0	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	258	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGTCTCCTGTTCAAA	NA	False	NA	NA	False	NA	NA	NA	167136301	167158354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
tx.10220	chr19	-	4785	8	ISM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	8902	-5	8902	5	3prime_fragment	TRUE	canonical	3	5	junction_1	4.80645824036021	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGTCGTTACTCCTAA	7056	False	NA	NA	False	NA	NA	NA	12469916	12443696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_12447074_12450593_12450684_12455489_12455652_12459437_12459591_12460409_12460472_12462627_12462790_12463792_12463855_12469199
tx.10221	chr19	-	4786	2	ISM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	-647	22522	-647	-22522	5prime_fragment	FALSE	canonical	3	10	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGGCTCAGCTGTTTAT	7585	False	NA	NA	False	NA	NA	NA	12479465	12466223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_12469915_12478370
tx.10222	chr19	+	3286	4	FSM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	-16	-3	-16	-3	multi-exon	FALSE	canonical	3	71	junction_1	5.90668171555645	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTTTAGTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	12550870	12567129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_12550945_12554453_12554535_12561286_12561487_12564198
tx.10223	chr19	-	4091	6	ISM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	19132	-81	13315	81	3prime_fragment	TRUE	canonical	3	113	junction_5	18.1813090837816	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTGGTCTTCCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	12754358	12744302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223
tx.10224	chr19	-	4892	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	643	-4	643	4	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCCTTTTAATCTA	NA	False	NA	NA	False	NA	NA	NA	12772847	12744379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
tx.10225	chr19	-	4543	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	46.380637988787	76	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTATTTTCTAATTAT	NA	False	NA	NA	False	NA	NA	NA	14575414	14425511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
tx.10226	chr19	-	4479	18	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.5684201579782	10	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATTATTTTCTAATTA	NA	False	NA	NA	False	NA	NA	NA	14575423	14425512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
tx.10227	chr19	-	4545	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	50.813657394226	39	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTATTTTCTAATTAT	NA	False	NA	NA	False	NA	NA	NA	14575413	14425511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
tx.10228	chr19	-	1156	2	ISM	ENSMUSG00000024640.10	ENSMUST00000161707.2	1572	3	2650	-1	2650	1	3prime_fragment	FALSE	canonical	3	3561	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCATTGCCTGTGAATT	NA	False	NA	NA	False	NA	NA	NA	15884426	15882492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_15883516_15884293
tx.10229	chr19	-	2098	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	68	451	-61	1	multi-exon	TRUE	canonical	3	2829	junction_2	225.154079188008	1897	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCATTGCCTGTGAATT	NA	False	NA	NA	False	NA	NA	NA	15902355	15882492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
tx.1023	chr1	+	2511	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	80	244	80	-244	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	769	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTTCTGTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	167177639	167195857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
tx.10230	chr19	-	5096	3	FSM	ENSMUSG00000024640.10	ENSMUST00000161707.2	1572	3	-3522	-2	-3522	-1	multi-exon	FALSE	canonical	3	2829	junction_2	366	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCATTGCCTGTGAATTA	NA	False	NA	NA	False	NA	NA	NA	15890598	15882491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_15883516_15884293_15884432_15886664
tx.10231	chr19	-	2984	14	FSM	ENSMUSG00000041491.9	ENSMUST00000236749.2	2465	14	-308	-211	-12	3	multi-exon	FALSE	canonical	3	141	junction_1	15.7062532302438	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAGTGATAAAATACAG	163	False	NA	NA	False	NA	NA	NA	15962365	15933133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
tx.10232	chr19	-	2567	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	-15	-4	-15	3	multi-exon	FALSE	canonical	3	141	junction_1	15.9123876785558	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAGTGATAAAATACAG	160	False	NA	NA	False	NA	NA	NA	15962368	15933133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
tx.10234	chr19	+	5765	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	-122	1	-122	-1	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCGCTGCTCTTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	16110072	16364826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
tx.10235	chr19	+	4543	3	ISM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	202151	0	115350	0	3prime_fragment	FALSE	canonical	3	23	junction_2	5.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTGCTCTTCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	16312345	16364827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_16312475_16355520_16355675_16360567
tx.10236	chr19	+	2623	7	FSM	ENSMUSG00000024697.5	ENSMUST00000025602.4	3290	7	598	69	598	-69	multi-exon	FALSE	canonical	1	2	junction_2	2.3392781412697	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATGATGTGCTTCTTAGA	NA	False	NA	NA	False	NA	NA	NA	16413723	16588115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_16414182_16511076_16511262_16576303_16576459_16580627_16580757_16582326_16582457_16585346_16585501_16586703
tx.10237	chr19	-	10865	72	FSM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	-27	0	-21	0	multi-exon	TRUE	canonical	3	25	junction_58	9.97459578127363	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTCAATGGATATTT	NA	False	NA	NA	False	NA	NA	NA	16758318	16593049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
tx.10238	chr19	-	12391	69	NIC	ENSMUSG00000046230.12	novel	2939	22	NA	NA	-24	0	intron_retention	TRUE	canonical	3	14	junction_1	10.4210140870299	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	16758321	16609919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_16612958_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
tx.1024	chr1	-	668	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	11	418	11	-418	multi-exon	FALSE	canonical	3	373	junction_1	22.7912263820971	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCCTGCCTGCATCTC	4967	False	NA	NA	False	NA	NA	NA	167221399	167199952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
tx.10240	chr19	+	4157	9	FSM	ENSMUSG00000039126.11	ENSMUST00000223920.2	1803	9	-4	-2350	-4	2	multi-exon	FALSE	canonical	3	57	junction_3	14.3352711868315	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTTTCCTCTTTCAAC	NA	False	NA	NA	False	NA	NA	NA	17114125	17201298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
tx.10241	chr19	+	3989	8	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	-11	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	24.5165500119775	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGTTTCCTCTTTCAA	NA	False	NA	NA	False	NA	NA	NA	17114118	17201297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
tx.10242	chr19	-	4588	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	16	2	16	0	multi-exon	FALSE	canonical	3	31	junction_2	7	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTATGTCTGCACACAT	8050	False	NA	NA	False	NA	NA	NA	17334015	17303506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_17307853_17310473_17310621_17333920
tx.10243	chr19	+	2462	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	16	4	16	-4	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	199	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGAATCCTGTATCT	1340	False	NA	NA	False	NA	NA	NA	17371422	17378709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
tx.10244	chr19	-	1267	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-25	1484	9	-3	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGTTTTTGTGCTATC	NA	False	NA	NA	False	NA	NA	NA	18609178	18558175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
tx.10245	chr19	+	1975	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	2	-37	2	37	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGTCAGTTGTCATT	NA	False	NA	NA	False	NA	NA	NA	18609315	18629829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
tx.10247	chr19	+	1885	10	NNC	ENSMUSG00000037847.15	novel	1768	10	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	32.8389260136259	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTTTGGTAGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	18609315	18629555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18625715_18625900_18628599
tx.10248	chr19	+	3889	7	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-9	-534	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	440.453554115906	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTTCTTGGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	18648118	18684030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18681383
tx.10249	chr19	+	3509	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-3	1012	-3	-1012	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	543	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTCACTGGAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	18648124	18683552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
tx.1025	chr1	-	2076	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	-8	0	-8	0	multi-exon	FALSE	canonical	3	87	junction_14	29.0531708199618	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	NA	False	NA	NA	NA	169359005	169325879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
tx.10250	chr19	+	4203	8	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	18	-530	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	433.244145714536	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTGGTTGTTTCCCTC	NA	False	NA	NA	False	NA	NA	NA	18648145	18684034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_18648800_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
tx.10251	chr19	+	1698	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	-20	-1	-20	1	multi-exon	FALSE	canonical	3	347	junction_1	0	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	9294	False	NA	NA	False	NA	NA	NA	18690536	18695793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_18691024_18694582
tx.10252	chr19	+	1688	2	FSM	ENSMUSG00000047044.8	ENSMUST00000055792.8	1631	2	-56	-1	-13	1	multi-exon	FALSE	canonical	3	77	junction_1	0	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	9301	False	NA	NA	False	NA	NA	NA	18690543	18695793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_18691024_18694585
tx.10253	chr19	-	1403	13	FSM	ENSMUSG00000024659.16	ENSMUST00000025561.8	1674	13	271	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	3.1446603773522	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCATTGTCTCTC	7276	False	NA	NA	False	NA	NA	NA	20368037	20350791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
tx.10254	chr19	+	2721	7	NNC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	-443	-263	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	136.840539802112	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTTGTTTATTGGGTT	NA	False	NA	NA	False	NA	NA	NA	21249198	21259391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_21249332_21249625_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
tx.10255	chr19	+	2567	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	4	4814	4	-264	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTGTTTATTGGGT	NA	False	NA	NA	False	NA	NA	NA	21249645	21259390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
tx.10256	chr19	-	1873	3	FSM	ENSMUSG00000035171.10	ENSMUST00000179768.8	962	3	102	-1013	-15	0	multi-exon	FALSE	canonical	3	207	junction_2	1.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	614	False	NA	NA	False	NA	NA	NA	21630179	21574675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_21576233_21596472_21596580_21629970
tx.10257	chr19	-	1573	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	40	1	-19	-1	multi-exon	FALSE	canonical	3	194	junction_1	6.94422221866655	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTCTTGTTGTTG	493	False	NA	NA	False	NA	NA	NA	21630300	21574676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
tx.10258	chr19	+	2693	5	NNC	ENSMUSG00000047368.5	novel	2259	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	67.5240697825598	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCTGTGCTTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	21630547	21663001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_21630958_21654359_21654453_21655716_21656187_21658231_21658412_21661461
tx.10259	chr19	+	2647	4	FSM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	-387	-1	-47	1	multi-exon	FALSE	canonical	3	120	junction_3	15.3260852434302	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGTGCTTGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	21630501	21663002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_21630958_21655716_21656187_21658231_21658412_21661461
tx.1026	chr1	-	2010	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	24	371	-12	6	multi-exon	TRUE	canonical	3	65	junction_13	32.5556419455247	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCAGGATGTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	169359009	169325873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
tx.10260	chr19	+	6663	25	FSM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	4	0	2	0	multi-exon	FALSE	canonical	3	20	junction_2	23.4529301059709	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTATTTGTGAATC	NA	False	NA	NA	False	NA	NA	NA	21755709	21835691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_21756151_21757534_21757617_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
tx.10261	chr19	+	6589	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	-21	34	-5	-1	multi-exon	FALSE	canonical	3	56	junction_1	16.2129029807244	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTGTATTTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	21755700	21835690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
tx.10263	chr19	-	5212	2	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	22705268	22699838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr19_-_22700538_22700755
tx.10264	chr19	+	4682	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-201	5	-201	-5	multi-exon	FALSE	canonical	3	482	junction_1	0	794	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCAGCCATTACGTTC	NA	False	NA	NA	False	NA	NA	NA	23118388	23145493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_23119624_23142046
tx.10265	chr19	-	5610	7	ISM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	56179	-10	-1837	10	3prime_fragment	FALSE	canonical	3	141	junction_6	124.614628176453	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGAGTATTTTAATACT	NA	False	NA	NA	False	NA	NA	NA	23195003	23183804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518
tx.10266	chr19	-	4216	6	ISM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	57974	3	-42	-3	intron_retention	FALSE	canonical	3	204	junction_5	94.1156735087201	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTTATTTAAGATGAGA	NA	False	NA	NA	False	NA	NA	NA	23193208	23183817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008
tx.10267	chr19	-	5681	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	106.988284664984	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTATTTAAGATGAGAG	NA	False	NA	NA	False	NA	NA	NA	23251234	23183816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195820_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
tx.10268	chr19	-	5318	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	5	-465	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	106.988284664984	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATAACTAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	23251256	23184279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192590_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
tx.10269	chr19	-	5739	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	-60	4	19	-4	multi-exon	FALSE	canonical	2	93	junction_7	95.2415696910872	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGTTATTTAAGATGAG	NA	False	NA	NA	False	NA	NA	NA	23251242	23183818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
tx.1027	chr1	-	4579	9	FSM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	31	2	31	-2	multi-exon	TRUE	canonical	3	45	junction_1	8.48528137423857	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTAGACTCAGTTAAT	NA	False	NA	NA	False	NA	NA	NA	169796779	169777105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
tx.10270	chr19	-	8940	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	19	-8	intron_retention	FALSE	canonical	2	141	junction_6	79.699767440418	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTATAGGTTATTTAAGA	NA	False	NA	NA	False	NA	NA	NA	23251242	23183822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
tx.10271	chr19	-	5713	24	NIC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	392	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGTTATTTAAGATGAG	NA	False	NA	NA	False	NA	NA	NA	23251261	23183818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
tx.10272	chr19	+	1490	8	NIC	ENSMUSG00000074925.5	novel	12574	7	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	7.20544012166771	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTATTTTTTAAATGAT	NA	False	NA	NA	False	NA	NA	NA	23664756	23698323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421_23697719_23698129
tx.10273	chr19	+	9827	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	1	2746	1	-2746	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCGCTATGTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	23664793	23706286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
tx.10274	chr19	-	2542	11	FSM	ENSMUSG00000071604.6	ENSMUST00000096164.6	2548	11	-1	7	-1	-7	multi-exon	FALSE	canonical	3	34	junction_3	7.73627817493658	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGACTCCATGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	24008384	23950120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_23950996_23952724_23953018_23955325_23955479_23956753_23956833_23956949_23957080_23962072_23962207_23963772_23963881_23965810_23965940_23972144_23972256_23998969_23999027_24007911
tx.10275	chr19	-	4021	19	ISM	ENSMUSG00000024812.12	ENSMUST00000233027.2	4668	23	42848	-2	11741	2	3prime_fragment	FALSE	canonical	3	322	junction_16	32.6369857601184	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATGTGTGTATGAAT	NA	False	NA	NA	False	NA	NA	NA	24108705	24071866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218
tx.10276	chr19	-	4752	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-16	2	combination_of_known_junctions	TRUE	canonical	0	0	junction_23	82.6461699898347	497	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATGTGTGTATGAAT	NA	False	NA	NA	False	NA	NA	NA	24202410	24071866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
tx.10277	chr19	-	1033	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	14	67	14	-19	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	24257955	24238883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
tx.10278	chr19	-	2947	15	FSM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	-374	0	-374	0	multi-exon	FALSE	canonical	3	28	junction_9	5.473498303048	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTCATACATTGATTC	NA	False	NA	NA	False	NA	NA	NA	24533610	24272157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
tx.10279	chr19	-	2847	14	NIC	ENSMUSG00000024867.15	novel	2573	15	NA	NA	-389	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.5783924444472	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTCATACATTGATTC	NA	False	NA	NA	False	NA	NA	NA	24533625	24272157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_24272919_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
tx.1028	chr1	-	2291	11	FSM	ENSMUSG00000026670.16	ENSMUST00000027981.8	2283	11	-7	-1	4	0	multi-exon	FALSE	canonical	3	59	junction_3	76.9519330491444	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	NA	False	NA	NA	NA	170002522	169969570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_169970142_169970965_169971033_169975564_169975613_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
tx.10280	chr19	-	1930	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	-3	2	-3	-2	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATAGTGTGATGGTACT	NA	False	NA	NA	False	NA	NA	NA	24938968	24897281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
tx.10281	chr19	+	5561	14	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-247	2	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	13.2338994508254	35	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCCCTGCTTCATC	NA	False	NA	NA	False	NA	NA	NA	25214091	25411862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
tx.10282	chr19	+	5644	14	FSM	ENSMUSG00000032702.17	ENSMUST00000049400.15	5637	14	-6	-1	-6	1	multi-exon	FALSE	canonical	3	26	junction_1	16.8104644783043	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	25214332	25411861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_25214682_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
tx.10283	chr19	+	4345	10	ISM	ENSMUSG00000032702.17	ENSMUST00000049400.15	5637	14	172726	-1	3002	1	3prime_fragment	FALSE	canonical	3	61	junction_1	8.84433277428107	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	3454	False	NA	NA	False	NA	NA	NA	25387064	25411861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
tx.10284	chr19	+	2324	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	16	0	16	0	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	134	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	NA	False	NA	NA	NA	25482997	25581693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
tx.10285	chr19	+	2462	3	NIC	ENSMUSG00000042372.6	novel	2391	2	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	6	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGATGTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	25587610	25601285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_25587719_25587937_25588632_25599625
tx.10286	chr19	+	2425	2	FSM	ENSMUSG00000042372.6	ENSMUST00000048935.6	2391	2	-34	0	-34	0	multi-exon	FALSE	canonical	3	24	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGATGTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	25587866	25601285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_25588632_25599625
tx.10287	chr19	+	5941	34	FSM	ENSMUSG00000024921.18	ENSMUST00000176030.8	5862	34	-36	-43	31	-3	multi-exon	FALSE	canonical	2	6	junction_1	7.73172777101398	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGTCGCCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	26582482	26755718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26737277_26737332_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
tx.10288	chr19	+	5902	33	FSM	ENSMUSG00000024921.18	ENSMUST00000025862.15	5921	33	18	1	18	-1	multi-exon	FALSE	canonical	2	6	junction_1	7.35245494715881	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCGCCTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	26582469	26755720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
tx.10289	chr19	+	5991	33	NIC	ENSMUSG00000024921.18	novel	5913	33	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_10	6.89535339467819	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCTTTTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	26584691	26755721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_26584944_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
tx.1029	chr1	-	2311	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	-24	0	-13	0	multi-exon	FALSE	canonical	3	181	junction_3	44.8905335232274	223	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	NA	False	NA	NA	NA	170002539	169969570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
tx.10290	chr19	+	3878	19	FSM	ENSMUSG00000024924.15	ENSMUST00000167487.8	7971	19	-380	4473	-43	3	multi-exon	FALSE	canonical	3	7	junction_15	10.2837820299492	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTTTTGATTATTCCT	NA	False	NA	NA	False	NA	NA	NA	27194376	27227158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27223992_27224077_27224409_27224491_27225256_27225427_27226504
tx.10291	chr19	+	3748	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	4	103	4	4	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTTTGATTATTCCTC	NA	False	NA	NA	False	NA	NA	NA	27194423	27227159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
tx.10292	chr19	-	2083	17	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	2696	1355	-20	8	3prime_fragment	TRUE	canonical	3	1425	junction_9	73.1752765198055	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGTTTAATGTCAACT	NA	False	NA	-61	True	NA	NA	NA	27404529	27367452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436
tx.10293	chr19	-	2146	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-30	1355	-30	8	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	1462	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGTTTAATGTCAACT	NA	False	NA	NA	False	NA	NA	NA	27407255	27367452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
tx.10294	chr19	+	3787	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	12	1	12	-1	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCCTCTCATCTG	NA	False	NA	NA	False	NA	NA	NA	28812485	28891359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
tx.10295	chr19	+	4131	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	17	-69	2	69	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTCAGGTTTCGGTCTG	3838	False	NA	NA	False	NA	NA	NA	28967768	28993240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
tx.10296	chr19	+	6576	6	FSM	ENSMUSG00000024780.8	ENSMUST00000225210.2	4163	6	0	-2413	0	957	multi-exon	FALSE	canonical	3	165	junction_5	18.3019124683734	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGTCTGACTAATT	3836	False	NA	NA	False	NA	NA	NA	28967766	28994949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288
tx.10297	chr19	+	2644	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-131	2666	2	979	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGTGCTCACTGGCT	3838	False	NA	NA	False	NA	NA	NA	28967768	28994971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
tx.10298	chr19	-	6078	4	NIC	ENSMUSG00000024782.8	novel	2809	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	29	junction_3	6.37704215656966	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGGCTGTCTCCATGTT	NA	False	NA	NA	False	NA	NA	NA	29025365	28998232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_29003731_29004570_29004744_29015271_29015392_29025078
tx.10299	chr19	-	2802	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	7	0	7	0	multi-exon	FALSE	canonical	3	26	junction_1	7.58287544405155	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGGCTGTCTCCATGTT	NA	False	NA	NA	False	NA	NA	NA	29025354	28998232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
tx.103	chr1	+	5120	15	ISM	ENSMUSG00000073725.9	ENSMUST00000095062.10	5228	16	6470	0	6470	0	3prime_fragment	FALSE	canonical	3	113	junction_8	21.5824238770385	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGAGTTGATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	24724476	24805382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
tx.1030	chr1	-	2260	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	-13	64	-13	0	multi-exon	FALSE	canonical	3	102	junction_2	66.4981202741852	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	NA	False	NA	NA	NA	170002539	169969570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
tx.10300	chr19	+	1777	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	33	-7	33	7	multi-exon	TRUE	canonical	3	369	junction_1	16.9958634673264	371	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAGTGTAAATCAGAGT	NA	False	NA	NA	False	NA	NA	NA	29078807	29121250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
tx.10301	chr19	+	5236	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	-227	21	-227	-21	multi-exon	FALSE	canonical	3	14	junction_12	5.21749194749951	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGATTTTAAATATTTG	NA	False	NA	NA	False	NA	NA	NA	29229000	29290459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
tx.10302	chr19	+	4248	25	NNC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6.81794507164732	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTCTTTCTTGCTCA	NA	False	NA	NA	False	NA	NA	NA	29229174	29289740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29259944_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
tx.10303	chr19	-	845	6	FSM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	104	71	7	7	multi-exon	FALSE	canonical	3	35	junction_3	10.1390334845093	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTGTGTATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	29339266	29326069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29339196
tx.10304	chr19	-	1685	5	ISM	ENSMUSG00000016495.13	ENSMUST00000016639.12	1012	7	104	-6	7	6	intron_retention	FALSE	canonical	3	35	junction_3	10.4163333279998	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGGCAGTATTCTAAACA	NA	False	NA	NA	False	NA	NA	NA	29339266	29326098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216
tx.10305	chr19	+	6880	26	FSM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	-14	324	-14	-324	multi-exon	FALSE	canonical	3	11	junction_12	5.44558536798387	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTATTTTGCTGCA	227	False	NA	NA	False	NA	NA	NA	29499667	29583905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
tx.10306	chr19	+	5300	18	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-26	-8608	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	6.99629165242653	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTGGTCGCTTTAGAC	215	False	NA	NA	False	NA	NA	NA	29499655	29568689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565890_29566291
tx.10307	chr19	-	5071	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	13	1974	-12	14	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	847	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTTTTACAACTGCTT	NA	False	NA	NA	False	NA	NA	NA	29625802	29587587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
tx.10308	chr19	+	722	4	NNC	ENSMUSG00000024806.5	novel	906	5	NA	NA	5832	23	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	19.7709101684492	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTGGGCAGTAATGCA	NA	False	NA	NA	False	NA	NA	NA	29681165	29685849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_29681401_29682019_29682117_29684207_29684322_29685573
tx.10309	chr19	-	8547	8	FSM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	-1030	7	-548	-7	multi-exon	FALSE	canonical	3	13	junction_4	4.32364170012044	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGCCCCATGATTTC	3372	False	NA	NA	False	NA	NA	NA	29783937	29691808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
tx.1031	chr1	-	7871	8	FSM	ENSMUSG00000026667.15	ENSMUST00000027979.14	7864	8	-10	3	-10	-3	multi-exon	FALSE	canonical	3	88	junction_5	8.63311138842179	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCTCTCTTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	170042976	170020991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
tx.10310	chr19	-	7032	6	ISM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	50548	7	-1297	-7	3prime_fragment	FALSE	canonical	3	13	junction_4	4.4	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGCCCCATGATTTC	NA	False	NA	NA	False	NA	NA	NA	29732359	29691808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999
tx.10311	chr19	-	6960	7	FSM	ENSMUSG00000046138.16	ENSMUST00000177155.8	6632	7	-66	-262	-66	0	multi-exon	FALSE	canonical	1	2	junction_6	8.20568908339411	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	3854	False	NA	NA	False	NA	NA	NA	29783455	29692712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29782681
tx.10312	chr19	-	2739	3	ISM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	-1037	39341	-555	-33021	5prime_fragment	FALSE	canonical	3	16	junction_1	4	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGAAAGATGTTTTGA	3365	False	NA	NA	False	NA	NA	NA	29783944	29731142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_29732418_29763648_29763850_29782681
tx.10313	chr19	+	3597	16	FSM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	-57	-4	-57	4	multi-exon	FALSE	canonical	3	216	junction_4	27.709124048868	465	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4028	False	NA	NA	False	NA	NA	NA	30007855	30071126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
tx.10314	chr19	+	3976	3	FSM	ENSMUSG00000024817.14	ENSMUST00000134518.8	3231	3	-51	-694	-51	694	multi-exon	FALSE	canonical	3	253	junction_1	21.5	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGATGTTTTGCCTAT	4034	False	NA	NA	False	NA	NA	NA	30007861	30036906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_30008332_30016463_30016698_30033634
tx.10315	chr19	+	3621	6	ISM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	53779	-4	-1402	4	3prime_fragment	FALSE	canonical	3	255	junction_4	18.3847763108502	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	1309	False	NA	NA	False	NA	NA	NA	30061691	30071126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
tx.10316	chr19	-	3784	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	-17	0	-17	0	multi-exon	FALSE	canonical	1	455	junction_4	183.478351735445	2833	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAATTTCCCATTTGATT	NA	False	NA	NA	False	NA	NA	NA	30152846	30075846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
tx.10317	chr19	-	3369	7	NNC	ENSMUSG00000040451.19	novel	4036	10	NA	NA	-3449	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	60.6538447988987	79	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	4127	False	NA	NA	False	NA	NA	NA	32219675	32100129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219462
tx.10318	chr19	-	3242	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	18	2	18	0	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	8037	False	NA	NA	False	NA	NA	NA	32188395	32100129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
tx.10319	chr19	-	3357	7	NNC	ENSMUSG00000040451.19	novel	4036	10	NA	NA	-3478	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	68.5362839831736	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	4098	False	NA	NA	False	NA	NA	NA	32219704	32100129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219503
tx.1032	chr1	+	3129	8	FSM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	-39	5	-39	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305394	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCCCGGCTCATTTTC	NA	False	NA	NA	False	NA	NA	NA	170472061	170510353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140_170494367_170496319_170496833_170508605_170508783_170509292
tx.10320	chr19	-	3627	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	35	3	-14	0	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	8366	False	NA	NA	False	NA	NA	NA	32365877	32100129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
tx.10321	chr19	+	2477	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	126	10	-28	-10	multi-exon	FALSE	canonical	3	240	junction_4	28.9687331445474	557	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAAGTCATCTCTGCAC	NA	False	NA	NA	False	NA	NA	NA	32463294	32492754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
tx.10322	chr19	-	2849	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	1	921	1	263	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	565	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGCACTGAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	32689730	32649958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
tx.10323	chr19	-	5195	9	FSM	ENSMUSG00000013662.7	ENSMUST00000237752.2	2269	9	-31	-2895	3	259	multi-exon	FALSE	canonical	3	346	junction_1	45.866654554262	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATTACAGCACTGAATT	NA	False	NA	NA	False	NA	NA	NA	32689728	32649962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
tx.10324	chr19	-	2781	10	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	-21	259	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	136.12584954218	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATTACAGCACTGAATT	NA	False	NA	NA	False	NA	NA	NA	32689752	32649962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675925_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
tx.10325	chr19	+	5357	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	99	2836	1	-2836	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGTGTTTTATTAA	7692	False	NA	NA	False	NA	NA	NA	32734995	32800724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
tx.10326	chr19	-	1622	7	FSM	ENSMUSG00000071573.15	ENSMUST00000096114.13	1597	7	-22	-3	8	3	multi-exon	FALSE	canonical	2	11	junction_4	3.8151743807532	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTTTTATAGCCTCACA	NA	False	NA	NA	False	NA	NA	NA	33369687	33115143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_33115675_33145721_33145898_33179874_33180049_33359766_33359926_33367316_33367460_33368479_33368586_33369354
tx.10327	chr19	-	2754	11	FSM	ENSMUSG00000024766.16	ENSMUST00000112508.9	2839	11	84	1	84	-1	multi-exon	FALSE	canonical	3	39	junction_5	12.3109707172099	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCTGTTTCTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	33567624	33532560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
tx.10328	chr19	-	2606	10	NIC	ENSMUSG00000024766.16	novel	2839	11	NA	NA	93	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	21.3148067702788	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTTCTGTTTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	33567615	33532562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
tx.10329	chr19	+	1997	11	FSM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	-11	2	-11	0	multi-exon	FALSE	canonical	3	29	junction_1	14.1918990977247	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCGGTTGTCACATTT	NA	False	NA	NA	False	NA	NA	NA	34169617	34217731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
tx.1033	chr1	-	4522	16	NNC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	0	-2721	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	17.5630926155453	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTTAACTTCGCTTA	NA	False	NA	NA	False	NA	NA	NA	170695340	170534963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_170537657_170574674_170574760_170614914_170615027_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
tx.10330	chr19	+	2021	11	FSM	ENSMUSG00000024776.19	ENSMUST00000054956.15	2024	11	-2	5	-2	-3	multi-exon	FALSE	canonical	3	23	junction_1	15.5630973780928	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGTCCGGTTGTCACA	NA	False	NA	NA	False	NA	NA	NA	34169626	34217728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_34170032_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
tx.10331	chr19	-	2966	10	FSM	ENSMUSG00000024781.17	ENSMUST00000049572.15	2969	10	5	-2	5	2	multi-exon	FALSE	canonical	3	30	junction_9	6.37704215656966	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGGTGTGGTGTTTGCTT	5920	False	NA	NA	False	NA	NA	NA	34504869	34469715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502247_34504765
tx.10332	chr19	-	6010	5	ISM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	52203	-2	50597	2	3prime_fragment	FALSE	canonical	3	103	junction_2	14.7372826531895	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGACTCTTTCTT	7375	False	NA	NA	False	NA	NA	NA	34804652	34784337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519
tx.10333	chr19	-	3265	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	195	3954	195	0	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	NA	False	NA	NA	False	NA	NA	NA	34856660	34788293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
tx.10334	chr19	-	3088	6	NIC	ENSMUSG00000033610.17	novel	7414	7	NA	NA	195	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	44.4639179560236	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	NA	False	NA	NA	False	NA	NA	NA	34856660	34788293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_34789788_34791091_34791218_34798499_34798624_34804519_34804774_34818156_34818510_34855923
tx.10335	chr19	+	5579	32	FSM	ENSMUSG00000024795.12	ENSMUST00000087341.7	5564	32	-2	-13	-2	3	multi-exon	FALSE	canonical	3	97	junction_15	68.2854387453211	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTCTTAAACTTTT	NA	False	NA	NA	False	NA	NA	NA	34899758	34953148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
tx.10336	chr19	+	1149	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-13	9	2	-9	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	395	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTACATATGGATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	36061117	36082168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
tx.10337	chr19	+	6439	9	FSM	ENSMUSG00000024805.17	ENSMUST00000225920.2	6443	9	-2	6	-2	-6	multi-exon	FALSE	canonical	3	10	junction_1	36.9382931386928	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGTTGGCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	36325706	36438364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
tx.10338	chr19	+	1969	10	NIC	ENSMUSG00000024805.17	novel	6443	9	NA	NA	-1	231	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	38.9580337679114	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTTACTGTCTTAGG	NA	False	NA	NA	False	NA	NA	NA	36325707	36433835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
tx.10339	chr19	+	1929	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	-59	-244	-59	232	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTTACTGTCTTAGGC	NA	False	NA	NA	False	NA	NA	NA	36387088	36433836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
tx.1034	chr1	-	4523	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	0	2723	0	-2723	multi-exon	FALSE	canonical	3	52	junction_10	11.1705963234835	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGGTTAACTTCGCT	NA	False	NA	NA	False	NA	NA	NA	170695340	170534965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
tx.10340	chr19	+	1605	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	-23	-16	-23	4	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCTTATTCTTGAGTG	NA	False	NA	NA	False	NA	NA	NA	36387124	36433608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
tx.10341	chr19	+	6487	9	NNC	ENSMUSG00000024805.17	novel	430	5	NA	NA	252	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	38.6328875441637	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGTTGGCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	36387399	36438364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_36387711_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
tx.10342	chr19	+	4759	21	FSM	ENSMUSG00000041180.14	ENSMUST00000169036.9	3842	21	-30	-887	-1	-3	multi-exon	FALSE	canonical	3	14	junction_10	5.91840350094516	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCTTCAGTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	36532037	36598529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
tx.10343	chr19	-	2765	2	NNC	ENSMUSG00000067279.4	novel	2725	2	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGAATGTTTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	36714084	36709130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_36711755_36713943
tx.10344	chr19	+	5706	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-3	-589	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	470	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGGTAATTCATTGAAA	NA	False	NA	NA	False	NA	NA	NA	36811628	36870288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
tx.10345	chr19	+	5894	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	-3	590	-3	-590	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	36811628	36870287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
tx.10346	chr19	-	376	2	Antisense	novelGene_ENSMUSG00000024811.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATCTTTATTAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	36875272	36864634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr19_-_36864807_36875068
tx.10347	chr19	+	7165	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	46	-7	46	7	multi-exon	TRUE	canonical	3	111	junction_9	14.2774858907343	194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTGTGTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	36903524	36990159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
tx.10348	chr19	+	1798	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	14	-3	-14	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	628	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCTCATAGTTCATAGT	NA	False	NA	NA	False	NA	NA	NA	37184938	37199536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
tx.10349	chr19	+	4788	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	-13	intron_retention	FALSE	canonical	3	710	junction_1	39.0672497112351	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTCATAGTTCATAGTG	NA	False	NA	NA	False	NA	NA	NA	37184938	37199537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_37185304_37188069_37188273_37194581_37197886_37198037_37198205_37198788
tx.1035	chr1	-	1276	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	98	0	15	0	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	NA	False	NA	NA	NA	170713011	170701756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
tx.10350	chr19	-	5216	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-55	0	at_least_one_novel_splicesite	TRUE	canonical	3	46	junction_24	212.273385990802	67	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	37340065	37246141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
tx.10351	chr19	-	5119	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-60	0	-60	0	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	1306	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	37340070	37246141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
tx.10352	chr19	-	5253	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	228.621209864702	67	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	37340070	37246141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37326422_37326557_37339912
tx.10353	chr19	+	4869	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-50	0	-50	0	multi-exon	TRUE	canonical	3	280	junction_17	34.0452546631592	679	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	NA	False	NA	NA	NA	37364800	37410307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
tx.10354	chr19	+	1828	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	-34	8	-34	-8	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGAGCCTTGGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	37423223	37429171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
tx.10355	chr19	+	3534	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	-5	14	-5	-14	multi-exon	FALSE	canonical	3	69	junction_16	11.2298193902402	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTCTTTCAGCTATTCG	1864	False	NA	NA	False	NA	NA	NA	37538860	37672493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
tx.10356	chr19	-	6762	53	NIC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-14	-3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_15	30.1745109234177	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGATGTTTGTCCTCTA	8842	False	NA	NA	False	NA	NA	NA	38031861	37887678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
tx.10357	chr19	-	6809	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.0334055731897	36	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8857	False	NA	NA	False	NA	NA	NA	38031846	37887679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913159_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
tx.10358	chr19	-	6751	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.1745109234177	117	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8856	False	NA	NA	False	NA	NA	NA	38031847	37887679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
tx.10359	chr19	+	2535	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	84.0640555296898	97	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	38043453	38062871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
tx.1036	chr1	-	1314	3	FSM	ENSMUSG00000059498.14	ENSMUST00000168817.2	1298	3	-17	1	-17	0	multi-exon	FALSE	canonical	3	151	junction_2	7.5	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATCTCCTTTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	170885640	170878743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_170879422_170881507_170881763_170885259
tx.10360	chr19	+	2440	10	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	90.951078967938	35	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	38043458	38062871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_38043530_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
tx.10361	chr19	+	2554	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_2	88.367917758024	70	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	38043458	38062871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_38043530_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
tx.10362	chr19	+	5039	8	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-13	0	intron_retention	FALSE	canonical	3	299	junction_1	30.684703361906	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	38043523	38062871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
tx.10363	chr19	+	1585	3	FSM	ENSMUSG00000054200.8	ENSMUST00000067098.8	1401	3	-184	0	-184	0	multi-exon	FALSE	canonical	2	4	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATCTCTATCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	38085334	38102711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_38086142_38095829_38095959_38102062
tx.10364	chr19	-	966	6	FSM	ENSMUSG00000024990.14	ENSMUST00000112335.4	937	6	-25	-4	-25	3	multi-exon	FALSE	canonical	3	6	junction_5	4.31740662898458	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATGAGTTGAAGACTTA	5184	False	NA	NA	False	NA	NA	NA	38113301	38105073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_38105358_38106719_38106933_38112476_38112584_38112743_38112881_38112966_38113096_38113205
tx.10365	chr19	-	1399	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	3	0	3	0	multi-exon	FALSE	canonical	3	295	junction_2	36.3583414649629	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	38212583	38176928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
tx.10366	chr19	-	1488	14	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	-1	4	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_13	98.2574206360984	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGAGTCTTTCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	38212605	38176924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210425_38212409
tx.10367	chr19	-	962	9	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	0	16055	0	7	5prime_fragment	FALSE	canonical	3	315	junction_8	31.196954979613	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCATTATGGAAGCGCT	NA	False	NA	NA	False	NA	NA	NA	38212586	38192983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
tx.10368	chr19	+	3658	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	-184	0	-184	0	multi-exon	FALSE	canonical	3	381	junction_1	3	851	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	NA	False	NA	NA	NA	38384243	38394058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_38384750_38388881_38389063_38391087
tx.10369	chr19	+	3351	3	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	189.5	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	NA	False	NA	NA	NA	38384478	38394058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_38384750_38388953_38389063_38391087
tx.1037	chr1	-	1172	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	0	1999	0	243	multi-exon	TRUE	canonical	3	578	junction_5	147.434866975217	235	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	NA	False	NA	NA	NA	170978172	170956732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
tx.10370	chr19	+	3446	2	NIC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	-153	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	NA	False	NA	NA	NA	38384274	38394058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_38384750_38391087
tx.10371	chr19	+	8835	32	FSM	ENSMUSG00000024998.18	ENSMUST00000169713.9	9439	32	206	398	194	-398	multi-exon	FALSE	canonical	1	8	junction_10	4.96145391734978	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAATAATAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	38512846	38773076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
tx.10372	chr19	-	3954	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	23	0	23	0	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	383	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTAGTCTTACGAGGTT	2311	False	NA	NA	False	NA	NA	NA	38807658	38776571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
tx.10373	chr19	+	3934	13	FSM	ENSMUSG00000048720.9	ENSMUST00000037302.6	4209	13	13	262	13	223	multi-exon	FALSE	canonical	3	18	junction_10	4.85555237731907	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAAAATGAGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	38825035	38908105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
tx.10374	chr19	+	5241	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	42	585	42	-585	multi-exon	TRUE	canonical	3	1554	junction_5	143.18806117019	2835	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTGTTAATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	38919400	38958910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
tx.10375	chr19	+	5381	22	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	45	-585	combination_of_known_junctions	TRUE	canonical	3	40	junction_1	400.999024546288	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTGTTAATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	38919403	38958910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_38919663_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
tx.10376	chr19	+	5347	21	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	261	575	2	-575	3prime_fragment	FALSE	canonical	3	1554	junction_4	146.69625080417	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTTTTGAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	38919619	38958920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
tx.10377	chr19	+	4693	15	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	12797	573	23	-573	3prime_fragment	FALSE	canonical	3	1637	junction_4	114.586501502274	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTTTGAGAAGCTTA	761	False	NA	NA	False	NA	NA	NA	38932155	38958922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
tx.10378	chr19	-	1449	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	56	1066	56	124	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACCTCTTAGTTGAC	NA	False	NA	NA	False	NA	NA	NA	40260004	40210682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
tx.10379	chr19	-	5361	24	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	0	2713	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	19.5313716914923	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9860	False	NA	NA	False	NA	NA	NA	40502223	40280483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
tx.1038	chr1	-	1542	3	FSM	ENSMUSG00000038370.7	ENSMUST00000111332.2	1577	3	33	2	33	-2	multi-exon	FALSE	canonical	1	2	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGAGTGGTTTGTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	171023804	171000832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171002095_171003138_171003194_171023579
tx.10380	chr19	-	5264	22	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	6	2712	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	18.3974759187614	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9866	False	NA	NA	False	NA	NA	NA	40502217	40280484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
tx.10381	chr19	-	5684	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-11	2711	intron_retention	FALSE	canonical	3	14	junction_4	21.6767801513871	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTGTGTTCTCTTCCT	9877	False	NA	NA	False	NA	NA	NA	40502206	40280485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
tx.10382	chr19	-	3452	19	FSM	ENSMUSG00000025007.14	ENSMUST00000025979.13	3527	19	75	0	-4	0	multi-exon	FALSE	canonical	3	945	junction_12	98.5252364738204	2361	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	40576832	40538700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
tx.10383	chr19	-	2743	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGACTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	40600677	40584889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
tx.10384	chr19	+	3843	6	FSM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	-28	4	-28	-4	multi-exon	FALSE	canonical	3	13	junction_4	5.32916503778969	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGTCTTGCTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	40819694	40837012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833488_40833649_40834142
tx.10385	chr19	+	6936	5	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	-546	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	40.2453413453036	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	40882602	40906386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_40882790_40885527_40885610_40896502_40896648_40899476_40899554_40899941
tx.10386	chr19	+	6836	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	-1	5	-1	-1	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	40883147	40906386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
tx.10387	chr19	-	3220	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-50	0	-33	0	multi-exon	TRUE	canonical	3	1017	junction_13	71.1689926176006	1832	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	NA	False	NA	NA	NA	41252469	41202230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
tx.10388	chr19	-	3046	6	ISM	ENSMUSG00000025017.11	ENSMUST00000059672.9	4482	17	88176	-15	88176	15	3prime_fragment	FALSE	canonical	2	5	junction_4	1.6	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAGTGCTTTTTGAGGA	NA	False	NA	NA	False	NA	NA	NA	41285359	41260800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_41262793_41270309_41270447_41271518_41271590_41275908_41276065_41281191_41281265_41284742
tx.10389	chr19	+	6422	8	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	11	792	intron_retention	FALSE	canonical	3	26	junction_7	29.110626434836	50	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGTGACTCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	41471086	41575767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
tx.1039	chr1	-	1449	10	NIC	ENSMUSG00000005674.10	novel	4712	10	NA	NA	0	-748	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	36.8945778745768	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGGTTTCTCCATT	9572	False	NA	NA	False	NA	NA	NA	171050020	171046679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049623_171049943
tx.10390	chr19	+	2025	5	ISM	ENSMUSG00000025019.18	ENSMUST00000067795.13	4833	8	12	14717	12	-11624	5prime_fragment	FALSE	canonical	3	83	junction_3	9.51314879522022	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGTTCCTTAATTACA	NA	False	NA	NA	False	NA	NA	NA	41471087	41535983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313
tx.10391	chr19	+	5910	5	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	11	795	intron_retention	FALSE	canonical	1	3	junction_4	41.0510353097215	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACTCTTGTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	41471086	41575770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41570216
tx.10392	chr19	-	5109	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	-7	1	-7	-1	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	618	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTCTGACTGGT	4520	False	NA	NA	False	NA	NA	NA	41790493	41755027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
tx.10393	chr19	-	5065	12	FSM	ENSMUSG00000025154.16	ENSMUST00000177495.2	1652	12	-8	-3405	-8	-1	multi-exon	FALSE	canonical	3	21	junction_5	104.114844409653	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTCTGACTGGT	4519	False	NA	NA	False	NA	NA	NA	41790494	41755027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769744_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
tx.10394	chr19	-	4371	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	-24	-7	-24	7	multi-exon	TRUE	canonical	3	269	junction_16	39.9184430265499	939	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCTTGGCCCCTTCC	NA	False	NA	NA	False	NA	NA	NA	41884636	41851282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
tx.10395	chr19	+	1771	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	5	-1	5	1	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	3066	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTTTGTCTTGTGTC	4065	False	NA	NA	False	NA	NA	NA	41900366	41907100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
tx.10396	chr19	-	1132	7	ISM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	5	-32	5	32	intron_retention	FALSE	canonical	3	831	junction_4	54.234060638434	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	41921730	41911972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487
tx.10397	chr19	-	4355	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-9	2141	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	328.565569305935	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTTAAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	41921746	41908589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41919794_41919870_41921487_41921604_41921690
tx.10398	chr19	-	1613	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-11	-584	-9	584	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	355	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGTTTAGTGAAAAC	NA	False	NA	NA	False	NA	NA	NA	41921746	41911420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
tx.10399	chr19	+	1747	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	126.333091468546	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTAGCTTCTCTGTGC	4139	False	NA	NA	False	NA	NA	NA	41921928	41932539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_41922105_41923246_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
tx.104	chr1	-	4995	13	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	18	488	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	43.8180423265729	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTTCTCAAGACATT	NA	False	NA	NA	False	NA	NA	NA	30912957	30842138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30912658
tx.1040	chr1	-	1550	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	62	3100	-1	-748	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGGTTTCTCCATT	9571	False	NA	NA	False	NA	NA	NA	171050021	171046679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
tx.10400	chr19	+	1912	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_5	120.241631725455	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTAGCTTCTCTGTGCCT	4131	False	NA	NA	False	NA	NA	NA	41921920	41932541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927161_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
tx.10401	chr19	+	1872	12	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	79	junction_8	134.380796050282	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTAGCTTCTCTGTGC	4132	False	NA	NA	False	NA	NA	NA	41921921	41932539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
tx.10402	chr19	+	1824	11	FSM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	-6	3	4	-3	multi-exon	FALSE	canonical	3	323	junction_7	37.0513157661101	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTAGCTTCTCTGTGCC	4133	False	NA	NA	False	NA	NA	NA	41921922	41932540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
tx.10403	chr19	-	3474	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	18	3115	0	4	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	NA	False	NA	NA	NA	41969578	41932639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
tx.10404	chr19	-	3471	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	137	junction_15	29.8713723971445	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	NA	False	NA	NA	NA	41969578	41932639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
tx.10405	chr19	+	1795	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	-262	-4	-262	4	multi-exon	FALSE	canonical	3	94	junction_1	5.5	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCACATGACTTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	41969939	42023086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_41970448_42020327_42020556_42022027
tx.10406	chr19	-	1803	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	-3	0	-3	0	multi-exon	FALSE	canonical	2	63	junction_4	19.0574788468989	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4137	False	NA	NA	False	NA	NA	NA	42074799	42063380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
tx.10407	chr19	-	1913	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_4	34.0258725090188	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4142	False	NA	NA	False	NA	NA	NA	42074794	42063380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067100_42067216_42074635
tx.10408	chr19	-	1905	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	36.2745089560148	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGTTATGAACTTTC	4134	False	NA	NA	False	NA	NA	NA	42074802	42063379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067117_42067216_42074635
tx.10409	chr19	+	3571	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	-23	56	-22	0	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	918	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGTCCAGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	42078886	42110470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
tx.1041	chr1	+	556	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3187	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	24.4176620957499	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGCCTCTTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	171049435	171053942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_171049548_171052855_171052936_171053234_171053368_171053711
tx.10410	chr19	-	1023	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	19	2	19	-2	multi-exon	FALSE	canonical	3	851	junction_1	12	313	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGTCAGAGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	42117479	42111713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_42112288_42113186_42113466_42117309
tx.10411	chr19	-	858	2	ISM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	4030	0	3960	0	3prime_fragment	FALSE	canonical	3	851	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCAGAGTGTGCTAC	NA	False	NA	NA	False	NA	NA	NA	42113468	42111711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_42112288_42113186
tx.10412	chr19	+	3065	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	-4	5	-4	-5	multi-exon	FALSE	canonical	3	88	junction_1	0	230	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTGGGTCTCACG	NA	False	NA	NA	False	NA	NA	NA	42135834	42140137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_42137999_42139236
tx.10413	chr19	+	2579	12	FSM	ENSMUSG00000018820.14	ENSMUST00000099443.11	2573	12	-5	-1	-5	1	multi-exon	FALSE	canonical	3	55	junction_1	33.3877792261314	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	NA	False	NA	NA	NA	42159027	42180157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
tx.10414	chr19	+	4317	11	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-4	8	intron_retention	FALSE	canonical	3	125	junction_1	17.592327873252	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGTCTCCTAGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	42159028	42180164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
tx.10415	chr19	+	2695	12	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	17.7223769463382	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCAGGTCTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	42159030	42180159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
tx.10416	chr19	-	1820	3	FSM	ENSMUSG00000018822.8	ENSMUST00000018966.8	1900	3	72	8	72	-8	multi-exon	FALSE	canonical	2	12	junction_1	0.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTAATTTCTTTATCCA	NA	False	NA	NA	False	NA	NA	NA	42190619	42186417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_42187471_42188219_42188298_42189930
tx.10417	chr19	-	2610	15	FSM	ENSMUSG00000042401.9	ENSMUST00000048630.8	2618	15	-1	9	1	-9	multi-exon	FALSE	canonical	3	19	junction_14	18.8128538342208	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTGCTAAGTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	42420223	42271482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
tx.10418	chr19	-	1748	10	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-19205	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	18.8325958557674	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTTCCAGCCTCTTT	2486	False	NA	NA	False	NA	NA	NA	42295598	42271474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42295464
tx.10419	chr19	+	3111	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	28	973	-11	360	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATGGTGTTTATAAAT	NA	False	NA	NA	False	NA	NA	NA	42507225	42579809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
tx.1042	chr1	-	1609	13	FSM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	9	5	9	-5	multi-exon	FALSE	canonical	3	1142	junction_12	107.460457843804	795	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCTTGTAATGTGTCT	NA	False	NA	NA	False	NA	NA	NA	171074682	171062426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
tx.10420	chr19	+	3041	6	ISM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	43792	973	-1690	360	3prime_fragment	FALSE	canonical	3	76	junction_2	7.93977329651168	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATGGTGTTTATAAAT	51	False	NA	NA	False	NA	NA	NA	42550989	42579809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
tx.10421	chr19	-	5462	15	FSM	ENSMUSG00000025185.15	ENSMUST00000026190.14	3738	15	-20	-1704	-20	1704	multi-exon	TRUE	canonical	1	2	junction_12	2.28124563181019	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAGTCCTTGGTATTT	NA	False	NA	NA	False	NA	NA	NA	42601272	42580716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42601156
tx.10422	chr19	-	2885	20	NIC	ENSMUSG00000025188.16	novel	2952	20	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_19	27.100714999103	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	42768370	42743634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768176
tx.10423	chr19	-	2741	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	15	91	2	0	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	42768402	42743634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
tx.10424	chr19	+	5047	11	FSM	ENSMUSG00000025189.10	ENSMUST00000165311.3	5037	11	-11	1	-11	-1	multi-exon	FALSE	canonical	2	3	junction_6	3.04795013082563	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGCTGCTTTGCTTGCCC	NA	False	NA	NA	False	NA	NA	NA	43428863	43485648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_43430457_43453559_43453704_43456679_43456821_43458047_43458218_43460287_43460388_43460815_43460864_43473283_43473448_43479859_43480044_43480202_43480353_43482148_43482251_43483397
tx.10425	chr19	-	1996	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	59	3	59	-3	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	922	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTGTGATCCAT	8376	False	NA	NA	False	NA	NA	NA	43512985	43488193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
tx.10426	chr19	-	1548	4	FSM	ENSMUSG00000040414.9	ENSMUST00000046038.9	1535	4	-13	0	-13	0	multi-exon	FALSE	canonical	3	130	junction_2	77.3146529162199	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	43663333	43652239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_43653083_43654210_43654268_43655353_43655583_43662914
tx.10427	chr19	-	2635	3	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-14	0	intron_retention	FALSE	canonical	3	293	junction_1	1	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	43663334	43652239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_43653083_43654210_43655583_43662914
tx.10428	chr19	-	3762	2	FSM	ENSMUSG00000040414.9	ENSMUST00000235953.2	3724	2	-34	-4	-13	0	multi-exon	FALSE	canonical	3	295	junction_1	0	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	43663333	43652239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_43655583_43662914
tx.10429	chr19	+	4776	13	FSM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	114	1021	-23	-1021	multi-exon	FALSE	canonical	2	4	junction_9	3.63623737154524	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATTAGTCTTTGAGTT	2753	False	NA	NA	False	NA	NA	NA	43678224	43721115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187_43710355_43713652_43713978_43715281_43715368_43716428_43716591_43718136
tx.1043	chr1	+	4827	4	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	223	junction_2	6.23609564462324	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGTGATTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	171097904	171104468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_171101714_171101835_171101959_171103454_171103560_171103678
tx.10430	chr19	-	2917	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	20	1861	20	-1861	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	730	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGCTAACCCAGGATTT	NA	False	NA	NA	False	NA	NA	NA	43741419	43723553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
tx.10431	chr19	-	5013	2	ISM	ENSMUSG00000025195.10	ENSMUST00000212592.2	3901	14	28819	-2382	28819	2381	3prime_fragment	FALSE	canonical	3	52	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGTATACGACACAGCGT	NA	False	NA	NA	False	NA	NA	NA	43839388	43832878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_43836718_43838214
tx.10432	chr19	-	3903	13	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	21.3574082905415	77	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTGTGTTTCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	43868215	43835258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43868051
tx.10433	chr19	-	5032	13	NNC	ENSMUSG00000025195.10	novel	4186	14	NA	NA	91	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	21.190930974253	50	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTTTCCTTCATCT	748	False	NA	NA	False	NA	NA	NA	43879039	43835256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43877748
tx.10434	chr19	-	6101	16	NNC	ENSMUSG00000025195.10	novel	6100	16	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.2313737680338	9	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTGTTTCCTTCATC	NA	False	NA	NA	False	NA	NA	NA	43928649	43835257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43889508_43891498_43899163_43899287_43900673_43900829_43928555
tx.10435	chr19	-	1621	9	FSM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	204	3	204	-3	multi-exon	FALSE	canonical	3	15	junction_8	10.3191266587827	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTGCCACTTGCATG	6066	False	NA	NA	False	NA	NA	NA	43974791	43944748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241_43969439_43974504
tx.10436	chr19	-	1333	8	ISM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	5558	3	5558	-3	3prime_fragment	FALSE	canonical	3	24	junction_2	8.50929863533453	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTGCCACTTGCATG	NA	False	NA	NA	False	NA	NA	NA	43969437	43944748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241
tx.10437	chr19	-	3224	12	FSM	ENSMUSG00000025198.17	ENSMUST00000071698.13	3228	12	2	2	2	-2	multi-exon	FALSE	canonical	3	64	junction_11	39.5783562189201	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTGTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	44058212	44023384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058027
tx.10438	chr19	-	3119	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	15	2	5	-2	multi-exon	TRUE	canonical	3	111	junction_11	27.8217466521579	229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTGTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	44058209	44023384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
tx.10439	chr19	-	3389	11	FSM	ENSMUSG00000025198.17	ENSMUST00000170801.8	3172	11	-220	3	-2	-3	multi-exon	FALSE	canonical	3	157	junction_6	17.066048165876	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGTGTGTGTTCTATT	NA	False	NA	NA	False	NA	NA	NA	44058185	44023385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710
tx.1044	chr1	-	3312	9	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	1	0	intron_retention	TRUE	canonical	3	87	junction_7	17.1386806668425	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5190	False	NA	NA	False	NA	NA	NA	171108759	171104564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
tx.10440	chr19	-	3354	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	113	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_20	73.0809653740288	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	NA	False	NA	NA	NA	44095608	44061773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095546
tx.10441	chr19	-	3389	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	95	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_20	66.1814739938603	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	NA	False	NA	NA	NA	44095626	44061773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095546
tx.10442	chr19	-	3473	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	9	-1	1	0	multi-exon	FALSE	canonical	3	113	junction_2	45.2515193115104	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	NA	False	NA	NA	NA	44095907	44061773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
tx.10443	chr19	-	3490	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	12	0	1	0	multi-exon	FALSE	canonical	3	185	junction_2	31.5901883501824	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	NA	False	NA	NA	NA	44095907	44061773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
tx.10444	chr19	-	2167	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	38.4159730092643	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCTTATGTTGCTTA	NA	False	NA	NA	False	NA	NA	NA	44124299	44098457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
tx.10445	chr19	-	2787	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	16	778	1	1	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTTTCCACCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	44124299	44097853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
tx.10446	chr19	-	1790	3	ISM	ENSMUSG00000025200.8	ENSMUST00000235288.2	1470	7	8249	-605	-1122	0	3prime_fragment	FALSE	canonical	3	162	junction_2	0.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCTTTTCCACCTGGCC	4910	False	NA	NA	False	NA	NA	NA	44102559	44097854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_44099100_44101387_44101486_44102112
tx.10449	chr19	-	887	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	11	-13	-5	0	multi-exon	FALSE	canonical	3	1199	junction_4	51.0165414351071	298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	974	False	NA	NA	False	NA	NA	NA	44134874	44127684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
tx.1045	chr1	-	2178	13	FSM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	37	4	1	0	multi-exon	FALSE	non_canonical	0	0	junction_3	116.920794652714	506	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTCATGTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	171115527	171109522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
tx.10450	chr19	-	2360	11	ISM	ENSMUSG00000037578.5	ENSMUST00000042026.5	3321	15	36439	0	36439	0	3prime_fragment	FALSE	canonical	3	31	junction_9	13.2003787824441	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTGCATTTCCTTCTG	1998	False	NA	NA	False	NA	NA	NA	44144442	44136075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279
tx.10451	chr19	-	2806	11	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35291	0	intron_retention	FALSE	canonical	3	31	junction_8	12.458330546265	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTGCATTTCCTTCTG	850	False	NA	NA	False	NA	NA	NA	44145590	44136075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
tx.10452	chr19	-	2513	12	ISM	ENSMUSG00000037578.5	ENSMUST00000042026.5	3321	15	35300	0	35300	0	3prime_fragment	FALSE	canonical	3	31	junction_9	12.7694107632134	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTGCATTTCCTTCTG	859	False	NA	NA	False	NA	NA	NA	44145581	44136075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
tx.10453	chr19	+	2901	3	FSM	ENSMUSG00000025202.9	ENSMUST00000237324.2	655	3	-254	-1992	-254	-6	multi-exon	FALSE	canonical	3	31	junction_1	4	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCAGCATCTGGCTCCA	NA	False	NA	NA	False	NA	NA	NA	44225999	44232449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_44226317_44226814_44227048_44230098
tx.10454	chr19	+	5068	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	387	0	-15	0	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	5809	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1454	False	NA	NA	False	NA	NA	NA	44282499	44295303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
tx.10455	chr19	-	4433	5	ISM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	1024	0	5	0	3prime_fragment	FALSE	canonical	3	439	junction_3	180.524236599965	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	8464	False	NA	NA	False	NA	NA	NA	44395124	44382893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925
tx.10456	chr19	-	4960	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	-128	0	42	0	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	947	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	7312	False	NA	NA	False	NA	NA	NA	44396276	44382893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
tx.10457	chr19	-	4851	25	FSM	ENSMUSG00000051984.14	ENSMUST00000111985.2	3548	25	-8	-1295	-8	1045	multi-exon	TRUE	canonical	2	5	junction_17	4.98051759916131	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCTCCTCTGCATCCT	NA	False	NA	NA	False	NA	NA	NA	44534294	44504350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520732_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44532139_44532252_44534226
tx.10458	chr19	-	654	5	FSM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	15	11	1	2	multi-exon	FALSE	canonical	3	4404	junction_1	502.944517317765	986	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGGTTTCTGTGTCT	1989	False	NA	NA	False	NA	NA	NA	44543864	44538689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543755
tx.10459	chr19	+	6196	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATGTGACTTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	44551286	44564713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
tx.1046	chr1	-	978	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	29	0	-8	0	multi-exon	FALSE	canonical	3	257	junction_6	130.826539101718	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7312	False	NA	NA	False	NA	NA	NA	171122568	171116135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
tx.10460	chr19	+	6833	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	11	-595	-1	484	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGTCTGGCAACTTTT	1054	False	NA	NA	False	NA	NA	NA	44919600	44972222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
tx.10461	chr19	+	5548	16	FSM	ENSMUSG00000036097.9	ENSMUST00000236057.2	3831	16	-306	-1411	-306	487	multi-exon	FALSE	canonical	3	153	junction_7	22.4950364895607	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGCAACTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	44930063	44972225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
tx.10462	chr19	-	2350	2	FSM	ENSMUSG00000025208.10	ENSMUST00000235259.2	515	2	4	-1839	4	856	multi-exon	FALSE	canonical	3	515	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44994855	44992411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44994609_44994702
tx.10463	chr19	-	1257	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	20	121	-2	-121	multi-exon	FALSE	canonical	3	460	junction_1	27.5	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	44994861	44993388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_44994380_44994501_44994609_44994702
tx.10464	chr19	+	4454	4	ISM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	833	0	-62	0	3prime_fragment	FALSE	canonical	3	153	junction_1	12.2836838484589	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2491	False	NA	NA	False	NA	NA	NA	44994934	45001201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_44997960_44998570_44998679_44998856_44998999_45000022
tx.10465	chr19	+	3548	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	-60	0	-60	0	multi-exon	FALSE	canonical	3	97	junction_1	30.3593066455741	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2493	False	NA	NA	False	NA	NA	NA	44994936	45001201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
tx.10466	chr19	+	3283	5	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	69.0954955116468	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2511	False	NA	NA	False	NA	NA	NA	44994954	45001201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_44996568_44997718_44997960_44998570_44998679_44998856_44998999_45000022
tx.10467	chr19	+	2788	5	FSM	ENSMUSG00000035342.15	ENSMUST00000039016.14	3062	5	319	-45	-16	-27	multi-exon	FALSE	canonical	3	54	junction_1	41.4517792139252	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	1571	False	NA	NA	False	NA	NA	NA	45003622	45015514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
tx.10468	chr19	+	2785	5	FSM	ENSMUSG00000035342.15	ENSMUST00000179108.9	2798	5	-12	25	-12	-16	multi-exon	FALSE	canonical	3	23	junction_1	54.407605166925	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAACTGCAGGGGAATT	1575	False	NA	NA	False	NA	NA	NA	45003626	45015525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_45003753_45009825_45010276_45011980_45012644_45013157_45013419_45014240
tx.10469	chr19	+	2758	5	FSM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	-91	27	-35	-27	multi-exon	FALSE	canonical	3	72	junction_1	34.0954542424646	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	60	False	NA	NA	False	NA	NA	NA	45006559	45015514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_45006670_45009825_45010276_45011980_45012644_45013157_45013419_45014240
tx.1047	chr1	+	2293	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	266	4	3	2	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCCACTTTTCTGAAA	1458	False	NA	NA	False	NA	NA	NA	171156978	171169895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
tx.10470	chr19	+	2644	4	ISM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	3179	27	3179	-27	3prime_fragment	FALSE	canonical	3	127	junction_1	14.3372087784044	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	605	False	NA	NA	False	NA	NA	NA	45009829	45015514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_45010276_45011980_45012644_45013157_45013419_45014240
tx.10471	chr19	-	4114	17	NNC	ENSMUSG00000074818.14	novel	3161	17	NA	NA	-923	-1	intron_retention	FALSE	canonical	2	6	junction_9	4.93987284755387	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGTCTGACTTCA	NA	False	NA	NA	False	NA	NA	NA	45035079	45015345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
tx.10472	chr19	+	2914	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	-46	-1	-46	0	multi-exon	TRUE	canonical	3	75	junction_2	13.7767920794356	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATCTTCAGTTATTCCA	NA	False	NA	NA	False	NA	NA	NA	45036066	45044822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
tx.10473	chr19	+	2164	14	FSM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	-94	-6	5	2	multi-exon	FALSE	canonical	3	132	junction_1	132.758623339525	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	NA	False	NA	NA	NA	45352177	45517734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
tx.10474	chr19	+	2196	14	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	5	4	combination_of_known_splicesites	FALSE	canonical	3	92	junction_2	165.00869620261	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	NA	False	NA	NA	NA	45352177	45517736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_45352326_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
tx.10475	chr19	+	2300	16	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	157	junction_2	153.826684580046	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	NA	False	NA	NA	NA	45352191	45517734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
tx.10476	chr19	+	2259	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	1	718	0	2	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	NA	False	NA	NA	NA	45352190	45517734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
tx.10477	chr19	+	2191	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	163.999393353781	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	NA	False	NA	NA	NA	45352192	45517734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
tx.10478	chr19	-	2335	9	FSM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	-14	3	-14	-3	multi-exon	FALSE	canonical	3	33	junction_8	11.9973955507018	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	45548984	45540716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
tx.10479	chr19	+	828	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	-5	530	-5	214	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGACTGCCCCTTTCTC	3687	False	NA	NA	False	NA	NA	NA	45549048	45566196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
tx.1048	chr1	+	2264	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	3	-649	3	0	multi-exon	FALSE	canonical	3	102	junction_1	61.0184398358398	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACTTTTCTGAAACTGA	1458	False	NA	NA	False	NA	NA	NA	171156978	171169899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
tx.10480	chr19	-	2261	9	FSM	ENSMUSG00000040913.12	ENSMUST00000046869.11	2068	9	-193	0	-193	0	multi-exon	FALSE	canonical	3	63	junction_8	9.07520660921833	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTTTGGTGGTTAG	NA	False	NA	NA	False	NA	NA	NA	45648944	45566692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
tx.10481	chr19	-	882	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	6	0	6	0	multi-exon	FALSE	canonical	3	216	junction_3	39.9229257444892	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGCTTTTTCAA	4893	False	NA	NA	False	NA	NA	NA	45738024	45736172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
tx.10482	chr19	-	5048	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	9	0	9	0	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	1459	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5485	False	NA	NA	False	NA	NA	NA	45771981	45738697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
tx.10483	chr19	-	2027	8	FSM	ENSMUSG00000025221.17	ENSMUST00000086993.11	1005	8	-22	-1000	-22	-3	multi-exon	FALSE	canonical	3	6	junction_7	6.66394502268034	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	45800752	45780787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45800636
tx.10484	chr19	-	3796	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4917	0	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_25	35.5729335309867	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	NA	False	NA	NA	False	NA	NA	NA	45982010	45805802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817
tx.10485	chr19	-	3746	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-70	0	-70	0	multi-exon	FALSE	canonical	3	159	junction_20	17.3221707646588	316	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6577	False	NA	NA	False	NA	NA	NA	45986997	45805802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
tx.10486	chr19	-	2327	11	FSM	ENSMUSG00000025223.16	ENSMUST00000056931.14	2295	11	-31	-1	-31	0	multi-exon	TRUE	canonical	3	31	junction_10	244.379806858095	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	8057	False	NA	NA	False	NA	NA	NA	46028091	46021031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
tx.10487	chr19	-	2132	11	FSM	ENSMUSG00000025223.16	ENSMUST00000185355.7	2088	11	-21	-23	-18	0	multi-exon	FALSE	canonical	3	350	junction_1	132.738992010637	555	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	6700	False	NA	NA	False	NA	NA	NA	46033671	46021031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
tx.10488	chr19	-	2822	10	NIC	ENSMUSG00000025223.16	novel	2108	11	NA	NA	-18	0	intron_retention	FALSE	canonical	3	657	junction_1	53.8023359904074	346	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	6700	False	NA	NA	False	NA	NA	NA	46033671	46021031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
tx.10489	chr19	+	5121	14	FSM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	23	102	-19	8	multi-exon	FALSE	canonical	3	236	junction_7	80.0611452719015	233	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTATTTGGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	46045000	46061248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
tx.1049	chr1	+	2227	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	-13	-44	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCAGCATAACTTCAGT	1644	False	NA	NA	False	NA	NA	NA	171157164	171169849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
tx.10490	chr19	+	5119	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	3	combination_of_known_junctions	TRUE	canonical	3	238	junction_7	79.6883723412051	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	NA	False	NA	NA	NA	46045000	46061243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
tx.10491	chr19	+	4269	10	ISM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	6316	106	-4979	4	3prime_fragment	FALSE	canonical	3	236	junction_3	88.0661928380446	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTGGTATTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	46051293	46061244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
tx.10492	chr19	+	4074	10	ISM	ENSMUSG00000055491.15	ENSMUST00000062322.11	5205	14	6473	100	-4777	8	3prime_fragment	FALSE	canonical	3	238	junction_3	87.5518893761484	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTATTTGGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	46051495	46061248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
tx.10493	chr19	+	3537	13	FSM	ENSMUSG00000015176.12	ENSMUST00000165017.2	3634	13	97	0	8	0	multi-exon	FALSE	canonical	0	0	junction_11	313.587042674491	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTTCAGAGTTATGTC	234	False	NA	NA	False	NA	NA	NA	46064398	46073967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
tx.10494	chr19	+	3530	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	711	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTTCAGAGTTATGT	237	False	NA	NA	False	NA	NA	NA	46064401	46073966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
tx.10495	chr19	+	3530	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	-10	3	8	-1	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	645	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTTCAGAGTTATGT	234	False	NA	NA	False	NA	NA	NA	46064398	46073966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
tx.10496	chr19	-	1543	4	FSM	ENSMUSG00000025229.16	ENSMUST00000026259.16	1380	4	-160	-3	-160	3	multi-exon	FALSE	canonical	3	5	junction_1	2.62466929133727	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGATTCAGACTTGCGG	NA	False	NA	NA	False	NA	NA	NA	46136925	46124120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_46125045_46125421_46125625_46125803_46125934_46136639
tx.10497	chr19	+	6414	40	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	14.1633654350608	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	9074	False	NA	NA	False	NA	NA	NA	46140970	46274948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
tx.10498	chr19	+	3002	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-18	-5	-18	0	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCAATGTGCTGCCCAT	NA	False	NA	NA	False	NA	NA	NA	46293164	46300466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
tx.10499	chr19	+	3147	22	FSM	ENSMUSG00000025225.16	ENSMUST00000111881.4	3141	22	-4	-2	-4	2	multi-exon	FALSE	canonical	3	47	junction_12	7.7415743094745	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAATGTGCTGCCCATCC	NA	False	NA	NA	False	NA	NA	NA	46294130	46300468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
tx.105	chr1	-	7167	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-319	719	-6	488	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTTCTCAAGACATT	NA	False	NA	NA	False	NA	NA	NA	30912981	30842138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
tx.1050	chr1	+	2230	5	FSM	ENSMUSG00000013973.13	ENSMUST00000129116.8	849	5	-4	-1377	-4	1	multi-exon	FALSE	canonical	3	47	junction_1	84.8038177206663	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCCCACTTTTCTGAA	1653	False	NA	NA	False	NA	NA	NA	171157173	171169894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
tx.10500	chr19	+	1262	5	NNC	ENSMUSG00000025226.12	novel	1243	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.9772492000501	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	6286	False	NA	NA	False	NA	NA	NA	46316595	46318884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_46316730_46316841_46316966_46317113_46317268_46317526_46318033_46318540
tx.10501	chr19	+	1344	4	FSM	ENSMUSG00000025226.12	ENSMUST00000026256.9	1348	4	3	1	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.08248290463863	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	6316	False	NA	NA	False	NA	NA	NA	46316625	46318884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46316966_46317113_46317268_46317526_46318033_46318540
tx.10502	chr19	-	1335	9	ISM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	-11	-3	3	-1	intron_retention	FALSE	canonical	3	415	junction_8	247.19526694498	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5847	False	NA	NA	False	NA	NA	NA	46327074	46318979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751
tx.10503	chr19	+	2428	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	82.6896622735489	68	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4241	False	NA	NA	False	NA	NA	NA	46345361	46363693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
tx.10504	chr19	+	2237	9	FSM	ENSMUSG00000025227.15	ENSMUST00000086969.13	2278	9	43	-2	-12	2	multi-exon	FALSE	canonical	3	169	junction_1	30.2561977122044	271	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4241	False	NA	NA	False	NA	NA	NA	46345361	46363693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
tx.10505	chr19	-	2750	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	5	2	-4	1	multi-exon	FALSE	canonical	3	273	junction_3	19.222122671547	540	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTCTGACCTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	46384181	46365251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
tx.10506	chr19	+	4508	12	FSM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	-10	-2751	-10	-5	multi-exon	FALSE	canonical	3	32	junction_6	20.0218888484042	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGAGTTGTGTGCTTC	NA	False	NA	NA	False	NA	NA	NA	46385346	46477238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
tx.10507	chr19	+	4505	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	13	4	-9	-4	multi-exon	FALSE	canonical	3	63	junction_6	14.4473967456865	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGAGTTGTGTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	46385347	46477239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
tx.10508	chr19	+	1833	7	ISM	ENSMUSG00000025231.18	ENSMUST00000118440.3	2681	10	-118	22911	-10	0	5prime_fragment	FALSE	canonical	3	63	junction_6	13.5123400391395	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGACTTGGTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	46385346	46442482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600
tx.10509	chr19	+	3410	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-226	396	-226	-396	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	1275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGCACAGCCCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	46489914	46504891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
tx.1051	chr1	-	3125	6	NIC	ENSMUSG00000013997.11	novel	1335	7	NA	NA	-2	-6	intron_retention	TRUE	canonical	3	74	junction_5	27.7027074489119	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTCTGTCTTGACTT	876	False	NA	NA	False	NA	NA	NA	171173216	171168144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171172108_171172481_171172569_171173135
tx.10510	chr19	+	1756	4	ISM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	11426	396	-1532	-396	3prime_fragment	FALSE	canonical	3	1036	junction_2	37.3660570869101	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGCACAGCCCTTGTGG	115	False	NA	NA	False	NA	NA	NA	46501566	46504891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_46501781_46502891_46502924_46503060_46503177_46503497
tx.10511	chr19	-	912	6	FSM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	-80	11	25	0	multi-exon	FALSE	canonical	3	254	junction_1	35.3870032639103	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGAAATAGTATTAAAT	NA	False	NA	NA	False	NA	NA	NA	46561612	46519545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
tx.10512	chr19	+	3194	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	-3	14	-1	-14	multi-exon	FALSE	canonical	3	36	junction_10	6.85384611817119	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATTTGAAAGAACATGAAA	NA	False	NA	NA	False	NA	NA	NA	46561802	46585320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
tx.10513	chr19	+	3925	5	FSM	ENSMUSG00000047731.18	ENSMUST00000099376.11	3911	5	-9	-5	-8	2	multi-exon	FALSE	canonical	3	116	junction_1	18.7666592658363	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCCTGCCGCTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	46587543	46645826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
tx.10514	chr19	+	3877	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	21	2	-8	2	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCCTGCCGCTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	46587543	46645826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
tx.10515	chr19	+	2161	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	12	3	12	-3	multi-exon	FALSE	canonical	3	167	junction_1	5.33853912601566	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAATTTAGACCAATCA	9083	False	NA	NA	False	NA	NA	NA	46678356	46691818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
tx.10516	chr19	+	1737	11	FSM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	-1	0	-1	0	multi-exon	FALSE	canonical	3	159	junction_6	16.3612346722367	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGATGTCTGTAGTTT	5973	False	NA	NA	False	NA	NA	NA	46695895	46729534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
tx.10517	chr19	+	3323	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	20	1612	11	1	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	NA	False	NA	NA	NA	46750054	46867019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
tx.10518	chr19	+	3238	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	31	-218	30	1	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	NA	False	NA	NA	NA	46750073	46867019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
tx.10519	chr19	+	1689	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46182	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.6507474747231	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGCCAAGTCTGTCG	NA	False	NA	NA	False	NA	NA	NA	46807916	46867018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
tx.1052	chr1	-	3546	6	ISM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	24	6	3	-6	intron_retention	FALSE	canonical	3	103	junction_4	16.4608626748418	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTCTGTCTTGACTT	902	False	NA	NA	False	NA	NA	NA	171173190	171168144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481
tx.10520	chr19	-	2231	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-27	1524	-27	-525	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTAGTCAGCCGTCTGTT	7165	False	NA	NA	False	NA	NA	NA	46950774	46876791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
tx.10521	chr19	-	2659	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	-35	524	-35	-524	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGTCAGCCGTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	47003627	46876790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
tx.10522	chr19	+	2720	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	519	1	519	-1	multi-exon	FALSE	canonical	3	49	junction_2	0.5	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGACTCGTGCTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	47003655	47013765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_47004259_47010271_47010397_47011773
tx.10523	chr19	-	4797	9	NIC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-13	0	intron_retention	FALSE	canonical	3	493	junction_6	49.5654554604313	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	NA	False	NA	NA	NA	47039358	47022055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_47023125_47025676_47025764_47028482_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
tx.10524	chr19	-	2163	10	FSM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	-4	0	-2	0	multi-exon	FALSE	canonical	3	486	junction_3	49.2396507895471	661	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	NA	False	NA	NA	NA	47039347	47022055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
tx.10525	chr19	+	834	2	ISM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	-14	12260	-14	-12260	5prime_fragment	FALSE	canonical	3	300	junction_1	0	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGAATCTTAACGTCTT	NA	False	NA	NA	False	NA	NA	NA	47056170	47059658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_47056766_47059419
tx.10526	chr19	+	3264	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	-4	0	-4	0	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	399	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGTACAAATTGAGTA	NA	False	NA	NA	False	NA	NA	NA	47056180	47071918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
tx.10527	chr19	+	3102	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	71.9305220334178	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGTACAAATTGAGTA	NA	False	NA	NA	False	NA	NA	NA	47056177	47071918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47070247_47070426_47070582_47070761_47070865
tx.10528	chr19	-	450	5	NNC	ENSMUSG00000071528.5	novel	425	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2533.27548590752	64	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	NA	False	NA	NA	False	NA	NA	NA	47079080	47071902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_47072009_47073211_47073298_47074393_47074487_47074572_47074669_47079011
tx.10529	chr19	-	369	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	-3	-4	1	0	multi-exon	FALSE	canonical	3	3669	junction_3	1157.30270696804	746	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	NA	False	NA	NA	False	NA	NA	NA	47079085	47071902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
tx.1053	chr1	-	1341	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	1	-7	1	7	multi-exon	FALSE	canonical	3	74	junction_6	27.0025718939676	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACATGTCTTTTGGGGGC	880	False	NA	NA	False	NA	NA	NA	171173212	171169804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
tx.10530	chr19	+	6042	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	0	719	0	-105	multi-exon	FALSE	canonical	3	156	junction_7	35.2497097976186	339	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	47079206	47119585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
tx.10531	chr19	+	3101	17	ISM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	22434	719	-12948	-105	3prime_fragment	FALSE	canonical	3	226	junction_5	22.5041662809356	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	8810	False	NA	NA	False	NA	NA	NA	47101640	47119585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
tx.10532	chr19	-	2665	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	-620	413	-620	-413	multi-exon	FALSE	canonical	2	8	junction_2	1	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGACAGGGTATTTGT	4709	False	NA	NA	False	NA	NA	NA	47127353	47120674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_47121613_47123787_47124505_47126343
tx.10533	chr19	+	1756	4	FSM	ENSMUSG00000006435.17	ENSMUST00000235290.2	1060	4	-228	-468	-99	468	multi-exon	FALSE	canonical	3	8	junction_3	19.5675468285856	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATTGAGAGCCCAAACGA	NA	False	NA	NA	False	NA	NA	NA	47167361	47230303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47229740
tx.10534	chr19	+	2364	3	FSM	ENSMUSG00000006435.17	ENSMUST00000235326.2	4034	3	-76	1746	-76	469	multi-exon	FALSE	canonical	3	49	junction_1	0.5	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGAGAGCCCAAACGAG	NA	False	NA	NA	False	NA	NA	NA	47167384	47230304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_47167991_47228240_47228483_47228788
tx.10535	chr19	+	4035	6	FSM	ENSMUSG00000006435.17	ENSMUST00000111808.11	4158	6	117	6	-85	0	multi-exon	FALSE	canonical	3	49	junction_1	24.9206741481847	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	47167375	47247874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
tx.10536	chr19	+	3334	5	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	10977	0	10977	0	3prime_fragment	FALSE	canonical	3	50	junction_1	25.617376914899	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	47228326	47247874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
tx.10537	chr19	+	3233	4	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	11384	0	11384	0	3prime_fragment	FALSE	canonical	3	53	junction_1	25.0909456887451	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	47228733	47247874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_47229111_47241557_47242248_47245150_47245298_47245855
tx.10538	chr19	+	2566	3	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	24498	0	24498	0	3prime_fragment	FALSE	canonical	3	77	junction_1	18.5	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	1511	False	NA	NA	False	NA	NA	NA	47241847	47247874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_47242248_47245150_47245298_47245855
tx.10539	chr19	-	1969	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	16	7	-9	-2	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCAATTCATTTCCTT	NA	False	NA	NA	False	NA	NA	NA	47525542	47489478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
tx.1054	chr1	-	1694	7	NIC	ENSMUSG00000013997.11	novel	3041	7	NA	NA	3	5	intron_retention	FALSE	canonical	3	10	junction_6	48.6646689087679	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACATGTCTTTTGGGG	902	False	NA	NA	False	NA	NA	NA	171173190	171169806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172758
tx.10540	chr19	+	7549	19	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-64	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	102.985570726087	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	47568052	47633684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_47568783_47591238_47591447_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
tx.10541	chr19	+	7532	17	NIC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-50	0	intron_retention	FALSE	canonical	3	226	junction_7	40.0169885798519	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	47568066	47633685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
tx.10542	chr19	+	7332	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	-55	1	-55	-1	multi-exon	FALSE	canonical	3	226	junction_7	39.0368471130284	525	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	47568061	47633684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
tx.10543	chr19	+	5487	10	ISM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	40206	1	-786	-1	3prime_fragment	FALSE	canonical	3	287	junction_7	29.5639085940615	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	47608322	47633684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
tx.10544	chr19	+	1438	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	68	-54	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	42	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAATTTGTTTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	47720188	47723973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_47720261_47721068_47721192_47721288_47721428_47721957_47722351_47723262
tx.10545	chr19	+	1487	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	67	-54	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	514	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAATTTGTTTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	47720187	47723973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_47720261_47721068_47721192_47721240_47721428_47721957_47722351_47723262
tx.10546	chr19	+	1437	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	68	-55	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	611	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAATTTGTTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	47720188	47723972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_47720261_47721068_47721144_47721240_47721428_47721957_47722351_47723262
tx.10547	chr19	+	1146	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	32	4	-28	-3	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGAGTCCAAACCACC	8500	False	NA	NA	False	NA	NA	NA	47843440	47853225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
tx.10548	chr19	-	2403	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	690	junction_19	186.942819408855	1147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	5073	False	NA	NA	False	NA	NA	NA	53027058	52979612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
tx.10549	chr19	-	2493	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1586	-1	13	0	multi-exon	FALSE	canonical	3	790	junction_19	199.189727395767	1374	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	5072	False	NA	NA	False	NA	NA	NA	53027059	52979612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
tx.1055	chr1	+	621	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	30	1084	-30	200	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	342	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	NA	False	NA	NA	NA	171173267	171185738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
tx.10550	chr19	+	4259	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-205	0	13	0	multi-exon	TRUE	canonical	3	178	junction_5	22.1124214791929	441	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	2496	False	NA	NA	False	NA	NA	NA	53131199	53235518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
tx.10551	chr19	+	2641	6	FSM	ENSMUSG00000025025.15	ENSMUST00000003870.15	2627	6	-15	1	-15	-1	multi-exon	FALSE	canonical	3	46	junction_1	71.8843515655528	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGAGTTGTGTGTTAATG	NA	False	NA	NA	False	NA	NA	NA	53298933	53361723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_53299405_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
tx.10552	chr19	+	2440	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	38	-138	-7	-1	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGAGTTGTGTGTTAATG	4452	False	NA	NA	False	NA	NA	NA	53317881	53361723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
tx.10553	chr19	-	2003	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-53	-2	-53	2	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGTTAACAAAGGG	NA	False	NA	NA	False	NA	NA	NA	53379062	53367824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
tx.10554	chr19	+	2469	4	FSM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	-4	8	-4	-8	multi-exon	FALSE	canonical	3	31	junction_3	7.25718035235908	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGTGCTTGATCCTGTT	NA	False	NA	NA	False	NA	NA	NA	53517535	53530854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_53518128_53522256_53522406_53525887_53526108_53529346
tx.10555	chr19	+	4381	6	ISM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	166142	-1702	238	2	3prime_fragment	FALSE	canonical	3	12	junction_2	2.13541565040626	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTGTGTCATGCAGGG	NA	False	NA	NA	False	NA	NA	NA	53831878	53855513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
tx.10556	chr19	+	2326	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	46	9	-30	0	multi-exon	FALSE	canonical	3	114	junction_5	6.73954654285478	91	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGGGAGTGCA	514	False	NA	NA	False	NA	NA	NA	53891775	53918282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
tx.10557	chr19	-	901	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	-7	1149	-7	0	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGGCTTGTACACTAC	NA	False	NA	NA	False	NA	NA	NA	53933065	53919440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
tx.10558	chr19	-	777	4	FSM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	-20	-95	-17	1	multi-exon	FALSE	canonical	3	94	junction_3	45.8427263102398	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGCTTGTACACTACC	NA	False	NA	NA	False	NA	NA	NA	53932679	53919439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932586
tx.10559	chr19	+	4160	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	-236	-260	-236	-4	multi-exon	FALSE	canonical	3	14	junction_1	127.929668177479	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGAGCTTGTGTGTGTG	3122	False	NA	NA	False	NA	NA	NA	53932500	54021558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
tx.1056	chr1	+	4522	12	FSM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	-28	0	-28	0	multi-exon	FALSE	canonical	0	0	junction_5	11.0123897167112	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTATGTACTTTGTCTT	2464	False	NA	NA	False	NA	NA	NA	171216493	171237808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171216932_171225042_171225146_171228123_171228269_171229492_171229576_171229724_171229833_171230780_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234925_171235204_171235295
tx.10560	chr19	+	3888	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	361	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGCTTGTGTGTGTGGTG	3890	False	NA	NA	False	NA	NA	NA	53933268	54021561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
tx.10561	chr19	+	3965	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	123.021784148174	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTGTGGTGT	3932	False	NA	NA	False	NA	NA	NA	53933310	54021562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
tx.10562	chr19	+	3833	8	ISM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	42572	0	-513	0	3prime_fragment	FALSE	canonical	3	368	junction_1	19.5333310115854	334	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	53975882	54021562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
tx.10563	chr19	-	5951	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	-25	-2094	-25	-4	multi-exon	FALSE	canonical	3	55	junction_4	9.97045635866283	155	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACTGATTTTTAATGTC	8978	False	NA	NA	False	NA	NA	NA	55087908	55056071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
tx.10564	chr19	+	2836	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	315	1092	315	950	multi-exon	TRUE	canonical	3	56	junction_1	11.2473730871055	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	55242115	55285060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
tx.10565	chr19	-	2161	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	7	0	1	0	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	577	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTGTTTTTAGTT	7446	False	NA	NA	False	NA	NA	NA	55304457	55286732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
tx.10566	chr19	+	3431	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-54	28	2	-28	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTTAATTAAAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	55304728	55614965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
tx.10567	chr19	+	4037	12	FSM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	-44	-403	-44	1	multi-exon	FALSE	canonical	3	39	junction_11	15.7312133791442	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCTGGCCGCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	55730207	55922087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
tx.10568	chr19	+	3473	11	ISM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	763	-401	241	-1	3prime_fragment	FALSE	canonical	3	39	junction_10	16.2098735343617	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAAGGCTGGCCGCTTGC	NA	False	NA	NA	False	NA	NA	NA	55731014	55922085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
tx.10569	chr19	+	2384	7	FSM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	-36	2	-36	-2	multi-exon	FALSE	canonical	3	21	junction_1	6.36177822799744	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTGACTGGTCCGGTC	NA	False	NA	NA	False	NA	NA	NA	56385524	56430774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_56385750_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
tx.1057	chr1	+	3655	7	ISM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	14249	0	14204	0	3prime_fragment	FALSE	canonical	0	0	junction_5	9.51606828241346	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTATGTACTTTGTCTT	894	False	NA	NA	False	NA	NA	NA	171230770	171237808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234925_171235204_171235295
tx.10570	chr19	-	2841	8	ISM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	2533	-5	1636	3	3prime_fragment	FALSE	canonical	3	154	junction_5	16.4093054734943	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATTTGGATGGGTTTCA	1221	False	NA	NA	False	NA	NA	NA	56533951	56517595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446
tx.10571	chr19	-	4300	10	NNC	ENSMUSG00000025077.15	novel	4087	10	NA	NA	-219	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	51.9973883484712	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATATTTGGATGGGTTT	7755	False	NA	NA	False	NA	NA	NA	56536894	56517597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536627
tx.10572	chr19	-	4107	10	FSM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	4	-2	4	0	multi-exon	FALSE	canonical	3	154	junction_5	33.6088612653799	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATATTTGGATGGGTT	8169	False	NA	NA	False	NA	NA	NA	56536480	56517598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
tx.10573	chr19	-	4041	9	ISM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	346	-8	346	6	3prime_fragment	FALSE	canonical	3	154	junction_5	17.1518949390439	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGATGGGTTTCATTA	8511	False	NA	NA	False	NA	NA	NA	56536138	56517592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068
tx.10574	chr19	-	853	2	ISM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	-104	17865	-9	-7023	5prime_fragment	FALSE	canonical	3	276	junction_1	0	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTACATCCAAATAATTG	8061	False	NA	NA	False	NA	NA	NA	56536588	56535465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_56536136_56536405
tx.10575	chr19	+	3734	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	198	4659	198	-4659	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACTTGCTGACTTCCG	NA	False	NA	NA	False	NA	NA	NA	56536890	56587276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
tx.10576	chr19	+	3671	11	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	208	-4653	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	27.9399355761605	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGACTTCCGTTATTA	NA	False	NA	NA	False	NA	NA	NA	56536900	56587282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563248_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
tx.10577	chr19	-	8483	14	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-9	0	intron_retention	TRUE	canonical	3	43	junction_2	9.1554620422511	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGTTGATGGCGTCT	5188	False	NA	NA	False	NA	NA	NA	56810631	56775912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
tx.10578	chr19	-	6457	16	FSM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-16	4	-16	-4	multi-exon	FALSE	canonical	3	40	junction_2	9.58239125804317	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGTCTGTTGATGGC	5181	False	NA	NA	False	NA	NA	NA	56810638	56775916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
tx.10579	chr19	-	3158	15	NNC	ENSMUSG00000025083.19	novel	3531	19	NA	NA	147	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	3.17596201077367	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGTTTCCCTTGTATT	NA	False	NA	NA	False	NA	NA	NA	56925523	56900790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925460
tx.1058	chr1	+	1753	10	FSM	ENSMUSG00000026641.14	ENSMUST00000001284.13	1115	10	0	-638	0	2	multi-exon	FALSE	canonical	3	42	junction_4	49.4805111903093	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	NA	False	NA	NA	NA	171238880	171246327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
tx.10580	chr19	-	3293	16	NNC	ENSMUSG00000025083.19	novel	3531	19	NA	NA	-750	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	3.28227563335765	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGTTTCCCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	56926420	56900791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56926312
tx.10581	chr19	-	5561	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	-5	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	19.9193931188232	111	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTGGCAGTCCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	57107461	57021699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
tx.10582	chr19	-	3488	2	Genic_Genomic	ENSMUSG00000097785.3	novel	1197	3	NA	NA	2	-33844	multi-exon	TRUE	canonical	1	1	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTACACGTGTACCGTGTG	9270	False	NA	NA	False	NA	NA	NA	57349205	57345660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr19_-_57347841_57347897
tx.10583	chr19	+	5614	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	340	-3	-10	3	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACATTGTCGTATATTT	NA	False	NA	NA	False	NA	NA	NA	57349451	57378021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
tx.10584	chr19	+	5625	17	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	-61	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	26.2308710063162	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATTGTCGTATATTTT	NA	False	NA	NA	False	NA	NA	NA	57349400	57378022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370691_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
tx.10585	chr19	+	1682	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	27	2080	0	1908	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	154	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTAGCGCCTCTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	57441370	57477357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
tx.10586	chr19	+	5436	6	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	-82	-486029	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	10.1469207151727	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGTGGTAACAGTCAC	NA	False	NA	NA	False	NA	NA	NA	57599383	57635746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57631538
tx.10587	chr19	+	4347	6	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	-75	-486023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.2875881934985	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTAACAGTCACTTGTGA	NA	False	NA	NA	False	NA	NA	NA	57599390	57635752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57632626
tx.10588	chr19	+	7107	9	FSM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	-27	-6071	2	6014	multi-exon	FALSE	canonical	0	0	junction_1	14.1686273153048	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACATTCTCTTATTTG	NA	False	NA	NA	False	NA	NA	NA	58500425	58547531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_58500498_58500742_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
tx.10589	chr19	-	5753	12	FSM	ENSMUSG00000025092.8	ENSMUST00000066285.6	5734	12	-16	-3	12	3	multi-exon	TRUE	canonical	2	6	junction_2	4.33704016068239	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAGAATCGTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	58849432	58784178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_58788431_58789244_58789349_58792897_58793157_58793832_58793938_58794457_58794545_58797881_58798054_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
tx.1059	chr1	+	1784	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	0	383	0	2	multi-exon	FALSE	canonical	3	185	junction_1	10.3363197596069	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	NA	False	NA	NA	NA	171238880	171246327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
tx.10590	chr19	-	3645	17	FSM	ENSMUSG00000041362.18	ENSMUST00000047511.15	3974	17	467	-138	436	-2	multi-exon	FALSE	canonical	1	1	junction_15	2.31081019341702	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAAGGGTCCGCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	59064065	58961789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_58963641_58978620_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062_59049116_59063886
tx.10591	chr19	-	6026	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-44	0	-44	0	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATATCTTCATTTGAT	NA	False	NA	NA	False	NA	NA	NA	59334256	59285609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
tx.10592	chr19	-	1610	8	FSM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	-12	-647	-1	-14	multi-exon	FALSE	canonical	3	34	junction_7	86.2054972440971	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAGAACTGATACCT	9772	False	NA	NA	False	NA	NA	NA	60215130	60187031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60215075
tx.10593	chr19	-	2249	7	NIC	ENSMUSG00000057858.9	novel	1598	7	NA	NA	1	381	intron_retention	FALSE	canonical	3	31	junction_5	103.870779764517	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAACCCAG	9774	False	NA	NA	False	NA	NA	NA	60215128	60186636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214741
tx.10594	chr19	-	1681	9	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-1	1	intron_retention	FALSE	canonical	3	13	junction_8	105.606507256892	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTGTGTGTGTGTA	9772	False	NA	NA	False	NA	NA	NA	60215130	60187329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60213296_60213332_60214741
tx.10595	chr19	-	1728	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	1	306	1	7	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTGTAATGTCA	9774	False	NA	NA	False	NA	NA	NA	60215128	60187323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
tx.10596	chr19	-	1644	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTGTGTGTGTGTA	9774	False	NA	NA	False	NA	NA	NA	60215128	60187329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
tx.10597	chr19	-	5693	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	63	36	-7	-36	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	340	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAAACTTGCTTTTTA	6409	False	NA	NA	False	NA	NA	NA	60569400	60513169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
tx.10598	chr19	-	5602	8	FSM	ENSMUSG00000033417.17	ENSMUST00000166712.9	1305	8	12	-4309	-6	-36	multi-exon	FALSE	canonical	2	21	junction_3	70.8312164549628	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAAACTTGCTTTTTA	6410	False	NA	NA	False	NA	NA	NA	60569399	60513169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
tx.10599	chr3	-	170	1	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	94809361	94809191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr3_-_94809200_94809400
tx.106	chr1	-	7442	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	-8	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	43.1286777009994	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTTTGGTCTACTTTTA	NA	False	NA	NA	False	NA	NA	NA	30912979	30841430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30912658
tx.1060	chr1	+	1823	10	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	55.998015837865	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6762	False	NA	NA	False	NA	NA	NA	171238905	171246327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
tx.10600	chr19	-	5174	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-49	0	-34	0	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	2293	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8705	False	NA	NA	False	NA	NA	NA	60779130	60749554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
tx.10601	chr19	+	2270	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	3	-6	-2	6	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTTGATGTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	60800031	60824671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
tx.10602	chr19	+	2351	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTTGATGTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	60800030	60824671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
tx.10603	chr19	+	2341	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	-26	-8	0	8	multi-exon	FALSE	canonical	3	273	junction_1	50.1458809375207	301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	60800022	60824673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
tx.10604	chr19	-	1254	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	56	-1	1	1	multi-exon	FALSE	canonical	3	10	junction_12	6.9961950774782	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAAAAGGTATACCTTAT	NA	False	NA	NA	False	NA	NA	NA	60849861	60827184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
tx.10605	chr19	-	1450	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	11	17	11	-17	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	511	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTTTGACTTATTC	1458	False	NA	NA	False	NA	NA	NA	60862983	60852505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
tx.10606	chr19	-	3123	8	NNC	ENSMUSG00000059326.8	novel	1771	11	NA	NA	16	1252	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	38.6924028824306	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGAAAGGTTTGGTGC	9887	False	NA	NA	False	NA	NA	NA	61215105	61211142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214638_61214823_61214962
tx.10607	chr19	-	1424	8	ISM	ENSMUSG00000059326.8	ENSMUST00000237386.2	1771	11	697	-9	4	0	3prime_fragment	FALSE	canonical	3	89	junction_6	20.6861878398834	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9875	False	NA	NA	False	NA	NA	NA	61215117	61212839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962
tx.10608	chr19	-	1541	7	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	89	junction_5	19.9728983041187	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9864	False	NA	NA	False	NA	NA	NA	61215128	61212839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214494_61214652_61214823_61214962
tx.10609	chr19	-	1911	12	FSM	ENSMUSG00000059326.8	ENSMUST00000076046.7	1849	12	-62	0	-51	0	multi-exon	FALSE	canonical	3	33	junction_11	40.804310256849	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9757	False	NA	NA	False	NA	NA	NA	61216918	61212839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
tx.1061	chr1	+	1917	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	4	366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	81.7212296468916	265	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTGTTGAACATGG	NA	False	NA	NA	False	NA	NA	NA	171265106	171291579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289485_171290452_171290509_171290626
tx.10610	chr19	-	2566	3	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16441	1723	multi-exon	FALSE	canonical	2	4	junction_1	19	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61301948	61283616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr19_-_61285953_61287295_61287423_61301845
tx.10611	chr2	+	4180	8	FSM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	-31	0	-31	0	multi-exon	TRUE	canonical	3	29	junction_6	7.31785627135183	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	855	False	NA	NA	False	NA	NA	NA	3119387	3228843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
tx.10612	chr2	+	4072	7	FSM	ENSMUSG00000050530.15	ENSMUST00000091505.11	3449	7	-69	-554	-38	0	multi-exon	TRUE	canonical	2	5	junction_6	16.2241246981839	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	848	False	NA	NA	False	NA	NA	NA	3119380	3228843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3225854
tx.10613	chr2	+	4489	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-33	5	-33	-5	multi-exon	TRUE	canonical	3	230	junction_10	26.4695873268632	401	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTTTTGAGTGTTTTC	954	False	NA	NA	False	NA	NA	NA	3285215	3329909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
tx.10614	chr2	+	4382	12	FSM	ENSMUSG00000026643.17	ENSMUST00000102989.10	2162	12	-66	-2154	-21	-7	multi-exon	TRUE	canonical	3	6	junction_2	78.3416969921083	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTTTTGAGTGTTT	966	False	NA	NA	False	NA	NA	NA	3285227	3329907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_3285444_3305848_3305985_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
tx.10615	chr2	+	5721	10	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	23564	7	23495	-7	3prime_fragment	FALSE	canonical	3	230	junction_6	28.2449602190865	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTTTTGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	3308812	3329907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
tx.10616	chr2	-	4871	2	NNC	ENSMUSG00000049950.7	novel	1042	2	NA	NA	17	1678	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACCATTCTCAGTTTGT	2334	False	NA	NA	False	NA	NA	NA	3333663	3328307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_3330911_3331395
tx.10617	chr2	-	1025	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	17	0	17	0	multi-exon	FALSE	canonical	3	304	junction_1	0	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGGATCCTGCATGGA	2334	False	NA	NA	False	NA	NA	NA	3333663	3329985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_3330911_3333563
tx.10618	chr2	+	3725	14	FSM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	1	-1257	1	1257	multi-exon	FALSE	canonical	3	20	junction_5	4.46419019339905	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGTACTTGAGTATGAT	1022	False	NA	NA	False	NA	NA	NA	3425187	3456386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
tx.10619	chr2	+	3669	13	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	3	1259	intron_retention	FALSE	canonical	0	0	junction_4	9.10547759440559	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTACTTGAGTATGATGA	1024	False	NA	NA	False	NA	NA	NA	3425189	3456388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
tx.1062	chr1	-	3311	7	ISM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	13964	2075	-4302	1394	3prime_fragment	FALSE	canonical	3	70	junction_3	9.15453742990631	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATTAGACACCTTTAA	8647	False	NA	NA	False	NA	NA	NA	171840898	171830601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649
tx.10620	chr2	-	4298	6	NNC	ENSMUSG00000026646.17	novel	4327	6	NA	NA	9	-5	intron_retention	FALSE	canonical	2	2	junction_5	83.4903587248252	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTTCCTGTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	3476059	3456856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475754
tx.10621	chr2	-	3216	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	4	1107	4	658	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAATGTGCCCTTAAG	NA	False	NA	NA	False	NA	NA	NA	3476064	3457958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
tx.10622	chr2	-	2932	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-67	-534	-5	511	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACAGACAAAACC	NA	False	NA	NA	False	NA	NA	NA	3476073	3458105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
tx.10623	chr2	-	1753	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	40	2	-31	-2	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	1002	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGAGTCTTTGTTTTC	3982	False	NA	NA	False	NA	NA	NA	3513811	3489888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
tx.10624	chr2	+	3148	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	7	1	7	-1	multi-exon	FALSE	canonical	3	121	junction_1	8.49836585598797	195	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATGTTTGTCTCGTTTG	951	False	NA	NA	False	NA	NA	NA	3714501	3783178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
tx.10625	chr2	+	5804	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	8	-1457	8	0	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCAGTTGCCTCTTGGA	4441	False	NA	NA	False	NA	NA	NA	4564574	4618852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
tx.10626	chr2	+	4592	6	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	37496	-1453	31076	-4	3prime_fragment	FALSE	canonical	3	51	junction_3	8.23164625090267	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACCCCAGTTGCCTCT	4784	False	NA	NA	False	NA	NA	NA	4602062	4618848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
tx.10627	chr2	+	3774	3	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	43894	-1457	37474	0	3prime_fragment	FALSE	canonical	3	56	junction_1	1	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCAGTTGCCTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	4608460	4618852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_4609063_4610780_4610878_4615777
tx.10628	chr2	-	3545	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-30	7	-3	-7	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATACAGGTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	4656927	4626875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
tx.10629	chr2	+	3880	9	FSM	ENSMUSG00000048186.15	ENSMUST00000184139.8	2251	9	-50	-1579	-50	0	multi-exon	FALSE	canonical	2	4	junction_5	3.45506874027131	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACATGAGTCTTGCTTGC	4393	False	NA	NA	False	NA	NA	NA	4722591	4806953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_4723104_4725291_4725376_4749029_4749333_4754346_4754470_4757530_4757803_4767888_4768115_4793266_4793387_4801343_4801395_4804764
tx.1063	chr1	-	2294	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	-2	3406	-2	63	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCACCCTGCCCTCCAAT	NA	False	NA	NA	False	NA	NA	NA	171854864	171831932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
tx.10630	chr2	+	3197	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	-41	361	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTGGACTTGCTTC	4051	False	NA	NA	False	NA	NA	NA	4886333	4913309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
tx.10631	chr2	+	3295	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-34	2058	-34	362	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGGACTTGCTTCT	4058	False	NA	NA	False	NA	NA	NA	4886340	4913310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
tx.10632	chr2	+	3680	9	FSM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	-387	-360	294	360	multi-exon	FALSE	canonical	3	45	junction_1	174.928378200908	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTGTTGGACTTGCTT	4386	False	NA	NA	False	NA	NA	NA	4886668	4913308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
tx.10633	chr2	+	5426	8	ISM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	304	2060	304	360	3prime_fragment	FALSE	canonical	3	440	junction_1	51.033402426894	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTGTTGGACTTGCTT	4396	False	NA	NA	False	NA	NA	NA	4886678	4913308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
tx.10634	chr2	+	1444	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	-6	0	-6	0	multi-exon	FALSE	canonical	3	390	junction_4	31.960669188864	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATATTAAGTCAATTTCT	985	False	NA	NA	False	NA	NA	NA	4923823	4943541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
tx.10635	chr2	-	3409	19	ISM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	2014	0	1567	0	3prime_fragment	FALSE	canonical	3	627	junction_5	61.7022920117735	319	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	NA	False	NA	NA	NA	5015588	4995534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499
tx.10636	chr2	-	3453	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	41	0	3	0	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	1178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	NA	False	NA	NA	NA	5017561	4995534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
tx.10637	chr2	-	2096	11	ISM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	17845	0	-9003	0	3prime_fragment	FALSE	canonical	3	118	junction_4	15.7800506970035	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	NA	False	NA	NA	NA	5051011	5025452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
tx.10638	chr2	-	2649	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-35	0	-29	0	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	NA	False	NA	NA	NA	5068891	5025452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
tx.10639	chr2	-	2561	15	FSM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	-148	-2	-35	0	multi-exon	FALSE	canonical	3	32	junction_1	40.4028817925511	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	NA	False	NA	NA	NA	5068897	5025452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
tx.1064	chr1	-	2922	18	FSM	ENSMUSG00000003458.13	ENSMUST00000140643.8	3016	18	88	6	88	-6	multi-exon	FALSE	canonical	3	15	junction_16	166.01196438311	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9084	False	NA	NA	False	NA	NA	NA	171910274	171893585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171903192_171903308_171908778_171908884_171910167
tx.10640	chr2	+	2723	3	FSM	ENSMUSG00000026676.8	ENSMUST00000027988.8	2670	3	-53	0	-53	0	multi-exon	FALSE	canonical	3	30	junction_2	4	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGTCTTTGGATCG	4674	False	NA	NA	False	NA	NA	NA	5142533	5235689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_5143119_5146041_5146217_5233726
tx.10641	chr2	-	7001	11	FSM	ENSMUSG00000039145.17	ENSMUST00000044009.14	6962	11	-42	3	-42	-3	multi-exon	FALSE	canonical	3	18	junction_10	11.2977873939989	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTGGGTTGTCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	5719368	5298270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5718956
tx.10642	chr2	-	6696	11	FSM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	25	-5426	25	-4	multi-exon	FALSE	canonical	3	40	junction_3	6.22976725086901	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGGGTTGTCTGTTT	1202	False	NA	NA	False	NA	NA	NA	5680832	5298271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
tx.10643	chr2	-	1222	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-20	2	combination_of_known_splicesites	FALSE	canonical	3	91	junction_9	296.801433468727	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTACTGTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	5849772	5799473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
tx.10644	chr2	-	1255	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	203	369	-20	2	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	498	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTACTGTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	5849772	5799473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
tx.10645	chr2	+	1461	10	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-14	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	320.9755192388	29	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1922	False	NA	NA	False	NA	NA	NA	5850049	5873551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_5850197_5852931_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
tx.10646	chr2	+	1365	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	1	4	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	28	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1937	False	NA	NA	False	NA	NA	NA	5850064	5873551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
tx.10647	chr2	+	1378	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	350	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1935	False	NA	NA	False	NA	NA	NA	5850062	5873551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
tx.10648	chr2	-	2409	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	44	-5	44	5	multi-exon	TRUE	canonical	3	221	junction_3	37.3630833845388	260	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTCTAAGAGTATTTC	NA	False	NA	NA	False	NA	NA	NA	5900199	5875792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
tx.10649	chr2	-	4959	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	-2	21	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	14.4538401405885	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACCATTTTACTCAAA	NA	False	NA	NA	False	NA	NA	NA	5947605	5900904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_5902383_5902926_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
tx.1065	chr1	-	2807	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	88	6	88	-6	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	933	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9084	False	NA	NA	False	NA	NA	NA	171910274	171893585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
tx.10650	chr2	-	5376	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	-7	111	-7	-111	multi-exon	FALSE	canonical	3	33	junction_14	8.78119439484174	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGACACATTATTCTTT	NA	False	NA	NA	False	NA	NA	NA	5947610	5901036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
tx.10651	chr2	+	5367	23	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	62.7902187466164	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTGTTTTATTTGGT	1679	False	NA	NA	False	NA	NA	NA	5956280	6061514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_5956365_5957238_5957433_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
tx.10652	chr2	+	5179	22	NIC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_18	43.3799853532905	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGATTTGTTTTAT	1665	False	NA	NA	False	NA	NA	NA	5956266	6061509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051711_6051877_6055148_6055291_6056319_6056441_6060243
tx.10653	chr2	+	5175	22	FSM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	-6	5	-6	0	multi-exon	FALSE	canonical	3	171	junction_5	24.2975694686972	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGATTTGTTTTAT	1672	False	NA	NA	False	NA	NA	NA	5956273	6061509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
tx.10654	chr2	-	189	2	Antisense	novelGene_ENSMUSG00000043241.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	29	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAACAAGAATCTGGG	NA	False	NA	NA	False	NA	NA	NA	5995178	5991411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_5991551_5995128
tx.10655	chr2	-	1946	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	38	2414	8	4	multi-exon	FALSE	canonical	3	22	junction_3	5.90668171555645	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCTTGTTAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	6134984	6104831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
tx.10656	chr2	-	6252	4	ISM	ENSMUSG00000045319.14_ENSMUSG00000082332.3	ENSMUST00000126551.2	945	5	-3926	-1169	-109	4	intron_retention	FALSE	canonical	0	0	junction_3	16.2685791225499	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCTTGTTAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	6138876	6104831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134438
tx.10657	chr2	+	7433	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-34	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	34.0551241267734	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCGATGCAGCCTTGACT	4620	False	NA	NA	False	NA	NA	NA	6327443	6451199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
tx.10658	chr2	+	4947	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	-28	2565	-28	331	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGTGATTCAAAATCTA	4626	False	NA	NA	False	NA	NA	NA	6327449	6448636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
tx.10659	chr2	-	5673	14	NIC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	6.4284868971619	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTCTCTCTCTGCGTG	7759	False	NA	NA	False	NA	NA	NA	6877502	6546679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
tx.1066	chr1	+	4345	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	277	0	1	0	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	1492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	3041	False	NA	NA	False	NA	NA	NA	171910372	171949892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
tx.10660	chr2	-	4124	14	NIC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	-95	23	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	7.26912901841689	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTCCTTCCAGCACGC	7758	False	NA	NA	False	NA	NA	NA	6877503	6548217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
tx.10661	chr2	-	3847	5	FSM	ENSMUSG00000025782.13	ENSMUST00000114909.2	4897	5	1050	0	1050	0	multi-exon	FALSE	canonical	3	96	junction_4	22.410934831015	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCTTTTCCATTTTC	NA	False	NA	NA	False	NA	NA	NA	9957418	9919364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924
tx.10662	chr2	-	4801	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-11	2	-11	0	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	273	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCTTTTCCATTTTC	NA	False	NA	NA	False	NA	NA	NA	10053418	9919364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
tx.10663	chr2	-	1097	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	69	0	3	0	multi-exon	TRUE	canonical	3	3857	junction_2	289.314942238504	1947	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9573	False	NA	NA	False	NA	NA	NA	10085252	10060840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
tx.10664	chr2	+	1405	5	FSM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	-39	106	-8	-106	multi-exon	FALSE	canonical	3	38	junction_2	5.40832691319598	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTTATTTTATCTTT	4786	False	NA	NA	False	NA	NA	NA	10085395	10097511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096528
tx.10665	chr2	-	4268	3	ISM	ENSMUSG00000086748.2	ENSMUST00000137351.2	1020	4	24924	-3	24924	3	3prime_fragment	FALSE	canonical	3	493	junction_1	18.5	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	10353928	10344090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_10344284_10346331_10346540_10350061
tx.10666	chr2	-	706	5	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8800	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	256.084336693988	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	10370052	10344090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10351924_10352011_10369968
tx.10667	chr2	+	7964	23	FSM	ENSMUSG00000061186.16	ENSMUST00000041105.7	7874	23	-92	2	-78	-2	multi-exon	FALSE	canonical	3	38	junction_1	8.61768314629387	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGGTGTTTGTGTTTC	4611	False	NA	NA	False	NA	NA	NA	10377168	10600062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
tx.10668	chr2	-	4404	16	NNC	ENSMUSG00000026773.20	novel	4801	15	NA	NA	-48	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.0436244083286	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGGACTCGCTTCTCAGG	NA	False	NA	NA	False	NA	NA	NA	11558936	11476633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_11477682_11477736_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
tx.10669	chr2	-	4607	15	FSM	ENSMUSG00000026773.20	ENSMUST00000114846.9	4634	15	28	-1	2	-1	multi-exon	FALSE	canonical	3	18	junction_2	9.41693004267163	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGACTCGCTTCTCA	6336	False	NA	NA	False	NA	NA	NA	11506884	11476635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
tx.1067	chr1	+	2299	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	7	-389	0	389	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGTATACAATGTATC	NA	False	NA	NA	False	NA	NA	NA	171954328	171963239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
tx.10670	chr2	-	4459	15	FSM	ENSMUSG00000026773.20	ENSMUST00000192949.6	4801	15	-44	386	-44	5	multi-exon	FALSE	canonical	3	18	junction_2	9.7969174660571	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCGCTTCTCAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	11558932	11476629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
tx.10671	chr2	-	1577	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	20	2	20	0	multi-exon	FALSE	canonical	3	1239	junction_6	93.4948621914506	1057	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	11608053	11590249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
tx.10672	chr2	-	3566	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	88	junction_20	47.1269296687149	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	11782362	11747383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
tx.10673	chr2	-	3562	21	FSM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	7	-2	7	0	multi-exon	FALSE	canonical	3	183	junction_20	31.6521721213569	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	11782386	11747383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
tx.10674	chr2	+	4180	5	NIC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	29	junction_2	17.8097585609688	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4794	False	NA	NA	False	NA	NA	NA	11783327	11795136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_11783714_11784487_11784635_11786287_11789264_11791034_11791114_11794544
tx.10675	chr2	+	3682	6	NIC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	29	junction_2	16.4	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4751	False	NA	NA	False	NA	NA	NA	11783284	11795136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_11783714_11784487_11784635_11786287_11788561_11789101_11789264_11791034_11791114_11794544
tx.10676	chr2	+	1602	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	16	0	16	0	multi-exon	FALSE	canonical	3	24	junction_3	18.7742435858871	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4784	False	NA	NA	False	NA	NA	NA	11783317	11795136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
tx.10677	chr2	+	2275	4	ISM	ENSMUSG00000047909.12	ENSMUST00000156067.8	1485	7	3744	0	-981	0	3prime_fragment	FALSE	canonical	3	45	junction_2	12.7104506432917	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	8585	False	NA	NA	False	NA	NA	NA	11787118	11795136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_11788561_11789101_11789264_11791034_11791114_11794544
tx.10678	chr2	-	2323	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	20	1	-1	-1	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCACTTTTACATTT	NA	False	NA	NA	False	NA	NA	NA	12424261	12352074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
tx.10679	chr2	+	2331	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	-18	-1081	-18	202	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAATGTTAGTTAAAATG	4694	False	NA	NA	False	NA	NA	NA	12928833	13006872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
tx.1068	chr1	+	2244	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	390	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGTATACAATGTATCC	NA	False	NA	NA	False	NA	NA	NA	171954334	171963240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
tx.10680	chr2	-	1495	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	94	-43	-10	43	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	237	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGGGTGTGCACATTTT	7137	False	NA	NA	False	NA	NA	NA	13276132	13081779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
tx.10681	chr2	-	2635	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	6	1147	1	-1147	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTACTCTTTTTGTTAA	9035	False	NA	NA	False	NA	NA	NA	13549473	13514971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
tx.10682	chr2	+	1852	10	NIC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	86.9850278020786	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTGGTGTGTTATTTT	-2	True	NA	NA	False	NA	NA	NA	13578769	13587636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_13578872_13579204_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
tx.10683	chr2	+	1837	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	355	1	-15	0	multi-exon	FALSE	canonical	3	229	junction_1	35.7786161694384	283	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTGGTGTGTTATTTT	76	False	NA	NA	False	NA	NA	NA	13579117	13587636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
tx.10684	chr2	-	3521	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	204	3893	204	2240	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAAGTACACCAGA	NA	False	NA	NA	False	NA	NA	NA	13798671	13659724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
tx.10685	chr2	-	871	5	NNC	ENSMUSG00000063275.16	novel	871	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.8018691180654	26	5	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	14060823	14031641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_14031818_14040589_14040769_14049593_14049683_14049921_14050067_14060541
tx.10686	chr2	-	731	2	FSM	ENSMUSG00000086657.3	ENSMUST00000152524.2	801	2	76	-6	-10	6	multi-exon	FALSE	canonical	3	11	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATATTATAATTACTGG	NA	False	NA	NA	False	NA	NA	NA	14078669	14075136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_14075592_14078393
tx.10687	chr2	+	3816	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	32	1152	22	942	multi-exon	TRUE	canonical	3	181	junction_8	24.7443735759998	267	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCTGTCTTAGTTACGT	4714	False	NA	NA	False	NA	NA	NA	14078940	14153293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
tx.10688	chr2	-	2440	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-18	475	14	-475	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAAAGGTGAAGTCT	960	False	NA	NA	False	NA	NA	NA	15054109	15000416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
tx.10689	chr2	-	4174	10	NIC	ENSMUSG00000026707.16	novel	3149	12	NA	NA	4	-468	intron_retention	FALSE	canonical	3	48	junction_2	8.45905169363301	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGAAGTCTAGTGATT	950	False	NA	NA	False	NA	NA	NA	15054119	15000409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
tx.1069	chr1	+	3645	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-9	-882	-9	0	multi-exon	TRUE	canonical	3	418	junction_1	55.9704063816991	281	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTATGTG	NA	False	NA	NA	False	NA	NA	NA	171975675	172023956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
tx.10690	chr2	+	6929	6	FSM	ENSMUSG00000017418.15	ENSMUST00000069870.11	6981	6	48	4	1	0	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTAGCCTGTGTTTT	4706	False	NA	NA	False	NA	NA	NA	15060098	15087263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
tx.10691	chr2	+	7014	7	NNC	ENSMUSG00000017418.15	novel	6981	6	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_1	47.3110276080887	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTAGCCTGTGTT	4710	False	NA	NA	False	NA	NA	NA	15060102	15087261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_15060386_15064890_15064982_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
tx.10692	chr2	+	6891	6	FSM	ENSMUSG00000017418.15	ENSMUST00000128682.9	1035	6	1	-5857	1	0	multi-exon	FALSE	canonical	3	15	junction_2	39.1989795785554	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTAGCCTGTGTTTT	4706	False	NA	NA	False	NA	NA	NA	15060098	15087263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_15060386_15072949_15073011_15074668_15074779_15077934_15078019_15079772_15079925_15081066
tx.10693	chr2	+	6286	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-335	-683	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	14.5140677711421	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTATGTCCAGA	4010	False	NA	NA	False	NA	NA	NA	16360779	16759967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_16360983_16361295_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
tx.10694	chr2	+	6118	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	4	825	4	-825	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTAGTTATCTCTTA	103	False	NA	NA	False	NA	NA	NA	16361118	16759825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
tx.10695	chr2	+	2498	2	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGTTTCTATTAAGGAA	NA	False	NA	NA	False	NA	NA	NA	17940958	17953353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_17941086_17950982
tx.10696	chr2	-	3457	2	NNC	ENSMUSG00000054057.3	novel	3217	2	NA	NA	47	6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTACTTTGCTCTGAAT	NA	False	NA	NA	False	NA	NA	NA	18033635	18029997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_18033050_18033230
tx.10697	chr2	-	3164	2	FSM	ENSMUSG00000054057.3	ENSMUST00000135980.2	363	2	-66	-2735	45	2	multi-exon	FALSE	canonical	2	4	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCCTACTTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	18033637	18030001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_18033050_18033521
tx.10698	chr2	-	2166	2	NNC	ENSMUSG00000054074.10	novel	835	2	NA	NA	-15409	-429	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAGAATCAAGTCAGTGTA	NA	False	NA	NA	False	NA	NA	NA	18069271	18053383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_18055005_18068726
tx.10699	chr2	+	5064	23	FSM	ENSMUSG00000026743.17	ENSMUST00000114680.9	3543	23	-101	-1420	-50	2	multi-exon	FALSE	canonical	3	88	junction_1	48.8940497317777	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	NA	False	NA	NA	NA	18069396	18217201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
tx.107	chr1	-	4644	12	ISM	ENSMUSG00000048874.16	ENSMUST00000088310.10	7561	15	38744	761	-669	443	3prime_fragment	FALSE	canonical	3	124	junction_8	16.7460369062688	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	10027	False	NA	NA	False	NA	NA	NA	30863593	30842183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290
tx.1070	chr1	+	3772	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	9	-922	9	-1	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTGTGTGGTATGT	NA	False	NA	NA	False	NA	NA	NA	171975717	172023955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
tx.10700	chr2	+	5037	23	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-49	2	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	47.2740384433549	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4593	False	NA	NA	False	NA	NA	NA	18069397	18217201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
tx.10701	chr2	-	5476	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	9	12	3	-12	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGGTCAAAACTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	18397632	18218571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
tx.10702	chr2	+	917	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	10	8	0	-7	multi-exon	FALSE	canonical	3	388	junction_2	22.7909756576714	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGCATTCTGTTTGGAG	70	False	NA	NA	False	NA	NA	NA	18677243	18681034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
tx.10703	chr2	+	2756	4	FSM	ENSMUSG00000051154.12	ENSMUST00000130537.8	544	4	-1912	-300	0	-7	multi-exon	FALSE	canonical	3	404	junction_2	14.522013940528	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGCATTCTGTTTGGAG	72	False	NA	NA	False	NA	NA	NA	18677245	18681034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_18679528_18679619_18679677_18679760_18679821_18680677
tx.10704	chr2	+	3694	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	-100	0	-100	0	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGGTTTGCTTCTTAA	4555	False	NA	NA	False	NA	NA	NA	18681728	18691440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
tx.10705	chr2	-	3498	9	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-173	-5	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	29.756301853557	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTTTGGCTTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	19003110	18847070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18893862_18894016_18911039_18911137_18912865_18912964_19002662
tx.10706	chr2	-	3620	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	-144	1	-144	-1	multi-exon	FALSE	canonical	3	72	junction_7	14.3139403690559	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCTTCTCTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19003081	18847066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
tx.10707	chr2	-	3446	8	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-156	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	32.7008706118891	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCTTCTCTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19003093	18847066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18893862_18894016_18911039_18911137_18912865_18912964_19002662
tx.10708	chr2	+	1199	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	-4	1	-4	-1	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTGTCTCAGTCTG	4780	False	NA	NA	False	NA	NA	NA	19376442	19399786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
tx.10709	chr2	+	3999	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9567	24077	-177	748	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	33	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAGAGAAAAAAAAAAAAAA	4619	False	NA	NA	False	NA	NA	NA	20524424	20791258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
tx.1071	chr1	-	2422	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	78	1	-29	-1	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGACTGATTCTAGAATC	NA	False	NA	NA	False	NA	NA	NA	172034293	172024295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
tx.10710	chr2	+	7294	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	40.2682831275283	68	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4619	False	NA	NA	False	NA	NA	NA	20524424	20815335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
tx.10711	chr2	+	5617	18	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9567	0	-177	0	3prime_fragment	FALSE	canonical	3	69	junction_16	36.8251268212062	82	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4619	False	NA	NA	False	NA	NA	NA	20524424	20815335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
tx.10712	chr2	+	3164	3	ISM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	68834	189	-1306	0	3prime_fragment	FALSE	canonical	3	106	junction_1	60.5	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	20810958	20815335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_20812185_20812712_20812836_20813520
tx.10713	chr2	-	7288	25	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_24	24.4408299095318	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	NA	False	NA	NA	NA	20973238	20852750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20972870
tx.10714	chr2	-	5703	18	ISM	ENSMUSG00000036591.17	ENSMUST00000173194.8	6920	24	86263	0	1772	0	3prime_fragment	FALSE	canonical	3	92	junction_6	12.7135053385398	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	NA	False	NA	NA	NA	20886268	20852750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
tx.10715	chr2	-	6927	24	FSM	ENSMUSG00000036591.17	ENSMUST00000173194.8	6920	24	-3	-4	-2	4	multi-exon	FALSE	canonical	3	74	junction_22	15.1268111602881	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTGGGAGCTTACTT	NA	False	NA	NA	False	NA	NA	NA	20972534	20852746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140
tx.10716	chr2	-	7386	25	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	-67	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_24	19.6061480578585	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACTGTTGGGAGCTTA	NA	False	NA	NA	False	NA	NA	NA	20973759	20852749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
tx.10717	chr2	-	7247	25	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_11	26.1419402812161	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	NA	False	NA	NA	NA	20973618	20852750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
tx.10718	chr2	-	5479	8	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	24	9044	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	18.023793797565	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTAACTAAGAGTAGTC	NA	False	NA	NA	False	NA	NA	NA	20973412	20882124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
tx.10719	chr2	+	1738	2	FSM	ENSMUSG00000075514.5	ENSMUST00000126967.2	854	2	-532	-352	-532	352	multi-exon	FALSE	canonical	3	36	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTATATTTGTGATTT	3077	False	NA	NA	False	NA	NA	NA	20973332	20975160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_20974195_20974284
tx.1072	chr1	-	3448	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	5	2774	5	60	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTCTGCTACATTTTC	NA	False	NA	NA	False	NA	NA	NA	172125626	172102049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
tx.10720	chr2	+	3564	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	11	324	-4	309	multi-exon	FALSE	canonical	3	53	junction_1	4.5	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCAGCTCTCTGGTTTT	4795	False	NA	NA	False	NA	NA	NA	21210545	21219496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_21210657_21214695_21214853_21216200
tx.10721	chr2	+	3776	3	NNC	ENSMUSG00000048550.18	novel	3899	3	NA	NA	-1	311	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	30.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGCTCTCTGGTTTTGC	4798	False	NA	NA	False	NA	NA	NA	21210548	21219498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_21210870_21214695_21214853_21216200
tx.10722	chr2	+	1585	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	53	4	-20	-4	multi-exon	FALSE	canonical	3	239	junction_4	19.641792178923	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTGGTTTGTCTTTGTT	5661	False	NA	NA	False	NA	NA	NA	22785586	22830274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
tx.10723	chr2	+	1666	11	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-18	-4	intron_retention	FALSE	canonical	3	20	junction_4	78.6860216302743	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTGGTTTGTCTTTGTT	5663	False	NA	NA	False	NA	NA	NA	22785588	22830274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
tx.10724	chr2	+	1727	12	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	18	junction_1	114.335594191719	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	5671	False	NA	NA	False	NA	NA	NA	22785596	22830278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_22785775_22789930_22789996_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
tx.10725	chr2	+	1469	10	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	31	junction_8	77.9635875755748	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTGTCTTTGTTTC	5665	False	NA	NA	False	NA	NA	NA	22785590	22830276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22825570_22825652_22829834
tx.10726	chr2	-	3274	9	NIC	ENSMUSG00000058835.15	novel	3360	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	102.292396467186	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCTTAAAATGATTTT	NA	False	NA	NA	False	NA	NA	NA	22930208	22830084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_22832060_22836587_22836774_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
tx.10727	chr2	-	3357	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	23	23	1	-10	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCCCATCAATAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	22930230	22830107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
tx.10728	chr2	-	2969	9	FSM	ENSMUSG00000058835.15	ENSMUST00000149719.8	3303	9	56	278	0	0	multi-exon	FALSE	canonical	3	21	junction_2	106.193220122567	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	22930197	22830375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_22832060_22836587_22836774_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
tx.10729	chr2	-	3172	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	5	183	-3	52	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGATTATTTATTTGTGT	NA	False	NA	NA	False	NA	NA	NA	22930202	22830267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
tx.1073	chr1	-	4895	22	ISM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	4371	1165	4371	-1165	3prime_fragment	FALSE	canonical	3	93	junction_19	22.8792551771319	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCATGTGTGGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	172121260	172100440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138
tx.10730	chr2	+	3629	13	FSM	ENSMUSG00000026781.18	ENSMUST00000227809.2	1986	13	-38	-1605	-4	0	multi-exon	FALSE	canonical	3	36	junction_1	25.6850583457041	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGTATTGACT	NA	False	NA	NA	False	NA	NA	NA	22958174	23004522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
tx.10731	chr2	+	3602	13	FSM	ENSMUSG00000026781.18	ENSMUST00000028121.15	3630	13	28	0	-5	0	multi-exon	FALSE	canonical	3	36	junction_1	26.6993289553627	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	NA	NA	NA	22958207	23004525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
tx.10732	chr2	+	3760	14	NIC	ENSMUSG00000026781.18	novel	4566	14	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	39.0328340013573	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGTATTGACT	NA	False	NA	NA	False	NA	NA	NA	22958229	23004522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_22958299_22958891_22959078_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
tx.10733	chr2	+	3720	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114529.10	3630	13	5	-95	1	0	multi-exon	FALSE	canonical	3	40	junction_1	26.0302975182553	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGTATTGACT	NA	False	NA	NA	False	NA	NA	NA	22959084	23004522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
tx.10734	chr2	+	3721	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	4	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	24.981103969912	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	NA	NA	NA	22959083	23004525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
tx.10735	chr2	+	3595	12	ISM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	287	9	28	-6	3prime_fragment	FALSE	canonical	3	49	junction_8	20.3972936140278	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	NA	NA	NA	22959366	23004516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
tx.10736	chr2	-	3201	5	ISM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	22585	956	22458	-956	3prime_fragment	FALSE	canonical	3	112	junction_2	10.3772587902586	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATTATTTATCCTACA	2638	False	NA	NA	False	NA	NA	NA	23023451	23006573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636
tx.10737	chr2	-	4559	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	99	932	-28	-932	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTTGTTTCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	23045937	23006549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
tx.10738	chr2	-	4439	11	NIC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-28	-938	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.7274534606947	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAGCAGTGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	23045937	23006555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_23008605_23010468_23010571_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
tx.10739	chr2	-	6502	12	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-21	1164	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_11	38.6118638899737	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATAGCTGTCGATTTCT	NA	False	NA	NA	False	NA	NA	NA	23045930	23004453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045836
tx.1074	chr1	+	2284	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	-10	4	-10	2	multi-exon	FALSE	canonical	3	675	junction_3	44.2329691017408	985	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGAGGCCTGTTGTGTCTTC	3733	False	NA	NA	False	NA	NA	NA	172139923	172147404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
tx.10740	chr2	+	3302	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	147	1258	-2	-1258	multi-exon	TRUE	canonical	3	665	junction_5	65.7463325738674	1051	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACCTTGTTACATGATAT	7220	False	NA	NA	False	NA	NA	NA	23046527	23088014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
tx.10741	chr2	+	3505	17	ISM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	6131	708	5667	-708	3prime_fragment	FALSE	canonical	3	665	junction_3	69.3107810877933	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGAGTTTAGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	23052511	23088564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
tx.10742	chr2	-	6569	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	20	6	-6	-6	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTAATTTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	23462096	23396237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
tx.10743	chr2	-	6579	12	NIC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	14.5431816405973	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTAATTTTCTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	23462078	23396235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434839_23435164_23435287_23435455_23435592_23461854
tx.10744	chr2	-	5414	12	FSM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-99	-3799	1	-1251	multi-exon	FALSE	canonical	3	30	junction_7	7.08391263228297	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGAAATGTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	23462089	23397482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
tx.10745	chr2	+	4758	17	FSM	ENSMUSG00000026979.17	ENSMUST00000056641.15	4748	17	1	-11	1	11	multi-exon	FALSE	canonical	2	7	junction_1	5.02338282435253	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTTTTCATCCACTTA	NA	False	NA	NA	False	NA	NA	NA	24275344	24298752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
tx.10746	chr2	+	5463	16	NIC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-1	1736	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAACAAAGTATAAAGC	NA	False	NA	NA	False	NA	NA	NA	24275345	24300477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_24275475_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
tx.10747	chr2	+	3794	17	FSM	ENSMUSG00000026979.17	ENSMUST00000166388.2	4181	17	-332	719	-284	474	multi-exon	FALSE	canonical	1	3	junction_1	5.49857936198069	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTCCACTTGCGGAATT	NA	False	NA	NA	False	NA	NA	NA	24276296	24297493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_24276722_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
tx.10748	chr2	-	3642	3	ISM	ENSMUSG00000004113.19	ENSMUST00000102939.9	9736	47	154755	243	-840	-243	3prime_fragment	FALSE	canonical	2	6	junction_1	0.5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTGTCGCAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	24498386	24494148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_24497113_24497453_24497699_24497953
tx.10749	chr2	-	5088	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-22	-386	1	24	multi-exon	FALSE	canonical	3	154	junction_23	33.3131324390158	359	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCATTATGACACAT	9591	False	NA	NA	False	NA	NA	NA	24809625	24680782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
tx.1075	chr1	+	1587	5	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	5072	2	-871	-2	3prime_fragment	FALSE	canonical	3	675	junction_1	52.6687763290548	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCCTGTTGTGTCTTCTC	8815	False	NA	NA	False	NA	NA	NA	172145005	172147406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
tx.10750	chr2	-	5106	27	FSM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	3	844	3	23	multi-exon	FALSE	canonical	3	34	junction_23	50.1601134592868	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTTTCATTATGACACA	9593	False	NA	NA	False	NA	NA	NA	24809623	24680783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
tx.10751	chr2	-	4951	26	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-6	24	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	57.3307038156693	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCATTATGACACAT	9584	False	NA	NA	False	NA	NA	NA	24809632	24680782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
tx.10752	chr2	-	1620	8	FSM	ENSMUSG00000026972.16	ENSMUST00000028349.14	1666	8	46	0	-18	0	multi-exon	FALSE	canonical	3	62	junction_2	7.55658923167897	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9363	False	NA	NA	False	NA	NA	NA	24825218	24815363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
tx.10753	chr2	-	2276	6	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	19	0	intron_retention	FALSE	canonical	3	75	junction_2	4.57820925690384	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9336	False	NA	NA	False	NA	NA	NA	24825245	24815363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_24815689_24815767_24816461_24816556_24816740_24816889_24817045_24817137_24817852_24825039
tx.10754	chr2	-	1692	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	75	junction_2	4.41273409829124	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9368	False	NA	NA	False	NA	NA	NA	24825213	24815363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_24815689_24815767_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
tx.10755	chr2	+	2810	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-16	1109	-16	-1109	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	724	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACGGTTGTTGTAAAG	NA	False	NA	NA	False	NA	NA	NA	24839787	24850978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
tx.10756	chr2	+	1633	9	FSM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	33	0	-8	0	multi-exon	FALSE	canonical	3	62	junction_3	22.9945645751338	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	24852444	24862175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
tx.10757	chr2	-	729	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	45	2	45	-2	multi-exon	FALSE	canonical	3	317	junction_1	0	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATGTGTTTTGAATCAA	NA	False	NA	NA	False	NA	NA	NA	24865065	24864130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_24864694_24864899
tx.10758	chr2	+	5288	35	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-795	15	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.92141779661339	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGTGTAAAGGTTGCAG	NA	False	NA	NA	False	NA	NA	NA	24865249	24944084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_24866230_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
tx.10759	chr2	+	4621	35	FSM	ENSMUSG00000036833.17	ENSMUST00000045295.14	4574	35	-47	0	-47	0	multi-exon	FALSE	canonical	3	15	junction_1	7.94602248652754	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTACTCTG	NA	False	NA	NA	False	NA	NA	NA	24865997	24944069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
tx.1076	chr1	+	4205	21	NIC	ENSMUSG00000037995.16	novel	636	6	NA	NA	-37	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	3.57631094844953	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCACCTCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	172309317	172326444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_172309436_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
tx.10760	chr2	+	2923	15	FSM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	-1	0	-1	0	multi-exon	TRUE	canonical	1	2	junction_11	1.80136003041693	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGTCTTCTC	9530	False	NA	NA	False	NA	NA	NA	24944394	24952893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
tx.10761	chr2	-	3274	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	248	-267	121	267	multi-exon	FALSE	canonical	3	13	junction_1	0	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTAATGGTAAATTCAC	8510	False	NA	NA	False	NA	NA	NA	25086650	25082710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25085938_25086603
tx.10762	chr2	-	2753	12	FSM	ENSMUSG00000013465.20	ENSMUST00000128876.8	2754	12	1	0	1	0	multi-exon	TRUE	canonical	3	539	junction_7	56.9757089026427	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	NA	NA	NA	25101392	25089727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720
tx.10763	chr2	-	2558	13	FSM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	75	4	-33	0	multi-exon	FALSE	canonical	3	539	junction_7	54.5501807716732	1000	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	NA	NA	NA	25101426	25089727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
tx.10764	chr2	-	1456	3	ISM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	441	2	393	-2	3prime_fragment	FALSE	canonical	3	1343	junction_2	31.5	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	NA	False	NA	NA	NA	25114273	25112173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_25113381_25113945_25114057_25114135
tx.10765	chr2	-	1549	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	47	2	-1	-2	multi-exon	FALSE	canonical	3	1343	junction_2	25.8499946271217	1204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	NA	False	NA	NA	NA	25114667	25112173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
tx.10766	chr2	+	1800	2	NNC	ENSMUSG00000044628.6	novel	1137	2	NA	NA	-725	0	intron_retention	FALSE	canonical	3	42	junction_1	0	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTGTTCACTGATTGA	NA	False	NA	NA	False	NA	NA	NA	25132215	25134273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_25132536_25132793
tx.10767	chr2	-	2329	14	FSM	ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	13	-6	-10	6	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTCACTTCTCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	25145408	25137234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
tx.10768	chr2	+	2803	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	142	junction_1	10.4986771653491	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGCCTTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	25152613	25159897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
tx.10769	chr2	-	1018	2	FSM	ENSMUSG00000026966.7	ENSMUST00000141470.2	1006	2	35	-47	1	0	multi-exon	FALSE	canonical	3	843	junction_1	0	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	NA	False	NA	NA	NA	25162415	25161050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25161594_25161940
tx.1077	chr1	+	1376	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	208	2	10	-2	multi-exon	FALSE	canonical	3	984	junction_4	118.904373342615	629	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTGTTTCTAGGG	NA	False	NA	NA	False	NA	NA	NA	172327821	172334945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
tx.10770	chr2	-	856	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	4	2	-2	-2	multi-exon	FALSE	canonical	3	707	junction_2	68	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTCTGCTAGCTAC	NA	False	NA	NA	False	NA	NA	NA	25162424	25161052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25161594_25161940_25162141_25162309
tx.10771	chr2	+	2654	12	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	281	306	164	-306	3prime_fragment	FALSE	canonical	3	410	junction_1	50.7055998015966	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTATTTTGTTGGATCC	NA	False	NA	NA	False	NA	NA	NA	25162770	25175621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
tx.10772	chr2	+	2682	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	18	304	18	-304	multi-exon	TRUE	canonical	3	410	junction_2	48.8355374929182	758	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGTTGGATCCCA	NA	False	NA	NA	False	NA	NA	NA	25162507	25175623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
tx.10773	chr2	+	2942	12	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	19	-305	intron_retention	FALSE	canonical	3	416	junction_6	46.7767689745934	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTATTTTGTTGGATCCC	NA	False	NA	NA	False	NA	NA	NA	25162508	25175622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_25162690_25162926_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
tx.10774	chr2	-	3131	17	ISM	ENSMUSG00000026959.14	ENSMUST00000114317.10	3809	20	7585	4	-6113	-4	3prime_fragment	FALSE	canonical	3	13	junction_1	5.11699069278028	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCCGGGTTTTGTCT	9879	False	NA	NA	False	NA	NA	NA	25201522	25181196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_25182141_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
tx.10775	chr2	-	3604	18	ISM	ENSMUSG00000026959.14	ENSMUST00000114310.10	4276	21	7583	0	-6115	0	3prime_fragment	FALSE	canonical	2	8	junction_2	6.39852924277042	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	9877	False	NA	NA	False	NA	NA	NA	25201524	25181192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_25182497_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
tx.10776	chr2	+	3971	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	105.980213037885	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3963	False	NA	NA	False	NA	NA	NA	25222738	25242224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235203_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
tx.10777	chr2	+	4078	12	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	302	junction_8	32.9823393764572	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3986	False	NA	NA	False	NA	NA	NA	25222761	25242224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
tx.10778	chr2	+	3732	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	22	1	-11	-1	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	559	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGCAGTGTTACTT	3987	False	NA	NA	False	NA	NA	NA	25222762	25242223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
tx.10779	chr2	-	1678	13	FSM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	4	0	-2	0	multi-exon	FALSE	canonical	3	250	junction_10	27.0014145719977	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9005	False	NA	NA	False	NA	NA	NA	25246367	25242301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
tx.1078	chr1	+	1817	12	FSM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	88	3	-4	-3	multi-exon	TRUE	canonical	3	18	junction_1	6.26415751889171	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGACAGCTCCACTTCAC	5510	False	NA	NA	False	NA	NA	NA	172348698	172373434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_172348749_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
tx.10780	chr2	-	1760	12	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	8	2	2	-2	intron_retention	FALSE	canonical	3	250	junction_10	27.0884684684635	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9009	False	NA	NA	False	NA	NA	NA	25246363	25242303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040
tx.10781	chr2	-	1722	9	FSM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	25	1602	25	-1	multi-exon	FALSE	canonical	3	362	junction_3	36.5288841192829	419	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	NA	False	NA	NA	NA	25255669	25251502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
tx.10782	chr2	+	2385	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	8	728	-1	682	multi-exon	FALSE	canonical	3	90	junction_3	10.077477638554	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACGTCTGCATCTTT	6665	False	NA	NA	False	NA	NA	NA	25262340	25267497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
tx.10783	chr2	+	1484	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	0	1	0	-1	multi-exon	FALSE	canonical	3	17	junction_4	4.24264068711928	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTTCTGGGTTCACTG	3126	False	NA	NA	False	NA	NA	NA	25293082	25299505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
tx.10784	chr2	+	8062	48	FSM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	-29	0	-29	0	multi-exon	TRUE	canonical	3	27	junction_14	9.25265307651151	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACCTGTGGGAGCCTGTG	NA	False	NA	NA	False	NA	NA	NA	25318685	25338552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
tx.10785	chr2	+	2294	9	FSM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	94	0	-15	0	multi-exon	FALSE	canonical	3	164	junction_1	35.5176012703561	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	25390855	25395483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
tx.10786	chr2	+	3342	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-14	0	intron_retention	FALSE	canonical	3	227	junction_5	21.7649784220956	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	25390856	25395483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
tx.10787	chr2	+	3656	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	231	junction_2	20.763884243775	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	25390855	25395483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
tx.10788	chr2	+	4459	3	FSM	ENSMUSG00000015095.13	ENSMUST00000148845.2	870	3	-3066	-523	-18	-3	multi-exon	FALSE	canonical	3	266	junction_2	14.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	25390852	25395480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25394340_25394428_25394642_25394721
tx.10789	chr2	-	2131	11	FSM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	32	881	2	3	multi-exon	FALSE	canonical	3	80	junction_10	20.6164982477626	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTGGTGTTCATCTGG	NA	False	NA	NA	False	NA	NA	NA	25436920	25408874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877_25429097_25436873
tx.1079	chr1	+	2993	10	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	68232	26	-85	-18	3prime_fragment	FALSE	canonical	3	10	junction_1	34.5450144694044	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGATTCAGAAAGTTAG	NA	False	NA	NA	False	NA	NA	NA	173246676	173293580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
tx.10790	chr2	-	2083	10	ISM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	7855	883	55	1	3prime_fragment	FALSE	canonical	3	106	junction_2	15.0562730456342	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGAGTGGTGTTCATCT	NA	False	NA	NA	False	NA	NA	NA	25429097	25408876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877
tx.10791	chr2	-	2129	11	FSM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	22	0	22	0	multi-exon	FALSE	canonical	3	14	junction_9	38.6141165896619	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	NA	False	NA	NA	NA	25436900	25408877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428856_25429097_25436873
tx.10792	chr2	+	713	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	9	0	9	0	multi-exon	FALSE	canonical	3	2396	junction_4	232.166965781095	579	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCCTGGATTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	25447867	25452094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
tx.10793	chr2	-	628	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	309	0	-37	0	multi-exon	FALSE	canonical	3	774	junction_2	2.5	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	5509	False	NA	NA	False	NA	NA	NA	25464927	25463441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25463712_25464199_25464325_25464694
tx.10794	chr2	-	4157	14	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	286	junction_8	24.2123250926162	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	3272	False	NA	NA	False	NA	NA	NA	25498479	25473029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
tx.10795	chr2	-	3191	15	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	84.9903055696138	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	3274	False	NA	NA	False	NA	NA	NA	25498477	25473029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488139_25488210_25491362_25491411_25492432_25492568_25498124
tx.10796	chr2	-	3175	15	FSM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	55	0	-1	0	multi-exon	FALSE	canonical	3	258	junction_7	28.5093074669466	577	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	3273	False	NA	NA	False	NA	NA	NA	25498478	25473029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
tx.10797	chr2	-	779	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	-15	31	-15	6	multi-exon	FALSE	canonical	3	29	junction_4	9.85837207656518	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTCTGAAGCAATTAAACA	NA	False	NA	NA	False	NA	NA	NA	25512032	25510109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
tx.10798	chr2	-	843	5	NNC	ENSMUSG00000026939.13	novel	975	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	17.3403431338598	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGCTCTGAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	25512021	25510115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511768_25511945
tx.10799	chr2	-	4317	7	NIC	ENSMUSG00000026933.18	novel	5464	15	NA	NA	-4231	288	combination_of_known_junctions	FALSE	canonical	3	102	junction_4	19.2006944318862	42	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGGTTGTCACAA	NA	False	NA	NA	False	NA	NA	NA	25829804	25818254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957
tx.108	chr1	-	6958	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	443	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	37.2287468475201	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	NA	False	NA	NA	NA	30912979	30842183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30902067_30902337_30912658
tx.1080	chr1	+	2224	9	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	69708	334	-11	-326	3prime_fragment	FALSE	canonical	3	62	junction_1	21.7884000100971	60	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGATATCATTCTTC	NA	False	NA	NA	False	NA	NA	NA	173248152	173293272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
tx.10800	chr2	-	6574	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	4	287	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	116	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTGGTTGTCACA	NA	False	NA	NA	False	NA	NA	NA	25873290	25818255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
tx.10801	chr2	-	6416	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	18	285	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	30.5170262130649	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGTGTGTGGTTGTCA	NA	False	NA	NA	False	NA	NA	NA	25873276	25818257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
tx.10802	chr2	-	6321	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	13	284	combination_of_known_junctions	FALSE	canonical	3	6	junction_16	31.7755802464723	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCATGTGTGTGGTTGTC	NA	False	NA	NA	False	NA	NA	NA	25873281	25818258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25873034
tx.10803	chr2	-	1851	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	1	0	1	0	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	732	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	25911758	25888554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
tx.10804	chr2	-	1710	9	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	240.477617201685	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	25911756	25888554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25889080_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
tx.10805	chr2	-	1988	5	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	8	2087	intron_retention	FALSE	canonical	2	7	junction_4	16.3458710382775	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGAGACTAGTGTCCCTG	8907	False	NA	NA	False	NA	NA	NA	26012822	25948988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_26012700
tx.10806	chr2	-	2847	7	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	8	2087	intron_retention	FALSE	canonical	2	11	junction_5	12.0611866009204	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGAGACTAGTGTCCCTG	8907	False	NA	NA	False	NA	NA	NA	26012822	25948988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980173_25980253_25980495_26012700
tx.10807	chr2	-	2943	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	-8	3443	-8	2086	multi-exon	FALSE	canonical	3	39	junction_4	3.79473319220206	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAGAGACTAGTGTCCCT	8891	False	NA	NA	False	NA	NA	NA	26012838	25948989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
tx.10808	chr2	-	2466	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	17	0	17	0	multi-exon	FALSE	canonical	3	70	junction_1	0	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	False	NA	NA	False	NA	NA	NA	26030516	26026825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26028926_26030150
tx.10809	chr2	-	3391	9	FSM	ENSMUSG00000036327.19	ENSMUST00000091263.12	4011	9	127	493	127	-5	multi-exon	FALSE	canonical	3	117	junction_2	7.20134536041704	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTGTTTCAGTTTTT	7547	False	NA	NA	False	NA	NA	NA	26115256	26099141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160
tx.1081	chr1	+	2072	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	1	-326	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	29.5379382475888	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGATATCATTCTTC	NA	False	NA	NA	False	NA	NA	NA	173248164	173293272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
tx.10810	chr2	-	2417	13	FSM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	139	3	139	-3	multi-exon	FALSE	canonical	3	18	junction_1	31.8210054663408	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTTTCAGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	26127398	26099139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26099806_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
tx.10811	chr2	-	3895	12	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	139	-5	intron_retention	FALSE	canonical	3	117	junction_2	7.1269480445526	268	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTGTTTCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	26127398	26099141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
tx.10812	chr2	+	3397	14	FSM	ENSMUSG00000026930.16	ENSMUST00000066936.9	3384	14	-13	0	-13	0	multi-exon	FALSE	canonical	1	3	junction_2	5.66521619677599	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	False	NA	NA	False	NA	NA	NA	26205513	26238249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230597_26234613_26234771_26235162_26235372_26236818
tx.10813	chr2	+	3217	13	FSM	ENSMUSG00000026930.16	ENSMUST00000078616.12	3127	13	-90	0	-13	0	multi-exon	FALSE	canonical	1	3	junction_2	5.58954877924467	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	False	NA	NA	False	NA	NA	NA	26205513	26238249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26234613_26234771_26235162_26235372_26236818
tx.10814	chr2	-	2755	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	11	0	11	0	multi-exon	FALSE	canonical	3	60	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCGGGGCGGCCACCAT	NA	False	NA	NA	False	NA	NA	NA	26242101	26238132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26240571_26241784
tx.10815	chr2	-	2894	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	20	2	10	-2	multi-exon	FALSE	canonical	3	313	junction_2	24.5	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGCGGGGCGGCCACC	NA	False	NA	NA	False	NA	NA	NA	26242102	26238134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26240571_26241346_26241487_26241784
tx.10816	chr2	-	4351	23	FSM	ENSMUSG00000036281.14	ENSMUST00000114115.9	4368	23	15	2	1	0	multi-exon	FALSE	canonical	3	40	junction_10	11.6217948571845	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATAGCCTTTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	26270646	26252778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
tx.10817	chr2	-	2254	3	ISM	ENSMUSG00000036281.14	ENSMUST00000149850.8	4459	24	14142	-7	1280	-2	intron_retention	FALSE	canonical	3	55	junction_2	16	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	26256502	26252780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26253033_26253649_26253781_26254631
tx.10818	chr2	-	2529	8	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	-1	3	intron_retention	FALSE	canonical	3	27	junction_7	113.093784451811	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	NA	False	NA	NA	NA	26279317	26272810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278597
tx.10819	chr2	-	2145	10	NNC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	2	4	intron_retention	FALSE	canonical	2	11	junction_9	120.630852061717	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTCTTGTCATTTACTC	NA	False	NA	NA	False	NA	NA	NA	26279314	26272809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279040_26279160
tx.1082	chr1	-	1602	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	30	1004	30	0	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	786	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTTTTAAAATTTAATT	822	False	NA	NA	False	NA	NA	NA	175453171	175428943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
tx.10820	chr2	-	2207	7	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	2	3	intron_retention	FALSE	canonical	3	120	junction_6	87.5817078821574	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	NA	False	NA	NA	NA	26279314	26272810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277684_26279160
tx.10821	chr2	-	2182	10	FSM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	11	0	-1	0	multi-exon	FALSE	canonical	3	51	junction_9	111.566621850404	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	26279317	26272813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
tx.10822	chr2	-	1294	4	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	159.674669249697	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	26279305	26272813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_26273707_26274693_26274834_26277567_26277684_26279160
tx.10823	chr2	-	1960	8	FSM	ENSMUSG00000026927.18	ENSMUST00000077983.13	1955	8	-5	0	2	0	multi-exon	FALSE	canonical	3	120	junction_7	82.5556089640708	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	26279314	26272813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26279160
tx.10824	chr2	-	2265	9	ISM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	11	0	-1	0	intron_retention	FALSE	canonical	3	96	junction_8	85.196739227508	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	26279317	26272813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927
tx.10825	chr2	-	2030	9	FSM	ENSMUSG00000026927.18	ENSMUST00000028293.12	2031	9	1	0	1	0	multi-exon	FALSE	canonical	3	146	junction_8	70.8147892392543	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	26279315	26272813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
tx.10826	chr2	+	3127	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	8	0	-1	0	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	1216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGCCCCTAGGTGT	652	False	NA	NA	False	NA	NA	NA	26279358	26287134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
tx.10827	chr2	+	2456	7	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	3097	-1	1509	1	3prime_fragment	FALSE	canonical	3	1351	junction_2	91.9518291764165	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGCCCCTAGGTGTC	3741	False	NA	NA	False	NA	NA	NA	26282447	26287135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
tx.10828	chr2	-	3669	11	NIC	ENSMUSG00000026925.17	novel	2790	11	NA	NA	12	9	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	12.6826653350153	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCAGTTTGGTGCTTC	1014	False	NA	NA	False	NA	NA	NA	26299184	26286518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778_26298822_26299013
tx.10829	chr2	-	3980	9	NIC	ENSMUSG00000026925.17	novel	4147	10	NA	NA	-24	9	intron_retention	FALSE	canonical	3	30	junction_1	7.94414092271782	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCAGTTTGGTGCTTC	959	False	NA	NA	False	NA	NA	NA	26299239	26286518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_26287984_26288567_26288705_26289244_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
tx.1083	chr1	-	1789	4	FSM	ENSMUSG00000026525.10	ENSMUST00000027809.8	1913	4	118	6	118	-6	multi-exon	FALSE	canonical	3	10	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAGGCTGTTGTCATGT	NA	False	NA	NA	False	NA	NA	NA	175520224	175489992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_175490721_175491092_175491345_175492875_175493196_175519735
tx.10830	chr2	-	3886	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	1	260	1	7	multi-exon	FALSE	canonical	3	30	junction_1	7.99228022593531	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCAGCAGTTTGGTGCT	987	False	NA	NA	False	NA	NA	NA	26299211	26286520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
tx.10831	chr2	-	8799	31	FSM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	-5	3	-3	-1	multi-exon	FALSE	canonical	3	86	junction_3	26.343373613365	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTATGGCTTCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	26335231	26299445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
tx.10832	chr2	-	8735	30	FSM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	0	2	0	-2	multi-exon	FALSE	canonical	3	97	junction_2	23.0104665219992	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTATGGCTTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	26335228	26299446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
tx.10833	chr2	-	7892	30	ISM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	3902	7	-1557	-5	3prime_fragment	FALSE	canonical	3	86	junction_3	26.7850917769235	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAATTTATGGCTTCCT	NA	False	NA	NA	False	NA	NA	NA	26331324	26299449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398
tx.10834	chr2	-	4575	9	ISM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	35848	7	-361	-7	3prime_fragment	FALSE	canonical	3	44	junction_6	3.96665791315561	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAACTTGGAGTGTGGT	2907	False	NA	NA	False	NA	NA	NA	26357986	26347921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640
tx.10835	chr2	-	4036	7	ISM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	38307	0	648	0	3prime_fragment	TRUE	canonical	3	44	junction_6	3.90156663690654	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGTGTGGTTTGGTTC	5366	False	NA	NA	False	NA	NA	NA	26355527	26347914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361
tx.10836	chr2	-	5049	10	ISM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	35180	0	-1029	0	3prime_fragment	FALSE	canonical	3	44	junction_6	5.62621728940985	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGTGTGGTTTGGTTC	2239	False	NA	NA	False	NA	NA	NA	26358654	26347914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243
tx.10837	chr2	-	9490	34	FSM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	-6	4	-4	-4	multi-exon	TRUE	canonical	3	26	junction_31	9.72382644510991	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTGGAGTGTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	26393840	26347918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
tx.10838	chr2	+	1118	8	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	112.260811487885	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	153	False	NA	NA	False	NA	NA	NA	26476622	26482694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26482129_26482293_26482429
tx.10839	chr2	+	1119	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	105.177751330783	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	178	False	NA	NA	False	NA	NA	NA	26476647	26482694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482254_26482429
tx.1084	chr1	-	6930	2	FSM	ENSMUSG00000078185.4	ENSMUST00000104984.4	6905	2	-28	3	-28	-3	multi-exon	FALSE	canonical	3	18	junction_1	0	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGTGCTCAATTGAT	NA	False	NA	NA	False	NA	NA	NA	175520224	175509805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_175516247_175519735
tx.10840	chr2	+	1163	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	1	-1	1	0	multi-exon	FALSE	canonical	3	256	junction_1	46.4239970273995	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	173	False	NA	NA	False	NA	NA	NA	26476642	26482694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
tx.10841	chr2	-	1330	6	FSM	ENSMUSG00000026922.14	ENSMUST00000131940.8	1273	6	-80	23	41	-23	multi-exon	FALSE	canonical	3	206	junction_5	210.357219985433	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGAGGTCTCTTTCAG	9522	False	NA	NA	False	NA	NA	NA	26494303	26483091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494135
tx.10842	chr2	-	1422	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	52	15	52	-15	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTTTCAGAGAGTGGG	9533	False	NA	NA	False	NA	NA	NA	26494292	26483083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
tx.10843	chr2	+	1606	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	14	2	14	-2	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGGGTATGTGGATCCT	2449	False	NA	NA	False	NA	NA	NA	26518482	26526507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
tx.10844	chr2	-	742	4	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_3	6.37704215656966	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGAATCTTTCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	26530256	26527187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_-_26527646_26528052_26528108_26529441_26529484_26530069
tx.10845	chr2	-	1880	7	NNC	ENSMUSG00000015787.16	novel	1811	6	NA	NA	64	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	1.7950549357115	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTCTGCCTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	26746746	26732512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_26733887_26735967_26736103_26736585_26736622_26738262_26738320_26738932_26739003_26746433_26746565_26746669
tx.10846	chr2	-	2637	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	-3	337	-3	0	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	300	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTGTTCGTATTTG	NA	False	NA	NA	False	NA	NA	NA	26792894	26780783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
tx.10847	chr2	-	3468	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	35	3	35	-3	multi-exon	FALSE	canonical	3	168	junction_1	2.5	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTGTCTGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	26800654	26795276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26798314_26799004_26799086_26800304
tx.10848	chr2	-	1386	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	-91	-322	17	-4	multi-exon	FALSE	canonical	3	133	junction_1	17.7951304200522	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTTGTCTGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	26800672	26795277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
tx.10849	chr2	+	883	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	25	6	25	-6	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTGCCTTTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	26800800	26803324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
tx.1085	chr1	+	2834	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	210	4752	-3	5	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	318	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9763	False	NA	NA	False	NA	NA	NA	175708356	175736303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
tx.10850	chr2	+	1037	7	NIC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	4686	junction_6	264.743114483959	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTGCCTTTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	26800821	26803324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
tx.10851	chr2	-	1062	8	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	328	junction_3	29.0460577254084	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	NA	False	NA	NA	NA	26806360	26803394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
tx.10852	chr2	-	960	9	NNC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	108.788498932562	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	NA	False	NA	NA	NA	26806365	26803394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804224_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
tx.10853	chr2	-	994	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	179	0	-6	0	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	NA	False	NA	NA	NA	26806363	26803394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
tx.10854	chr2	+	1193	6	FSM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	10	0	-4	0	multi-exon	TRUE	canonical	3	245	junction_5	33.4388995034227	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTGTATCATTGTT	NA	False	NA	NA	False	NA	NA	NA	26806388	26810195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
tx.10855	chr2	-	2812	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	469	0	-76	0	multi-exon	TRUE	canonical	3	778	junction_1	38.262252939418	647	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGGTCCTATATGG	NA	False	NA	NA	False	NA	NA	NA	26823471	26810051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
tx.10856	chr2	-	3565	7	ISM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	44	0	-18	0	intron_retention	FALSE	canonical	3	152	junction_5	25.8182751812226	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	26854354	26843574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394
tx.10857	chr2	-	2243	3	FSM	ENSMUSG00000052406.15	ENSMUST00000123126.2	644	3	-836	-763	-836	0	multi-exon	FALSE	canonical	3	192	junction_1	5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	26847434	26843574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26844609_26845506_26845582_26846300
tx.10858	chr2	-	2235	8	FSM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	46	0	-16	0	multi-exon	FALSE	canonical	3	152	junction_5	23.9344342497821	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	26854352	26843574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
tx.10859	chr2	-	1920	4	NIC	ENSMUSG00000052406.15	novel	1121	7	NA	NA	-18	618	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	78.3893416791396	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAATGGGCACGTGCT	NA	False	NA	NA	False	NA	NA	NA	26854354	26847429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_26848580_26850614_26850753_26852394_26852736_26854063
tx.1086	chr1	+	2987	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-2	5	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	73.1663257550206	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9764	False	NA	NA	False	NA	NA	NA	175708357	175736303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
tx.10860	chr2	+	2679	5	FSM	ENSMUSG00000015488.15	ENSMUST00000114007.8	2689	5	13	-3	13	3	multi-exon	FALSE	canonical	3	80	junction_3	7.54983443527075	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTGCCTGTCACCTG	NA	False	NA	NA	False	NA	NA	NA	26899950	26911104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_26900118_26904104_26904178_26905495_26905622_26908384_26908493_26908899
tx.10861	chr2	-	5156	26	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.2438197124226	52	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTTAGCCTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	27317066	27152115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
tx.10862	chr2	-	3327	23	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-30	2	intron_retention	FALSE	canonical	0	0	junction_6	15.0360448465712	4	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCCCGTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27317075	27159590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
tx.10863	chr2	+	1597	2	NNC	ENSMUSG00000109946.2	novel	509	2	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	27332523	27334233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_27332827_27332939
tx.10864	chr2	-	5322	13	FSM	ENSMUSG00000026918.17	ENSMUST00000113941.9	5289	13	-14	-19	-1	-2	multi-exon	FALSE	canonical	2	24	junction_5	87.0507514805779	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTGTCTGTGTGGTGCT	NA	False	NA	NA	False	NA	NA	NA	27365699	27335592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27343411_27343463_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
tx.10865	chr2	-	5162	11	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	11205	0	-77	0	3prime_fragment	FALSE	canonical	3	192	junction_7	31.5949363031483	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTGTGGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	27354205	27335590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900
tx.10866	chr2	-	5565	12	FSM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	-143	-3	66	3	multi-exon	TRUE	canonical	1	2	junction_11	79.362022268289	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTGGTGCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	27365553	27335587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365153
tx.10867	chr2	-	5240	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	31	1	-1	-1	multi-exon	FALSE	canonical	3	192	junction_7	30.2258714644446	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTGTGTGGTGCTC	NA	False	NA	NA	False	NA	NA	NA	27365667	27335591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
tx.10868	chr2	+	2786	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	408.12498085758	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	27405193	27426547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_27405293_27408719_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
tx.10869	chr2	+	2864	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	26	0	26	0	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	1546	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	27405194	27426547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
tx.1087	chr1	+	2581	18	FSM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	195	0	195	0	multi-exon	FALSE	canonical	1	6	junction_6	3.6941925807312	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTGTTCCGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	176642420	176848003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
tx.10870	chr2	+	2768	13	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	3470	0	-1134	0	3prime_fragment	FALSE	canonical	3	1324	junction_3	118.150210419712	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	27408638	27426547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
tx.10871	chr2	+	3534	2	NNC	ENSMUSG00000085929.2	novel	803	2	NA	NA	-34	2726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCCTGTGTGCATCT	NA	False	NA	NA	False	NA	NA	NA	27430403	27436100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_27430578_27432740
tx.10872	chr2	+	4872	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	16	17	16	-17	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCATTCGGTTCTCATCT	NA	False	NA	NA	False	NA	NA	NA	27567228	27652952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
tx.10873	chr2	+	6505	66	FSM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	-53	1954	-53	131	multi-exon	TRUE	canonical	2	10	junction_13	12.1052973880063	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAAGTGTGCCTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	27776383	27927572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_27776937_27812028_27812197_27818053_27818268_27819390_27819554_27839638_27839771_27840638_27840771_27841298_27841539_27842284_27842459_27842980_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
tx.10874	chr2	+	2757	6	FSM	ENSMUSG00000026833.19	ENSMUST00000028177.11	2757	6	-2	2	-2	-2	multi-exon	FALSE	canonical	3	35	junction_4	5.85149553533112	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCGATTTGCTTATTGT	201	False	NA	NA	False	NA	NA	NA	28095668	28120746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28096112_28098089_28098240_28102543_28102700_28104620_28104841_28112562_28112670_28119065
tx.10875	chr2	+	5755	4	FSM	ENSMUSG00000035829.14	ENSMUST00000128199.8	617	4	-136	-5002	-136	0	multi-exon	FALSE	canonical	2	11	junction_1	2.16024689946929	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	28336675	28345520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28336909_28337896_28337995_28338703_28338921_28340313
tx.10876	chr2	+	6781	3	FSM	ENSMUSG00000035829.14	ENSMUST00000189694.2	5463	3	-1317	-1	-176	1	multi-exon	FALSE	canonical	3	12	junction_2	2	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTCCTTTGTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	28336635	28345518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28337995_28338703_28338921_28340313
tx.10877	chr2	-	805	3	FSM	ENSMUSG00000026831.17	ENSMUST00000086370.11	812	3	5	2	5	-2	multi-exon	FALSE	canonical	3	128	junction_1	7	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGCCACGCCTCTTA	NA	False	NA	NA	False	NA	NA	NA	28356339	28352014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_28352447_28355148_28355228_28356045
tx.10878	chr2	+	2065	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	3	12	3	1	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	316	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGTGTCAGACTCTCT	NA	False	NA	NA	False	NA	NA	NA	28358080	28361178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
tx.10879	chr2	+	3880	8	Fusion	ENSMUSG00000026829.10_ENSMUSG00000063611.6	novel	1335	7	NA	NA	-17484	-1	multi-exon	FALSE	canonical	1	1	junction_2	2.0995626366713	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTTGCCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	28369418	28397784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr2_+_28369616_28386911_28387077_28387680_28387849_28388387_28388454_28392078_28392130_28392208_28392245_28393137_28393273_28394722
tx.1088	chr1	-	7583	14	FSM	ENSMUSG00000019699.17	ENSMUST00000111159.2	4906	14	-672	-2005	-672	-38	multi-exon	FALSE	canonical	3	17	junction_13	3.68910117177901	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATGATAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	177086441	176847676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085711
tx.10880	chr2	+	3761	18	FSM	ENSMUSG00000026821.17	ENSMUST00000028170.15	3590	18	-181	10	20	1	multi-exon	FALSE	canonical	3	33	junction_3	10.8097738677858	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGTCACTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	28403156	28443083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
tx.10881	chr2	+	3746	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	12.5469361015481	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGTCACTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	28403135	28443083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
tx.10882	chr2	-	2618	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	117	4	27	-4	multi-exon	TRUE	canonical	3	147	junction_7	20.5992858738452	179	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCACTGGTGTTTGATG	NA	False	NA	NA	False	NA	NA	NA	28473174	28456326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
tx.10883	chr2	+	4014	23	FSM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	6	3654	0	-1035	multi-exon	FALSE	canonical	3	21	junction_1	11.5017066645932	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCAGACAACTGGGTGGC	3458	False	NA	NA	False	NA	NA	NA	28531254	28577525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
tx.10884	chr2	+	3960	23	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	-2	-1069	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	13.3695101500725	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGTCCAATATGCCA	3463	False	NA	NA	False	NA	NA	NA	28531259	28577491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
tx.10885	chr2	+	4901	23	NIC	ENSMUSG00000026812.17	novel	7702	23	NA	NA	1	-176	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	10.8204734012935	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTTGCCTGATATTCT	3459	False	NA	NA	False	NA	NA	NA	28531255	28578384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
tx.10886	chr2	+	4872	23	FSM	ENSMUSG00000026812.17	ENSMUST00000113867.9	7682	23	10	2800	-1	-181	multi-exon	FALSE	canonical	2	11	junction_16	12.8165698535106	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAATTGTTGCCTGAT	3468	False	NA	NA	False	NA	NA	NA	28531264	28578379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
tx.10887	chr2	+	1840	13	FSM	ENSMUSG00000026807.9	ENSMUST00000074156.7	1567	13	-273	0	-273	0	multi-exon	FALSE	canonical	0	0	junction_4	2.54405625374562	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGCCTTCTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	28589902	28703177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28590287_28592700_28592786_28599938_28599989_28602286_28602401_28606428_28606498_28623818_28623901_28624385_28624458_28625514_28625716_28629544_28629677_28632671_28632762_28649953_28650096_28699671_28699753_28702839
tx.10889	chr2	-	7563	7	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	-333	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	102.107378120617	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATTTTTTTTTATTCTT	NA	False	NA	NA	False	NA	NA	NA	28730705	28712310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28726422_28726529_28729894
tx.1089	chr1	-	6887	13	FSM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	-115	-2037	-77	-5	multi-exon	FALSE	canonical	3	18	junction_7	3.523729085311	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATGGGTATTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	177076448	176847643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241
tx.10890	chr2	-	6993	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-51	-1	15	1	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGGGATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	28730349	28712315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
tx.10891	chr2	-	7098	6	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	14	2	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	92.4588557143122	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGGGATTTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	28730350	28712314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28729894
tx.10892	chr2	-	7082	6	FSM	ENSMUSG00000035666.15	ENSMUST00000171404.8	7127	6	39	6	31	0	multi-exon	FALSE	canonical	2	8	junction_4	103.395551161547	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	28730333	28712316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726422_28726529_28729894
tx.10893	chr2	-	6868	4	NIC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	89.7416043736435	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAAGGGGATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	28730357	28712317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_28716810_28717489_28717579_28723561_28725386_28729894
tx.10894	chr2	+	3277	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-6	0	-6	0	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGGACTCAGCAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	28730464	28795583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
tx.10895	chr2	+	3943	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	11.9745099644574	79	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGTGAAATGACTT	NA	False	NA	NA	False	NA	NA	NA	28950274	28977665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
tx.10896	chr2	+	5581	12	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	2674	-3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_5	9.26826987340577	17	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGTGAAATGACTT	NA	False	NA	NA	False	NA	NA	NA	28952951	28977665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
tx.10897	chr2	+	3779	11	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	5573	0	intron_retention	FALSE	canonical	3	70	junction_4	9.71390755566471	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	NA	False	NA	NA	NA	28955850	28977668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
tx.10898	chr2	+	10844	26	FSM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	125	1	125	-1	multi-exon	FALSE	canonical	3	142	junction_8	57.9545477076648	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGGTTAGAAGTACTC	NA	False	NA	NA	False	NA	NA	NA	29015128	29072482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
tx.10899	chr2	+	1672	4	ISM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	170	51310	170	712	5prime_fragment	FALSE	canonical	3	157	junction_1	22.939534045447	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAATACTTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	29015173	29021173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191
tx.109	chr1	-	5816	13	ISM	ENSMUSG00000048874.16	ENSMUST00000088310.10	7561	15	32291	719	-222	485	3prime_fragment	FALSE	canonical	3	124	junction_8	16.9187190873173	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGCTTCTTCTCAAGAC	5871	False	NA	NA	False	NA	NA	NA	30870046	30842141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923
tx.1090	chr1	+	3859	3	NIC	ENSMUSG00000063659.12	novel	646	3	NA	NA	-52	2	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	2.5	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTTGTGTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	177269864	177278328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_177270162_177274654_177275343_177275454
tx.10900	chr2	+	10690	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	165	-3	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	71.5650442293971	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	NA	NA	NA	29015168	29072480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
tx.10901	chr2	+	8017	18	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	-11277	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	81.0140745600208	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGGTTAGAAGTACTC	NA	False	NA	NA	False	NA	NA	NA	29035950	29072482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29064330_29064496_29066888_29066988_29067526_29067615_29069411
tx.10902	chr2	+	7629	17	ISM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	21169	2	-11055	-2	3prime_fragment	FALSE	canonical	3	223	junction_2	22.7472525813558	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGGGTTAGAAGTACT	NA	False	NA	NA	False	NA	NA	NA	29036172	29072481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
tx.10903	chr2	+	3260	3	ISM	ENSMUSG00000043535.14	ENSMUST00000145422.2	1141	9	12418	-2931	12418	0	3prime_fragment	FALSE	canonical	3	293	junction_1	0.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTTAGAAGTACTCC	802	False	NA	NA	False	NA	NA	NA	29066887	29072483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_29066988_29067526_29067615_29069411
tx.10904	chr2	+	1246	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	3	5	3	-5	multi-exon	FALSE	canonical	3	144	junction_3	14.0393034305954	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGGCTCTGTGTTCTGC	NA	False	NA	NA	False	NA	NA	NA	29236833	29414800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
tx.10905	chr2	+	5820	24	FSM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	-33	615	-4	0	multi-exon	FALSE	canonical	3	225	junction_2	42.1435569818812	202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	NA	False	NA	NA	NA	29509748	29630375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
tx.10906	chr2	+	5568	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-4	-1	intron_retention	TRUE	canonical	1	2	junction_1	78.6068606977332	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTGTCCAGGCCTT	NA	False	NA	NA	False	NA	NA	NA	29509748	29630374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_29510076_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
tx.10907	chr2	+	5693	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	8	-1	intron_retention	FALSE	canonical	3	94	junction_2	58.96679272801	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTGTCCAGGCCTT	NA	False	NA	NA	False	NA	NA	NA	29509760	29630374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
tx.10908	chr2	-	192	2	Antisense	novelGene_ENSMUSG00000039844.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCCAAGGACAGCATGG	NA	False	NA	NA	False	NA	NA	NA	29599115	29585536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_29585581_29598967
tx.10909	chr2	-	2372	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.2362155894325	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	29677668	29666117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_29666505_29666698_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
tx.1091	chr1	+	3985	2	FSM	ENSMUSG00000063659.12	ENSMUST00000195002.2	394	2	-64	-3527	-64	0	multi-exon	FALSE	canonical	3	20	junction_1	0	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGCTTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	177269852	177278330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_177270162_177274654
tx.10910	chr2	-	2788	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	-1	1143	-1	283	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTCTGGGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	29677673	29665838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
tx.10911	chr2	-	3349	7	NIC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	126	junction_1	24.0791518861349	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29677680	29666121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
tx.10912	chr2	-	2564	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	844	0	2	0	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29677670	29666121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
tx.10913	chr2	-	2314	8	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.4944959851495	5	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29677680	29666121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_29666388_29666585_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
tx.10914	chr2	-	2377	10	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	69.5021093915612	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29677680	29666121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_29666232_29666386_29666544_29666585_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
tx.10915	chr2	-	2238	8	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	75.5907347740017	6	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29677679	29666121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_29666388_29666585_29667969_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
tx.10916	chr2	+	1260	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	-4	735	-4	22	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTCCCTTTGCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	29678266	29687020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
tx.10917	chr2	+	2960	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	28	1066	28	-1066	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACAGCCTGGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	29692673	29706468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
tx.10918	chr2	+	3661	12	ISM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	1553	39	1553	-39	3prime_fragment	FALSE	canonical	3	148	junction_3	11.6569420312817	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTTGAAGCAGGTCT	NA	False	NA	NA	False	NA	NA	NA	29694198	29707495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
tx.10919	chr2	+	1225	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	31	940	12	-2	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	NA	False	NA	NA	NA	29717384	29734074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
tx.1092	chr1	+	4142	2	NNC	ENSMUSG00000063659.12	novel	646	3	NA	NA	-45	0	intron_retention	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGCTTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	177269871	177278330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_177270338_177274654
tx.10920	chr2	+	2721	12	FSM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	-4	-2	-4	2	multi-exon	FALSE	canonical	2	9	junction_10	4.78288961380578	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGCTGAGCCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	29759501	29772854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
tx.10921	chr2	+	3668	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	268.155761574078	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7208	False	NA	NA	False	NA	NA	NA	29779811	29821758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
tx.10922	chr2	+	2116	16	NIC	ENSMUSG00000026790.20	novel	2364	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	278.954476572791	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7204	False	NA	NA	False	NA	NA	NA	29779807	29812551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
tx.10923	chr2	+	3764	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	193.045616370846	347	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7209	False	NA	NA	False	NA	NA	NA	29779812	29821758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
tx.10924	chr2	+	3820	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	7	-1	4	0	multi-exon	FALSE	canonical	3	577	junction_4	191.01803579767	302	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7210	False	NA	NA	False	NA	NA	NA	29779813	29821758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
tx.10925	chr2	+	3067	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	14	949	12	-949	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	353	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATATGTGGTTACC	NA	False	NA	NA	False	NA	NA	NA	29825451	29849434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
tx.10926	chr2	-	1808	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	1	5	1	-5	multi-exon	FALSE	canonical	3	156	junction_3	11.9973955507018	140	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACCTGAGAGCCCCAAG	NA	False	NA	NA	False	NA	NA	NA	29938892	29921562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
tx.10927	chr2	+	2574	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	246	4	246	-4	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	9432	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	NA	False	NA	NA	NA	29952110	29962585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
tx.10928	chr2	+	2826	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	1	7	1	-7	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	4675	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGGGGTCATTCT	NA	False	NA	NA	False	NA	NA	NA	29956468	29962582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
tx.10929	chr2	+	2990	22	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-24	0	combination_of_known_junctions	TRUE	canonical	3	77	junction_7	19.7860437769826	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTGTGTAGTGTCTAG	1353	False	NA	NA	False	NA	NA	NA	29967730	29981034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
tx.1093	chr1	+	3566	2	ISM	ENSMUSG00000063659.12	ENSMUST00000193480.2	3734	3	2434	0	1266	0	3prime_fragment	FALSE	canonical	3	15	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGCTTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	177274652	177278330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_177275343_177275454
tx.10930	chr2	+	3489	21	FSM	ENSMUSG00000026785.15	ENSMUST00000148650.8	3460	21	-23	-6	-23	0	multi-exon	FALSE	canonical	3	77	junction_6	20.1955440629858	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGGTTGTGTAGTGTC	1354	False	NA	NA	False	NA	NA	NA	29967731	29981031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
tx.10931	chr2	-	1139	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	25	1	-7	-1	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	309	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTGGACTCTTTC	NA	False	NA	NA	False	NA	NA	NA	29983635	29980956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
tx.10932	chr2	-	4160	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	20.8859335970941	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGTGGTGTCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	30014571	29987294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997512_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
tx.10933	chr2	-	4168	16	FSM	ENSMUSG00000039686.15	ENSMUST00000113677.3	4189	16	19	2	16	-2	multi-exon	FALSE	canonical	3	68	junction_8	7.41889479639656	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	30014575	29987296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
tx.10934	chr2	+	1021	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	16	26	16	-26	multi-exon	FALSE	canonical	3	314	junction_1	35	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGACCATCTCTACT	NA	False	NA	NA	False	NA	NA	NA	30061520	30064055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30062079_30062853_30062964_30063702
tx.10935	chr2	-	1824	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	-1	-18	-1	0	multi-exon	FALSE	canonical	3	299	junction_5	38.9436974393538	371	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCACCTATGCTCACGT	NA	False	NA	NA	False	NA	NA	NA	30068463	30063464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
tx.10936	chr2	-	2009	11	FSM	ENSMUSG00000039660.17	ENSMUST00000144093.8	2010	11	13	-12	-4	7	multi-exon	FALSE	canonical	3	299	junction_5	40.8044115262063	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGATGCTCACCTAT	NA	False	NA	NA	False	NA	NA	NA	30068458	30063472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067978_30068401
tx.10937	chr2	-	1708	12	ISM	ENSMUSG00000039648.15	ENSMUST00000113661.10	2057	13	4198	-5	-49	0	3prime_fragment	FALSE	canonical	3	127	junction_6	13.3880420309128	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	9487	False	NA	NA	False	NA	NA	NA	30084173	30075137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065
tx.10938	chr2	-	1862	13	FSM	ENSMUSG00000039648.15	ENSMUST00000044038.10	1876	13	14	0	14	0	multi-exon	FALSE	canonical	3	91	junction_12	20.7811011899434	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTTCTCTCTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	30095845	30075135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
tx.10939	chr2	+	4324	4	FSM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	-23	0	-16	0	multi-exon	FALSE	canonical	3	48	junction_3	22.6028513442196	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	NA	False	NA	NA	NA	30127710	30153802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30127818_30130580_30130690_30145179_30147345_30151859
tx.1094	chr1	-	2548	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	8	215	-2	-1	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	1416	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGTGTGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	177624069	177590742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
tx.10940	chr2	+	1299	11	ISM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	98	0	0	0	3prime_fragment	FALSE	canonical	2	39	junction_2	15.9185426468631	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATGTACGGGTACTT	NA	False	NA	NA	False	NA	NA	NA	30156830	30172160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
tx.10941	chr2	+	5691	44	FSM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	16	3	-4	-3	multi-exon	TRUE	canonical	3	896	junction_14	107.189702087653	1706	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4864	False	NA	NA	False	NA	NA	NA	30176424	30234275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
tx.10942	chr2	-	4901	9	NIC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	236	junction_2	45.3782712319454	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	NA	False	NA	NA	NA	30249299	30234820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.10943	chr2	-	5286	8	NIC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	286	junction_4	33.7463527885698	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	NA	False	NA	NA	NA	30249271	30234820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.10944	chr2	-	1812	11	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.33701143064	14	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	NA	False	NA	NA	NA	30249314	30234820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_30235440_30235710_30235952_30236348_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.10945	chr2	-	1794	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	14	2	3	0	multi-exon	FALSE	canonical	3	213	junction_5	55.8	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	NA	False	NA	NA	NA	30249314	30234822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.10946	chr2	-	1711	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	-18	1	6	-1	multi-exon	FALSE	canonical	3	12	junction_5	106.475639131188	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	NA	False	NA	NA	NA	30249295	30234823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.10947	chr2	-	5284	8	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	10	0	intron_retention	FALSE	canonical	3	45	junction_6	107.782850477907	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	NA	False	NA	NA	NA	30249291	30234820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
tx.10948	chr2	-	4605	9	NIC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16	junction_4	109.984942151187	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	NA	False	NA	NA	NA	30249276	30234823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.10949	chr2	-	3678	4	ISM	ENSMUSG00000026860.17	ENSMUST00000151354.8	1823	9	10009	-324	-1640	0	3prime_fragment	FALSE	canonical	3	337	junction_1	18.8384948679264	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	NA	False	NA	NA	NA	30239308	30234822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092
tx.1095	chr1	+	3975	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	121	4706	121	1694	multi-exon	FALSE	canonical	3	163	junction_4	12.7573508221731	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTATAGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	178015218	178080161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
tx.10950	chr2	+	3368	16	FSM	ENSMUSG00000026858.19	ENSMUST00000077977.14	3381	16	11	2	-1	0	multi-exon	TRUE	canonical	3	32	junction_1	8.28385310240484	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	NA	False	NA	NA	NA	30254255	30275531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
tx.10951	chr2	+	2083	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	166	2	4	0	multi-exon	FALSE	canonical	3	287	junction_6	27.7995742149158	383	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	NA	False	NA	NA	NA	30282431	30290539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
tx.10952	chr2	-	2675	4	ISM	ENSMUSG00000026853.16	ENSMUST00000146603.2	3036	8	1586	0	-132	0	3prime_fragment	FALSE	canonical	3	47	junction_2	11.4406682011537	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCACCTCACACTTGG	NA	False	NA	NA	False	NA	NA	NA	30295105	30290487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949
tx.10953	chr2	-	2765	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	232	836	19	561	multi-exon	TRUE	canonical	3	47	junction_2	7.8897731722819	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	NA	False	NA	NA	NA	30305593	30291948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
tx.10954	chr2	+	2567	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	19	0	19	0	multi-exon	TRUE	canonical	3	440	junction_4	51.3501655905104	779	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	NA	False	NA	NA	NA	30306069	30337817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
tx.10955	chr2	+	1190	4	FSM	ENSMUSG00000026857.10	ENSMUST00000138889.8	1192	4	9	-7	-7	7	multi-exon	FALSE	canonical	3	90	junction_2	216.499422632025	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGCAGTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	30697961	30713036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30698096_30709640_30709781_30710460_30710714_30712373
tx.10956	chr2	+	1259	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	119	9	3	7	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	286	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGCAGTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	30697956	30713036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
tx.10957	chr2	-	3063	5	ISM	ENSMUSG00000039483.11	ENSMUST00000129628.8	784	6	-9	-1373	-9	0	intron_retention	FALSE	canonical	3	80	junction_2	14.4460202131937	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTCTTTGTATGACA	1741	False	NA	NA	False	NA	NA	NA	30718286	30713108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934
tx.10958	chr2	-	2099	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	2048	0	6	0	multi-exon	FALSE	canonical	3	80	junction_2	13.3356664625357	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTCTTTGTATGACA	1730	False	NA	NA	False	NA	NA	NA	30718297	30713108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
tx.10959	chr2	+	1237	4	FSM	ENSMUSG00000039476.14	ENSMUST00000041659.7	1441	4	204	0	-181	0	multi-exon	FALSE	canonical	2	7	junction_1	3.55902608401044	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGGCTTCAGAAGGGCA	NA	False	NA	NA	False	NA	NA	NA	30735274	30771263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30735694_30768421_30768604_30769503_30769683_30770806
tx.1096	chr1	+	4051	6	FSM	ENSMUSG00000026502.14	ENSMUST00000161075.8	2590	6	232	-1693	117	1693	multi-exon	FALSE	canonical	3	14	junction_1	77.2321176713419	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTTTTATAGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	178015214	178080160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_178015524_178025783_178025857_178065477_178065551_178070177_178070272_178071906_178072049_178076800
tx.10960	chr2	-	3514	3	FSM	ENSMUSG00000050737.14	ENSMUST00000056046.10	703	3	0	-2811	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTGGTCATGATGTC	9920	False	NA	NA	False	NA	NA	NA	30791800	30779482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30782839_30790878_30790962_30791725
tx.10961	chr2	-	2124	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	14	1509	14	1302	multi-exon	FALSE	canonical	3	78	junction_1	10.5	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTTTCCTGCGTTTTA	8425	False	NA	NA	False	NA	NA	NA	30793295	30780991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30782839_30790878_30790962_30793101
tx.10962	chr2	+	3039	5	NIC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	43.5918570377542	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	30842980	30849027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_30843236_30843763_30844030_30845779_30845966_30846459_30846588_30846823
tx.10963	chr2	+	3028	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	11	0	-9	0	multi-exon	FALSE	canonical	1	21	junction_2	34.4990941910074	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	30842981	30849027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
tx.10964	chr2	+	4392	3	ISM	ENSMUSG00000026848.15	ENSMUST00000133544.8	4775	4	915	-4	142	0	3prime_fragment	FALSE	canonical	3	100	junction_1	0.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	30843905	30849027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_30845966_30846459_30846588_30846823
tx.10965	chr2	-	1367	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	34	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_3	220.841996685413	287	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	30857911	30850638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
tx.10966	chr2	-	1301	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	24	659	24	-659	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	227	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	NA	NA	NA	30871929	30862847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
tx.10967	chr2	+	4110	25	FSM	ENSMUSG00000026854.17	ENSMUST00000102849.11	5088	25	36	942	-19	-938	multi-exon	TRUE	canonical	1	7	junction_21	9.09889721645187	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACTGTGACACTGT	NA	False	NA	NA	False	NA	NA	NA	30872326	30912656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
tx.10968	chr2	+	1626	4	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	-557	-938	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	12.5521135891752	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACTGTGACACTGT	7643	False	NA	NA	False	NA	NA	NA	30909273	30912656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_30909404_30909796_30909900_30910840_30910913_30911335
tx.10969	chr2	-	4710	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	27.5474540061731	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTCTCTGTTGTATGA	4770	False	NA	NA	False	NA	NA	NA	31032018	30916217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
tx.1097	chr1	+	3979	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	134	1694	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	77.032460690283	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTATAGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	178015231	178080161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076783
tx.10970	chr2	-	4718	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	39.4208066888541	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTCTCTGTTGTATGA	4765	False	NA	NA	False	NA	NA	NA	31032023	30916217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_30918896_30923041_30923201_30926129_30926270_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
tx.10972	chr2	-	5429	16	NNC	ENSMUSG00000075415.14	novel	1859	15	NA	NA	-13	-1420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.8143278198627	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTGTATTTTAAGTGA	4755	False	NA	NA	False	NA	NA	NA	31032033	30919626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_30920593_30920625_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
tx.10973	chr2	-	5446	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-204	-3383	2	-1421	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTGTATTTTAAGTG	4770	False	NA	NA	False	NA	NA	NA	31032018	30919627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
tx.10974	chr2	-	1981	9	FSM	ENSMUSG00000075415.14	ENSMUST00000113552.9	1910	9	-67	-4	2	4	multi-exon	FALSE	canonical	3	133	junction_4	13.559475469206	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTGTCTTCTTGTTT	4770	False	NA	NA	False	NA	NA	NA	31032018	30943242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
tx.10975	chr2	+	3899	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	6	2229	6	1980	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	566	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGCAAGTGTTCAACTC	NA	False	NA	NA	False	NA	NA	NA	31042333	31106558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
tx.10976	chr2	+	4225	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	-88	516	-88	-516	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTCCCATCTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	31135746	31185485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
tx.10977	chr2	+	1834	8	ISM	ENSMUSG00000055632.19	ENSMUST00000142448.8	2495	13	7766	-1	-207	0	3prime_fragment	FALSE	canonical	2	7	junction_6	7.07106781186548	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTCTTTGCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	31344512	31350750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
tx.10978	chr2	+	2741	6	NIC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	-207	0	intron_retention	FALSE	canonical	2	13	junction_2	4.8	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTCTTTGCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	31344512	31350750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31349220_31350061
tx.10979	chr2	+	1638	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	56	2	56	-2	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	2389	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	31360274	31410682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
tx.1098	chr1	+	3948	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	134	1697	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	72.980733758986	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	178015231	178080164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071923_178072049_178076800
tx.10980	chr2	+	3202	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	60	6	60	0	multi-exon	TRUE	canonical	3	465	junction_18	67.3624112131124	597	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	553	False	NA	NA	False	NA	NA	NA	31462722	31507532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
tx.10981	chr2	+	1671	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	16	-1	-3	1	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	746	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGAGTCTCACCGCGTG	NA	False	NA	NA	False	NA	NA	NA	31560742	31571362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
tx.10982	chr2	+	6358	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	-34	3	-20	-3	multi-exon	FALSE	canonical	3	69	junction_1	36.9031163995671	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGCTTGGTCTGTGA	5720	False	NA	NA	False	NA	NA	NA	31578528	31693550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
tx.10983	chr2	+	5096	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	9	689	9	-3	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGCTTGGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	31649963	31693550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
tx.10984	chr2	+	3005	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	111	1	-24	-1	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGTGTCTTTGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	31840261	31863453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
tx.10985	chr2	+	4774	27	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	-21	20632	-21	17	intron_retention	FALSE	canonical	3	95	junction_11	15.0262098430882	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGTTGTGAAAGAGATC	NA	False	NA	NA	False	NA	NA	NA	31864426	31921751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718
tx.10986	chr2	+	6604	36	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	4	0	intron_retention	TRUE	canonical	3	95	junction_11	21.2761052136246	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	NA	False	NA	NA	NA	31864451	31942383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
tx.10987	chr2	+	2603	8	FSM	ENSMUSG00000001855.16	ENSMUST00000138012.2	3569	8	-638	1604	-638	0	multi-exon	FALSE	canonical	3	103	junction_2	26.8617017407342	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	NA	False	NA	NA	NA	31923349	31942383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
tx.10988	chr2	-	2996	2	NNC	ENSMUSG00000050592.9	novel	4107	2	NA	NA	4880	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGCTCTGGTGGCAAT	NA	False	NA	NA	False	NA	NA	NA	31964484	31956878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_31959786_31964395
tx.10989	chr2	-	4027	2	FSM	ENSMUSG00000050592.9	ENSMUST00000056406.7	4107	2	80	0	80	0	multi-exon	FALSE	canonical	3	11	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGCTCTGGTGGCAAT	NA	False	NA	NA	False	NA	NA	NA	31973715	31956878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_31959786_31972595
tx.1099	chr1	+	465	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	5	1	5	-1	multi-exon	FALSE	canonical	3	422	junction_3	43.5150037981793	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGTTTTACATGAAATC	NA	False	NA	NA	False	NA	NA	NA	178146699	178150257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
tx.10990	chr2	+	1930	2	FSM	ENSMUSG00000051373.6	ENSMUST00000057423.6	1947	2	12	5	12	-5	multi-exon	FALSE	canonical	2	5	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTTGTCCTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	31985551	32000827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31986275_31999620
tx.10991	chr2	+	8618	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-12	-3	combination_of_known_junctions	TRUE	canonical	3	283	junction_29	60.7166476024171	136	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	6638	False	NA	NA	False	NA	NA	NA	32041081	32124546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
tx.10992	chr2	+	8693	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	239	junction_29	73.1573342567617	113	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	6645	False	NA	NA	False	NA	NA	NA	32041088	32124546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
tx.10993	chr2	+	8599	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	104.328865719044	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	6649	False	NA	NA	False	NA	NA	NA	32041092	32124546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
tx.10994	chr2	+	5825	15	ISM	ENSMUSG00000039262.17	ENSMUST00000069817.15	10671	32	65486	2	556	-2	3prime_fragment	FALSE	canonical	3	239	junction_13	93.2422782270982	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACATGCTTTCTCAGGC	NA	False	NA	NA	False	NA	NA	NA	32106645	32124532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
tx.10995	chr2	+	5139	10	ISM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	68543	1	95	-1	3prime_fragment	FALSE	canonical	3	283	junction_9	74.093034610399	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	32109636	32124548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
tx.10996	chr2	+	2758	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	12	2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	38.3467367871403	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	32126666	32145015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
tx.10997	chr2	+	2866	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	52	0	-1	0	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	NA	False	NA	NA	NA	32126653	32145017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
tx.10998	chr2	-	1941	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	64	0	-34	0	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTCCTGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	32150107	32145013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
tx.10999	chr2	-	731	5	FSM	ENSMUSG00000044627.12	ENSMUST00000183946.8	768	5	37	0	0	0	multi-exon	FALSE	canonical	3	3309	junction_1	124.51380445557	857	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	32178043	32168827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
tx.11	chr1	+	6068	14	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	6	24766	6	624	intron_retention	FALSE	canonical	3	127	junction_3	10.5572544395679	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTTTCACATGATGC	NA	False	NA	NA	False	NA	NA	NA	6284874	6322106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289
tx.110	chr1	-	3019	2	ISM	ENSMUSG00000048874.16	ENSMUST00000088310.10	7561	15	56909	761	2758	443	3prime_fragment	FALSE	canonical	3	185	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	NA	False	NA	NA	NA	30845428	30842183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_30845024_30845249
tx.1100	chr1	-	5567	2	FSM	ENSMUSG00000039630.11	ENSMUST00000159117.2	2640	2	-2927	0	2309	0	multi-exon	FALSE	canonical	3	124	junction_1	0	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGCTTCTCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	178154663	178148672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_178150761_178151184
tx.11000	chr2	-	2308	4	NIC	ENSMUSG00000044627.12	novel	768	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	3426	junction_2	83.7947227190087	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	32178043	32168827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32170816_32171697_32171823_32177608_32177658_32177897
tx.11001	chr2	+	4275	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	28.9025842270203	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	32178261	32197925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
tx.11002	chr2	+	4355	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	-2	8	-2	0	multi-exon	FALSE	canonical	3	80	junction_7	19.1852443299532	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	32178262	32197925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
tx.11003	chr2	-	3806	20	NNC	ENSMUSG00000026825.18	novel	3764	21	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	4.81859279926173	2	3	2	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGTACCTCTGCTGGT	NA	False	NA	NA	False	NA	NA	NA	32243329	32198482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_32199647_32202138_32202355_32202695_32202938_32204901_32205082_32205806_32205923_32206909_32207020_32210515_32210637_32213429_32213486_32213671_32213743_32217972_32218060_32224693_32224833_32225787_32225856_32225949_32226086_32226195_32226339_32227745_32227907_32228012_32228112_32229932_32230137_32230427_32230578_32230844_32230919_32243060
tx.11004	chr2	+	2657	18	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	21.2762355855551	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	NA	False	NA	NA	NA	32253038	32268311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
tx.11005	chr2	+	2726	16	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	23	0	intron_retention	FALSE	canonical	3	47	junction_3	15.4050496771531	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	NA	False	NA	NA	NA	32253044	32268311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
tx.11006	chr2	+	2792	17	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	33	junction_3	18.9699598049126	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	NA	False	NA	NA	NA	32253049	32268310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
tx.11007	chr2	+	2573	17	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	18.9868375460475	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	NA	False	NA	NA	NA	32253049	32268310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
tx.11008	chr2	-	641	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	32	7	32	-7	multi-exon	FALSE	canonical	3	268	junction_1	0	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCCCCTTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	32271918	32269119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32269546_32271703
tx.11009	chr2	+	1610	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	335	3033	-209	1163	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	227	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTCTGACAATGGTGC	7427	False	NA	NA	False	NA	NA	NA	32286242	32292751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
tx.1101	chr1	-	3407	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	12	4221	12	3302	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	8854	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCTAATGGGATCTATA	NA	False	NA	NA	False	NA	NA	NA	178165350	178156128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
tx.11010	chr2	-	3280	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	1	-3	1	0	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8154	False	NA	NA	False	NA	NA	NA	32341456	32304498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
tx.11011	chr2	-	3327	11	FSM	ENSMUSG00000026819.16	ENSMUST00000028160.15	3294	11	-33	0	-10	0	multi-exon	FALSE	canonical	3	9	junction_7	31.7200252206709	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8143	False	NA	NA	False	NA	NA	NA	32341467	32304498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32341078
tx.11012	chr2	+	2901	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1756	-7	1756	7	multi-exon	FALSE	canonical	3	24	junction_1	0	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCTCTTGTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	32342224	32346972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32342962_32344808
tx.11013	chr2	+	4289	11	FSM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	-70	4	-43	2	multi-exon	FALSE	canonical	3	103	junction_7	13.8115893364956	276	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGTTGGTGTTTCT	1539	False	NA	NA	False	NA	NA	NA	32425300	32459764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
tx.11014	chr2	+	866	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	-5	8	-5	-8	multi-exon	FALSE	canonical	3	274	junction_1	58.5965490072202	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4768	False	NA	NA	False	NA	NA	NA	32460864	32463583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
tx.11015	chr2	+	1850	3	NIC	ENSMUSG00000026810.13	novel	869	4	NA	NA	2	7	intron_retention	FALSE	canonical	3	274	junction_1	59.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTCTCTCTGCCATC	4784	False	NA	NA	False	NA	NA	NA	32460880	32463582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32460925_32461217_32462412_32462970
tx.11016	chr2	+	2132	2	FSM	ENSMUSG00000026810.13	ENSMUST00000150419.2	851	2	-1166	-115	14	-8	multi-exon	FALSE	canonical	3	393	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4796	False	NA	NA	False	NA	NA	NA	32460892	32463583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32462412_32462970
tx.11017	chr2	+	1113	3	FSM	ENSMUSG00000026810.13	ENSMUST00000128039.2	655	3	31	-489	31	7	multi-exon	FALSE	canonical	3	393	junction_2	5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTCTCTCTGCCATC	4813	False	NA	NA	False	NA	NA	NA	32460909	32463582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32461308_32462308_32462412_32462970
tx.11018	chr2	+	3647	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-25	4	-25	-4	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCTGTCAACCACTTCC	NA	False	NA	NA	False	NA	NA	NA	32477081	32489706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
tx.11019	chr2	+	2455	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095044.10	2394	7	-61	0	4	0	multi-exon	FALSE	canonical	3	38	junction_2	28.6225435627234	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	3308	False	NA	NA	False	NA	NA	NA	32496976	32510818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
tx.1102	chr1	+	3670	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-90	0	-72	0	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTCTGCTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	178233577	178312078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
tx.11020	chr2	+	2287	5	NIC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	26.3569250862084	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	3330	False	NA	NA	False	NA	NA	NA	32496998	32510818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32497124_32502235_32502416_32504792_32505200_32508508_32508617_32509351
tx.11021	chr2	+	2051	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	14	-2	13	2	multi-exon	FALSE	canonical	3	40	junction_1	98.788775790685	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTGAGTGTATTGAAA	NA	False	NA	NA	False	NA	NA	NA	32515462	32525068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
tx.11022	chr2	+	2016	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	2963	-4	10	0	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	NA	False	NA	NA	NA	32518411	32525070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
tx.11023	chr2	+	2051	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	-11	-6	-11	0	multi-exon	FALSE	canonical	3	94	junction_1	85.0895998345274	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	NA	False	NA	NA	NA	32519504	32525070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
tx.11024	chr2	+	1998	5	ISM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	274	-6	257	0	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	NA	False	NA	NA	NA	32519789	32525070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
tx.11025	chr2	+	2931	15	FSM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	-75	547	-48	4	multi-exon	FALSE	canonical	3	45	junction_1	47.9038684475993	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	507	False	NA	NA	False	NA	NA	NA	32536558	32572134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
tx.11026	chr2	+	2934	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	-48	536	-48	4	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	507	False	NA	NA	False	NA	NA	NA	32536558	32572134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
tx.11027	chr2	-	2254	15	FSM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	19	0	19	0	multi-exon	FALSE	canonical	3	280	junction_8	41.2442327446381	499	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTATTCTCCTAGCTCCC	NA	False	NA	NA	False	NA	NA	NA	32584178	32572620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
tx.11028	chr2	-	1720	7	FSM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	13	0	13	0	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	1106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	32602783	32597449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
tx.11029	chr2	-	1875	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	12	-3	intron_retention	FALSE	canonical	3	1092	junction_4	84.0514128376198	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	32602784	32597452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32598302_32599478_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
tx.1103	chr1	-	967	7	ISM	ENSMUSG00000055067.16	ENSMUST00000068437.13	3360	9	154438	2204	-105057	0	3prime_fragment	FALSE	canonical	3	343	junction_1	12.7758452644912	154	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGACTTGGCTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	178921967	178784814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899
tx.11030	chr2	-	3619	5	FSM	ENSMUSG00000009555.17	ENSMUST00000125058.8	3565	5	-1708	1654	2	0	multi-exon	FALSE	canonical	3	1063	junction_2	100.143646827944	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	32602767	32597449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488
tx.11031	chr2	+	2636	11	FSM	ENSMUSG00000059013.13	ENSMUST00000113242.5	3107	11	-47	518	-47	0	multi-exon	FALSE	canonical	1	2	junction_6	3.98622628559895	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTCCCATGAGGCCT	1498	False	NA	NA	False	NA	NA	NA	32617670	32645006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32617819_32627530_32627571_32634762_32634892_32635846_32636302_32637033_32637159_32639164_32639698_32640963_32641080_32641525_32641698_32642625_32642738_32643000_32643208_32644407
tx.11032	chr2	+	1515	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	21	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	20.9105236663265	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	610	False	NA	NA	False	NA	NA	NA	32647266	32652256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
tx.11033	chr2	+	1429	5	FSM	ENSMUSG00000009563.17	ENSMUST00000156617.8	915	5	0	-514	0	0	multi-exon	FALSE	canonical	3	24	junction_1	95.4214336509361	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	610	False	NA	NA	False	NA	NA	NA	32647266	32652256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32647463_32648768_32648949_32649538_32649715_32650600_32650729_32651507
tx.11034	chr2	+	3309	3	NIC	ENSMUSG00000009563.17	novel	1244	4	NA	NA	-5	0	intron_retention	FALSE	canonical	3	233	junction_2	3	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	626	False	NA	NA	False	NA	NA	NA	32647282	32652256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32649715_32650600_32650729_32651507
tx.11035	chr2	+	1994	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	-5	-1037	-5	1037	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTTGAATGGAATCTT	8186	False	NA	NA	False	NA	NA	NA	32665792	32668646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
tx.11036	chr2	-	3568	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	-36	360	-36	-1	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATGGTGCCTGGGCCCA	5113	False	NA	NA	False	NA	NA	NA	32737293	32677973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
tx.11037	chr2	+	3668	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	45	1	45	-1	multi-exon	TRUE	canonical	3	292	junction_12	30.0169577319103	906	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTCATGTGCTGCTGG	8902	False	NA	NA	False	NA	NA	NA	32766170	32815265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
tx.11038	chr2	-	4064	26	FSM	ENSMUSG00000026792.17	ENSMUST00000113200.8	4030	26	-29	-5	-29	1	multi-exon	TRUE	canonical	3	22	junction_16	3.74165738677394	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTTGCATAGATTCTT	NA	False	NA	NA	False	NA	NA	NA	32851655	32815226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851573
tx.11039	chr2	-	4041	26	NIC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	3	junction_25	6.16389487256231	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTACACAGTTTGCAT	NA	False	NA	NA	False	NA	NA	NA	32851618	32815234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851551
tx.1104	chr1	-	600	5	ISM	ENSMUSG00000055067.16	ENSMUST00000111134.2	1229	6	23	10057	-13	-10057	5prime_fragment	FALSE	canonical	3	351	junction_3	38.1338104573881	232	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGAAGCTTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	179345583	179232845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
tx.11040	chr2	+	666	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	123	453	-38	0	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	529	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	5764	False	NA	NA	False	NA	NA	NA	32851693	32854055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
tx.11041	chr2	-	2090	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	26	-8	12	8	multi-exon	FALSE	canonical	3	167	junction_4	8.32666399786453	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAGCCAGAAGTCTTTT	3976	False	NA	NA	False	NA	NA	NA	32872068	32862993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
tx.11042	chr2	-	3435	29	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_28	24.7232642650271	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGCAACCCTTCTC	NA	False	NA	NA	False	NA	NA	NA	33020614	32876385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_33020435
tx.11043	chr2	-	3747	30	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-15	-30	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	18.462418040573	94	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATAATATAAATAAGCTT	NA	False	NA	NA	False	NA	NA	NA	33020635	32876265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
tx.11044	chr2	-	3355	28	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-29	-3892	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	18.5239251366749	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGACATCTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	33020649	32880277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
tx.11045	chr2	-	2251	13	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-28	-5812	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	11.9953694769644	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCTGTAGTTCCAACA	NA	False	NA	NA	False	NA	NA	NA	33020648	32915132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
tx.11046	chr2	-	6288	20	FSM	ENSMUSG00000038831.17	ENSMUST00000091039.5	2738	20	2	-3552	2	0	multi-exon	FALSE	canonical	2	6	junction_8	10.7559170084433	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTTCTATTTATTAG	NA	False	NA	NA	False	NA	NA	NA	33261488	33023432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
tx.11047	chr2	-	6089	18	FSM	ENSMUSG00000038831.17	ENSMUST00000131298.7	6035	18	-58	4	-1	0	multi-exon	FALSE	canonical	3	17	junction_6	7.39259893617541	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTTCTATTTATTAG	NA	False	NA	NA	False	NA	NA	NA	33261499	33023432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
tx.11048	chr2	-	5909	16	NIC	ENSMUSG00000038831.17	novel	6035	18	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	10.5164421529125	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATCGTTCTATTTATTA	NA	False	NA	NA	False	NA	NA	NA	33261503	33023433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
tx.11049	chr2	+	3455	5	FSM	ENSMUSG00000004105.9	ENSMUST00000004208.7	3339	5	-113	-3	-113	3	multi-exon	FALSE	canonical	1	1	junction_3	1.11803398874989	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACACTGTGTGCTGCTC	NA	False	NA	NA	False	NA	NA	NA	33105967	33137732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_33106466_33118186_33119045_33132211_33132406_33133690_33133962_33136098
tx.1105	chr1	-	2471	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	-22	0	-22	0	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTATATGTGTGT	7856	False	NA	NA	False	NA	NA	NA	179373854	179355619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
tx.11050	chr2	-	6494	2	FSM	ENSMUSG00000068966.11	ENSMUST00000134589.2	664	2	-20	-5810	-13	-1	multi-exon	FALSE	canonical	3	85	junction_1	0	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGTGGTCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	33321349	33296120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33302508_33321242
tx.11051	chr2	-	6613	3	FSM	ENSMUSG00000068966.11	ENSMUST00000113158.8	6602	3	-12	1	-12	-1	multi-exon	FALSE	canonical	3	36	junction_2	5	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGTGGTCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	33321348	33296120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33302508_33318112_33318233_33321242
tx.11052	chr2	-	4956	2	NIC	ENSMUSG00000026788.14	novel	4998	3	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTGTTGTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	33358566	33340301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_33345136_33358444
tx.11053	chr2	-	5108	4	FSM	ENSMUSG00000026788.14	ENSMUST00000113156.2	1828	4	-49	-3231	5	-4	multi-exon	FALSE	canonical	3	37	junction_1	10.6770782520313	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGTGTTGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	33358566	33340302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33345136_33352277_33352370_33354925_33354987_33358444
tx.11054	chr2	-	5029	3	FSM	ENSMUSG00000026788.14	ENSMUST00000028125.12	4998	3	-35	4	-8	-4	multi-exon	FALSE	canonical	3	44	junction_1	8.5	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGTGTTGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	33358579	33340302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33345136_33354925_33354987_33358444
tx.11055	chr2	-	5080	3	FSM	ENSMUSG00000026788.14	ENSMUST00000126442.2	487	3	4	-4597	4	-4	multi-exon	TRUE	canonical	3	37	junction_2	3.5	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGTGTTGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	33358567	33340302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33345136_33354925_33355050_33358444
tx.11056	chr2	-	4533	10	FSM	ENSMUSG00000038740.10	ENSMUST00000041555.10	4998	10	465	0	1	0	multi-exon	FALSE	canonical	3	7	junction_2	24.5990063033268	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGTTTGCTGTTATTT	4214	False	NA	NA	False	NA	NA	NA	33777493	33619964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33623544_33642320_33642381_33645001_33645058_33692756_33692852_33715059_33715183_33717693_33717824_33724548_33724646_33730170_33730279_33764349_33764473_33777331
tx.11057	chr2	-	589	3	FSM	ENSMUSG00000038740.10	ENSMUST00000146892.2	520	3	-66	-3	-66	3	multi-exon	FALSE	canonical	3	76	junction_1	8	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAAGTGTGTTTTGAT	4147	False	NA	NA	False	NA	NA	NA	33777560	33763622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33763860_33764349_33764473_33777331
tx.11058	chr2	-	1669	3	NNC	ENSMUSG00000087461.3	novel	2668	4	NA	NA	80962	-903	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	1	20	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTTTACCCTCAAGA	NA	False	NA	NA	False	NA	NA	NA	33916779	33909203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_33910509_33915810_33915970_33916574
tx.11059	chr2	-	3530	9	FSM	ENSMUSG00000038718.16	ENSMUST00000040638.15	2587	9	-677	-266	421	0	multi-exon	FALSE	canonical	3	23	junction_3	7.22733526273688	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATGTGTGTCTCTGT	155	False	NA	NA	False	NA	NA	NA	34262733	34061468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
tx.1106	chr1	+	4650	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	59	0	59	0	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGAGAATTTATTTG	NA	False	NA	NA	False	NA	NA	NA	179373993	179455043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
tx.11060	chr2	-	3424	8	FSM	ENSMUSG00000038718.16	ENSMUST00000113132.9	2734	8	-690	0	414	0	multi-exon	FALSE	canonical	3	6	junction_2	11.7577590534584	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATGTGTGTCTCTGT	148	False	NA	NA	False	NA	NA	NA	34262740	34061468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34062986_34065876_34065967_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
tx.11061	chr2	+	3113	12	NIC	ENSMUSG00000038696.15	novel	3018	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	61.6099433855197	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTTGTATATTGCTTT	NA	False	NA	NA	False	NA	NA	NA	34296785	34514960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_34296861_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
tx.11062	chr2	+	3104	11	FSM	ENSMUSG00000038696.15	ENSMUST00000124443.8	1630	11	0	-1474	0	0	multi-exon	FALSE	canonical	3	20	junction_1	60.6699266523374	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	34296873	34514961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_34297267_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
tx.11063	chr2	+	3013	10	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	57.8179347628996	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	34296874	34514961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_34297267_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
tx.11064	chr2	+	3325	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	63.4010252283037	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	NA	NA	NA	34296873	34514962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34471203_34471345_34487434_34487573_34509856_34509955_34513434
tx.11065	chr2	+	3432	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-321	0	0	0	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	34296873	34514961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
tx.11066	chr2	+	3589	13	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	73.4988662044071	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	NA	NA	NA	34296875	34514962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_34297267_34309119_34309278_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
tx.11067	chr2	-	2443	4	ISM	ENSMUSG00000026867.20	ENSMUST00000113101.8	2200	11	20027	-1299	-66	0	3prime_fragment	FALSE	canonical	3	220	junction_3	9.17726659862414	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTGCAGGGCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	34574371	34566195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193
tx.11068	chr2	-	6416	26	FSM	ENSMUSG00000026867.20	ENSMUST00000113099.10	5758	26	143	-801	-7	0	multi-exon	FALSE	canonical	2	81	junction_18	31.5772069695849	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTGCAGGGCTCTTTT	5923	False	NA	NA	False	NA	NA	NA	34644430	34566195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
tx.11069	chr2	-	6350	26	FSM	ENSMUSG00000026867.20	ENSMUST00000028224.15	5695	26	144	-799	-6	-2	multi-exon	FALSE	canonical	2	111	junction_18	27.1558465159899	170	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTTGCTGCAGGGCTCTT	5924	False	NA	NA	False	NA	NA	NA	34644429	34566197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
tx.1107	chr1	+	1926	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	19	3	19	-3	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTCCCCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	179495793	179514751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
tx.11070	chr2	+	2468	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	122	1082	-3	-66	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	3135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTGTGAAAAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	34662103	34666477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
tx.11071	chr2	+	2549	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-3	67	-3	-67	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	1418	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTGTGAAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	34662103	34666476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
tx.11072	chr2	-	1181	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	126	1661	-32	0	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2763	False	NA	NA	False	NA	NA	NA	34689798	34669228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
tx.11073	chr2	-	1473	8	FSM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	-22	-20	4	0	multi-exon	FALSE	canonical	3	85	junction_7	117.809081109381	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2799	False	NA	NA	False	NA	NA	NA	34689762	34669228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
tx.11074	chr2	-	1177	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-30	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	131.97928099609	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGACTTTTTACAAAAGT	2765	False	NA	NA	False	NA	NA	NA	34689796	34669227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675738_34680514_34680668_34685183_34685342_34687386_34687446_34689762
tx.11075	chr2	-	1148	7	ISM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	2292	-20	-2131	0	3prime_fragment	FALSE	canonical	3	358	junction_4	38.762811502206	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	5113	False	NA	NA	False	NA	NA	NA	34687448	34669228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386
tx.11076	chr2	-	1818	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	21	-1	1	0	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9217	False	NA	NA	False	NA	NA	NA	34716226	34695349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
tx.11077	chr2	-	1910	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	16	-3	1	0	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9217	False	NA	NA	False	NA	NA	NA	34716226	34695349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
tx.11078	chr2	-	2413	4	ISM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	22	5827	2	673	5prime_fragment	FALSE	canonical	3	82	junction_2	161.085898410341	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGTGACAGTGAAGCG	9218	False	NA	NA	False	NA	NA	NA	34716225	34701177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_34703022_34712569_34712988_34715973_34716083_34716183
tx.11079	chr2	-	2503	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	97	-670	1	670	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGCAGTGACAGTGAA	9217	False	NA	NA	False	NA	NA	NA	34716226	34701180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
tx.1108	chr1	-	3290	4	ISM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	49922	4	-178	-4	3prime_fragment	FALSE	canonical	3	310	junction_3	30.6412938514171	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACTGTCAAGTTAATA	NA	False	NA	NA	False	NA	NA	NA	179581323	179572462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875
tx.11080	chr2	-	1981	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	8	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	175.514974212571	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTATTCCGGCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34760949	34742105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753548_34755538_34755668_34755993_34756108_34756904_34757050_34760761
tx.11081	chr2	-	2012	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	23	2362	-6	6	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	574	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGGTATTCCGGCTGTG	NA	False	NA	NA	False	NA	NA	NA	34760951	34742107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
tx.11082	chr2	-	1861	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	3	104	junction_8	158.265945089271	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	NA	False	NA	NA	NA	34760949	34742111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34760761
tx.11083	chr2	-	3907	15	NNC	ENSMUSG00000026873.10	novel	3741	15	NA	NA	-1025	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	7.07863990164374	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTCCTTGGAGCTGGCT	2612	False	NA	NA	False	NA	NA	NA	34805063	34783763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801818_34804869
tx.11084	chr2	-	3936	15	FSM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	-195	0	-145	0	multi-exon	FALSE	canonical	3	18	junction_3	4.03871569806491	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGCGTGTCCTTGGAGC	3492	False	NA	NA	False	NA	NA	NA	34804183	34783768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
tx.11085	chr2	+	7599	44	FSM	ENSMUSG00000057110.16	ENSMUST00000028237.15	7615	44	15	1	15	-1	multi-exon	FALSE	canonical	3	34	junction_10	30.4342289721856	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGCAGGTTACCTTTATT	NA	False	NA	NA	False	NA	NA	NA	34999518	35068833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
tx.11086	chr2	+	5938	34	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	20.7397623189571	48	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGCAGGTTACCTTTATT	NA	False	NA	NA	False	NA	NA	NA	35022222	35068833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
tx.11087	chr2	-	2963	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	114	4	-24	-4	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	1602	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATAGTTGCATTATTT	9666	False	NA	NA	False	NA	NA	NA	35091018	35070220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
tx.11088	chr2	-	2985	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	450.926667402805	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACATAGTTGCATTATT	9695	False	NA	NA	False	NA	NA	NA	35090989	35070221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_35072460_35072528_35072581_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
tx.11089	chr2	+	2598	18	FSM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	16	-7	0	5	multi-exon	FALSE	canonical	3	7	junction_1	7.49855810822468	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTGTCTCACTGCTTT	NA	False	NA	NA	False	NA	NA	NA	35146407	35197909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_35146486_35156831_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
tx.1109	chr1	-	8491	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	1	14	1	-14	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGACAAGAGAAATACTGT	NA	False	NA	NA	False	NA	NA	NA	179631244	179572472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
tx.11090	chr2	+	2547	17	ISM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	10411	-5	10342	3	3prime_fragment	FALSE	canonical	3	17	junction_1	5.90517516674992	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGGTGTCTCACTGCT	5202	False	NA	NA	False	NA	NA	NA	35156802	35197907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
tx.11091	chr2	-	2831	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	-43	-1	-43	1	multi-exon	FALSE	canonical	3	37	junction_2	5.5876848714134	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGAGTCTTGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	35227031	35203996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
tx.11092	chr2	-	3353	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	37	-1	combination_of_known_junctions	TRUE	canonical	3	18	junction_3	32.273139846559	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGTCTGGTATGGATT	1202	False	NA	NA	False	NA	NA	NA	35335808	35290191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35335707
tx.11093	chr2	-	3414	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	-26	3	-26	1	multi-exon	FALSE	canonical	3	26	junction_7	27.2381784880513	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	NA	False	NA	NA	NA	35351304	35290193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
tx.11094	chr2	-	3542	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	662	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	27.6708053621096	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	NA	False	NA	NA	NA	35352581	35290192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35352356
tx.11095	chr2	-	3813	9	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	427	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	26.4548554144603	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	NA	False	NA	NA	NA	35352816	35290192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35352356
tx.11096	chr2	+	6473	16	ISM	ENSMUSG00000026883.18	ENSMUST00000135741.8	4128	17	-51	1	-51	-1	intron_retention	FALSE	canonical	3	33	junction_1	66.8343225196954	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGACTTGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	35472800	35621003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_35473062_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
tx.11097	chr2	+	6300	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11372	0	intron_retention	FALSE	canonical	3	14	junction_1	70.1929404490857	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	4414	False	NA	NA	False	NA	NA	NA	35500620	35621006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_35500706_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
tx.11098	chr2	+	6500	16	FSM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	-38	-7	18	0	multi-exon	FALSE	canonical	3	22	junction_1	68.7589670919769	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	8484	False	NA	NA	False	NA	NA	NA	35512010	35621006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
tx.11099	chr2	+	5531	17	NIC	ENSMUSG00000026883.18	novel	6455	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	76.7872212269073	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	8471	False	NA	NA	False	NA	NA	NA	35511997	35621006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
tx.111	chr1	-	6852	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-5	443	combination_of_known_splicesites	FALSE	canonical	3	25	junction_14	39.454766143377	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	NA	False	NA	NA	NA	30912980	30842183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30912658
tx.1110	chr1	+	6692	36	FSM	ENSMUSG00000026490.19	ENSMUST00000097450.10	5160	36	-1113	-419	-475	-3	multi-exon	FALSE	canonical	3	39	junction_2	13.9494714990225	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTGTTTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	179787561	179990150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
tx.11100	chr2	+	6235	14	NIC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-48	0	intron_retention	FALSE	canonical	3	43	junction_9	57.3698681813714	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	35551313	35621006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
tx.11101	chr2	+	6286	14	ISM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	39280	-7	-33	0	3prime_fragment	FALSE	canonical	3	179	junction_9	30.3936695370762	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	35551328	35621006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
tx.11102	chr2	+	5350	15	ISM	ENSMUSG00000026883.18	ENSMUST00000112986.9	5580	17	103005	0	-79	0	3prime_fragment	FALSE	canonical	3	47	junction_14	55.3541934698165	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	35551282	35621006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
tx.11103	chr2	-	791	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	70	0	70	0	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	338	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	False	NA	NA	False	NA	NA	NA	35939348	35926337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
tx.11104	chr2	-	2521	4	ISM	ENSMUSG00000026890.20	ENSMUST00000112961.10	3292	9	12615	7	2828	-6	3prime_fragment	FALSE	canonical	1	1	junction_2	6.37704215656966	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAGAATGCCATGGAA	NA	False	NA	NA	False	NA	NA	NA	35981457	35971971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331
tx.11105	chr2	-	2412	3	ISM	ENSMUSG00000026890.20	ENSMUST00000136821.9	825	5	2840	-1731	2840	0	3prime_fragment	FALSE	canonical	3	7	junction_1	4	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCATGGAATTCCATT	NA	False	NA	NA	False	NA	NA	NA	35981445	35971964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_35974088_35980973_35981149_35981331
tx.11106	chr2	-	2457	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	160	0	2	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	NA	False	NA	NA	NA	36026625	36006090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
tx.11107	chr2	+	1318	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	248	1057	3	-1057	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGATAGAGTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	36026648	36079602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
tx.11108	chr2	-	3122	4	FSM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	447	-513	383	-1	multi-exon	FALSE	canonical	2	7	junction_3	79.6366749682582	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTGTATATTAGATATT	NA	False	NA	NA	False	NA	NA	NA	37248818	37240086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37248363
tx.11109	chr2	-	2808	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	49	1	-30	-1	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTGTATATTAGATATT	NA	False	NA	NA	False	NA	NA	NA	37249295	37240086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
tx.1111	chr1	+	6856	37	NIC	ENSMUSG00000026490.19	novel	9161	37	NA	NA	-478	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	17.1587540196301	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	179787558	179990153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_179788853_179826926_179827019_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
tx.11110	chr2	-	9057	22	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-90	0	intron_retention	FALSE	canonical	0	0	junction_20	11.6766720944717	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTCTTAGTGTCAAT	NA	False	NA	NA	False	NA	NA	NA	37313005	37260080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
tx.11111	chr2	-	4697	2	FSM	ENSMUSG00000066798.4	ENSMUST00000053098.6	4535	2	-165	3	-165	0	multi-exon	FALSE	canonical	3	19	junction_1	0	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGGGCTTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	37321096	37315514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_37319936_37320820
tx.11112	chr2	-	5316	2	FSM	ENSMUSG00000050714.10	ENSMUST00000067043.5	5267	2	-49	0	-35	0	multi-exon	FALSE	canonical	3	22	junction_1	0	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTGTCATTGACTTC	NA	False	NA	NA	False	NA	NA	NA	37333182	37322179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_37327012_37332698
tx.11113	chr2	+	4965	26	FSM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	1	1	1	-1	multi-exon	FALSE	canonical	3	116	junction_1	34.3579743291132	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	1546	False	NA	NA	False	NA	NA	NA	37333297	37456448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
tx.11114	chr2	+	4715	26	NIC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	48.8404094986928	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	NA	False	NA	NA	False	NA	NA	NA	37342253	37456448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_37342314_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
tx.11115	chr2	+	4852	26	FSM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	-23	18	-1	-1	multi-exon	FALSE	canonical	3	120	junction_1	33.7498088883478	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	NA	False	NA	NA	False	NA	NA	NA	37342255	37456448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
tx.11116	chr2	-	3232	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-88	0	-15	0	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	851	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTTCTTGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	37593375	37473167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
tx.11117	chr2	-	3272	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTTCTTGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	37593890	37473167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
tx.11118	chr2	-	191	2	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GATTAAAGAATCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37610225	37560453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_-_37560623_37610203
tx.11119	chr2	-	4350	22	FSM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	-10	2	5	-2	multi-exon	FALSE	canonical	3	52	junction_2	9.9979589753844	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACCGTTTAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	38177397	37689004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
tx.11120	chr2	-	4476	23	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	20.1983961395842	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTGACCGTTTAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	38177395	37689005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_37691263_37692026_37692286_37695083_37695213_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
tx.11121	chr2	+	2527	5	FSM	ENSMUSG00000000247.12	ENSMUST00000000253.6	2840	5	315	-2	315	2	multi-exon	FALSE	canonical	0	0	junction_2	2.73861278752583	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGCTGGTACTATCTA	NA	False	NA	NA	False	NA	NA	NA	38241085	38259747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_38241906_38243322_38243526_38244460_38244865_38249909_38250116_38258853
tx.11122	chr2	+	2275	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	46	8017	21	823	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	288	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATTTTGTTCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	38401700	38476601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
tx.11123	chr2	-	994	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	162	4	-5	-4	multi-exon	FALSE	canonical	3	1531	junction_5	118.933011500129	506	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGAGTGGTTGTAATG	2375	False	NA	NA	False	NA	NA	NA	38533937	38478051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
tx.11124	chr2	-	6141	11	FSM	ENSMUSG00000063972.14	ENSMUST00000076275.11	5941	11	-200	0	-142	0	multi-exon	FALSE	canonical	3	61	junction_5	17.3677862722916	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATCTGTCTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	38816429	38613385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
tx.11125	chr2	-	447	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	498	1	-4	-1	multi-exon	FALSE	canonical	3	27807	junction_3	5721.16085733967	2575	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	NA	False	NA	NA	NA	38895138	38891592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
tx.11126	chr2	+	1316	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	410	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTGAGGCTTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	38898105	38905884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_38898359_38903128_38903200_38903734_38903912_38905069
tx.11127	chr2	-	4534	23	FSM	ENSMUSG00000026754.17	ENSMUST00000039165.15	4869	23	-13	348	-13	0	multi-exon	FALSE	canonical	3	9	junction_22	11.0304799353113	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	NA	NA	NA	38955566	38906514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
tx.11128	chr2	-	4485	23	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-8	0	intron_retention	FALSE	canonical	3	23	junction_1	8.80974291610907	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	NA	NA	NA	38955561	38906514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
tx.11129	chr2	-	3996	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	102	17	-29	-17	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	616	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTGTGAAAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	39116361	39084382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
tx.1113	chr1	-	2616	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	34	1376	-5	405	multi-exon	FALSE	canonical	3	14	junction_5	4.06390281902126	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTATGCGTTCCGTGAA	3899	False	NA	NA	False	NA	NA	NA	180023551	179994178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
tx.11130	chr2	+	445	2	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	84	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAGATAGAGCATGAAGA	NA	False	NA	NA	False	NA	NA	NA	43085690	43086577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_43085874_43086315
tx.11131	chr2	-	2429	10	ISM	ENSMUSG00000036890.14	ENSMUST00000112810.8	2564	11	1294	0	1294	0	3prime_fragment	TRUE	canonical	3	41	junction_7	7.69960717292018	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGCGTCTAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	44750340	44454423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302
tx.11132	chr2	-	2545	11	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_10	9.30644937664198	50	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCATTTGCGTCTAAGT	NA	False	NA	NA	False	NA	NA	NA	44817274	44454426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817153
tx.11133	chr2	+	5650	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	33	3	33	-3	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCACATGCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	48704153	48793278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
tx.11134	chr2	-	4004	14	FSM	ENSMUSG00000026761.13	ENSMUST00000154784.8	1477	14	-39	-2488	6	-4	multi-exon	FALSE	canonical	3	68	junction_4	114.388107132055	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATCTGATGAAGCATT	NA	False	NA	NA	False	NA	NA	NA	48839282	48792839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
tx.11135	chr2	-	4330	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	219	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	164.079015932531	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTGTTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	48839243	48792616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48811725_48811816_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
tx.11136	chr2	-	2463	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-8	571	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	129.063587902329	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTACCTCATAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	48839261	48794320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48827463_48827541_48830344_48830413_48839128
tx.11137	chr2	-	3975	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	120.796175338176	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAATATCTGATGAAGC	NA	False	NA	NA	False	NA	NA	NA	48839253	48792842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
tx.11138	chr2	-	2545	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	36	1485	1	571	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTACCTCATAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	48839252	48794320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
tx.11139	chr2	+	5017	11	NIC	ENSMUSG00000036792.13	novel	713	8	NA	NA	34	-1597	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.49857113690718	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGAATTTTTTATCAT	6260	False	NA	NA	False	NA	NA	NA	48839568	49148973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_48840188_48908265_48908338_48976601_48976665_48989728_48989822_49008663_49008818_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
tx.1114	chr1	-	2006	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	-9	0	-9	0	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGTTTGGCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	180083874	180054568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
tx.11140	chr2	+	6873	26	FSM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	-17	0	-17	0	multi-exon	TRUE	canonical	3	10	junction_25	6.95056832208705	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGGTGTCCTTATTT	NA	False	NA	NA	False	NA	NA	NA	49509292	49664790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_49509800_49561763_49561855_49570176_49570251_49578664_49578770_49583705_49583755_49584011_49584068_49584779_49584868_49587991_49588117_49590512_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
tx.11141	chr2	+	5916	18	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	81065	0	-216	0	3prime_fragment	FALSE	canonical	3	10	junction_17	7.40616034613513	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGGTGTCCTTATTT	NA	False	NA	NA	False	NA	NA	NA	49590374	49664790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
tx.11142	chr2	+	3487	5	FSM	ENSMUSG00000050447.16	ENSMUST00000112712.10	3495	5	-1	9	-1	-3	multi-exon	FALSE	canonical	1	1	junction_4	1.73205080756888	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCGGCTTCTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	49956439	50083572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_49956597_50055480_50055670_50063612_50063712_50078722_50078854_50080661
tx.11143	chr2	-	1653	7	ISM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	22	0	0	0	intron_retention	FALSE	canonical	3	533	junction_6	61.03664655125	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	NA	False	NA	NA	NA	50186707	50169892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263
tx.11144	chr2	-	1329	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	11	2	11	-2	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	50186718	50169894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
tx.11145	chr2	-	1283	8	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	58	junction_6	203.005881085012	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	50186727	50169894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182911_50186263_50186322_50186654
tx.11146	chr2	-	2824	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	4	0	3	0	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	1049	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGATGTTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	51039119	51020449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
tx.11147	chr2	-	2105	5	NNC	ENSMUSG00000036249.17	novel	2057	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.0455931256497	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGCTGCATCATTATT	NA	False	NA	NA	False	NA	NA	NA	51825174	51814459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824950
tx.11148	chr2	-	2167	5	NNC	ENSMUSG00000036249.17	novel	1975	5	NA	NA	166	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	12.1937483982572	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGTGAGCTGCATCAT	NA	False	NA	NA	False	NA	NA	NA	51824853	51814463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824563
tx.11149	chr2	+	8486	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	153	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	51962843	52012393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
tx.1115	chr1	-	1919	10	ISM	ENSMUSG00000010609.16	ENSMUST00000010753.14	2004	11	190	1	-3	-1	3prime_fragment	FALSE	canonical	3	22	junction_9	5.45690184791497	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTGGTGTTTGGCCCC	NA	False	NA	NA	False	NA	NA	NA	180073325	180054571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178
tx.11150	chr2	+	8407	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	144.087250696058	72	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	NA	False	NA	NA	NA	51962843	52012392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
tx.11151	chr2	+	8777	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-21	0	intron_retention	TRUE	canonical	0	0	junction_15	126.478033296594	66	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	51962822	52012393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
tx.11152	chr2	+	8664	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_15	139.06799837718	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	51962857	52012393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
tx.11153	chr2	+	4102	6	FSM	ENSMUSG00000036202.17	ENSMUST00000152178.2	2784	6	-1314	-4	-165	2	multi-exon	FALSE	canonical	3	196	junction_2	215.141441846986	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTAGTGCCTGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	52000830	52012397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
tx.11154	chr2	+	4160	7	ISM	ENSMUSG00000036202.17	ENSMUST00000112693.10	8509	36	38003	2	-149	0	3prime_fragment	FALSE	canonical	3	521	junction_3	89.7100266909384	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	52000846	52012393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
tx.11155	chr2	-	5086	5	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	166.191719107782	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATTCTTGGGGGTTTT	4758	False	NA	NA	False	NA	NA	NA	52314910	52287964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_52292445_52294917_52295070_52302073_52302158_52306647_52306709_52314601
tx.11156	chr2	-	5232	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	5	2	5	-2	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	491	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATTCTTGGGGGTTTT	4760	False	NA	NA	False	NA	NA	NA	52314908	52287964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
tx.11157	chr2	-	4182	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-2	537	-2	-537	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAAATGTGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	52632214	52582212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
tx.11158	chr2	-	5242	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-3	1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	451	2	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACTCTATTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	53081240	53026856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
tx.11159	chr2	-	5141	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	1392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	298	2	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTACTCTATTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	53081266	53026857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
tx.1116	chr1	+	3874	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-2	1	-2	1	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	3226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3145	False	NA	NA	False	NA	NA	NA	180396491	180428818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
tx.11160	chr2	+	2250	4	FSM	ENSMUSG00000026960.7	ENSMUST00000155517.2	582	4	19	-1687	19	1	multi-exon	FALSE	canonical	3	23	junction_1	228.30583776057	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTAATGGCAAGGT	NA	False	NA	NA	False	NA	NA	NA	53081756	53109233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_53081893_53084295_53084350_53092930_53093064_53107306
tx.11161	chr2	+	2551	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-4	1	-4	-1	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	536	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGTGTAATGGCAAG	NA	False	NA	NA	False	NA	NA	NA	53082095	53109231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
tx.11162	chr2	+	5772	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	-27	0	16	0	multi-exon	TRUE	canonical	3	41	junction_1	44.6148447828747	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTGGCATTTTGA	NA	False	NA	NA	False	NA	NA	NA	57127662	57260731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
tx.11163	chr2	+	5573	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	47	0	47	0	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	280	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTGGCATTTTGA	NA	False	NA	NA	False	NA	NA	NA	57128440	57260731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
tx.11164	chr2	+	5328	15	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	51463	-4	22468	4	3prime_fragment	FALSE	canonical	3	160	junction_4	27.3160825768802	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGCATTTTGATGTT	NA	False	NA	NA	False	NA	NA	NA	57179856	57260735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
tx.11165	chr2	-	3524	12	FSM	ENSMUSG00000026836.16	ENSMUST00000112601.9	3050	12	-471	-3	-142	3	multi-exon	FALSE	canonical	3	10	junction_10	14.1281034036818	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	58457311	58336449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58406035_58406313_58427789_58427886_58456798
tx.11166	chr2	-	3280	11	FSM	ENSMUSG00000026836.16	ENSMUST00000056376.12	2394	11	-175	-711	-175	3	multi-exon	FALSE	canonical	3	23	junction_9	11.677328461596	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	58457344	58336449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58427789_58427886_58456798
tx.11167	chr2	+	4459	21	FSM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	26	-1	-5	0	multi-exon	FALSE	canonical	0	0	junction_9	23.7412615503052	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	NA	False	NA	NA	NA	58991219	59185549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
tx.11168	chr2	+	3732	16	ISM	ENSMUSG00000026991.21	ENSMUST00000112577.8	4222	21	78255	2	-14612	-1	3prime_fragment	FALSE	canonical	0	0	junction_3	23.4789740453501	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	NA	False	NA	NA	NA	59138347	59185547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
tx.11169	chr2	+	7464	27	FSM	ENSMUSG00000035168.17	ENSMUST00000037526.11	7873	27	-23	432	-21	0	multi-exon	TRUE	canonical	3	10	junction_9	32.9830734785992	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	NA	False	NA	NA	NA	59442364	59676061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
tx.1117	chr1	+	3059	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	31.7940595429747	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	NA	False	NA	NA	NA	180468891	180518252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_180468963_180469481_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
tx.11170	chr2	+	7422	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	18.3464360565297	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	NA	False	NA	NA	NA	59442385	59676061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
tx.11171	chr2	+	6740	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3665	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.7370385306165	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	7809	False	NA	NA	False	NA	NA	NA	59606389	59676059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_59606661_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
tx.11172	chr2	+	4993	14	ISM	ENSMUSG00000035168.17	ENSMUST00000139863.3	7246	26	153039	0	-6218	0	3prime_fragment	FALSE	canonical	3	128	junction_7	15.3853845961548	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	123	False	NA	NA	False	NA	NA	NA	59630193	59676061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
tx.11173	chr2	-	2068	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	18.5580171354593	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	59712921	59682707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
tx.11174	chr2	-	2018	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	14.3488675511345	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	59712948	59682707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
tx.11175	chr2	-	1159	2	FSM	ENSMUSG00000026987.17	ENSMUST00000138089.2	509	2	-650	0	-8	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTAATTGACTTCTGC	9142	False	NA	NA	False	NA	NA	NA	60040153	60036936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_60037308_60039365
tx.11176	chr2	-	510	2	FSM	ENSMUSG00000026987.17	ENSMUST00000134908.2	406	2	-103	-1	-12	0	multi-exon	FALSE	canonical	3	22	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTAATTGACTTCTGC	9100	False	NA	NA	False	NA	NA	NA	60040195	60036936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_60037308_60040056
tx.11177	chr2	+	3574	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	20	0	-6	0	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	673	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAACTTTTTCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	60040250	60079555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
tx.11178	chr2	+	3666	11	FSM	ENSMUSG00000026977.18	ENSMUST00000102747.8	2271	11	-162	-1233	-2	-5	multi-exon	FALSE	canonical	3	14	junction_1	141.271405457722	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGAACTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	60040254	60079550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
tx.11179	chr2	+	3978	3	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	16367	-1326	-1933	72	3prime_fragment	FALSE	canonical	3	332	junction_2	19.5	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCATACAATGGTTCTA	NA	False	NA	NA	False	NA	NA	NA	60071479	60079627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_60074015_60075555_60075605_60078233
tx.1118	chr1	+	3110	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	32.1742478112888	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	NA	False	NA	NA	NA	180468907	180518252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
tx.11180	chr2	-	1016	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	338	0	268	0	multi-exon	FALSE	canonical	3	68	junction_2	6.41872261435249	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	4270	False	NA	NA	False	NA	NA	NA	60114494	60082336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
tx.11181	chr2	-	6892	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-62	-1658	10	1	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	960	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCTCCTTGGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	60213637	60122445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
tx.11182	chr2	+	735	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	-174	5	-174	-5	multi-exon	FALSE	canonical	3	174	junction_2	3	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTGTGGTGGTATACC	9172	False	NA	NA	False	NA	NA	NA	60241694	60242918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_60242062_60242190_60242353_60242712
tx.11183	chr2	-	2316	15	FSM	ENSMUSG00000026970.17	ENSMUST00000164147.8	2543	15	-25	252	7	-252	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGTAGGTGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	60711807	60582548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
tx.11184	chr2	-	2260	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	12	-255	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAGTAGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	60711802	60582551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
tx.11185	chr2	-	2561	13	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	7	63	intron_retention	FALSE	canonical	3	198	junction_4	41.8286850007132	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAGAAAACTTCAAT	NA	False	NA	NA	False	NA	NA	NA	60711807	60583002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
tx.11186	chr2	+	1993	8	NIC	ENSMUSG00000064289.16	novel	2227	9	NA	NA	-7	25	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	16.9741700527476	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTTTGTTTCTGAGAT	NA	False	NA	NA	False	NA	NA	NA	61423413	61484459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_61423553_61443994_61444143_61457246_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
tx.11187	chr2	+	2043	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	-8	4	-8	-4	multi-exon	FALSE	canonical	3	34	junction_2	9.53190132434987	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCATGTCTGATGGGA	NA	False	NA	NA	False	NA	NA	NA	61423412	61484511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
tx.11188	chr2	+	1491	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	50	0	2	0	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	1129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8597	False	NA	NA	False	NA	NA	NA	61542087	61630720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
tx.11189	chr2	-	1897	9	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	55435	1563	911	-1563	3prime_fragment	FALSE	canonical	3	241	junction_6	20.4110111214511	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTAATGGGTTATGTC	NA	False	NA	NA	False	NA	NA	NA	62187140	62161979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959
tx.1119	chr1	+	2968	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	192	0	8	0	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	NA	False	NA	NA	NA	180468906	180518252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
tx.11190	chr2	-	3449	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	257	1562	47	-1562	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	303	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAATGGGTTATGTCT	NA	False	NA	NA	False	NA	NA	NA	62242318	62161978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
tx.11191	chr2	+	3199	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	8	123	8	-123	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	431	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTTTTAAATGTTCT	NA	False	NA	NA	False	NA	NA	NA	62494636	62524330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
tx.11192	chr2	+	2569	7	FSM	ENSMUSG00000044647.17	ENSMUST00000122912.8	10672	7	41	8062	-34	0	multi-exon	FALSE	canonical	1	2	junction_1	4.6696419087073	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTATTTTATTTATG	5644	False	NA	NA	False	NA	NA	NA	65676151	65853828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_65676229_65690874_65691037_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
tx.11193	chr2	-	2985	11	FSM	ENSMUSG00000026994.10	ENSMUST00000028378.4	3885	11	233	667	233	653	multi-exon	FALSE	canonical	1	2	junction_3	1.86815416922694	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTTCTTTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	65955105	65913776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_65914637_65915580_65915734_65921238_65921341_65921505_65921638_65923874_65924076_65925544_65925663_65926133_65926369_65928056_65928207_65932788_65932962_65937193_65937817_65954867
tx.11194	chr2	-	4478	29	FSM	ENSMUSG00000034848.18	ENSMUST00000102718.10	4470	29	-9	1	-9	-1	multi-exon	TRUE	canonical	1	2	junction_7	6.12653562590721	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTTTATATTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	66086970	66014671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_66015188_66016497_66016566_66018603_66018725_66021902_66022128_66028011_66028208_66031466_66031629_66031816_66031968_66037795_66037878_66038997_66039109_66040335_66040525_66047528_66047636_66052997_66053137_66053858_66053970_66054419_66054493_66056249_66056489_66057074_66057297_66059325_66059484_66061632_66061763_66065386_66065588_66065916_66066015_66066564_66066758_66068130_66068230_66069866_66069952_66072974_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
tx.11195	chr2	-	1697	6	ISM	ENSMUSG00000034848.18	ENSMUST00000125446.3	4061	28	-33	57092	-8	-10619	5prime_fragment	FALSE	canonical	2	9	junction_3	7.79743547584717	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTAATAGCATCATT	NA	False	NA	NA	False	NA	NA	NA	66086969	66072078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
tx.11196	chr2	-	3288	18	FSM	ENSMUSG00000027030.16	ENSMUST00000102715.4	3536	18	246	2	-82	1	multi-exon	FALSE	canonical	3	28	junction_11	9.06874933675377	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCGAGTCTCCTCCATTT	NA	False	NA	NA	False	NA	NA	NA	68302366	68040790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
tx.11197	chr2	+	6812	11	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	18.4759302878096	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	68691802	68944626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943365_68943572
tx.11198	chr2	+	2889	10	FSM	ENSMUSG00000027035.11	ENSMUST00000028426.9	7038	10	11	4138	2	1500	multi-exon	FALSE	canonical	3	48	junction_8	6.54896090146283	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAAGCCTGTGAGTTAA	NA	False	NA	NA	False	NA	NA	NA	68691795	68940488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785
tx.11199	chr2	+	6913	11	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	canonical	3	48	junction_8	6.39140047250992	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	68691805	68944626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943469_68943572
tx.112	chr1	-	7028	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	443	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	40.3277682111084	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	NA	False	NA	NA	NA	30912979	30842183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902245_30912658
tx.1120	chr1	+	3448	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	-14	37	-14	-37	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	356	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCGATGTTTCTGTTAA	NA	False	NA	NA	False	NA	NA	NA	180553593	180581732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
tx.11200	chr2	+	2971	2	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	151192	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATGAGTGTCCTTTAT	812	False	NA	NA	False	NA	NA	NA	68941446	68944625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_68943365_68943572
tx.11201	chr2	+	4526	2	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	149742	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	462	False	NA	NA	False	NA	NA	NA	68939996	68944626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_68943469_68943572
tx.11202	chr2	-	4503	7	FSM	ENSMUSG00000005233.17	ENSMUST00000112320.8	1527	7	-20	-2956	2	2956	multi-exon	FALSE	canonical	3	49	junction_6	307.891214554751	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTTTCCCAACTTGAAA	NA	False	NA	NA	False	NA	NA	NA	69036499	69021282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
tx.11203	chr2	-	1352	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	0	0	0	0	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	451	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	69036538	69024238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
tx.11204	chr2	+	1446	12	FSM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	22	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	9.81144550053239	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTTTGAAAGTATTA	NA	False	NA	NA	False	NA	NA	NA	69477573	69497915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69484589_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
tx.11205	chr2	-	4797	13	NIC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_11	60.9445900433792	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGCCCACCATATATAT	7073	False	NA	NA	False	NA	NA	NA	69543842	69517155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
tx.11206	chr2	-	3767	14	FSM	ENSMUSG00000027086.17	ENSMUST00000073152.13	2865	14	-902	0	8	0	multi-exon	FALSE	canonical	0	0	junction_12	59.5439273976854	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGGCCCACCATATA	7063	False	NA	NA	False	NA	NA	NA	69543852	69517158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
tx.11207	chr2	+	3839	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	12	2276	12	2188	multi-exon	TRUE	canonical	3	282	junction_1	41.7748260879032	380	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTCATTTGAGAAATA	NA	False	NA	NA	False	NA	NA	NA	69553160	69582080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
tx.11208	chr2	+	3915	15	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-23	2188	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	118.295461986209	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTCATTTGAGAAATA	NA	False	NA	NA	False	NA	NA	NA	69553174	69582080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
tx.11209	chr2	+	4002	14	FSM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	-47	2290	-47	2174	multi-exon	FALSE	canonical	3	35	junction_1	98.4826299525295	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAAACACAAAACCTGCC	NA	False	NA	NA	False	NA	NA	NA	69553389	69582066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
tx.1121	chr1	-	1043	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	64	1734	-21	131	multi-exon	TRUE	canonical	3	2337	junction_3	156.5907617539	816	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTCTGGTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	180641133	180630130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
tx.11210	chr2	+	2984	15	NIC	ENSMUSG00000042133.17	novel	6245	14	NA	NA	-46	1067	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	126.877813631213	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGTAATACTGTG	NA	False	NA	NA	False	NA	NA	NA	69553390	69580959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_69553708_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
tx.11211	chr2	+	4274	3	NIC	ENSMUSG00000027088.11	novel	2260	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	101	junction_2	2.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	69619980	69627567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_69620301_69620629_69622836_69625819
tx.11212	chr2	+	2242	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	18	0	4	0	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	69619997	69627567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
tx.11213	chr2	+	2181	4	FSM	ENSMUSG00000027088.11	ENSMUST00000112266.8	2194	4	13	0	3	0	multi-exon	FALSE	canonical	3	18	junction_1	37.7918274528002	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	69620006	69627567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_69620249_69620629_69620666_69622680_69622836_69625819
tx.11214	chr2	+	4028	4	NNC	ENSMUSG00000042155.4	novel	839	2	NA	NA	362	-573	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1.63299316185545	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTAATTGTAGGCTAT	5834	False	NA	NA	False	NA	NA	NA	69653075	69666422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_69653333_69654130_69655345_69659189_69659343_69664018
tx.11215	chr2	+	4812	3	ISM	ENSMUSG00000042155.4	ENSMUST00000053087.4	4617	4	367	582	367	-582	3prime_fragment	FALSE	canonical	3	9	junction_1	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCTGTAACTTTAATT	5839	False	NA	NA	False	NA	NA	NA	69653080	69666413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_69655345_69659189_69659343_69664018
tx.11216	chr2	+	1686	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	39	276	-22	0	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	1161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	69691944	69701854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
tx.11217	chr2	+	3520	11	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	1543	junction_6	112.445586840925	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATATTTCTCACTTTGG	NA	False	NA	NA	False	NA	NA	NA	69691952	69702185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
tx.11218	chr2	+	3276	10	NIC	ENSMUSG00000068882.14	novel	1563	11	NA	NA	-29	0	intron_retention	FALSE	canonical	3	1543	junction_5	118.399616282328	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	69691937	69701854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
tx.11219	chr2	+	5611	10	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	378	3	intron_retention	FALSE	canonical	3	1543	junction_5	118.435897127497	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTTCTTTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	69692407	69701857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
tx.1122	chr1	+	3245	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	-36	4	-36	-4	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	974	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTTTTGGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	180678655	180695674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
tx.11220	chr2	-	959	7	FSM	ENSMUSG00000051730.16	ENSMUST00000060447.13	968	7	9	0	-2	0	multi-exon	FALSE	canonical	3	432	junction_3	75.5058864519111	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCATTTTCTCTTTTCTT	6815	False	NA	NA	False	NA	NA	NA	69715950	69701541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
tx.11221	chr2	-	861	6	FSM	ENSMUSG00000051730.16	ENSMUST00000142127.8	851	6	-7	-3	0	3	multi-exon	FALSE	canonical	3	48	junction_3	209.013492387453	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGTCTCTAGCACCAT	6817	False	NA	NA	False	NA	NA	NA	69715948	69701554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
tx.11222	chr2	-	902	3	ISM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	3	2767	3	-2767	5prime_fragment	FALSE	canonical	3	609	junction_2	8.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGGATTTTTCCTTG	6820	False	NA	NA	False	NA	NA	NA	69715945	69710858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_69711293_69711640_69711756_69715592
tx.11223	chr2	+	8150	39	NNC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	-63	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	29.3752114390929	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGAATGTTTATGTT	4263	False	NA	NA	False	NA	NA	NA	69727526	69854354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784719_69786315_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
tx.11224	chr2	+	1915	2	FSM	ENSMUSG00000075304.3	ENSMUST00000100043.3	2100	2	184	1	184	-1	multi-exon	FALSE	canonical	3	75	junction_1	0	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTCTCCTCTGATCTT	NA	False	NA	NA	False	NA	NA	NA	70305450	70308072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_70305661_70306367
tx.11225	chr2	+	2225	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	-5	18	-5	0	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	888	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	NA	False	NA	NA	NA	70491914	70522069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
tx.11226	chr2	+	1245	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	-49	0	-35	0	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGCCTCCCGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	70491884	70519704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
tx.11227	chr2	-	4227	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-55	0	combination_of_known_splicesites	TRUE	canonical	3	10	junction_1	60.4301709045701	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	NA	NA	NA	70656127	70542750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_70544510_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
tx.11228	chr2	-	4408	21	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_18	66.7850844126142	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	NA	NA	NA	70656131	70542750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
tx.11229	chr2	-	4343	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-66	3	-66	-3	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	368	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACTGTGAAAATTACAC	NA	False	NA	NA	False	NA	NA	NA	70656138	70542753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
tx.1123	chr1	+	2471	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	2	0	2	0	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	2216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGAGCGAGTCATCGA	NA	False	NA	NA	False	NA	NA	NA	180720674	180726668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
tx.11230	chr2	-	2113	10	NIC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	29.4505234814822	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	70885924	70794907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812312_70823827_70823920_70848563_70848719_70885714
tx.11231	chr2	-	2342	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	2	3	2	-3	multi-exon	FALSE	canonical	3	72	junction_7	14.8332292963476	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	70885925	70794907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
tx.11232	chr2	+	1921	15	FSM	ENSMUSG00000041966.19	ENSMUST00000064141.12	1905	15	-17	1	6	-1	multi-exon	FALSE	canonical	3	15	junction_14	54.6553207074357	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGGCTTTATGACTATC	NA	False	NA	NA	False	NA	NA	NA	70886107	70929485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70929358
tx.11233	chr2	+	4599	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	6	3134	6	2446	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGACTGAAGAACTCAGG	NA	False	NA	NA	False	NA	NA	NA	70886093	70923068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
tx.11234	chr2	+	3467	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	52.7831528471898	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGTGTGTGTATACAT	NA	False	NA	NA	False	NA	NA	NA	70886091	70926198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924541
tx.11235	chr2	+	2505	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	-32	-7	-15	0	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTTCACTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	71042069	71093642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
tx.11236	chr2	+	2483	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	143	5	5	0	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	425	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTTCACTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	71042320	71093642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
tx.11237	chr2	-	2868	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	420	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_15	34.4382940017359	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	71164438	71104613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164384
tx.11238	chr2	-	2764	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5256	418	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_15	22.4311291636323	43	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCATGGAGTTGGTTTCC	NA	False	NA	NA	False	NA	NA	NA	71164440	71104615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
tx.11239	chr2	-	2991	18	FSM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	151	3209	-65	418	multi-exon	FALSE	canonical	3	27	junction_16	36.6501273382513	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCATGGAGTTGGTTTCC	NA	False	NA	NA	False	NA	NA	NA	71197942	71104615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856
tx.1124	chr1	+	1579	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	1	0	1	0	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	1030	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	17	False	NA	NA	False	NA	NA	NA	180731858	180735653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
tx.11240	chr2	+	1485	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-16	107	-16	-107	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	1424	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCCCACTGCTTTCTT	5102	False	NA	NA	False	NA	NA	NA	71219587	71271859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
tx.11241	chr2	+	1254	10	FSM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	62	5	5	-5	multi-exon	FALSE	canonical	3	42	junction_6	11.0565326201412	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAAACCTATTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	71283681	71355530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
tx.11242	chr2	+	2783	9	FSM	ENSMUSG00000041921.17	ENSMUST00000139045.8	2770	9	-13	0	5	0	multi-exon	FALSE	canonical	3	42	junction_5	11.7147076361299	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTCCAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	71283681	71355538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_71283743_71337128_71337287_71340084_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
tx.11243	chr2	+	5811	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	2	-74	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	857	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTGTCCCATATAATT	NA	False	NA	NA	False	NA	NA	NA	71617274	71688686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
tx.11244	chr2	+	5410	24	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	29701	-1571	-10121	-74	3prime_fragment	FALSE	canonical	3	444	junction_19	38.9262790218602	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTGTCCCATATAATT	2676	False	NA	NA	False	NA	NA	NA	71646984	71688686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
tx.11245	chr2	+	3785	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	72	1328	-24	544	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	386	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCTGGCTGGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	71703639	71732874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
tx.11246	chr2	+	4963	10	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-28	-12	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	73.9676272199076	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCCTGTAGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	71703635	71734190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_71703910_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
tx.11247	chr2	+	3342	20	FSM	ENSMUSG00000004085.15	ENSMUST00000090824.12	3334	20	-10	2	-10	-2	multi-exon	FALSE	canonical	2	3	junction_12	12.7949955590981	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGATTGTATGGTGGC	3224	False	NA	NA	False	NA	NA	NA	72115970	72272952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72240492_72240538_72242273_72242305_72242414_72242555_72246884_72246948_72248298_72248392_72263711_72263829_72265574_72265650_72268545_72268697_72271575
tx.11248	chr2	+	6679	12	FSM	ENSMUSG00000004085.15	ENSMUST00000135469.8	6663	12	-16	0	-16	0	multi-exon	FALSE	canonical	3	17	junction_11	6.87671841784634	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTTATGTGTCGCT	3309	False	NA	NA	False	NA	NA	NA	72116055	72237846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72232332
tx.11249	chr2	+	2396	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	27	1	27	-1	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	1783	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTTTATTTTTGTT	8596	False	NA	NA	False	NA	NA	NA	72306529	72317236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
tx.1125	chr1	+	3292	23	FSM	ENSMUSG00000026519.17	ENSMUST00000027800.15	3306	23	7	7	7	2	multi-exon	TRUE	canonical	3	13	junction_1	9.65307299163423	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	NA	False	NA	NA	NA	180770030	180802670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
tx.11250	chr2	-	4052	6	ISM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	667	79	-493	-79	3prime_fragment	FALSE	canonical	3	117	junction_5	121.127370977826	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGTATAGAGGTGCTG	3552	False	NA	NA	False	NA	NA	NA	72810123	72766849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830
tx.11251	chr2	-	4202	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-31	10	-31	-10	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTTAGCTTGAAAA	2854	False	NA	NA	False	NA	NA	NA	72810821	72766780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
tx.11252	chr2	-	4072	6	FSM	ENSMUSG00000027109.17	ENSMUST00000066003.7	3808	6	-51	-213	-31	-8	multi-exon	FALSE	canonical	2	7	junction_4	184.227685215876	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTAGCTTGAAAAAG	2854	False	NA	NA	False	NA	NA	NA	72810821	72766778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809830_72809977_72810593
tx.11253	chr2	-	3498	4	ISM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	7970	-215	-850	-10	3prime_fragment	FALSE	canonical	3	407	junction_3	18.3545331972483	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTTAGCTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	72801660	72766780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498
tx.11254	chr2	-	4107	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	-22	-215	-22	-10	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	458	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTTAGCTTGAAAA	4023	False	NA	NA	False	NA	NA	NA	72809652	72766780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
tx.11255	chr2	+	505	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	8	70	8	0	multi-exon	FALSE	canonical	1	97	junction_1	49.5	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCTCCTGCAAGCTTG	NA	False	NA	NA	False	NA	NA	NA	72809775	72818951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_72809940_72817871_72817977_72818715
tx.11256	chr2	-	1745	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	32	398	-3	1	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGTTTGGGGAT	NA	False	NA	NA	False	NA	NA	NA	73044759	72923542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
tx.11257	chr2	-	1005	8	FSM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	-100	0	-7	0	multi-exon	FALSE	canonical	3	49	junction_1	132.211333609089	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTGTTTTGTTCAATG	NA	False	NA	NA	False	NA	NA	NA	73044777	72967870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_72968000_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
tx.11258	chr2	-	1904	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	12	-760	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCCTTAAGACTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	73142899	73114208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
tx.11259	chr2	+	3254	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	51	4	-2	-4	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCATTTGATCTTTGA	NA	False	NA	NA	False	NA	NA	NA	73142995	73168158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
tx.1126	chr1	+	2114	9	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	21202	-3	5170	3	3prime_fragment	FALSE	canonical	3	35	junction_5	8.24621125123532	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTCTCATGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	180792801	180802671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
tx.11260	chr2	+	3362	9	NNC	ENSMUSG00000008226.15	novel	3309	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	37.6164857476081	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGATCTTTGATAAA	NA	False	NA	NA	False	NA	NA	NA	73142993	73168162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_73143058_73144303_73144406_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
tx.11261	chr2	+	1902	4	FSM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	91	junction_1	8.65383665716478	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATTACTTTGGTTGTA	NA	False	NA	NA	False	NA	NA	NA	73142992	73151140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646
tx.11262	chr2	-	3879	4	ISM	ENSMUSG00000075284.11	ENSMUST00000102679.8	2039	8	16328	-2535	15059	-2	3prime_fragment	FALSE	canonical	3	52	junction_1	2.16024689946929	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGACTTGTGGCTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	73267995	73259955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297
tx.11263	chr2	-	4484	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	242	2	-13	-2	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGACTTGTGGCTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	73359836	73259955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
tx.11264	chr2	-	4443	8	NIC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-35	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	16.5849698368672	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGACTTGTGGCTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	73316848	73259955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73316723
tx.11265	chr2	-	2107	12	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-22	0	intron_retention	FALSE	canonical	1	28	junction_7	85.6295114031401	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	73605712	73442679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
tx.11266	chr2	-	2399	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	-25	1676	-25	0	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	308	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	73605715	73442679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
tx.11267	chr2	-	2321	12	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-25	0	intron_retention	FALSE	canonical	1	16	junction_6	88.3547507691073	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	73605715	73442679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
tx.11268	chr2	-	3799	11	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	101.64742987405	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCTTGTTTTTAATC	NA	False	NA	NA	False	NA	NA	NA	73722939	73646855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
tx.11269	chr2	-	4118	13	FSM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	-85	4	-7	-4	multi-exon	FALSE	canonical	3	85	junction_9	68.6093510795398	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTGCTTGTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	73722965	73646856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
tx.1127	chr1	-	1710	9	FSM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	29	2	29	-2	multi-exon	FALSE	canonical	3	106	junction_5	19.7214984217731	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGGGCCAGATACC	5757	False	NA	NA	False	NA	NA	NA	180845105	180817120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
tx.11270	chr2	-	4200	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-52	-1752	5	-5	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTGCTTGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	73722951	73646857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
tx.11271	chr2	-	3917	12	FSM	ENSMUSG00000027104.19	ENSMUST00000112016.9	3943	12	19	7	-6	4	multi-exon	FALSE	canonical	3	57	junction_5	77.3989343681314	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATAATTTGCTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	73722964	73646859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
tx.11272	chr2	-	4254	15	NIC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	95.5978236025853	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	73722946	73646861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
tx.11273	chr2	-	688	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	26	0	-9	0	multi-exon	FALSE	canonical	3	2058	junction_4	989.165146727279	833	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	NA	False	NA	NA	NA	73741644	73738790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
tx.11274	chr2	-	3468	13	NIC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	69.9761864255739	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	74409298	74350677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74408895
tx.11275	chr2	-	3132	12	FSM	ENSMUSG00000009207.16	ENSMUST00000134641.8	2120	12	-13	-999	4	0	multi-exon	FALSE	canonical	2	13	junction_8	78.2650719516906	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	74409288	74350677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
tx.11276	chr2	-	3192	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	3	0	3	0	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	74409289	74350677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
tx.11277	chr2	-	3277	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	1	43	1	0	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	74409291	74350677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
tx.11278	chr2	-	539	2	Genic_Genomic	ENSMUSG00000075279.6	novel	580	1	NA	NA	1	0	multi-exon	FALSE	canonical	2	50	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGACTGGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	74422252	74421673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_-_74421900_74421939
tx.11279	chr2	+	2579	2	FSM	ENSMUSG00000001819.5	ENSMUST00000001872.5	2483	2	-96	0	-96	0	multi-exon	FALSE	canonical	3	3	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTATTTGACATTTTT	NA	False	NA	NA	False	NA	NA	NA	74498557	74501943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_74499423_74500229
tx.1128	chr1	-	3559	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	17	5816	17	305	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	730	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTTGCTTCTCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	180971752	180920518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
tx.11280	chr2	+	1909	2	FSM	ENSMUSG00000043342.10	ENSMUST00000059272.10	2136	2	207	20	207	-20	multi-exon	FALSE	canonical	2	6	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCCGCTGGCCCTGAA	NA	False	NA	NA	False	NA	NA	NA	74528277	74530532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_74529178_74529523
tx.11281	chr2	+	2670	2	FSM	ENSMUSG00000027102.5	ENSMUST00000019749.4	2634	2	-39	3	-39	-3	multi-exon	FALSE	canonical	2	3	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCAGAGCTCTTTCGT	NA	False	NA	NA	False	NA	NA	NA	74535209	74538274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_74536463_74536857
tx.11282	chr2	+	1241	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	17	1692	-10	235	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	413	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTCATTTACTTTGA	NA	False	NA	NA	False	NA	NA	NA	74656163	74707083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
tx.11283	chr2	+	2088	8	NIC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	-5	235	intron_retention	FALSE	canonical	3	792	junction_1	49.0946607513049	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTCATTTACTTTGA	NA	False	NA	NA	False	NA	NA	NA	74656168	74707083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74699774_74700751_74700829_74706646
tx.11284	chr2	+	678	2	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGATGGTCGTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	75464341	75465116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_75464502_75464598
tx.11285	chr2	+	1930	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-282	0	0	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	3129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	NA	NA	NA	75489610	75496465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
tx.11286	chr2	+	2688	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2462	0	824	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	1321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAATGGGGCGTGCTAG	7481	False	NA	NA	False	NA	NA	NA	75489610	75497289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
tx.11287	chr2	+	2980	10	ISM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	2203	-1453	-1025	1171	3prime_fragment	FALSE	canonical	3	8907	junction_5	831.603018420997	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGTCCTTTTATTCAT	9678	False	NA	NA	False	NA	NA	NA	75491807	75497636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
tx.11288	chr2	-	2378	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	95	2	-57	-2	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	647	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGGACTTTTTGAATT	NA	False	NA	NA	False	NA	NA	NA	75534890	75505858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
tx.11289	chr2	+	5592	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	67	1700	55	-1700	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	898	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	554	False	NA	NA	False	NA	NA	NA	75662587	75759994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
tx.1129	chr1	-	6331	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	34	1737	intron_retention	TRUE	canonical	2	24	junction_10	146.974105729894	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGATCATGCATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	180971735	180917479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
tx.11290	chr2	-	4644	2	ISM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	21	1	21	-1	intron_retention	FALSE	canonical	3	234	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTGCGTTATGTTTATG	NA	False	NA	NA	False	NA	NA	NA	76190773	76184286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_76184581_76186423
tx.11291	chr2	-	653	4	FSM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	1	1	1	-1	multi-exon	FALSE	canonical	3	132	junction_3	45.146674542232	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTGCGTTATGTTTATG	NA	False	NA	NA	False	NA	NA	NA	76190793	76184286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_76184581_76186423_76186617_76187916_76187946_76190656
tx.11292	chr2	+	1883	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	12	3	12	-3	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGACTTATTTATAT	NA	False	NA	NA	False	NA	NA	NA	76200339	76214109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
tx.11293	chr2	+	2350	17	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	5	5	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	10.9784946030865	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGTTCTCAGAGTTGTC	NA	False	NA	NA	False	NA	NA	NA	76236856	76410377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
tx.11294	chr2	+	3347	25	FSM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	-43	549	7	2	multi-exon	FALSE	canonical	2	5	junction_10	10.6640621820309	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATAGCTACGCGTGG	NA	False	NA	NA	False	NA	NA	NA	76236858	76426391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
tx.11295	chr2	+	3967	26	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	7	-22	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	8.49621092016906	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTCATAGGTGTATG	NA	False	NA	NA	False	NA	NA	NA	76236858	76426918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
tx.11296	chr2	+	2179	15	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	10	7	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	12.7793280140153	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCTCAGAGTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	76236861	76410379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
tx.11297	chr2	-	1585	8	FSM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	-10	39	-10	-39	multi-exon	TRUE	canonical	3	32	junction_1	7.52953368748825	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTCTGCTCATTTTA	NA	False	NA	NA	False	NA	NA	NA	76478369	76460280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
tx.11298	chr2	+	2538	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	-5	1	-5	-1	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTATTTTGTTTATT	6501	False	NA	NA	False	NA	NA	NA	76505619	76527171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
tx.11299	chr2	+	6867	7	NIC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	-50	-245	intron_retention	FALSE	canonical	3	204	junction_6	24.6418794377016	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGTTGTATCTATCGC	6456	False	NA	NA	False	NA	NA	NA	76505574	76526927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
tx.113	chr1	-	5260	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	4	443	combination_of_known_junctions	FALSE	canonical	1	7	junction_12	45.2966553097303	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	NA	False	NA	NA	NA	30912998	30842183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30902067_30902337_30912658
tx.1130	chr1	-	5178	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	18	-156	intron_retention	FALSE	canonical	3	480	junction_17	72.5892678986292	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTAACATCTGAACCTT	NA	False	NA	NA	False	NA	NA	NA	180971751	180920979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
tx.11300	chr2	-	5604	6	ISM	ENSMUSG00000051747.16	ENSMUST00000111846.9	100404	312	268787	-1051	115147	0	intron_retention	FALSE	canonical	1	3	junction_3	1.83303027798234	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTGGTTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	76541739	76534323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_76535674_76536013_76536317_76536783_76536938_76537040_76537733_76538502_76538660_76538791
tx.11301	chr2	-	6315	24	FSM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	-2	-91	-2	-2	multi-exon	TRUE	canonical	3	17	junction_12	5.82219207901242	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTGAGGACCTCAATCT	NA	False	NA	NA	False	NA	NA	NA	77000963	76840247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
tx.11302	chr2	-	8396	12	ISM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	48747	4	-17594	-4	3prime_fragment	FALSE	canonical	3	90	junction_7	12.5177559840425	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGGGGAATTTACTCAT	NA	False	NA	NA	False	NA	NA	NA	77047365	77010687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266
tx.11303	chr2	-	3515	19	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-225	480	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	32.5521898146407	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTATGTTTGTATTAA	NA	False	NA	NA	False	NA	NA	NA	77111161	77016418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
tx.11304	chr2	-	3425	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-225	-480	-225	480	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTATGTTTGTATTAA	NA	False	NA	NA	False	NA	NA	NA	77111161	77016418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
tx.11305	chr2	-	2666	2	Antisense	novelGene_ENSMUSG00000081611.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGGTTGTTTGTTTGTTGT	7343	False	NA	NA	False	NA	NA	NA	77139808	77114974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_77117450_77139617
tx.11306	chr2	-	3136	21	NIC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	9	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_20	72.1889707642379	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	77776515	77726109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77770645_77770707_77776493
tx.11307	chr2	-	3090	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111818.8	3255	20	167	-2	-3	0	multi-exon	TRUE	canonical	3	78	junction_1	52.4085273558816	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	77776530	77726109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
tx.11308	chr2	-	3275	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	0	113	0	0	multi-exon	FALSE	canonical	3	143	junction_19	43.213763581536	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	77776697	77726109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
tx.11309	chr2	+	1681	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-5	573	-5	423	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	257	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGTAGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	78699385	78751064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
tx.1131	chr1	-	3890	13	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	18	28059	18	-19215	5prime_fragment	FALSE	canonical	3	480	junction_8	91.666818181693	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACACATATATGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	180971751	180942761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
tx.11310	chr2	+	5243	18	FSM	ENSMUSG00000027007.17	ENSMUST00000111785.9	5168	18	-75	0	-75	0	multi-exon	FALSE	canonical	3	47	junction_14	7.70386143235054	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTTATTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	79465620	79503310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
tx.11311	chr2	+	3063	8	ISM	ENSMUSG00000027007.17	ENSMUST00000133266.2	4804	16	18310	0	18310	0	3prime_fragment	FALSE	canonical	3	47	junction_4	9.82292196438348	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTTATTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	79487835	79503310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
tx.11312	chr2	+	1158	2	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	57	junction_1	0	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATATTTTAAATGCAT	NA	False	NA	NA	False	NA	NA	NA	80026597	80042273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_80026685_80041202
tx.11313	chr2	+	3818	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	228	-4	228	4	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	497	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	NA	False	NA	NA	NA	80146037	80184391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
tx.11314	chr2	+	3680	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	229	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	62.7204377040301	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	NA	False	NA	NA	NA	80146038	80184387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_80146150_80147592_80147811_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
tx.11315	chr2	-	4481	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-18	6	-18	0	multi-exon	TRUE	canonical	3	653	junction_15	66.8594213422628	1660	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAATGATTTCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	80411626	80330861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
tx.11316	chr2	+	4251	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	184	-2803	-2	2103	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGAGTAATTGCTTCATT	NA	False	NA	NA	False	NA	NA	NA	80447572	80464808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
tx.11317	chr2	+	1545	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	18	-4	2	0	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	267	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTGGAAGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	80469177	80489250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
tx.11318	chr2	+	2028	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	81	2	-21	-2	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	878	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATGGGCCTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	83474859	83494964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
tx.11319	chr2	+	7056	30	FSM	ENSMUSG00000027087.12	ENSMUST00000028499.11	7054	30	-4	2	-4	-2	multi-exon	FALSE	canonical	3	32	junction_1	22.0930902622631	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGTGTGGATTCTAT	NA	False	NA	NA	False	NA	NA	NA	83554736	83637258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
tx.1132	chr1	+	3242	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	22	4	22	-4	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	364	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTGATTGTTCTATTG	NA	False	NA	NA	False	NA	NA	NA	180978517	180996555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
tx.11320	chr2	+	7030	30	NIC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	19	-2	intron_retention	FALSE	canonical	3	66	junction_1	18.5760640227655	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGTGTGGATTCTAT	NA	False	NA	NA	False	NA	NA	NA	83554759	83637258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
tx.11321	chr2	+	5676	8	FSM	ENSMUSG00000048388.4	ENSMUST00000051454.4	5614	8	-62	0	-62	0	multi-exon	FALSE	canonical	1	2	junction_6	1.35526185435788	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTAGTGTTTAATTTC	NA	False	NA	NA	False	NA	NA	NA	83642917	83713830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_83643322_83683713_83683948_83685780_83685874_83688561_83688718_83690750_83690922_83707014_83707132_83708499_83708624_83709453
tx.11322	chr2	-	1336	9	NIC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_8	41.6863286941894	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGACTGTCCCCCTT	NA	False	NA	NA	False	NA	NA	NA	84307105	84263198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
tx.11323	chr2	-	1302	9	NIC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	40.1230529122598	43	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGACTGTCCCCCTT	NA	False	NA	NA	False	NA	NA	NA	84307121	84263198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
tx.11324	chr2	-	4372	14	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-7740	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.0433653715364	13	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	84450662	84431126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262
tx.11325	chr2	-	5339	18	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	52.9317638691323	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	84481086	84431126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
tx.11326	chr2	-	5292	17	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	69.6614301012404	57	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	84481082	84431126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
tx.11327	chr2	-	5363	18	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.9943769156057	111	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	84481090	84431126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
tx.11328	chr2	+	3434	4	NIC	ENSMUSG00000086598.10	novel	3052	5	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	3.2659863237109	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGCTTTGTGGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	84489395	84499124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_84489938_84490440_84490526_84491774_84491945_84496487
tx.11329	chr2	-	722	3	ISM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	24	0	-8	0	intron_retention	FALSE	canonical	3	329	junction_1	943.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGCAAGTTTAAATTT	382	False	NA	NA	False	NA	NA	NA	84501028	84499564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_84499742_84500355_84500461_84500588
tx.1133	chr1	-	6997	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	-545	0	-4	0	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAATTCTCGTTGCGTTC	NA	False	NA	NA	False	NA	NA	NA	181039547	181000796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
tx.11330	chr2	-	669	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	72	6	-1	0	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	311	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGCAAGTTTAAATTT	368	False	NA	NA	False	NA	NA	NA	84501042	84499564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
tx.11331	chr2	-	2001	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-23	-1	-23	0	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	1097	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	5268	False	NA	NA	False	NA	NA	NA	84508423	84501659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
tx.11332	chr2	+	2046	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	14	-1	14	1	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	238	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCTGGAGTCTTCCCTG	3371	False	NA	NA	False	NA	NA	NA	84508759	84518560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
tx.11333	chr2	-	4407	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	12	-165	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	91.0773846791837	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGACTTGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	84545512	84518478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84540661_84541817_84545326
tx.11334	chr2	-	4549	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	-9	166	-9	-166	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	420	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCCTGACTTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	84545533	84518479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
tx.11335	chr2	-	1847	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	64	1	-10	-1	multi-exon	FALSE	canonical	3	238	junction_1	30.5	233	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTATGATTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84557630	84553466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_84554562_84555872_84556501_84557506
tx.11336	chr2	-	1815	8	FSM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	-21	-26	19	26	multi-exon	FALSE	canonical	3	11	junction_7	34.9080424626107	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGTGTACTAGTTCC	NA	False	NA	NA	False	NA	NA	NA	84605769	84595704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083_84605159_84605706
tx.11337	chr2	-	1805	7	ISM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	536	-25	260	25	3prime_fragment	FALSE	canonical	3	78	junction_3	14.4270194041905	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTGTGTACTAGTTC	NA	False	NA	NA	False	NA	NA	NA	84605212	84595705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
tx.11338	chr2	+	1372	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	13	175	7	-175	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	84629184	84640345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
tx.11339	chr2	-	1013	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6391	-4	6391	4	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCAGTTTGCCAGGT	4160	False	NA	NA	False	NA	NA	NA	84646605	84641515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
tx.1134	chr1	-	5195	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	0	1850	0	-1846	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGGTTATTAGTGGTA	NA	False	NA	NA	False	NA	NA	NA	181039543	181002642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
tx.11340	chr2	+	665	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	25	0	25	0	multi-exon	FALSE	canonical	3	373	junction_1	17.5	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	6442	False	NA	NA	False	NA	NA	NA	84657365	84660557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_84657492_84657942_84658058_84660133
tx.11341	chr2	+	3950	14	ISM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	-33	5	-20	0	intron_retention	FALSE	canonical	3	43	junction_1	15.474353663458	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	NA	False	NA	NA	False	NA	NA	NA	84669718	84693925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719
tx.11342	chr2	+	2393	15	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-20	2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.8209880674936	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTGTGTATCTGTGA	NA	False	NA	NA	False	NA	NA	NA	84669718	84693927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
tx.11343	chr2	+	2532	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	2	5	2	0	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	NA	False	NA	NA	False	NA	NA	NA	84669753	84693925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
tx.11344	chr2	+	2897	14	FSM	ENSMUSG00000027075.17	ENSMUST00000111625.2	2487	14	-420	10	6	-2	multi-exon	FALSE	canonical	3	65	junction_5	11.2969598465759	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGTGTGTATCTGTGAC	313	False	NA	NA	False	NA	NA	NA	84670548	84693928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
tx.11345	chr2	+	2544	15	FSM	ENSMUSG00000027075.17	ENSMUST00000111624.8	2556	15	12	0	12	0	multi-exon	FALSE	canonical	3	14	junction_1	20.7551321413303	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	319	False	NA	NA	False	NA	NA	NA	84670554	84693925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
tx.11346	chr2	-	2289	3	FSM	ENSMUSG00000050896.13	ENSMUST00000151799.8	1303	3	-371	-615	-371	615	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGTAAGATTTTTTTT	9938	False	NA	NA	False	NA	NA	NA	84717425	84701652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_84703040_84710731_84711214_84717005
tx.11347	chr2	+	2441	13	NIC	ENSMUSG00000027074.15	novel	2621	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	9.67923034130297	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTCTACCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	84766944	84788853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_84766989_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
tx.11348	chr2	+	2609	13	FSM	ENSMUSG00000027074.15	ENSMUST00000090726.6	2583	13	-26	0	-8	0	multi-exon	FALSE	canonical	3	20	junction_9	6.42693982821961	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTCTACCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	84766981	84788853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_84767194_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
tx.11349	chr2	+	2533	13	NIC	ENSMUSG00000027074.15	novel	2583	13	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	10.5708587898787	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTCTACCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	84767018	84788853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_84767194_84767905_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
tx.1135	chr1	-	3524	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	5	-19	5	19	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2846	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	NA	False	NA	NA	NA	181669939	181642880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
tx.11350	chr2	-	5465	12	FSM	ENSMUSG00000027071.15	ENSMUST00000028465.14	1812	12	-1620	-2033	355	2033	multi-exon	FALSE	canonical	2	7	junction_11	6.62452243717697	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGAATCTATGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	84867451	84826893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84865524
tx.11351	chr2	+	2785	17	FSM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	-46	0	-46	0	multi-exon	FALSE	canonical	3	1260	junction_7	140.688874382447	1116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	84867531	84877453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
tx.11352	chr2	+	5741	12	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	3	133	junction_1	44.7158152361265	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTGTCCAGGATTGTGGT	NA	False	NA	NA	False	NA	NA	NA	84878379	84903387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
tx.11353	chr2	+	3623	11	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	74.1261762132649	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCAGGATTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	84878369	84903388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
tx.11354	chr2	+	4398	8	FSM	ENSMUSG00000033955.14	ENSMUST00000048400.4	4799	8	397	4	397	0	multi-exon	FALSE	canonical	3	208	junction_1	23.1913073088577	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCAGGATTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	84888899	84903388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
tx.11356	chr2	-	2152	4	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-15	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	7.40870359029762	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	87327452	87319427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_87320426_87321167_87321750_87322478_87322789_87327190
tx.11357	chr2	+	682	2	Genic_Genomic	ENSMUSG00000082908.5	novel	253	1	NA	NA	-115	381	multi-exon	FALSE	canonical	1	11	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTAAGGAGTCTACCTG	NA	False	NA	NA	False	NA	NA	NA	87356373	87357122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_+_87356560_87356626
tx.11358	chr2	-	7617	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.717529966976	5	3	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTCGATTGATTC	NA	False	NA	NA	False	NA	NA	NA	90410974	90263233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298810_90299877_90300106_90301436_90301680_90410473
tx.11359	chr2	-	7612	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.1917115525034	17	3	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTCGATTGATTC	NA	False	NA	NA	False	NA	NA	NA	90410972	90263233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
tx.1136	chr1	-	6809	3	ISM	ENSMUSG00000004880.12	ENSMUST00000192075.2	2715	5	-1948	-21	-1948	0	intron_retention	FALSE	canonical	3	1997	junction_2	135.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	181650055	181642899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_181644584_181644829_181644953_181645053
tx.11361	chr2	+	5061	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2172	-6	2172	6	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	483	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAGATTTATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	90509730	90566678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
tx.11362	chr2	+	5482	16	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-54	-3	intron_retention	FALSE	canonical	3	188	junction_7	57.9674238018408	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTTGTCTTGATTAG	NA	False	NA	NA	False	NA	NA	NA	90575893	90611362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
tx.11363	chr2	+	4510	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	179	2	-55	-2	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTGTCTTGATTAGC	NA	False	NA	NA	False	NA	NA	NA	90575892	90611363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
tx.11364	chr2	+	4606	18	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-49	-3	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	87.2084167868991	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTTGTCTTGATTAG	NA	False	NA	NA	False	NA	NA	NA	90575898	90611362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
tx.11365	chr2	+	4143	5	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	28829	0	-1344	0	3prime_fragment	FALSE	canonical	3	295	junction_2	26.5459507269941	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	5025	False	NA	NA	False	NA	NA	NA	90604542	90611365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
tx.11366	chr2	+	1084	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-51	1248	-9	1	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	163	False	NA	NA	False	NA	NA	NA	90677565	90695736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
tx.11367	chr2	+	1110	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	68	1418	-8	1	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	442	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	164	False	NA	NA	False	NA	NA	NA	90677566	90695736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
tx.11368	chr2	+	2337	13	NIC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	704.955687141634	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTTAGCCTGCTGCT	164	False	NA	NA	False	NA	NA	NA	90677566	90696985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90677708_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
tx.11369	chr2	-	917	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	135	-6	10	4	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	306	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGGTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	90735036	90724973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
tx.1137	chr1	-	5261	13	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-1	1839	intron_retention	FALSE	canonical	1	1	junction_8	111.175130862177	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTTAAATGTAGCAGT	5642	False	NA	NA	False	NA	NA	NA	181847546	181730125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
tx.11370	chr2	+	2346	4	FSM	ENSMUSG00000005505.13	ENSMUST00000111464.8	2343	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	7	junction_1	29.2726645334669	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCTGTGTTGACT	2332	False	NA	NA	False	NA	NA	NA	90735080	90740905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90735157_90736009_90736628_90737888_90737996_90739360
tx.11371	chr2	+	2415	4	FSM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	22	0	-4	0	multi-exon	FALSE	canonical	3	67	junction_2	4.10960933531265	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCTGTGTTGACT	2360	False	NA	NA	False	NA	NA	NA	90735108	90740905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90735254_90736009_90736628_90737888_90737996_90739360
tx.11372	chr2	-	1309	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	-1	8	-1	-8	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCCCTGTGGGACTC	NA	False	NA	NA	False	NA	NA	NA	90748390	90741064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
tx.11373	chr2	-	1164	3	ISM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	251	1	-125	-1	intron_retention	FALSE	canonical	3	356	junction_2	10	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGGGACTCCCCTCAC	NA	False	NA	NA	False	NA	NA	NA	90748138	90741057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_90741664_90744327_90744520_90747772
tx.11374	chr2	+	7671	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	182.048826274516	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2394	False	NA	NA	False	NA	NA	NA	90770818	90849842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
tx.11375	chr2	+	4758	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	79	-7	18	0	multi-exon	FALSE	canonical	3	193	junction_2	185.405677653416	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2396	False	NA	NA	False	NA	NA	NA	90770820	90849842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
tx.11376	chr2	+	4737	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	193	junction_2	195.382630878437	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2405	False	NA	NA	False	NA	NA	NA	90770829	90849842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
tx.11377	chr2	+	7680	14	FSM	ENSMUSG00000005506.17	ENSMUST00000068747.14	7614	14	-66	0	19	0	multi-exon	FALSE	canonical	3	151	junction_13	169.345415711454	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2397	False	NA	NA	False	NA	NA	NA	90770821	90849842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
tx.11378	chr2	+	4604	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_9	161.021958148313	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2401	False	NA	NA	False	NA	NA	NA	90770825	90849842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
tx.11379	chr2	+	4603	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111451.10	4678	14	82	-7	21	0	multi-exon	FALSE	canonical	3	395	junction_7	113.564516501784	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2399	False	NA	NA	False	NA	NA	NA	90770823	90849842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
tx.1138	chr1	-	5171	14	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-1	1446	intron_retention	FALSE	canonical	3	25	junction_9	101.725526984315	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTGTGACACTTAGA	5642	False	NA	NA	False	NA	NA	NA	181847546	181730518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
tx.11380	chr2	+	4590	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	280	junction_7	133.754300931789	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2400	False	NA	NA	False	NA	NA	NA	90770824	90849842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
tx.11383	chr2	+	4590	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	24	-1	combination_of_known_junctions	FALSE	canonical	3	185	junction_9	174.629345426316	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTCTTCTGCGTTG	2402	False	NA	NA	False	NA	NA	NA	90770826	90849841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
tx.11384	chr2	+	4758	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_10	210.286454288294	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2399	False	NA	NA	False	NA	NA	NA	90770823	90849842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
tx.11385	chr2	+	1655	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	-49	0	-28	0	multi-exon	FALSE	canonical	3	40	junction_4	10.5791477608992	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	NA	False	NA	NA	NA	90865936	90876074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
tx.11386	chr2	+	1583	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	57	-4	11	2	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	1259	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTTTCTCAGCCTCTGT	NA	False	NA	NA	False	NA	NA	NA	90884410	90889781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
tx.11387	chr2	-	2418	10	FSM	ENSMUSG00000002105.16	ENSMUST00000111436.3	1291	10	-44	-1083	-29	0	multi-exon	FALSE	canonical	3	19	junction_7	11.8831761976001	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4257	False	NA	NA	False	NA	NA	NA	90900672	90892135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896085_90896357_90896472_90898775_90899085_90900499
tx.11388	chr2	-	2269	9	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	1	5	junction_5	17.0105665690476	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4265	False	NA	NA	False	NA	NA	NA	90900664	90892135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896046_90896357_90896472_90898775_90899085_90900499
tx.11389	chr2	-	2378	10	FSM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	91	0	-28	0	multi-exon	FALSE	canonical	3	29	junction_7	9.55684745788763	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4258	False	NA	NA	False	NA	NA	NA	90900671	90892135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775_90899085_90900499
tx.1139	chr1	-	5033	15	NIC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	-2	1442	intron_retention	FALSE	canonical	3	11	junction_12	129.846298462797	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTTTGTGACACT	5641	False	NA	NA	False	NA	NA	NA	181847547	181730522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
tx.11390	chr2	+	1408	5	FSM	ENSMUSG00000002111.9	ENSMUST00000002180.8	2034	5	618	8	-66	-8	multi-exon	FALSE	canonical	3	17	junction_1	7.28010988928052	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCCCAGAGAAGTGTCT	9235	False	NA	NA	False	NA	NA	NA	90927058	90946093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_90927339_90929774_90929872_90943599_90943791_90944589_90944756_90945419
tx.11391	chr2	+	3289	23	NIC	ENSMUSG00000002100.16	novel	4163	35	NA	NA	4618	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	2.43425960709016	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGATGTCTCCTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	90953106	90966860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90953364_90954230_90954364_90954728_90954854_90954931_90955038_90955121_90955289_90955603_90955770_90956290_90956398_90956608_90956639_90958997_90959138_90959344_90959426_90961131_90961292_90961717_90961823_90961908_90962098_90962983_90963119_90963197_90963366_90964515_90964605_90964758_90964955_90965134_90965275_90965436_90965597_90965691_90965829_90966080_90966268_90966448_90966487_90966587
tx.11392	chr2	-	5910	33	NIC	ENSMUSG00000040687.17	novel	5905	35	NA	NA	-36	1	intron_retention	TRUE	canonical	2	6	junction_12	4.88460592064498	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCTCCTGTGCACTCCT	NA	False	NA	NA	False	NA	NA	NA	91013270	90967703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
tx.11393	chr2	+	4646	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	3	3	3	-3	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCTGGTAAAGACTTAT	5063	False	NA	NA	False	NA	NA	NA	91033259	91044439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
tx.11394	chr2	-	1817	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	17	-277	-5	-7	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAGCCCAACAGGGTT	3014	False	NA	NA	False	NA	NA	NA	91067310	91041923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
tx.11395	chr2	-	2322	9	FSM	ENSMUSG00000002109.15	ENSMUST00000111352.8	2228	9	-70	-24	5	-7	multi-exon	FALSE	canonical	3	65	junction_7	15.7594217850783	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAGCCCAACAGGGTT	3024	False	NA	NA	False	NA	NA	NA	91067300	91041923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91065297_91067034
tx.11396	chr2	+	1861	11	FSM	ENSMUSG00000027257.14	ENSMUST00000028694.12	1862	11	1	0	1	0	multi-exon	FALSE	canonical	3	29	junction_1	20.1345474247622	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	4751	False	NA	NA	False	NA	NA	NA	91087158	91095023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
tx.11397	chr2	+	1797	10	NIC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	17.8519286920123	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	4751	False	NA	NA	False	NA	NA	NA	91087158	91095023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_91087272_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
tx.11398	chr2	+	2758	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	310	0	-9	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	231	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5812	False	NA	NA	False	NA	NA	NA	91095628	91107276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
tx.11399	chr2	-	1616	9	FSM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	-52	413	10	1	multi-exon	TRUE	canonical	3	72	junction_5	19.7673974007708	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGAGTCTAAAGCCAGT	NA	False	NA	NA	False	NA	NA	NA	91275039	91108587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
tx.114	chr1	-	4656	3	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	9340	1530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGTGTTTTATATACA	NA	False	NA	NA	False	NA	NA	NA	30892811	30866981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_30870641_30876185_30876348_30891976
tx.1140	chr1	-	4975	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-320	6574	-1	1442	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTTTGTGACACT	5642	False	NA	NA	False	NA	NA	NA	181847546	181730522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
tx.11400	chr2	+	3356	12	FSM	ENSMUSG00000027253.16	ENSMUST00000143874.8	3266	12	-79	-11	-79	11	multi-exon	FALSE	canonical	3	17	junction_6	4.85151420513685	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTAGTGTTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	91287776	91309643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865
tx.11401	chr2	+	2569	13	ISM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	-52	34483	-52	9	5prime_fragment	FALSE	canonical	3	17	junction_6	4.83907704698599	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCCTAGTGTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	91287803	91309641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854
tx.11402	chr2	+	6637	44	FSM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	29	-1	29	1	multi-exon	TRUE	canonical	3	508	junction_5	59.4884084586321	512	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	NA	False	NA	NA	NA	91357135	91451010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
tx.11403	chr2	-	1859	13	ISM	ENSMUSG00000027249.16	ENSMUST00000028681.15	1988	14	505	0	486	0	3prime_fragment	FALSE	canonical	2	10	junction_12	3.05845821725043	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCAGTGTGCCCAATGC	NA	False	NA	NA	False	NA	NA	NA	91466254	91455664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463320_91463458_91463535_91463642_91465243_91465295_91465515_91465541_91466122
tx.11404	chr2	-	3605	5	FSM	ENSMUSG00000075040.10	ENSMUST00000099714.10	3469	5	-3	-133	-3	133	multi-exon	FALSE	canonical	3	3	junction_4	8.1967981553775	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATATGGTATAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	91480127	91473880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480048
tx.11406	chr2	+	2854	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.3500066894048	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	91480565	91502670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_91480598_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
tx.11407	chr2	+	2848	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	352	1	-10	-1	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	91480556	91502670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
tx.11408	chr2	-	3635	17	FSM	ENSMUSG00000027244.15	ENSMUST00000028678.9	3604	17	-37	6	20	-6	multi-exon	FALSE	canonical	3	29	junction_7	76.9829526583646	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGCTTCCTATTCCA	NA	False	NA	NA	False	NA	NA	NA	91540901	91504969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
tx.11409	chr2	-	3448	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	20	-4	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	59.708176379208	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCTTCCTATTCCAAA	NA	False	NA	NA	False	NA	NA	NA	91540901	91504967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
tx.1141	chr1	-	5039	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	8	-1442	-2	1442	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTTTGTGACACT	5641	False	NA	NA	False	NA	NA	NA	181847547	181730522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
tx.11410	chr2	-	3525	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	21	5	21	-4	multi-exon	TRUE	canonical	3	217	junction_4	20.2170445141937	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCTTCCTATTCCAAA	NA	False	NA	NA	False	NA	NA	NA	91540900	91504967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
tx.11411	chr2	-	3481	16	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-113	-6	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	61.7638513479635	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGCTTCCTATTCCA	NA	False	NA	NA	False	NA	NA	NA	91536192	91504969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535925
tx.11412	chr2	+	2115	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	8	22	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	34.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGACTGCTCTTGTGGG	3381	False	NA	NA	False	NA	NA	NA	91541205	91551912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_91541321_91542424_91543211_91550698
tx.11413	chr2	+	2193	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	20	22	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	37.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGACTGCTCTTGTGGG	3393	False	NA	NA	False	NA	NA	NA	91541217	91551912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_91541411_91542424_91543211_91550698
tx.11414	chr2	+	3630	2	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	29	454	intron_retention	FALSE	canonical	3	102	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTTTATACTTTACAG	3402	False	NA	NA	False	NA	NA	NA	91541226	91552344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_91543211_91550698
tx.11415	chr2	+	2370	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-33	-29	-28	29	multi-exon	FALSE	canonical	3	50	junction_1	26	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTTGTGGGATTGTTT	3409	False	NA	NA	False	NA	NA	NA	91541233	91551919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_91541597_91542424_91543211_91550698
tx.11416	chr2	+	4997	19	FSM	ENSMUSG00000040506.17	ENSMUST00000099712.10	5021	19	24	0	20	0	multi-exon	FALSE	canonical	3	41	junction_7	21.1640418320005	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	91560502	91749194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
tx.11417	chr2	+	2818	2	Genic_Genomic	ENSMUSG00000040495.5	novel	1440	1	NA	NA	-5104	1147	multi-exon	FALSE	canonical	1	2	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTATTTTATTCATT	NA	False	NA	NA	False	NA	NA	NA	91752489	91760180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_+_91752689_91757561
tx.11418	chr2	-	904	4	ISM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	24	21	24	2	intron_retention	FALSE	canonical	3	2268	junction_3	242.697342383472	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCTTCTTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	91762009	91760170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716
tx.11419	chr2	-	729	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	46	-2	-35	2	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	347	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCTTCTTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	91762079	91760170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
tx.1142	chr1	-	3995	10	ISM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	95919	6575	22	1441	3prime_fragment	FALSE	canonical	3	260	junction_9	59.695523748063	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	NA	False	NA	56	True	NA	NA	NA	181751307	181730523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124
tx.11420	chr2	-	1244	5	FSM	ENSMUSG00000027239.15	ENSMUST00000028672.13	1054	5	-183	-7	-183	7	multi-exon	FALSE	canonical	3	113	junction_4	1100.19691419309	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTTTTTAATATATAA	NA	False	NA	NA	False	NA	NA	NA	91762825	91760165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762274
tx.11421	chr2	-	790	5	FSM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	-40	21	-29	2	multi-exon	FALSE	canonical	3	95	junction_4	1107.84859073792	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCTTCTTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	91762073	91760170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761971
tx.11422	chr2	-	3584	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	3	-3	3	1	multi-exon	FALSE	canonical	3	212	junction_9	28.4788615565222	422	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	91793999	91763167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
tx.11423	chr2	-	3603	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	79	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_25	54.9293384469741	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	91793923	91763167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771477_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
tx.11424	chr2	-	2622	12	FSM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	-21	2	-21	-2	multi-exon	FALSE	canonical	2	4	junction_10	5.08603662934522	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGACTCTGTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	91854868	91812674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601_91825787_91832189_91832419_91854348
tx.11425	chr2	+	4141	18	NIC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-287	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	6.26629364027566	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTAGTGACAGTTTT	NA	False	NA	NA	False	NA	NA	NA	92014163	92192180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_92014698_92044393_92044435_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
tx.11426	chr2	+	2828	5	ISM	ENSMUSG00000058318.16	ENSMUST00000159961.8	1735	14	122556	-1400	2124	1	3prime_fragment	FALSE	canonical	2	16	junction_4	2.27760839478607	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACGCTGTGTAGTGACA	NA	False	NA	NA	False	NA	NA	NA	92181379	92192175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
tx.11427	chr2	-	2437	15	FSM	ENSMUSG00000040434.17	ENSMUST00000068586.13	2445	15	8	0	8	0	multi-exon	FALSE	canonical	0	0	junction_10	34.8762389144289	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGTGTTTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	92201394	92195390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
tx.11428	chr2	+	1219	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	174	-1	-13	1	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGCTCTGTGTCATCA	NA	False	NA	NA	False	NA	NA	NA	92205824	92211563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
tx.11429	chr2	-	2625	10	ISM	ENSMUSG00000027223.16	ENSMUST00000111279.9	3274	12	3421	-2	3421	2	3prime_fragment	FALSE	canonical	3	69	junction_2	10.4822012578407	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGTGTATTTACT	NA	False	NA	NA	False	NA	NA	NA	92219655	92214018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319
tx.1143	chr1	-	3469	2	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTCAAAATGTACGTG	6818	False	NA	NA	False	NA	NA	NA	181858844	181853224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_181856457_181858607
tx.11430	chr2	-	2984	12	FSM	ENSMUSG00000027223.16	ENSMUST00000050312.3	2930	12	-48	-6	-48	2	multi-exon	FALSE	canonical	3	50	junction_10	15.2158030073021	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGTGTATTTACT	NA	False	NA	NA	False	NA	NA	NA	92231656	92214018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92231373
tx.11431	chr2	-	2916	12	NNC	ENSMUSG00000027223.16	novel	2930	12	NA	NA	-56	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	25.3996160574873	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGTGGGTGTATTTAC	NA	False	NA	NA	False	NA	NA	NA	92231664	92214019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219551_92221380_92221487_92231373
tx.11432	chr2	-	3969	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	7	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	10.1019595513375	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	False	NA	NA	False	NA	NA	NA	92264381	92233990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
tx.11433	chr2	-	3109	2	FSM	ENSMUSG00000049922.9	ENSMUST00000067631.7	3139	2	30	0	30	0	multi-exon	FALSE	canonical	3	54	junction_1	0	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATACAGCATGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	92290109	92283108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_92285120_92289011
tx.11434	chr2	+	3523	6	FSM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	29	209	29	-209	multi-exon	FALSE	canonical	1	1	junction_4	1.85472369909914	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGAATTTTCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	92745471	92786194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_92745715_92771097_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
tx.11435	chr2	+	2665	8	FSM	ENSMUSG00000068735.15	ENSMUST00000111266.8	2703	8	34	4	-2	-2	multi-exon	FALSE	canonical	3	75	junction_2	82.3119997699148	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCGTGGTGTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	93017926	93032100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_93018093_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
tx.11436	chr2	+	2669	8	FSM	ENSMUSG00000068735.15	ENSMUST00000090554.11	2654	8	-9	-6	-9	-2	multi-exon	FALSE	canonical	3	171	junction_2	50.0424309757148	355	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCGTGGTGTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	93017919	93032100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
tx.11437	chr2	-	3706	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.7932571498307	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	93164873	93032104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_93033509_93033594_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
tx.11438	chr2	-	3795	10	FSM	ENSMUSG00000027217.14	ENSMUST00000111265.9	3751	10	-44	0	-26	0	multi-exon	FALSE	canonical	3	49	junction_2	5.53774924194538	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	93164876	93032104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
tx.11439	chr2	-	3724	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_1	10.0776981498753	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	93164887	93032104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_93033454_93033535_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
tx.1144	chr1	+	1250	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	53	-480	9	-8	multi-exon	FALSE	canonical	3	66	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGATTTCTTGTATAG	NA	False	NA	NA	False	NA	NA	NA	181952354	181959964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_181952541_181958900
tx.11440	chr2	-	1784	10	FSM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	40	0	-19	0	multi-exon	TRUE	canonical	2	9	junction_8	1.4229164972073	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCTGAAGAGGCGGTA	NA	False	NA	NA	False	NA	NA	NA	93292807	93249455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
tx.11441	chr2	-	3053	16	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	164.700725222717	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	NA	False	NA	NA	NA	93652905	93525977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93651954_93652027_93652731
tx.11442	chr2	-	2866	14	FSM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	3	2	0	-2	multi-exon	FALSE	canonical	3	390	junction_9	31.3157237855525	571	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	NA	False	NA	NA	NA	93652910	93525977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
tx.11443	chr2	-	2938	15	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	124.260444885995	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	NA	False	NA	NA	NA	93652910	93525977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
tx.11444	chr2	-	3103	15	NIC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-23	-854	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	5.05682000583653	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTATTTGTGCGTTGCT	NA	False	NA	NA	False	NA	NA	NA	93680311	93664665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678535_93680109
tx.11445	chr2	-	2358	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61379	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_14	11.1785143768512	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	93760881	93685706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
tx.11446	chr2	-	2433	15	FSM	ENSMUSG00000075023.12	ENSMUST00000099690.4	2224	15	-213	4	-213	2	multi-exon	FALSE	canonical	3	27	junction_14	17.5243271145093	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCCAGGCCTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	93699715	93685709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93699366
tx.11447	chr2	-	1400	11	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	43.1723291009415	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAAAAGCTTTTTGCCT	8860	False	NA	NA	False	NA	NA	NA	93841090	93810970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
tx.11448	chr2	-	1259	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	-25	-6	-1	-2	multi-exon	FALSE	canonical	3	71	junction_3	32.7210431781547	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATCCAAAAGCTTTT	8850	False	NA	NA	False	NA	NA	NA	93841100	93810975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
tx.11449	chr2	-	1835	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	62	5	7	-5	multi-exon	TRUE	canonical	3	670	junction_5	45.0653969249135	714	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTGTATTTTTGATAG	NA	False	NA	NA	False	NA	NA	NA	93988247	93863038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
tx.1145	chr1	+	1317	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	39	11	8	-11	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTGGATTTCTTGTA	NA	False	NA	NA	False	NA	NA	NA	181952353	181959961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_181952541_181956248_181956318_181958900
tx.11450	chr2	-	4580	25	FSM	ENSMUSG00000027194.17	ENSMUST00000111238.8	4590	25	10	0	0	0	multi-exon	TRUE	canonical	3	116	junction_1	40.2833497103814	331	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTGGTGTAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	94237024	94131111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
tx.11451	chr2	-	3423	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	9	-24	0	24	multi-exon	FALSE	canonical	3	95	junction_1	34.6292592408193	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTTTATTGTTTAATGT	NA	False	NA	NA	False	NA	NA	NA	94237024	94158257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
tx.11452	chr2	+	1471	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	574	-5	574	5	multi-exon	FALSE	canonical	3	34	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCTAAGTTATAATTAT	NA	False	NA	NA	False	NA	NA	NA	94237069	94242032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_94237312_94240803
tx.11453	chr2	-	3701	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-6	-46	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	211.688282609319	1086	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	94268487	94242072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
tx.11454	chr2	-	3698	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	-8	46	-8	-46	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	1510	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	94268489	94242072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
tx.11455	chr2	-	963	7	FSM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	-21	1331	-2	12	multi-exon	FALSE	canonical	3	119	junction_5	14.4299072146089	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTACGCGGCTGTATT	NA	False	NA	NA	False	NA	NA	NA	101459356	101392456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101459225
tx.11456	chr2	+	5279	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	1	-697	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGTAGTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	101508774	101531317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
tx.11457	chr2	+	5475	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-9	703	2	-703	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAGAGTTGTAGT	NA	False	NA	NA	False	NA	NA	NA	101508775	101531311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
tx.11458	chr2	+	1186	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	4	1	-3	-1	multi-exon	FALSE	canonical	3	160	junction_2	9.72830920561225	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGCTGGTCGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	101716601	101731990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
tx.11459	chr2	-	3832	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	1	0	1	0	multi-exon	FALSE	canonical	3	53	junction_4	7.56306816047562	148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGTGTGAATGGTTCT	NA	False	NA	NA	False	NA	NA	NA	102016729	101780547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
tx.1146	chr1	-	3913	2	FSM	ENSMUSG00000038633.6	ENSMUST00000132551.2	1405	2	21	-2529	21	-196	multi-exon	FALSE	canonical	3	1179	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCTTAGTGGAATTTC	NA	False	NA	NA	False	NA	NA	NA	182110348	182103532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_182107284_182110186
tx.11460	chr2	-	5848	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-242	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	232	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTCTCTCAGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	102231487	102130465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_102134850_102187745_102188002_102211208_102211287_102230357
tx.11461	chr2	-	2467	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	38	1	-13	-1	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	431	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGATATGACATGCAAA	NA	False	NA	NA	False	NA	NA	NA	102903820	102851420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
tx.11462	chr2	-	2658	12	NNC	ENSMUSG00000010914.11	novel	2506	11	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	135.003336353019	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGATATGACATGCAAAA	NA	False	NA	NA	False	NA	NA	NA	102903850	102851419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102876466_102876627_102877065_102877167_102888841_102888923_102903634
tx.11463	chr2	+	882	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	34	3	14	3	multi-exon	FALSE	canonical	3	304	junction_6	40.9691618442729	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGGAAATTTTCTTGA	4627	False	NA	NA	False	NA	NA	NA	102904053	102922986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
tx.11464	chr2	+	1436	6	ISM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	31	0	11	0	intron_retention	FALSE	canonical	3	333	junction_2	37.3363094051889	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAATTTTCTTGATGT	4624	False	NA	NA	False	NA	NA	NA	102904050	102922989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093
tx.11465	chr2	-	2430	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	28	155	-7	-155	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	915	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACCGTGTTTGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	103315477	103284348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
tx.11466	chr2	+	4558	17	FSM	ENSMUSG00000032724.6	ENSMUST00000076212.4	4558	17	1	-1	1	1	multi-exon	FALSE	canonical	2	10	junction_9	4.07546009672528	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCATCTGCTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	103396655	103548769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
tx.11467	chr2	-	3837	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	40	2	11	-2	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	748	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	NA	False	NA	NA	NA	103591575	103551602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
tx.11468	chr2	-	4033	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	41	-5	41	5	multi-exon	FALSE	canonical	3	1559	junction_1	126.714184008996	1645	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	NA	False	NA	NA	NA	103627408	103595357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
tx.11469	chr2	-	4091	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	6	2072	6	5	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	1096	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	NA	False	NA	NA	NA	103627988	103595357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
tx.1147	chr1	-	1838	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	15	195	15	-195	multi-exon	FALSE	canonical	3	1138	junction_1	20.5	534	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCTTAGTGGAATTTCT	NA	False	NA	NA	False	NA	NA	NA	182110354	182103531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_182104459_182106540_182107284_182110186
tx.11470	chr2	+	1710	4	FSM	ENSMUSG00000032698.16	ENSMUST00000123437.8	848	4	-83	-779	-83	-3	multi-exon	FALSE	canonical	2	6	junction_1	3.85861230093008	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCAGTGCTGTTCTTGA	3797	False	NA	NA	False	NA	NA	NA	103799789	103812216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_103800067_103800837_103801058_103806349_103806566_103811219
tx.11471	chr2	+	2004	3	FSM	ENSMUSG00000032698.16	ENSMUST00000111140.3	1706	3	-294	-4	-200	0	multi-exon	FALSE	canonical	3	13	junction_1	1	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTCTTGATGTGAAA	4281	False	NA	NA	False	NA	NA	NA	103800273	103812223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_103801058_103806349_103806566_103811219
tx.11472	chr2	+	2766	11	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-10	-6	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	96.8347045227072	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAACTGTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	103858178	103887843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
tx.11473	chr2	+	3739	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	-25	6	-9	-6	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAACTGTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	103858179	103887843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
tx.11474	chr2	+	2880	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	114	1746	-9	-1509	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	306	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCACCATGGCTACTG	NA	False	NA	NA	False	NA	NA	NA	103858179	103891839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
tx.11475	chr2	+	1669	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	22	0	-17	0	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTATCTTGACTCTCT	NA	False	NA	NA	False	NA	NA	NA	103926167	103945699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
tx.11476	chr2	-	7171	7	ISM	ENSMUSG00000068373.16	ENSMUST00000136156.9	10127	21	208922	0	39771	0	3prime_fragment	FALSE	canonical	0	0	junction_5	1.77169096878911	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTCTCATTCCG	NA	False	NA	NA	False	NA	NA	NA	104031757	103973417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_103979408_103983276_103983429_103985254_103985404_103987127_103987226_103998182_103998534_104022779_104022910_104031456
tx.11477	chr2	-	7554	16	FSM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	-100	0	-100	0	multi-exon	FALSE	canonical	3	39	junction_7	6.77446184824546	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGCTGGCTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	104324891	104256825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
tx.11478	chr2	-	7540	16	NNC	ENSMUSG00000027177.15	novel	7454	16	NA	NA	-93	-4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	9.18114008897225	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACAGCTTGCTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	104324884	104256829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265060_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
tx.11479	chr2	-	6981	16	Fusion	ENSMUSG00000084516.3_ENSMUSG00000027177.15	novel	4125	16	NA	NA	-117	-558	multi-exon	FALSE	canonical	2	5	junction_15	14.2257981615561	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCGTGTGCTAATTTG	NA	False	NA	NA	False	NA	NA	NA	104324152	104257383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265060_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104323565
tx.1148	chr1	-	3903	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	1022	0	-1022	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAATGCCTAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	182169183	182141688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
tx.11480	chr2	+	1912	2	FSM	ENSMUSG00000086454.8	ENSMUST00000127237.2	707	2	-309	-896	-13	114	multi-exon	FALSE	canonical	3	577	junction_1	0	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	NA	False	NA	NA	NA	104389494	104399291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_104390321_104398205
tx.11481	chr2	+	1513	4	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-13	114	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	171.663106759205	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	NA	False	NA	NA	NA	104389494	104399291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_104389830_104390068_104390321_104398205_104398836_104398995
tx.11482	chr2	+	1672	3	FSM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	-10	-892	-10	116	multi-exon	FALSE	canonical	3	184	junction_1	196.5	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	NA	False	NA	NA	NA	104389497	104399293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_104389830_104390068_104390321_104398205
tx.11483	chr2	+	1201	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-2	112	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	198.704694347052	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTGCTGTGTTAATG	NA	False	NA	NA	False	NA	NA	NA	104389526	104399289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_104389552_104390068_104390321_104398205_104398836_104398995
tx.11484	chr2	+	1721	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	2	114	intron_retention	FALSE	canonical	3	251	junction_2	163	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	NA	False	NA	NA	NA	104389525	104399291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_104390321_104398205_104398836_104398995
tx.11485	chr2	+	644	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	-32	1977	-23	0	multi-exon	FALSE	canonical	3	327	junction_1	20.5	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTGCTTTAGCCTTTT	6877	False	NA	NA	False	NA	NA	NA	104420844	104439774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_104421048_104439215_104439318_104439435
tx.11486	chr2	+	2744	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-129	-1971	-34	-6	multi-exon	FALSE	canonical	3	327	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAACTCGGTATTTCA	6866	False	NA	NA	False	NA	NA	NA	104420833	104441745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_104421048_104439215
tx.11487	chr2	-	6012	10	FSM	ENSMUSG00000027175.11	ENSMUST00000111118.8	5474	10	-8	-530	-2	530	multi-exon	TRUE	canonical	1	1	junction_6	48.9330608530107	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAACTTGTCCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	104542509	104507831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_104512304_104514438_104514612_104515707_104515890_104518722_104518920_104520838_104520976_104527854_104528076_104528879_104529001_104530186_104530320_104536700_104536888_104542320
tx.11488	chr2	-	645	3	FSM	ENSMUSG00000027175.11	ENSMUST00000132600.2	630	3	1	-16	1	16	multi-exon	FALSE	canonical	3	159	junction_2	0.5	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAGAAAATTAAAAT	NA	False	NA	NA	False	NA	NA	NA	104542510	104535278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_104535547_104536700_104536888_104542320
tx.11489	chr2	-	1745	9	FSM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	56	0	56	0	multi-exon	FALSE	canonical	3	114	junction_7	14.7394029729837	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACTCAGAATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	104573167	104552128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558556_104560528_104560920_104573026
tx.1149	chr1	+	4365	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	-4	0	-4	0	multi-exon	FALSE	canonical	3	97	junction_1	10.65761582562	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCCTGGTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	182236732	182289997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
tx.11490	chr2	-	6474	12	FSM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-234	2797	-234	-2797	multi-exon	FALSE	canonical	3	14	junction_3	32.5683007674032	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTGATTTATAACTGAT	NA	False	NA	NA	False	NA	NA	NA	104647339	104587936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104600387_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
tx.11491	chr2	-	3972	6	ISM	ENSMUSG00000074994.7	ENSMUST00000117237.2	8973	12	28107	14279	28107	-14279	internal_fragment	FALSE	canonical	3	39	junction_1	22.5920339943087	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCCTTCTAGTGGTCA	NA	False	NA	NA	False	NA	NA	NA	104618934	104599418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864
tx.11492	chr2	-	6071	8	ISM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-229	14285	-229	-14285	5prime_fragment	FALSE	canonical	3	39	junction_1	21.0877660635502	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAATCATCCTTCTAG	NA	False	NA	NA	False	NA	NA	NA	104647334	104599424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
tx.11493	chr2	-	6056	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-234	-14277	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	31.0365156891435	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTCTAGTGGTCATT	NA	False	NA	NA	False	NA	NA	NA	104647339	104599416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_104600526_104606544_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
tx.11494	chr2	-	6570	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-234	-14286	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATCATCCTTCTA	NA	False	NA	NA	False	NA	NA	NA	104647339	104599425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
tx.11495	chr2	-	4875	6	NNC	ENSMUSG00000074994.7	novel	8973	12	NA	NA	27696	-14282	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	24.838679514016	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATCATCCTTCTAGTGG	NA	False	NA	NA	False	NA	NA	NA	104619345	104599421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864
tx.11496	chr2	-	1438	6	FSM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	179	1255	179	-1255	multi-exon	FALSE	canonical	1	4	junction_1	3.61109401705356	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGGTCTTAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	104680042	104662340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
tx.11497	chr2	+	4073	18	FSM	ENSMUSG00000045106.13	ENSMUST00000111114.8	3944	18	1	-130	1	130	multi-exon	FALSE	canonical	2	12	junction_15	13.2482289734989	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAGTGCTGAATAT	NA	False	NA	NA	False	NA	NA	NA	104716669	104830212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
tx.11498	chr2	-	1260	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	23	0	-14	0	multi-exon	FALSE	canonical	3	1722	junction_10	235.400531010446	1301	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2663	False	NA	NA	False	NA	NA	NA	104847402	104830000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
tx.11499	chr2	-	2158	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-75	637	-75	1	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	2042	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTCTTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	105229739	105217272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
tx.115	chr1	-	2885	4	ISM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-316	27087	-3	5	5prime_fragment	FALSE	canonical	3	122	junction_2	3.09120616516523	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTATTTTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	30912978	30868506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_30870641_30876185_30876348_30902067_30902337_30912658
tx.1150	chr1	-	3302	20	NNC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	16	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.0719297068332	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCATGCCTTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	182345157	182294820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311750_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
tx.11500	chr2	-	2601	2	ISM	ENSMUSG00000005973.7	ENSMUST00000127019.2	2208	5	4870	-1	4870	1	3prime_fragment	FALSE	canonical	3	1688	junction_1	0	20	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTCTTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	105220823	105217272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_105218372_105219321
tx.11501	chr2	-	2995	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	54	-1	-27	1	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	195	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTCTCTTACCCTGT	NA	False	NA	NA	False	NA	NA	NA	105734855	105531370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
tx.11502	chr2	+	808	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	13	134	13	-134	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGTTTTAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	105734995	105795769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
tx.11503	chr2	-	1288	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	293	-384	7	384	multi-exon	TRUE	canonical	3	201	junction_2	6.37867541108654	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGCCCAGTTCTGCCC	NA	False	NA	NA	False	NA	NA	NA	105833601	105796669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
tx.11504	chr2	+	2724	7	FSM	ENSMUSG00000016386.16	ENSMUST00000111063.8	2848	7	121	3	121	-3	multi-exon	FALSE	canonical	3	15	junction_1	4.49691252107735	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGGTGCTGCGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	106523734	106698698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_106524167_106529632_106529881_106575044_106575227_106613977_106614204_106691832_106691949_106694999_106695114_106697292
tx.11505	chr2	-	3854	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	1	-6	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATGCAGACTTACTGT	NA	False	NA	NA	False	NA	NA	NA	106804741	106792877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
tx.11506	chr2	-	3300	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	28	9	1	-9	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAATGCAGACTTAC	NA	False	NA	NA	False	NA	NA	NA	106804741	106792880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
tx.11507	chr2	-	3268	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	-7	-19	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_4	54.0046294311886	72	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTTTTAGAAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	106804749	106792890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804646
tx.11508	chr2	-	3822	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	0	-9	intron_retention	FALSE	canonical	3	134	junction_3	55.0292851327566	38	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAATGCAGACTTAC	NA	False	NA	NA	False	NA	NA	NA	106804742	106792880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804646
tx.11509	chr2	-	1882	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	10	2	0	1	multi-exon	FALSE	canonical	3	30	junction_4	7.25534285888682	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	109108625	108922643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
tx.1151	chr1	+	3092	9	FSM	ENSMUSG00000038576.16	ENSMUST00000153348.8	1898	9	165	-1359	165	0	multi-exon	FALSE	canonical	3	16	junction_5	5.55512151082224	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGTTTGAAGTGTGACT	NA	False	NA	NA	False	NA	NA	NA	182591741	182724156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_182591962_182592570_182592754_182660627_182660841_182681521_182681696_182685986_182686176_182714904_182715097_182716332_182716478_182719447_182719831_182722763
tx.11510	chr2	+	3293	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	77	-1	-11	1	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	621	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTTTTCCTGTTTTA	1453	False	NA	NA	False	NA	NA	NA	109111159	109172093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
tx.11511	chr2	+	4213	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	0	15	0	-15	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	345	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTTCTGTTATTTCA	NA	False	NA	NA	False	NA	NA	NA	109721197	109731333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
tx.11512	chr2	+	5077	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	-19	2	-19	-2	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATTGAAAACTGTTTT	NA	False	NA	NA	False	NA	NA	NA	109747972	109844600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
tx.11513	chr2	+	1598	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	3	469	3	-2	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTTGCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	109848164	109875192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
tx.11514	chr2	+	1938	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	337	0	337	0	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGGGTGGAATCATT	NA	False	NA	NA	False	NA	NA	NA	112070149	112077456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
tx.11515	chr2	+	465	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	41	603	41	-603	multi-exon	FALSE	canonical	3	3938	junction_1	0	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	112092311	112093011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_112092423_112092657
tx.11516	chr2	+	7334	25	FSM	ENSMUSG00000027130.16	ENSMUST00000028549.14	6105	25	-1225	-4	-231	-3	multi-exon	FALSE	canonical	3	33	junction_1	16.1464112799787	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	112095938	112193505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
tx.11517	chr2	+	6052	25	FSM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	11	-3	11	3	multi-exon	FALSE	canonical	3	47	junction_1	14.1194679432336	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	NA	NA	NA	112114932	112193504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
tx.11518	chr2	-	956	5	FSM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	19	8	12	-8	multi-exon	FALSE	canonical	3	778	junction_3	24.5395089600424	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTTTCACAAGTTCC	5016	False	NA	NA	False	NA	NA	NA	112198353	112193363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_112193700_112194136_112194298_112194496_112194651_112197746_112197862_112198163
tx.11519	chr2	+	4778	8	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	424	junction_5	43.7712047737658	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	112209568	112244580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
tx.1152	chr1	-	5001	10	FSM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	-19	2	-14	-2	multi-exon	FALSE	canonical	3	35	junction_1	20.4420288428002	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTCTCCGTCGTT	NA	False	NA	NA	False	NA	NA	NA	183003068	182867831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
tx.11520	chr2	+	2870	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	13	3	-2	-3	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	399	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTGGTGTGCATAG	NA	False	NA	NA	False	NA	NA	NA	112209568	112244582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
tx.11521	chr2	+	3549	9	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	424	junction_6	48.6208224426531	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	112209565	112244580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
tx.11522	chr2	+	1065	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	36	4725	36	-4725	multi-exon	FALSE	canonical	3	432	junction_1	48.4355241532493	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	396	False	NA	NA	False	NA	NA	NA	112285377	112297782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
tx.11523	chr2	+	1441	6	FSM	ENSMUSG00000003604.15	ENSMUST00000003705.12	4735	6	-26	3320	-26	342	multi-exon	FALSE	canonical	3	555	junction_4	26.4227174983952	426	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTTTCCTTTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	112323282	112461598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
tx.11524	chr2	+	6441	17	FSM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	-80	-2126	-80	2126	multi-exon	FALSE	canonical	3	8	junction_2	4.19076365356005	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATTTTCCTTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	113271328	113542326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_113273005_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
tx.11525	chr2	-	4558	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.963219861107	362	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5961	False	NA	NA	False	NA	NA	NA	113679057	113661836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
tx.11526	chr2	-	5068	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-56	-54	-51	0	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5961	False	NA	NA	False	NA	NA	NA	113679057	113661836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
tx.11527	chr2	-	7698	11	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-54	-51	-49	0	intron_retention	FALSE	canonical	3	279	junction_2	48.9693781867812	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5963	False	NA	NA	False	NA	NA	NA	113679055	113661839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
tx.11528	chr2	-	3657	2	NNC	ENSMUSG00000041219.15	novel	4878	11	NA	NA	14106	1467	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGTACAACATGAATCG	NA	False	NA	NA	False	NA	NA	NA	113664536	113660369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_113662635_113663144
tx.11529	chr2	-	4874	35	FSM	ENSMUSG00000040383.17	ENSMUST00000043160.13	4888	35	12	2	11	-2	multi-exon	FALSE	canonical	3	207	junction_21	28.9958832539162	484	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAAGGCATACTTGCCC	7821	False	NA	NA	False	NA	NA	NA	114005808	113931652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
tx.1153	chr1	-	4869	9	NIC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	32.4169612240259	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTCTCCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	183003062	182867829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182984515_182984604_183002886
tx.11530	chr2	-	4540	3	NNC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	4	175	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTGCATTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	114031917	114023766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_114028109_114031435_114031534_114031817
tx.11531	chr2	-	4416	2	NNC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGATTTTGTTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	114031922	114023941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_114028109_114031673
tx.11532	chr2	-	4261	2	FSM	ENSMUSG00000040321.4	ENSMUST00000050668.4	4300	2	39	0	10	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGATTTTGTTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	114031911	114023941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_114028109_114031817
tx.11533	chr2	-	2706	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	30	-2	19	-2	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGTGTGAATGTCAG	NA	False	NA	NA	False	NA	NA	NA	114485415	114346898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
tx.11534	chr2	+	2662	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-22	-179	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	114.47061046905	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGTTACCAGTTTG	NA	False	NA	NA	False	NA	NA	NA	115412174	115609070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_115412467_115434044_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
tx.11535	chr2	+	2601	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-39	173	-22	-173	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACCAGTTTGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	115412174	115609076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
tx.11536	chr2	-	5425	12	FSM	ENSMUSG00000027210.21	ENSMUST00000028639.13	2831	12	-782	-1812	10	1812	multi-exon	FALSE	canonical	0	0	junction_2	18.227216050694	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAAAACACTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	115896310	115691732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
tx.11537	chr2	-	2894	12	NIC	ENSMUSG00000027210.21	novel	3229	13	NA	NA	68	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	17.807046613375	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGTGTTTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	115894881	115693544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
tx.11538	chr2	-	2912	13	FSM	ENSMUSG00000027210.21	ENSMUST00000074285.8	2844	13	163	-231	119	-5	multi-exon	FALSE	canonical	0	0	junction_3	17.4825309634758	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	115894830	115693549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
tx.11539	chr2	-	2774	12	NIC	ENSMUSG00000027210.21	novel	2844	13	NA	NA	162	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	17.807046613375	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	115894787	115693549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
tx.1154	chr1	-	1443	9	ISM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	-12	9926	-7	1	5prime_fragment	FALSE	canonical	3	56	junction_6	14.115040736746	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGCCTCTGCCTTGCT	NA	False	NA	NA	False	NA	NA	NA	183003061	182877755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
tx.11540	chr2	+	6552	6	NIC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-638	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.3404790652837	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCTCACTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	116951216	117012760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117007782
tx.11541	chr2	+	6331	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-320	5	-320	-5	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	212	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGGGCTTTTCTCACTT	NA	False	NA	NA	False	NA	NA	NA	116951534	117012755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
tx.11542	chr2	+	5214	39	FSM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	-2	0	-2	0	multi-exon	FALSE	canonical	3	66	junction_24	13.8429307338417	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTTCCATTTGCA	NA	False	NA	NA	False	NA	NA	NA	118219096	118305715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
tx.11543	chr2	+	3027	19	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	-15	31952	-15	-9008	5prime_fragment	FALSE	canonical	3	81	junction_8	8.9504810547317	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAACTCAAGGACTTT	NA	False	NA	NA	False	NA	NA	NA	118219083	118273763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
tx.11544	chr2	-	758	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	40	0	-23	0	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	437	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGTTTGTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	118310152	118306330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
tx.11545	chr2	+	3625	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	43	0	43	0	multi-exon	TRUE	canonical	3	422	junction_10	74.3091181573454	837	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	NA	False	NA	NA	NA	118428734	118472072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
tx.11546	chr2	+	3693	10	FSM	ENSMUSG00000074923.11	ENSMUST00000110853.8	3677	10	-14	-2	-14	0	multi-exon	FALSE	canonical	1	2	junction_3	1.56347191994114	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGGTTTTTCATTCTC	NA	False	NA	NA	False	NA	NA	NA	118507695	118528501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_118507783_118508203_118508310_118519277_118519487_118520214_118520872_118523707_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118525687_118525823_118526887
tx.11547	chr2	+	2874	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	200	1528	-29	-975	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	233	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAACCTGCCTTCCATG	NA	False	NA	NA	False	NA	NA	NA	118644683	118666649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
tx.11548	chr2	+	3493	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-33	-26	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGACAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	118692475	118713364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
tx.11549	chr2	+	3620	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	40	5	-34	-5	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTCTGAAAAGTGGATG	NA	False	NA	NA	False	NA	NA	NA	118692474	118713385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
tx.1155	chr1	-	1361	8	ISM	ENSMUSG00000030768.13	ENSMUST00000195372.2	4901	9	-12	9925	-12	2	5prime_fragment	FALSE	canonical	3	12	junction_7	29.7170328400452	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCTGCCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	183003066	182877754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_183002886
tx.11550	chr2	+	4648	7	FSM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	-58	4	-58	-4	multi-exon	FALSE	canonical	3	30	junction_5	7.79779171019306	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTATTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	118731875	118755005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_118732239_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
tx.11551	chr2	-	1836	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	10	24	-6	-24	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CATAAAATAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	118859864	118848283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
tx.11552	chr2	+	3604	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	24	-922	24	922	multi-exon	FALSE	canonical	3	106	junction_2	2.5	251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAACCATCCATTGCAA	3279	False	NA	NA	False	NA	NA	NA	118865294	118871172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_118865950_118867398_118867696_118868520
tx.11553	chr2	+	7805	24	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	-1	-73	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	14.2823274408149	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATGTGGTAATGAAAT	7241	False	NA	NA	False	NA	NA	NA	118877629	118935909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_118877708_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
tx.11554	chr2	+	8149	24	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	3	-59	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	11.4505594583524	44	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATAATTTGCCTTCGGT	7245	False	NA	NA	False	NA	NA	NA	118877633	118935923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
tx.11555	chr2	+	5536	17	ISM	ENSMUSG00000027326.14	ENSMUST00000028802.3	7800	23	12730	57	12730	-57	3prime_fragment	FALSE	canonical	3	50	junction_5	10.2528578333068	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGCCTTCGGTAT	103	False	NA	NA	False	NA	NA	NA	118900491	118935925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
tx.11556	chr2	+	2132	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	11	1225	1	857	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	747	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGATTTGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	118943298	118966546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
tx.11557	chr2	-	2186	13	FSM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	64	-1	-6	1	multi-exon	TRUE	canonical	3	215	junction_12	29.1989107483291	389	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGACTGTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	118987451	118967480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
tx.11558	chr2	-	1008	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACTTTTCTTCCTCTTG	NA	False	NA	NA	False	NA	NA	NA	119039276	119002980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
tx.11559	chr2	+	1638	11	FSM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	369	1	-9	-1	multi-exon	FALSE	canonical	1	23	junction_1	26.2152627299442	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGATGTTTTTTCTGT	280	False	NA	NA	False	NA	NA	NA	119039483	119047529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
tx.1156	chr1	-	3701	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-272	1	5	-1	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCGCTGGATTTATGTG	NA	False	NA	NA	False	NA	NA	NA	183078808	183057916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
tx.11560	chr2	+	2276	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-3	0	-3	0	multi-exon	TRUE	canonical	3	163	junction_1	46.3102580429002	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	NA	False	NA	NA	NA	119067839	119079995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
tx.11561	chr2	+	2177	10	FSM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	133	13	133	0	multi-exon	FALSE	canonical	3	281	junction_4	16.649620912898	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	NA	False	NA	NA	NA	119068166	119079995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
tx.11562	chr2	-	1749	4	NNC	ENSMUSG00000034226.8	novel	1703	3	NA	NA	-6736	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	7.54247233265651	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTGGTCTCCT	4269	False	NA	NA	False	NA	NA	NA	119108489	119099681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_119100969_119101162_119101222_119101396_119101722_119108411
tx.11563	chr2	-	1658	3	FSM	ENSMUSG00000034226.8	ENSMUST00000037360.8	1703	3	45	0	45	0	multi-exon	FALSE	canonical	3	45	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTGGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	119101708	119099681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119100969_119101162_119101222_119101396
tx.11564	chr2	+	3943	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	8	103	8	24	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCAGAGTCCTGCAAGC	6385	False	NA	NA	False	NA	NA	NA	119119230	119128831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
tx.11565	chr2	+	3158	2	ISM	ENSMUSG00000034216.13	ENSMUST00000151500.2	3914	5	4260	18	4260	-18	3prime_fragment	FALSE	canonical	3	81	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAATTAAATTAAATTA	NA	False	NA	NA	False	NA	NA	NA	119123527	119128789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_119125271_119127374
tx.11566	chr2	+	1535	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	43	59	43	-59	multi-exon	FALSE	canonical	3	568	junction_2	33	376	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATGGTTTGTCTCTGT	7195	False	NA	NA	False	NA	NA	NA	119181752	119184803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119182118_119182837_119182874_119183669
tx.11567	chr2	+	2587	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	19	3	-5	-3	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	238	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGGTTGAGTTTTACC	NA	False	NA	NA	False	NA	NA	NA	119378196	119417505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
tx.11568	chr2	+	199	2	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGAGCAAATTCAAGTG	NA	False	NA	NA	False	NA	NA	NA	119401889	119403531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_119402036_119403478
tx.11569	chr2	+	1404	2	ISM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	33	3189	27	-3189	5prime_fragment	FALSE	canonical	3	428	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCGAAGAAAAAAAGAAATGT	NA	False	NA	NA	False	NA	NA	NA	119424810	119428038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_119424916_119426739
tx.1157	chr1	-	3448	14	FSM	ENSMUSG00000046836.14	ENSMUST00000163528.8	3413	14	-31	-4	-18	2	multi-exon	FALSE	canonical	3	26	junction_13	29.2690033348083	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGGATTTATGTGGTG	NA	False	NA	NA	False	NA	NA	NA	183078831	183057913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
tx.11570	chr2	+	3534	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	24	-2177	18	2177	multi-exon	FALSE	canonical	3	71	junction_2	178.5	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAGTTTTCTATAA	NA	False	NA	NA	False	NA	NA	NA	119424801	119433404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119424916_119426739_119426824_119430068
tx.11571	chr2	+	8268	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	20	12	20	-12	multi-exon	FALSE	canonical	3	345	junction_2	41.5	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAACTTGATTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	119424803	119437971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119424916_119426739_119426993_119430068
tx.11572	chr2	+	2174	4	NNC	ENSMUSG00000085438.2	novel	8300	3	NA	NA	27	699	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.32194209597	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTTTAAGGTAA	NA	False	NA	NA	False	NA	NA	NA	119424810	119431926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_119424832_119424873_119424916_119426739_119426993_119430068
tx.11573	chr2	-	1583	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	-27	-474	-27	15	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	507	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTATCTTTTGCTGG	7453	False	NA	NA	False	NA	NA	NA	119448977	119439977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
tx.11574	chr2	+	2148	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	431	381	0	-381	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	1416	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCATTGTTTTAAGCGTA	NA	False	NA	NA	False	NA	NA	NA	119449209	119480260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
tx.11575	chr2	+	2050	10	FSM	ENSMUSG00000027306.16	ENSMUST00000028771.8	3526	10	12	1464	0	-380	multi-exon	FALSE	canonical	3	97	junction_4	379.300265433633	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATTGTTTTAAGCGTAA	NA	False	NA	NA	False	NA	NA	NA	119449209	119480261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
tx.11576	chr2	-	1364	5	NNC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	127.660683062562	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	NA	False	NA	NA	NA	119493289	119485926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493191
tx.11577	chr2	-	1473	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110801.8	1478	5	4	1	-4	-1	multi-exon	FALSE	canonical	3	141	junction_4	75.083287088406	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGCCTTTTTCTGCT	NA	False	NA	NA	False	NA	NA	NA	119493297	119485927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
tx.11578	chr2	-	1319	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	-12	1	-6	-1	multi-exon	FALSE	canonical	3	109	junction_4	88.8453712919249	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGCCTTTTTCTGCT	NA	False	NA	NA	False	NA	NA	NA	119493314	119485927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
tx.11579	chr2	+	4112	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	17	535	13	-535	multi-exon	FALSE	canonical	3	65	junction_14	16.8134482341515	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACACTGTAGCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	119505565	119565353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
tx.1158	chr1	+	2402	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	12	1865	12	2	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGATGGTTGTTACACA	NA	False	NA	NA	False	NA	NA	NA	183078604	183104466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
tx.11580	chr2	+	1854	7	FSM	ENSMUSG00000027296.8	ENSMUST00000028758.8	1818	7	-36	0	-36	0	multi-exon	FALSE	canonical	3	153	junction_1	9.41039614232874	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	NA	False	NA	NA	NA	119572781	119581744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
tx.11581	chr2	-	2411	15	ISM	ENSMUSG00000027297.16	ENSMUST00000028759.13	3080	20	1912	0	0	0	3prime_fragment	FALSE	canonical	3	7	junction_14	8.0156097709407	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGTTCTCTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	119589000	119581806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459_119588643_119588727
tx.11582	chr2	-	2238	14	FSM	ENSMUSG00000027297.16	ENSMUST00000182203.3	2232	14	-7	1	-7	-1	multi-exon	FALSE	canonical	3	10	junction_7	7.17243243134772	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTCAGTTCTCTGAG	NA	False	NA	NA	False	NA	NA	NA	119589013	119581809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
tx.11583	chr2	-	2204	14	ISM	ENSMUSG00000027297.16	ENSMUST00000028759.13	3080	20	2200	4	288	0	3prime_fragment	FALSE	canonical	3	10	junction_7	7.35490819495478	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTCTTCAGTTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	119588712	119581810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459
tx.11584	chr2	-	4778	26	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_25	88.1886704741601	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	484	False	NA	NA	False	NA	NA	NA	119617998	119594443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
tx.11585	chr2	-	4798	26	FSM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	11	4	2	0	multi-exon	FALSE	canonical	3	111	junction_25	84.4691091464803	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	484	False	NA	NA	False	NA	NA	NA	119617998	119594443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
tx.11586	chr2	-	4721	25	FSM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	20	3	2	0	multi-exon	FALSE	canonical	3	120	junction_24	70.0848691865005	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	484	False	NA	NA	False	NA	NA	NA	119617998	119594443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
tx.11587	chr2	+	3959	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	27	3	27	-3	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	511	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTGTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	119630021	119648582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
tx.11588	chr2	+	12427	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24650	-6	intron_retention	TRUE	canonical	3	67	junction_1	51.1541648571319	24	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAATTTGGTGTTGGGAG	8002	False	NA	NA	False	NA	NA	NA	119703058	119798224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
tx.11589	chr2	+	5858	8	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	50172	4	5645	-4	3prime_fragment	FALSE	canonical	3	162	junction_4	22.3506380313441	72	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGGTGTTGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	119777880	119798226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
tx.1159	chr1	-	6416	29	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	45.1999525916313	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4029	False	NA	NA	False	NA	NA	NA	183150908	183107681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
tx.11590	chr2	+	4745	5	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	60969	3	-117	-3	3prime_fragment	FALSE	canonical	3	162	junction_1	27.3952550636055	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGTGTTGGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	119788677	119798227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
tx.11591	chr2	+	1264	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	49.0736408087093	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	135	True	NA	NA	NA	119857976	119863075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862055_119862133_119862321_119862482_119862594
tx.11592	chr2	+	1364	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	9	0	9	0	multi-exon	FALSE	canonical	3	72	junction_5	32.3128836376389	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	131	True	NA	NA	NA	119857972	119863075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
tx.11593	chr2	+	1284	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	49.2084568161025	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	133	True	NA	NA	NA	119857974	119863074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862321_119862482_119862594
tx.11594	chr2	+	5713	19	ISM	ENSMUSG00000033852.17	ENSMUST00000129685.8	4472	25	5142	0	798	0	3prime_fragment	FALSE	canonical	2	8	junction_4	5.13430726691645	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTGGTAAAGTACATG	NA	False	NA	57	True	NA	NA	NA	119863126	119873514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866285_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
tx.11595	chr2	-	3408	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	10	312	10	-312	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	490	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTGAGTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	119985077	119919967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
tx.11596	chr2	-	4375	20	FSM	ENSMUSG00000050211.15	ENSMUST00000090071.5	4477	20	102	0	102	0	multi-exon	FALSE	canonical	0	0	junction_19	6.9306017774238	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTCATCTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	120075714	119996892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166
tx.11597	chr2	-	4579	21	NIC	ENSMUSG00000050211.15	novel	4477	20	NA	NA	-444	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	8.08949936646267	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTCATCTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	120076260	119996892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166_120075555_120075896
tx.11598	chr2	-	4199	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	3	137	-1	-137	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	598	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGCATACTTAATTC	NA	False	NA	NA	False	NA	NA	NA	120183603	120147078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
tx.11599	chr2	+	3891	5	FSM	ENSMUSG00000062646.13	ENSMUST00000154574.8	3099	5	-41	-751	-41	-5	multi-exon	FALSE	canonical	3	9	junction_3	3.77491721763537	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGTCTTTTGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	120234335	120254891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505
tx.116	chr1	-	2847	6	FSM	ENSMUSG00000117310.3	ENSMUST00000076587.6	2851	6	1	3	-1	-3	multi-exon	FALSE	canonical	3	443	junction_5	787.975024984929	495	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTCCTTTTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	30988837	30980663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985718_30988629
tx.1160	chr1	-	2879	22	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	60	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	35.1730416248418	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	NA	False	NA	NA	NA	183126897	183107681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
tx.11600	chr2	+	5334	24	FSM	ENSMUSG00000062646.13	ENSMUST00000135074.2	4780	24	-557	3	1	-3	multi-exon	FALSE	canonical	0	0	junction_16	3.61680597271051	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGGTCATGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	120234691	120292178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
tx.11601	chr2	-	6423	17	ISM	ENSMUSG00000027288.17	ENSMUST00000171215.8	6391	19	7663	-2792	-139	-2	3prime_fragment	FALSE	canonical	3	846	junction_10	115.745882756148	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	6115	False	NA	NA	False	NA	NA	NA	120362678	120337302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075
tx.11602	chr2	-	8198	18	ISM	ENSMUSG00000027288.17	ENSMUST00000171215.8	6391	19	4600	-2792	-3202	-2	3prime_fragment	FALSE	canonical	3	679	junction_17	153.995079236532	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	3052	False	NA	NA	False	NA	NA	NA	120365741	120337302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991
tx.11603	chr2	-	6748	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	3	-3	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	435	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTATTTGTCTGC	9788	False	NA	NA	False	NA	NA	NA	120394321	120337303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
tx.11604	chr2	-	9115	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-33	3	3	-3	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	713	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTATTTGTCTGC	9788	False	NA	NA	False	NA	NA	NA	120394321	120337303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
tx.11605	chr2	-	8916	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	4	-3	intron_retention	FALSE	canonical	3	17	junction_18	276.617511195513	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTATTTGTCTGC	9789	False	NA	NA	False	NA	NA	NA	120394320	120337303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120376323_120376386_120385711_120385797_120394167
tx.11606	chr2	+	2676	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	-20	2	0	-2	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCACAGACCAGTAATGC	NA	False	NA	NA	False	NA	NA	NA	120398151	120431734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
tx.11607	chr2	+	2719	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	1	3	1	-3	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCACAGACCAGTAATG	NA	False	NA	NA	False	NA	NA	NA	120398152	120431733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
tx.11608	chr2	-	1960	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102497.10	1962	6	1	1	1	-1	multi-exon	FALSE	canonical	3	64	junction_5	44.5394207416307	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTGGAAGTAATGT	NA	False	NA	NA	False	NA	NA	NA	120439835	120434719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439595
tx.11609	chr2	+	3121	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	30	3	30	-3	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	212	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGGCTCCAATATGAA	NA	False	NA	NA	False	NA	NA	NA	120439893	120452038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
tx.1161	chr1	-	3033	23	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_22	21.1026613025369	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	NA	False	NA	NA	NA	183126913	183107681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
tx.11610	chr2	+	3054	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	30	-1654	30	0	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	NA	NA	NA	120439893	120452041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
tx.11611	chr2	+	6670	11	ISM	ENSMUSG00000033705.18	ENSMUST00000154193.8	5377	13	-3097	16014	154	0	5prime_fragment	FALSE	canonical	1	3	junction_3	3.71618083521241	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATGGTAGTTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	120531975	120546362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_120536062_120536149_120536348_120536745_120536930_120537298_120537437_120543105_120543224_120543330_120543453_120543655_120543721_120543845_120544049_120544227_120544308_120544485_120544645_120545045
tx.11612	chr2	-	6991	25	ISM	ENSMUSG00000027284.17	ENSMUST00000110700.2	5996	28	-4	-377	-4	9	intron_retention	TRUE	canonical	3	45	junction_16	13.3811642077794	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTGGCTTTTTTATTTT	6110	False	NA	NA	False	NA	NA	NA	120562003	120546625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410
tx.11613	chr2	-	4334	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-4	1	combination_of_known_junctions	TRUE	canonical	3	17	junction_26	17.8771144441848	40	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTGTTCTCCCTGC	6110	False	NA	NA	False	NA	NA	NA	120562003	120548665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561674_120561892
tx.11614	chr2	-	4339	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	16.0161955070022	49	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTGTTCTCCCTGC	6108	False	NA	NA	False	NA	NA	NA	120562005	120548665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182_120561674_120561892
tx.11615	chr2	-	11172	16	FSM	ENSMUSG00000090100.8	ENSMUST00000085840.11	11152	16	-20	0	-3	0	multi-exon	FALSE	canonical	3	12	junction_14	10.6048207067457	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGCTATTTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	120680919	120563296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
tx.11616	chr2	-	6260	16	NIC	ENSMUSG00000090100.8	novel	11152	16	NA	NA	-3	3023	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	13.9612161202223	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCATTCTATCACTTTC	NA	False	NA	NA	False	NA	NA	NA	120680919	120573128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120667645_120667742_120680536
tx.11617	chr2	-	3937	14	ISM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-33	11986	-4	869	5prime_fragment	FALSE	canonical	3	11	junction_13	9.62676249904493	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTAAGTGTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	120680920	120575282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
tx.11618	chr2	-	7719	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	46	3	23	-3	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTTCTCATGTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	120801150	120690752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
tx.11619	chr2	+	1528	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	29	12	0	-12	multi-exon	FALSE	canonical	3	138	junction_6	15.0811140172071	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGTGTCATTTAATGT	NA	False	NA	NA	False	NA	NA	NA	120838912	120847373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
tx.1162	chr1	-	5607	25	ISM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	10880	0	-7463	0	3prime_fragment	FALSE	canonical	3	54	junction_22	31.5289769718094	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	7542	False	NA	NA	False	NA	NA	NA	183140014	183107681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604
tx.11620	chr2	-	2046	2	NNC	ENSMUSG00000074890.5	novel	2047	2	NA	NA	-15	-918	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGGGTGAATTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	120971149	120968996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_120969218_120969324
tx.11621	chr2	+	2548	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	-71	0	-1	0	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120970907	120987159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
tx.11622	chr2	+	2601	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120970911	120987159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
tx.11623	chr2	-	2411	2	FSM	ENSMUSG00000050619.15	ENSMUST00000146243.2	2894	2	-13	496	-13	-496	multi-exon	FALSE	canonical	2	2	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCATTATCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	121001619	120996117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120997200_121000290
tx.11624	chr2	-	2610	3	ISM	ENSMUSG00000050619.15	ENSMUST00000163766.8	3611	6	-11	4945	-11	-500	5prime_fragment	FALSE	canonical	3	33	junction_1	2	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTTTTCATTATCTT	NA	False	NA	NA	False	NA	NA	NA	121001617	120996121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_120997200_120999679_120999885_121000290
tx.11625	chr2	+	4223	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	-18	1	-12	0	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	NA	False	NA	NA	NA	121001677	121029250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
tx.11626	chr2	+	4220	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	29	1	-12	0	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	NA	False	NA	NA	NA	121001677	121029250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
tx.11627	chr2	+	4168	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	61	junction_3	57.8950761615355	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACGTCTGGCCTTGTAGA	NA	False	NA	NA	False	NA	NA	NA	121001675	121029247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
tx.11628	chr2	+	3514	17	NIC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	0	-634	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	56.955266163455	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTTTGTTTGCTGTAC	NA	False	NA	NA	False	NA	NA	NA	121001695	121028616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
tx.11629	chr2	-	4593	17	ISM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	34650	3413	-751	0	3prime_fragment	FALSE	canonical	3	115	junction_12	25.0745762676062	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	NA	False	NA	NA	False	NA	NA	NA	121067238	121028731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053
tx.1163	chr1	-	6334	28	FSM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	-4	0	-4	0	multi-exon	FALSE	canonical	3	46	junction_27	39.9558741524534	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4039	False	NA	NA	False	NA	NA	NA	183150898	183107681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
tx.11630	chr2	-	6205	28	FSM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	3	3413	3	0	multi-exon	TRUE	canonical	3	115	junction_12	23.0142199734784	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8075	False	NA	NA	False	NA	NA	NA	121101885	121028731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
tx.11631	chr2	+	8478	3	ISM	ENSMUSG00000027254.14	ENSMUST00000110639.8	10145	6	5165	4	5156	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	3.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGGTGTGGTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	121131099	121139915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_121137854_121137995_121138217_121138412
tx.11632	chr2	-	5566	31	NIC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_6	18.7459328922303	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	NA	False	NA	NA	NA	121185816	121141041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
tx.11633	chr2	-	5716	32	NIC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	19.1421648876737	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	NA	False	NA	NA	NA	121185816	121141041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
tx.11634	chr2	-	6143	31	NIC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	-458	0	combination_of_known_junctions	TRUE	canonical	3	48	junction_7	18.7846272846235	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	NA	False	NA	NA	NA	121181956	121141041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397
tx.11635	chr2	+	1518	10	FSM	ENSMUSG00000000308.15	ENSMUST00000078222.9	1518	10	-1	1	-1	0	multi-exon	FALSE	canonical	3	125	junction_1	32.5602954456217	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCTGTGTTATTTCTA	800	False	NA	NA	False	NA	NA	NA	121188255	121194217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121188341_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
tx.11636	chr2	+	1610	9	FSM	ENSMUSG00000000308.15	ENSMUST00000000317.13	1620	9	10	0	10	0	multi-exon	FALSE	canonical	3	189	junction_3	17.8881070826401	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	1645	False	NA	NA	False	NA	NA	NA	121189100	121194218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
tx.11637	chr2	+	1907	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	156	707	48	-707	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	3652	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	NA	False	NA	NA	NA	121244411	121268461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
tx.11638	chr2	-	1684	11	FSM	ENSMUSG00000027246.13	ENSMUST00000116432.2	1674	11	-9	-1	-9	1	multi-exon	FALSE	canonical	3	70	junction_5	7.95235814082842	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGCGATCATTAGCC	NA	False	NA	NA	False	NA	NA	NA	121273091	121269506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
tx.11639	chr2	+	2462	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	174	420	1	-5	multi-exon	FALSE	canonical	3	5931	junction_1	722	1024	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTAGAATCTGAGCATTC	NA	False	NA	NA	False	NA	NA	NA	121279849	121283481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121279923_121280455_121280565_121281201
tx.1164	chr1	+	2389	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	-5	0	-5	0	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	NA	False	NA	NA	NA	183170319	183191020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
tx.11640	chr2	+	3106	2	FSM	ENSMUSG00000074884.13	ENSMUST00000134412.2	3105	2	1	-2	1	2	multi-exon	FALSE	canonical	3	5931	junction_1	0	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGCATTCTGGGTAG	NA	False	NA	NA	False	NA	NA	NA	121279849	121283488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121279923_121280455
tx.11641	chr2	+	577	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	145	239	-16	-3	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	687	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGGCTCTTATATTG	NA	False	NA	NA	False	NA	NA	NA	121287588	121288914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
tx.11642	chr2	-	2597	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	40	725	40	-725	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	248	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATGCAGTTCTTGAAGT	9235	False	NA	NA	False	NA	NA	NA	121304508	121291440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
tx.11643	chr2	-	3357	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	8	833	8	-833	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	197	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTTATTTGGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	121337138	121323224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
tx.11644	chr2	+	3555	14	NNC	ENSMUSG00000027242.15	novel	2789	13	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.000197237362	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTTTGAGTAAT	NA	False	NA	NA	False	NA	NA	NA	121337242	121375338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374114_121374761
tx.11645	chr2	+	4257	13	FSM	ENSMUSG00000027242.15	ENSMUST00000028676.12	2789	13	-15	-1453	-15	-3	multi-exon	FALSE	canonical	3	31	junction_10	8.00347146902865	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTTTGAGTAAT	NA	False	NA	NA	False	NA	NA	NA	121337188	121375338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781
tx.11646	chr2	+	3563	14	NNC	ENSMUSG00000027242.15	novel	2341	13	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.7213155719746	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	121340309	121375341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374114_121374761
tx.11647	chr2	-	4738	13	ISM	ENSMUSG00000027238.18	ENSMUST00000121219.8	2262	14	195579	-2556	-5332	-2	3prime_fragment	FALSE	canonical	2	7	junction_6	7.6061926524817	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAATGGGTCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	121422246	121376011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138
tx.11648	chr2	+	3925	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	-22	312	-22	1	multi-exon	FALSE	canonical	3	136	junction_8	32.2490309931942	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTTTTGATTATATA	NA	False	NA	NA	False	NA	NA	NA	121697428	121766389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
tx.11649	chr2	+	3757	9	FSM	ENSMUSG00000060227.16	ENSMUST00000110586.10	4032	9	-22	297	-22	1	multi-exon	FALSE	canonical	3	90	junction_8	46.1246612453685	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTTTTGATTATATA	NA	False	NA	NA	False	NA	NA	NA	121697428	121766389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958
tx.1165	chr1	+	2319	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	14.0996453856117	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	183170319	183191018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
tx.11650	chr2	+	2560	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-22	4917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	76.5927179596366	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTTAAAAAATTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	121697428	121771618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958_121765019_121771444
tx.11651	chr2	+	2729	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-23	4917	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	68.2422156732913	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTTAAAAAATTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	121697427	121771618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765019_121771444
tx.11652	chr2	+	4399	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	139.368907248684	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCTTTCTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	121786518	121843096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827927_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
tx.11653	chr2	+	6730	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	16	1678	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	135.240613976124	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGATGACATTTT	NA	False	NA	NA	False	NA	NA	NA	121786907	121845801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
tx.11654	chr2	+	6274	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	456	-1677	-3	1677	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	390	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTTTGATGACATTT	NA	False	NA	NA	False	NA	NA	NA	121786937	121845800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
tx.11655	chr2	+	2417	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	26	2970	26	-2970	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	560	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGCAGGTACAGGCGT	NA	False	NA	NA	False	NA	NA	NA	121859052	121884109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
tx.11656	chr2	-	7393	40	FSM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	9	269	-2	-269	multi-exon	FALSE	canonical	0	0	junction_26	28.2050349648808	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTTGAAAAGCCCAG	6988	False	NA	NA	False	NA	NA	NA	121948858	121884269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
tx.11657	chr2	-	2828	8	NIC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60117	-5	intron_retention	FALSE	canonical	3	83	junction_7	12.4670995595837	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTCCGTGTTGCCAG	NA	False	NA	NA	False	NA	NA	NA	121956553	121950593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
tx.11658	chr2	-	1392	10	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60367	5	60367	-5	3prime_fragment	FALSE	canonical	3	83	junction_9	15.8449275288675	40	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTCCGTGTTGCCAG	NA	False	NA	NA	False	NA	NA	NA	121956303	121950593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
tx.11659	chr2	-	1495	11	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60036	5	60036	-5	3prime_fragment	FALSE	canonical	3	37	junction_10	25.8797217913949	28	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTCCGTGTTGCCAG	NA	False	NA	NA	False	NA	NA	NA	121956634	121950593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956581
tx.1166	chr1	+	3382	3	NIC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	15262	-3	intron_retention	FALSE	canonical	3	59	junction_2	10	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTAGTAGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	183185586	183191017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_183187850_183189427_183189583_183190053
tx.11660	chr2	+	847	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	-1	14	-1	-14	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAACTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121978165	121983550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
tx.11661	chr2	-	2819	2	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	0	56381	0	-56381	5prime_fragment	FALSE	canonical	3	24	junction_1	0	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	122016670	122006969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_122009730_122016611
tx.11662	chr2	+	2116	7	FSM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	-7	6	-7	-6	multi-exon	FALSE	canonical	3	14	junction_3	42.3910367884533	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	1938	False	NA	NA	False	NA	NA	NA	122016745	122036872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_122016834_122016944_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
tx.11663	chr2	+	1905	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	1947	False	NA	NA	False	NA	NA	NA	122016754	122036872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
tx.11664	chr2	+	1967	6	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	38.5725290848293	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	1947	False	NA	NA	False	NA	NA	NA	122016754	122036872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_122016834_122016944_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
tx.11665	chr2	+	1995	5	FSM	ENSMUSG00000027229.6	ENSMUST00000149861.2	448	5	-111	-1436	91	0	multi-exon	FALSE	canonical	3	28	junction_1	43.0486643230658	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	2036	False	NA	NA	False	NA	NA	NA	122016843	122036878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
tx.11666	chr2	+	2135	6	ISM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	92	-1	92	1	3prime_fragment	FALSE	canonical	3	14	junction_2	46.343931641586	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTCTCAAAGTGATT	2037	False	NA	NA	False	NA	NA	NA	122016844	122036879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
tx.11667	chr2	+	1908	4	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	-86	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	28.5228952870419	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	2061	False	NA	NA	False	NA	NA	NA	122016868	122036878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_122017027_122023712_122023787_122028866_122028956_122035291
tx.11668	chr2	+	2294	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	57	1	57	-1	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	127	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTATGTGGTTTGTGCC	NA	False	NA	NA	False	NA	NA	NA	122065286	122095820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
tx.11669	chr2	-	1784	6	FSM	ENSMUSG00000033256.15	ENSMUST00000110531.9	1557	6	-229	2	-10	-2	multi-exon	FALSE	canonical	3	69	junction_2	30.854497241083	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTCCGAGCATCCACT	NA	False	NA	NA	False	NA	NA	NA	122199628	122179375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122199127
tx.1167	chr1	+	2667	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	49	76	49	-76	multi-exon	FALSE	canonical	3	8	junction_1	4.08248290463863	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTTGGTGTGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	183766626	183807757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
tx.11670	chr2	-	2353	9	FSM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	31	5	31	-5	multi-exon	FALSE	canonical	2	6	junction_3	2.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGAGTTTGATTTCTG	NA	False	NA	NA	False	NA	NA	NA	122441753	122424952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
tx.11671	chr2	-	2289	10	NNC	ENSMUSG00000027199.15	novel	2389	9	NA	NA	23	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.31477507532169	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGAGTTTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	122441761	122424953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_122425454_122425524_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
tx.11672	chr2	+	2348	8	FSM	ENSMUSG00000118663.1	ENSMUST00000239506.1	2347	8	-31	30	-31	3	multi-exon	FALSE	canonical	3	8	junction_2	2.6954231805876	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTAGTTTGCAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	122461088	122474720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122471036_122471230_122472613_122472745_122473758_122473885_122474529
tx.11673	chr2	+	685	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	1	106	1	0	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGTGCAAGAGATA	NA	False	NA	NA	False	NA	NA	NA	122479770	122483005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
tx.11674	chr2	-	5648	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	-201	11	-177	-11	multi-exon	FALSE	canonical	2	11	junction_5	3.62476052848859	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCCCTAATTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	122544760	122523163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
tx.11675	chr2	+	2089	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	20	1375	4	1	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTGGCGATTCTTTTC	8289	False	NA	NA	False	NA	NA	NA	122580442	122590020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
tx.11676	chr2	+	1683	9	FSM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	-18	289	-18	-289	multi-exon	TRUE	canonical	2	7	junction_6	24.0624188310319	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTAACACTTAATTACT	NA	False	NA	NA	False	NA	NA	NA	124910025	124930308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
tx.11677	chr2	-	2934	15	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	223.92901572068	113	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	124965543	124929660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
tx.11678	chr2	-	2957	15	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	185.119500841583	426	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	124965545	124929660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
tx.11679	chr2	-	3008	16	NIC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	215.150634569261	125	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	124965545	124929660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
tx.1168	chr1	-	1273	8	FSM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	34	610	0	0	multi-exon	FALSE	canonical	3	760	junction_6	70.0437181264644	429	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCGCTATTACGTTTTT	NA	False	NA	NA	False	NA	NA	NA	184578044	184545874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
tx.11680	chr2	-	2888	14	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	192.845739620923	320	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	124965548	124929660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
tx.11681	chr2	+	959	7	FSM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	45	16	45	-16	multi-exon	TRUE	canonical	3	52	junction_1	864.28364685572	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	NA	False	NA	NA	NA	125089154	125099652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_125089322_125089683_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
tx.11682	chr2	+	870	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	204	876	204	-16	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	531	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	NA	False	NA	NA	NA	125089605	125099652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
tx.11683	chr2	-	5768	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_1	8.19933417618679	31	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	NA	False	NA	NA	NA	125467036	125405007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
tx.11684	chr2	-	5766	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	9.53097613955882	17	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	NA	False	NA	NA	NA	125467037	125405007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_125406315_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
tx.11685	chr2	-	6702	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	86	9	86	-9	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGAATTTCTGTGTTC	390	False	NA	NA	False	NA	NA	NA	125624704	125578914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
tx.11686	chr2	-	6522	17	NIC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	85	-11	combination_of_known_splicesites	FALSE	canonical	3	5	junction_16	17.9041501822901	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAGAGAATTTCTGTGT	389	False	NA	NA	False	NA	NA	NA	125624705	125578916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125624518
tx.11687	chr2	-	3037	11	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	296.558324786205	59	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTGTGTGCATGTGAT	NA	False	NA	NA	False	NA	NA	NA	125700918	125672222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125691649_125691774_125700855
tx.11688	chr2	-	3234	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	137	-1298	-6	0	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	768	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTGTGTGCATGTGA	NA	False	NA	NA	False	NA	NA	NA	125700922	125672223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
tx.11689	chr2	-	3257	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	135	0	-8	0	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	448	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTGTGTGCATGTGA	NA	False	NA	NA	False	NA	NA	NA	125700924	125672223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
tx.1169	chr1	-	1069	2	FSM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	142	1824	142	-1824	multi-exon	FALSE	canonical	3	22	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAAGACTATGATGC	NA	False	NA	NA	False	NA	NA	NA	184615273	184605946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_184606625_184614882
tx.11690	chr2	+	1793	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	135	0	-1	0	multi-exon	FALSE	canonical	3	86	junction_4	15.4040238449986	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTGCTCTTGAATG	NA	False	NA	NA	False	NA	NA	NA	125708161	125825507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
tx.11691	chr2	+	6009	4	ISM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	19	12	19	-12	intron_retention	FALSE	canonical	3	175	junction_1	16.739839372653	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTCACTTATACTCGC	7298	False	NA	NA	False	NA	NA	NA	125994079	126007184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689
tx.11692	chr2	+	1177	4	NIC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	74.5534856477028	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCCTTACCTTTCGACT	7303	False	NA	NA	False	NA	NA	NA	125994084	126007199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_125994135_125996465_125996781_126001689_126001949_126006646
tx.11693	chr2	+	1322	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	21	-1	21	1	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7300	False	NA	NA	False	NA	NA	NA	125994081	126007197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
tx.11694	chr2	+	1633	5	NNC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	73	1	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	62.1867148191637	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7352	False	NA	NA	False	NA	NA	NA	125994133	126007197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_125994498_125996465_125996781_126000329_126000474_126001689_126001949_126006646
tx.11695	chr2	+	3625	4	FSM	ENSMUSG00000023330.13	ENSMUST00000110437.4	1276	4	-2351	2	49	1	multi-exon	FALSE	canonical	3	183	junction_3	13.6381816969859	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7328	False	NA	NA	False	NA	NA	NA	125994109	126007197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_125996781_126000329_126000474_126001689_126001949_126006646
tx.11696	chr2	+	2335	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	583	0	583	0	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGAGGCTTCGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	126394909	126430163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
tx.11697	chr2	-	2665	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	18	1470	-6	1	multi-exon	FALSE	canonical	3	222	junction_1	62.4468524026632	361	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	NA	False	NA	NA	NA	126517470	126470831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
tx.11698	chr2	-	1399	8	FSM	ENSMUSG00000027361.16	ENSMUST00000103226.10	1338	8	-57	-4	1	4	multi-exon	FALSE	canonical	3	353	junction_7	27.2074419591255	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAATGAGTGCAGAATTT	NA	False	NA	NA	False	NA	NA	NA	126517463	126480936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
tx.11699	chr2	+	4141	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	17	-13	0	13	multi-exon	TRUE	canonical	3	323	junction_9	42.2163738639668	589	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACATGTTTTGTCTTCTT	3593	False	NA	NA	False	NA	NA	NA	126549279	126601230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
tx.117	chr1	-	2850	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-1	1280	-1	-3	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	1786	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTCCTTTTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	30988837	30980663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
tx.1170	chr1	-	4600	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	-384	5	-384	-5	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGCTGTGAATCACCTG	2872	False	NA	NA	False	NA	NA	NA	184732151	184628990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
tx.11700	chr2	-	7112	39	FSM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	-5	0	-5	0	multi-exon	FALSE	canonical	3	201	junction_33	52.8048791605273	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	NA	False	NA	NA	NA	126718155	126633484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
tx.11701	chr2	-	3560	16	NIC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	201	-1909	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	7.10742960257473	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTTAGTAACATCTGC	8480	False	NA	NA	False	NA	NA	NA	126774954	126734219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755219_126755274_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
tx.11702	chr2	-	5404	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	201	11	201	-11	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAAATGAATTTGT	8480	False	NA	NA	False	NA	NA	NA	126774954	126732321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
tx.11703	chr2	+	6124	21	FSM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	-18	-1506	-5	1506	multi-exon	TRUE	canonical	3	34	junction_11	7.58468852359805	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	126850631	126911335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
tx.11704	chr2	+	1027	6	NIC	ENSMUSG00000001999.16	novel	657	6	NA	NA	0	417	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	66.545022353291	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATATTGTGAGTCGA	2237	False	NA	NA	False	NA	NA	NA	126912612	126932686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126932163
tx.11705	chr2	+	2334	5	FSM	ENSMUSG00000001999.16	ENSMUST00000142861.2	1460	5	5	-879	3	879	multi-exon	FALSE	canonical	3	72	junction_1	50.701947694344	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCGTCCTGGGATTCAT	2214	False	NA	NA	False	NA	NA	NA	126912589	126930669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764
tx.11706	chr2	+	1139	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	21	0	-5	0	multi-exon	FALSE	canonical	3	72	junction_1	50.5988626152721	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	2232	False	NA	NA	False	NA	NA	NA	126912607	126939004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
tx.11707	chr2	-	2660	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	18	17	18	1	multi-exon	TRUE	canonical	3	394	junction_9	30.9044738701424	440	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	NA	False	NA	NA	NA	126975856	126945745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
tx.11708	chr2	-	3693	2	FSM	ENSMUSG00000074825.5	ENSMUST00000110386.2	1898	2	-151	-1644	-15	7	multi-exon	FALSE	canonical	3	11	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATCTGTTCACTAACA	NA	False	NA	NA	False	NA	NA	NA	126985377	126980684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_126984135_126985134
tx.11709	chr2	+	6755	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	-11	1	2	-1	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	722	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTCCTTAACAGTGATA	NA	False	NA	NA	False	NA	NA	NA	127050307	127082370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
tx.1171	chr1	-	4556	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-398	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	14.6964675745415	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGCTGTGAATCACCTGT	8	True	NA	NA	False	NA	NA	NA	184732165	184628989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651893_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
tx.11710	chr2	-	1416	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	56	1603	56	79	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGATCTTTATAGAAATA	NA	False	NA	NA	False	NA	NA	NA	127089680	127084460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
tx.11711	chr2	+	4428	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	40	343	-21	-343	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTAGTCTTCCTGTGCC	2374	False	NA	NA	False	NA	NA	NA	127089867	127102684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
tx.11712	chr2	+	4104	3	FSM	ENSMUSG00000034850.16	ENSMUST00000174288.2	842	3	-21	-3241	-17	-345	multi-exon	FALSE	canonical	2	7	junction_1	67.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTAGTCTTCCTGTG	2378	False	NA	NA	False	NA	NA	NA	127089871	127102682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127090005_127097924_127098090_127098876
tx.11713	chr2	+	4850	3	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	25	-343	intron_retention	FALSE	canonical	3	85	junction_1	28.5	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTAGTCTTCCTGTGCC	2359	False	NA	NA	False	NA	NA	NA	127089852	127102684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_127090730_127097924_127098090_127098876
tx.11714	chr2	+	3121	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	-4	-1	-4	1	multi-exon	FALSE	canonical	3	326	junction_5	27.592515992122	815	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGAGTGTTCATTTCTG	NA	False	NA	NA	False	NA	NA	NA	127112144	127140853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
tx.11715	chr2	+	1711	4	FSM	ENSMUSG00000027368.7	ENSMUST00000028846.7	1617	4	-93	-1	-93	1	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCTGGTCTCAAG	NA	False	NA	NA	False	NA	NA	NA	127177985	127180297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127178558_127178696_127178819_127179168_127179389_127179500
tx.11716	chr2	+	2659	22	FSM	ENSMUSG00000046338.5	ENSMUST00000062211.4	2628	22	-31	0	-31	0	multi-exon	FALSE	canonical	3	16	junction_1	53.4925768898164	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4970	False	NA	NA	False	NA	NA	NA	127267087	127278012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
tx.11717	chr2	+	2663	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-34	-2	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_1	61.0786266991636	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4967	False	NA	NA	False	NA	NA	NA	127267084	127278010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
tx.11718	chr2	-	1226	8	FSM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	-15	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	10.321366781822	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	127286485	127278134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793_127284045_127286336
tx.11719	chr2	-	2898	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	30	-1632	30	0	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTCTCTCCAGCTTC	9658	False	NA	NA	False	NA	NA	NA	127324389	127298417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
tx.1172	chr1	-	3313	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-380	-1291	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	12.8795323261824	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTAGCATGAAGTTT	-8	True	NA	NA	False	NA	NA	NA	184732147	184630276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_184631076_184633005_184633051_184637599_184637855_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
tx.11720	chr2	-	2865	5	FSM	ENSMUSG00000034800.16	ENSMUST00000077422.12	2765	5	1	-101	1	94	multi-exon	FALSE	canonical	3	15	junction_4	7.11951543294907	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCTATTTCTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	127426596	127417358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426549
tx.11721	chr2	-	3675	6	NNC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	2	-289	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	12.4963994814506	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGAGTCTTCCCTTTT	NA	False	NA	NA	False	NA	NA	NA	127426595	127416870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127424102_127426549
tx.11722	chr2	+	1460	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	180	2841	-17	133	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	857	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTATATAGCTGTGTG	4147	False	NA	NA	False	NA	NA	NA	127429321	127445908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
tx.11723	chr2	+	3181	11	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	-7	129	intron_retention	FALSE	canonical	3	1110	junction_4	153.534654068715	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	4157	False	NA	NA	False	NA	NA	NA	127429331	127445904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
tx.11724	chr2	-	2341	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	437	0	-39	0	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTCACTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	127498178	127475145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
tx.11725	chr2	-	1983	4	FSM	ENSMUSG00000027377.3	ENSMUST00000028856.3	2006	4	19	4	19	-4	multi-exon	FALSE	canonical	3	53	junction_2	4.54606056566195	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTGGAGTCTATCGC	NA	False	NA	NA	False	NA	NA	NA	127571833	127546309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127547844_127550756_127550880_127554188_127554357_127571675
tx.11726	chr2	-	2295	20	FSM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	-37	2	6	0	multi-exon	FALSE	canonical	3	19	junction_11	16.3928570350886	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTATATCTAAATTTT	2797	False	NA	NA	False	NA	NA	NA	127630811	127582653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
tx.11727	chr2	-	2291	20	FSM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	7	-2	7	0	multi-exon	FALSE	canonical	3	41	junction_11	13.7437973922422	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTATATCTAAATTTT	2798	False	NA	NA	False	NA	NA	NA	127630810	127582653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
tx.11728	chr2	-	454	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	-2	348	-2	-348	multi-exon	FALSE	canonical	3	537	junction_1	0	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCTCCTCACAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	127634410	127633655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127633753_127634053
tx.11729	chr2	-	3415	25	FSM	ENSMUSG00000027379.15	ENSMUST00020183811.1	3418	25	-2	5	-2	4	multi-exon	FALSE	canonical	0	0	junction_18	145.15221297161	667	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTAGTTGTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	127673781	127643040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
tx.1173	chr1	+	4475	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	1	2576	1	-2	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTAATGCAGATGCTTTA	NA	False	NA	NA	False	NA	NA	NA	184936314	185016380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
tx.11730	chr2	-	3377	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	178.998836122846	52	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTAGTTGTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	127673785	127643040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
tx.11731	chr2	-	3374	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	0	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	178.998836122846	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTAGTTGTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	127673779	127643040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
tx.11732	chr2	-	3419	25	FSM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	3	-4	-3	4	multi-exon	FALSE	canonical	0	0	junction_18	145.15221297161	391	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTAGTTGTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	127673782	127643040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
tx.11733	chr2	+	2794	19	NIC	ENSMUSG00000027380.11	novel	531	6	NA	NA	-99	8	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	2.77999911182151	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGCGGAAATGAATTTC	NA	False	NA	NA	False	NA	NA	NA	127680696	127965801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_127680903_127691112_127691210_127709202_127709287_127713181_127713269_127714029_127714129_127719663_127719779_127720676_127720764_127722345_127722419_127726325_127726459_127753349_127753385_127814451_127814569_127820592_127820747_127851996_127852087_127876732_127876843_127886263_127886376_127917766_127917855_127928278_127928350_127947596_127947699_127964867
tx.11734	chr2	+	4943	5	NIC	ENSMUSG00000027381.17	novel	974	4	NA	NA	-51	0	intron_retention	FALSE	canonical	3	24	junction_2	4.32290411644765	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGTTCGATGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	127969443	128004467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_127969733_127970539_127970677_127970844_127970935_127989004_127989115_128000150
tx.11735	chr2	+	5111	4	NIC	ENSMUSG00000027381.17	novel	974	4	NA	NA	-51	0	intron_retention	FALSE	canonical	3	31	junction_3	2.16024689946929	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGTTCGATGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	127969443	128004467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_127969733_127970539_127970935_127989004_127989115_128000150
tx.11736	chr2	+	4372	2	ISM	ENSMUSG00000027381.17	ENSMUST00000110341.9	5036	4	21103	-2	19011	2	3prime_fragment	FALSE	canonical	3	31	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTCGATGTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	127989061	128004469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_127989115_128000150
tx.11737	chr2	-	4730	21	ISM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	44701	597	-12655	-597	3prime_fragment	FALSE	canonical	3	346	junction_13	35.498274605958	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCCAGATCTTAATTCC	NA	False	NA	NA	False	NA	NA	NA	128484610	128452620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365
tx.11738	chr2	-	8101	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	5	-599	combination_of_known_splicesites	FALSE	canonical	2	6	junction_46	67.4057663304377	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTGCCAGATCTTAATT	NA	False	NA	NA	False	NA	NA	NA	128529306	128452622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128529072
tx.11739	chr2	-	6336	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	6	2600	6	-2600	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	570	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	NA	False	NA	NA	NA	128529305	128454623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
tx.1174	chr1	+	4476	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	1	-59	1	59	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTATTGTTACTGGTT	NA	False	NA	NA	False	NA	NA	NA	184936314	185016441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
tx.11740	chr2	+	4530	19	FSM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	-114	-114	-114	114	multi-exon	TRUE	canonical	2	5	junction_3	3.05302925867424	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCAGGTTTGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	128540761	128644928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
tx.11741	chr2	+	4613	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	8	-2521	8	-1	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	NA	False	NA	NA	NA	128660230	128696180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
tx.11742	chr2	-	1553	9	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_6	71.0922595997623	34	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	NA	False	NA	NA	NA	128785940	128768189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777243_128777467_128781762_128781857_128785767
tx.11743	chr2	-	1566	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	57	1	57	-1	multi-exon	FALSE	canonical	2	159	junction_3	33.6115214621415	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	NA	False	NA	NA	NA	128785940	128768188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
tx.11744	chr2	+	2025	7	FSM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	7	2535	7	-2535	multi-exon	FALSE	canonical	3	70	junction_4	11.1118055338555	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAATCTTACTTTACTT	NA	False	NA	NA	False	NA	NA	NA	128907868	128935668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
tx.11745	chr2	+	2339	6	ISM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	-2	6033	-2	469	5prime_fragment	FALSE	canonical	3	70	junction_4	9.64157663455516	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTGAATGCTAGGCCC	NA	False	NA	NA	False	NA	NA	NA	128907859	128932170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913
tx.11746	chr2	+	3841	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	95.2666772587266	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	128942910	128968515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959954_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
tx.11747	chr2	+	3987	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	12	-1	12	1	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	128942926	128968515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
tx.11748	chr2	+	4551	4	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	807	1	intron_retention	FALSE	canonical	3	289	junction_2	22.3954360429878	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	128958398	128968515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_128961117_128964989_128965187_128965630_128965885_128967133
tx.11749	chr2	+	1200	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	103	22	-1	-22	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTTGGAGACCTCC	3928	False	NA	NA	False	NA	NA	NA	128971722	128976032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
tx.1175	chr1	-	3528	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	16	1927	16	-1084	multi-exon	TRUE	canonical	3	288	junction_20	32.2887284275964	574	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGATGGTGAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	185061577	185018849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
tx.11750	chr2	+	3314	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	1	1	1	-1	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	413	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	129040684	129053535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
tx.11751	chr2	+	4080	6	ISM	ENSMUSG00000027397.15	ENSMUST00000110315.2	3219	10	5123	-6	-1887	-1	3prime_fragment	FALSE	canonical	3	303	junction_1	98.2677973702474	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	129046352	129053535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
tx.11752	chr2	+	3991	5	NIC	ENSMUSG00000027397.15	novel	3219	10	NA	NA	-675	-1	intron_retention	FALSE	canonical	3	499	junction_4	37.3965239026303	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	129047564	129053535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
tx.11753	chr2	+	1657	4	ISM	ENSMUSG00000027397.15	ENSMUST00000110315.2	3219	10	8773	-6	723	-1	3prime_fragment	FALSE	canonical	3	499	junction_3	37.1573231902766	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	129050002	129053535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_129050460_129050960_129051144_129051791_129051877_129052603
tx.11754	chr2	-	3246	2	NNC	ENSMUSG00000087528.2	novel	2070	3	NA	NA	-196	1300	intron_retention	FALSE	canonical	3	7	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCAAGGTGTTCATTAT	NA	False	NA	NA	False	NA	NA	NA	129068554	129064811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_129067831_129068327
tx.11755	chr2	-	2648	6	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	11374	0	11374	0	3prime_fragment	TRUE	canonical	3	256	junction_2	37.2204245005346	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	129127758	129110129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776
tx.11756	chr2	-	3116	9	FSM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	21	0	21	0	multi-exon	FALSE	canonical	3	256	junction_2	30.0416377715996	433	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	129139111	129110129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
tx.11757	chr2	-	3118	9	NNC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	canonical	3	74	junction_2	84.1037305950218	139	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	129139116	129110129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_129111184_129112494_129112679_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
tx.11758	chr2	+	3652	9	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	29.9934888767546	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	129434743	129474148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_129434813_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
tx.11759	chr2	+	4159	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	-177	0	114	0	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	129434947	129474148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
tx.1176	chr1	-	2568	18	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	16	9850	16	462	5prime_fragment	FALSE	canonical	3	288	junction_15	34.0313309744017	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGATTTTTGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	185061577	185026772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
tx.11760	chr2	+	3161	6	FSM	ENSMUSG00000037902.19	ENSMUST00000160276.2	876	6	-241	-2044	167	0	multi-exon	FALSE	canonical	3	15	junction_2	39.9729908813439	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	129435291	129474148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
tx.11761	chr2	+	5501	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	-56	0	-56	0	multi-exon	FALSE	canonical	3	29	junction_2	55	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGTGATTTTTA	6175	False	NA	NA	False	NA	NA	NA	129642380	129674207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_129642767_129643323_129643925_129669693
tx.11762	chr2	+	6247	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-56	-3309	-56	-4	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGTTTTGTGATT	6175	False	NA	NA	False	NA	NA	NA	129642380	129674203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
tx.11763	chr2	+	5811	3	ISM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	941	-3313	941	0	3prime_fragment	FALSE	canonical	3	112	junction_2	10	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGTGATTTTTA	7172	False	NA	NA	False	NA	NA	NA	129643377	129674207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_129643925_129652407_129653158_129669693
tx.11764	chr2	+	2655	13	FSM	ENSMUSG00000027401.10	ENSMUST00000110299.3	4135	13	-27	1507	-27	-1507	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACCAGTTCCAACCGGC	NA	False	NA	NA	False	NA	NA	NA	129854241	129890812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_129854330_129865608_129865783_129866264_129866505_129867177_129867297_129868604_129868734_129871544_129871723_129871820_129871957_129879392_129879497_129880282_129880529_129883676_129883986_129886422_129886581_129889607_129889742_129890172
tx.11765	chr2	-	1116	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	37	8	-32	-8	multi-exon	TRUE	canonical	3	3295	junction_4	264.518850409989	1619	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTGATATATTCATTTG	NA	False	NA	NA	False	NA	NA	NA	130021286	130013562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
tx.11766	chr2	-	1239	8	FSM	ENSMUSG00000027404.17	ENSMUST00000147570.3	1133	8	37	-143	-32	-9	multi-exon	FALSE	canonical	3	49	junction_6	1649.031750539	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTGATATATTCATTT	NA	False	NA	NA	False	NA	NA	NA	130021286	130013563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018548_130018673_130018934_130019087_130021153
tx.11767	chr2	+	1856	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	16	5	0	1	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	1028	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
tx.11768	chr2	-	1507	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	106	3	-7	1	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	538	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	130126361	130121231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
tx.11769	chr2	-	2378	14	FSM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	-12	0	-12	0	multi-exon	FALSE	canonical	3	131	junction_8	18.681383322448	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTTGAGTTCCTATTC	NA	False	NA	NA	False	NA	NA	NA	130239506	130232694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
tx.1177	chr1	+	2213	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	4	-991	3	-5	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTAATTGCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	185064372	185089969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
tx.11770	chr2	-	2798	7	NNC	ENSMUSG00000037773.15	novel	3496	7	NA	NA	11	5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	11.6045967903528	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGTTTGTTTTTA	8036	False	NA	NA	False	NA	NA	NA	130266219	130260139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_130261254_130261549_130261629_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
tx.11771	chr2	-	2987	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	-28	537	4	5	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGTTTGTTTTTA	8029	False	NA	NA	False	NA	NA	NA	130266226	130260139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
tx.11772	chr2	-	3121	6	FSM	ENSMUSG00000037773.15	ENSMUST00000153663.8	3032	6	-46	-43	-2	19	multi-exon	FALSE	canonical	3	20	junction_5	6.96850055607374	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTCCTTGCAGAAATG	8023	False	NA	NA	False	NA	NA	NA	130266232	130260101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264625_130264732_130264813_130265331
tx.11773	chr2	+	2733	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_14	85.518025261509	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	NA	False	NA	NA	NA	130266264	130285652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
tx.11774	chr2	+	2647	24	FSM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	-23	537	3	-2	multi-exon	FALSE	canonical	0	0	junction_15	83.6383654878219	353	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	NA	False	NA	NA	NA	130266261	130285652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
tx.11775	chr2	+	2925	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	4	2396	4	-295	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	278	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTTCAAATATCTTT	NA	False	NA	NA	False	NA	NA	NA	130292201	130395648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
tx.11776	chr2	+	979	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	-2	3301	-2	0	multi-exon	FALSE	canonical	3	506	junction_2	32.273139846559	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	383	False	NA	NA	False	NA	NA	NA	130405659	130407314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
tx.11777	chr2	+	1058	3	FSM	ENSMUSG00000037740.9	ENSMUST00000046149.9	1057	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	543	junction_1	21	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	384	False	NA	NA	False	NA	NA	NA	130405660	130407314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_130405911_130406000_130406352_130406857
tx.11778	chr2	-	2372	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	31	1328	20	-1328	multi-exon	TRUE	canonical	3	59	junction_5	36.0477461153953	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	NA	NA	NA	130471927	130433249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
tx.11779	chr2	-	2528	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	11	-1328	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	142	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	NA	NA	NA	130471936	130433249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
tx.1178	chr1	+	2176	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	19	5	-4	-5	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTAATTGCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	185064364	185089969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
tx.11780	chr2	-	3107	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	92.5	55	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCACAAAGTCTTACTG	NA	False	NA	NA	False	NA	NA	NA	130471932	130455762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_130458626_130470408_130470556_130471835
tx.11781	chr2	-	3149	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	74	138	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCACAAAGTCTTACTGCA	NA	False	NA	NA	False	NA	NA	NA	130471935	130455760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_130458663_130470408_130470556_130471835
tx.11782	chr2	-	2998	2	FSM	ENSMUSG00000079043.4	ENSMUST00000110262.3	3015	2	11	6	11	-6	multi-exon	FALSE	canonical	3	43	junction_1	0	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGATCCACAAAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	130471936	130455765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130458663_130471835
tx.11783	chr2	-	2957	2	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGATCCACAAAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	130471932	130455765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_130458626_130471835
tx.11784	chr2	-	4207	5	FSM	ENSMUSG00000037703.15	ENSMUST00000045761.7	4201	5	-3	-3	-3	0	multi-exon	FALSE	canonical	2	6	junction_3	1.87082869338697	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGGAAAGAGTTTTCA	4014	False	NA	NA	False	NA	NA	NA	130484726	130474758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130477385_130477692_130478548_130478862_130479340_130479804_130479968_130484640
tx.11785	chr2	-	4212	5	NNC	ENSMUSG00000037703.15	novel	4201	5	NA	NA	-73	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	1.92028643696715	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGATGGAAAGAGTTTT	3944	False	NA	NA	False	NA	NA	NA	130484796	130474760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_130477385_130477755_130478548_130478862_130479340_130479804_130479968_130484640
tx.11786	chr2	-	3188	7	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	57	71	57	4	intron_retention	FALSE	canonical	0	0	junction_6	148.454257825994	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTTGTTTGTAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	130506522	130495950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996
tx.11787	chr2	-	1119	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	45	74	45	1	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGTTGTTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	130506534	130495953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
tx.11788	chr2	+	1197	8	FSM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	193	0	-2	0	multi-exon	FALSE	canonical	3	338	junction_5	87.1842992792643	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5428	False	NA	NA	False	NA	NA	NA	130509722	130523534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
tx.11789	chr2	-	3151	21	FSM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	45	0	-5	0	multi-exon	FALSE	canonical	3	76	junction_7	21.856063231973	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	NA	False	NA	NA	NA	130539394	130526032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
tx.1179	chr1	+	3466	3	ISM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	18164	7	18106	-7	3prime_fragment	FALSE	canonical	3	249	junction_2	1.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	185082509	185089967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_185084577_185086153_185086260_185088674
tx.11790	chr2	-	3042	20	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_19	27.8455375458768	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	NA	False	NA	NA	NA	130539393	130526032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
tx.11791	chr2	-	6626	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	2	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	14.9720933822533	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTCTCTGCCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	130682052	130548119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
tx.11792	chr2	-	6652	37	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	16.3424719332446	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCTGTCTCTGCCTGTC	NA	False	NA	NA	False	NA	NA	NA	130682083	130548121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620422_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
tx.11793	chr2	+	6879	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-18	1884	-18	-1884	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCTGTGCCATATAC	NA	False	NA	NA	False	NA	NA	NA	130748396	130870369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
tx.11794	chr2	-	1295	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-46	-8	15	7	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	508	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGCGGGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	131001986	130988236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
tx.11795	chr2	-	4790	7	FSM	ENSMUSG00000027329.10	ENSMUST00000110218.9	2600	7	-2911	721	-2911	574	multi-exon	TRUE	canonical	0	0	junction_5	1.24721912892465	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGCCTGCCTTCTC	5121	False	NA	NA	False	NA	NA	NA	131020032	131012956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_131013711_131013821_131013946_131014123_131014179_131014289_131014330_131014542_131014700_131015115_131015228_131016484
tx.11796	chr2	+	3014	15	FSM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	-10	0	-1	0	multi-exon	FALSE	canonical	3	36	junction_6	17.0899481137484	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGTTTGTTATGCAGA	NA	False	NA	NA	False	NA	NA	NA	131028867	131040417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
tx.11797	chr2	+	1586	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	-65	0	5	0	multi-exon	FALSE	canonical	3	39	junction_2	10	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	NA	False	NA	NA	NA	131052294	131055434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131052602_131053182_131053394_131054366
tx.11798	chr2	+	1375	2	FSM	ENSMUSG00000068264.12	ENSMUST00000134086.2	868	2	5	-512	5	0	multi-exon	FALSE	canonical	3	35	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	NA	False	NA	NA	NA	131052294	131055434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131052602_131054366
tx.11799	chr2	+	2985	8	NNC	ENSMUSG00000037523.14	novel	2959	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	77.1359785293054	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	7257	False	NA	NA	False	NA	NA	NA	131075979	131089942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_131076048_131079346_131079461_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
tx.118	chr1	-	1161	8	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	249	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	107.409572788139	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	8826	False	NA	NA	False	NA	NA	NA	33660974	33492890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33660914
tx.1180	chr1	+	4885	32	FSM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	15	6	1	-6	multi-exon	FALSE	canonical	3	1945	junction_14	331.30791485156	4707	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	NA	False	NA	NA	NA	185095255	185160551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
tx.11800	chr2	+	2874	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	-7	0	-3	0	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	252	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7257	False	NA	NA	False	NA	NA	NA	131075979	131089945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
tx.11801	chr2	+	3056	7	FSM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	1	0	1	0	multi-exon	FALSE	canonical	3	32	junction_1	57.107111835762	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7303	False	NA	NA	False	NA	NA	NA	131076025	131089945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
tx.11802	chr2	+	4015	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	205.341082104873	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	864	False	NA	NA	False	NA	NA	NA	131104414	131141106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_131104736_131115830_131116184_131124511_131124689_131129393_131129518_131135318_131135445_131138192
tx.11803	chr2	+	3838	5	NIC	ENSMUSG00000037514.19	novel	3622	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	217.555165417877	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	864	False	NA	NA	False	NA	NA	NA	131104414	131141106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_131104736_131115830_131116184_131129393_131129518_131135318_131135445_131138192
tx.11804	chr2	+	3713	4	FSM	ENSMUSG00000037514.19_ENSMUSG00000086329.2	ENSMUST00000145904.2	558	4	-300	-2855	1	0	multi-exon	FALSE	canonical	3	31	junction_2	262.90725022757	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	865	False	NA	NA	False	NA	NA	NA	131104415	131141106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131104736_131115830_131116184_131135318_131135445_131138192
tx.11805	chr2	+	4125	7	FSM	ENSMUSG00000037514.19_ENSMUSG00000086329.2	ENSMUST00000184105.9	1398	7	-29	-2698	1	0	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	865	False	NA	NA	False	NA	NA	NA	131104415	131141106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
tx.11806	chr2	+	4267	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-4	3	1	-1	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGTGTTTGCTTGCAT	865	False	NA	NA	False	NA	NA	NA	131104415	131141105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
tx.11807	chr2	+	4141	7	NNC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	173.527855592889	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	865	False	NA	NA	False	NA	NA	NA	131104415	131141106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_131104609_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
tx.11808	chr2	+	3694	5	FSM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	-72	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	240.508315864546	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	865	False	NA	NA	False	NA	NA	NA	131104415	131141106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131104736_131115830_131116041_131129393_131129518_131135318_131135445_131138192
tx.11809	chr2	-	5334	5	NIC	ENSMUSG00000048911.16	novel	5978	6	NA	NA	52	-420	intron_retention	FALSE	canonical	0	0	junction_4	8.87059749960509	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTGGACCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	131194730	131140406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131194655
tx.1181	chr1	+	2866	4	FSM	ENSMUSG00000026614.8	ENSMUST00000061093.7	5836	4	-23	2993	-23	9	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAAGTGCAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	185187021	185197966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273
tx.11810	chr2	-	5547	6	FSM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	7	424	7	-421	multi-exon	FALSE	canonical	3	12	junction_3	4.63033476111609	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATTTGGACCTGTCA	NA	False	NA	NA	False	NA	NA	NA	131194794	131140407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
tx.11811	chr2	+	2239	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	-72	3	-52	2	multi-exon	FALSE	canonical	3	32	junction_6	48.183746942177	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	131333790	131367089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366163_131366254_131366662
tx.11812	chr2	+	1418	6	FSM	ENSMUSG00000027333.19	ENSMUST00000110179.9	1320	6	-79	-19	-59	8	multi-exon	FALSE	canonical	3	15	junction_4	49.3128786423993	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAAAGGCTCTCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	131333783	131367111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131363978_131364140_131366662
tx.11813	chr2	+	2156	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	100	14	-59	2	multi-exon	FALSE	canonical	3	113	junction_6	10.8269211792745	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	131333783	131367089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
tx.11814	chr2	+	2168	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	16	0	2	0	multi-exon	FALSE	canonical	3	54	junction_2	0.5	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCGGGGTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	131751863	131780349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131751924_131754114_131754213_131778339
tx.11815	chr2	+	3176	2	FSM	ENSMUSG00000027338.17	ENSMUST00000110172.9	3176	2	-1	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACGGTGTCTGGTGGTT	NA	False	NA	NA	False	NA	NA	NA	131792780	131798049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131792836_131794928
tx.11816	chr2	-	4687	11	FSM	ENSMUSG00000027339.16	ENSMUST00000028814.15	8233	11	109	3437	109	0	multi-exon	FALSE	canonical	1	8	junction_10	8.85494212290515	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCTGTGGATCTGCTT	NA	False	NA	NA	False	NA	NA	NA	131871812	131834771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
tx.11817	chr2	-	6359	16	FSM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	5	0	5	0	multi-exon	FALSE	canonical	3	134	junction_8	16.3644601363918	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	7604	False	NA	NA	False	NA	NA	NA	131987023	131894415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
tx.11818	chr2	-	6270	15	NIC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	5	0	intron_retention	FALSE	canonical	3	13	junction_10	41.8786512267459	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	7604	False	NA	NA	False	NA	NA	NA	131987023	131894415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
tx.11819	chr2	+	188	2	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGAAGACTGTGCAGTT	NA	False	NA	NA	False	NA	NA	NA	132044174	132045155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_132044344_132045136
tx.1182	chr1	+	3553	3	FSM	ENSMUSG00000026614.8	ENSMUST00000238198.2	3506	3	-35	-12	-35	12	multi-exon	FALSE	canonical	3	7	junction_1	2	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTGCAAAAAATGTC	NA	False	NA	NA	False	NA	NA	NA	185187009	185197969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_185188627_185194883_185195124_185196273
tx.11820	chr2	-	1551	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	223.123782287371	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4908	False	NA	NA	False	NA	NA	NA	132089689	132081411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
tx.11821	chr2	-	1578	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	34	0	-4	0	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	320	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4904	False	NA	NA	False	NA	NA	NA	132089693	132081411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
tx.11822	chr2	-	3075	3	FSM	ENSMUSG00000027341.11	ENSMUST00000110164.8	2957	3	-120	2	-5	0	multi-exon	FALSE	canonical	3	556	junction_2	10	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4903	False	NA	NA	False	NA	NA	NA	132089694	132081413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_132082547_132085938_132086062_132087875
tx.11823	chr2	-	1282	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	111	125	111	-125	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	1110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8336	False	NA	NA	False	NA	NA	NA	132095123	132091206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
tx.11824	chr2	+	3789	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	44	2294	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	118.061161563922	322	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTTTGTCACTTGT	5288	False	NA	NA	False	NA	NA	NA	132105111	132149542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
tx.11825	chr2	+	3548	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-39	2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.49004957066	44	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	NA	False	NA	NA	False	NA	NA	NA	132127819	132149541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
tx.11826	chr2	+	3536	14	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	3435	2294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.186787055044	98	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTTTGTCACTTGT	NA	False	NA	NA	False	NA	NA	NA	132131293	132149542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_132131347_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
tx.11827	chr2	-	3656	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	28	2	12	-1	multi-exon	FALSE	canonical	3	65	junction_16	14.3132737727671	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTCCTGATTTG	NA	False	NA	NA	False	NA	NA	NA	132420125	132371003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
tx.11828	chr2	-	3670	20	FSM	ENSMUSG00000027346.16	ENSMUST00000110142.8	3703	20	33	0	2	0	multi-exon	TRUE	canonical	3	30	junction_19	19.1733598654971	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	132420135	132371002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414178_132419987
tx.11829	chr2	+	1055	3	FSM	ENSMUSG00000044991.11	ENSMUST00000061891.11	1076	3	21	0	21	0	multi-exon	FALSE	canonical	3	37	junction_1	20.5	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	NA	False	NA	NA	NA	132528871	132592975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_132528902_132533869_132534052_132592132
tx.1183	chr1	+	5783	4	FSM	ENSMUSG00000026614.8	ENSMUST00000238677.2	5684	4	-99	0	91	0	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTCCTGGACTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	185187135	185200959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_185187877_185188510_185188627_185194883_185195124_185196273
tx.11830	chr2	-	2808	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	18	2	18	-2	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	663	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCATTAATGATACAATG	NA	False	NA	NA	False	NA	NA	NA	132657956	132646128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
tx.11831	chr2	+	3172	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	10	-3	10	3	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	293	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTCAGGTCACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	132658070	132685818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
tx.11832	chr2	+	1935	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	-12	1	-12	-1	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	609	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGGGTTGTCCTGTGGT	1610	False	NA	NA	False	NA	NA	NA	132688573	132708704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
tx.11833	chr2	-	6351	4	ISM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	904	-2662	904	2662	3prime_fragment	FALSE	canonical	3	9	junction_1	2.86744175568088	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCCTAAAGACTAGTAGT	NA	False	NA	NA	False	NA	NA	NA	132721907	132707562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154
tx.11834	chr2	-	3739	5	FSM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	9	junction_1	2.48746859276655	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGATGTATTTTGTAACAA	NA	False	NA	NA	False	NA	NA	NA	132722835	132710224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154_132721836_132722713
tx.11835	chr2	-	5178	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	12	298	-1	-298	multi-exon	FALSE	canonical	3	29	junction_5	5.36808406515884	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGAGTGTTCATTCT	2704	False	NA	NA	False	NA	NA	NA	134486053	134436402	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
tx.11836	chr2	+	422	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	252.149137416728	40	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	NA	False	NA	NA	NA	135488442	135493987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493478_135493766
tx.11837	chr2	+	5571	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	134	7	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	17.4713061159182	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCAGAGTATTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	135501064	135856520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
tx.11838	chr2	+	5597	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	85	-19	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_19	23.668415785962	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	NA	False	NA	NA	NA	135501015	135856494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
tx.11839	chr2	+	5454	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-20	3	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	18.1510475266798	60	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTACCAGAGTATTTG	NA	False	NA	NA	False	NA	NA	NA	135501453	135856516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
tx.1184	chr1	-	1270	4	FSM	ENSMUSG00000039246.9	ENSMUST00000195481.2	584	4	-7	-679	-7	-123	multi-exon	FALSE	canonical	3	17	junction_2	56.8174464598878	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTCTAGTCCCATGAT	NA	False	NA	NA	False	NA	NA	NA	185849492	185820050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_185820966_185821640_185821757_185846460_185846561_185849353
tx.11840	chr2	-	2957	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	221	0	-14	0	multi-exon	FALSE	canonical	3	83	junction_3	119.159389055164	139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	False	NA	NA	False	NA	NA	NA	136733088	136715699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
tx.11841	chr2	-	1126	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	221	-403	221	403	multi-exon	FALSE	canonical	3	323	junction_1	8.5	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCTCTGTACCAGTT	NA	False	NA	NA	False	NA	NA	NA	136733088	136722787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_136723560_136727392_136727621_136732962
tx.11842	chr2	+	5648	8	FSM	ENSMUSG00000027281.17	ENSMUST00000099311.9	5089	8	-559	0	1	0	multi-exon	FALSE	canonical	3	13	junction_4	4.68170560233541	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTTGTGCAATTT	9752	False	NA	NA	False	NA	NA	NA	136733528	136913870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
tx.11843	chr2	-	5577	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	35	0	35	0	multi-exon	TRUE	canonical	3	87	junction_14	16.9906327133512	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGTGGAGTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	136958529	136923375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
tx.11844	chr2	+	4637	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	20	0	20	0	multi-exon	FALSE	canonical	3	50	junction_1	2.87228132326901	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCTTTTTTAGTATTT	NA	False	NA	NA	False	NA	NA	NA	138098504	138129342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
tx.11845	chr2	-	2236	14	FSM	ENSMUSG00000039033.12	ENSMUST00000110079.9	2258	14	22	0	2	0	multi-exon	FALSE	canonical	3	37	junction_3	20.460092487948	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	139908703	139675399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
tx.11846	chr2	-	2158	8	ISM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	2	142742	2	310	5prime_fragment	FALSE	canonical	3	57	junction_2	18.1186565254081	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGGTATTTTCTCAG	NA	False	NA	NA	False	NA	NA	NA	139908703	139818141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
tx.11847	chr2	-	2999	6	NNC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	-2	-47571	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.817090896381	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTTTTGTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	139908682	139866022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_139868133_139872520_139872784_139884013_139884083_139890161_139890230_139899206_139899420_139908406
tx.11848	chr2	-	3383	14	FSM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	13	0	13	0	multi-exon	TRUE	canonical	3	379	junction_8	12.585330053057	549	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCGTTTGTATAGCATT	6990	False	NA	NA	False	NA	NA	NA	140012471	139961802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
tx.11849	chr2	+	1099	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	16	51	16	6	multi-exon	FALSE	canonical	3	226	junction_10	17.7042367810646	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCCCAGAATTTTCA	NA	False	NA	NA	False	NA	NA	NA	140012584	140045558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
tx.1185	chr1	-	1423	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	11	144	11	-144	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTCAGATTTACTTAC	NA	False	NA	NA	False	NA	NA	NA	185849496	185820071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
tx.11850	chr2	+	1097	4	FSM	ENSMUSG00000068205.15	ENSMUST00000110062.8	3554	4	4	2453	1	3	multi-exon	FALSE	canonical	3	66	junction_3	7.40870359029762	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCTGTTTATGCTTTG	NA	False	NA	NA	False	NA	NA	NA	140237353	140262418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
tx.11851	chr2	-	3966	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	10	1	-9	-1	multi-exon	FALSE	canonical	3	47	junction_1	10.5	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTGTATCCTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	140513379	140500118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_140503672_140505180_140505380_140513165
tx.11852	chr2	-	5462	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	53	868	-34	369	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAAGTGTATGCTTCT	NA	False	NA	NA	False	NA	NA	NA	142743398	142460261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
tx.11853	chr2	-	5017	25	NIC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	-32	49	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	17.7575785855567	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTAGTTCAGTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	142743396	142460581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_142461837_142490347_142490432_142514208_142514299_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
tx.11854	chr2	+	954	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	1107	0	-1107	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGTTTATTGTCCTAT	1988	False	NA	NA	False	NA	NA	NA	142904958	142913666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
tx.11855	chr2	-	1710	6	ISM	ENSMUSG00000027420.14	ENSMUST00000028907.14	2372	8	14149	4	13919	-4	3prime_fragment	FALSE	canonical	0	0	junction_2	2.92574776766556	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCTCCCTCGTGTAATT	NA	False	NA	NA	False	NA	NA	NA	143690944	143668451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_143669560_143672003_143672090_143673756_143673978_143683593_143683702_143687820_143687911_143690847
tx.11856	chr2	+	1713	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	198	0	198	0	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	763	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	143757437	143785244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
tx.11857	chr2	-	3744	23	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	22165	0	-5933	0	3prime_fragment	FALSE	canonical	3	237	junction_15	46.7493757416225	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	NA	False	NA	NA	False	NA	NA	NA	143831018	143789314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067
tx.11858	chr2	-	5177	24	FSM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_23	53.514586460919	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9758	False	NA	NA	False	NA	NA	NA	143853183	143789314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
tx.11859	chr2	-	3070	23	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_22	85.5170105353847	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9746	False	NA	NA	False	NA	NA	NA	143853195	143789314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143852918
tx.1186	chr1	-	1182	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	31	108	-2	6	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	563	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTCCCTGCTCAGA	NA	False	NA	NA	False	NA	NA	NA	186481524	186453282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
tx.11860	chr8	-	606	3	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	24.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	129480220	129473043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_129473263_129473935_129474085_129479982
tx.11861	chr2	-	2442	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	64	6	-58	-6	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	962	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTCTGGTTTCTGAC	NA	False	NA	NA	False	NA	NA	NA	144112762	144092048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
tx.11862	chr2	+	2055	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	252	1	15	-1	multi-exon	FALSE	canonical	3	74	junction_1	188.862383761299	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	NA	False	NA	NA	NA	144112834	144122435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
tx.11863	chr2	+	2035	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	93	712	52	-1	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	298	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	NA	False	NA	NA	NA	144112912	144122435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
tx.11864	chr2	+	2278	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	81	0	81	0	multi-exon	FALSE	canonical	3	60	junction_1	194.922420465169	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	NA	False	NA	NA	NA	144112941	144122436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913_144121047_144121400
tx.11865	chr2	+	2342	4	ISM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	140	712	99	-1	intron_retention	FALSE	canonical	3	360	junction_1	68.8444300982698	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	NA	False	NA	NA	NA	144112959	144122435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913
tx.11866	chr2	-	1539	4	FSM	ENSMUSG00000037279.14	ENSMUST00000037423.4	1539	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.64279609239471	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTTTTTTAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	144174066	144147094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_144147840_144159630_144159821_144172823_144173042_144173680
tx.11867	chr2	+	3668	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-10	-20	intron_retention	FALSE	canonical	1	20	junction_3	128.814921304239	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	NA	False	NA	NA	NA	144210892	144249575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
tx.11868	chr2	+	3789	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	-9	21	-9	-20	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	409	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	NA	False	NA	NA	NA	144210893	144249575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
tx.11869	chr2	+	950	2	FSM	ENSMUSG00000098387.3	ENSMUST00000183618.3	693	2	-23	-234	-23	234	multi-exon	FALSE	canonical	3	459	junction_1	0	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTATTATTATTAGTCT	NA	False	NA	NA	False	NA	NA	NA	144210892	144215875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144211078_144215110
tx.1187	chr1	-	4373	3	NIC	ENSMUSG00000001305.6	novel	3092	4	NA	NA	-2	6	intron_retention	FALSE	canonical	3	1054	junction_2	5	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTCCCTGCTCAGA	NA	False	NA	NA	False	NA	NA	NA	186481524	186453282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_186453744_186468312_186472061_186481360
tx.11870	chr2	+	3301	11	FSM	ENSMUSG00000027425.19	ENSMUST00000147747.8	3299	11	-23	21	-7	-20	multi-exon	FALSE	canonical	1	81	junction_2	109.46638753517	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	NA	False	NA	NA	NA	144210895	144249575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
tx.11871	chr2	+	4378	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	23	2	-1	-2	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCTGTTTCTGGTATT	620	False	NA	NA	False	NA	NA	NA	144369660	144383913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
tx.11872	chr2	-	2131	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	39	0	39	0	multi-exon	FALSE	canonical	3	248	junction_1	20.0873094266007	281	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	144392750	144384184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
tx.11873	chr2	+	2761	20	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	371	junction_1	64.9806278398403	628	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCAGATTTTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	144398171	144432665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
tx.11874	chr2	+	2771	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	5	3	5	-3	multi-exon	FALSE	canonical	3	154	junction_1	107.06740569791	349	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCAGATTTTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	144398180	144432666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
tx.11875	chr2	+	458	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	13	0	13	0	multi-exon	FALSE	canonical	3	228	junction_1	0	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTGTCTTCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	144435986	144437286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144436126_144436967
tx.11876	chr2	+	1241	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	78	31	78	-31	multi-exon	TRUE	canonical	3	290	junction_5	10.373041983912	186	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATTAAATTCTGCTG	NA	False	NA	NA	False	NA	NA	NA	144441894	144610647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
tx.11877	chr2	+	4778	13	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.53847895759369	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGTCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	145517290	145729535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_145517505_145554374_145554499_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
tx.11878	chr2	+	4903	14	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	-49	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	4.12238800214593	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGTCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	145517237	145729535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_145517505_145554374_145554499_145579302_145579375_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
tx.11879	chr2	+	3374	5	ISM	ENSMUSG00000001768.17	ENSMUST00000147976.8	4657	13	74300	1	-2228	-1	3prime_fragment	FALSE	canonical	3	11	junction_1	0.707106781186548	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGTCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	145702335	145729535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
tx.1188	chr1	+	3204	5	ISM	ENSMUSG00000039210.17	ENSMUST00000097443.10	2411	6	-9	21	-9	-21	intron_retention	FALSE	canonical	3	75	junction_2	6.51920240520265	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGATTTTCAGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	186947695	186968007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943
tx.11880	chr2	+	4726	4	NIC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	-5	-107	intron_retention	FALSE	canonical	3	980	junction_1	198.001683494527	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	145745155	145758238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_145745283_145750510_145754449_145757453_145757600_145757723
tx.11881	chr2	+	1044	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	21	107	0	-107	multi-exon	FALSE	canonical	3	102	junction_3	436.248094551713	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	145745181	145758238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
tx.11882	chr2	+	1020	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	19	103	-2	-103	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	395	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAAGTTTGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	145745179	145758242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
tx.11883	chr2	+	1627	5	NIC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	-16	-107	intron_retention	FALSE	canonical	3	961	junction_2	190.755570036631	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	145745197	145758238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_145745283_145750510_145750536_145753592_145754449_145757453_145757600_145757723
tx.11884	chr2	-	2350	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	298	780	-2	-780	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	313	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTACTTGAGTCCGA	NA	False	NA	NA	False	NA	NA	NA	145776636	145760178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
tx.11885	chr2	-	9666	41	FSM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	-61	1425	-39	-1425	multi-exon	FALSE	canonical	3	23	junction_26	5.33291665038935	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATATTGATTTGAT	NA	False	NA	NA	False	NA	NA	NA	146353985	146083223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
tx.11886	chr2	-	6255	40	NIC	ENSMUSG00000037110.21	novel	3095	19	NA	NA	-24	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	6.39896441325705	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGGAGCATTTTGATTT	NA	False	NA	NA	False	NA	NA	NA	146353970	146100488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_146100865_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
tx.11887	chr2	-	6432	38	ISM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	-57	74380	-35	46427	5prime_fragment	FALSE	canonical	3	23	junction_23	5.31505572736096	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATAGTCTTCTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	146353981	146156178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
tx.11888	chr2	+	2167	14	FSM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	16	0	16	0	multi-exon	FALSE	canonical	3	86	junction_6	16.1728825562271	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCACTGTAATTAGGTGT	NA	False	NA	NA	False	NA	NA	NA	146697799	146812017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
tx.11889	chr2	+	3406	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	28	0	28	0	multi-exon	TRUE	canonical	3	956	junction_9	74.1082057489866	1951	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	146854943	146919920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
tx.1189	chr1	+	5976	6	FSM	ENSMUSG00000104394.3_ENSMUSG00000039210.17	ENSMUST00000044812.12	1639	6	-36	-4301	0	-1639	multi-exon	FALSE	canonical	2	6	junction_5	31.740195336513	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	186947704	186970915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966150
tx.11890	chr2	+	939	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	17	0	17	0	multi-exon	FALSE	canonical	3	586	junction_1	0	236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	False	NA	NA	False	NA	NA	NA	148514562	148517947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_148514756_148517201
tx.11891	chr2	+	4106	6	FSM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	124	2	-64	-2	multi-exon	FALSE	canonical	3	53	junction_1	11.7983049630021	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGCTTTGTAAA	495	False	NA	NA	False	NA	NA	NA	148523066	148534867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
tx.11892	chr2	+	4041	5	ISM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	2569	0	-1020	0	3prime_fragment	FALSE	canonical	3	65	junction_1	7.82224392358101	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGCTTTGTAAAAG	2940	False	NA	NA	False	NA	NA	NA	148525511	148534869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
tx.11893	chr2	-	4327	10	FSM	ENSMUSG00000027438.15	ENSMUST00000136513.2	4311	10	-21	5	-21	-5	multi-exon	FALSE	canonical	3	13	junction_4	1.6629588385662	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACCTTTTGACTGTTTT	NA	False	NA	NA	False	NA	NA	NA	148574354	148535909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148551236_148551354_148554594_148554675_148574185
tx.11894	chr2	-	773	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	87	0	-38	0	multi-exon	FALSE	canonical	3	2071	junction_1	68	644	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	148717409	148713641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_148713964_148714736_148714851_148717072
tx.11895	chr2	+	1992	4	FSM	ENSMUSG00000074736.11	ENSMUST00000109935.8	2050	4	6	52	6	-52	multi-exon	FALSE	canonical	1	4	junction_1	14.290634073484	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTTGCTTACGACTTT	NA	False	NA	NA	False	NA	NA	NA	149672713	149846260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_149672846_149741337_149741896_149772824_149772963_149845096
tx.11896	chr2	+	2065	4	NIC	ENSMUSG00000074736.11	novel	2050	4	NA	NA	4	-52	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	14.7044966667418	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTTGCTTACGACTTT	NA	False	NA	NA	False	NA	NA	NA	149672792	149846260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_149672998_149741337_149741896_149772824_149772963_149845096
tx.11897	chr2	-	4097	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	29	1	-1	-1	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCCTGAGACTCTTC	NA	False	NA	NA	False	NA	NA	NA	149978599	149956326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
tx.11898	chr2	+	4963	4	FSM	ENSMUSG00000079009.9	ENSMUST00000109926.8	1728	4	2	-3237	2	3237	multi-exon	FALSE	canonical	3	34	junction_3	16.0485374896143	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTAAATGCCTCATGT	NA	False	NA	NA	False	NA	NA	NA	150023676	150038436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775
tx.11899	chr2	+	5848	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	10	-2840	10	2840	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAATGCCTCGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	150099446	150115060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
tx.119	chr1	-	1955	14	FSM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	20	0	20	0	multi-exon	FALSE	canonical	3	132	junction_10	82.0868352460372	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	NA	False	NA	NA	False	NA	NA	NA	33708856	33492890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
tx.1190	chr1	+	4822	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	2	-277	2	0	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTGTTGGTGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	186947709	187083901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
tx.11900	chr2	+	4084	3	NIC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	36	2022	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	56.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGGAGGAGGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	150153386	150170954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_150153479_150165621_150165749_150167089
tx.11901	chr2	+	4139	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	44	-2024	44	2024	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAGGAGGTGTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	150153394	150170956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
tx.11902	chr2	-	9485	4	NIC	ENSMUSG00000063364.11	novel	745	5	NA	NA	8	8807	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	3.29983164553722	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTTTGAGATATGAA	NA	False	NA	NA	False	NA	NA	NA	150204677	150175948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_150185076_150186228_150186290_150186499_150186627_150204507
tx.11903	chr2	-	7617	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	-38	-4657	-38	4657	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	150293444	150244403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
tx.11904	chr2	-	2660	4	FSM	ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	0	74	0	-74	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAAGGCAATTCTTAG	NA	False	NA	NA	False	NA	NA	NA	150327011	150312984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
tx.11905	chr2	-	2213	9	FSM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	22	0	-1	0	multi-exon	FALSE	canonical	3	74	junction_7	10.0054672554559	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	1021	False	NA	NA	False	NA	NA	NA	150450465	150424999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
tx.11906	chr2	-	3339	14	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	8001	-6	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	46.5577201092917	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	150502133	150460030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150502032
tx.11907	chr2	-	3600	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	12	6	12	-6	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	150510166	150460030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
tx.11908	chr2	-	4810	2	NIC	ENSMUSG00000086563.2	novel	768	3	NA	NA	-32	2840	intron_retention	FALSE	canonical	3	31	junction_1	0	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTATTTGGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	150548828	150543615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_150548201_150548603
tx.11909	chr2	+	2521	14	FSM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	17	2	17	-2	multi-exon	FALSE	canonical	3	112	junction_1	18.2695141678424	243	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	NA	False	NA	NA	NA	150590978	150613593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
tx.1191	chr1	+	4687	8	FSM	ENSMUSG00000039210.17	ENSMUST00000110943.9	4702	8	11	4	-5	-4	multi-exon	FALSE	canonical	3	14	junction_6	24.9038969166003	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCCGTTGTTGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	186947729	187083897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187073683_187073773_187080553
tx.11910	chr2	+	3874	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	27	8	27	-8	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	257	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCACTGTGGTATCTG	NA	False	NA	NA	False	NA	NA	NA	150628681	150673670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
tx.11911	chr2	-	1950	13	FSM	ENSMUSG00000032046.16	ENSMUST00000056149.15	1999	13	29	20	19	4	multi-exon	FALSE	canonical	2	181	junction_4	35.7897991363771	265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTTTTCTCTACAAA	NA	False	NA	NA	False	NA	NA	NA	150746632	150674432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
tx.11912	chr2	+	1099	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	-15	3	-15	-3	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGAATCTCCTGGTAG	2407	False	NA	NA	False	NA	NA	NA	150751498	150773197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
tx.11913	chr2	-	5074	24	FSM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	17	2	-5	-2	multi-exon	FALSE	canonical	3	41	junction_10	8.5081968705865	137	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTTTAAAGTTTTAAA	7580	False	NA	NA	False	NA	NA	NA	150851301	150776440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150792300_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
tx.11914	chr2	-	1368	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	14	12	14	-12	multi-exon	FALSE	canonical	3	184	junction_1	0	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTCATCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	150881304	150871616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_150872837_150881156
tx.11915	chr2	+	1369	9	FSM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	-9	4	-6	-4	multi-exon	FALSE	canonical	3	1010	junction_3	133.71979799192	754	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACTACCAATTCTGTT	NA	False	NA	NA	False	NA	NA	NA	151336203	151353221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
tx.11916	chr2	+	1576	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	80	2	-22	0	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	1556	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	151384482	151403610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
tx.11917	chr2	-	1343	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	18	2448	1	5	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGCTCCTTTTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	151583212	151560179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
tx.11918	chr2	-	1724	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	28	2	28	-2	multi-exon	FALSE	canonical	3	86	junction_1	0	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTTGGACTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	151822111	151811319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_151812845_151821912
tx.11919	chr2	+	2692	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	-24	1	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGACTTGTGTGCTCA	NA	False	NA	NA	False	NA	NA	NA	151838430	151851177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
tx.1192	chr1	-	3713	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	-9	2	-8	-2	multi-exon	FALSE	canonical	3	162	junction_13	20.9446461104513	436	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGTGTCTTCAGTTA	NA	False	NA	NA	False	NA	NA	NA	188740046	188703293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
tx.11920	chr2	+	2612	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	13	-35	13	0	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGACTTGTGTGCTCA	NA	False	NA	NA	False	NA	NA	NA	151841797	151851177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
tx.11921	chr2	+	2525	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	68	-2147	60	-18	multi-exon	FALSE	canonical	3	20	junction_1	0	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGCAATAGCCTTAGC	NA	False	NA	NA	False	NA	NA	NA	151947503	151953278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_151947659_151950908
tx.11922	chr2	+	2589	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	206	17	206	-17	multi-exon	FALSE	canonical	3	134	junction_1	0	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGCAATAGCCTTAGCC	NA	False	NA	NA	False	NA	NA	NA	151947649	151953279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_151947868_151950908
tx.11923	chr2	+	986	2	FSM	ENSMUSG00000068079.6	ENSMUST00000089112.6	980	2	-6	0	-6	0	multi-exon	FALSE	canonical	3	131	junction_1	0	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTATCCTGGCTAAG	7083	False	NA	NA	False	NA	NA	NA	151985474	151991017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_151986059_151990615
tx.11924	chr2	+	4181	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	20	5	-17	-5	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTCCATGCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	152068778	152123767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
tx.11925	chr2	+	3357	8	FSM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	27	2	4	-2	multi-exon	FALSE	canonical	3	150	junction_1	23.7366503835013	267	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTCTTTGTATCATC	NA	False	NA	NA	False	NA	NA	NA	152135774	152155914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
tx.11926	chr2	+	3290	8	NNC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	59.9952379062586	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTCTTTGTATCATC	NA	False	NA	NA	False	NA	NA	NA	152135766	152155914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153311_152153425_152153629
tx.11927	chr2	-	4550	4	ISM	ENSMUSG00000027466.16	ENSMUST00000130165.8	1842	5	148	0	148	0	intron_retention	FALSE	canonical	3	483	junction_1	69.4854101392675	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	NA	False	NA	NA	NA	152164769	152158253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043
tx.11928	chr2	-	3308	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	8	-2	intron_retention	FALSE	canonical	3	483	junction_1	60.3850974993003	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	NA	False	NA	NA	NA	152174324	152158255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
tx.11929	chr2	-	2374	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	8	2	8	-2	multi-exon	FALSE	canonical	3	444	junction_6	68.3604931579153	549	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	NA	False	NA	NA	NA	152174324	152158255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
tx.1193	chr1	-	4473	6	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	33522	997	-5708	-997	3prime_fragment	FALSE	canonical	3	232	junction_3	17.993332098308	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTAGTAGATGATCTGT	NA	False	NA	NA	False	NA	NA	NA	189386761	189373799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457
tx.11930	chr2	-	2213	13	FSM	ENSMUSG00000027466.16	ENSMUST00000028964.14	2252	13	37	2	37	-2	multi-exon	FALSE	canonical	3	72	junction_12	150.053231295505	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	NA	False	NA	NA	NA	152174536	152158255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
tx.11931	chr2	-	2203	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	166.375148384607	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAAAGGTGTCATGCT	NA	False	NA	NA	False	NA	NA	NA	152174315	152158256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
tx.11932	chr2	-	2049	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	-26	3	-26	-3	multi-exon	FALSE	canonical	3	926	junction_3	7.71722460186015	1202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTTGGTGACTTTC	NA	False	NA	NA	False	NA	NA	NA	152185978	152179344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
tx.11933	chr2	+	1575	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	10	3619	10	15	multi-exon	FALSE	canonical	3	117	junction_7	14.82905345753	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTAGTGTTTCGT	NA	False	NA	NA	False	NA	NA	NA	152511390	152546971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
tx.11934	chr2	+	1762	13	FSM	ENSMUSG00000019188.17	ENSMUST00000089059.9	1743	13	-7	-12	-5	12	multi-exon	FALSE	canonical	3	19	junction_11	48.170054667466	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCTCTGCCTAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	152511400	152546968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546115_152546541
tx.11935	chr2	+	6136	8	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	17695	0	-4683	0	3prime_fragment	FALSE	canonical	3	117	junction_3	17.083229633002	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTCTCTTCTTATTCGT	NA	False	NA	NA	False	NA	NA	NA	152529075	152550590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
tx.11936	chr2	-	3010	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	-438	-4	8	0	multi-exon	FALSE	canonical	3	144	junction_2	91.5	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	False	NA	NA	False	NA	NA	NA	152673024	152622587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_152624203_152671346_152672023_152672305
tx.11937	chr2	-	2397	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	20	0	2	0	multi-exon	FALSE	canonical	3	148	junction_2	89.5	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	False	NA	NA	False	NA	NA	NA	152673628	152622587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_152624203_152671346_152672023_152673522
tx.11938	chr2	-	2421	3	NIC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	148	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	False	NA	NA	False	NA	NA	NA	152673634	152622587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_152624203_152671346_152672041_152673522
tx.11939	chr2	+	4121	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	40	0	9	0	multi-exon	FALSE	canonical	3	176	junction_2	164.31464036434	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	2734	False	NA	NA	False	NA	NA	NA	152689923	152737241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
tx.1194	chr1	-	7509	7	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	28926	1005	-10304	-1005	3prime_fragment	FALSE	canonical	3	192	junction_6	31.7157514318814	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTAAGTTAGTAGTAGA	NA	False	NA	NA	False	NA	NA	NA	189391357	189373807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841
tx.11940	chr2	+	4119	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	28	-664	11	-3	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	573	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGACTTGCCTTGGTCA	2736	False	NA	NA	False	NA	NA	NA	152689925	152737238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
tx.11941	chr2	+	2991	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	43	620	43	-620	multi-exon	FALSE	canonical	3	159	junction_1	172.681016802699	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGTAAGTGAGAAGCAG	2768	False	NA	NA	False	NA	NA	NA	152689957	152735954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
tx.11942	chr2	+	2976	18	NIC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	40	-635	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	218.393996520653	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2765	False	NA	NA	False	NA	NA	NA	152689954	152735939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_152690218_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
tx.11943	chr2	-	1232	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	40	1	-10	-1	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGAGTTGTCACCCAC	8679	False	NA	NA	False	NA	NA	NA	152857307	152850810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
tx.11944	chr2	+	2152	13	NNC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	-803	-8	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	20.5877188310572	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCCCAAGGGTCAGCTT	NA	False	NA	NA	False	NA	NA	NA	152949584	152993351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_152949942_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
tx.11945	chr2	+	2068	13	FSM	ENSMUSG00000003283.16	ENSMUST00000189688.2	2090	13	15	7	15	-7	multi-exon	FALSE	canonical	3	76	junction_9	8.17346655682615	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCCAAGGGTCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	152950402	152993352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
tx.11946	chr2	+	3657	18	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	123.527310906505	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	NA	False	NA	NA	False	NA	NA	NA	153003461	153052383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_153003492_153020805_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
tx.11947	chr2	+	3658	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	236	2	-2	-2	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	736	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGGGTGCGGATTGA	NA	False	NA	NA	False	NA	NA	NA	153003458	153052384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
tx.11948	chr2	+	3623	17	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	17585	5	-11511	-5	3prime_fragment	FALSE	canonical	3	460	junction_5	37.7110208526632	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATGCAAGGGTGCGGAT	6201	False	NA	NA	False	NA	NA	NA	153020807	153052381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
tx.11949	chr2	-	5425	3	FSM	ENSMUSG00000051413.18	ENSMUST00000056924.14	5485	3	50	10	50	3	multi-exon	FALSE	canonical	3	22	junction_1	0.5	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTGCAGTTTTGAAC	7354	False	NA	NA	False	NA	NA	NA	153083296	153069688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_153074640_153077719_153078093_153083195
tx.1195	chr1	-	10140	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	-10	1000	-10	-1000	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTAGTAGTAGATGATC	NA	False	NA	NA	False	NA	NA	NA	189420293	189373802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
tx.11950	chr2	+	7581	6	NIC	ENSMUSG00000046020.14	novel	5600	7	NA	NA	-69	0	intron_retention	FALSE	canonical	3	95	junction_3	7.52595508889071	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGCCTTCATA	NA	False	NA	NA	False	NA	NA	NA	153083383	153112167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
tx.11951	chr2	+	5642	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-42	0	-42	0	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGCCTTCATA	NA	False	NA	NA	False	NA	NA	NA	153083410	153112167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
tx.11952	chr2	+	6183	3	FSM	ENSMUSG00000046020.14	ENSMUST00000152390.2	4833	3	834	-2184	834	0	multi-exon	FALSE	canonical	3	101	junction_1	8	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGCCTTCATA	NA	False	NA	NA	False	NA	NA	NA	153100325	153112167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_153101713_153103117_153103361_153107614
tx.11953	chr2	+	5616	9	FSM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	19	0	19	0	multi-exon	FALSE	canonical	3	30	junction_1	5.17052946998661	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCTTGTCAGTGAT	7832	False	NA	NA	False	NA	NA	NA	153133351	153175310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
tx.11954	chr2	+	5112	8	ISM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	25233	2	25233	-2	3prime_fragment	FALSE	canonical	3	31	junction_1	4.89064079103534	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTGTCCTTGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	153158565	153175308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
tx.11955	chr2	-	1615	2	FSM	ENSMUSG00000073236.5	ENSMUST00000139636.2	427	2	-23	-1165	-23	-313	multi-exon	FALSE	canonical	2	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATTATTTTAACTTTAA	8989	False	NA	NA	False	NA	NA	NA	153188016	153183389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_153184785_153187796
tx.11956	chr2	-	2228	3	NNC	ENSMUSG00000073236.5	novel	1898	2	NA	NA	-333	-327	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	7.5	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGCTAAAAAATTGCAT	8679	False	NA	NA	False	NA	NA	NA	153188326	153183403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_153184785_153187037_153187099_153187540
tx.11957	chr2	+	6965	12	FSM	ENSMUSG00000042548.15	ENSMUST00000227428.2	6981	12	14	2	-2	-2	multi-exon	FALSE	canonical	0	0	junction_2	51.8797082897678	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTCTCCTTGTCATCT	NA	False	NA	NA	False	NA	NA	NA	153187762	153245925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_153188311_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
tx.11958	chr2	+	6683	12	NNC	ENSMUSG00000042548.15	novel	717	4	NA	NA	656	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.7356338200143	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTCTCCTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	153188420	153245923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_153188689_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
tx.11959	chr2	+	5240	2	ISM	ENSMUSG00000042548.15	ENSMUST00000109790.2	6968	13	51684	1	4669	-1	3prime_fragment	FALSE	canonical	3	143	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTCCTTGTCATCTG	6892	False	NA	NA	False	NA	NA	NA	153239448	153245926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_153239921_153241158
tx.1196	chr1	+	3569	13	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	-12	24717	-12	2	5prime_fragment	FALSE	canonical	3	11	junction_2	5.22812904711937	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTGGATTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	189460452	189584175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
tx.11960	chr2	-	5728	8	FSM	ENSMUSG00000061411.13	ENSMUST00000109784.2	5610	8	-113	-5	-113	1	multi-exon	FALSE	canonical	3	28	junction_7	27.1496232168391	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTTCGACTATGTC	NA	False	NA	NA	False	NA	NA	NA	153286512	153249380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153286276
tx.11961	chr2	-	5970	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8887	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	27.7676070268938	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGAGCTTCGACTATG	NA	False	NA	NA	False	NA	NA	NA	153363004	153249382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
tx.11962	chr2	-	6697	11	NIC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-317	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	26.7546257682667	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGAGCTTCGACTATG	NA	False	NA	NA	False	NA	NA	NA	153372208	153249382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
tx.11963	chr2	-	5989	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8887	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	25.0856532703456	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGAGCTTCGACTATGT	NA	False	NA	NA	False	NA	NA	NA	153363004	153249381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
tx.11964	chr2	-	6110	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	168	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.6602204524097	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACTGAGCTTCGACTAT	NA	False	NA	NA	False	NA	NA	NA	153371723	153249383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371462
tx.11965	chr2	-	5708	8	NIC	ENSMUSG00000061411.13	novel	5610	8	NA	NA	-113	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	31.3205937337838	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGAGCTTCGACTATG	NA	False	NA	NA	False	NA	NA	NA	153286512	153249382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153286276
tx.11966	chr2	-	6053	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-5	-246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.6339680746716	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGGATGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	153371896	153249631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371462
tx.11967	chr2	-	6709	11	FSM	ENSMUSG00000061411.13	ENSMUST00000035346.14	6399	11	-311	1	-311	-1	multi-exon	FALSE	canonical	3	34	junction_10	23.8863978029338	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGAGCTTCGACTATG	NA	False	NA	NA	False	NA	NA	NA	153372202	153249382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
tx.11968	chr2	-	1288	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	29	1893	-12	8	multi-exon	FALSE	canonical	3	166	junction_3	11.9373363863133	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTGAATCCACAAAATGT	NA	False	NA	NA	False	NA	NA	NA	153474672	153460745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
tx.11969	chr2	+	4022	21	NIC	ENSMUSG00000027478.16	novel	4208	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	20.6421898063166	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	NA	False	NA	NA	NA	153491369	153529650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
tx.1197	chr1	+	4376	19	FSM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	-11	6381	-11	246	multi-exon	FALSE	canonical	3	10	junction_17	4.78713553878169	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGACTGATCTGCAGTGT	NA	False	NA	NA	False	NA	NA	NA	189460453	189602511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
tx.11970	chr2	+	4209	23	FSM	ENSMUSG00000027478.16	ENSMUST00000109771.2	3630	23	-167	-412	0	2	multi-exon	FALSE	canonical	3	48	junction_1	22.8903242036621	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTGTGTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	153491369	153529648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
tx.11971	chr2	+	4079	22	NIC	ENSMUSG00000027478.16	novel	4208	23	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	28.8066507815765	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	NA	False	NA	NA	NA	153491375	153529650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
tx.11972	chr2	+	4011	21	FSM	ENSMUSG00000027478.16	ENSMUST00000109772.8	4015	21	4	0	4	0	multi-exon	FALSE	canonical	3	33	junction_15	23.6207535866238	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	NA	False	NA	NA	NA	153491377	153529650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
tx.11973	chr2	+	4204	23	FSM	ENSMUSG00000027478.16	ENSMUST00000072997.10	4208	23	4	0	0	0	multi-exon	FALSE	canonical	3	33	junction_15	25.158013034314	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	NA	False	NA	NA	NA	153491373	153529650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
tx.11974	chr2	+	2573	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	15	4748	15	-4748	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	799	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	NA	False	NA	NA	NA	153583208	153610482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
tx.11975	chr2	+	1625	15	FSM	ENSMUSG00000038572.8	ENSMUST00000045959.8	1637	15	12	0	12	0	multi-exon	FALSE	canonical	3	25	junction_6	7.50951777032701	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGAGTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	154065673	154082822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154070773_154070859_154070950_154071015_154071386_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677_154078742_154080747_154080828_154082671
tx.11976	chr2	-	3672	13	ISM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	30	-7	2	1	intron_retention	FALSE	canonical	3	80	junction_3	9.22970747098737	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACTTTTTTCAT	5710	False	NA	NA	False	NA	NA	NA	154214609	154177298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555
tx.11977	chr2	-	1982	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	-8	-4	4	-2	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTGTCTACTTTTTT	5672	False	NA	NA	False	NA	NA	NA	154214647	154177301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
tx.11978	chr2	-	2115	8	FSM	ENSMUSG00000027488.13	ENSMUST00000109728.8	2131	8	11	5	-7	-5	multi-exon	FALSE	canonical	3	100	junction_7	15.9808558939138	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCATGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	154250008	154218237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
tx.11979	chr2	+	5953	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-19	-5	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	140.841474671541	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCTGGACCAGACCTG	5284	False	NA	NA	False	NA	NA	NA	154278381	154381271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
tx.1198	chr1	-	1900	13	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-78	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	142.185911163284	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTCTGTGAGGATGC	NA	False	NA	NA	False	NA	NA	NA	189654638	189612678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_189613064_189613691_189613821_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
tx.11980	chr2	+	1688	9	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-34	1	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	148.90553842957	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGTCTACCACACACAC	5269	False	NA	NA	False	NA	NA	NA	154278366	154373520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141
tx.11981	chr2	+	3718	8	ISM	ENSMUSG00000038533.16	ENSMUST00000099178.10	3247	9	-55	-2	-52	2	intron_retention	TRUE	canonical	3	494	junction_7	35.6026827698161	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGATTTAAATTGTG	5251	False	NA	NA	False	NA	NA	NA	154278348	154368335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823
tx.11982	chr2	+	6100	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-37	6	-23	-6	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	651	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGCTGGACCAGACCT	5280	False	NA	NA	False	NA	NA	NA	154278377	154381270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
tx.11983	chr2	+	1837	10	ISM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-48	7751	-34	6	5prime_fragment	FALSE	canonical	3	422	junction_9	51.6952131413383	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTACCACACACACACACA	5269	False	NA	NA	False	NA	NA	NA	154278366	154373525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141
tx.11984	chr2	+	6087	11	FSM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	-12	5	-12	-5	multi-exon	FALSE	canonical	3	122	junction_9	126.860553364708	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCTGGACCAGACCTG	5291	False	NA	NA	False	NA	NA	NA	154278388	154381271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
tx.11985	chr2	+	5938	10	NIC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	174.353904317102	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCTGGACCAGACCTG	5296	False	NA	NA	False	NA	NA	NA	154278393	154381271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
tx.11986	chr2	-	1845	13	FSM	ENSMUSG00000027489.16	ENSMUST00000000895.13	1829	13	-16	0	8	0	multi-exon	FALSE	canonical	3	34	junction_6	10.0840220150494	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCCCCTGTCTCT	7295	False	NA	NA	False	NA	NA	NA	154400802	154386318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
tx.11987	chr2	-	2468	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	38	226	38	1	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	108	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGGTTTGAAACTCTC	9540	False	NA	NA	False	NA	NA	NA	154411774	154401552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
tx.11988	chr2	-	2468	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	38	226	38	1	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	794	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGGTTTGAAACTCTC	9540	False	NA	NA	False	NA	NA	NA	154411774	154401552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
tx.11989	chr2	-	1863	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	1	925	1	-925	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAATCTTAATCATAT	NA	False	NA	NA	False	NA	NA	NA	154445627	154428602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
tx.1199	chr1	-	3089	5	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	176	0	intron_retention	FALSE	non_canonical	0	0	junction_3	155.742375415299	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	NA	False	NA	NA	NA	189621023	189612688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617495_189617617_189618717
tx.11990	chr2	+	1614	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	0	2	0	-2	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCTGTGTGTTCAGTCA	NA	False	NA	NA	False	NA	NA	NA	154498937	154536703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
tx.11991	chr2	+	1582	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	220	0	1	0	multi-exon	FALSE	canonical	3	28	junction_4	48.6369772452561	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGAGGTGGAATGG	NA	False	NA	NA	False	NA	NA	NA	154633272	154709164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
tx.11992	chr2	+	1534	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	196	17	1	0	multi-exon	FALSE	canonical	3	129	junction_2	14.5945195193264	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGAGGTGGAATGG	NA	False	NA	NA	False	NA	NA	NA	154633272	154709164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
tx.11993	chr2	+	1451	8	FSM	ENSMUSG00000027593.16	ENSMUST00000109701.10	1709	8	257	1	1	0	multi-exon	FALSE	canonical	3	70	junction_1	30.0557305480255	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGAGGTGGAATGG	NA	False	NA	NA	False	NA	NA	NA	154633272	154709164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
tx.11994	chr2	-	2372	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4169.46393510879	505	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGCTCCATTGCTTTTG	3726	False	NA	NA	False	NA	NA	NA	154734761	154713335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_154714088_154714157_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
tx.11995	chr2	-	1435	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	95	1012	-9	-1004	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	5620	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCCTTCAGTTTTCTT	3727	False	NA	NA	False	NA	NA	NA	154734760	154714341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
tx.11996	chr2	-	2488	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	41	14	-9	-14	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGGCTAAAAGCTGGT	NA	False	NA	NA	False	NA	NA	NA	154916376	154901243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
tx.11997	chr2	+	5154	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	5	0	5	0	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	154975433	155068775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
tx.11998	chr2	+	5358	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	-48	-1	2	1	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTCGTCTGC	NA	False	NA	NA	False	NA	NA	NA	154975430	155068774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
tx.11999	chr2	+	656	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	24	4	24	1	multi-exon	FALSE	canonical	3	1428	junction_1	142.385236438177	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTGTGTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	155078478	155092193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
tx.12	chr1	+	6176	25	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	5	-407	intron_retention	FALSE	canonical	1	1	junction_21	43.2743187891695	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCCTTTTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	6284873	6345392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6335945_6336000_6338921_6338981_6340914_6341052_6342924_6342996_6344421
tx.120	chr1	+	4317	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	1	4	1	-1	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGAATTGTGTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	33758976	33781641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
tx.1200	chr1	-	1706	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.8538448651751	289	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	NA	False	NA	NA	NA	189654583	189612688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
tx.12000	chr2	+	961	4	FSM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	150	1	-96	-1	multi-exon	FALSE	canonical	3	435	junction_1	22.4251842554055	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCCAGCTGCTTG	NA	False	NA	NA	False	NA	NA	NA	155118366	155119992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_155118567_155118877_155118934_155119017_155119125_155119394
tx.12001	chr2	+	3846	4	FSM	ENSMUSG00000038375.16	ENSMUST00000174685.8	740	4	-18	-3088	8	-5	multi-exon	FALSE	canonical	3	14	junction_2	32.8261413442938	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATGCTTTCTGCCTCAG	4049	False	NA	NA	False	NA	NA	NA	155223741	155231765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_155223938_155227209_155227385_155227920_155228090_155228459
tx.12002	chr2	+	3969	4	FSM	ENSMUSG00000038375.16	ENSMUST00000043237.14	3979	4	7	3	7	-3	multi-exon	FALSE	canonical	3	61	junction_1	13.490737563232	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTTCTGCCTCAGCT	4048	False	NA	NA	False	NA	NA	NA	155223740	155231767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_155223938_155227209_155227385_155227800_155228090_155228459
tx.12003	chr2	-	2918	5	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	33205	9	-4017	0	3prime_fragment	FALSE	canonical	3	35	junction_4	56.3044181214938	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	556	False	NA	NA	False	NA	NA	NA	155249498	155232584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394
tx.12004	chr2	-	4050	14	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_7	41.7575419258882	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	NA	False	NA	NA	NA	155315756	155232584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260909_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
tx.12005	chr2	-	4085	14	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	120	junction_7	19.2079865046321	73	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	NA	False	NA	NA	NA	155315755	155232584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
tx.12006	chr2	-	7079	15	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-31	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	44.4323034720994	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGGTATGTTATTG	NA	False	NA	NA	False	NA	NA	NA	155315775	155232586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394_155250371_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
tx.12007	chr2	-	2432	14	ISM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	8243	6	349	-6	3prime_fragment	FALSE	canonical	2	7	junction_10	4.74933816628712	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGACTCTGGCTTGATTT	8950	False	NA	NA	False	NA	NA	NA	155348525	155332304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245
tx.12008	chr2	+	2845	18	FSM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	86	0	1	0	multi-exon	FALSE	canonical	2	49	junction_8	8.02030295659528	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTTTTAGGTATCTG	2093	False	NA	NA	False	NA	NA	NA	155359953	155404666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
tx.12009	chr2	-	1885	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	76	2	-7	-2	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	562	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTCATTGTTTCATGT	8426	False	NA	NA	False	NA	NA	NA	155434654	155405102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
tx.1201	chr1	-	1181	9	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	-50	4697	-50	-143	5prime_fragment	FALSE	canonical	3	299	junction_4	18.6543393075177	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTCCTGTGTGCTCG	NA	False	NA	NA	False	NA	NA	NA	189654610	189617385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
tx.12010	chr2	+	2544	14	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	18120	100	272	4	3prime_fragment	FALSE	canonical	3	44	junction_5	10.8850910469592	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTCCTTATTTCTTG	NA	False	NA	NA	False	NA	NA	NA	155471251	155476127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
tx.12011	chr2	-	3155	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	37	12	-15	-12	multi-exon	TRUE	canonical	3	309	junction_12	37.6501520663235	498	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATGTGGACCTGACTT	NA	False	NA	NA	False	NA	NA	NA	155534267	155476202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
tx.12012	chr2	-	1894	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	50	346	50	-346	multi-exon	TRUE	canonical	3	287	junction_6	17.8672885463911	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACATGCTGGATTCTT	NA	False	NA	NA	False	NA	NA	NA	155571345	155543942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
tx.12013	chr2	-	1268	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	227	5	-35	0	multi-exon	TRUE	canonical	3	1052	junction_5	244.745255316625	524	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGTGCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	155668618	155661756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
tx.12014	chr2	-	2407	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	251	-25	1	0	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	280	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTCCTGGAATGGATG	NA	False	NA	NA	False	NA	NA	NA	155771979	155688815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
tx.12015	chr2	+	7987	33	NIC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-5	0	intron_retention	FALSE	canonical	3	36	junction_1	22.1895245555194	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	155798472	155840820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
tx.12016	chr2	+	3364	6	ISM	ENSMUSG00000038241.17	ENSMUST00000148191.2	6361	15	14181	0	4655	0	3prime_fragment	FALSE	canonical	3	82	junction_1	17.1813852759316	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	6345	False	NA	NA	False	NA	NA	NA	155832489	155840820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
tx.12017	chr2	+	1325	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	52	0	-9	0	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	332	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	NA	False	NA	NA	NA	155850016	155860199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
tx.12018	chr2	+	1203	11	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	436	2	-138	0	3prime_fragment	FALSE	canonical	3	758	junction_2	58.9983898085363	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	NA	False	NA	NA	NA	155850400	155860197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
tx.12019	chr2	-	3495	17	FSM	ENSMUSG00000074643.13	ENSMUST00000109608.9	3492	17	0	-3	0	1	multi-exon	FALSE	canonical	3	55	junction_15	81.3740399328926	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGCCGCTCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	155953863	155913763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
tx.1202	chr1	-	3983	15	FSM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	12	0	-11	0	multi-exon	FALSE	canonical	3	29	junction_3	6.52154983457904	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCCTCATTTAATA	NA	False	NA	NA	False	NA	NA	NA	190643955	190505075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
tx.12020	chr2	-	3447	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	-5	-1	-1	1	multi-exon	FALSE	canonical	3	257	junction_15	28.8510350286124	281	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGCCGCTCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	155953864	155913763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
tx.12021	chr2	-	3541	17	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_15	70.9506595723394	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGCCGCTCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	155953877	155913763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945350_155953705
tx.12022	chr2	-	3342	16	NIC	ENSMUSG00000074643.13	novel	3441	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	83.2064634241569	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	NA	False	NA	NA	NA	155953880	155913764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953825
tx.12023	chr2	-	6592	3	NNC	ENSMUSG00000089824.11	novel	6667	3	NA	NA	203	-20	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	144.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGATGCTTTAATGCTTT	NA	False	NA	NA	False	NA	NA	NA	155953633	155933897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_155940293_155945268_155945350_155953517
tx.12024	chr2	-	3999	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	0	2668	0	-2668	multi-exon	FALSE	canonical	3	245	junction_2	24	230	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTTGGTTTGACCGCC	NA	False	NA	NA	False	NA	NA	NA	155953876	155936545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155940293_155945268_155945350_155953705
tx.12025	chr2	-	3943	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	18	2674	18	-2674	multi-exon	FALSE	canonical	3	132	junction_2	80.5	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACATTATTTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	155953858	155936551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155940293_155945268_155945318_155953705
tx.12026	chr2	-	2028	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	13	10	7	1	multi-exon	TRUE	canonical	3	228	junction_1	23.0952135493242	207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTCCTGATCCTTGA	3119	False	NA	NA	False	NA	NA	NA	155986093	155965568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
tx.12027	chr2	+	384	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	182	3	-12	0	multi-exon	FALSE	canonical	3	748	junction_1	118.5	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	6533	False	NA	NA	False	NA	NA	NA	155986140	155987714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_155986201_155986378_155986510_155987521
tx.12028	chr2	-	2756	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	46	8	4	-1	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	974	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAATTTTCGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	156022112	155989166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
tx.12029	chr2	-	2739	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	-26	-2	3	-1	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	809	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAATTTTCGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	156022113	155989166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
tx.1203	chr1	-	4219	14	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-11	329	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	11.9782840983518	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGTGTTTGTCACAC	NA	False	NA	NA	False	NA	NA	NA	190643955	190504746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
tx.12030	chr2	-	4902	14	ISM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	4648	10	1793	0	3prime_fragment	FALSE	canonical	3	1358	junction_5	352.084090950716	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	NA	NA	NA	156017510	155989168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747
tx.12031	chr2	+	5577	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	82.3578320501457	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	NA	False	NA	NA	NA	156038636	156151872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
tx.12032	chr2	+	5649	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	89	-1	-3	1	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	467	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	NA	False	NA	NA	NA	156038650	156151873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
tx.12033	chr2	+	5638	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	81.7586540291027	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	NA	False	NA	NA	NA	156038641	156151873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
tx.12034	chr2	-	600	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	202	1	202	-1	multi-exon	FALSE	canonical	3	384	junction_1	0	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGCTGTGTCTTGCGT	NA	False	NA	NA	False	NA	NA	NA	156154465	156153766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156154323_156154421
tx.12035	chr2	+	5905	21	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	20.7663188841932	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACCATGGACTCCCTC	7776	False	NA	NA	False	NA	NA	NA	156262963	156385128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
tx.12036	chr2	+	5876	21	NIC	ENSMUSG00000027624.21	novel	5904	21	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	31.2878171178496	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACCATGGACTCCCTCA	7782	False	NA	NA	False	NA	NA	NA	156262969	156385129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
tx.12037	chr2	+	5946	22	NIC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	40.1842694372323	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATGGACTCCCTCAGC	7774	False	NA	NA	False	NA	NA	NA	156262961	156385131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
tx.12038	chr2	+	6304	22	FSM	ENSMUSG00000027624.21	ENSMUST00000109577.9	6251	22	-67	14	-3	-12	multi-exon	FALSE	canonical	3	36	junction_14	33.5816600417023	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATGCTGAACCATGG	7777	False	NA	NA	False	NA	NA	NA	156262964	156385120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
tx.12039	chr2	+	5763	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11864	-9	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	33.6114191905073	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGCTGAACCATGGACT	NA	False	NA	NA	False	NA	NA	NA	156274895	156385123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
tx.1204	chr1	+	3172	9	FSM	ENSMUSG00000026634.17	ENSMUST00000110899.7	3673	9	38	463	38	-463	multi-exon	FALSE	canonical	3	10	junction_1	60.2136820000239	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATTTATTCCAGTTG	NA	False	NA	NA	False	NA	NA	NA	190660726	190678696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_190660915_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
tx.12040	chr2	+	2756	5	FSM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	12	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_2	64.1190299365173	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTGTGTGAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	156389515	156410078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156389804_156391804_156391948_156392568_156393370_156397746_156397977_156408784
tx.12041	chr2	+	2619	4	FSM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	-6	814	-6	2	multi-exon	FALSE	canonical	3	133	junction_3	2.16024689946929	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTGTGTGAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	156389509	156410078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156389804_156392568_156393370_156397746_156397977_156408784
tx.12042	chr2	+	4904	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	-56	3	-56	-1	multi-exon	FALSE	canonical	2	10	junction_1	158.364996833967	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGAGGCCTCATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	156455568	156606280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
tx.12043	chr2	+	4768	13	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	29663	-1	intron_retention	FALSE	canonical	1	3	junction_1	158.899579574299	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGAGGCCTCATGGTGTT	9362	False	NA	NA	False	NA	NA	NA	156485287	156606280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_156485362_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
tx.12044	chr2	+	2847	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	-16	-1236	-2	-1	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGAGGCCTCATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	156562948	156606280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
tx.12045	chr2	+	3812	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-414	4	8	-2	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACGAGGCCTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	156562997	156606279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
tx.12046	chr2	+	2996	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9358	-1	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGAGGCCTCATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	156572769	156606280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
tx.12047	chr2	+	2788	6	ISM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	24342	4	-14111	-2	3prime_fragment	FALSE	canonical	3	261	junction_2	50.6856981800586	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACGAGGCCTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	156587753	156606279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
tx.12048	chr2	-	3287	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	5	2343	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	66.2382064974588	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	156681715	156672625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_156675347_156675537_156675633_156679742_156679834_156680337_156680457_156681454
tx.12049	chr2	-	3266	4	FSM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	-51	-2341	21	2341	multi-exon	FALSE	canonical	3	47	junction_3	57.393379409127	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTTTCGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	156681791	156672627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156675347_156679742_156679834_156680337_156680457_156681454
tx.1205	chr1	+	3212	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	40	462	40	-462	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATTTATTCCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	190660728	190678697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
tx.12050	chr2	-	3065	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-30	2342	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	55.3915356550279	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	156681770	156672626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681635
tx.12051	chr2	-	4813	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-8	2339	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	66.6783323126786	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCTTTCGTGTT	NA	False	NA	NA	False	NA	NA	NA	156681728	156672629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_156676959_156679742_156679834_156680337_156680457_156681454
tx.12052	chr2	+	2854	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	46	0	46	0	multi-exon	FALSE	canonical	3	217	junction_2	7.5	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	156681972	156697490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156682159_156686075_156686302_156695048
tx.12053	chr2	+	2740	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	-53	3	40	-3	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAATTTTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	156681966	156697487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
tx.12054	chr2	+	2830	3	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-95	-2	intron_retention	FALSE	canonical	3	38	junction_1	89.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAATTTTTTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	156682846	156697488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_156683011_156686075_156686302_156695048
tx.12055	chr2	-	1370	3	NNC	ENSMUSG00000085741.9	novel	1196	3	NA	NA	-4	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGTGCTTGGCTTTATA	NA	False	NA	NA	False	NA	NA	NA	156704869	156694323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_156694611_156695350_156695939_156704374
tx.12056	chr2	+	1056	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	1149	junction_1	99.8031395631754	483	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGCATGCCTGGTA	4631	False	NA	NA	False	NA	NA	NA	156705036	156715483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
tx.12057	chr2	-	2613	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	-27	0	-27	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5887	False	NA	NA	False	NA	NA	NA	156834003	156769264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
tx.12058	chr2	-	2636	17	FSM	ENSMUSG00000027634.15	ENSMUST00000069600.13	2612	17	-24	0	-11	0	multi-exon	FALSE	canonical	3	9	junction_1	53.8324948335111	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5903	False	NA	NA	False	NA	NA	NA	156833987	156769264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156770802_156771851_156771891_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
tx.12059	chr2	-	2577	15	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_13	42.7715812574811	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5887	False	NA	NA	False	NA	NA	NA	156834003	156769264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156811956_156812059_156833918
tx.1206	chr1	+	2892	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	27	-469	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	62.1285697861577	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTACTCATTTATTC	NA	False	NA	NA	False	NA	NA	NA	190660715	190678690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_190660956_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
tx.12060	chr2	-	5538	9	ISM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	4	-2005	4	913	intron_retention	FALSE	canonical	3	177	junction_5	19.9421037004625	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCCTTCATTCAGAT	8138	False	NA	NA	False	NA	NA	NA	156848991	156835179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087
tx.12061	chr2	-	4074	11	FSM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	2	-1996	2	904	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATACTAGTTTTGCCTT	8136	False	NA	NA	False	NA	NA	NA	156848993	156835188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
tx.12062	chr2	-	4244	11	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	198	868	multi-exon	FALSE	canonical	2	4	junction_10	63.1497426756436	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATATAAAT	8377	False	NA	NA	False	NA	NA	NA	156848752	156835224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848447
tx.12063	chr2	-	4094	11	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	158	881	multi-exon	FALSE	canonical	3	10	junction_10	61.4528274369862	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATCATGTAATAAAAT	8337	False	NA	NA	False	NA	NA	NA	156848792	156835211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848650
tx.12064	chr2	-	4304	10	ISM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	22	-1145	22	53	intron_retention	FALSE	canonical	3	171	junction_9	21.9027029168029	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCCTCCATGTCATTAT	8156	False	NA	NA	False	NA	NA	NA	156848973	156836039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767
tx.12065	chr2	-	3000	11	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	-1	46	multi-exon	FALSE	canonical	3	8	junction_9	63.4460400655549	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAATTATGCCTCCATG	8133	False	NA	NA	False	NA	NA	NA	156848996	156836046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847193_156847767_156847794_156848894
tx.12066	chr2	-	4563	11	FSM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103130.8	2636	11	84	-2011	5	907	multi-exon	FALSE	canonical	3	12	junction_10	60.8885046622103	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTAGTTTTGCCTTCAT	8139	False	NA	NA	False	NA	NA	NA	156848990	156835185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848894
tx.12067	chr2	-	5877	11	ISM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	38771	-5	-244	5	3prime_fragment	FALSE	canonical	2	9	junction_5	4.4226688774992	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTATGTCTTGGTAA	4832	False	NA	NA	False	NA	NA	NA	156882403	156857713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746
tx.12068	chr2	-	7758	15	FSM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	106	0	106	0	multi-exon	FALSE	canonical	2	9	junction_5	3.79580864445326	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGCCTTTTATGTCTT	7625	False	NA	NA	False	NA	NA	NA	156921068	156857718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
tx.12069	chr2	-	3860	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	61	5	2	-5	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTAGTCTCTCGAGT	NA	False	NA	NA	False	NA	NA	NA	156977124	156939457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
tx.1207	chr1	+	3057	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-11	-460	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATTCCAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	190661031	190678699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
tx.12070	chr2	-	2075	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	-33	-6	-33	6	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCGGTTAGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	156977073	156941314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
tx.12071	chr2	-	4884	22	FSM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	-22	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	43.0171615808876	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTACTTTTTACTGCT	NA	False	NA	NA	False	NA	NA	NA	157046454	156987812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
tx.12072	chr2	-	2397	13	FSM	ENSMUSG00000027641.14	ENSMUST00000124518.2	2383	13	-9	-5	-1	5	multi-exon	FALSE	canonical	3	92	junction_1	21.3559450478992	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTATACATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	157046455	157016900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
tx.12073	chr2	+	2484	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	10	262	10	1	multi-exon	TRUE	canonical	3	1870	junction_1	194.730412606121	3222	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	157120988	157167977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
tx.12074	chr2	+	1091	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	16	0	16	0	multi-exon	FALSE	canonical	3	219	junction_1	136	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTGTTGCTACTG	5233	False	NA	NA	False	NA	NA	NA	157209529	157238683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_157209561_157220968_157221175_157237829
tx.12075	chr2	+	1062	2	ISM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	11453	0	11453	0	3prime_fragment	FALSE	canonical	3	491	junction_1	0	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTGTTGCTACTG	NA	False	NA	NA	False	NA	NA	NA	157220966	157238683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_157221175_157237829
tx.12076	chr2	+	4011	15	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2210	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	44.3039133112852	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	NA	False	NA	NA	NA	157262573	157313758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_157262723_157263520_157263636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
tx.12077	chr2	+	3919	14	FSM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	-37	24	-37	0	multi-exon	FALSE	canonical	3	53	junction_1	27.1024791983727	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	NA	False	NA	NA	NA	157266162	157313758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
tx.12078	chr2	-	2053	2	FSM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	3	0	3	0	multi-exon	FALSE	canonical	3	207	junction_1	0	284	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	NA	False	NA	NA	False	NA	NA	NA	157408254	157398281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_157400248_157408167
tx.12079	chr2	-	712	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	-83	0	83	multi-exon	FALSE	canonical	3	113	junction_1	0	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTGGTGGGAAGAAAGA	8707	False	NA	NA	False	NA	NA	NA	157439240	157437419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_157437906_157439014
tx.1208	chr1	+	3386	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	2	-460	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	58.9888760699846	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATTCCAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	190661044	190678699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_190661444_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
tx.12080	chr2	+	1884	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	38	520	38	-520	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	600	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGACATTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	157579358	157733014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
tx.12081	chr2	+	3300	3	NIC	ENSMUSG00000037843.7	novel	1363	4	NA	NA	-243	-2	intron_retention	FALSE	canonical	3	14	junction_1	1	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGGGCAGTGCCTTGCT	NA	False	NA	NA	False	NA	NA	NA	157756329	157786637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_157756852_157777244_157779162_157785776
tx.12082	chr2	+	1380	4	FSM	ENSMUSG00000037843.7	ENSMUST00000109523.2	1363	4	-19	2	-19	-2	multi-exon	FALSE	canonical	3	14	junction_1	2.49443825784929	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGGGCAGTGCCTTGCT	NA	False	NA	NA	False	NA	NA	NA	157756553	157786637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_157756852_157777244_157777415_157779110_157779162_157785776
tx.12083	chr2	-	3808	8	FSM	ENSMUSG00000027650.13	ENSMUST00000029179.11	3830	8	22	0	22	0	multi-exon	FALSE	canonical	3	173	junction_3	12.5746749055231	399	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	157870331	157823722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
tx.12084	chr2	-	3769	7	FSM	ENSMUSG00000027650.13	ENSMUST00000109522.2	3765	7	5	-9	5	0	multi-exon	FALSE	canonical	3	173	junction_3	11.8977121983832	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	157851277	157823722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938
tx.12085	chr2	-	5629	7	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	22	-1	intron_retention	FALSE	canonical	3	176	junction_6	11.066716867356	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATGAGAGATTTATTTC	NA	False	NA	NA	False	NA	NA	NA	157870331	157823723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_157824381_157834887_157834976_157835273_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
tx.12086	chr2	-	6288	8	NNC	ENSMUSG00000027650.13	novel	774	4	NA	NA	22	5632	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	65.2286402602728	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAAGCCTGTGCCCAGTG	NA	False	NA	NA	False	NA	NA	NA	157870331	157831567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_157834706_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
tx.12087	chr2	+	3631	7	FSM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	-235	887	-11	-887	multi-exon	FALSE	canonical	3	131	junction_3	20.3749573960018	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	157870405	157919240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
tx.12088	chr2	+	3626	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	-9	887	-9	-887	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	157870407	157919240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
tx.12089	chr2	-	3562	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	34	0	-9	0	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	477	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGCCTTGTCCTTT	8840	False	NA	NA	False	NA	NA	NA	157988322	157958321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
tx.1209	chr1	-	4074	10	FSM	ENSMUSG00000066595.10	ENSMUST00000085635.6	4040	10	-34	0	-34	0	multi-exon	FALSE	canonical	2	14	junction_1	7.45521608765167	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGTCCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	190758389	190738043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190753272_190753454_190757573
tx.12090	chr2	-	1841	9	ISM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	18	10329	18	614	5prime_fragment	FALSE	canonical	3	151	junction_4	21.3248681121361	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACTATTGTTCCACAAAA	8824	False	NA	NA	False	NA	NA	NA	157988338	157968650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
tx.12091	chr2	-	3157	3	ISM	ENSMUSG00000085385.8	ENSMUST00000141809.8	1553	6	1580	-1607	-1466	0	3prime_fragment	FALSE	canonical	3	94	junction_2	2	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCGTGAGTTCTT	9939	False	NA	NA	False	NA	NA	NA	158201850	158195619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_158197962_158199117_158199184_158201101
tx.12092	chr2	-	4090	5	FSM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	-20	-2063	0	-2	multi-exon	FALSE	canonical	3	64	junction_4	13.2193040664023	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTCTCGTGAGTTC	8327	False	NA	NA	False	NA	NA	NA	158203462	158195621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862_158202991_158203324
tx.12093	chr2	-	2957	6	FSM	ENSMUSG00000085385.8	ENSMUST00000133449.8	933	6	39	-2063	1	-2	multi-exon	FALSE	canonical	2	8	junction_3	32.8048776861003	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTCTCGTGAGTTC	8328	False	NA	NA	False	NA	NA	NA	158203461	158195621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_158197962_158199117_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
tx.12094	chr2	-	3036	6	NIC	ENSMUSG00000085385.8	novel	933	6	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.4059821413245	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTTGGTCTCGTGAGT	8348	False	NA	NA	False	NA	NA	NA	158203441	158195623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158202991_158203324
tx.12095	chr2	-	2346	4	ISM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	-20	15	0	5	intron_retention	FALSE	canonical	3	82	junction_3	6.79869268479038	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGCCTTTTAAATCTGT	8327	False	NA	NA	False	NA	NA	NA	158203462	158197699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862
tx.12096	chr2	+	5845	5	FSM	ENSMUSG00000044349.17	ENSMUST00000109488.8	5864	5	19	0	-4	0	multi-exon	FALSE	canonical	3	5	junction_4	1.92028643696715	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTCGGTCACATGTT	NA	False	NA	NA	False	NA	NA	NA	158217576	158228065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_158217809_158218000_158218247_158218913_158218993_158222690_158222772_158222858
tx.12097	chr2	+	5989	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	29	2365	1	-758	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGGTTTGAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	158251796	158338808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
tx.12098	chr2	+	5545	14	ISM	ENSMUSG00000027652.16	ENSMUST00000141497.2	7131	25	17582	161	-11759	-161	3prime_fragment	FALSE	canonical	3	86	junction_10	18.1551498879966	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTGTGTCCCTTGCTGC	NA	False	NA	NA	False	NA	NA	NA	158296055	158341012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
tx.12099	chr2	+	2394	9	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	6	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	46.3377545852192	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	158466813	158481126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_158467437_158468243_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
tx.121	chr1	+	4176	8	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	40.1512446753471	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGAATTGTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	33758963	33781640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_33759102_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
tx.1210	chr1	-	1210	10	FSM	ENSMUSG00000026632.18	ENSMUST00000110893.10	1242	10	16	16	-11	0	multi-exon	FALSE	canonical	2	9	junction_2	11.4309521329882	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATTTTTAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	190795113	190778038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
tx.12100	chr2	+	2601	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	21	-220	21	220	multi-exon	FALSE	canonical	0	0	junction_4	35.8634563309227	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAAGCCTTGCCAGAGA	NA	False	NA	NA	False	NA	NA	NA	158466828	158481351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
tx.12101	chr2	+	2355	9	NIC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	23	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	44.7960656754586	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	158466830	158481126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477946_158478068_158478587_158478721_158480552
tx.12102	chr2	+	2269	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	-4	1	-4	-1	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	456	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGATTCTTTTTGT	402	False	NA	NA	False	NA	NA	NA	158610008	158628556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
tx.12103	chr2	+	3231	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	53	0	-2	0	multi-exon	TRUE	canonical	3	62	junction_9	12.5862106454921	144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTCTCCTGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	158636779	158700134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
tx.12104	chr2	+	3762	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	91	3	-1	-3	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	806	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTAGCGTCTGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	160487898	160564681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
tx.12105	chr2	+	5202	33	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-28	7	combination_of_known_junctions	FALSE	canonical	3	165	junction_14	23.8978947817585	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTGTTTGTTTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	160573191	160605213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
tx.12106	chr2	+	5153	32	FSM	ENSMUSG00000016933.18	ENSMUST00000109462.8	5107	32	-38	-8	-4	8	multi-exon	FALSE	canonical	3	165	junction_13	22.7747418375012	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTTGTTTCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	160573614	160605214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
tx.12107	chr2	+	3419	20	FSM	ENSMUSG00000027412.13	ENSMUST00000040872.13	3458	20	38	1	-25	-1	multi-exon	TRUE	canonical	3	25	junction_3	8.54837950981163	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGAGAACCACGGTCCT	NA	False	NA	NA	False	NA	NA	NA	160730065	160747921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
tx.12108	chr2	-	4078	4	FSM	ENSMUSG00000050700.12	ENSMUST00000057169.5	3547	4	-26	-505	-26	504	multi-exon	FALSE	canonical	2	5	junction_1	5.55777733351102	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGTTTTGCTACTGT	NA	False	NA	NA	False	NA	NA	NA	160754274	160747852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_160751237_160751526_160751751_160752661_160752785_160753927
tx.12109	chr2	-	3926	4	FSM	ENSMUSG00000050700.12	ENSMUST00000109454.8	3396	4	-27	-503	-16	503	multi-exon	FALSE	canonical	2	7	junction_1	4.64279609239471	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTAGTTTTGCTACTG	NA	False	NA	NA	False	NA	NA	NA	160754264	160747853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_160751096_160751526_160751751_160752661_160752785_160753927
tx.1211	chr1	+	2976	6	FSM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	-13	1916	6	-1916	multi-exon	FALSE	canonical	3	202	junction_5	16.7164589551735	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTTACTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	190795214	190816755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367
tx.12110	chr2	-	5806	8	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-1795	12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	21.2430060519327	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAAAATTCAGATTTATA	8160	False	NA	NA	False	NA	NA	NA	160808511	160788885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160806677_160806715_160807088
tx.12111	chr2	-	10576	37	FSM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	-53	-8	0	8	multi-exon	TRUE	canonical	3	24	junction_8	18.6792285774042	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTTCAAAATTCAGATT	NA	False	NA	NA	False	NA	NA	NA	160950995	160788889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
tx.12113	chr2	-	5221	7	ISM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	142957	10	-1269	-10	3prime_fragment	FALSE	canonical	3	30	junction_6	9.46337971105226	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCCTGGATTTAAAAAGG	8686	False	NA	NA	False	NA	NA	NA	160807985	160788907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088
tx.12114	chr2	-	1161	7	ISM	ENSMUSG00000057133.15	ENSMUST00000138078.8	3092	17	-17	21806	-17	-1	5prime_fragment	FALSE	canonical	3	60	junction_4	13.7931142241337	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAAGGGTCTTCTATA	NA	False	NA	NA	False	NA	NA	NA	160951012	160871759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
tx.12115	chr2	+	3800	7	FSM	ENSMUSG00000016921.15	ENSMUST00000017065.15	1666	7	-43	-2091	-9	-4	multi-exon	FALSE	canonical	3	50	junction_2	407.538443994347	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACTTGTTCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	162773438	162779037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
tx.12116	chr2	+	3522	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	5	0	-5	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	1061	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGACTTGTTCTTCATT	NA	False	NA	NA	False	NA	NA	NA	162773447	162779036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
tx.12117	chr2	+	3363	5	ISM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	377	3	244	-3	3prime_fragment	FALSE	canonical	3	865	junction_1	54.5361118892794	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGTTCTTCATTTA	NA	False	NA	NA	False	NA	NA	NA	162773824	162779038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
tx.12118	chr2	+	3834	4	ISM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	1187	5	1054	-5	3prime_fragment	FALSE	canonical	3	867	junction_3	54.1376845541891	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGACTTGTTCTTCATT	NA	False	NA	NA	False	NA	NA	NA	162774634	162779036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_162775471_162775573_162775783_162776147_162776232_162776331
tx.12119	chr2	+	1637	5	ISM	ENSMUSG00000017868.17	ENSMUST00000018012.14	2693	14	11871	-9	1089	9	3prime_fragment	FALSE	canonical	3	12	junction_3	4.54835134966506	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGGTTGCCTCAACAC	NA	False	NA	NA	False	NA	NA	NA	162841120	162856056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_162841189_162845191_162845288_162846066_162846223_162848713_162848804_162854829
tx.1212	chr1	+	2922	7	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	-5	-1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.1517904045108	229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTTACTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	190795215	190816755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367_190815835_190815887
tx.12120	chr2	+	2717	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-79	1013	-79	976	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	5498	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	NA	NA	NA	162896527	162925595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
tx.12121	chr2	-	759	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1756	-2	multi-exon	FALSE	canonical	3	735	junction_1	0	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTCCGGGCTGTGCTGGTT	913	False	NA	NA	False	NA	NA	NA	162931531	162928955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_-_162929642_162931458
tx.12122	chr2	+	3417	3	NNC	ENSMUSG00000086152.2	novel	714	3	NA	NA	9	2393	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	1.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	162964534	162988272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_162964699_162982755_162983125_162985388
tx.12123	chr2	-	1606	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	13	1	13	-1	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTATTGTGTGTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	163261435	163247742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
tx.12124	chr2	-	3958	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	8	1	8	-1	multi-exon	FALSE	canonical	3	58	junction_1	0	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCGGAGTTTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	163314541	163308299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_163312039_163314322
tx.12125	chr2	+	4517	5	FSM	ENSMUSG00000017679.17	ENSMUST00000171696.8	4522	5	3	2	3	-2	multi-exon	FALSE	canonical	2	4	junction_1	8.69985632065266	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCATTGTGGTTTTTA	5694	False	NA	NA	False	NA	NA	NA	163444236	163460930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_163444335_163449128_163449595_163453678_163453873_163455654_163455766_163457282
tx.12126	chr2	+	4500	5	FSM	ENSMUSG00000017679.17	ENSMUST00000109408.10	1999	5	9	-2510	9	-2	multi-exon	FALSE	canonical	3	17	junction_1	3.8405728739343	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCATTGTGGTTTTTA	5708	False	NA	NA	False	NA	NA	NA	163444250	163460930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_163444335_163449131_163449595_163453678_163453873_163455654_163455766_163457282
tx.12127	chr2	-	2282	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	12	1389	6	-1389	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	331	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTTGTGTATTTG	NA	False	NA	NA	False	NA	NA	NA	163487039	163466580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
tx.12128	chr2	+	956	3	FSM	ENSMUSG00000035268.15	ENSMUST00000164399.8	983	3	21	6	-8	0	multi-exon	FALSE	canonical	3	64	junction_1	157.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTATGATCTTTTCT	8611	False	NA	NA	False	NA	NA	NA	163500326	163568072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_163500413_163563047_163563222_163567376
tx.12129	chr2	+	5183	3	FSM	ENSMUSG00000035268.15	ENSMUST00000147385.8	2808	3	20	-2395	7	1	multi-exon	FALSE	canonical	3	323	junction_1	34	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTATGATCTTTTCTT	8610	False	NA	NA	False	NA	NA	NA	163500325	163568073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_163500413_163545405_163545476_163563047
tx.1213	chr1	-	1978	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	6	0	6	0	multi-exon	FALSE	canonical	3	64	junction_2	6.37704215656966	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTAGTGTGGCACTGGTTT	NA	False	NA	NA	False	NA	NA	NA	190915531	190902492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
tx.12130	chr2	+	1032	4	FSM	ENSMUSG00000035268.15	ENSMUST00000064703.13	1036	4	3	1	3	1	multi-exon	FALSE	canonical	3	323	junction_1	29.6348143611905	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTATGATCTTTTCTT	8606	False	NA	NA	False	NA	NA	NA	163500321	163568073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_163500413_163545405_163545476_163563047_163563222_163567376
tx.12131	chr2	-	1445	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	13	230	13	-230	multi-exon	FALSE	canonical	3	45	junction_1	12.1526108476007	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCACATGGTGAAT	NA	False	NA	NA	False	NA	NA	NA	163592146	163568733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
tx.12132	chr2	+	2809	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	204	0	204	0	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	863	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	NA	False	NA	NA	False	NA	NA	NA	163837083	163860508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
tx.12133	chr2	-	1865	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	58	0	-9	0	multi-exon	FALSE	canonical	3	532	junction_3	35.0606617165164	806	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	5939	False	NA	NA	False	NA	NA	NA	163913031	163895459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
tx.12134	chr2	+	5232	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_9	12.953763931769	481	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCCCCTTTCTTCACA	NA	False	NA	NA	False	NA	NA	NA	163916057	163997444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
tx.12135	chr2	-	2457	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	1	0	-1	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTCAGTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	164285106	164266167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
tx.12136	chr2	+	1439	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	2	165	2	-165	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	143	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTCAACTGTGGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	164302892	164307263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
tx.12137	chr2	+	1701	9	FSM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	6	5	-5	-5	multi-exon	FALSE	canonical	3	60	junction_7	35.1212186576719	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACACATCACTGTTAATC	5133	False	NA	NA	False	NA	NA	NA	164339460	164345035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
tx.12138	chr2	+	855	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	-8	2	-8	-2	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGCTTGCCTCACTT	105	False	NA	NA	False	NA	NA	NA	164404490	164410428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
tx.12139	chr2	+	1117	8	ISM	ENSMUSG00000017299.14	ENSMUST00000109327.4	656	9	-27	1796	-10	205	5prime_fragment	FALSE	canonical	3	592	junction_6	60.090408076973	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATATAGTATTGTCCT	NA	False	NA	NA	False	NA	NA	NA	164587923	164601684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171
tx.1214	chr1	-	656	4	FSM	ENSMUSG00000037499.10	ENSMUST00000046770.10	742	4	86	0	86	0	multi-exon	FALSE	canonical	3	115	junction_1	10.5303793326209	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTGTATGGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	191050305	191038985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_191039287_191042115_191042220_191043656_191043718_191050115
tx.12140	chr2	+	1263	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	16	385	-15	-385	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	333	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAGTGAGCCTGCTATA	NA	False	NA	NA	False	NA	NA	NA	164587918	164610142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
tx.12141	chr2	+	962	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	1	4	1	-4	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	463	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTTTCTCAAGTTA	NA	False	NA	NA	False	NA	NA	NA	164611818	164614823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
tx.12142	chr2	+	2590	3	FSM	ENSMUSG00000050373.14	ENSMUST00000172577.8	1825	3	-9	-756	-9	0	multi-exon	FALSE	canonical	3	11	junction_2	7.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTTGTGGAGTCTGGG	NA	False	NA	NA	False	NA	NA	NA	164627901	164635728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164628245_164628617_164628769_164633632
tx.12143	chr2	-	5234	3	NIC	ENSMUSG00000017307.17	novel	1017	5	NA	NA	-7	1823	intron_retention	FALSE	canonical	3	55	junction_2	148	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGCCTCTTCAATTCT	8219	False	NA	NA	False	NA	NA	NA	164646749	164632861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_164637730_164641639_164641866_164646609
tx.12144	chr2	-	1123	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	28	1	27	-1	multi-exon	TRUE	canonical	3	284	junction_4	26.9250812440743	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTGACCTTTAATAGA	8194	False	NA	NA	False	NA	NA	NA	164646774	164634688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
tx.12145	chr2	+	2374	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	329	2	2	-2	multi-exon	FALSE	canonical	3	571	junction_1	0	868	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCGTGTCTTGTCTGGTT	8856	False	NA	NA	False	NA	NA	NA	164664934	164668789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164665121_164666601
tx.12146	chr2	-	1054	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	-40	0	-40	0	multi-exon	FALSE	canonical	3	37	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGAGGGTCTCCTTGC	NA	False	NA	NA	False	NA	NA	NA	164675416	164672651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_164672908_164674618
tx.12147	chr2	+	1820	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	905	1448	-1	-435	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	1000	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	NA	False	NA	NA	NA	164675725	164681504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
tx.12148	chr2	-	1913	15	FSM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	310	3	310	-3	multi-exon	FALSE	canonical	3	336	junction_14	23.0625812315366	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	NA	False	NA	NA	NA	164699152	164681440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
tx.12149	chr2	-	1796	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	11	2	11	-2	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGGTTTCTCTAGCTC	NA	False	NA	NA	False	NA	NA	NA	164699620	164681439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
tx.1215	chr1	+	2232	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	17	-3	17	3	multi-exon	TRUE	canonical	3	75	junction_7	21.6248156769306	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTACCTTTGTCTCAC	NA	False	NA	NA	False	NA	NA	NA	191058125	191083114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
tx.12150	chr2	+	2690	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	13	3077	13	-3077	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGAGGGTCTTGGGGC	5962	False	NA	NA	False	NA	NA	NA	164721289	164733297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
tx.12151	chr2	+	509	2	FSM	ENSMUSG00000039849.7	ENSMUST00000145327.2	611	2	66	36	13	-36	multi-exon	FALSE	canonical	3	441	junction_1	0	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGATGTCGTTAACAAC	5962	False	NA	NA	False	NA	NA	NA	164721289	164725083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164721410_164724694
tx.12152	chr2	-	4426	28	FSM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	159	2	159	-2	multi-exon	TRUE	canonical	3	65	junction_13	19.1818958999235	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCTTTGTATATGTGC	NA	False	NA	NA	False	NA	NA	NA	164753518	164733803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
tx.12153	chr2	-	4632	27	ISM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	589	10	589	-10	3prime_fragment	FALSE	canonical	3	65	junction_13	19.3627776871841	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	164753088	164733811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541
tx.12154	chr2	-	3154	8	FSM	ENSMUSG00000039804.16	ENSMUST00000122070.2	3117	8	-31	-6	-2	0	multi-exon	TRUE	canonical	3	14	junction_1	35.3784207259344	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAATCTTTCTTGG	3030	False	NA	NA	False	NA	NA	NA	164876739	164842276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
tx.12155	chr2	-	3128	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	49	2	-1	1	multi-exon	FALSE	canonical	3	73	junction_1	19.1790702249582	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGCTAATCTTTCTT	3031	False	NA	NA	False	NA	NA	NA	164876738	164842278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
tx.12156	chr2	-	2074	6	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	92540	2	39146	-2	3prime_fragment	FALSE	canonical	2	10	junction_5	4.63033476111609	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTATCCTTGTGGTTA	NA	False	NA	NA	False	NA	NA	NA	164984233	164953428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973
tx.12157	chr2	-	1924	9	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	4150	0	-5	0	3prime_fragment	TRUE	canonical	3	229	junction_4	16.0657827384787	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	9924	False	NA	NA	False	NA	NA	NA	165125525	165118473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168
tx.12158	chr2	-	1958	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	50	0	5	0	multi-exon	FALSE	canonical	3	110	junction_9	47.7596864973064	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5710	False	NA	NA	False	NA	NA	NA	165129739	165118473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
tx.12159	chr2	-	3500	22	FSM	ENSMUSG00000017670.17	ENSMUST00000074046.13	3502	22	2	0	2	0	multi-exon	TRUE	canonical	1	2	junction_12	97.9880829442692	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	NA	False	NA	NA	NA	165168397	165131074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
tx.1216	chr1	-	3097	13	FSM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	-10	1	-10	-1	multi-exon	FALSE	canonical	3	325	junction_3	33.6760506723827	700	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTGCTCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	191129248	191084172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
tx.12160	chr2	-	3464	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	2	0	2	0	multi-exon	FALSE	canonical	3	269	junction_20	30.5759300757965	579	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	NA	False	NA	NA	NA	165168397	165131074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
tx.12161	chr2	-	5082	5	FSM	ENSMUSG00000017667.10	ENSMUST00000103084.4	8205	5	-48	3171	-48	-3171	multi-exon	FALSE	canonical	3	23	junction_1	3.24037034920393	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTGTGAGACTTTTAC	4492	False	NA	NA	False	NA	NA	NA	165230227	165219354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_165223807_165224610_165224704_165225158_165225286_165228845_165228909_165229880
tx.12162	chr2	-	5114	5	NNC	ENSMUSG00000017667.10	novel	8205	5	NA	NA	-48	-3172	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	10.1827059272082	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGTGAGACTTTTA	4492	False	NA	NA	False	NA	NA	NA	165230227	165219355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_165223807_165224610_165224704_165225158_165225319_165228845_165228909_165229880
tx.12163	chr2	-	1892	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	-14	2	-14	-2	multi-exon	FALSE	canonical	3	240	junction_1	0	192	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTTCGGAGACCTGGAA	NA	False	NA	NA	False	NA	NA	NA	165335258	165332031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_165333632_165334966
tx.12164	chr2	+	3421	5	FSM	ENSMUSG00000027661.5	ENSMUST00000029196.5	3544	5	118	5	118	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCATATGGTGATTTATA	NA	False	NA	NA	False	NA	NA	NA	165345824	165361832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_165345969_165356345_165357618_165358152_165358276_165359536_165359673_165360086
tx.12165	chr2	+	2465	16	FSM	ENSMUSG00000017897.19	ENSMUST00000088132.13	2447	16	-12	-6	-12	-2	multi-exon	FALSE	canonical	0	0	junction_1	2.44040069569642	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGCTTCAGTGAAGTGG	NA	False	NA	NA	False	NA	NA	NA	165436939	165613645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_165437185_165506705_165506807_165524756_165524803_165527468_165527612_165529538_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165596360_165596451_165603823_165603883_165605616_165605778_165608134_165608250_165608956_165609079_165611144_165611246_165612953
tx.12166	chr2	-	4434	20	NIC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	35	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.691674028171	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	165740901	165626073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
tx.12167	chr2	-	2394	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-51	25	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	175.668828168468	49	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAGAGCTT	NA	False	NA	NA	False	NA	NA	NA	165726619	165669076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_165669638_165669852_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
tx.12168	chr2	-	2328	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	25	-3	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	164.953988074912	124	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTAAGAATGGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	165740911	165669051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_165669638_165669852_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
tx.12169	chr2	+	5755	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	-4	6	-4	-6	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	NA	False	NA	NA	False	NA	NA	NA	165834551	165913384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
tx.1217	chr1	-	4067	4	ISM	ENSMUSG00000037474.14	ENSMUST00000195650.6	4230	16	26099	12	26089	-3	3prime_fragment	FALSE	canonical	3	469	junction_1	31.8991466273873	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTTGTGGAAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	191281534	191269479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407
tx.12170	chr2	+	5754	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	0	1777	0	-5	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTAGCCCACTCATCA	NA	False	NA	NA	False	NA	NA	NA	165834556	165913385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
tx.12171	chr2	-	3887	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	47	-7	47	1	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	1533	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	165997158	165915832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
tx.12173	chr2	-	1644	2	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTTGGTCATAGTGT	NA	False	NA	NA	False	NA	NA	NA	166096640	166094481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_-_166095994_166096508
tx.12174	chr2	-	2792	4	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	59	1	intron_retention	FALSE	canonical	3	17	junction_3	8.52447456836295	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCATTCTTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	166349932	166341959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166349807
tx.12175	chr2	-	6513	40	FSM	ENSMUSG00000039621.14	ENSMUST00000036719.12	6533	40	18	2	18	-2	multi-exon	FALSE	canonical	3	38	junction_37	7.40390997863488	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTGTGGCCTGCTTG	NA	False	NA	NA	False	NA	NA	NA	166555734	166408263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
tx.12176	chr2	+	1597	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	9	2820	9	770	multi-exon	FALSE	canonical	3	131	junction_1	0	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACATCTTTTAATATTT	NA	False	NA	NA	False	NA	NA	NA	166635695	166638605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_166635989_166637301
tx.12177	chr2	+	8813	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-53	10	-53	-10	multi-exon	TRUE	canonical	3	156	junction_4	19.7687636593819	226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	NA	NA	NA	166647454	166739962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
tx.12178	chr2	+	3639	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-11	13	8	-13	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	1367	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACTCAGAATGGTGGT	NA	False	NA	NA	False	NA	NA	NA	166747967	166788296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
tx.12179	chr2	-	2951	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	21	597	8	1	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTCTTTTTCCAATTG	NA	False	NA	NA	False	NA	NA	NA	166838177	166790065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
tx.1218	chr1	-	4208	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	2	2	2	-2	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	1067	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGTGGAAGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	191307654	191269478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
tx.12180	chr2	-	2972	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	7	-3	7	3	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTTTTCCAATTGAG	NA	False	NA	NA	False	NA	NA	NA	166838178	166790063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
tx.12181	chr2	+	2617	21	FSM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	93	4	-24	-4	multi-exon	FALSE	canonical	3	666	junction_12	71.8993045863449	1110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAAGCCTGTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	166857205	166876863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
tx.12182	chr2	+	2175	8	FSM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	-24	0	-24	0	multi-exon	FALSE	canonical	3	722	junction_7	28.1497453499193	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAGTATTATTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	166857205	166867733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
tx.12183	chr2	-	6917	14	FSM	ENSMUSG00000039501.15	ENSMUST00000048988.14	7218	14	301	0	2	0	multi-exon	FALSE	canonical	3	14	junction_7	5.9245752350676	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCATCTCTTATCTGT	1261	False	NA	NA	False	NA	NA	NA	166904634	166877712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904429
tx.12184	chr2	-	7136	14	NIC	ENSMUSG00000039501.15	novel	7218	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	7.80911317120645	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCATCTCTTATCTGT	958	False	NA	NA	False	NA	NA	NA	166904937	166877712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904513
tx.12185	chr2	+	447	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	287	4	0	-4	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGCTGTGTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	166905140	166907778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
tx.12186	chr2	+	259	3	ISM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	2246	2	1947	-2	3prime_fragment	FALSE	canonical	3	933	junction_1	1	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCTGTGTCTTGAGTT	632	False	NA	NA	False	NA	NA	NA	166907099	166907780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_166907138_166907353_166907401_166907606
tx.12187	chr2	-	1120	6	ISM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	19236	287	-12952	-287	3prime_fragment	FALSE	canonical	3	46	junction_5	14.8404851672713	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	NA	False	NA	NA	False	NA	NA	NA	167063288	167045113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128
tx.12188	chr2	-	1862	10	FSM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	-42	287	-42	-287	multi-exon	FALSE	canonical	3	9	junction_8	29.1890390386528	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	5205	False	NA	NA	False	NA	NA	NA	167082566	167045113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
tx.12189	chr2	-	4238	9	FSM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	-28	0	-28	0	multi-exon	FALSE	canonical	3	218	junction_3	15.1244834622542	329	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTAGTCGTCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	167191131	167140363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
tx.1219	chr1	+	4219	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	114	1014	8	-72	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	371	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8307	False	NA	NA	False	NA	NA	NA	191307861	191354786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
tx.12190	chr2	-	4287	2	NIC	ENSMUSG00000047030.16	novel	4012	3	NA	NA	-5	34	intron_retention	FALSE	canonical	3	52	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTCATGGTGTTAC	4619	False	NA	NA	False	NA	NA	NA	167334770	167323318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_167327514_167334678
tx.12191	chr2	-	3737	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	9	266	0	34	multi-exon	FALSE	canonical	3	52	junction_2	1	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTCATGGTGTTAC	4591	False	NA	NA	False	NA	NA	NA	167334798	167323318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_167326500_167327077_167327514_167334678
tx.12192	chr2	+	2148	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	348	6	-9	1	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	842	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGCTGCAATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	167345356	167358087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
tx.12193	chr2	+	5587	5	NIC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	-2	2	intron_retention	FALSE	canonical	3	578	junction_1	25.5575331360443	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGCTGCAATGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	167345363	167358088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
tx.12194	chr2	-	1737	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	97	207	-11	-1	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	1906	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCGGTGGTTTTATTTTA	9415	False	NA	NA	False	NA	NA	NA	167473918	167449764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
tx.12195	chr2	-	2347	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	-18	0	-18	0	multi-exon	FALSE	canonical	3	221	junction_2	14.6205335059977	268	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTATTATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	167503494	167484527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
tx.12196	chr2	-	2919	5	ISM	ENSMUSG00000089739.3	ENSMUST00000125544.3	2367	8	-56	34745	-56	-34745	5prime_fragment	FALSE	canonical	3	221	junction_1	16.0214699700121	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTTGTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	167503472	167484514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
tx.12197	chr2	+	4186	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	19	8	19	-8	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACACAGGCGTGATGT	1079	False	NA	NA	False	NA	NA	NA	167774265	167821297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
tx.12198	chr2	+	4305	10	FSM	ENSMUSG00000027540.14	ENSMUST00000126839.8	4292	10	-21	8	-21	-8	multi-exon	FALSE	canonical	1	2	junction_2	47.9021636666927	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACACAGGCGTGATGT	1084	False	NA	NA	False	NA	NA	NA	167774270	167821297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_167774477_167793875_167794000_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
tx.12199	chr2	+	3435	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	-38	2	-38	-2	multi-exon	FALSE	canonical	3	144	junction_1	5.5	418	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTGTTTGAAATTA	NA	False	NA	NA	False	NA	NA	NA	167922885	167943121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_167923280_167929261_167929485_167940303
tx.122	chr1	-	1784	4	NNC	ENSMUSG00000042215.9	novel	1860	3	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.2968437932844	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGCATTGGCCATTAT	NA	False	NA	NA	False	NA	NA	NA	33796844	33784564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_33785227_33785270_33786098_33787297_33787408_33796659
tx.1220	chr1	+	7100	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	128	5	-65	-5	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATTGGGTGGCCTTGTT	NA	False	NA	NA	False	NA	NA	NA	191450073	191516362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
tx.12200	chr2	-	1310	2	FSM	ENSMUSG00000087648.2	ENSMUST00000129713.2	1309	2	1	-2	1	2	multi-exon	FALSE	canonical	3	24	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTAGCTACTTTATTTG	7130	False	NA	NA	False	NA	NA	NA	167996432	167994520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_167995672_167996273
tx.12201	chr2	-	4947	4	FSM	ENSMUSG00000051149.16	ENSMUST00000088001.6	4932	4	-17	2	-17	-2	multi-exon	FALSE	canonical	3	112	junction_3	29.1699998095456	304	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGCTTTTATTACAC	2900	False	NA	NA	False	NA	NA	NA	168049049	168022907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493
tx.12202	chr2	-	1044	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	16	1233	-1	0	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	NA	False	NA	NA	NA	168072283	168052200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
tx.12203	chr2	-	3683	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	46	0	46	0	multi-exon	TRUE	canonical	3	71	junction_27	47.3339708993171	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	168576213	168476357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
tx.12204	chr2	-	3717	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109176.8	3691	28	-26	0	-24	0	multi-exon	FALSE	canonical	3	157	junction_27	35.3190436202576	408	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6435	False	NA	NA	False	NA	NA	NA	168583908	168476357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
tx.12205	chr2	-	3455	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109177.8	3456	28	1	0	1	0	multi-exon	FALSE	canonical	2	6	junction_27	57.8025587882503	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6291	False	NA	NA	False	NA	NA	NA	168584052	168476357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168584007
tx.12206	chr2	-	4466	3	ISM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	10715	3	-543	-3	3prime_fragment	FALSE	canonical	3	593	junction_2	26	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	3356	False	NA	NA	False	NA	NA	NA	168598406	168590254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_168592381_168594373_168594661_168596353
tx.12207	chr2	-	5120	4	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-187	-3	intron_retention	FALSE	canonical	3	69	junction_3	260.140133176119	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	168607353	168590254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_168592381_168594373_168594661_168596353_168598721_168607013
tx.12208	chr2	-	5030	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	40	3	40	-3	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	841	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	168609081	168590254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
tx.12209	chr2	-	2041	5	NIC	ENSMUSG00000027551.16	novel	2848	9	NA	NA	24	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	9.69535971483266	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGATGTGAGCGTCATT	NA	False	NA	NA	False	NA	NA	NA	168754529	168735253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168754153
tx.1221	chr1	+	5873	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110856.8	2792	8	-95	-2986	-95	-1292	multi-exon	FALSE	canonical	3	42	junction_1	20.3610271983372	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGCTTTTAATTCT	NA	False	NA	NA	False	NA	NA	NA	191450405	191515075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
tx.12210	chr2	-	2486	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-50	2	-33	-2	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	703	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTGTATTGTATAGT	NA	False	NA	NA	False	NA	NA	NA	168797242	168767282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
tx.12211	chr2	+	828	2	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTTGTTTTTCTAGAT	NA	False	NA	NA	False	NA	NA	NA	168798266	168800168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_168798567_168799640
tx.12212	chr2	+	2486	2	Genic_Genomic	ENSMUSG00000052368.3	novel	1361	1	NA	NA	-14029	-9	multi-exon	FALSE	canonical	3	17	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCCATTTCTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	168847915	168863296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_+_168848074_168860968
tx.12213	chr2	-	5681	6	FSM	ENSMUSG00000052056.15	ENSMUST00000063710.13	5685	6	2	2	2	1	multi-exon	FALSE	canonical	3	10	junction_5	10.6695829346793	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCGTGGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	169973138	169950564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169972967
tx.12214	chr2	-	3357	3	ISM	ENSMUSG00000052056.15	ENSMUST00000063710.13	5685	6	15951	0	15951	0	3prime_fragment	FALSE	canonical	3	35	junction_1	1.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCGTGGTTTTCATT	5996	False	NA	NA	False	NA	NA	NA	169957189	169950562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_169952576_169954399_169954535_169955980
tx.12215	chr2	-	5006	5	ISM	ENSMUSG00000052056.15	ENSMUST00000063710.13	5685	6	10972	1	10972	-1	3prime_fragment	FALSE	canonical	3	18	junction_4	7.63216876123687	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCGTGGTTTTCAT	8412	False	NA	NA	False	NA	NA	NA	169962168	169950563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938
tx.12216	chr2	-	1328	3	FSM	ENSMUSG00000013523.14	ENSMUST00000152461.2	371	3	-14	-943	-14	-2	multi-exon	FALSE	canonical	3	30	junction_2	23.5	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGAGGTGGTTTTTTTT	4132	False	NA	NA	False	NA	NA	NA	170191729	170189065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_170190069_170191101_170191384_170191686
tx.12217	chr2	-	1422	3	FSM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-41	-787	14	0	multi-exon	FALSE	canonical	3	10	junction_2	33.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGGTGGTTTTTTTTTT	4160	False	NA	NA	False	NA	NA	NA	170191701	170189063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_170190069_170191101_170191384_170191566
tx.12218	chr2	-	1603	2	ISM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-41	-785	14	-2	intron_retention	FALSE	canonical	3	77	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGAGGTGGTTTTTTTT	4160	False	NA	NA	False	NA	NA	NA	170191701	170189065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_170190069_170191101
tx.12219	chr2	+	5666	2	NIC	ENSMUSG00000052033.14	novel	816	4	NA	NA	-25	0	intron_retention	FALSE	canonical	3	873	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCTCTATATTATTAT	4027	False	NA	NA	False	NA	NA	NA	170353339	170360987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_170358611_170360592
tx.1222	chr1	+	3162	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	64	1	-2	-1	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	890	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	NA	False	NA	NA	NA	191553619	191565161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
tx.12220	chr2	+	678	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	202	55	-8	1	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4044	False	NA	NA	False	NA	NA	NA	170353356	170360988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
tx.12221	chr2	-	553	3	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_2	1.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	170515761	170512873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_-_170513139_170515342_170515518_170515648
tx.12222	chr2	+	3586	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	29	2	29	-2	multi-exon	FALSE	canonical	3	138	junction_1	7.5	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGGTCTGCCGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	172187513	172197667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_172187768_172193374_172193545_172194505
tx.12223	chr2	+	1194	4	NNC	ENSMUSG00000027495.5	novel	3617	3	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	65.576079649688	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTCTGCCGTCTGGTAA	NA	False	NA	NA	False	NA	NA	NA	172187517	172197669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_172187768_172193374_172193545_172194505_172194765_172197154
tx.12224	chr2	-	1845	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	10	7	-4	-1	multi-exon	FALSE	canonical	3	1025	junction_8	140.198965759381	1297	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	False	NA	NA	False	NA	NA	NA	172212445	172198116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
tx.12225	chr2	+	5678	5	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	-4	-12	intron_retention	FALSE	canonical	3	132	junction_1	114.73120761153	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAACAGTGACGTGACG	NA	False	NA	NA	False	NA	NA	NA	172212596	172224356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535
tx.12226	chr2	+	3324	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	-3	-12	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAACAGTGACGTGACG	NA	False	NA	NA	False	NA	NA	NA	172212597	172224356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
tx.12227	chr2	+	4207	5	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	232	1365	232	-1365	intron_retention	FALSE	canonical	3	206	junction_1	83.4056353012193	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCCTCCTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	172212885	172223003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535
tx.12228	chr2	+	3225	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	223	3	223	-3	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACGTGACGTAAAGGTAG	NA	False	NA	NA	False	NA	NA	NA	172212876	172224365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
tx.12229	chr2	+	3157	5	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	2194	1	2194	-1	3prime_fragment	FALSE	canonical	3	339	junction_4	31.0352622028556	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGACGTAAAGGTAGTT	NA	False	NA	NA	False	NA	NA	NA	172214847	172224367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
tx.1223	chr1	+	3139	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	134.022233915397	164	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	NA	False	NA	NA	NA	191553621	191565161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
tx.12230	chr2	+	2153	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	18	2	18	-2	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	303	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGGGGTTGGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	172282493	172311826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
tx.12231	chr2	+	2692	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	-3954	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	238.451078141129	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	NA	False	NA	NA	NA	172387558	172400537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_172387708_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
tx.12232	chr2	+	2833	7	FSM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	0	5	0	-2	multi-exon	FALSE	canonical	3	551	junction_1	51.676611946046	987	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	NA	False	NA	NA	NA	172391512	172400537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
tx.12233	chr2	+	3221	6	ISM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	1136	5	-35	-2	3prime_fragment	FALSE	canonical	3	564	junction_3	44.2113107699828	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	NA	False	NA	NA	NA	172392648	172400537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
tx.12234	chr2	+	2773	7	FSM	ENSMUSG00000028640.12	ENSMUST00000170744.2	2776	7	1	2	1	-2	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	NA	False	NA	NA	NA	172392911	172400537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
tx.12235	chr2	-	2246	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	-247	1671	-247	-1671	multi-exon	TRUE	canonical	3	82	junction_3	13.8734358477712	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACGTTACAGATATAT	NA	False	NA	NA	False	NA	NA	NA	172782361	172711475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
tx.12236	chr2	+	1659	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	24	59	17	-59	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	992	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	NA	False	NA	NA	NA	172841933	172857473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
tx.12237	chr2	+	1750	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	27	-9	16	0	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	834	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	172863721	172876527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
tx.12238	chr2	+	2270	3	FSM	ENSMUSG00000027510.18	ENSMUST00000155512.8	2281	3	17	-6	17	0	multi-exon	FALSE	canonical	3	757	junction_2	26	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	172863722	172876527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_172864709_172865119_172865175_172875298
tx.12239	chr2	-	2200	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	-24	2362	-24	1226	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTTTTTTTTTTTTTC	1058	False	NA	NA	False	NA	NA	NA	173118350	173068612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
tx.1224	chr1	+	5267	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	-45	22	-45	-22	multi-exon	FALSE	canonical	3	88	junction_1	0	184	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAACTAATTCTAAT	NA	False	NA	NA	False	NA	NA	NA	191638833	191645337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_191639726_191640962
tx.12240	chr2	+	1916	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	82	5157	-14	1032	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTAGTCCTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	173501634	173543979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
tx.12241	chr2	+	2131	6	FSM	ENSMUSG00000027519.11	ENSMUST00000142820.8	7045	6	87	4827	-9	1334	multi-exon	FALSE	canonical	3	18	junction_2	72.9191332916128	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCCTGGCCTAATTTG	NA	False	NA	NA	False	NA	NA	NA	173501639	173544281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_173501935_173503224_173503305_173536902_173536975_173537051_173537159_173537682_173537793_173542814
tx.12242	chr2	+	1998	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	52	4982	52	1232	multi-exon	FALSE	canonical	3	50	junction_2	5.74804314527997	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTTGTCATTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	173579355	173621150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
tx.12243	chr2	+	3726	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	38.2914399703119	6	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCAGCATTCCTAGTAT	NA	False	NA	NA	False	NA	NA	NA	173918102	173941561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_173918176_173918916_173918988_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.12244	chr2	+	4351	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-109	intron_retention	FALSE	non_canonical	0	0	junction_1	33.4566426704102	27	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTTTTTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	173918111	173941454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_173918988_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.12245	chr2	+	4410	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	33.4566426704102	35	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATCCAGCATTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	173918111	173941559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_173918936_173932407_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.12246	chr2	+	4402	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	30	junction_1	23.5554058096468	47	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCAGCATTCCTAGTAT	NA	False	NA	NA	False	NA	NA	NA	173918111	173941561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_173918932_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.12247	chr2	+	4926	7	ISM	ENSMUSG00000027522.16	ENSMUST00000044638.13	3731	9	12116	105	12108	-105	3prime_fragment	FALSE	canonical	3	83	junction_1	10.0567832276971	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	173930966	173941458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.12248	chr2	+	7198	6	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	10686	-8	intron_retention	FALSE	canonical	3	84	junction_2	10.1311401135312	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCATCCAGCATTCC	NA	False	NA	NA	False	NA	NA	NA	173929544	173941555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.12249	chr2	+	2101	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	-2	368	-2	0	multi-exon	FALSE	canonical	3	214	junction_9	24.2330284822489	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	173952139	173964495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
tx.1225	chr1	-	2246	11	FSM	ENSMUSG00000026637.15	ENSMUST00000195815.3	2214	11	-30	-2	-30	0	multi-exon	FALSE	canonical	1	2	junction_6	1.02469507659596	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGGGCTCCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	191776898	191729165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_191729969_191731758_191731928_191733717_191733859_191738764_191738858_191741554_191741630_191742389_191742468_191743409_191743575_191746941_191747044_191751193_191751252_191754716_191754936_191776555
tx.12250	chr2	+	2377	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	237	junction_8	19.4907670449369	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	173952143	173964495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
tx.12251	chr2	-	2995	3	Antisense	novelGene_ENSMUSG00000027523.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_2	2	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCCCTCTAGATTG	530	False	NA	NA	False	NA	NA	NA	174169175	174163257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_174165759_174167686_174167944_174168938
tx.12252	chr2	-	1557	4	Antisense	novelGene_ENSMUSG00000027523.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	3.2659863237109	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCCCTCTAGATTG	502	False	NA	NA	False	NA	NA	NA	174169203	174163257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_174163991_174165456_174165759_174167686_174167944_174168938
tx.12253	chr2	+	1795	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	-47	-32	21	0	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	559	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	174171834	174188537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
tx.12254	chr2	+	2249	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	30	0	-17	0	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	648	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	174257626	174269295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
tx.12255	chr2	-	1389	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	51	1	51	-1	multi-exon	FALSE	canonical	3	493	junction_4	13.5292276202302	442	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGTGTACTTTATTTAC	5380	False	NA	NA	False	NA	NA	NA	174280781	174269286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
tx.12256	chr2	-	401	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	17	3	1	0	multi-exon	FALSE	canonical	0	0	junction_1	1326.5	422	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	174305881	174302867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_174303015_174304292_174304423_174305757
tx.12257	chr2	-	1431	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	111	11	-36	-11	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	620	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACTGAGACAGAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	174314763	174306870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
tx.12258	chr2	-	4963	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-37	-3015	-37	2380	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174983842	174968905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
tx.12259	chr2	-	4509	4	FSM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	7	0	7	0	multi-exon	FALSE	canonical	3	92	junction_1	16.3571255285137	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175017657	175008047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_175012254_175013387_175013449_175013640_175013768_175017542
tx.1226	chr1	-	4055	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	26	-2237	-1	-4	multi-exon	FALSE	canonical	3	28	junction_1	6.62077871128477	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAACGAAAAAGTATT	NA	False	NA	NA	False	NA	NA	NA	191822333	191782849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
tx.12260	chr2	-	4634	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	7	-2787	7	-1062	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048703	175033919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
tx.12261	chr2	+	1409	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	45	-9	19	9	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGCTCTGTTCAATGAAA	NA	False	NA	NA	False	NA	NA	NA	175661056	175671458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
tx.12262	chr2	-	4471	5	FSM	ENSMUSG00000078880.11	ENSMUST00000108990.9	1628	5	-57	-2786	-31	2786	multi-exon	FALSE	canonical	2	5	junction_1	103.562481140614	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176328168	176311848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_176315941_176317097_176317159_176317363_176317491_176324514_176324570_176328032
tx.12263	chr2	-	4465	5	NIC	ENSMUSG00000078881.11	novel	1497	4	NA	NA	-14	2788	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	106.190865897214	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176178590	176162282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_176166377_176167533_176167595_176167799_176167927_176174950_176175006_176178462
tx.12264	chr2	+	6519	4	FSM	ENSMUSG00000078898.10	ENSMUST00000109047.3	1480	4	-7	-5032	-7	4034	multi-exon	FALSE	canonical	3	11	junction_3	13.8884444373331	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	175214277	175230028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_175214367_175222239_175222367_175222572_175222634_175223786
tx.12265	chr2	+	1272	3	FSM	ENSMUSG00000089951.9	ENSMUST00000127687.8	1127	3	-62	-83	5	83	multi-exon	FALSE	canonical	3	22	junction_2	45	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCCCATTTCATGTA	NA	False	NA	NA	False	NA	NA	NA	176115391	176124962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_176115528_176123621_176123749_176123953
tx.12266	chr2	+	1469	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	32	-56	6	56	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCATCAGTATAA	NA	False	NA	NA	False	NA	NA	NA	175661043	175671505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
tx.12267	chr2	+	4638	5	NIC	ENSMUSG00000078887.11	novel	599	6	NA	NA	1	2785	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	79.6649232724164	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175661038	175675826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349_175670411_175671567
tx.12268	chr2	+	1450	4	FSM	ENSMUSG00000078875.11	ENSMUST00000156844.8	752	4	-59	-639	-38	168	multi-exon	FALSE	canonical	3	46	junction_2	49.7482551341139	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATTCATACAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	176692710	176702945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806
tx.12269	chr2	+	3826	5	NNC	ENSMUSG00000078894.10	novel	3823	5	NA	NA	-23	8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	28.0846933399672	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGGATAGACAGAAACAT	3012	False	NA	NA	False	NA	NA	NA	175968338	175982129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_175968452_175971917_175971973_175977111_175977239_175977443_175977505_175978659
tx.1227	chr1	-	3964	11	NIC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	11.1449540151586	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTGTTAAAATTAACGAAA	NA	False	NA	NA	False	NA	NA	NA	191822307	191782856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_191785456_191785925_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
tx.12270	chr2	+	3831	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	0	-8	0	8	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGGATAGACAGAAACAT	3035	False	NA	NA	False	NA	NA	NA	175968361	175982129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
tx.12271	chr2	-	4473	5	NIC	ENSMUSG00000078881.11	novel	1497	4	NA	NA	-22	2788	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	106.190865897214	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176178598	176162282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_176166377_176167533_176167595_176167799_176167927_176174950_176175006_176178462
tx.12272	chr2	+	5455	5	NIC	ENSMUSG00000078877.12	novel	2505	4	NA	NA	-4	2787	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	16.6038399173203	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176490400	176505803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487_176499549_176500702
tx.12273	chr2	+	3678	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-74	-2656	-74	2343	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	176766038	176781483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
tx.12274	chr2	-	2828	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5325	1704	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	27	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	NA	False	NA	NA	False	NA	NA	NA	176964154	176954742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_176957402_176958542_176958604_176964046
tx.12275	chr2	-	2091	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5326	839	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	48	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCATTTGCATGCTCAG	NA	False	NA	NA	False	NA	NA	NA	176964155	176955607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
tx.12276	chr2	-	4103	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-38	2802	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090151	177076114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
tx.12277	chr2	+	4690	4	FSM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-128	-2993	-15	1067	multi-exon	FALSE	canonical	3	64	junction_2	23.3666428910958	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177156510	177170989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618
tx.12278	chr2	+	5843	3	ISM	ENSMUSG00000078866.11	ENSMUST00000099002.10	794	4	-20	-1068	-20	1068	intron_retention	FALSE	canonical	3	64	junction_2	12	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGGTATCT	NA	False	NA	NA	False	NA	NA	NA	177156505	177170990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_177156642_177165078_177165206_177165410
tx.12279	chr2	+	4237	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-33	2548	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	126	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177189974	177204104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
tx.1228	chr1	-	1805	11	FSM	ENSMUSG00000037395.17	ENSMUST00000192128.6	1578	11	-115	-112	-2	108	multi-exon	FALSE	canonical	3	29	junction_1	6.37887137352682	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGGTTTTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	191822339	191785575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
tx.12280	chr2	+	4144	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-22	2803	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	118.732640836461	87	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177401058	177415068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
tx.12281	chr2	+	4067	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-10	-3313	-10	2803	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177401070	177415068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
tx.12282	chr2	-	4400	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-24	-2800	-6	2800	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	768	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177482135	177470783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
tx.12283	chr2	-	4077	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-18	-3749	-18	1311	multi-exon	FALSE	canonical	3	312	junction_1	213.5	256	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	177482147	177472272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_177476105_177476312_177476440_177482029
tx.12284	chr2	-	4664	5	FSM	ENSMUSG00000078862.11	ENSMUST00000108930.9	1807	5	-51	-2806	-51	2806	multi-exon	FALSE	canonical	3	25	junction_3	8.13557004763649	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177599141	177584523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000
tx.12285	chr2	-	1440	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-23	-45	-23	31	multi-exon	FALSE	canonical	3	51	junction_1	29	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAATGTAAGAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	177720292	177710237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_177711409_177711615_177711743_177720150
tx.12286	chr2	+	2281	13	FSM	ENSMUSG00000027525.19	ENSMUST00000108916.8	2656	13	-51	426	-51	-7	multi-exon	FALSE	canonical	0	0	junction_1	1.70579079087156	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAATAAAGGCTTTCAC	1647	False	NA	NA	False	NA	NA	NA	177760920	177977858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_177761096_177897905_177898068_177901970_177902049_177911109_177911293_177920689_177920900_177924802_177924978_177925652_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
tx.12287	chr2	+	2139	3	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	3	2466	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	26.5	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTCTTAGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	179056731	179061141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_179056894_179057552_179057714_179059325
tx.12288	chr2	+	3183	3	FSM	ENSMUSG00000039138.2	ENSMUST00000041998.2	737	3	19	-2465	19	2465	multi-exon	FALSE	canonical	3	53	junction_2	6	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCTGTCTTAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	179056747	179061140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_179056894_179057552_179057714_179058264
tx.12289	chr2	+	358	2	ISM	ENSMUSG00000000305.13	ENSMUST00000108911.2	1208	6	-189	402893	2	-335508	5prime_fragment	FALSE	canonical	3	36	junction_1	0	29	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTGGGGTGTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	179084225	179086604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_179084472_179086492
tx.1229	chr1	-	1834	12	NNC	ENSMUSG00000037375.17	novel	1819	12	NA	NA	-6	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	7.07457325757953	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGTCATGGTATCTG	NA	False	NA	NA	False	NA	NA	NA	192453537	192179016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_192179154_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
tx.12290	chr2	+	6029	14	ISM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	337821	1	3089	-1	3prime_fragment	FALSE	canonical	3	15	junction_11	4.62690868979156	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTCTCCCGACTTGCT	7091	False	NA	NA	False	NA	NA	NA	179422044	179541165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_179422274_179439250_179439422_179484761_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
tx.12291	chr2	-	4127	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	24.7328840929552	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	179618475	179553944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618376
tx.12292	chr2	-	4386	16	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.2364019023428	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	179618484	179553944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618162
tx.12293	chr2	-	4444	15	FSM	ENSMUSG00000039117.17	ENSMUST00000041618.13	4416	15	-28	0	-28	0	multi-exon	FALSE	canonical	3	23	junction_8	22.5641941390083	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	179618467	179553944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
tx.12294	chr2	-	4198	16	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	28.2446455102556	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	179618510	179553944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618376
tx.12295	chr2	-	4416	15	FSM	ENSMUSG00000039117.17	ENSMUST00000227325.2	4380	15	-36	0	-36	0	multi-exon	FALSE	canonical	3	58	junction_8	16.8935744335785	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	179618475	179553944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
tx.12296	chr2	-	4347	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-42	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	27.0541843138707	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	179618481	179553944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618162
tx.12297	chr2	+	2680	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-29	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_3	16.1176232049821	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCCTCTGTCCGTCAC	NA	False	NA	NA	False	NA	NA	NA	179666750	179677254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
tx.12299	chr2	+	2560	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	-26	0	-26	0	multi-exon	FALSE	canonical	3	38	junction_3	10.2705586508232	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCCTCTGTCCGTCAC	NA	False	NA	NA	False	NA	NA	NA	179666753	179677254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
tx.123	chr1	-	1676	2	FSM	ENSMUSG00000042215.9	ENSMUST00000187602.2	378	2	18	-1316	4	-2	multi-exon	FALSE	canonical	1	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTAGCATTGGCCATT	NA	False	NA	NA	False	NA	NA	NA	33796804	33784566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_33786098_33796659
tx.1230	chr1	-	2820	12	FSM	ENSMUSG00000037375.17	ENSMUST00000044190.12	2839	12	22	-3	12	3	multi-exon	FALSE	canonical	3	12	junction_1	5.12327374676559	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGTCTTGATACTTC	NA	False	NA	NA	False	NA	NA	NA	192453509	192195132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
tx.12300	chr2	-	3725	6	ISM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-13	0	-13	0	intron_retention	FALSE	canonical	3	3926	junction_1	621.867188393149	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	False	NA	NA	False	NA	NA	NA	179684239	179678166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145
tx.12301	chr2	-	923	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-6	-3	-6	3	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	1382	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGAGAACCTGTCGTC	NA	False	NA	NA	False	NA	NA	NA	179684232	179678163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
tx.12302	chr2	-	4205	5	ISM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	14	-4	-9	4	intron_retention	FALSE	canonical	3	3926	junction_1	688.030295481238	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGAGAACCTGTCGTCA	NA	False	NA	NA	False	NA	NA	NA	179684212	179678162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517
tx.12303	chr2	+	4324	11	FSM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	19	0	19	0	multi-exon	FALSE	canonical	3	19	junction_4	6.29603049547888	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTTCTGTTTATTGAG	NA	False	NA	NA	False	NA	NA	NA	179684320	179711994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
tx.12304	chr2	+	1702	10	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_3	39.9749921826134	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTCTGTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	179712382	179727695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
tx.12305	chr2	+	1607	9	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	53.7558136390847	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGGATGTGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	179712378	179727690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
tx.12306	chr2	+	1465	8	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	60.3080527333605	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTCTGTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	179712386	179727695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
tx.12307	chr2	+	2149	10	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	58.4987073825747	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTCTGTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	179712404	179727695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_179712878_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
tx.12308	chr2	+	1678	9	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	103	junction_2	38.3305931991666	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGATGTGTCTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	179713581	179727692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
tx.12309	chr2	+	2795	14	FSM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	11	-1	11	1	multi-exon	TRUE	canonical	3	166	junction_6	20.3809866146027	318	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTGAAGGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	179761109	179804474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
tx.1231	chr1	-	3322	4	FSM	ENSMUSG00000016262.15	ENSMUST00000155579.8	3350	4	27	1	27	0	multi-exon	FALSE	canonical	2	5	junction_2	1.69967317119759	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTTTTTTAAAATTT	NA	False	NA	NA	False	NA	NA	NA	192538037	192526796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_192529524_192532058_192532175_192533259_192533452_192537750
tx.12310	chr2	+	1424	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	110	1	0	1	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	999	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	179813387	179818078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
tx.12311	chr2	-	4558	29	ISM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	40427	0	-5789	0	3prime_fragment	TRUE	canonical	3	153	junction_28	57.8472985452181	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	NA	False	NA	NA	NA	179827225	179818165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121
tx.12312	chr2	-	7544	50	ISM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	32088	0	-14128	0	3prime_fragment	TRUE	canonical	2	81	junction_47	80.6250984327635	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	NA	False	NA	NA	NA	179835564	179818165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484
tx.12313	chr2	-	11430	79	FSM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	-42	0	-42	0	multi-exon	FALSE	canonical	2	61	junction_68	85.5106215839985	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	NA	False	NA	NA	NA	179867694	179818165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
tx.12314	chr2	+	386	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	4	4	2	-1	multi-exon	FALSE	canonical	3	3954	junction_5	1417.02976680097	660	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTGCTTTTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	179899173	179900234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
tx.12315	chr2	+	321	5	ISM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	240	6	199	-3	3prime_fragment	FALSE	canonical	3	3954	junction_4	1482.42763314099	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTCTGCTTTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	179899409	179900232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
tx.12316	chr2	-	2900	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	51.4823999052103	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	179915286	179900332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179914892
tx.12317	chr2	-	2973	10	FSM	ENSMUSG00000038990.15	ENSMUST00000108891.2	2975	10	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_5	39.9001841018062	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	179915287	179900332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
tx.12318	chr2	+	2951	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038259.13	3010	12	44	15	44	0	multi-exon	FALSE	canonical	3	51	junction_3	7.21568539381252	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	180098081	180116645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
tx.12319	chr2	+	1512	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	15	-17	1	0	multi-exon	FALSE	canonical	3	47	junction_3	10.4253297309965	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	False	NA	NA	False	NA	NA	NA	180224519	180228097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
tx.1232	chr1	-	9230	9	FSM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	41	3	-17	-3	multi-exon	FALSE	canonical	2	2	junction_5	6.65206734782504	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACGTTTCTTCACA	169	False	NA	NA	False	NA	NA	NA	192718042	192573543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
tx.12320	chr2	+	2247	7	FSM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	197	5	-20	-5	multi-exon	FALSE	canonical	3	62	junction_6	11.4370256428652	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	180231234	180237624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
tx.12321	chr2	+	2248	7	FSM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	196	5	-21	-5	multi-exon	FALSE	canonical	3	62	junction_6	11.4370256428652	22	2	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	180231233	180237624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
tx.12322	chr2	-	2252	6	FSM	ENSMUSG00000038932.14	ENSMUST00000037877.11	2225	6	-27	0	-27	0	multi-exon	FALSE	canonical	3	29	junction_3	24.9591666527551	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCCAGTGAGTCGCTTT	5342	False	NA	NA	False	NA	NA	NA	180284528	180263748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180264508_180277046_180277189_180280196_180280441_180282093_180282257_180282673_180282858_180283768
tx.12323	chr2	-	2263	6	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	22.1666416039959	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCCAGTGAGTCGCTTT	5334	False	NA	NA	False	NA	NA	NA	180284536	180263748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_180264508_180277046_180277189_180280196_180280444_180282093_180282257_180282673_180282858_180283768
tx.12324	chr2	-	8480	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCTCTCTTCACTCA	NA	False	NA	NA	False	NA	NA	NA	180351849	180299756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
tx.12325	chr2	-	7283	15	FSM	ENSMUSG00000038914.16	ENSMUST00000103057.8	4906	15	-24	-2353	-24	2353	multi-exon	FALSE	canonical	3	75	junction_9	45.219194046379	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCATTGTTTGTTTGAC	NA	False	NA	NA	False	NA	NA	NA	180351816	180307727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
tx.12326	chr2	-	4942	7	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-57	160	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	68.3091420593824	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAATGGCTCATCAAGTGA	NA	False	NA	NA	False	NA	NA	NA	180351849	180322690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180351702
tx.12327	chr2	-	4670	6	FSM	ENSMUSG00000038914.16	ENSMUST00000130986.8	4898	6	242	-14	-116	-1	multi-exon	FALSE	canonical	3	16	junction_5	68.2864554651945	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTATCCTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	180343901	180322851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
tx.12328	chr2	-	4670	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-57	0	-57	0	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTATCCTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	180351849	180322850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
tx.12329	chr2	+	1602	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	46	7	46	-4	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCACAATGGCTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	180351955	180360519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
tx.1233	chr1	-	3239	7	ISM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	47	38655	-11	175	5prime_fragment	FALSE	canonical	2	2	junction_3	7.41057802513857	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTGTGTTGTTTATTT	175	False	NA	NA	False	NA	NA	NA	192718036	192612195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_192613236_192615421_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
tx.12330	chr2	+	1565	5	NNC	ENSMUSG00000027573.12	novel	1655	5	NA	NA	103	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	77.29610274781	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAATGGCTTCTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	180352012	180360522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359613
tx.12331	chr2	+	2567	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-55	-2	intron_retention	FALSE	canonical	3	182	junction_6	18.7713514794124	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	NA	False	NA	NA	NA	180367116	180384071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
tx.12332	chr2	+	2260	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	15	0	15	0	multi-exon	TRUE	canonical	3	124	junction_2	30.6879455161143	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	NA	False	NA	NA	NA	180367070	180384073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
tx.12333	chr2	+	3178	9	ISM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	9050	0	-2105	0	3prime_fragment	FALSE	canonical	3	182	junction_3	17.4212513901843	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	NA	False	NA	NA	NA	180376105	180384073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
tx.12334	chr2	-	2518	2	ISM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	9037	0	8475	0	3prime_fragment	FALSE	canonical	3	596	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	180553705	180546169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_180547462_180552479
tx.12335	chr2	-	2618	6	NNC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	228.880230688454	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	180562749	180546169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_180547462_180552479_180553254_180553826_180554001_180560927_180561008_180562104_180562130_180562476
tx.12336	chr2	-	3191	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	602	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	180562749	180546169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
tx.12337	chr2	+	1571	7	NNC	ENSMUSG00000038840.8	novel	1178	7	NA	NA	-386	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	5.87839736284947	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCAGCTAGGCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	180570429	180575803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_180571307_180572597_180572698_180573051_180573131_180573211_180573258_180574711_180574784_180574922_180575129_180575612
tx.12338	chr2	-	956	7	FSM	ENSMUSG00000027574.16	ENSMUST00000103053.10	950	7	-3	-3	-3	3	multi-exon	FALSE	canonical	3	96	junction_2	10.8576649832682	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTCGCATCCCTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	180596495	180576561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180576823_180577735_180577821_180578943_180579005_180584822_180585021_180585533_180585615_180585869_180586008_180596363
tx.12339	chr2	+	2747	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	2	-22	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	65.799947842644	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGAGCTGTCTGGGCCCT	4047	False	NA	NA	False	NA	NA	NA	180609039	180624297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
tx.1234	chr1	-	2673	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	29	2868	1	483	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGCTTTGCCTGCGTTT	NA	False	NA	NA	False	NA	NA	NA	192812551	192789577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
tx.12340	chr2	+	2639	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	13	62	2	4	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGTGTCTGTCA	4047	False	NA	NA	False	NA	NA	NA	180609039	180624257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
tx.12341	chr2	+	3299	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	201	junction_1	24.4135379110307	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4048	False	NA	NA	False	NA	NA	NA	180609040	180624253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
tx.12342	chr2	-	3445	7	FSM	ENSMUSG00000016346.18	ENSMUST00000123336.8	1686	7	-101	-1658	-17	1658	multi-exon	FALSE	canonical	3	10	junction_1	1.82574185835055	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGTTTGGCTAGGCTT	NA	False	NA	NA	False	NA	NA	NA	180777071	180748578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
tx.12343	chr2	+	737	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	-46	-2	-6	2	multi-exon	TRUE	canonical	3	258	junction_1	248.035279748668	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3379	False	NA	NA	False	NA	NA	NA	180829082	180830299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
tx.12344	chr2	+	852	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	43	265	-6	2	multi-exon	FALSE	canonical	3	201	junction_1	270.955139275859	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3379	False	NA	NA	False	NA	NA	NA	180829082	180830299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
tx.12345	chr2	+	787	4	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	-86	2	intron_retention	FALSE	canonical	3	629	junction_1	111.05254011803	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3539	False	NA	NA	False	NA	NA	NA	180829242	180830299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_180829530_180829601_180829680_180829796_180829894_180829974
tx.12346	chr2	+	807	4	FSM	ENSMUSG00000016344.15	ENSMUST00000146089.8	750	4	-55	-2	-4	2	multi-exon	FALSE	canonical	3	258	junction_1	285.921123544395	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3381	False	NA	NA	False	NA	NA	NA	180829084	180830299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974
tx.12347	chr2	-	4673	10	NNC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	318	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.4181676949817	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTGTGTTTGTCTCTTGT	6513	False	NA	NA	False	NA	NA	NA	180929491	180893243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180928785
tx.12348	chr2	-	4107	10	FSM	ENSMUSG00000038705.14	ENSMUST00000049032.13	4121	10	12	2	-7	-2	multi-exon	FALSE	canonical	3	53	junction_5	10.3171916936948	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTGTGTTTGTCTCTTGT	6188	False	NA	NA	False	NA	NA	NA	180929816	180893243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180929676
tx.12349	chr2	+	4026	2	Genic_Genomic	ENSMUSG00000084033.4	novel	788	1	NA	NA	-4396	2680	multi-exon	FALSE	canonical	2	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGAAGACTGGGCATGG	521	False	NA	NA	False	NA	NA	NA	180929544	180937408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_+_180929904_180933741
tx.1235	chr1	+	4117	8	FSM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	3	-7	3	7	multi-exon	FALSE	canonical	3	26	junction_1	3.81190401832181	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGCTAGAGTACTGGT	NA	False	NA	NA	False	NA	NA	NA	192835421	192854338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192850140_192850824_192850944_192851589
tx.12350	chr2	-	927	5	FSM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	211	-2	211	2	multi-exon	FALSE	canonical	3	148	junction_1	19.0312243431683	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTGGCTTTTCATTC	NA	False	NA	NA	False	NA	NA	NA	180956082	180948249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955986
tx.12351	chr2	-	1747	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	41	659	-2	-607	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTAGATGGTGGTTC	6117	False	NA	NA	False	NA	NA	NA	181007156	181000284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
tx.12352	chr2	-	2222	7	ISM	ENSMUSG00000038671.16	ENSMUST00000108808.8	1133	8	10	-598	1	598	intron_retention	FALSE	canonical	3	258	junction_2	24.0537592349581	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCCTTCAATCAGTTAG	6139	False	NA	NA	False	NA	NA	NA	181007134	181000294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397
tx.12353	chr2	-	2671	5	FSM	ENSMUSG00000038671.16	ENSMUST00000152580.8	1822	5	-26	-823	1	-607	multi-exon	FALSE	canonical	3	258	junction_2	29.3715423496962	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTAGATGGTGGTTC	6120	False	NA	NA	False	NA	NA	NA	181007153	181000284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806
tx.12354	chr2	+	2077	6	FSM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	1	-6	1	6	multi-exon	FALSE	canonical	3	135	junction_3	10.1074230147946	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGTGGAGACTCAGCT	NA	False	NA	NA	False	NA	NA	NA	181007198	181022581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
tx.12355	chr2	+	3682	11	FSM	ENSMUSG00000027582.17	ENSMUST00000116366.9	3666	11	-16	0	2	0	multi-exon	FALSE	canonical	3	28	junction_6	46.2520269826091	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	181007199	181025421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
tx.12356	chr2	+	4482	10	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	53	junction_7	40.6748625620843	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	181007198	181025421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
tx.12357	chr2	+	2742	5	FSM	ENSMUSG00000090077.10	ENSMUST00000048077.12	1959	5	-783	0	374	0	multi-exon	FALSE	canonical	3	53	junction_2	13.7386316640341	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	8805	False	NA	NA	False	NA	NA	NA	181022244	181025421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
tx.12358	chr2	-	5328	5	FSM	ENSMUSG00000027583.14	ENSMUST00000029106.13	5309	5	-22	3	-22	-3	multi-exon	FALSE	canonical	3	8	junction_1	10.688779163216	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGATGCCTCCTGTGTGG	8516	False	NA	NA	False	NA	NA	NA	181101241	181029557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_181033262_181037242_181037419_181053488_181053774_181065211_181066182_181101048
tx.12359	chr2	-	2605	3	FSM	ENSMUSG00000027583.14	ENSMUST00000087409.10	2577	3	-28	0	-28	0	multi-exon	FALSE	canonical	3	29	junction_1	2	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTGCTCTCTTTATT	8510	False	NA	NA	False	NA	NA	NA	181101247	181052337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_181053774_181065211_181066182_181101048
tx.1236	chr1	+	3789	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	-2	-1530	1	-2	multi-exon	FALSE	canonical	3	16	junction_1	0	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGACAATATAAGCAGT	959	False	NA	NA	False	NA	NA	NA	192855885	192860138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_192856089_192856552
tx.12360	chr2	-	180	2	Antisense	novelGene_ENSMUSG00000088378.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATATTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	181177259	181119085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_181119101_181177094
tx.12361	chr2	+	2315	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	-16	-500	0	500	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCATTTGTTTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	181138975	181158549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
tx.12362	chr2	+	2333	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	2	615	0	500	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCATTTGTTTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	181138975	181158549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
tx.12363	chr2	+	2368	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	22	1213	0	497	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACATCCATTTGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	181138979	181158546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
tx.12364	chr2	+	2272	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	-2	1205	-2	501	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATTTGTTTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	181138977	181158550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
tx.12365	chr2	+	4339	6	FSM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	-24	-651	1	634	multi-exon	FALSE	canonical	3	55	junction_1	79.8884221899519	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTGGTTTCTTGAAG	7047	False	NA	NA	False	NA	NA	NA	181162319	181194676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065
tx.12366	chr2	+	4279	8	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-9	635	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	79.3236717377555	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7037	False	NA	NA	False	NA	NA	NA	181162309	181194677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
tx.12367	chr2	+	4295	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	34	2249	-7	635	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7039	False	NA	NA	False	NA	NA	NA	181162311	181194677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
tx.12368	chr2	+	4415	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	1	635	intron_retention	FALSE	canonical	3	55	junction_1	77.7924589318699	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7047	False	NA	NA	False	NA	NA	NA	181162319	181194677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
tx.12369	chr2	+	4367	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	-3	-636	-3	636	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGTTTCTTGAAGTG	7043	False	NA	NA	False	NA	NA	NA	181162315	181194678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
tx.1237	chr1	-	832	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	40	-1	40	1	multi-exon	FALSE	canonical	3	79	junction_1	0	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTATTTAATTCTTGG	NA	False	NA	NA	False	NA	NA	NA	192955485	192954467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_192955111_192955296
tx.12370	chr2	+	4200	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-8	635	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	78.8044344493943	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7063	False	NA	NA	False	NA	NA	NA	181162335	181194677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
tx.12371	chr2	-	1941	13	NIC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-3	1	intron_retention	FALSE	canonical	3	17	junction_6	29.3976567471325	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGGCAGAATGTAACCT	4544	False	NA	90	True	NA	NA	NA	181223804	181210940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
tx.12372	chr2	-	1763	14	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	30.2142252636738	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4566	False	NA	NA	False	NA	NA	NA	181223782	181210948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212349_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
tx.12373	chr2	-	1829	14	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.5776269109327	76	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	4560	False	NA	NA	False	NA	NA	NA	181223788	181210944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
tx.12374	chr2	-	5769	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	14	junction_15	12.4357906418888	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATTTTGTGTGGCTGAG	7480	False	NA	NA	False	NA	NA	NA	181234554	181223898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
tx.12376	chr2	-	5600	15	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-1	1	intron_retention	FALSE	canonical	1	2	junction_5	15.361129050766	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGGCTGAGTTTG	7482	False	NA	NA	False	NA	NA	NA	181234552	181223894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
tx.12377	chr2	-	2136	5	FSM	ENSMUSG00000038605.12	ENSMUST00000183836.2	2131	5	-2	-3	-2	0	multi-exon	FALSE	canonical	3	8	junction_4	19.6850196850295	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCAGTGTTGGGTCTCT	1041	False	NA	NA	False	NA	NA	NA	181240993	181237010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239387_181240724
tx.12378	chr2	-	2148	5	FSM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	16	0	2	0	multi-exon	FALSE	canonical	3	33	junction_4	9.60143218483576	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCAGTGTTGGGTCTCT	1045	False	NA	NA	False	NA	NA	NA	181240989	181237010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239403_181240724
tx.12379	chr2	+	3029	21	FSM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	26	-1	26	1	multi-exon	FALSE	canonical	3	340	junction_3	47.7921280128851	465	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGGCTTGGGCCTCAC	2520	False	NA	NA	False	NA	NA	NA	181243137	181297454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
tx.1238	chr1	+	6751	32	FSM	ENSMUSG00000026640.13	ENSMUST00000027952.12	11040	32	-2	4291	-2	-1649	multi-exon	TRUE	canonical	1	2	junction_18	4.73677577525654	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTCCAACTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	194302130	194494886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_194302706_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483350_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373
tx.12380	chr2	+	1186	10	FSM	ENSMUSG00000059540.16	ENSMUST00000103042.10	1183	10	-9	6	-9	3	multi-exon	FALSE	canonical	3	30	junction_1	6.17841723309237	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTCAGCTGGGTCCTGT	2283	False	NA	NA	False	NA	NA	NA	181322093	181329858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
tx.12381	chr2	-	1370	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108772.8	779	5	6	-597	6	1	multi-exon	FALSE	canonical	3	30	junction_4	46.2729672703189	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTTCTTTCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	181335734	181330213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181335671
tx.12382	chr2	-	1469	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	42	0	-5	0	multi-exon	FALSE	canonical	3	85	junction_5	20.8461027532726	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGTTCTTTCAAGTT	NA	False	NA	NA	False	NA	NA	NA	181335728	181330214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
tx.12383	chr2	+	3525	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	34	10	-25	5	multi-exon	FALSE	canonical	3	52	junction_6	11.3431330181157	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCAGTATTGCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	181479680	181499244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
tx.12384	chr2	+	3528	7	NNC	ENSMUSG00000027589.15	novel	3569	7	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	27.6028380183391	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATTCTCAGTATTGCTT	NA	False	NA	NA	False	NA	NA	NA	181479692	181499240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496711
tx.12385	chr2	+	2182	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	90	676	67	-676	multi-exon	FALSE	canonical	3	712	junction_2	38.5	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTATAAGCTTCTAGA	8986	False	NA	NA	False	NA	NA	NA	181506219	181511947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_181506363_181507738_181507827_181509996
tx.12386	chr3	-	1653	5	FSM	ENSMUSG00000040374.14	ENSMUST00000059021.10	1749	5	95	1	1	-1	multi-exon	FALSE	canonical	3	32	junction_2	14.3592304807744	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGCATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	5641204	5625560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5641097
tx.12387	chr3	-	1881	6	FSM	ENSMUSG00000040374.14	ENSMUST00000071280.8	1777	6	-102	-2	9	-2	multi-exon	FALSE	canonical	1	3	junction_4	21.3672646822189	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTGTGCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	5641290	5625561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5635546_5635690_5641097
tx.12388	chr3	+	3682	3	FSM	ENSMUSG00000027499.13	ENSMUST00000028999.12	3617	3	-65	0	-64	0	multi-exon	FALSE	canonical	2	5	junction_2	0.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTCTCTCAAGAGTCAT	2609	False	NA	NA	False	NA	NA	NA	7431664	7510426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_7431813_7502397_7502576_7507070
tx.12389	chr3	+	3260	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	-41	73	-41	-73	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	227	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCTTGTTATGTTTAT	NA	False	NA	NA	False	NA	NA	NA	7568501	7618823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
tx.1239	chr1	+	2366	8	FSM	ENSMUSG00000016494.10	ENSMUST00000016638.8	2454	8	88	0	2	0	multi-exon	FALSE	canonical	0	0	junction_4	1.35526185435788	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTGGCCCTATAATG	1109	False	NA	NA	False	NA	NA	NA	194621214	194643587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_194621353_194630146_194630315_194631612_194631873_194633246_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642243
tx.12390	chr3	+	1901	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	169	3	14	-3	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	689	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAACGGTTTGGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	8574588	8626663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
tx.12391	chr3	-	2620	5	FSM	ENSMUSG00000040289.9	ENSMUST00000042412.5	2423	5	-199	2	-199	-2	multi-exon	FALSE	canonical	3	9	junction_1	1.11803398874989	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGTCTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	8732515	8728420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_8730125_8731004_8731087_8731331_8731416_8731561_8731638_8731841
tx.12392	chr3	-	2473	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	1	3843	1	162	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	3037	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTTTTTATTTTTC	NA	False	NA	NA	False	NA	NA	NA	9069782	8994495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
tx.12393	chr3	+	7466	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	-56	4	-56	-4	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTGCTTCTGGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	9315605	9350389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
tx.12394	chr3	+	5640	5	ISM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	14224	4	14224	-4	3prime_fragment	FALSE	canonical	3	53	junction_4	6.37867541108654	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTGCTTCTGGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	9329885	9350389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
tx.12395	chr3	-	2601	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-37	11270	-37	2	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	393	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTATGTCTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	9675182	9503349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
tx.12396	chr3	+	696	4	FSM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	20	271	20	1	multi-exon	FALSE	canonical	3	202	junction_1	88.411914732499	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATATGTGTGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	10077627	10081396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_10077779_10080030_10080204_10080531_10080634_10081126
tx.12397	chr3	-	2147	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	44	1994	-23	4	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	291	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATACCATTTTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	10396455	10379009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
tx.12398	chr3	-	1603	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	2	5	-1	-3	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	255	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTATTGCATTTGATC	NA	False	NA	NA	False	NA	NA	NA	10416375	10405017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
tx.12399	chr3	-	4108	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	3	88	junction_7	242.301296668728	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTATTGCATTTGATC	NA	False	NA	NA	False	NA	NA	NA	10416375	10405017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10416118_10416301
tx.124	chr1	-	1815	3	FSM	ENSMUSG00000042215.9	ENSMUST00000044691.9	1860	3	43	2	-11	-2	multi-exon	FALSE	canonical	3	40	junction_1	4.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTAGCATTGGCCATT	NA	False	NA	NA	False	NA	NA	NA	33796833	33784566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_33786098_33787297_33787408_33796659
tx.1240	chr1	-	3383	9	NIC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	2	811	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	78.6018447620665	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGCCTTGATTGT	NA	False	NA	NA	False	NA	NA	NA	194813867	194778878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
tx.12400	chr3	-	2148	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	284.168084062936	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCGAGACAATTATT	NA	False	NA	NA	False	NA	NA	NA	10416375	10405027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10415562_10416118_10416301
tx.12401	chr3	-	4277	7	FSM	ENSMUSG00000039795.15	ENSMUST00000140634.2	743	7	-2685	-849	3	-13	multi-exon	FALSE	canonical	3	339	junction_1	180.261846582502	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCGAGACAATTATT	NA	False	NA	NA	False	NA	NA	NA	10416370	10405027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569
tx.12402	chr3	-	4313	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	88	junction_7	262.710595794797	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	NA	False	NA	NA	NA	10416370	10405014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10416118_10416301
tx.12403	chr3	+	1790	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	41	4357	-10	-4357	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATGATAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	10432007	10456040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
tx.12404	chr3	-	2609	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	-3	-318	-3	-11	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTTGCAATCTAGAGTG	NA	False	NA	NA	False	NA	NA	NA	10505150	10482887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
tx.12405	chr3	-	2179	7	FSM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	4	329	2	0	multi-exon	FALSE	canonical	3	23	junction_1	44.7837396086273	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGAGTTTCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	10505158	10483205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
tx.12406	chr3	+	2688	2	Genic_Genomic	ENSMUSG00000095661.2	novel	2798	1	NA	NA	-46	13	multi-exon	TRUE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGGATAAACATAAAT	NA	False	NA	NA	False	NA	NA	NA	12920849	12923706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr3_+_12921867_12922035
tx.12407	chr3	+	3334	19	FSM	ENSMUSG00000027550.15	ENSMUST00000108370.9	3359	19	23	2	-12	-2	multi-exon	FALSE	canonical	2	3	junction_18	19.4050394371038	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACAGTTTTCTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	14598870	14637716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14637463
tx.12408	chr3	+	3753	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	-10	1895	-10	0	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATTGTCTGATCTAG	NA	False	NA	NA	False	NA	NA	NA	14598872	14631466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
tx.12409	chr3	+	3341	19	FSM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	15	35	15	-35	multi-exon	FALSE	canonical	2	8	junction_6	18.5947689444845	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACATAAAGCACTTTTCG	NA	False	NA	NA	False	NA	NA	NA	14598898	14631128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
tx.1241	chr1	-	1645	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	2	4	2	2	multi-exon	FALSE	canonical	3	104	junction_9	54.0893179933677	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAGGTGTGTGGTTCAT	NA	False	NA	NA	False	NA	NA	NA	194813867	194786101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
tx.12410	chr3	+	2707	7	NIC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	-6	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	81.677040157494	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTGATCTTTGGGGG	1916	False	NA	NA	False	NA	NA	NA	14643694	14671363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14668966_14670184_14670230_14670667
tx.12411	chr3	+	1769	8	FSM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	-23	5	7	-5	multi-exon	FALSE	non_canonical	0	0	junction_3	75.6598186837988	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTGATCTTTGGGGG	1929	False	NA	NA	False	NA	NA	NA	14643707	14671363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
tx.12412	chr3	-	3427	2	FSM	ENSMUSG00000078784.9	ENSMUST00000190064.2	508	2	-24	-2895	-6	0	multi-exon	FALSE	canonical	3	4849	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	14676327	14671348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_14674718_14676269
tx.12413	chr3	-	412	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	18	5	-6	0	multi-exon	FALSE	canonical	3	4849	junction_3	245.494512271773	588	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	14676327	14671348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
tx.12414	chr3	+	2058	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	11	230	11	-230	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGTACTTGATAATGT	2190	False	NA	NA	False	NA	NA	NA	14706797	14727832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
tx.12415	chr3	+	1744	8	NIC	ENSMUSG00000027562.13	novel	1788	7	NA	NA	-40	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	37.7661980385333	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGTGCCTGATTGTC	NA	False	NA	NA	False	NA	NA	NA	14951292	14965829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_14951432_14951669_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
tx.12416	chr3	+	1764	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	23	1	23	-1	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGTGCCTGATTGTC	NA	False	NA	NA	False	NA	NA	NA	14951510	14965829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
tx.12417	chr3	+	5115	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	192.77620876723	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	16237337	16271201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_16237685_16243641_16243728_16257989_16259589_16268118
tx.12418	chr3	+	5111	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	-11	2	-11	-2	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	416	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	16237364	16271199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
tx.12419	chr3	+	5290	7	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	168.232395479851	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	16237366	16271198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257350_16257384_16257989_16259589_16268118
tx.1242	chr10	+	2150	4	FSM	ENSMUSG00000040653.7	ENSMUST00000043374.7	2617	4	467	0	-20	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTTTTGTGTATGTCA	NA	False	NA	NA	False	NA	NA	NA	3316523	3414975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_3316970_3373493_3373578_3375733_3375767_3413388
tx.12420	chr3	+	5260	6	FSM	ENSMUSG00000047213.15	ENSMUST00000191774.6	3196	6	-33	-2031	-9	0	multi-exon	FALSE	canonical	3	57	junction_2	175.937943605125	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	16237366	16271201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257989_16259589_16268118
tx.12421	chr3	+	5142	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-33	-180	-9	-2	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	16237366	16271199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
tx.12422	chr3	+	4545	2	ISM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	20751	0	20727	0	3prime_fragment	FALSE	canonical	3	484	junction_1	0	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	16258126	16271201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_16259589_16268118
tx.12423	chr3	-	2938	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	-9	744	-9	-744	multi-exon	TRUE	canonical	3	251	junction_6	16.1761140780679	273	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTTATTGTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	19217238	19186309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
tx.12424	chr3	-	2920	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-9	-744	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	91.40280204798	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTTATTGTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	19217238	19186309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_19188370_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
tx.12425	chr3	+	2805	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	137	11	-18	-11	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	911	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATACTATTATCTATTTGT	NA	False	NA	NA	False	NA	NA	NA	19242410	19274970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
tx.12426	chr3	+	3366	8	NIC	ENSMUSG00000027601.14	novel	904	4	NA	NA	18	-9	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	397.600609780668	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTATCTATTTGTAT	NA	False	NA	NA	False	NA	NA	NA	19242455	19274972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_19243057_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
tx.12427	chr3	+	2764	7	ISM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	11914	12	-11548	-12	3prime_fragment	FALSE	canonical	3	975	junction_4	80.6948986409096	231	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATACTATTATCTATTTG	NA	False	NA	NA	False	NA	NA	NA	19254187	19274969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
tx.12428	chr3	-	6411	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-85	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.5594647204927	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTCTACCTGTCAGCT	NA	False	NA	NA	False	NA	NA	NA	19365571	19277269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
tx.12429	chr3	-	3286	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-76	1341	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	61.0297312723361	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTAATCTTTGCAC	NA	False	NA	NA	False	NA	NA	NA	19365562	19280207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19310941_19311026_19314395_19314457_19365027
tx.1243	chr10	+	7328	16	FSM	ENSMUSG00000040624.19	ENSMUST00000239159.2	4478	16	-4	-2846	-4	0	multi-exon	FALSE	canonical	3	8	junction_1	7.74137512906389	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTTTCATTGAATTAA	NA	False	NA	NA	False	NA	NA	NA	3784874	3917298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_3785077_3822926_3823442_3853556_3853658_3869135_3869206_3880206_3880254_3883596_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545_3908206_3913400
tx.12430	chr3	-	3241	11	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-86	1350	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	61.2409176939732	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGCACTCTACCTTA	NA	False	NA	NA	False	NA	NA	NA	19365572	19280198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
tx.12431	chr3	-	3445	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-72	2925	-72	-1351	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCACTCTACCTTACC	NA	False	NA	NA	False	NA	NA	NA	19365558	19280196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
tx.12432	chr3	-	6279	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-81	-3	combination_of_known_splicesites	TRUE	canonical	3	44	junction_2	35.7070264168999	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCAAAGTCTACCTGT	NA	False	NA	NA	False	NA	NA	NA	19365567	19277274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_19282006_19283851_19283933_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
tx.12433	chr3	-	3933	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	2	-705	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	59.228790184984	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGTGTGTTTTAAACT	NA	False	NA	NA	False	NA	NA	NA	19365484	19279550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19314395_19314457_19365027
tx.12434	chr3	-	3397	17	FSM	ENSMUSG00000027615.15	ENSMUST00000108321.2	3385	17	-6	-6	-6	3	multi-exon	FALSE	canonical	2	2	junction_16	13.1101106021269	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATAATTTCCTATGTT	NA	False	NA	NA	False	NA	NA	NA	20089472	20050324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084574_20089212
tx.12435	chr3	-	3784	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	13	219	0	0	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTAATAATTTCCTAT	NA	False	NA	NA	False	NA	NA	NA	20089466	20050327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
tx.12436	chr3	-	2791	10	FSM	ENSMUSG00000027615.15	ENSMUST00000137408.8	3395	10	-8	612	0	-612	multi-exon	FALSE	canonical	3	37	junction_6	8.31330927555995	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTTCACTGCTTTTA	NA	False	NA	NA	False	NA	NA	NA	20089466	20067298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
tx.12437	chr3	+	3908	26	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	76	junction_25	37.5784193387641	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTGTCACTTAGTG	6948	False	NA	NA	False	NA	NA	NA	20111984	20172651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
tx.12438	chr3	+	4940	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	10	5	1	-5	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTGGTGTCACTTAG	6948	False	NA	NA	False	NA	NA	NA	20111984	20172649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
tx.12439	chr3	-	1712	7	FSM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	-11	-3	-11	0	multi-exon	FALSE	canonical	3	45	junction_2	8.93805845186128	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	False	NA	NA	False	NA	NA	NA	20209271	20176247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
tx.1244	chr10	+	6079	9	ISM	ENSMUSG00000040624.19	ENSMUST00000154727.2	5405	15	36614	0	-17691	0	intron_retention	FALSE	canonical	3	21	junction_6	4.22603537609424	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTTTCATTGAATTAA	NA	False	NA	NA	False	NA	NA	NA	3890199	3917298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545_3908206_3913400
tx.12440	chr3	+	6932	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	4	1301	4	0	multi-exon	TRUE	canonical	3	32	junction_2	67.0932187333414	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	NA	False	NA	NA	NA	22130819	22269457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
tx.12441	chr3	+	6822	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-71	-2542	4	0	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	NA	False	NA	NA	NA	22130819	22269457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
tx.12442	chr3	+	6903	17	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	65.5017890977033	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	NA	False	NA	NA	NA	22130819	22269457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_22131119_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
tx.12443	chr3	+	6902	16	FSM	ENSMUSG00000027630.14	ENSMUST00000063988.14	6667	16	-235	0	113	0	multi-exon	FALSE	canonical	1	3	junction_1	59.9696219394083	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	NA	False	NA	NA	NA	22131212	22269457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_22131592_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
tx.12444	chr3	+	4470	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	10	0	10	0	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTCTGGCCCTTCCC	5578	False	NA	NA	False	NA	NA	NA	27237123	27299107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
tx.12445	chr3	+	4208	4	ISM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	39724	0	34248	0	3prime_fragment	FALSE	canonical	3	107	junction_2	11.5854314646552	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTCTGGCCCTTCCC	NA	False	NA	NA	False	NA	NA	NA	27276837	27299107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_27277046_27280221_27280292_27293680_27293853_27295349
tx.12446	chr3	-	7218	26	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53521	3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_25	16.7382675328123	36	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTAGGGTTCTTCAGCCT	270	False	NA	NA	False	NA	NA	NA	27711026	27470307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592
tx.12447	chr3	-	6990	26	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-19	2	combination_of_known_junctions	FALSE	canonical	3	63	junction_25	12.8644626782466	58	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTAGGGTTCTTCAGCC	NA	False	NA	NA	False	NA	NA	NA	27765475	27470308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
tx.12448	chr3	+	4904	27	FSM	ENSMUSG00000027695.17	ENSMUST00000120834.8	4849	27	-57	2	-57	-2	multi-exon	TRUE	canonical	1	4	junction_2	5.02258214078643	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGGTGAAATCATTTC	8149	False	NA	NA	False	NA	NA	NA	27992786	28187386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_27992900_28006661_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
tx.12449	chr3	+	4989	17	ISM	ENSMUSG00000027695.17	ENSMUST00000067757.11	4804	26	63890	-1341	6795	1213	3prime_fragment	FALSE	canonical	1	9	junction_2	4.76969600708473	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGATTTTCTCATCAA	NA	False	NA	NA	False	NA	NA	NA	28102209	28188724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
tx.1245	chr10	+	3676	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	-8	1	-8	-1	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	569	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTCAGCTAGTAAAGCC	NA	False	NA	NA	False	NA	NA	NA	3923109	4106110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
tx.12450	chr3	+	7066	32	FSM	ENSMUSG00000027692.17	ENSMUST00000159680.9	4380	32	-325	-2361	23	-1	multi-exon	FALSE	canonical	0	0	junction_2	5.51754367825169	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGCCTTTTATATTTT	4079	False	NA	NA	False	NA	NA	NA	28317386	28724733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_28317849_28413139_28413206_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
tx.12451	chr3	+	6953	31	FSM	ENSMUSG00000027692.17	ENSMUST00000159236.9	12276	31	47	5276	-14	-3	multi-exon	FALSE	canonical	0	0	junction_2	5.59851170699261	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCATGCCTTTTATATT	4103	False	NA	NA	False	NA	NA	NA	28317410	28724731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_28317849_28413139_28413206_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
tx.12452	chr3	+	6656	31	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	4.82171016226493	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTTTTATATTTTT	NA	False	NA	NA	False	NA	NA	NA	28463581	28724734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
tx.12453	chr3	+	5009	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	14	4	14	-4	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATGTGTATGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	28835438	28852991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
tx.12454	chr3	+	5041	5	NNC	ENSMUSG00000050192.9	novel	5027	5	NA	NA	-58	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	36.9281396769455	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATGTGTATGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	28835366	28852991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_28835563_28836164_28836366_28836876_28836982_28847873_28847966_28848544
tx.12455	chr3	+	484	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	75	-7	1	0	multi-exon	FALSE	canonical	3	2038	junction_1	2670.46824857864	337	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	NA	False	NA	NA	NA	28859659	28861571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
tx.12456	chr3	+	481	4	FSM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	42	2	1	0	multi-exon	FALSE	canonical	3	3779	junction_1	1855.270390596	621	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	NA	False	NA	NA	NA	28859659	28861571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_28859693_28860651_28860742_28860885_28861008_28861335
tx.12457	chr3	+	3518	7	FSM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	-8	-116	-2	-17	multi-exon	FALSE	canonical	3	28	junction_5	66.6243615770955	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAACTGAAAAAGAAATTA	8777	False	NA	NA	False	NA	NA	NA	30656777	30672633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
tx.12458	chr3	+	3413	7	FSM	ENSMUSG00000037730.14	ENSMUST00000195396.6	4775	7	-22	1384	-22	-12	multi-exon	FALSE	canonical	3	28	junction_5	75.410911382608	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAAAAGAAATTAAGACT	8757	False	NA	NA	False	NA	NA	NA	30656757	30672638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
tx.12459	chr3	+	3618	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	561	1376	-5	-4	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTAAGACTCAACCCTT	8774	False	NA	NA	False	NA	NA	NA	30656774	30672646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
tx.1246	chr10	+	6211	4	FSM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	-17	1	-17	-1	multi-exon	FALSE	canonical	3	1052	junction_2	280.358104335628	1204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	4216362	4309469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_4216669_4263742_4263858_4303141_4307940_4308477
tx.12460	chr3	+	3480	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-18	12	-5	-12	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAAAAGAAATTAAGACT	8774	False	NA	NA	False	NA	NA	NA	30656774	30672638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
tx.12461	chr3	-	1846	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	45	0	45	0	multi-exon	TRUE	canonical	3	297	junction_6	40.0710618776194	265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTGAGTTTAGAT	NA	False	NA	NA	False	NA	NA	NA	30701973	30678415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
tx.12462	chr3	+	848	3	NNC	ENSMUSG00000027703.17	novel	2387	8	NA	NA	10774	3	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	6.5	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTGGGAAGAATGATA	NA	False	NA	NA	False	NA	NA	NA	30712808	30726583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_30713166_30714049_30714247_30726289
tx.12463	chr3	-	4606	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-21	2962	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	17.8985858379929	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGCTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	30754013	30730244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745474_30749635_30749780_30753847
tx.12464	chr3	-	4579	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-21	2962	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	19.0357394130094	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGCTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	30754013	30730244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_30733533_30735094_30735260_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
tx.12465	chr3	-	4408	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-6	2834	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	17.8815547422477	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	30753985	30730372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749762_30753847
tx.12466	chr3	-	4448	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	-28	-2834	-15	2834	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	30754007	30730372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
tx.12467	chr3	+	2538	4	ISM	ENSMUSG00000051860.14	ENSMUST00000172593.2	1511	8	5317	-1672	140	1	3prime_fragment	FALSE	canonical	2	5	junction_3	2.44948974278318	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACCTCAGGCTCTTC	672	False	NA	NA	False	NA	NA	NA	30810510	30821316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_30810898_30812474_30812594_30816287_30816399_30819395
tx.12468	chr3	+	1706	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-9	61	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	221.180356270624	53	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCATTGGACTCTAAT	NA	False	NA	NA	False	NA	NA	NA	30847475	30874242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724
tx.12469	chr3	+	2345	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	452	1170	-9	61	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	671	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCATTGGACTCTAAT	NA	False	NA	NA	False	NA	NA	NA	30847475	30874242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
tx.1247	chr10	+	4800	2	ISM	ENSMUSG00000038587.11	ENSMUST00000215696.2	5931	3	6365	0	6365	0	3prime_fragment	FALSE	canonical	3	1663	junction_1	0	877	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	4304132	4309470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_4307940_4308477
tx.12470	chr3	+	2888	9	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	236.604495942068	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTACGCAGTAGTGATG	NA	False	NA	NA	False	NA	NA	NA	30847474	30875408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709
tx.12471	chr3	+	1975	4	NIC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	76.6130247122221	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30910098	30951339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30949858
tx.12472	chr3	+	1899	5	NIC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	111.904814463007	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30910098	30951339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_30910207_30931383_30931482_30944090_30944191_30948277_30948390_30949858
tx.12473	chr3	+	2128	5	NIC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	102.806857747915	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30910098	30951339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_30910207_30931383_30931711_30944090_30944191_30948277_30948390_30949858
tx.12474	chr3	+	1790	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-46	-1398	-3	0	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30910095	30951339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
tx.12475	chr3	+	2019	4	FSM	ENSMUSG00000037661.15	ENSMUST00000046748.13	1977	4	-39	-3	0	1	multi-exon	FALSE	canonical	3	100	junction_2	83.6341238171756	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTATTTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	30910098	30951342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_30910207_30931383_30931711_30944090_30944191_30949858
tx.12476	chr3	+	2184	4	FSM	ENSMUSG00000037661.15	ENSMUST00000108258.8	2139	4	-42	-3	-16	1	multi-exon	FALSE	canonical	3	82	junction_1	77.1895214535122	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTATTTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	30910121	30951342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_30910395_30931383_30931711_30944090_30944191_30949858
tx.12477	chr3	+	4467	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	20	221	20	-221	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	2112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGACCATTTTCA	NA	False	NA	NA	False	NA	NA	NA	31049915	31106887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
tx.12478	chr3	+	6720	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	-140	-2	-140	2	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGGTTCAAGTCATCT	NA	False	NA	NA	False	NA	NA	NA	31149066	31176724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
tx.12479	chr3	+	6815	7	FSM	ENSMUSG00000027660.17	ENSMUST00000029194.12	6717	7	-100	2	-97	2	multi-exon	FALSE	canonical	0	0	junction_2	41.5668805126817	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGGTTCAAGTCATCT	NA	False	NA	NA	False	NA	NA	NA	31149109	31176724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
tx.1248	chr10	-	3102	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	11	junction_2	37	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	4337491	4317074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_4319852_4324569_4324755_4337351
tx.12480	chr3	+	6362	6	ISM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	1761	0	-14	0	3prime_fragment	FALSE	canonical	0	0	junction_1	40.2223818290265	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTGGTTCAAGTCAT	996	False	NA	NA	False	NA	NA	NA	31150967	31176722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
tx.12481	chr3	+	5516	6	FSM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	971	-3583	971	1	multi-exon	FALSE	canonical	0	0	junction_1	43.1249347825594	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTGGTTCAAGTCATC	1981	False	NA	NA	False	NA	NA	NA	31151952	31176723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
tx.12482	chr3	-	7887	6	NIC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	-25	-51	intron_retention	FALSE	canonical	3	21	junction_5	41.5855744219074	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGGCTTTTTGTGTTCA	NA	False	NA	NA	False	NA	NA	NA	32419634	32388995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419314
tx.12483	chr3	-	7814	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	-30	13	-30	-9	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTCAAAAGCGTTCG	NA	False	NA	NA	False	NA	NA	NA	32419857	32388953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
tx.12484	chr3	-	4005	5	NIC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	-5	-5431	intron_retention	FALSE	canonical	3	71	junction_4	22.792542640083	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGACTGATGGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	32419832	32394375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
tx.12485	chr3	+	5307	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-554	-1628	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	136	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCAATAATCTCCTGAC	NA	False	NA	NA	False	NA	NA	NA	32451265	32518628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
tx.12486	chr3	+	4361	16	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-548	-6829	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	14.0117411084022	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGAGTTATCTTGA	NA	False	NA	NA	False	NA	NA	NA	32451271	32510148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527
tx.12487	chr3	+	1829	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	292	90	16	0	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3198	False	NA	NA	False	NA	NA	NA	32564699	32574892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
tx.12488	chr3	+	1930	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	58	0	58	0	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3240	False	NA	NA	False	NA	NA	NA	32564741	32574892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
tx.12489	chr3	+	2572	6	ISM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	1684	0	41	0	3prime_fragment	FALSE	canonical	3	192	junction_2	18.5752523536021	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	4866	False	NA	NA	False	NA	NA	NA	32566367	32574892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
tx.1249	chr10	-	3174	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100078.10	3226	3	52	0	52	0	multi-exon	FALSE	canonical	3	64	junction_2	10.5	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	4338056	4317074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_4319852_4324569_4324755_4337844
tx.12490	chr3	+	2980	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	26	1556	26	330	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATCATTGTAGCCACGC	NA	False	NA	NA	False	NA	NA	NA	32583639	32631832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
tx.12491	chr3	+	5827	8	NIC	ENSMUSG00000027668.14	novel	2789	17	NA	NA	-2696	324	intron_retention	FALSE	canonical	3	515	junction_2	33.4737179876746	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGGCCTATCATTGTAG	NA	False	NA	NA	False	NA	NA	NA	32612998	32631826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
tx.12492	chr3	-	5941	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	50	6	-6	-6	multi-exon	TRUE	canonical	3	60	junction_8	7.61253028131584	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGCTCACTGTACCTT	NA	False	NA	NA	False	NA	NA	NA	32670684	32634486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
tx.12493	chr3	+	1819	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	189	2	-69	-2	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	1142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGCTGGATTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	32762844	32781120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
tx.12494	chr3	+	4770	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-31	0	intron_retention	FALSE	canonical	3	1234	junction_8	105.782369619054	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	32762882	32781122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
tx.12495	chr3	-	887	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	377	2100	377	78	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	203	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTGTTCTTCTAGCT	NA	False	NA	NA	False	NA	NA	NA	32790919	32781645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
tx.12496	chr3	+	672	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	72	335	-9	1	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	641	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTCTGTGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	32791210	32805380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
tx.12497	chr3	+	4725	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	43	2812	18	1965	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATGTTGTAAAATC	NA	False	NA	NA	False	NA	NA	NA	32871737	32989408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
tx.12498	chr3	+	3349	12	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	-3	102	combination_of_known_junctions	TRUE	canonical	3	14	junction_10	54.0434474740096	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGACTTAATGTCTAAGG	NA	False	NA	NA	False	NA	NA	NA	33854328	33864195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987_33862098_33862834
tx.12499	chr3	+	3709	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-64	-961	-4	961	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCATAATCACTTCAA	NA	False	NA	NA	False	NA	NA	NA	33854335	33865054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
tx.125	chr1	-	4046	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	97.3165738995961	33	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAGAGGAAATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	33853642	33800627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
tx.1250	chr10	-	1840	13	FSM	ENSMUSG00000019763.12	ENSMUST00000042251.11	3139	13	44	1255	0	1	multi-exon	FALSE	canonical	3	107	junction_3	17.5220099684178	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTTCAGCTCTTAATT	5706	False	NA	NA	False	NA	NA	NA	4382344	4353169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
tx.12500	chr3	+	3697	12	FSM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	-26	-1233	-4	966	multi-exon	FALSE	canonical	3	25	junction_10	51.4495660937939	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAATCACTTCAACATTT	NA	False	NA	NA	False	NA	NA	NA	33854335	33865059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
tx.12501	chr3	+	7407	9	ISM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-59	-969	1	969	intron_retention	FALSE	canonical	3	147	junction_6	18.6509885796973	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCACTTCAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	33854340	33865062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788
tx.12502	chr3	+	4588	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	360	4713	1	203	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGCCTGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	33854340	33864296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
tx.12503	chr3	+	5151	14	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-19	3589	-9	-3581	intron_retention	FALSE	canonical	3	1060	junction_7	81.7515358232948	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATTTTTGCATTCTTT	4840	False	NA	NA	False	NA	NA	NA	34074237	34119905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976
tx.12504	chr3	+	2519	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-13	-377	-3	351	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	584	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTTTAGTTGAAACAC	4846	False	NA	NA	False	NA	NA	NA	34074243	34123871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
tx.12505	chr3	+	2674	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-12	352	-2	-352	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	350	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTGATTTTTAACTT	4847	False	NA	NA	False	NA	NA	NA	34074244	34124119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
tx.12506	chr3	-	575	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	10	74	-1	1	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	488	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGTGTCTTGGTATAT	NA	False	NA	NA	False	NA	NA	NA	34135460	34131501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
tx.12507	chr3	+	4904	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	-36	0	-8	0	multi-exon	FALSE	canonical	2	274	junction_18	53.5097310762941	686	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	NA	False	NA	NA	NA	35808246	35910425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
tx.12508	chr3	+	6362	29	FSM	ENSMUSG00000037400.18	ENSMUST00000196700.5	6322	29	-37	-3	-9	0	multi-exon	FALSE	canonical	2	274	junction_18	53.267171706715	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	NA	False	NA	NA	NA	35808245	35910423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
tx.12509	chr3	-	4052	6	ISM	ENSMUSG00000027708.15	ENSMUST00000198389.5	3020	7	8886	-1160	0	-241	3prime_fragment	FALSE	canonical	3	154	junction_3	20.9513722700925	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTCTGGGCTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	35975337	35946494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119
tx.1251	chr10	-	2218	12	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	-6	1	intron_retention	FALSE	canonical	3	107	junction_2	18.0417330717258	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTTCAGCTCTTAATT	5700	False	NA	NA	False	NA	NA	NA	4382350	4353169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
tx.12510	chr3	-	3376	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-36	528	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTCCCATATTATTTCA	NA	False	NA	NA	False	NA	NA	NA	35987021	35947126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
tx.12511	chr3	-	3503	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	600	877	-36	524	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTTCTCCCATATTAT	NA	False	NA	NA	False	NA	NA	NA	35987021	35947130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
tx.12512	chr3	-	2433	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	22	0	-15	0	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	353	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGCTGTAGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	36054805	36013981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
tx.12513	chr3	-	4434	18	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	15	1	intron_retention	FALSE	canonical	3	210	junction_7	27.4612025785256	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTCTG	NA	False	NA	NA	False	NA	NA	NA	36054775	36013459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
tx.12514	chr3	+	3850	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	64	16	-24	-16	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATATTAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	36120191	36146986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
tx.12515	chr3	+	5005	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	54	1630	54	-1623	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACAGTTCTGATGTCTG	NA	False	NA	NA	False	NA	NA	NA	36205219	36222861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
tx.12516	chr3	-	1544	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	187	0	-48	0	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTAGGTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	36529856	36503071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
tx.12517	chr3	+	1597	12	FSM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	20	0	-1	0	multi-exon	FALSE	canonical	3	373	junction_11	43.5980892749872	407	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGAGCCGAATGAGT	NA	False	NA	NA	False	NA	NA	NA	36606774	36619876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
tx.12518	chr3	-	2793	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	171	1	-15	-1	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	1565	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATTTGGTGGGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	36626128	36619014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
tx.12519	chr3	-	2599	19	FSM	ENSMUSG00000037325.11	ENSMUST00000108156.9	2687	19	86	2	-2	-2	multi-exon	FALSE	canonical	3	20	junction_12	6.84754619472471	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTGTGTCTTTATATA	NA	False	NA	NA	False	NA	NA	NA	36667540	36627292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666160_36666227_36667398
tx.1252	chr10	-	1875	13	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	38.0292285252044	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCAGCTCTTAATTA	5697	False	NA	NA	False	NA	NA	NA	4382353	4353168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367218_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
tx.12520	chr3	+	3994	27	NIC	ENSMUSG00000037270.19	novel	3958	27	NA	NA	-12	76	combination_of_known_junctions	FALSE	canonical	3	48	junction_22	8.53958759033583	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGTTAAAATAATCTATA	NA	False	NA	NA	False	NA	NA	NA	36917240	36997621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_36917429_36918535_36918635_36924146_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36991137_36991318_36992594_36992724_36994901_36995022_36996331_36996613_36997267
tx.12521	chr3	+	3896	27	NIC	ENSMUSG00000037270.19	novel	3958	27	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	3	33	junction_22	9.76286891581853	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGCCTCTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	36917262	36997548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_36917429_36918535_36918635_36924146_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36991140_36991318_36992594_36992724_36994901_36995022_36996331_36996613_36997267
tx.12522	chr3	-	1946	5	FSM	ENSMUSG00000045031.19	ENSMUST00000102955.11	1064	5	-9	-873	-9	0	multi-exon	TRUE	canonical	3	18	junction_2	3.41869858279434	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCAGTATCTTATGCT	NA	False	NA	NA	False	NA	NA	NA	37366604	37361897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_37363331_37363493_37363632_37364085_37364215_37364441_37364589_37366505
tx.12523	chr3	+	2447	2	FSM	ENSMUSG00000051444.10	ENSMUST00000057975.8	2433	2	-14	0	-14	0	multi-exon	FALSE	canonical	3	15	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCCATTCTGTTTTTT	1237	False	NA	NA	False	NA	NA	NA	37366688	37375599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_37366735_37373198
tx.12524	chr3	+	2939	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	-24	1	-10	-1	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGTTTTATCTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	37474436	37633244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
tx.12525	chr3	+	2899	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	-10	1	-10	-1	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGTTTTATCTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	37474436	37633244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
tx.12526	chr3	+	2902	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	392	1	-10	-1	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	268	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGTTTTATCTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	37474436	37633244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
tx.12527	chr3	+	2502	3	FSM	ENSMUSG00000037211.13	ENSMUST00000108109.8	2451	3	-52	1	-52	-1	multi-exon	FALSE	canonical	3	36	junction_1	4	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGAGTGCATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	37694043	37698746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_37694214_37694668_37694958_37696703
tx.12528	chr3	+	2541	3	FSM	ENSMUSG00000037211.13	ENSMUST00000038569.8	2481	3	-61	1	-50	-1	multi-exon	FALSE	canonical	3	34	junction_1	5	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGAGTGCATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	37694045	37698746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_37694255_37694668_37694958_37696703
tx.12529	chr3	+	2251	2	NIC	ENSMUSG00000037211.13	novel	2481	3	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	37694047	37698747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_37694255_37696703
tx.1253	chr10	-	1829	13	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	36.9894879962162	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTTCAGCTCTTAAT	5697	False	NA	NA	False	NA	NA	NA	4382353	4353170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360731_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
tx.12530	chr3	-	5651	2	FSM	ENSMUSG00000044864.17	ENSMUST00000094300.4	1944	2	-1282	-2425	-1282	-3	multi-exon	FALSE	canonical	3	44	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCCTTGGTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	38510988	38503802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_38506655_38508189
tx.12531	chr3	-	5692	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	-10	12	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	7.49583217528247	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTCAGCATTGGATAA	NA	False	NA	NA	False	NA	NA	NA	38539003	38506215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38538134_38538819
tx.12532	chr3	-	8078	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	-12	-7	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	17.3781471969828	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTAAGCCTGAGTCCCTT	NA	False	NA	NA	False	NA	NA	NA	38539005	38503414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38537717_38538819
tx.12533	chr3	+	5994	17	NNC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	25.5364323075875	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCAGTATTATGTTTGC	NA	False	NA	NA	False	NA	NA	NA	40594913	40659205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631_40657076_40657471
tx.12534	chr3	+	6388	16	FSM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	-1	0	-1	0	multi-exon	FALSE	canonical	3	12	junction_15	25.5603860169078	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCAGTATTATGTTTG	NA	False	NA	NA	False	NA	NA	NA	40594914	40659204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631
tx.12535	chr3	+	1145	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	10	50157	10	1	5prime_fragment	FALSE	canonical	3	119	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCACTTGAGAACACC	NA	False	NA	NA	False	NA	NA	NA	40594925	40609047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_40595159_40608135
tx.12536	chr3	+	1606	6	FSM	ENSMUSG00000069041.9	ENSMUST00000091184.9	2128	6	19	503	19	-503	multi-exon	FALSE	canonical	3	17	junction_3	1.93907194296653	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATGAGCCTTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	40663303	40680024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_40663657_40670945_40671074_40674920_40675039_40675936_40676092_40677055_40677182_40679298
tx.12537	chr3	+	3800	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	13	5666	13	853	multi-exon	FALSE	canonical	3	15	junction_16	4.58930587290297	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTGAAAACTTGGC	NA	False	NA	NA	False	NA	NA	NA	40699874	40744872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
tx.12538	chr3	+	3466	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	11	2	2	-1	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	610	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7796	False	NA	NA	False	NA	NA	NA	40754464	40771316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
tx.12539	chr3	-	3064	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	70	17	1	-17	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATATTTCCAGTACAT	NA	False	NA	NA	False	NA	NA	NA	40801250	40772554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
tx.1254	chr10	-	2539	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	1	-768	1	768	multi-exon	FALSE	canonical	3	145	junction_2	8	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTCCAATGTCTGTT	5707	False	NA	NA	False	NA	NA	NA	4382343	4375325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_4377692_4379076_4379172_4382265
tx.12540	chr3	-	2908	12	NIC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	40	-16	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	8.60616730621008	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATATTTCCAGTACATA	NA	False	NA	NA	False	NA	NA	NA	40801197	40772553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789741_40791523_40791568_40793848_40793941_40801075
tx.12541	chr3	+	4340	13	FSM	ENSMUSG00000037818.17	ENSMUST00000108077.10	3277	13	-62	-1001	-3	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7.57554545157567	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTGTGGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	40848694	40892573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
tx.12542	chr3	+	4381	14	NIC	ENSMUSG00000037818.17	novel	3277	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	9.23909880592053	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTGTGGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	40848705	40892573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_40848879_40859320_40859429_40860306_40860392_40860601_40860654_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
tx.12543	chr3	+	4122	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	-42	-1583	-42	1572	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTCAGACTGAATTTAT	9975	False	NA	NA	False	NA	NA	NA	40904220	40933800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
tx.12544	chr3	-	1812	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	30	1165	30	1029	multi-exon	FALSE	canonical	3	569	junction_2	17	696	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGAGTCGGACTCTAAAT	NA	False	NA	NA	False	NA	NA	NA	41037451	41021925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_41023160_41024714_41024871_41037029
tx.12545	chr3	-	610	2	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	-6	-1438	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGGACTCTTAACTGTGC	NA	False	NA	NA	False	NA	NA	NA	41447633	41439896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_41440396_41447522
tx.12546	chr3	-	4369	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	-6	-2202	-4	-1453	multi-exon	FALSE	canonical	3	87	junction_1	0	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATTTAAAAGACCCTAG	NA	False	NA	NA	False	NA	NA	NA	41447631	41439911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_41444172_41447522
tx.12547	chr3	+	5474	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	1	6	1	0	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1273	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	41510166	41571293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
tx.12548	chr3	+	5354	10	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_9	244.759039984882	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	41510167	41571292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41567557
tx.12549	chr3	+	3855	2	ISM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	44948	-746	7372	0	3prime_fragment	FALSE	canonical	3	791	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	491	False	NA	NA	False	NA	NA	NA	41564236	41571293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_41564356_41567557
tx.1255	chr10	+	2301	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	127	1	-26	0	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	4382593	4405140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
tx.12550	chr3	-	3015	21	FSM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	-10	0	-10	0	multi-exon	FALSE	canonical	3	23	junction_17	7.74919350642375	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTCATGTATTTGA	NA	False	NA	NA	False	NA	NA	NA	41696959	41581154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
tx.12551	chr3	+	3415	6	FSM	ENSMUSG00000025766.15	ENSMUST00000108065.9	3452	6	41	-4	1	4	multi-exon	FALSE	canonical	3	14	junction_1	11.0199818511647	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATTTTGTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	41697089	41713369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_41697125_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
tx.12552	chr3	-	4614	2	FSM	ENSMUSG00000090919.7	ENSMUST00000166505.7	5218	2	-10	614	-10	-614	multi-exon	FALSE	canonical	2	3	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATGATGGATATGTCTG	NA	False	NA	NA	False	NA	NA	NA	46402386	46397245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_46401725_46402251
tx.12553	chr3	-	577	2	FSM	ENSMUSG00000037910.3	ENSMUST00000036023.3	593	2	16	0	16	0	multi-exon	FALSE	canonical	3	53	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTTTAGATGTGTCT	NA	False	NA	NA	False	NA	NA	NA	48563521	48560166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_48560355_48563132
tx.12554	chr3	-	3300	12	FSM	ENSMUSG00000027737.11	ENSMUST00000029297.6	9223	12	25	5898	19	-987	multi-exon	FALSE	canonical	2	3	junction_8	2.75740925238238	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTAATTTCATCTCTTA	8856	False	NA	NA	False	NA	NA	NA	50398035	50325284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_50326816_50332012_50332191_50333483_50333634_50335420_50335518_50336323_50336428_50338492_50338617_50372436_50372482_50378490_50378591_50382099_50382226_50389797_50389914_50393237_50393365_50397433
tx.12555	chr3	+	2571	3	FSM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	474	14	451	-1	multi-exon	FALSE	canonical	3	120	junction_1	3.5	192	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATCTTGTCTCTTTGGT	9620	False	NA	NA	False	NA	NA	NA	51132341	51159051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_51132709_51155225_51155496_51157117
tx.12556	chr3	-	2965	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	81	-435	20	0	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	51184915	51162650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
tx.12557	chr3	-	2932	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	17	-435	17	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	51184918	51162650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
tx.12558	chr3	-	3138	8	NIC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	-28	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	97.7940359602146	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGGTTTTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	51184893	51162652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51173233_51173467_51174173_51174288_51184625
tx.12559	chr3	-	3531	11	NIC	ENSMUSG00000037174.19	novel	5919	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	92.5656523771102	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	51248103	51162650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51207203_51207307_51215470_51215637_51230642_51230873_51233368_51233457_51247834
tx.1256	chr10	+	3858	7	ISM	ENSMUSG00000019767.13	ENSMUST00000138112.8	3350	11	-22	17876	-22	2654	5prime_fragment	FALSE	canonical	2	2	junction_5	4.14996653266291	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAAAGATTTATTT	3185	False	NA	NA	False	NA	NA	NA	4432479	4494355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_4432629_4462751_4462881_4464055_4464313_4468905_4469051_4470754_4470941_4483958_4484277_4491681
tx.12560	chr3	-	3492	11	NIC	ENSMUSG00000037174.19	novel	3353	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	93.351004279547	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	51248100	51162650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51207203_51207307_51215470_51215637_51230642_51230873_51233368_51233457_51247834
tx.12561	chr3	-	3435	10	FSM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	-26	2510	-26	0	multi-exon	FALSE	canonical	3	55	junction_9	82.9231385897823	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	51248110	51162650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
tx.12562	chr3	-	3403	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	-49	-1	-30	0	multi-exon	FALSE	canonical	3	55	junction_9	81.5267887503894	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	51248114	51162650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
tx.12563	chr3	+	185	2	Antisense	novelGene_ENSMUSG00000104241.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATAGATGTTAGATGA	NA	False	NA	NA	False	NA	NA	NA	51251814	51317242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr3_+_51251960_51317202
tx.12564	chr3	-	1223	4	FSM	ENSMUSG00000037161.15	ENSMUST00000038154.12	1232	4	9	0	9	0	multi-exon	FALSE	canonical	3	186	junction_2	9.84321537348893	132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTAGTCTTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	51303960	51295832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847
tx.12565	chr3	-	425	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	34	790	10	11	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	610	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACTGGTCAGTGCTGAT	NA	False	NA	NA	False	NA	NA	NA	51316375	51312887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
tx.12566	chr3	+	5587	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-30	533	-30	-533	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	894	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCATGACTAAAAGTAGT	NA	False	NA	-95	True	NA	NA	NA	51323406	51382873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
tx.12567	chr3	+	4829	16	ISM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	26744	528	854	-528	3prime_fragment	FALSE	canonical	3	462	junction_14	46.3831386988371	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTAAAAGTAGTGCCGA	9317	False	NA	NA	False	NA	NA	NA	51350180	51382878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
tx.12568	chr3	+	2941	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	224	327	224	-327	multi-exon	FALSE	canonical	3	63	junction_1	0	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCGTTTCTTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	51391610	51403326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_51392002_51400776
tx.12569	chr3	-	5222	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	40	2149	40	-2149	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTATGTGACACTTTTA	NA	False	NA	NA	False	NA	NA	NA	51468260	51424888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
tx.1257	chr10	-	7001	31	NIC	ENSMUSG00000096054.4	novel	6990	32	NA	NA	-38	2	intron_retention	TRUE	canonical	2	5	junction_5	2.95221197673127	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTTCCTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	5500730	5286946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_5289386_5292153_5292295_5293357_5293523_5294794_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676_5306821_5308333_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806_5406869_5491947_5492213_5500458
tx.12570	chr3	+	2360	5	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	10.8253175473055	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTTTGTTTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	51509154	51534602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr3_+_51509432_51518972_51519090_51532025_51532159_51532710_51533027_51533085
tx.12571	chr3	+	2256	4	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	11.5181016954473	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTTTGTTTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	51509141	51534602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr3_+_51509432_51532025_51532159_51532710_51533027_51533085
tx.12572	chr3	+	1022	4	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	12.5521135891752	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGGGGGAAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	51509144	51533493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr3_+_51509310_51532025_51532159_51532710_51533027_51533085
tx.12573	chr3	+	5519	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	25	3121	25	-3121	multi-exon	FALSE	canonical	3	61	junction_1	0	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTGGCTTGGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	52175781	52257521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_52176844_52252459_52253812_52254416
tx.12574	chr3	+	4318	2	ISM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	76844	3119	76844	-3119	3prime_fragment	FALSE	canonical	3	61	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTTGGTGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	52252600	52257523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_52253812_52254416
tx.12575	chr3	-	2922	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	13	247	-6	0	multi-exon	FALSE	canonical	3	106	junction_7	14.5610676585896	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	NA	False	NA	NA	NA	52924645	52889542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
tx.12576	chr3	+	2117	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGAGTCACCGAGTT	NA	False	NA	NA	False	NA	NA	NA	52948939	53169100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
tx.12577	chr3	-	450	2	Antisense	novelGene_ENSMUSG00000048332.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	53026127	53020955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr3_-_53021169_53025890
tx.12578	chr3	-	4848	6	FSM	ENSMUSG00000042997.14	ENSMUST00000130348.2	4885	6	42	-5	16	0	multi-exon	FALSE	canonical	3	21	junction_4	7.03135833249878	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGCTTTATTCATTT	NA	False	NA	NA	False	NA	NA	NA	53370702	53356003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369732_53369886_53370480
tx.12579	chr3	-	5004	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	43	0	8	0	multi-exon	FALSE	canonical	3	23	junction_4	5.77350269189626	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGCTTTATTCATTT	NA	False	NA	NA	False	NA	NA	NA	53370710	53356003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
tx.1258	chr10	-	1773	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	167	0	167	0	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	731	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	5755433	5749159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
tx.12580	chr3	+	4546	13	FSM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	-69	-5	-69	5	multi-exon	FALSE	canonical	3	36	junction_11	9.75071222469871	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAGAAGTGTTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	53371017	53389181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
tx.12581	chr3	+	2685	3	ISM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	14216	-5	-249	5	3prime_fragment	FALSE	canonical	3	36	junction_1	3.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAGAAGTGTTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	53385302	53389181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_53386588_53386980_53387132_53387932
tx.12582	chr3	-	6113	21	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-13166	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.78232998312527	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTTTTTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	53464855	53421358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_53422160_53422191_53422351_53422422_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53464729
tx.12583	chr3	-	1991	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	23	2876	23	1570	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATTCTCTTGTCAGTA	NA	False	NA	NA	False	NA	NA	NA	53771228	53763672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
tx.12584	chr3	+	2865	27	FSM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	13	-127	-3	0	multi-exon	FALSE	canonical	3	259	junction_20	89.4210256174979	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	NA	False	NA	NA	NA	54600240	54636184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
tx.12585	chr3	+	3064	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	226	junction_19	87.4338698674604	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	NA	False	NA	NA	NA	54600521	54636184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
tx.12586	chr3	-	1848	9	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1645	junction_8	201.288932569578	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	NA	False	NA	NA	NA	54642468	54636098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
tx.12587	chr3	-	950	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	348	2	1	1	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	615	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTAGTCCTTACGTTG	NA	False	NA	NA	False	NA	NA	NA	54642466	54636100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
tx.12588	chr3	-	1579	10	ISM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	392	4	34	0	3prime_fragment	FALSE	canonical	3	1829	junction_6	127.661976511856	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	NA	False	NA	NA	NA	54642422	54636102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716
tx.12589	chr3	+	5038	9	NIC	ENSMUSG00000036632.10	novel	1471	10	NA	NA	-438	-3	intron_retention	FALSE	canonical	3	432	junction_4	39.5158196169585	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAAGGTGTCCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	54642521	54657213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
tx.1259	chr10	-	4400	4	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	271	-5	271	5	intron_retention	FALSE	canonical	3	762	junction_1	16.7531091641721	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGTTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	5755329	5749154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868
tx.12590	chr3	+	1459	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	9	3	9	-3	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAAGGTGTCCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	54642968	54657213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
tx.12591	chr3	+	1946	3	ISM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	26755	10820	26755	-10820	internal_fragment	FALSE	canonical	2	9	junction_1	0.5	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGGTTACCTGTGACT	NA	False	NA	NA	False	NA	NA	NA	54689757	54697858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_54690194_54693484_54693743_54696606
tx.12592	chr3	-	2161	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	-1	2	-1	-2	multi-exon	FALSE	canonical	3	271	junction_1	17.5	203	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGTCTGCTGTACTTAT	NA	False	NA	NA	False	NA	NA	NA	54715213	54710537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_54711997_54712780_54712889_54714619
tx.12593	chr3	+	3870	10	NNC	ENSMUSG00000036580.16	novel	3770	9	NA	NA	-17	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	79.9825598273974	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCCTCAGATGTATTCA	NA	False	NA	NA	False	NA	NA	NA	55019511	55044737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_55019639_55022902_55022992_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
tx.12594	chr3	+	3602	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	-24	-11	-3	0	multi-exon	FALSE	canonical	3	36	junction_3	57.8710741604975	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTATTCACTGGAC	NA	False	NA	NA	False	NA	NA	NA	55019525	55044743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
tx.12595	chr3	+	3764	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	1	5	1	0	multi-exon	FALSE	canonical	0	0	junction_4	65.469339197826	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTCAGATGTATTCAC	NA	False	NA	NA	False	NA	NA	NA	55019529	55044738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
tx.12596	chr3	+	4038	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	-60	3	-2	-3	multi-exon	FALSE	canonical	0	0	junction_4	69.2431178890726	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGCCTCAGATGTATT	NA	False	NA	NA	False	NA	NA	NA	55019526	55044735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
tx.12597	chr3	+	3664	8	ISM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	4814	-5	803	0	3prime_fragment	FALSE	canonical	0	0	junction_3	63.0157090877881	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTATTCACTGGAC	NA	False	NA	NA	False	NA	NA	NA	55024400	55044743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
tx.12598	chr3	+	2355	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	4	5	4	-5	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	421	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAGTGTGCAAGGAAT	NA	False	NA	NA	False	NA	NA	NA	55089452	55117373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
tx.12599	chr3	+	2552	10	NIC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	-106	0	intron_retention	FALSE	canonical	3	238	junction_7	30.4010233745876	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGCAAGGAATCTGAT	NA	False	NA	NA	False	NA	NA	NA	55089342	55117378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_55089536_55096541_55096757_55097730_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
tx.126	chr1	-	3993	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-35	0	8	0	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	366	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	33853643	33800625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
tx.1260	chr10	-	2805	7	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	-24	320	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	8.85061203156784	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTACTCTCATACATAT	NA	False	NA	NA	False	NA	NA	NA	5773934	5761566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768927_5768985_5770024_5770105_5773525
tx.12600	chr3	-	4411	6	ISM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	629	0	629	0	3prime_fragment	TRUE	canonical	3	192	junction_3	17.8392824967822	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCCTTTGTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	57482620	57363069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243
tx.12601	chr3	-	4692	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	5	0	5	0	multi-exon	FALSE	canonical	3	192	junction_3	19.06494747494	298	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCCTTTGTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	57483244	57363069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
tx.12602	chr3	-	837	4	ISM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	235	2007	228	3	3prime_fragment	FALSE	canonical	3	518	junction_3	11.8977121983832	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTCTAGACAGTTCAAT	NA	False	NA	NA	False	NA	NA	NA	57558901	57553776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842
tx.12603	chr3	-	972	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	14	2006	7	4	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTAGACAGTTCAATA	NA	False	NA	NA	False	NA	NA	NA	57559122	57553775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
tx.12604	chr3	+	2614	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	14	50	1	-50	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATTTTAATTTTG	NA	False	NA	NA	False	NA	NA	NA	57643496	57742602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
tx.12605	chr3	+	2683	9	FSM	ENSMUSG00000036503.14	ENSMUST00000199041.2	1062	9	-25	-1596	10	-291	multi-exon	FALSE	canonical	3	113	junction_8	24.8281594162757	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAAGTATTGTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	57643515	57742249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384
tx.12606	chr3	+	2751	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	11	-37	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	55.1311164407179	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGAATTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	57643516	57742615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_57643622_57655311_57655456_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
tx.12607	chr3	-	1816	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	519	7	-11	3	multi-exon	FALSE	canonical	3	22	junction_1	7	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCATTGGACTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	57754981	57749322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_57750736_57752594_57752788_57754771
tx.12608	chr3	+	4731	4	FSM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	5	5063	0	0	multi-exon	FALSE	canonical	3	31	junction_2	37.7447568102732	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	NA	False	NA	NA	NA	58322140	58369141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_58325035_58335648_58335721_58366751_58366804_58367428
tx.12609	chr3	+	4815	4	NIC	ENSMUSG00000027806.10	novel	715	5	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	51.1881062574327	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGCTCTATATGT	NA	False	NA	NA	False	NA	NA	NA	58322140	58369138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_58325035_58344737_58344897_58366751_58366804_58367428
tx.1261	chr10	-	1459	7	FSM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	-43	1172	-43	153	multi-exon	FALSE	canonical	3	26	junction_4	9.49853789918334	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGACAGTTGTTTTATGC	NA	False	NA	NA	False	NA	NA	NA	5773953	5763058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
tx.12610	chr3	+	4661	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	95	junction_1	10.5	231	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	NA	False	NA	NA	NA	58322138	58369141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_58325035_58366751_58366804_58367428
tx.12611	chr3	+	6312	2	ISM	ENSMUSG00000027806.10	ENSMUST00000196049.2	715	5	37300	-1411	37300	0	3prime_fragment	FALSE	canonical	3	116	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	NA	False	NA	NA	NA	58362204	58369141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_58366804_58367428
tx.12612	chr3	-	2436	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	19	2156	19	-2156	multi-exon	FALSE	canonical	3	847	junction_1	36.5	1132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTTTGCAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	58433294	58429393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_58431290_58432503_58432580_58432830
tx.12613	chr3	+	2157	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	142	0	-79	0	multi-exon	TRUE	canonical	3	611	junction_6	73.3195163601748	795	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	58433383	58464922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
tx.12614	chr3	+	3130	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	29	-2	29	2	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTTTGTGAAAATGAT	NA	False	NA	NA	False	NA	NA	NA	58484085	58500556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
tx.12615	chr3	-	2497	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	1	13	1	-13	multi-exon	FALSE	canonical	3	158	junction_1	0	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATGCTTCATTTTCT	NA	False	NA	NA	False	NA	NA	NA	58599820	58582371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_58583865_58598816
tx.12616	chr3	+	5679	11	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	36.6727419209418	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGCCTGAGATTG	NA	False	NA	NA	False	NA	NA	NA	60408627	60537169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
tx.12617	chr3	+	5035	14	FSM	ENSMUSG00000036885.15	ENSMUST00000079300.13	5638	14	602	1	-53	-1	multi-exon	FALSE	canonical	2	8	junction_11	5.33715346421589	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGCTAGCATTATAGAAG	NA	False	NA	NA	False	NA	NA	NA	62246366	62369641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_62247995_62248764_62248805_62252566_62252713_62285008_62285066_62288251_62288413_62326969_62327123_62330921_62331052_62334009_62334085_62336301_62336392_62339908_62340064_62355513_62355724_62365793_62365862_62367030_62367136_62367624
tx.12618	chr3	-	4557	26	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	105.693140742434	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTTGTCATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	62414425	62375435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_62375729_62376789_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
tx.12619	chr3	-	5616	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	0	4	0	-4	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	601	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATAGTTGTCATGTTT	NA	False	NA	NA	False	NA	NA	NA	62414425	62375437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
tx.1262	chr10	-	2040	5	ISM	ENSMUSG00000015202.14	ENSMUST00000150282.2	2554	6	895	-2	895	2	3prime_fragment	FALSE	canonical	3	42	junction_2	7.08872343937891	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGATTTTATGAATTTG	NA	False	NA	NA	False	NA	NA	NA	7084611	7069060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521
tx.12620	chr3	+	5741	23	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2090	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	89.7851890084843	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	-58	True	NA	NA	NA	63148890	63291134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_63148988_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
tx.12621	chr3	+	2598	3	NNC	ENSMUSG00000027820.13	novel	615	6	NA	NA	-67	-78135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGGCCATATTTCCTG	NA	False	NA	-58	True	NA	NA	NA	63148890	63157112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_63148988_63150636_63150788_63154762
tx.12622	chr3	+	5993	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2088	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	124.832380670597	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTGCTTTGCAT	NA	False	NA	-58	True	NA	NA	NA	63148890	63291132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
tx.12623	chr3	+	5818	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2088	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTGCTTTGCAT	NA	False	NA	-58	True	NA	NA	NA	63148890	63291132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
tx.12624	chr3	+	5811	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	0	2089	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	388	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTGCTTTGCATT	NA	False	NA	NA	False	NA	NA	NA	63202868	63291133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
tx.12625	chr3	+	5758	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	114	-2090	114	2090	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	NA	False	NA	NA	NA	63203629	63291134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
tx.12626	chr3	-	5784	2	ISM	ENSMUSG00000036834.17	ENSMUST00000159982.9	5099	14	36752	-210	-1759	207	3prime_fragment	FALSE	canonical	3	19	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAAGTATTGTATATAC	NA	False	NA	NA	False	NA	NA	NA	63611534	63603447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_63606902_63609204
tx.12627	chr3	-	1557	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	83	0	2	0	multi-exon	FALSE	canonical	3	41	junction_2	6.68487097856047	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTCTGAGATCACTC	NA	False	NA	NA	False	NA	NA	NA	63836810	63822104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
tx.12628	chr3	-	2997	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	150	3	48	-3	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCAAAGCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	63872039	63849753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
tx.12629	chr3	+	2258	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	21	5826	21	-5826	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	1412	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTAACTGAGGCTCA	NA	False	NA	NA	False	NA	NA	NA	63883547	63924174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
tx.1263	chr10	-	3438	13	FSM	ENSMUSG00000015202.14	ENSMUST00000015346.12	3447	13	11	-2	11	2	multi-exon	FALSE	canonical	3	41	junction_10	5.32812245438193	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGATTTTATGAATTTG	NA	False	NA	NA	False	NA	NA	NA	7162226	7069060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7110643_7110808_7161631
tx.12630	chr3	-	2930	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	23	4	23	-4	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	855	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTGTTTTTCTGTAA	2739	False	NA	NA	False	NA	NA	NA	65300021	65287079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
tx.12631	chr3	+	3801	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	16	374	16	-374	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTTGTTCTATTTC	NA	False	NA	NA	False	NA	NA	NA	65435846	65462565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
tx.12632	chr3	+	2460	3	FSM	ENSMUSG00000074579.15	ENSMUST00000099075.4	2461	3	2	-1	2	1	multi-exon	FALSE	canonical	3	10	junction_2	1	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTGTAATTATTGT	NA	False	NA	NA	False	NA	NA	NA	65573650	65593601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_65573733_65576510_65576600_65591312
tx.12633	chr3	-	2230	12	FSM	ENSMUSG00000027829.16	ENSMUST00000135719.8	1981	12	-205	-44	12	0	multi-exon	FALSE	canonical	3	56	junction_8	51.1618724254952	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	NA	NA	NA	65865658	65853571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
tx.12634	chr3	-	2308	12	FSM	ENSMUSG00000027829.16	ENSMUST00000129002.8	2229	12	-79	0	8	0	multi-exon	FALSE	canonical	3	27	junction_8	57.4382888393569	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	NA	NA	NA	65865662	65853571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
tx.12635	chr3	-	3924	11	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	7	0	intron_retention	FALSE	canonical	3	56	junction_7	53.5545516272893	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	NA	NA	NA	65865663	65853571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
tx.12636	chr3	-	2155	11	FSM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	14	0	14	0	multi-exon	FALSE	canonical	3	90	junction_8	39.2388837761728	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	NA	NA	NA	65865656	65853571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
tx.12637	chr3	+	3186	10	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	104.560455665079	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGACTGCTTCCTCCC	NA	False	NA	NA	False	NA	NA	NA	66893019	67265729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_66893116_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
tx.12638	chr3	+	3210	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	14	0	1	0	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	427	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGACTGCTTCCTCC	NA	False	NA	NA	False	NA	NA	NA	66893018	67265728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
tx.12639	chr3	+	1097	7	FSM	ENSMUSG00000048416.16	ENSMUST00000077916.12	1114	7	19	-2	-9	2	multi-exon	FALSE	canonical	3	41	junction_1	4.04145188432738	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGGTTAAATTGGTCA	NA	False	NA	NA	False	NA	NA	NA	67281448	67307333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_67281596_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
tx.1264	chr10	-	5825	4	ISM	ENSMUSG00000079685.11	ENSMUST00000218087.2	5959	5	16772	0	16752	0	3prime_fragment	FALSE	canonical	3	25	junction_3	16.8193010820572	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTTCTCTTACTT	NA	False	NA	NA	False	NA	NA	NA	7406589	7390361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339
tx.12640	chr3	+	2656	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	21	1401	1	324	multi-exon	TRUE	canonical	0	0	junction_6	154.691388272057	607	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTTCACTGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	67337449	67382461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
tx.12641	chr3	-	1106	6	FSM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	5	1	5	-1	multi-exon	FALSE	canonical	3	160	junction_4	5.56417109729742	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGAGTCTAATTGCATTGT	NA	False	NA	NA	False	NA	NA	NA	67371254	67365331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
tx.12642	chr3	+	3001	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	8	2	8	-2	multi-exon	TRUE	canonical	3	661	junction_4	69.2886394407882	1152	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAGGATAAATGACT	NA	False	NA	NA	False	NA	NA	NA	67490081	67511568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
tx.12643	chr3	+	2137	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	17	2	17	-2	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACGTCCTTTTGCTCAC	NA	False	NA	NA	False	NA	NA	NA	68401557	68533794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
tx.12644	chr3	+	2207	7	ISM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	26176	20	151	-2	3prime_fragment	FALSE	canonical	3	341	junction_1	53.0830062784273	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACGTCCTTTTGCTCAC	NA	False	NA	NA	False	NA	NA	NA	68401691	68533794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
tx.12645	chr3	+	1572	7	FSM	ENSMUSG00000027777.16	ENSMUST00000170788.9	1730	7	155	3	155	-2	multi-exon	FALSE	canonical	3	114	junction_1	136.891684675634	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACGTCCTTTTGCTCAC	NA	False	NA	NA	False	NA	NA	NA	68479732	68533794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_68479997_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
tx.12646	chr3	+	4077	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	239	0	7	0	multi-exon	FALSE	canonical	3	521	junction_3	142.05353233605	873	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	68912309	68941956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
tx.12647	chr3	+	4563	23	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	738	0	461	0	3prime_fragment	FALSE	canonical	3	521	junction_2	143.517910017767	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	68912808	68941956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
tx.12648	chr3	-	3126	3	FSM	ENSMUSG00000034317.15	ENSMUST00000136512.3	1553	3	-29	-1544	11	-5	multi-exon	FALSE	canonical	3	60	junction_2	267.5	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTGGTGACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	68952077	68942625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_68945342_68951100_68951176_68951742
tx.12649	chr3	-	2926	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	8	5	8	-5	multi-exon	FALSE	canonical	3	361	junction_2	117	957	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTGGTGACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	68952080	68942625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_68945342_68951100_68951176_68951945
tx.1265	chr10	-	6439	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	50	-2674	-1	-2	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGTTCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	7423588	7390363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
tx.12650	chr3	-	5251	2	FSM	ENSMUSG00000034317.15	ENSMUST00000142560.2	384	2	-39	-4828	1	-1897	multi-exon	FALSE	canonical	3	361	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAGAAAAAAAAAAGAAATAG	NA	False	NA	NA	False	NA	NA	NA	68952087	68946066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_68951176_68951945
tx.12651	chr3	-	3737	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	-11	0	10	0	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	439	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGGTGTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	69034436	68979553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
tx.12652	chr3	+	4614	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-20	4823	-20	2880	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCTAGTTCCTGAGACC	1754	False	NA	NA	False	NA	NA	NA	69224173	69463312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
tx.12653	chr3	-	2218	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	41	-231	41	231	multi-exon	FALSE	canonical	3	41	junction_2	5	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAGAAAGGCCACCA	NA	False	NA	NA	False	NA	NA	NA	69506252	69481259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_69483294_69486658_69486725_69506134
tx.12654	chr3	+	1770	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	39	7326	-8	5	multi-exon	FALSE	canonical	3	839	junction_3	66.7311687960648	838	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGGTTTCATAA	NA	False	NA	NA	False	NA	NA	NA	69629356	69656380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
tx.12655	chr3	-	1831	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	48	48	3	-48	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	636	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTCATGTTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	75464115	75423844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
tx.12656	chr3	+	3305	9	FSM	ENSMUSG00000027834.16	ENSMUST00000029423.9	4091	9	-353	1139	-353	-1139	multi-exon	FALSE	canonical	3	8	junction_2	2.1650635094611	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATGTCCCAAATGT	NA	False	NA	NA	False	NA	NA	NA	75464500	75549663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_75464950_75520386_75520655_75521760_75521992_75523874_75524070_75526425_75526631_75531165_75531264_75545224_75545312_75547555_75547646_75547981
tx.12657	chr3	-	1814	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	0	intron_retention	FALSE	canonical	3	25	junction_2	102.5	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	75563059	75554752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_75556298_75562696_75562869_75562962
tx.12658	chr3	-	1910	2	NIC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-20	3	intron_retention	FALSE	canonical	3	230	junction_1	0	54	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATGGTCATGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	75563058	75554749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_75556298_75562696
tx.12659	chr3	-	1786	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-24	0	intron_retention	FALSE	canonical	3	71	junction_2	79.5	45	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	75563062	75554752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_75556298_75562696_75562869_75562993
tx.1266	chr10	-	6561	7	NNC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	-18854	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.0190896302642	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTTCTCTTACTT	NA	False	NA	NA	False	NA	NA	NA	7442492	7390361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253_7423388_7442171
tx.12660	chr3	-	4341	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	10	200	-2	96	multi-exon	FALSE	canonical	3	22	junction_8	6.26950290427133	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTATTTTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	75864246	75783689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
tx.12661	chr3	-	7688	29	NIC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-730	-3	combination_of_known_splicesites	FALSE	canonical	2	16	junction_23	9.02716987313119	33	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCATGAATTGTGC	NA	False	NA	NA	False	NA	NA	NA	79194554	78969825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
tx.12662	chr3	-	7747	29	NNC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-771	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	10.9180621738774	27	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCATGAATTGTGC	NA	False	NA	NA	False	NA	NA	NA	79194595	78969825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019624_79080210_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
tx.12663	chr3	-	7048	18	FSM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	-27	278	-27	-278	multi-exon	FALSE	canonical	3	55	junction_17	18.4325197807334	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTCCTAGTGCTGCAT	8065	False	NA	NA	False	NA	NA	NA	79475130	79363558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
tx.12664	chr3	-	5079	5	ISM	ENSMUSG00000061175.13	ENSMUST00000154645.2	2737	10	18850	-3342	-15467	-277	3prime_fragment	FALSE	canonical	3	112	junction_2	10.6183802907977	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCCTAGTGCTGCATG	NA	False	NA	NA	False	NA	NA	NA	79388979	79363557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865
tx.12665	chr3	-	7270	18	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-200	-275	combination_of_known_junctions	TRUE	canonical	3	39	junction_17	21.062273788996	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTAGTGCTGCATGAT	NA	False	NA	NA	False	NA	NA	NA	79439383	79363555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79438849
tx.12666	chr3	+	5034	8	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	10	-2	intron_retention	FALSE	canonical	3	2177	junction_3	244.828803160786	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGGATGTCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	79498681	79510955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
tx.12667	chr3	+	1736	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	14	2	14	-2	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	1695	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGGATGTCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	79498685	79510955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
tx.12668	chr3	-	2251	13	FSM	ENSMUSG00000027809.15	ENSMUST00000029386.14	2377	13	111	15	-13	0	multi-exon	FALSE	canonical	3	73	junction_10	10.8790701195767	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGCATTTATTTATTTA	3695	False	NA	NA	False	NA	NA	NA	79536059	79511109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
tx.12669	chr3	-	3756	3	FSM	ENSMUSG00000027809.15	ENSMUST00000149511.2	3740	3	-11	-5	10	5	multi-exon	FALSE	canonical	3	110	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTTACACTCATTTT	3718	False	NA	NA	False	NA	NA	NA	79536036	79526868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_79530275_79530847_79530986_79535824
tx.1267	chr10	+	2729	3	FSM	ENSMUSG00000019796.13	ENSMUST00000135907.8	976	3	-292	-1461	18	0	multi-exon	FALSE	canonical	3	11	junction_1	106	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7283	False	NA	NA	False	NA	NA	NA	7465598	7501247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_7466378_7484307_7484404_7499393
tx.12670	chr3	+	1962	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	8	0	8	0	multi-exon	FALSE	canonical	3	150	junction_1	0	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTTTCTTTAGACTCA	4377	False	NA	NA	False	NA	NA	NA	79536393	79540127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_79536664_79538435
tx.12671	chr3	-	2761	12	NIC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	3.82466981235684	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTTTCTTCTTTAGA	NA	False	NA	NA	False	NA	NA	NA	79750234	79719872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
tx.12672	chr3	-	3012	10	FSM	ENSMUSG00000028020.17	ENSMUST00000029654.15	3029	10	16	1	16	-1	multi-exon	FALSE	canonical	3	21	junction_1	6.91214711777591	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTCTTTACTGCTAT	NA	False	NA	NA	False	NA	NA	NA	80820951	80750906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
tx.12673	chr3	+	3021	7	FSM	ENSMUSG00000028019.10	ENSMUST00000129285.8	2818	7	-205	2	-205	-2	multi-exon	FALSE	canonical	3	14	junction_2	32.8705372974374	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTAAGTGTTCGTCTAA	NA	False	NA	NA	False	NA	NA	NA	80944273	81121339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_80944862_81038324_81038384_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
tx.12674	chr3	+	2955	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	560	6	-196	0	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	False	NA	NA	False	NA	NA	NA	80944282	81121341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
tx.12675	chr3	+	6137	14	FSM	ENSMUSG00000033900.14	ENSMUST00000091014.10	6218	14	80	1	-18	-1	multi-exon	TRUE	canonical	0	0	junction_6	2.99111109157286	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTAACTGACGTTTT	NA	False	NA	NA	False	NA	NA	NA	82265458	82302574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_82265563_82266281_82266432_82267196_82267282_82270597_82270922_82278485_82278710_82281414_82281509_82284229_82284475_82286243_82286315_82287384_82287554_82289200_82289291_82290514_82290677_82290822_82290969_82291151_82291285_82298434
tx.12676	chr3	+	1840	9	FSM	ENSMUSG00000033860.14	ENSMUST00000194175.2	1741	9	-3	-96	-3	96	multi-exon	FALSE	canonical	3	22	junction_4	1.69096865730859	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATATCTTTTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	82915164	82922108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444
tx.12677	chr3	+	1560	10	FSM	ENSMUSG00000033860.14	ENSMUST00000048486.13	1695	10	135	0	-2	0	multi-exon	FALSE	canonical	3	22	junction_4	1.8324913891634	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGACATTCCGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	82915165	82922356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444_82921615_82922141
tx.12678	chr3	+	1774	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	14	63	4	3	multi-exon	TRUE	canonical	3	670	junction_6	49.0312790627637	744	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTTTATTTCTGAAA	NA	False	NA	NA	False	NA	NA	NA	82962842	82979599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
tx.12679	chr3	+	2043	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	-42	2	-42	-2	multi-exon	FALSE	canonical	3	19	junction_1	5.5	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCTTCTGTCATGT	NA	False	NA	NA	False	NA	NA	NA	83673585	83681621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_83674351_83676632_83676714_83680424
tx.1268	chr10	+	3364	7	FSM	ENSMUSG00000019796.13	ENSMUST00000019931.12	3386	7	22	0	22	0	multi-exon	FALSE	canonical	3	223	junction_6	23.7065391822594	542	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7287	False	NA	NA	False	NA	NA	NA	7465602	7501247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
tx.12680	chr3	-	2968	2	ISM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	429	0	429	0	3prime_fragment	FALSE	canonical	3	36	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	83748645	83743578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_83746097_83748195
tx.12681	chr3	-	2899	3	FSM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	114	1	114	-1	multi-exon	FALSE	canonical	3	25	junction_2	5.5	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGTTTCTCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	83748960	83743579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_83746097_83748195_83748444_83748826
tx.12682	chr3	-	4989	35	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	16.8193125114079	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTATTTTTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	83947468	83805510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_83805921_83806483_83806624_83807633_83807723_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
tx.12683	chr3	-	4807	34	NIC	ENSMUSG00000033767.15	novel	4774	34	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	18.2607880991439	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	83947470	83805511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_83805921_83806483_83806624_83807633_83807723_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
tx.12684	chr3	-	4808	34	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	14.3287519105165	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	83947468	83805511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
tx.12685	chr3	-	5085	36	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	-1	13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_32	22.5658220885172	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGCTTTTTAAAATCT	NA	False	NA	NA	False	NA	NA	NA	83947469	83805502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83876698_83876783_83938915_83938960_83946621_83946693_83947283
tx.12686	chr3	-	4991	35	FSM	ENSMUSG00000033767.15	ENSMUST00000191758.6	5555	35	14	550	0	4	multi-exon	FALSE	canonical	3	49	junction_6	12.592082974362	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	83947468	83805511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
tx.12687	chr3	-	874	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	1	0	1	0	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	84063092	83995239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
tx.12688	chr3	-	759	7	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_2	82.0137183646736	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	84063092	83995239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_83995482_84000861_84000907_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
tx.12689	chr3	-	6301	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	21488	-2897	198	0	3prime_fragment	FALSE	canonical	3	56	junction_3	11.8801889247978	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGAGTGTTTATTCAAC	NA	False	NA	NA	False	NA	NA	NA	84098657	84067746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819
tx.1269	chr10	+	3223	7	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.9327551684409	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7278	False	NA	NA	False	NA	NA	NA	7465593	7501247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7480087_7480148_7484307_7484404_7499393
tx.12690	chr3	-	7430	12	FSM	ENSMUSG00000027993.17	ENSMUST00000107691.8	7428	12	-1	-1	-1	0	multi-exon	TRUE	canonical	3	5	junction_11	27.3305447747744	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGTGTTTATTCAACA	NA	False	NA	NA	False	NA	NA	NA	84167120	84067745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84166631
tx.12691	chr3	-	7054	12	FSM	ENSMUSG00000027993.17	ENSMUST00000054990.11	3816	12	42	-3280	42	-1	multi-exon	FALSE	canonical	2	9	junction_11	26.7448921515557	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTGAGTGTTTATTCA	NA	False	NA	NA	False	NA	NA	NA	84178056	84067748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84177940
tx.12692	chr3	-	3022	3	FSM	ENSMUSG00000027993.17	ENSMUST00000140568.2	664	3	-783	-1575	242	1575	multi-exon	FALSE	canonical	3	70	junction_2	13	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCATCTGTACCTTTGG	NA	False	NA	NA	False	NA	NA	NA	84098613	84082982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_84085107_84085381_84085486_84097819
tx.12693	chr3	-	5939	12	FSM	ENSMUSG00000041842.16	ENSMUST00000107689.7	5918	12	-19	-2	-19	2	multi-exon	FALSE	canonical	2	2	junction_2	2.63165724111457	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGCCTTTGCACATGT	NA	False	NA	NA	False	NA	NA	NA	84387755	84349502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_84353838_84356056_84356222_84358676_84358795_84360823_84360895_84362093_84362202_84362294_84362366_84364301_84364403_84364492_84364579_84371578_84371682_84372728_84372791_84381446_84382085_84387674
tx.12694	chr3	-	3040	9	FSM	ENSMUSG00000074513.10	ENSMUST00000143514.3	1343	9	-54	-1643	-54	0	multi-exon	FALSE	canonical	3	20	junction_5	63.3733974156349	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	84489986	84403399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240_84455343_84489720
tx.12695	chr3	-	2944	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-145	0	-54	0	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	212	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	84489986	84403399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
tx.12696	chr3	+	5137	14	FSM	ENSMUSG00000028086.16	ENSMUST00000107679.8	4473	14	-665	1	-665	0	multi-exon	FALSE	canonical	3	30	junction_3	22.7195403737157	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGCCTGTTTCTTCCAC	NA	False	NA	NA	False	NA	NA	NA	84721909	84886504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
tx.12697	chr3	+	5076	13	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-668	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.8649580125115	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGCCTGTTTCTTCCAC	NA	False	NA	NA	False	NA	NA	NA	84721906	84886504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_84723077_84771270_84771319_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
tx.12698	chr3	+	3755	11	ISM	ENSMUSG00000028086.16	ENSMUST00000107678.8	4073	13	39460	0	-21875	0	3prime_fragment	FALSE	canonical	3	58	junction_10	14.0499110317468	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	NA	False	NA	NA	NA	84810911	84886505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
tx.12699	chr3	+	3645	11	FSM	ENSMUSG00000028086.16	ENSMUST00000029727.8	2221	11	127	-1551	127	-1	multi-exon	FALSE	canonical	2	9	junction_1	26.0516794084374	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCGCCTGTTTCTTCCA	756	False	NA	NA	False	NA	NA	NA	84859579	84886503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_84859947_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
tx.127	chr1	-	3347	13	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-33	8089	10	7909	5prime_fragment	FALSE	canonical	3	234	junction_5	31.6503247306494	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGTTTCCTAAAC	NA	False	NA	NA	False	NA	NA	NA	33853641	33808714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
tx.1270	chr10	-	2478	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	14	-1	14	1	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGTCTGGATCCTTG	NA	False	NA	NA	False	NA	NA	NA	7539053	7505143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
tx.12700	chr3	+	2011	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	0	1458	0	6	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	177	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCGTGGGTGCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	85481425	85561471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
tx.12701	chr3	+	5179	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-11	2049	-11	-633	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	227	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTACACTGCATTG	NA	False	NA	NA	False	NA	NA	NA	85878404	86035784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
tx.12702	chr3	+	186	2	Antisense	novelGene_ENSMUSG00000102218.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATTTGGAAGGCTGTG	7339	False	NA	NA	False	NA	NA	NA	86024577	86086039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr3_+_86024724_86085999
tx.12703	chr3	-	901	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	71	5	71	-5	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	2307	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	NA	NA	NA	86049938	86045251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
tx.12704	chr3	+	4994	24	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-477	-1071	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	5.92198811964571	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTAGTGCTGTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	86131509	86258230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553
tx.12705	chr3	+	6513	34	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-471	24404	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	5.67888813339272	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCATTGCTAATTATTTT	NA	False	NA	NA	False	NA	NA	NA	86131515	86283705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211
tx.12706	chr3	-	3487	16	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	61.1551760324141	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	NA	False	NA	NA	NA	86827711	86693459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_86694720_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
tx.12707	chr3	-	4037	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	-545	-6	-28	0	multi-exon	FALSE	canonical	3	155	junction_11	36.9688156874593	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	NA	False	NA	NA	NA	86828187	86693459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
tx.12708	chr3	-	4048	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	-36	0	-36	0	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	NA	False	NA	NA	NA	86828195	86693459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
tx.12709	chr3	+	1536	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	-5	-4	-5	4	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGTTTTATTAAATC	NA	False	NA	NA	False	NA	NA	NA	86893852	86897091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
tx.1271	chr10	-	2431	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	319	7	14	1	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGTCTGGATCCTTG	NA	False	NA	NA	False	NA	NA	NA	7539053	7505143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
tx.12710	chr3	-	1863	5	ISM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	369	0	-118	0	3prime_fragment	FALSE	canonical	3	57	junction_4	12.9687123493429	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCCAGAGGTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	86906379	86903140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939
tx.12711	chr3	-	1861	6	FSM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	85	0	-15	0	multi-exon	FALSE	canonical	3	57	junction_4	13.2	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCCAGAGGTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	86906663	86903140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939_86906213_86906498
tx.12712	chr3	-	7220	16	FSM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	13	3	13	-3	multi-exon	FALSE	canonical	3	15	junction_15	12.9144191593049	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCATGTTCTGTGTTATT	NA	False	NA	NA	False	NA	NA	NA	87081994	86985902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
tx.12713	chr3	-	7213	16	FSM	ENSMUSG00000041734.16	ENSMUST00000107618.9	7278	16	72	-7	25	-1	multi-exon	FALSE	canonical	3	30	junction_15	10.3850319637875	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTCTGTGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	87081982	86985900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
tx.12714	chr3	-	7281	16	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	18.0276331101882	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGTTCTGTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	87082006	86985901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995841_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
tx.12715	chr3	+	5135	5	FSM	ENSMUSG00000003382.19	ENSMUST00000170036.8	5127	5	4	-12	4	-2	multi-exon	FALSE	canonical	3	20	junction_1	10.2072278312968	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAATGTTTGCTGAGT	NA	False	NA	NA	False	NA	NA	NA	87432888	87447461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530_87436647_87442817
tx.12716	chr3	+	5133	5	FSM	ENSMUSG00000003382.19	ENSMUST00000119109.8	5309	5	171	5	0	-5	multi-exon	FALSE	canonical	3	12	junction_1	13.4605906259718	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTTAAATGTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	87432884	87447458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87432967_87434567_87434624_87435176_87435415_87436530_87436647_87442817
tx.12717	chr3	+	6812	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	18.8502175978037	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTGTGGTTGTATG	6134	False	NA	NA	False	NA	NA	NA	87524847	87645339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
tx.12718	chr3	+	6564	38	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-12	5	combination_of_known_splicesites	FALSE	canonical	3	35	junction_35	18.9389469278987	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTTGTATGATTCTTA	6140	False	NA	NA	False	NA	NA	NA	87524853	87645346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
tx.12719	chr3	+	6781	40	FSM	ENSMUSG00000041977.19	ENSMUST00000039476.15	6776	40	-4	-1	-4	0	multi-exon	FALSE	canonical	3	40	junction_7	19.3349315805408	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6164	False	NA	NA	False	NA	NA	NA	87524877	87645341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
tx.1272	chr10	-	1158	7	FSM	ENSMUSG00000019795.18	ENSMUST00000163085.8	1132	7	-29	3	13	-3	multi-exon	FALSE	canonical	3	667	junction_3	37.7491721763537	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCATCATTCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	7539054	7513496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
tx.12720	chr3	+	6711	40	NIC	ENSMUSG00000041977.19	novel	5603	39	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_20	19.5967231491748	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6147	False	NA	NA	False	NA	NA	NA	87524860	87645341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
tx.12721	chr3	+	6705	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_21	21.8596322932791	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6144	False	NA	NA	False	NA	NA	NA	87524857	87645341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
tx.12722	chr3	+	6699	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_20	20.0595759618992	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATTGTGGTTGTATGA	6155	False	NA	NA	False	NA	NA	NA	87524868	87645340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
tx.12723	chr3	+	6835	41	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_21	21.0653744329409	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTGTGGTTGTATG	6138	False	NA	NA	False	NA	NA	NA	87524851	87645339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
tx.12724	chr3	+	6540	38	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_35	19.4597597574427	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6156	False	NA	NA	False	NA	NA	NA	87524869	87645341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
tx.12725	chr3	+	6661	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	17.5002967921014	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6167	False	NA	NA	False	NA	NA	NA	87524880	87645341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
tx.12726	chr3	+	6649	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	3	35	junction_36	20.6390460440072	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGGTTGTATGATTCT	6170	False	NA	NA	False	NA	NA	NA	87524883	87645344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
tx.12727	chr3	+	6798	41	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_21	20.6488347128839	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATTGTGGTTGTATGA	6179	False	NA	NA	False	NA	NA	NA	87524892	87645340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
tx.12728	chr3	+	4347	2	ISM	ENSMUSG00000041977.19	ENSMUST00000136072.8	2408	11	34	12513	1	-2218	intron_retention	FALSE	canonical	3	72	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCCTAGCAGCAGAGAC	6186	False	NA	NA	False	NA	NA	NA	87524899	87593939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_87526100_87590792
tx.12729	chr3	+	6627	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_36	20.1765064553401	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTGTGGTTGTATG	6190	False	NA	NA	False	NA	NA	NA	87524903	87645339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
tx.1273	chr10	+	1279	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	8	-1	-3	1	multi-exon	FALSE	canonical	3	1090	junction_2	84.4680835751418	651	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTTGGCTTGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	7543274	7554646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
tx.12730	chr3	-	1672	9	NIC	ENSMUSG00000028072.7	novel	2588	17	NA	NA	11187	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	2.29128784747792	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCTCTTGGCCATTC	NA	False	NA	NA	False	NA	NA	NA	87691282	87685550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_87685907_87686942_87687102_87687377_87687619_87688737_87688911_87689047_87689179_87689457_87689605_87690031_87690135_87690380_87690437_87690976
tx.12731	chr3	-	2062	7	FSM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	27	10	27	-10	multi-exon	FALSE	canonical	3	312	junction_5	35.6401770789964	576	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCCTACAAGGTGTCT	2326	False	NA	NA	False	NA	NA	NA	87792888	87766219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
tx.12732	chr3	+	2238	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	6	1	6	-1	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	4338	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	87813633	87823438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
tx.12733	chr3	+	3296	5	FSM	ENSMUSG00000019710.14	ENSMUST00000121048.2	1234	5	-2070	8	3	2	multi-exon	FALSE	canonical	3	982	junction_2	28.5744641244591	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	87826845	87830971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
tx.12734	chr3	+	1087	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	38	214	8	-214	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGCCTCTCCCAA	NA	False	NA	NA	False	NA	NA	NA	87826850	87830755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
tx.12735	chr3	-	3203	7	FSM	ENSMUSG00000004896.17	ENSMUST00000159091.9	3197	7	-17	11	0	-11	multi-exon	FALSE	canonical	3	63	junction_5	23.5849528301415	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAATTAACAGAC	9443	False	NA	NA	False	NA	NA	NA	87837451	87829918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
tx.12736	chr3	-	3173	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-16	0	1	0	multi-exon	FALSE	canonical	3	33	junction_5	31.4046174948844	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGACCTCTGAGTTCC	9444	False	NA	NA	False	NA	NA	NA	87837450	87829907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
tx.12737	chr3	-	1768	8	FSM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	-29	753	-29	0	multi-exon	FALSE	canonical	3	36	junction_2	29.6922995583236	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9414	False	NA	NA	False	NA	NA	NA	87837480	87830964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
tx.12738	chr3	+	2909	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	-15	-1	-15	1	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	590	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	87837605	87847994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
tx.12739	chr3	+	3619	3	NIC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-6	1	intron_retention	FALSE	canonical	3	350	junction_1	11	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	87837614	87847994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87839583_87845880_87846082_87846544
tx.1274	chr10	+	4843	4	NNC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-22	-10338	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	59.5669557911282	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATAGCATTTTCAGTTA	NA	False	NA	NA	False	NA	NA	NA	7556955	7579012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_7557215_7567098_7567579_7573265_7573414_7575056
tx.12740	chr3	+	6139	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	-15	2	0	-2	multi-exon	FALSE	canonical	3	22	junction_3	1.4142135623731	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTGGCTGCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	87878384	87887756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
tx.12741	chr3	+	1629	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	1	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCTTTGTTTTGTTTT	1720	False	NA	NA	False	NA	NA	NA	87950415	87963297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
tx.12742	chr3	+	1764	9	FSM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	0	4	0	-1	multi-exon	FALSE	canonical	3	12	junction_2	81.6783898898601	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTCTTTGTTTTGTTT	1719	False	NA	NA	False	NA	NA	NA	87950414	87963296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87950487_87950773_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
tx.12743	chr3	+	6195	7	ISM	ENSMUSG00000028069.17	ENSMUST00000193398.2	2210	8	3454	-71	3454	54	3prime_fragment	FALSE	canonical	3	164	junction_4	17.9760643325754	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTCACAGAAATCCAGG	797	False	NA	NA	False	NA	NA	NA	87953888	87963354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
tx.12744	chr3	-	935	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	-27	0	-27	0	multi-exon	TRUE	canonical	3	839	junction_3	34.2963554915096	351	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	NA	False	NA	NA	NA	87965829	87963826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
tx.12745	chr3	+	5719	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	37	0	-12	0	multi-exon	FALSE	canonical	3	183	junction_11	23.9826757536325	355	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	NA	False	NA	NA	NA	87989314	88028355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
tx.12746	chr3	+	3607	11	NNC	ENSMUSG00000001419.18	novel	3488	10	NA	NA	-385	1	intron_retention	FALSE	canonical	3	8	junction_1	44.9182590936025	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGAGATTCTTCTGCTG	6153	False	NA	NA	False	NA	NA	NA	88049293	88077238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_88049366_88049676_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
tx.12747	chr3	+	5096	10	NIC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	42.4185494015688	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTTTGGGTTTTGATT	6536	False	NA	NA	False	NA	NA	NA	88049676	88079393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
tx.12748	chr3	+	5380	11	FSM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	-10	31	-10	-31	multi-exon	FALSE	canonical	3	49	junction_10	33.5177564881661	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAACA	6528	False	NA	NA	False	NA	NA	NA	88049668	88079362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
tx.12749	chr3	+	5688	10	FSM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-46	-2154	-2	-2	multi-exon	FALSE	canonical	3	119	junction_9	15.3260852434302	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCAGTTTGGGTTTTGA	6536	False	NA	NA	False	NA	NA	NA	88049676	88079391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
tx.1275	chr10	+	7220	8	FSM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-11	0	-11	0	multi-exon	FALSE	canonical	3	31	junction_4	35.692564823412	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACTGGAAAGCTGAAT	NA	False	NA	NA	False	NA	NA	NA	7556966	7592224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
tx.12750	chr3	-	1073	4	Fusion	ENSMUSG00000010538.15_ENSMUSG00000103766.6	novel	600	2	NA	NA	-16	-1694	multi-exon	FALSE	canonical	2	5	junction_1	81.9878039710785	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAGAAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	88204161	88191760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr3_-_88192623_88194404_88194525_88202697_88202758_88204130
tx.12751	chr3	+	1965	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	12	0	2	0	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	2960	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3816	False	NA	NA	False	NA	NA	NA	88204434	88229074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
tx.12752	chr3	+	1553	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	25	2641	-7	91	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	659	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTATTTGTGAGTCTT	4020	False	NA	NA	False	NA	NA	NA	88232354	88235979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
tx.12753	chr3	-	4799	3	ISM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	-1684	-10	-40	10	intron_retention	FALSE	canonical	3	19	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACTGGAAATCTTGTA	NA	False	NA	NA	False	NA	NA	NA	88243495	88235951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_88237240_88239746_88239961_88240198
tx.12754	chr3	-	1999	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	18	389	18	2	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGCTCGTTCATTCT	NA	False	NA	NA	False	NA	NA	NA	88241793	88236350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
tx.12755	chr3	+	4439	22	FSM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	9	0	9	0	multi-exon	FALSE	canonical	3	253	junction_5	44.0686436309756	373	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	88243575	88269645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
tx.12756	chr3	-	1042	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	-31	-4	-31	4	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGGAGGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	88317669	88301445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
tx.12757	chr3	-	3508	4	FSM	ENSMUSG00000050144.14	ENSMUST00000195657.6	3504	4	0	-4	0	3	multi-exon	FALSE	canonical	3	7	junction_3	25.4689353265241	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4093	False	NA	NA	False	NA	NA	NA	88332419	88317801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332080
tx.12758	chr3	-	3439	4	FSM	ENSMUSG00000050144.14	ENSMUST00000193433.6	3429	4	-7	-3	-3	3	multi-exon	FALSE	canonical	0	0	junction_3	28.7672653471886	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4090	False	NA	NA	False	NA	NA	NA	88332422	88317801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332152
tx.12759	chr3	-	1975	5	FSM	ENSMUSG00000028064.18	ENSMUST00000156108.8	2108	5	136	-3	136	0	multi-exon	TRUE	canonical	3	30	junction_4	4.71036092035419	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATGGCGTGCTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	88348310	88343265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004
tx.1276	chr10	+	5718	7	NIC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-20	0	intron_retention	FALSE	canonical	2	3	junction_3	44.2621609152659	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACTGGAAAGCTGAAT	NA	False	NA	NA	False	NA	NA	NA	7556957	7592224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_7557215_7567098_7567579_7573265_7573414_7581223_7581807_7586228_7586412_7586612_7586720_7588264
tx.12760	chr3	-	3245	15	FSM	ENSMUSG00000028064.18	ENSMUST00000029700.12	3205	15	-40	0	-40	0	multi-exon	FALSE	canonical	0	0	junction_13	15.169787374238	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATGGCGTGCTGTGCTG	9656	False	NA	NA	False	NA	NA	NA	88363086	88343265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358758_88358994_88359094_88359326_88359390_88360277_88360439_88361985_88362154_88362854
tx.12761	chr3	-	3126	12	FSM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	30	0	2	0	multi-exon	FALSE	canonical	3	31	junction_1	44.0904404848575	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTGTGGTGTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	88410612	88388454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
tx.12762	chr3	-	2025	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	-4	0	-4	0	multi-exon	FALSE	canonical	3	100	junction_5	22.6377811589932	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	88410618	88390511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
tx.12763	chr3	+	6200	2	FSM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	-426	4	-426	-4	multi-exon	FALSE	canonical	3	19	junction_1	0	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCTTGTCTTTCACTG	NA	False	NA	NA	False	NA	NA	NA	88439275	88448699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88440156_88443379
tx.12764	chr3	-	576	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	92	0	-39	0	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	414	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1069	False	NA	NA	False	NA	NA	NA	88460239	88457125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
tx.12765	chr3	+	3382	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	441.31268959775	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6081	False	NA	NA	False	NA	NA	NA	88461040	88477031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466895_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
tx.12766	chr3	+	3343	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	-13	0	-13	0	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	2827	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6092	False	NA	NA	False	NA	NA	NA	88461051	88477032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
tx.12767	chr3	+	1037	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	21	1	-12	-1	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	1389	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	3578	False	NA	NA	False	NA	NA	NA	88486935	88495725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
tx.12768	chr3	+	1163	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	25	1	25	-1	multi-exon	FALSE	canonical	3	4285	junction_2	286.022180083993	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	3645	False	NA	NA	False	NA	NA	NA	88487002	88495725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
tx.12769	chr3	+	4281	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-31	0	intron_retention	FALSE	canonical	3	13	junction_1	80.4191759242328	39	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8587	False	NA	NA	False	NA	NA	NA	88522642	88555359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.1277	chr10	+	1767	11	FSM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	7	0	-1	0	multi-exon	TRUE	canonical	3	353	junction_4	21.6323831327018	362	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	NA	False	NA	NA	NA	7601770	7638913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
tx.12770	chr3	+	4306	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	26	1	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	8644	False	NA	NA	False	NA	NA	NA	88522699	88555358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.12771	chr3	+	4431	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	59	2	59	0	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	9453	False	NA	NA	False	NA	NA	NA	88523508	88555357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.12772	chr3	+	4286	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	12	2	-7	0	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	NA	False	NA	NA	NA	88528424	88555357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.12773	chr3	+	4255	22	FSM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	135	0	-9	0	multi-exon	FALSE	canonical	3	33	junction_1	68.5955314781911	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	NA	False	NA	NA	NA	88528733	88555357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.12774	chr3	+	2148	15	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	101.138140527636	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTTTAATGTGCATT	14	False	NA	NA	False	NA	NA	NA	88593115	88620228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936_88619041_88619864
tx.12775	chr3	+	2970	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	11	0	0	0	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	428	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATGTGCATTGTT	-10	True	NA	NA	False	NA	NA	NA	88593120	88620231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
tx.12776	chr3	+	3661	13	FSM	ENSMUSG00000028060.15	ENSMUST00000199684.5	3636	13	-25	0	-1	0	multi-exon	FALSE	canonical	3	104	junction_11	83.5129730441125	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	7	True	NA	NA	False	NA	NA	NA	88593108	88620161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067
tx.12777	chr3	+	2497	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	27	-1320	-11	-2	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCAGATTTTTTTTTTA	2244	False	NA	NA	False	NA	NA	NA	88624171	88638354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
tx.12778	chr3	+	5324	6	FSM	ENSMUSG00000028057.15	ENSMUST00000172333.8	993	6	-23	-4308	0	2807	multi-exon	FALSE	canonical	2	5	junction_2	24.0881713710277	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCCTGTTAATTTG	2255	False	NA	NA	False	NA	NA	NA	88624182	88641163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88624265_88624632_88624778_88624879_88624966_88633301_88633376_88633586_88633779_88636418
tx.12779	chr3	-	4528	4	FSM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	32	7	32	-7	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGCACAGTGCTACAG	NA	False	NA	NA	False	NA	NA	NA	88679874	88652014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88655318_88656085_88656210_88669032_88669857_88679597
tx.1278	chr10	-	1534	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	0	-9	0	0	multi-exon	TRUE	canonical	3	252	junction_3	35.482102415679	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	7489	False	NA	NA	False	NA	NA	NA	7656655	7643710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
tx.12780	chr3	+	4555	6	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	41248	749	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	81.3324043662795	20	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATACCTACTTTTTTTTT	6852	False	NA	NA	False	NA	NA	NA	88723770	88733643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
tx.12781	chr3	+	2736	4	ISM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	45230	-743	45230	743	3prime_fragment	FALSE	canonical	3	272	junction_3	35.9845645921816	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATACCTACTTT	NA	False	NA	NA	False	NA	NA	NA	88727752	88733637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_88729107_88730848_88731105_88731656_88731842_88732696
tx.12782	chr3	+	4629	12	ISM	ENSMUSG00000054199.19	ENSMUST00000081695.15	7587	33	59665	0	4461	0	3prime_fragment	FALSE	canonical	3	105	junction_5	75.4022820094419	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	88802202	88817406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
tx.12783	chr3	+	4646	3	NIC	ENSMUSG00000054199.19	novel	7537	32	NA	NA	14491	-1	combination_of_known_junctions	FALSE	canonical	3	153	junction_1	2	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	88812232	88817405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_88815915_88815993_88816097_88816544
tx.12784	chr3	-	1773	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	75	27	7	2	multi-exon	FALSE	canonical	3	676	junction_13	37.3331396162909	812	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTGTAGGGACCTGT	NA	False	NA	NA	False	NA	NA	NA	88821231	88816948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
tx.12785	chr3	-	1683	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	245	2832	102	0	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	605	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	NA	False	NA	NA	NA	88857476	88830941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
tx.12786	chr3	-	1567	13	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	242.200444994545	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	NA	False	NA	NA	NA	88857608	88830941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857422
tx.12787	chr3	+	10516	26	ISM	ENSMUSG00000028053.14	ENSMUST00000090933.5	11268	27	15658	-2	15658	0	3prime_fragment	FALSE	canonical	1	5	junction_9	4.02909419100621	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGAGTCTTTGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	88888776	88986682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_88893098_88909079_88909182_88914448_88915185_88930337_88930518_88933718_88933814_88940565_88940640_88942523_88942570_88942679_88942789_88950425_88950633_88950803_88950951_88959295_88959405_88960049_88960215_88960383_88960479_88961669_88961825_88965794_88965948_88970957_88971013_88971092_88971226_88973478_88973728_88974461_88974549_88976293_88976385_88977534_88977674_88977780_88977954_88979752_88979920_88982031_88982073_88983282_88983585_88984297
tx.12788	chr3	-	3314	10	FSM	ENSMUSG00000041263.15	ENSMUST00000052539.13	3316	10	8	-6	8	6	multi-exon	TRUE	canonical	0	0	junction_9	13.9292746170798	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTCCCTGTGGGTTTC	NA	False	NA	NA	False	NA	NA	NA	89000610	88991281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88998444_88999869_89000573
tx.12789	chr3	-	1885	9	FSM	ENSMUSG00000041263.15	ENSMUST00000166687.6	1922	9	41	-4	-29	4	multi-exon	FALSE	canonical	2	2	junction_8	11.2354072022335	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGTGTCCCTGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	88997311	88991283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997277
tx.1279	chr10	+	2880	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	20	571	3	-571	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	362	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTTACTTTTTTCTTT	1142	False	NA	NA	False	NA	NA	NA	7668674	7698328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
tx.12790	chr3	-	2206	9	ISM	ENSMUSG00000041263.15	ENSMUST00000090929.12	3706	11	2440	-4	-805	4	3prime_fragment	FALSE	canonical	2	6	junction_8	9.96791728496981	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGTGTCCCTGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	88998157	88991283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997802
tx.12791	chr3	-	1383	11	FSM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	-1	0	-1	0	multi-exon	FALSE	canonical	3	68	junction_10	899.425283166979	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	89009196	89000894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227_89008444_89009168
tx.12792	chr3	-	1190	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	47	0	-21	0	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	1100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	89009219	89000894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
tx.12793	chr3	+	1475	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	14	0	-3	0	multi-exon	TRUE	canonical	3	743	junction_2	141.598022585063	424	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	89084793	89090072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
tx.12794	chr3	+	3121	12	FSM	ENSMUSG00000032657.16	ENSMUST00000041913.13	3083	12	-40	2	20	0	multi-exon	FALSE	canonical	3	16	junction_5	4.5924839782964	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1683	False	NA	NA	False	NA	NA	NA	89090469	89096596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
tx.12795	chr3	+	3104	12	NIC	ENSMUSG00000032657.16	novel	3083	12	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	7.00649049745371	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1697	False	NA	NA	False	NA	NA	NA	89090483	89096596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092743_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
tx.12796	chr3	+	1965	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	-17	-10	-5	10	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTGACTAAAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	89110229	89115998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
tx.12797	chr3	+	1789	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	0	-10	0	8	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATCTGTGACTAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	89110234	89115996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
tx.12798	chr3	-	1095	8	FSM	ENSMUSG00000064068.16	ENSMUST00000239452.2	1522	8	424	3	1	2	multi-exon	FALSE	canonical	3	739	junction_1	39.053077434984	235	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAAAGAATCCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	89121218	89116390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
tx.12799	chr3	+	2724	7	FSM	ENSMUSG00000042784.10	ENSMUST00000041142.4	2242	7	-486	4	-486	-4	multi-exon	FALSE	canonical	2	4	junction_5	1.60727512683216	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGCCAGCTGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	89135877	89140684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89136485_89137217_89138522_89138619_89138673_89138807_89138942_89139069_89139192_89139272_89139423_89140330
tx.128	chr1	-	6324	4	FSM	ENSMUSG00000042197.14	ENSMUST00000044455.8	11876	4	1	5551	1	-5551	multi-exon	FALSE	canonical	3	15	junction_1	149.247743329301	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCCCATTTTTGTACT	NA	False	NA	NA	False	NA	NA	NA	33853650	33836767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_33842695_33844419_33844501_33852807_33852892_33853418
tx.1280	chr10	-	4529	8	NIC	ENSMUSG00000015755.17	novel	4380	7	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	19.8185647866863	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGCTTGTCTTTG	1284	False	NA	NA	False	NA	NA	NA	7831998	7781412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7796379_7800448_7800637_7808831_7808973_7831564
tx.12800	chr3	+	528	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	461	183	-7	1	multi-exon	FALSE	canonical	3	1428	junction_1	178.055293378209	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7584	False	NA	NA	False	NA	NA	NA	89153733	89157030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
tx.12801	chr3	+	553	5	NIC	ENSMUSG00000042747.13	novel	582	5	NA	NA	50	5	combination_of_known_splicesites	FALSE	canonical	3	225	junction_1	697.396945791993	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAACTGTGACAGT	7641	False	NA	NA	False	NA	NA	NA	89153790	89157034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_89153901_89154084_89154240_89154371_89154436_89156380_89156448_89156877
tx.12802	chr3	+	717	4	NIC	ENSMUSG00000042747.13	novel	582	5	NA	NA	66	1	intron_retention	FALSE	canonical	3	1794	junction_2	31.5418593124896	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7657	False	NA	NA	False	NA	NA	NA	89153806	89157030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_89154240_89154371_89154436_89156380_89156448_89156877
tx.12803	chr3	+	387	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	19	-2	19	0	multi-exon	FALSE	canonical	3	539	junction_1	0	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTAGTTTTGAGTAT	6796	False	NA	NA	False	NA	NA	NA	89173877	89174386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89173914_89174035
tx.12804	chr3	-	992	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	30	0	-14	0	multi-exon	FALSE	canonical	3	127	junction_5	11.5481600266016	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	89177847	89175552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
tx.12805	chr3	-	1350	4	FSM	ENSMUSG00000027953.14	ENSMUST00000144777.8	1332	4	-16	-2	-15	0	multi-exon	FALSE	canonical	3	133	junction_3	10.1434160364686	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	89177848	89175552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133
tx.12806	chr3	-	1495	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	-17	2	-17	1	multi-exon	FALSE	canonical	3	14	junction_2	2.77263412660235	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCCCACCA	1649	False	NA	NA	False	NA	NA	NA	89186969	89179041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
tx.12807	chr3	-	2237	4	FSM	ENSMUSG00000028039.12	ENSMUST00000200436.2	742	4	-35	-1460	-35	-5	multi-exon	FALSE	canonical	3	11	junction_1	91.0103779186137	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAATGTCTCTTA	9232	False	NA	NA	False	NA	NA	NA	89230229	89221210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89222875_89223376_89223443_89223769_89224060_89230012
tx.12808	chr3	-	1744	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	38	581	38	-581	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	223	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTGTGTGTGGTTTCA	9227	False	NA	NA	False	NA	NA	NA	89230234	89221786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
tx.12809	chr3	-	1593	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	8	-2	8	2	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTCTTTGTGTGGCCCT	1620	False	NA	NA	False	NA	NA	NA	89245327	89240694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
tx.1281	chr10	-	3373	5	ISM	ENSMUSG00000015755.17	ENSMUST00000146444.8	4380	7	36004	1	4034	-1	3prime_fragment	FALSE	canonical	3	37	junction_3	7.15454401062709	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGATTTTGTGGCTTGT	NA	False	NA	NA	False	NA	NA	NA	7795990	7781417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877
tx.12810	chr3	-	3043	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	39.5830542254913	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTCCTGGAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	89257311	89246948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
tx.12811	chr3	-	2983	23	FSM	ENSMUSG00000028041.18	ENSMUST00000029676.12	2975	23	-8	0	-8	0	multi-exon	TRUE	canonical	3	47	junction_3	32.1478056009843	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	89257311	89246946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
tx.12812	chr3	-	2967	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_2	33.4334172412835	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTCCTGGAAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	89257302	89246947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
tx.12813	chr3	-	2820	21	NNC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	30.6652898241644	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCTCCTGGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	89257304	89246949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_89247261_89247361_89247481_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
tx.12814	chr3	-	2885	22	FSM	ENSMUSG00000028041.18	ENSMUST00000107448.9	2893	22	4	4	-3	0	multi-exon	FALSE	canonical	3	22	junction_3	33.3036602620203	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	NA	False	NA	NA	NA	89257292	89246950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
tx.12815	chr3	-	2823	21	FSM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	-20	-4	1	0	multi-exon	FALSE	canonical	3	16	junction_2	31.553882486946	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	NA	False	NA	NA	NA	89257302	89246950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
tx.12816	chr3	-	3714	3	FSM	ENSMUSG00000028042.16	ENSMUST00000029677.9	3851	3	137	0	117	0	multi-exon	FALSE	canonical	3	27	junction_2	6.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCCACTTTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	89300532	89284950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89287302_89287650_89288823_89300341
tx.12817	chr3	-	3316	2	ISM	ENSMUSG00000028042.16	ENSMUST00000107433.8	3650	3	5879	2	5879	-2	3prime_fragment	FALSE	canonical	3	40	junction_1	0	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	89288617	89284952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_89287302_89287650
tx.12818	chr3	-	3687	4	NIC	ENSMUSG00000028042.16	novel	544	3	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	13.5728487143349	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	89300985	89284952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300920
tx.12819	chr3	-	3805	4	NIC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	19	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	12.2836838484589	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	89300966	89284952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300783
tx.1282	chr10	-	4312	7	FSM	ENSMUSG00000015755.17	ENSMUST00000146444.8	4380	7	68	0	68	0	multi-exon	FALSE	canonical	3	30	junction_6	9.12262145560267	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATTTTGTGGCTTGTC	1356	False	NA	NA	False	NA	NA	NA	7831926	7781416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7796379_7800448_7800637_7831564
tx.12820	chr3	-	2929	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	2	-693	2	-5	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGGGGAATGAGGGCAT	3740	False	NA	NA	False	NA	NA	NA	89319174	89309280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
tx.12821	chr3	-	1223	6	ISM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	2955	416	2867	-416	3prime_fragment	FALSE	canonical	3	278	junction_4	25.6780061531265	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGTGCCTGTTGCTC	6693	False	NA	NA	False	NA	NA	NA	89316221	89310389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728
tx.12822	chr3	-	1784	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	-5	1113	1	-415	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3739	False	NA	NA	False	NA	NA	NA	89319175	89310388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
tx.12823	chr3	-	1766	8	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	-14	-415	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	105.155666921542	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3723	False	NA	NA	False	NA	NA	NA	89319191	89310388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319124
tx.12824	chr3	-	761	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	88	0	-76	0	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	621	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	False	NA	NA	False	NA	NA	NA	89325602	89322778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89323271_89323580_89323709_89325461
tx.12825	chr3	+	3140	13	FSM	ENSMUSG00000042626.14	ENSMUST00000191485.7	3154	13	2	12	2	0	multi-exon	TRUE	canonical	3	256	junction_1	89.6222008705928	513	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	NA	False	NA	NA	NA	89325859	89337322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
tx.12826	chr3	+	2972	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	NA	False	NA	NA	NA	89325859	89337322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
tx.12827	chr3	+	3533	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	0	-916	0	0	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	NA	False	NA	NA	NA	89328934	89337322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
tx.12828	chr3	+	3038	3	FSM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	163	-3	0	3	multi-exon	FALSE	canonical	3	239	junction_1	12.5	403	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	False	NA	NA	False	NA	NA	NA	89337730	89342438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89338037_89338433_89338484_89339756
tx.12829	chr3	+	4490	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	32.9256551253289	26	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTCCTCTAGCCTGGTT	4373	False	NA	NA	False	NA	NA	NA	89344017	89358248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_89344088_89346823_89346909_89350407_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
tx.1283	chr10	-	4298	8	FSM	ENSMUSG00000047712.9	ENSMUST00000061601.9	4228	8	-15	-55	-15	2	multi-exon	FALSE	canonical	1	9	junction_7	3.52252228741084	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTCTTTTTTAACGT	NA	False	NA	NA	False	NA	NA	NA	8394604	8080517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
tx.12830	chr3	+	4464	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.4145135932695	112	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTCTAGCCTGGTTCT	4380	False	NA	NA	False	NA	NA	NA	89344024	89358250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
tx.12831	chr3	+	4602	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.3137611759929	15	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTCTAGCCTGGTTCT	4416	False	NA	NA	False	NA	NA	NA	89344060	89358250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_89344262_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
tx.12832	chr3	+	3109	2	ISM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	10721	10	10671	-10	3prime_fragment	FALSE	canonical	3	93	junction_1	0	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCCTCTAGCCTGGTTC	NA	False	NA	NA	False	NA	NA	NA	89354733	89358249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_89355573_89355979
tx.12833	chr3	+	3576	4	NIC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	31	0	intron_retention	FALSE	canonical	3	568	junction_1	30.8688984074406	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAGCTGGAGACTGAT	171	False	NA	NA	False	NA	NA	NA	89366455	89376316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_89369253_89371602_89371756_89374853_89374984_89375820
tx.12834	chr3	+	1160	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	30	4	30	0	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAGCTGGAGACTGAT	170	False	NA	NA	False	NA	NA	NA	89366454	89376316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
tx.12835	chr3	+	968	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	31	26519	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	230.312152306386	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGTGGCTGTGTTGTC	171	False	NA	NA	False	NA	NA	NA	89366455	89402839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402534
tx.12836	chr3	+	5798	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	31	-2	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTGTTACAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	89622359	89660751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
tx.12837	chr3	+	5877	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	31	1	31	-1	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGTTACAAAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	89622359	89660752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
tx.12838	chr3	+	5450	14	ISM	ENSMUSG00000027951.17	ENSMUST00000107405.6	5871	15	4424	0	-2414	0	3prime_fragment	FALSE	canonical	3	79	junction_6	19.5605568585198	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTTACAAAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	89642478	89660753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
tx.12839	chr3	+	3081	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-34	30	-34	-30	multi-exon	FALSE	canonical	3	944	junction_1	76.7428968844819	1189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGCTCTAATAAACTTA	NA	False	NA	NA	False	NA	NA	NA	89680888	89691277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
tx.1284	chr10	-	1238	2	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	8422374	8419966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_-_8421034_8422203
tx.12840	chr3	+	5155	12	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-47	-7	intron_retention	TRUE	canonical	3	945	junction_11	73.1353324973923	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACCATGGGTTCATG	NA	False	NA	NA	False	NA	NA	NA	89680875	89691300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
tx.12841	chr3	+	5884	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-146	-5	-146	5	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCATTTGCTTTGTTCA	2733	False	NA	NA	False	NA	NA	NA	89738530	89766146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
tx.12842	chr3	-	5528	27	FSM	ENSMUSG00000060671.13	ENSMUST00000069805.14	5559	27	28	3	28	-3	multi-exon	TRUE	canonical	3	88	junction_26	26.7970677544519	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	3840	False	NA	NA	False	NA	NA	NA	89867908	89846790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
tx.12843	chr3	-	5462	28	FSM	ENSMUSG00000060671.13	ENSMUST00000168276.8	4265	28	168	-1365	-61	-3	multi-exon	FALSE	canonical	3	87	junction_27	29.2541017489138	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	1101	False	NA	NA	False	NA	NA	NA	89870647	89846790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
tx.12844	chr3	-	1123	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	7	9	-4	1	multi-exon	FALSE	canonical	3	1573	junction_5	145.593040126695	620	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7197	False	NA	NA	False	NA	NA	NA	89905997	89902761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
tx.12845	chr3	-	3465	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	239.227732847313	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3536	False	NA	NA	False	NA	NA	NA	89959793	89907446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
tx.12846	chr3	-	4065	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	254.875579890443	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3536	False	NA	NA	False	NA	NA	NA	89959793	89907599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
tx.12847	chr3	-	4002	28	FSM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	-27	0	13	0	multi-exon	FALSE	canonical	3	275	junction_1	196.719480946381	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3533	False	NA	NA	False	NA	NA	NA	89959796	89907599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
tx.12848	chr3	-	4014	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	225.006501963668	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCTCTACCTTCAGCCT	3532	False	NA	NA	False	NA	NA	NA	89959797	89907603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
tx.12849	chr3	-	3454	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	3	289	junction_17	212.482304204374	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTTCTTTCCGTGCA	3532	False	NA	NA	False	NA	NA	NA	89959797	89913523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
tx.1285	chr10	-	7174	28	FSM	ENSMUSG00000019790.18	ENSMUST00000038213.14	8825	28	-557	2208	-161	2203	multi-exon	FALSE	canonical	2	7	junction_7	6.89744590012349	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAATTTTTCTGCACTTT	5845	False	NA	NA	False	NA	NA	NA	9776984	9633498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
tx.12850	chr3	-	3439	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	177.654063843189	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTTCTTTCCGTGCA	3532	False	NA	NA	False	NA	NA	NA	89959797	89913523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
tx.12851	chr3	+	2908	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	-46	-1451	-18	0	multi-exon	FALSE	canonical	3	45	junction_6	165.248718267008	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCATTTCTTTAGAGTG	NA	False	NA	NA	False	NA	NA	NA	89960102	89969752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
tx.12852	chr3	+	1613	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	3	894	3	2	multi-exon	FALSE	canonical	3	422	junction_3	33.2549077413979	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTTCTTTAGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	89960123	89969754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
tx.12853	chr3	+	2007	10	NNC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-83	-4	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	189.742580654897	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGATTTAGGCCACAGG	NA	False	NA	NA	False	NA	NA	NA	89960127	89973372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969426_89970515_89970557_89971731_89971862_89972816
tx.12854	chr3	+	2132	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	95	3	-19	2	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	2551	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGACCGGCTTGACTTTG	NA	False	NA	NA	False	NA	NA	NA	89986941	90008205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
tx.12855	chr3	+	1291	4	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	6	0	intron_retention	FALSE	canonical	3	314	junction_3	19.2527054375915	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	NA	False	NA	NA	NA	90138909	90143145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_90139348_90139501_90139819_90141229_90141310_90142689
tx.12856	chr3	+	1089	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	12	0	-3	0	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	NA	False	NA	NA	NA	90138915	90143145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
tx.12857	chr3	+	2333	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	31	0	31	0	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	193	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGGTATCTGATTCT	NA	False	NA	NA	False	NA	NA	NA	90155509	90160919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
tx.12858	chr3	+	3753	14	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-19	0	intron_retention	TRUE	canonical	3	17	junction_11	29.6114882551754	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	NA	NA	NA	90161583	90171432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_90161866_90164423_90164526_90164601_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
tx.12859	chr3	+	2283	10	FSM	ENSMUSG00000027936.19	ENSMUST00000136970.8	2214	10	-64	-5	-19	0	multi-exon	FALSE	canonical	3	9	junction_1	29.0814097846327	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	NA	NA	NA	90161583	90171432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_90161866_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
tx.1286	chr10	-	7056	26	FSM	ENSMUSG00000019790.18	ENSMUST00000141722.8	4702	26	-156	-2198	-156	2198	multi-exon	FALSE	canonical	2	2	junction_7	7.03408842708137	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTTGAATTTTTCTGC	5850	False	NA	NA	False	NA	NA	NA	9776979	9633503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
tx.12860	chr3	+	5645	28	FSM	ENSMUSG00000042404.17	ENSMUST00000129564.8	5647	28	-3	5	-3	-5	multi-exon	TRUE	canonical	3	27	junction_1	11.4060845793856	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCCTCCTGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	90172488	90187971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
tx.12861	chr3	+	7944	26	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	40	-4	intron_retention	FALSE	canonical	3	31	junction_4	10.7259684877404	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCTGTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	90172531	90187972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
tx.12862	chr3	+	3968	20	ISM	ENSMUSG00000042404.17	ENSMUST00000098914.10	5423	28	4027	4	1525	-4	3prime_fragment	FALSE	canonical	3	35	junction_5	10.1143051652137	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCTGTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	90177847	90187972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
tx.12863	chr3	+	6108	11	FSM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	6	1324	0	-1324	multi-exon	FALSE	canonical	3	14	junction_1	3.87814388593306	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTCAAAGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	90200490	90269390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_90200732_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
tx.12864	chr3	-	2247	10	FSM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	12	0	12	0	multi-exon	FALSE	canonical	3	73	junction_6	21.4101625806157	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATCTTCGAGAGT	NA	False	NA	NA	False	NA	NA	NA	90297222	90292545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
tx.12865	chr3	-	4338	31	FSM	ENSMUSG00000027933.12	ENSMUST00000071488.8	4038	31	-305	5	5	3	multi-exon	FALSE	canonical	3	31	junction_1	39.1651914615801	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGAGTTGACATCTC	NA	False	NA	NA	False	NA	NA	NA	90340915	90298699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90299219_90299299_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
tx.12866	chr3	-	4419	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	-79	-3	5	3	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	407	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGAGTTGACATCTC	NA	False	NA	NA	False	NA	NA	NA	90340915	90298699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
tx.12867	chr3	-	4554	31	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	5	-3	intron_retention	FALSE	canonical	0	0	junction_29	56.8621041546027	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAGTTGACATCTCTG	NA	False	NA	NA	False	NA	NA	NA	90340915	90298697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90339592_90339726_90340110
tx.12868	chr3	-	757	2	FSM	ENSMUSG00000027931.13	ENSMUST00000152510.2	949	2	311	-119	311	0	multi-exon	FALSE	canonical	3	173	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	90358777	90357897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90358490_90358612
tx.12869	chr3	-	969	3	ISM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	10764	0	2374	0	intron_retention	FALSE	canonical	3	97	junction_2	38	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	90362409	90357897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_90358490_90358612_90358705_90362124
tx.1287	chr10	-	4899	27	NIC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-141	-4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	6.49806525598242	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCAGTGTTTTATCA	5865	False	NA	NA	False	NA	NA	NA	9776964	9635705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
tx.12870	chr3	-	4095	22	FSM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	-29	0	-29	0	multi-exon	TRUE	canonical	3	14	junction_16	35.8067374802507	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	90373202	90357897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365701_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90370441_90370556_90371117_90371318_90372101
tx.12871	chr3	+	2986	3	NNC	ENSMUSG00000087411.2	novel	663	4	NA	NA	-498	708	intron_retention	FALSE	canonical	2	4	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACAGGATGGTGTGATA	392	False	NA	NA	False	NA	NA	NA	90358391	90365110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_90358727_90362110_90363884_90364232
tx.12872	chr3	+	2016	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	4	7	4	-7	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	1090	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	NA	False	NA	NA	NA	90383457	90395679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
tx.12873	chr3	-	1805	3	FSM	ENSMUSG00000001018.16	ENSMUST00000107351.2	958	3	-220	-627	12	0	multi-exon	FALSE	canonical	3	694	junction_2	10	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	90398319	90395679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90396901_90397460_90397580_90397854
tx.12874	chr3	-	2099	2	FSM	ENSMUSG00000001018.16	ENSMUST00000107352.2	1843	2	-593	337	3	7	multi-exon	FALSE	canonical	3	714	junction_1	0	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATTATGGTTTCA	NA	False	NA	NA	False	NA	NA	NA	90398328	90395669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90396901_90397460
tx.12875	chr3	-	1582	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	17	329	8	7	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	500	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATTATGGTTTCA	NA	False	NA	NA	False	NA	NA	NA	90398323	90395669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
tx.12876	chr3	-	3144	4	FSM	ENSMUSG00000001017.16	ENSMUST00000107343.8	3118	4	-26	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	621.962664117032	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90416783	90406262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90407415_90410402_90410590_90413414_90414934_90416497
tx.12877	chr3	-	1996	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	677	junction_3	303.893007487833	497	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90416783	90406262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
tx.12878	chr3	-	1999	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	22	-9	0	0	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	724	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90416783	90406262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
tx.12879	chr3	-	3279	5	NIC	ENSMUSG00000001017.16	novel	3257	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	677	junction_3	338.147157314682	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90416783	90406262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90414934_90416497
tx.1288	chr10	+	9244	30	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	-54	-1	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_1	19.5164493564165	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGTTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	11025116	11093338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_11025248_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
tx.12880	chr3	-	3283	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	-26	0	-1	0	multi-exon	FALSE	canonical	3	892	junction_3	258.017804618208	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90416784	90406262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
tx.12881	chr3	-	1857	5	FSM	ENSMUSG00000001017.16	ENSMUST00000076639.11	1842	5	-15	0	-1	0	multi-exon	FALSE	canonical	3	97	junction_1	581.611769138143	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	90416784	90406264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90407415_90410402_90410587_90413414_90413569_90414851_90414934_90416497
tx.12882	chr3	-	1862	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	-3	-538	-1	0	multi-exon	FALSE	canonical	3	97	junction_1	566.644233624591	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90416784	90406262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
tx.12883	chr3	-	613	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	63	1	-51	-1	multi-exon	FALSE	canonical	3	340	junction_1	21.5	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAATGTCTGTACCCTCT	NA	False	NA	NA	False	NA	NA	NA	90421636	90418341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90418672_90419302_90419457_90421507
tx.12884	chr3	+	2050	3	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-1156	0	intron_retention	FALSE	canonical	3	26	junction_1	185	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	90420585	90431888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_90422327_90423269_90423350_90431659
tx.12885	chr3	+	493	3	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	513	1	513	-1	3prime_fragment	FALSE	canonical	3	229	junction_1	83.5	30	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	90422254	90431887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_90422327_90423156_90423350_90431659
tx.12886	chr3	+	502	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	9	0	9	0	multi-exon	FALSE	canonical	3	443	junction_1	9.5	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAGAGTCAGTAGATT	NA	False	NA	NA	False	NA	NA	NA	93427803	93433594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_93427861_93431357_93431507_93433298
tx.12887	chr3	+	649	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	38	-2	38	2	multi-exon	TRUE	canonical	3	427	junction_2	41.5	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACGTAGAGTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	93462424	93471952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_93462519_93468250_93468403_93471549
tx.12888	chr3	+	1743	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	36	2	-5	-2	multi-exon	FALSE	canonical	3	18	junction_4	4.47213595499958	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTTGCTTCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	94217431	94239845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
tx.12889	chr3	+	1295	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	-62	-2	-18	2	multi-exon	FALSE	canonical	2	27	junction_5	8.74070935336486	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTATGTATGTGT	NA	False	NA	NA	False	NA	NA	NA	94320561	94333697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
tx.1289	chr10	+	6891	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	57	2323	14	975	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGGATTGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	11025230	11091016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
tx.12890	chr3	+	2525	14	FSM	ENSMUSG00000041912.13	ENSMUST00000166032.8	5692	14	-4	3171	-4	1	multi-exon	FALSE	canonical	1	1	junction_7	17.2732991609977	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCTAAAAACACATACTCA	NA	False	NA	NA	False	NA	NA	NA	94320575	94338804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097_94333420_94335161_94335323_94335452_94335626_94335966_94336032_94336346_94336499_94336663_94336766_94337357_94337455_94337866_94337959_94338124
tx.12891	chr3	-	6118	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	143	0	-24	0	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	NA	False	NA	NA	NA	94489880	94404850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
tx.12892	chr3	-	5330	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-30	-1769	-30	0	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	NA	False	NA	NA	NA	94489886	94404850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
tx.12893	chr3	-	2532	12	FSM	ENSMUSG00000005968.15	ENSMUST00000196733.5	2555	12	25	-2	24	0	multi-exon	FALSE	canonical	3	51	junction_9	16.8728840118112	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	6465	False	NA	NA	False	NA	NA	NA	94566154	94520063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
tx.12894	chr3	-	2532	12	Fusion	ENSMUSG00000081355.2_ENSMUSG00000005968.15	novel	2631	13	NA	NA	-41	0	multi-exon	FALSE	non_canonical	3	14	junction_10	27.6572887289176	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	94665464	94520063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94627329_94627396_94629191_94629282_94630124_94630212_94640266_94640369_94665341
tx.12895	chr3	-	2608	13	FSM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	22	1	22	1	multi-exon	FALSE	canonical	3	34	junction_11	22.9474036294596	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCCCGTGGGTCTTTT	6463	False	NA	NA	False	NA	NA	NA	94566156	94520064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
tx.12896	chr3	-	5006	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107273.9	5016	21	10	0	10	0	multi-exon	FALSE	canonical	2	3	junction_17	8.61553828846463	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCATTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	94693793	94667375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685400_94685510_94685581_94685688_94685790_94686460_94687330_94693686
tx.12897	chr3	-	4980	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107272.7	4963	21	-21	4	8	-4	multi-exon	FALSE	canonical	3	13	junction_12	7.64509646767129	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGTCTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	94693795	94667379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685376_94685510_94685581_94685688_94685790_94686460_94687330_94693686
tx.12898	chr3	+	6568	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	-171	2	-171	0	multi-exon	FALSE	canonical	3	43	junction_5	12.0021860148809	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGTGTTAAGTATA	NA	False	NA	NA	False	NA	NA	NA	94744706	94789635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
tx.12899	chr3	+	5764	15	ISM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	24856	0	-1305	0	3prime_fragment	FALSE	canonical	3	43	junction_1	10.7038043971024	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTTAAGTATATC	NA	False	NA	NA	False	NA	NA	NA	94769733	94789637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
tx.129	chr1	-	2500	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	-15	2	-15	-2	multi-exon	FALSE	canonical	3	24	junction_2	6.36832439151427	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCACTTTCTTATGGTTC	NA	False	NA	NA	False	NA	NA	NA	33946912	33891134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
tx.1290	chr10	+	5042	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	11	7	11	-7	multi-exon	FALSE	canonical	3	746	junction_2	70.5	1513	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCTAATTTTTGTT	7603	False	NA	NA	False	NA	NA	NA	11157084	11173789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_11157245_11165263_11167317_11170960
tx.12900	chr3	+	4993	11	ISM	ENSMUSG00000038902.15	ENSMUST00000107269.2	5966	17	33327	1	-272	-1	3prime_fragment	FALSE	canonical	3	58	junction_5	8.38808679020431	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTCTGTGTTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	94778350	94789634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
tx.12901	chr3	+	4711	10	ISM	ENSMUSG00000038902.15	ENSMUST00000107269.2	5966	17	34559	-2	960	0	3prime_fragment	FALSE	canonical	3	58	junction_4	8.65098295992077	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTTAAGTATATC	NA	False	NA	NA	False	NA	NA	NA	94779582	94789637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
tx.12902	chr3	+	2705	6	ISM	ENSMUSG00000038902.15	ENSMUST00000042402.12	4775	19	39222	-5	-720	5	3prime_fragment	FALSE	canonical	3	70	junction_1	4.88262224629348	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCCCACTGAACTCTTT	NA	False	NA	NA	False	NA	NA	NA	94784245	94788191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
tx.12903	chr3	+	3978	5	ISM	ENSMUSG00000038902.15	ENSMUST00000107269.2	5966	17	39547	-2	-395	0	3prime_fragment	FALSE	canonical	3	71	junction_1	4.12310562561766	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTTAAGTATATC	NA	False	NA	NA	False	NA	NA	NA	94784570	94789637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
tx.12904	chr3	-	925	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	27	231	27	-2	multi-exon	FALSE	canonical	3	1538	junction_1	134.402380931292	536	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGAGTTGGATTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	94794245	94791634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
tx.12905	chr3	+	1705	12	FSM	ENSMUSG00000068874.14	ENSMUST00000090839.12	1712	12	7	0	-3	0	multi-exon	FALSE	canonical	3	16	junction_2	7.58314791042644	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATCACTCTGTGACG	2661	False	NA	NA	False	NA	NA	NA	94840373	94852069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94840474_94844007_94844065_94844205_94844319_94844518_94844705_94845265_94845387_94846956_94847140_94847358_94847538_94849774_94849854_94849935_94850058_94851149_94851243_94851385_94851505_94851716
tx.12906	chr3	+	4071	10	NIC	ENSMUSG00000005774.13	novel	4014	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	11	junction_1	9.15302014516399	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCTTATGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	94861398	94868660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_94861493_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
tx.12907	chr3	+	4121	10	FSM	ENSMUSG00000005774.13	ENSMUST00000137088.8	4333	10	0	212	0	0	multi-exon	FALSE	canonical	3	32	junction_7	4.21637021355784	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCTTATGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	94861418	94868660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
tx.12908	chr3	+	3460	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	12	220	12	-158	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTGTTGCTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	94882053	94913934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
tx.12909	chr3	-	4042	4	Fusion	ENSMUSG00000084846.2_ENSMUSG00000086288.2_ENSMUSG00000019338.14	novel	1601	2	NA	NA	-2004	0	intron_retention	FALSE	canonical	0	0	junction_1	0.942809041582063	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCACTTCCTCCAGGA	NA	False	NA	-43	True	NA	NA	NA	94914184	94902353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr3_-_94903423_94904129_94904281_94906140_94906312_94911533
tx.1291	chr10	+	4585	2	ISM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	8490	4	8233	-4	3prime_fragment	FALSE	canonical	3	746	junction_1	0	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTAATTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	11165563	11173792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_11167317_11170960
tx.12910	chr3	-	4275	8	ISM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	3092	-101	-339	-11	3prime_fragment	FALSE	canonical	3	106	junction_4	14.577029735799	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94919457	94913911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655
tx.12911	chr3	-	4799	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	10	-11	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	41.4428060444694	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922519	94913911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922421
tx.12912	chr3	-	4740	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	30	-138	10	26	multi-exon	FALSE	canonical	1	6	junction_8	42.3657807080195	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCCTGGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	94922519	94913874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
tx.12913	chr3	-	4838	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-8	-11	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922767	94913911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
tx.12914	chr3	-	4788	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-17	26	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCCTGGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	94922776	94913874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
tx.12915	chr3	-	1277	10	FSM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	48	7	-14	3	multi-exon	FALSE	canonical	3	1001	junction_3	333.422654699207	942	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGCTTCAAATAGTGAT	NA	False	NA	NA	False	NA	NA	NA	94949877	94940011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
tx.12916	chr3	-	2830	6	ISM	ENSMUSG00000028126.17	ENSMUST00000005768.8	3480	15	40060	0	11797	0	3prime_fragment	FALSE	canonical	3	47	junction_2	4.45421149026402	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTCTAGCAATCATT	5867	False	NA	NA	False	NA	NA	NA	94974030	94965879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122
tx.12917	chr3	-	3578	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107236.9	3618	15	1	39	1	0	multi-exon	FALSE	canonical	3	17	junction_14	9.68798961896341	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTCTAGCAATCATT	1254	False	NA	NA	False	NA	NA	NA	95014185	94965879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
tx.12918	chr3	-	3581	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107233.9	3663	15	56	26	1	0	multi-exon	FALSE	canonical	3	28	junction_14	7.6080650011172	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTCTAGCAATCATT	1254	False	NA	NA	False	NA	NA	NA	95014185	94965879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990140_95013686
tx.12919	chr3	+	1318	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	21	117	1	-117	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	517	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGATGTGTAAGGT	2581	False	NA	NA	False	NA	NA	NA	95018353	95030245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
tx.1292	chr10	-	5774	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-23	0	-23	0	multi-exon	TRUE	canonical	3	61	junction_24	17.9698339045066	125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	12424646	12257933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
tx.12920	chr3	-	857	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	14	183	14	0	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1252	False	NA	NA	False	NA	NA	NA	95041308	95037029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
tx.12921	chr3	+	3854	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	22.3489160462629	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCAGCAAGTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	95067753	95081333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
tx.12922	chr3	+	3820	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.8459637241572	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCACATCAGCAAGTCT	NA	False	NA	NA	False	NA	NA	NA	95067769	95081329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
tx.12923	chr3	+	3845	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.2528268005561	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATCAGCAAGTCTTG	NA	False	NA	NA	False	NA	NA	NA	95067795	95081331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95068010_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
tx.12924	chr3	+	3915	19	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-4	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.003967972811	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGAATTTCACATCAG	NA	False	NA	NA	False	NA	NA	NA	95067763	95081322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
tx.12925	chr3	+	3955	19	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-25	-8	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	25.1555653710228	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTCACATCAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	95067742	95081327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
tx.12926	chr3	+	3868	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	24.8891989067994	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACATCAGCAAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	95067787	95081332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
tx.12927	chr3	+	3993	20	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-14	-8	combination_of_known_junctions	TRUE	canonical	3	19	junction_2	26.8983929948681	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTCACATCAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	95067753	95081327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
tx.12928	chr3	-	8719	10	FSM	ENSMUSG00000038766.17	ENSMUST00000136139.8	8661	10	-58	0	-58	0	multi-exon	FALSE	canonical	2	6	junction_7	7.40036702459854	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTATTGTTGAATTCT	8718	False	NA	NA	False	NA	NA	NA	95125285	95089076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95116150_95116248_95123524_95123580_95124899
tx.12929	chr3	-	1927	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	-4	0	-4	0	multi-exon	FALSE	canonical	3	62	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGGCTTAGTTTTTTC	6376	False	NA	NA	False	NA	NA	NA	95135992	95126445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95127775_95135394
tx.1293	chr10	+	5342	6	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	44	junction_3	31.1704988731332	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2914	False	NA	NA	False	NA	NA	NA	12966435	13007438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
tx.12930	chr3	+	2763	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	46	-4	-32	4	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	503	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	1920	False	NA	NA	False	NA	NA	NA	95136088	95143724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
tx.12931	chr3	+	2678	4	ISM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	3050	-4	-505	4	3prime_fragment	FALSE	canonical	3	380	junction_1	29.2232783924049	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	1158	False	NA	NA	False	NA	NA	NA	95139092	95143724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_95139404_95139859_95139971_95140798_95140891_95141560
tx.12932	chr3	-	1254	2	FSM	ENSMUSG00000068860.6	ENSMUST00000090815.6	1959	2	520	185	520	2	multi-exon	FALSE	canonical	3	31	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCATTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	95148389	95144415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95144541_95147260
tx.12933	chr3	-	2849	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	291	0	291	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	307	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4641	False	NA	NA	False	NA	NA	NA	95189096	95160984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
tx.12934	chr3	+	2763	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	62	2	62	1	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	NA	False	NA	NA	NA	95190316	95203475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
tx.12935	chr3	+	2822	10	FSM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	-24	2	-24	1	multi-exon	TRUE	canonical	3	18	junction_8	52.7870167352017	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	NA	False	NA	NA	NA	95190230	95203475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
tx.12936	chr3	+	3293	9	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	110	1	intron_retention	FALSE	canonical	3	130	junction_1	27.6936364531637	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTGCGTTCCTACCTT	NA	False	NA	NA	False	NA	NA	NA	95190364	95203473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
tx.12937	chr3	+	2052	9	ISM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	4791	3	-213	0	3prime_fragment	FALSE	canonical	3	134	junction_7	25.8215026673507	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	False	NA	NA	False	NA	NA	NA	95195045	95203474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
tx.12938	chr3	+	2296	10	NIC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	523	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57.7119282875444	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	95194032	95203477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95194184_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
tx.12939	chr3	+	2051	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	138	27	-25	-27	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	450	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTGTCAGACTATTAA	4456	False	NA	NA	False	NA	NA	NA	95222532	95230883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
tx.1294	chr10	-	4086	2	Antisense	novelGene_ENSMUSG00000019817.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGTAGAAGCATCTATC	NA	False	NA	NA	False	NA	NA	NA	13007438	13003236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_-_13006391_13006506
tx.12940	chr3	+	2265	10	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-53	-29	intron_retention	FALSE	canonical	3	406	junction_9	33.6675834125276	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGTGTCAGACTATT	4428	False	NA	NA	False	NA	NA	NA	95222504	95230881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
tx.12941	chr3	-	5674	21	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-18	0	intron_retention	FALSE	canonical	3	141	junction_10	31.3773803877889	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1670	False	NA	NA	False	NA	NA	NA	95264485	95230835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
tx.12942	chr3	-	4598	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	24	0	-22	0	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1666	False	NA	NA	False	NA	NA	NA	95264489	95230835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
tx.12943	chr3	-	4598	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107171.10	4573	22	-26	1	18	-1	multi-exon	FALSE	canonical	3	29	junction_11	47.7030211966969	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGGTCTGAAATGGT	1662	False	NA	NA	False	NA	NA	NA	95264493	95230836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
tx.12944	chr3	+	4353	22	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	83.8073051654387	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	NA	NA	NA	95341714	95404551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
tx.12945	chr3	+	4355	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	17	-1673	1	0	multi-exon	FALSE	canonical	0	0	junction_11	68.4937059524599	365	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	NA	NA	NA	95341715	95404551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
tx.12946	chr3	+	4319	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	6	0	6	0	multi-exon	TRUE	canonical	0	0	junction_10	84.9941174435031	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	NA	NA	NA	95341706	95404551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
tx.12947	chr3	+	1665	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	-13	-267	-12	188	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATAGTGTGTTATTAACA	NA	False	NA	NA	False	NA	NA	NA	95466975	95495170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
tx.12948	chr3	+	2829	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	7	0	7	0	multi-exon	FALSE	canonical	3	50	junction_3	6.87386354243376	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTCTCTCTGTACAT	NA	False	NA	NA	False	NA	NA	NA	95496251	95526553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
tx.12949	chr3	+	2264	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-26	1607	1	-1607	multi-exon	FALSE	canonical	3	422	junction_2	58	524	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCCGATCTTCTCGAA	383	False	NA	NA	False	NA	NA	NA	95532304	95537806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95532488_95534059_95534186_95535851
tx.1295	chr10	-	1812	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	26	459	26	-459	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	618	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGAATTGGTGTGCTCAT	NA	False	NA	NA	False	NA	NA	NA	13068886	13054342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
tx.12950	chr3	+	4166	2	ISM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-47	-3	-47	3	intron_retention	FALSE	canonical	3	785	junction_1	0	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGTGGTATGGGTCT	6370	False	NA	NA	False	NA	NA	NA	95566051	95570490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_95566799_95567071
tx.12951	chr3	+	3462	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-44	0	-44	0	multi-exon	FALSE	canonical	3	754	junction_2	15.5	1301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGGTGTGGTATGGG	6373	False	NA	NA	False	NA	NA	NA	95566054	95570487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95566799_95567071_95567320_95568017
tx.12952	chr3	+	2840	2	ISM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	850	1	781	-1	3prime_fragment	FALSE	canonical	3	754	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTAAGGTGTGGTATGG	7267	False	NA	NA	False	NA	NA	NA	95566948	95570486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_95567320_95568017
tx.12953	chr3	-	1057	3	ISM	ENSMUSG00000015850.12	ENSMUST00000015994.4	3856	18	10189	-3	-519	0	3prime_fragment	FALSE	canonical	3	22	junction_1	1.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCTTCGTTATGTTCA	NA	False	NA	NA	False	NA	NA	NA	95584980	95583510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_95584280_95584420_95584566_95584837
tx.12954	chr3	-	3892	18	FSM	ENSMUSG00000015850.12	ENSMUST00000015994.4	3856	18	-33	-3	-26	0	multi-exon	FALSE	canonical	1	3	junction_17	6.21918006589627	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCTTCGTTATGTTCA	NA	False	NA	NA	False	NA	NA	NA	95595202	95583510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592864_95595131
tx.12955	chr3	-	2402	18	FSM	ENSMUSG00000028107.15	ENSMUST00000029752.15	2400	18	0	-2	0	2	multi-exon	TRUE	canonical	1	178	junction_5	104.738626737206	482	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	NA	False	NA	NA	NA	95662183	95647285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
tx.12956	chr3	-	7019	11	NIC	ENSMUSG00000028106.14	novel	7756	11	NA	NA	-8	-796	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	33.6661551116251	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAAAACAAGGATTTT	10004	False	NA	NA	False	NA	NA	NA	95726183	95668448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
tx.12957	chr3	-	3870	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	-568	-4	-483	4	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTCATGAATTGAGTA	9965	False	NA	NA	False	NA	NA	NA	95726658	95679562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
tx.12958	chr3	-	3800	8	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-722	11910	-491	4	5prime_fragment	FALSE	canonical	3	55	junction_5	20.2957721544892	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTCATGAATTGAGTA	9957	False	NA	NA	False	NA	NA	NA	95726666	95679562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
tx.12959	chr3	-	2429	16	FSM	ENSMUSG00000015748.14	ENSMUST00000015892.14	2933	16	11	493	11	1	multi-exon	FALSE	canonical	3	400	junction_5	22.8428447343048	612	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATGATATTTTTCATAT	NA	False	NA	NA	False	NA	NA	NA	95763186	95737928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
tx.1296	chr10	-	3021	12	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-134	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.4630992371041	21	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGGAAACCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	13350290	13089126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129633_13137509_13137669_13142716_13142798_13167538_13167707_13349799
tx.12960	chr3	-	422	2	FSM	ENSMUSG00000054312.7	ENSMUST00000072587.5	405	2	0	-17	0	-3	multi-exon	FALSE	canonical	3	901	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGAAGCTGTCTTATTG	NA	False	NA	NA	False	NA	NA	NA	95777931	95769948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95770245_95777805
tx.12961	chr3	-	517	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	23	-52	23	52	multi-exon	FALSE	canonical	3	716	junction_2	92.5	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGAATGAGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	95778808	95769893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95770245_95777805_95777928_95778764
tx.12962	chr3	-	1412	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	34	3	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	52.0292225580971	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95789352	95785811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266
tx.12963	chr3	-	1963	5	FSM	ENSMUSG00000038550.11	ENSMUST00000159739.8	1939	5	-21	-3	5	3	multi-exon	FALSE	canonical	3	167	junction_2	14.8723737177358	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95789538	95785811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492
tx.12964	chr3	-	1430	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	-27	-5	-7	3	multi-exon	FALSE	canonical	3	105	junction_5	32.3604697122894	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95789570	95785811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
tx.12965	chr3	-	773	6	FSM	ENSMUSG00000038543.14	ENSMUST00000036360.13	752	6	0	-21	0	17	multi-exon	FALSE	canonical	2	9	junction_2	8.93532316147547	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTCTGTTCTAAAGTC	NA	False	NA	NA	False	NA	NA	NA	95799267	95791248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95791550_95792281_95792381_95795452_95795609_95796168_95796228_95797034_95797122_95799196
tx.12966	chr3	+	1742	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	-118	-23	-32	23	multi-exon	FALSE	canonical	3	108	junction_6	85.2670641116617	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGACTTGGCTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	95801248	95804780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
tx.12967	chr3	+	2069	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-25	819	-25	24	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACTTGGCTTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	95801255	95804781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
tx.12968	chr3	+	3238	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	33	3	1	-3	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	1811	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGCTTCAGTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	95836590	95854699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
tx.12969	chr3	+	3202	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	1	-1822	1	-3	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGCTTCAGTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	95836590	95854699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
tx.1297	chr10	-	3189	12	FSM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	8	-462	8	462	multi-exon	FALSE	canonical	3	9	junction_11	13.2378121085581	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTTCTTCTCTGCAG	9910	False	NA	NA	False	NA	NA	NA	13200025	13088676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13199807
tx.12970	chr3	-	1880	6	FSM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	-362	413	-362	-23	multi-exon	FALSE	canonical	3	9	junction_2	1.49666295470958	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATCAAAT	1029	False	NA	NA	False	NA	NA	NA	95903675	95896153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95896946_95898112_95898215_95898755_95898861_95899449_95899591_95902833_95902981_95903082
tx.12972	chr3	+	5767	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-96	-2296	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	25.2898475457819	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATGTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	96011742	96066150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_96012132_96016022_96016081_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
tx.12973	chr3	+	5861	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-9	-2304	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.7976808144557	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTTGTATCATGTTGT	NA	False	NA	NA	False	NA	NA	NA	96011829	96066142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
tx.12974	chr3	+	5725	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	1	-2296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.28626204439	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATGTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	96011839	96066150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
tx.12975	chr3	+	5742	12	FSM	ENSMUSG00000038495.15	ENSMUST00000035519.12	8043	12	2	2299	2	-2299	multi-exon	FALSE	canonical	3	30	junction_1	14.2242953608394	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATCATGTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	96011840	96066147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96012132_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
tx.12976	chr3	+	5600	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	-9	-2299	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	17.0565418486489	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATCATGTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	96011848	96066147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_96012132_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
tx.12977	chr3	+	2808	17	FSM	ENSMUSG00000045934.16	ENSMUST00000054356.16	2778	17	-30	0	-30	0	multi-exon	FALSE	canonical	2	2	junction_4	1.93245310421754	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTATTTTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	96069290	96079034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96069576_96069945_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078401
tx.12978	chr3	+	1547	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	196	172	-19	-172	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	1163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGTGAAGTAACTTTT	NA	False	NA	NA	False	NA	NA	NA	96079843	96084708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
tx.12979	chr3	+	1523	6	NNC	ENSMUSG00000068856.4	novel	1915	6	NA	NA	-15	-174	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	681.366450597621	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCTGGTGAAGTAACTT	NA	False	NA	NA	False	NA	NA	NA	96079847	96084706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081828_96083950_96084125_96084294
tx.1298	chr10	-	4433	13	NIC	ENSMUSG00000062866.17	novel	2808	13	NA	NA	-127	1200	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	18.0852533542909	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGACTTGCAACAGTGTT	NA	False	NA	NA	False	NA	NA	NA	13350283	13087938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13133320_13133561_13137509_13137669_13142716_13142798_13167538_13167707_13349799
tx.12980	chr3	+	4323	13	FSM	ENSMUSG00000038486.10	ENSMUST00000035371.9	4334	13	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_2	2.01900690659762	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGTGTCTGCTCCTGG	1765	False	NA	NA	False	NA	NA	NA	96088477	96102837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96088620_96091954_96092924_96094288_96094470_96095411_96095564_96095640_96095775_96096377_96096468_96096682_96096794_96096966_96097056_96097598_96097764_96097942_96098077_96099729_96099937_96100504_96100665_96101048
tx.12981	chr3	-	544	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	-27	212	-27	63	multi-exon	FALSE	canonical	3	441	junction_1	0	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTATTCCTTGATTTG	NA	False	NA	NA	False	NA	NA	NA	96104929	96104115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_96104596_96104865
tx.12982	chr3	-	3326	2	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCTTCTAGATTTAATT	NA	False	NA	NA	False	NA	NA	NA	96368281	96363641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr3_-_96366782_96368095
tx.12983	chr3	+	2803	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	3	21	0	4	multi-exon	FALSE	canonical	3	279	junction_1	78.2390371795021	362	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTCTTTTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	96465275	96469178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
tx.12984	chr3	+	2800	8	FSM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	0	-5	0	4	multi-exon	FALSE	canonical	3	228	junction_1	94.3746333956929	253	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTCTTTTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	96465275	96469178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
tx.12985	chr3	-	1241	7	FSM	ENSMUSG00000028104.15	ENSMUST00000145001.2	607	7	-4	-630	-4	0	multi-exon	TRUE	canonical	3	25	junction_6	26.9794160220137	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTAACAGAGTGATGT	NA	False	NA	NA	False	NA	NA	NA	96501479	96485187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96501399
tx.12986	chr3	-	1352	6	NIC	ENSMUSG00000028104.15	novel	1427	8	NA	NA	11	0	intron_retention	FALSE	canonical	3	25	junction_5	29.5540183393054	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTAACAGAGTGATGT	NA	False	NA	NA	False	NA	NA	NA	96501486	96485187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_96485905_96487113_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96501399
tx.12987	chr3	-	1403	8	FSM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	22	2	0	-2	multi-exon	FALSE	canonical	3	65	junction_6	13.8534604827436	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTAACAGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	96501475	96485189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
tx.12988	chr3	+	716	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	-4	1892	3	-1	multi-exon	FALSE	canonical	3	2213	junction_2	872.428931202995	458	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATTACTTTACTGTT	8638	False	NA	-74	True	NA	NA	NA	96537251	96539215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
tx.12989	chr3	+	714	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	3	1891	3	0	multi-exon	FALSE	canonical	3	2531	junction_2	745.762804114016	443	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8638	False	NA	-74	True	NA	NA	NA	96537251	96539216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
tx.1299	chr10	-	3434	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-114	454	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCTCAAACTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	13350270	13088684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
tx.12990	chr3	+	1591	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	196	637	-27	3	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTATTCAATTCAAGA	NA	False	NA	NA	False	NA	NA	NA	96542941	96552045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
tx.12991	chr3	+	1934	3	NIC	ENSMUSG00000028102.16	novel	2424	4	NA	NA	-30	2	intron_retention	FALSE	canonical	3	279	junction_2	10.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTATTCAATTCAAG	NA	False	NA	NA	False	NA	NA	NA	96542938	96552044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96543060_96543989_96544649_96550890
tx.12992	chr3	+	3857	13	FSM	ENSMUSG00000038354.14	ENSMUST00000048427.9	4052	13	197	-2	1	2	multi-exon	FALSE	canonical	3	6	junction_1	35.4200978730061	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	468	False	NA	NA	False	NA	NA	NA	96577643	96598350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
tx.12993	chr3	+	2459	5	NNC	ENSMUSG00000038354.14	novel	3295	14	NA	NA	2994	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	41.9463943623287	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	96590402	96598350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598240
tx.12994	chr3	+	3572	3	ISM	ENSMUSG00000038354.14	ENSMUST00000122960.6	3295	14	12956	-25	3190	2	intron_retention	FALSE	canonical	3	87	junction_1	5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	96590598	96598350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_96592491_96596461_96596552_96596760
tx.12995	chr3	+	2877	4	ISM	ENSMUSG00000038354.14	ENSMUST00000122960.6	3295	14	12970	-25	3204	2	intron_retention	FALSE	canonical	3	87	junction_1	10.2740233382816	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	96590612	96598350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_96592491_96596461_96596552_96596760_96596827_96597507
tx.12996	chr3	+	2270	5	ISM	ENSMUSG00000038354.14	ENSMUST00000122960.6	3295	14	13034	-24	3268	1	3prime_fragment	FALSE	canonical	3	58	junction_4	19.7294196569489	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTTGTGGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	96590676	96598349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598154
tx.12997	chr3	+	2862	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	-4	0	-4	0	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2584	False	NA	NA	False	NA	NA	NA	96603695	96613278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
tx.12998	chr3	+	3324	13	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	-4	0	-4	0	intron_retention	FALSE	canonical	3	88	junction_1	28.0132657067247	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2584	False	NA	NA	False	NA	NA	NA	96603695	96613278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
tx.12999	chr3	+	2822	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	1	108	1	0	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3288	False	NA	NA	False	NA	NA	NA	96604399	96613278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
tx.13	chr1	+	4079	6	NIC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	27	83	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	57.3006108169887	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	7159180	7242966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_7159441_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
tx.130	chr1	-	200	2	Antisense	novelGene_ENSMUSG00000103364.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTACTCCCTGTCTGCCC	NA	False	NA	NA	False	NA	NA	NA	34129728	34068803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr1_-_34068935_34129659
tx.1300	chr10	+	2279	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	55	3407	-28	85	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATAATATTTTAGT	NA	False	NA	NA	False	NA	NA	NA	13376799	13391372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
tx.13000	chr3	-	1099	7	NNC	ENSMUSG00000028100.12	novel	1110	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	23.4289706702336	21	4	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTAAGTGA	NA	False	NA	NA	False	NA	NA	NA	96615862	96613383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615277_96615492_96615643
tx.13001	chr3	-	2204	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	153	33	0	0	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	219	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTATCTGTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	96634791	96618838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
tx.13002	chr3	+	2088	7	NIC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	119	junction_1	220.417028985209	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAAGCTTCAGCGTCTC	4797	False	NA	NA	False	NA	NA	NA	96634981	96698466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96635227_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
tx.13003	chr3	+	2251	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-44	2	-44	-2	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	710	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAAGCTTCAGCGTCTC	4751	False	NA	NA	False	NA	NA	NA	96634935	96698466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
tx.13004	chr3	+	2130	8	NIC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	253.528165323391	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4816	False	NA	NA	False	NA	NA	NA	96635000	96698469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96635227_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
tx.13005	chr3	+	2817	9	FSM	ENSMUSG00000038298.15	ENSMUST00000058865.14	2406	9	-652	241	-39	-61	multi-exon	FALSE	canonical	3	10	junction_1	6.6226410894748	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATATACTTCAGCATTT	7067	False	NA	NA	False	NA	NA	NA	96736739	96778001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96737473_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
tx.13006	chr3	-	4570	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	25	3	-9	-3	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACATCTGAGCAATTACA	1888	False	NA	NA	False	NA	NA	NA	96812637	96775599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
tx.13007	chr3	+	1667	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	33	54	33	2	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	930	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCATGTTGAGATCAAAG	NA	False	NA	NA	False	NA	NA	NA	97066125	97083836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
tx.13008	chr3	-	4307	3	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	6301	-967	3803	1	3prime_fragment	FALSE	canonical	3	23	junction_1	8.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTTTTTGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	97117522	97110976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_97113294_97114462_97114724_97115793
tx.13009	chr3	-	4361	3	NNC	ENSMUSG00000038256.16	novel	4652	7	NA	NA	3710	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	13.5	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAACTGCCTTTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	97117615	97110979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_97113258_97114462_97114724_97115793
tx.1301	chr10	+	2038	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	61	-92	-22	92	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATTTTAGTATGTATT	NA	False	NA	NA	False	NA	NA	NA	13376805	13391379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
tx.13010	chr3	-	6148	10	FSM	ENSMUSG00000038256.16	ENSMUST00000046521.14	6102	10	-47	1	-47	-1	multi-exon	FALSE	canonical	3	19	junction_9	9.10162107389884	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAACTGCCTTTTTGTGCC	NA	False	NA	NA	False	NA	NA	NA	97134727	97110978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
tx.13011	chr3	-	2983	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.3504732250088	334	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATGTTGCTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	97517514	97468053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
tx.13012	chr3	+	4904	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	102	0	100	0	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTTACTTACTGAT	NA	False	NA	NA	False	NA	NA	NA	97565629	97581128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
tx.13013	chr3	+	4948	8	NNC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	145	-2	intron_retention	FALSE	canonical	3	6	junction_1	26.4683098926136	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAGTTACTTACTG	NA	False	NA	NA	False	NA	NA	NA	97565674	97581126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_97565777_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
tx.13014	chr3	+	5075	7	NIC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	145	-3	intron_retention	FALSE	canonical	3	65	junction_1	8.35995746932297	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTGAGTTACTTACT	NA	False	NA	NA	False	NA	NA	NA	97565674	97581125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
tx.13015	chr3	-	6145	17	FSM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	46	-6	-32	6	multi-exon	FALSE	canonical	3	63	junction_16	8.347903928532	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTCTTATAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	97675279	97646163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
tx.13016	chr3	+	2786	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	23	1	-3	-1	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	397	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCAGTGTGAAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	97808528	97830591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
tx.13017	chr3	+	9538	34	FSM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	-80	1042	-69	-1042	multi-exon	FALSE	canonical	2	4	junction_15	4.33979175423846	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTCATGTGGTGACATC	NA	False	NA	NA	False	NA	NA	NA	97920773	98056635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_97989232_97989356_98005411_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513_98038751_98041874_98041988_98042641_98043148_98044590_98044945_98045701_98045845_98045957_98046169_98046901_98046999_98048779_98048946_98050208_98050511_98051677_98051826_98052437_98052536_98053368
tx.13018	chr3	-	1842	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	51	0	51	0	multi-exon	FALSE	canonical	3	1070	junction_1	240.376770374213	2098	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	NA	False	NA	NA	NA	98247255	98220485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
tx.13019	chr3	+	2661	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	20	1729	-5	-729	multi-exon	FALSE	canonical	3	38	junction_2	3.66606055596467	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTGAGTTCACCTCG	NA	False	NA	NA	False	NA	NA	NA	99048403	99125790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
tx.1302	chr10	-	2091	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	21	17	2	9	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	134	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTGTTTAGTTAATGC	NA	False	NA	NA	False	NA	NA	NA	13428862	13399876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
tx.13020	chr3	+	3574	8	FSM	ENSMUSG00000027868.12	ENSMUST00000029462.10	3566	8	-7	-1	-7	1	multi-exon	FALSE	canonical	1	3	junction_1	3.73073281634303	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTGTTTGTTCATAT	NA	False	NA	NA	False	NA	NA	NA	99161068	99261576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_99161402_99216145_99216360_99220328_99220431_99222059_99222232_99223506_99223675_99233699_99233765_99247865_99247964_99259154
tx.13021	chr3	-	3373	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	NA	False	NA	NA	NA	100069719	100045495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
tx.13022	chr3	-	3428	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	4	0	4	0	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	1064	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	NA	False	NA	NA	NA	100069719	100045495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
tx.13023	chr3	+	2593	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	90	325	-47	1	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTTCTCAGAGTCAT	NA	False	NA	NA	False	NA	NA	NA	100069786	100113972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
tx.13024	chr3	-	4244	14	NIC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-3	-3230	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	34.4558717868481	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAGTGTCATGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	100592778	100472753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876_100592004_100592457
tx.13025	chr3	-	3352	14	NNC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-5	-2064	intron_retention	FALSE	canonical	1	2	junction_1	36.8126554004616	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTGTAGAAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	100592780	100471587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_100472432_100474945_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
tx.13026	chr3	-	5201	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	-461	3229	-461	-3229	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTCATGTTTGATT	NA	False	NA	NA	False	NA	NA	NA	100593280	100472752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
tx.13027	chr3	+	2344	6	FSM	ENSMUSG00000033233.18	ENSMUST00000037409.13	4612	6	-41	2309	-41	0	multi-exon	FALSE	canonical	2	8	junction_3	2.33238075793812	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGACTTCAAGTGCT	4290	False	NA	NA	False	NA	NA	NA	100829749	100839018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_100830716_100832256_100832991_100834540_100834671_100835370_100835486_100837132_100837260_100838746
tx.13028	chr3	-	4549	23	FSM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	-8	0	-8	0	multi-exon	TRUE	canonical	3	226	junction_14	22.0712594988997	519	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	100876987	100846175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
tx.13029	chr3	-	6085	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-184	1	-184	-1	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGTGTGAGGAAGT	4597	False	NA	NA	False	NA	NA	NA	101017778	100947548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
tx.1303	chr10	+	3222	5	NIC	ENSMUSG00000019808.9	novel	1466	6	NA	NA	326	643	intron_retention	FALSE	canonical	3	637	junction_3	67.9977021670586	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGTTTGAGTCGTTTT	NA	False	NA	NA	False	NA	NA	NA	13428963	13439763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_13429106_13432595_13432701_13435857_13437555_13438380_13438454_13438558
tx.13030	chr3	-	5280	7	ISM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	32889	-1	1332	1	3prime_fragment	FALSE	canonical	3	85	junction_1	11.323525167642	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGTGAGGAAGTTG	NA	False	NA	NA	False	NA	NA	NA	100984705	100947546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358
tx.13031	chr3	+	7446	12	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	19.1665169475527	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTTGCCACATGCTGA	236	False	NA	NA	False	NA	NA	NA	101284382	101370374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
tx.13032	chr3	+	5790	8	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	52913	-2905	52913	2	3prime_fragment	FALSE	canonical	3	13	junction_1	7.95907901553378	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGCCACATGCTGAAAT	NA	False	NA	NA	False	NA	NA	NA	101338566	101370377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
tx.13034	chr3	+	4897	5	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	62378	0	61123	0	3prime_fragment	FALSE	canonical	3	26	junction_2	5.24404424085076	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTGCCACATGCTGAA	NA	False	NA	NA	False	NA	NA	NA	101346776	101370375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
tx.13035	chr3	-	3657	23	FSM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	18	4	18	-4	multi-exon	FALSE	canonical	3	297	junction_17	44.2662166204014	647	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	101511982	101483538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
tx.13036	chr3	-	2875	3	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	974	818	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_2	70.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATAGCCTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	102072282	102063214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_102065814_102070614_102070850_102072241
tx.13037	chr3	-	2833	2	ISM	ENSMUSG00000027860.16	ENSMUST00000161021.2	818	5	3396	-2279	2406	816	3prime_fragment	FALSE	canonical	3	166	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTCATAGCCTACTCTT	NA	False	NA	NA	False	NA	NA	NA	102070850	102063216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_102065814_102070614
tx.13038	chr3	-	3808	4	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	37012	2319	-708	815	3prime_fragment	FALSE	canonical	3	166	junction_1	66.1379030679248	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTCATAGCCTACTCT	NA	False	NA	NA	False	NA	NA	NA	102074997	102063217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153
tx.13039	chr3	-	3159	4	ISM	ENSMUSG00000027860.16	ENSMUST00000161021.2	818	5	964	-2279	-26	816	3prime_fragment	FALSE	canonical	3	141	junction_3	77.2801541291309	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTCATAGCCTACTCTT	NA	False	NA	NA	False	NA	NA	NA	102073282	102063216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088
tx.1304	chr10	+	829	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	316	321	316	-321	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAAAGACTATTTCCA	NA	False	NA	NA	False	NA	NA	NA	13428953	13438799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
tx.13040	chr3	-	4190	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	23	2318	23	816	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTCATAGCCTACTCTT	NA	False	NA	NA	False	NA	NA	NA	102111986	102063216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
tx.13041	chr3	-	1333	3	FSM	ENSMUSG00000027860.16	ENSMUST00000160226.8	617	3	-708	-8	-708	8	multi-exon	FALSE	canonical	3	188	junction_2	64	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTTGTGTGTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	102074997	102070493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_102070850_102072670_102072804_102074153
tx.13042	chr3	-	1934	7	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	-28	9426	-28	177	5prime_fragment	FALSE	canonical	3	72	junction_3	85.9348913745491	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGCCGTCTCTCTGGCC	NA	False	NA	NA	False	NA	NA	NA	102112037	102070324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
tx.13043	chr3	-	829	3	FSM	ENSMUSG00000027860.16	ENSMUST00000162361.2	472	3	-1	-356	-1	179	multi-exon	FALSE	canonical	3	141	junction_2	87.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGTCTCTCTGGCCCA	NA	False	NA	NA	False	NA	NA	NA	102073257	102070322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_102070850_102072670_102072804_102073088
tx.13044	chr3	+	4012	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	403	69	-25	-69	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGTTAAAGAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	102642247	102679539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
tx.13045	chr3	-	3275	32	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	0	3	combination_of_known_junctions	TRUE	canonical	3	64	junction_8	14.4403037547212	70	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	102843416	102725811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
tx.13046	chr3	-	3158	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	16.640279110907	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	102843416	102725811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
tx.13047	chr3	+	2370	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	27	4978	5	1287	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	315	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCTCATTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	102903050	102910797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
tx.13048	chr3	+	4053	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	-11	-193	-11	-2	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	894	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	102927911	102965500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
tx.13049	chr3	+	4143	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	173	2	-8	-2	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	804	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	102927914	102965500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
tx.1305	chr10	-	1562	6	FSM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	87	junction_1	15.3179633110933	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTGCACTGTTCA	NA	False	NA	NA	False	NA	NA	NA	13744732	13522797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
tx.13050	chr3	+	4380	6	FSM	ENSMUSG00000027852.15	ENSMUST00000200069.5	831	6	-39	-3510	-20	3	multi-exon	FALSE	canonical	3	47	junction_5	301.169453962383	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTTTCCCTACTGCCA	NA	False	NA	NA	False	NA	NA	NA	102965643	102975225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971549
tx.13051	chr3	+	4420	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	43	7	-20	1	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	839	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATTTTCCCTACTGC	NA	False	NA	NA	False	NA	NA	NA	102965643	102975223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
tx.13052	chr3	+	4625	6	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	302	7	-7	1	3prime_fragment	FALSE	canonical	3	741	junction_3	37.2751928231096	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATTTTCCCTACTGC	NA	False	NA	NA	False	NA	NA	NA	102965902	102975223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
tx.13053	chr3	+	4963	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	491	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	103009975	103077054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
tx.13054	chr3	+	1062	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	83	322	-11	3	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	1607	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	5012	False	NA	NA	False	NA	NA	NA	103079053	103086146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
tx.13055	chr3	+	5235	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	426	3214	-160	-1	multi-exon	TRUE	canonical	3	95	junction_7	11.658340255239	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCTTTGGGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	103187034	103262877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
tx.13056	chr3	+	5176	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-153	2	-153	-2	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCCTTTGGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	103187041	103262876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
tx.13057	chr3	+	5820	6	ISM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	65000	13	2611	-13	3prime_fragment	FALSE	canonical	3	101	junction_4	11.4960862905599	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAAATGAATTTCCTT	NA	False	NA	NA	False	NA	NA	NA	103251608	103266078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
tx.13058	chr3	-	8068	16	FSM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-41	-3842	-22	-3	multi-exon	FALSE	canonical	2	63	junction_1	12.16260206078	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCTGGTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	103698613	103647133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
tx.13059	chr3	-	2292	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	61	1992	-5	288	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTCAAGTCCCAGATAAA	NA	False	NA	NA	False	NA	NA	NA	103716699	103709912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
tx.1306	chr10	-	1463	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-16	-8	3	8	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATGGCTGCAGTTAGA	NA	False	NA	NA	False	NA	NA	NA	13744717	13528186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
tx.13060	chr3	+	2836	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	-37	0	-2	0	multi-exon	FALSE	canonical	3	54	junction_7	8.73053390247253	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCTGTCGTCACTT	NA	False	NA	NA	False	NA	NA	NA	103716906	103729341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
tx.13061	chr3	+	6281	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	415	16	-1	7	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGTTTCAAAATGAATA	NA	False	NA	NA	False	NA	NA	NA	103821881	103873936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
tx.13062	chr3	+	4323	8	FSM	ENSMUSG00000044098.15	ENSMUST00000051139.13	4762	8	446	-7	-1	7	multi-exon	FALSE	canonical	3	18	junction_7	18.1411697753019	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGTTTCAAAATGAATA	NA	False	NA	NA	False	NA	NA	NA	103821881	103873936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869932_103871889
tx.13063	chr3	+	5585	6	NIC	ENSMUSG00000044098.15	novel	6712	7	NA	NA	21	7	intron_retention	FALSE	canonical	3	10	junction_1	24.576411454889	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGTTTCAAAATGAATA	NA	False	NA	NA	False	NA	NA	NA	103821903	103873936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_103822470_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
tx.13064	chr3	+	3190	18	NIC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	19.101984534304	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	103875655	103914806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
tx.13065	chr3	+	3111	18	FSM	ENSMUSG00000058388.15	ENSMUST00000090685.11	3006	18	-107	2	-27	0	multi-exon	FALSE	canonical	2	12	junction_6	21.1329618398503	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	103875654	103914804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
tx.13066	chr3	+	3241	19	FSM	ENSMUSG00000058388.15	ENSMUST00000063717.14	3327	19	86	0	-22	0	multi-exon	FALSE	canonical	3	55	junction_6	13.8399136513399	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	103875659	103914804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
tx.13067	chr3	+	3027	17	NIC	ENSMUSG00000058388.15	novel	3006	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_5	25.1939352821269	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	103875683	103914806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
tx.13068	chr3	-	6585	21	FSM	ENSMUSG00000052539.16	ENSMUST00000121198.8	5912	21	-307	-366	-36	0	multi-exon	FALSE	canonical	3	26	junction_1	8.46404158779953	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	104127726	103920574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_103923385_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
tx.13069	chr3	-	6679	22	FSM	ENSMUSG00000052539.16	ENSMUST00000064371.14	6640	22	-39	0	-39	0	multi-exon	FALSE	canonical	3	11	junction_1	11.0079336469023	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	104127729	103920574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_103923385_103923917_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
tx.1307	chr10	-	4723	3	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	34	145238	34	458	5prime_fragment	FALSE	canonical	3	116	junction_2	6.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13744667	13673432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_13677694_13704986_13705143_13744361
tx.13070	chr3	-	3959	21	FSM	ENSMUSG00000052539.16	ENSMUST00000122303.2	3827	21	-181	49	-45	-49	multi-exon	FALSE	canonical	3	21	junction_1	9.00152764812729	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTTTTCAATCTCCCT	NA	False	NA	NA	False	NA	NA	NA	104127735	103923833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
tx.13071	chr3	-	7145	18	FSM	ENSMUSG00000032913.14	ENSMUST00000198332.2	3946	18	-52	-3147	10	0	multi-exon	FALSE	canonical	3	19	junction_3	20.1729545898912	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTGGTCTTCTCTTGC	NA	False	NA	NA	False	NA	NA	NA	104419224	104361296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
tx.13072	chr3	-	7015	17	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	19.5220228203944	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGTCTTCTCTTGCC	NA	False	NA	NA	False	NA	NA	NA	104419222	104361295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_104365281_104368716_104369005_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
tx.13073	chr3	-	7170	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-74	3	4	-2	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTCTGGTCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	104419230	104361298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
tx.13074	chr3	+	3226	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	-4	1204	-4	-1204	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	760	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTCCGCATGTTTAT	NA	False	NA	NA	False	NA	NA	NA	104545979	104564574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
tx.13075	chr3	+	2563	2	ISM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	14167	1205	14167	-1205	3prime_fragment	FALSE	canonical	3	524	junction_1	0	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTCTTCCGCATGTTTA	NA	False	NA	NA	False	NA	NA	NA	104560150	104564573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_104560904_104562763
tx.13076	chr3	+	1718	10	FSM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	3	0	3	0	multi-exon	FALSE	canonical	3	56	junction_1	13.4200881305638	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	NA	NA	NA	104688374	104693334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
tx.13077	chr3	+	2881	9	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	31	0	intron_retention	FALSE	canonical	3	74	junction_7	10.7470926301023	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	NA	NA	NA	104688402	104693334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
tx.13078	chr3	+	1859	9	ISM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	11	3	11	-3	intron_retention	FALSE	canonical	3	56	junction_1	13.9977676791694	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	NA	NA	NA	104688382	104693331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713
tx.13079	chr3	+	1665	10	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_8	22.6949714341098	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	NA	NA	NA	104688373	104693331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692559_104692713_104692866_104693017
tx.1308	chr10	-	4429	12	ISM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	106494	-1982	106453	3	3prime_fragment	FALSE	canonical	3	83	junction_7	11.1932683429974	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTCCTTTATGAGGGA	NA	False	NA	NA	False	NA	NA	NA	14314286	14278323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163
tx.13080	chr3	+	1091	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	111	0	-35	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	104696314	104701775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
tx.13081	chr3	-	3535	20	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	30	-4	26	4	intron_retention	TRUE	canonical	3	1102	junction_11	86.7727314610285	1861	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	104725591	104702147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
tx.13082	chr3	-	3456	21	FSM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	8	-4	4	4	multi-exon	FALSE	canonical	3	138	junction_20	265.434944948852	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	104725613	104702147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
tx.13083	chr3	-	3019	11	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	-1	-157	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	532.597230559829	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTCTGTCCTTTCT	9277	False	NA	NA	False	NA	NA	NA	104771717	104730251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_104732441_104732722_104732786_104735240_104735328_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
tx.13084	chr3	-	3498	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	-463	158	-463	-158	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	317	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTGTCTGTCCTTTC	8710	False	NA	NA	False	NA	NA	NA	104772284	104730252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
tx.13085	chr3	+	1952	14	FSM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	572	3204	4	0	multi-exon	FALSE	canonical	3	59	junction_11	6.94526359402813	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTAGTGTATTTTCTTT	652	False	NA	NA	False	NA	NA	NA	104772390	104834176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
tx.13086	chr3	+	2553	15	NIC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	-9	-20	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	19.3639945701884	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATACAATTTTTCTTT	71	False	NA	NA	False	NA	NA	NA	104771809	104834156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104788280_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
tx.13087	chr3	-	4857	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	-23	0	-20	0	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTCTGGGGGAAAAGTC	1449	False	NA	NA	False	NA	NA	NA	104960290	104909232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
tx.13088	chr3	-	2774	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	126	5	4	-5	multi-exon	FALSE	canonical	3	276	junction_2	22.5302019520465	445	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTCAGTTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	105594764	105585590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
tx.13089	chr3	-	2413	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-29	23	-29	-23	multi-exon	TRUE	canonical	3	409	junction_7	23.7667234354495	294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTAATAAACTTAGCTA	NA	False	NA	NA	False	NA	NA	NA	105708681	105634605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
tx.1309	chr10	-	6950	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	213	-5	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTATTCAGTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	14421190	14278331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
tx.13090	chr3	-	1135	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	836	0	1	0	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	1777	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAGTTTCATACTCTG	NA	False	NA	NA	False	NA	NA	NA	105866579	105850013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
tx.13091	chr3	+	3671	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-32	-387	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGGGGCTCTATCT	NA	False	NA	NA	False	NA	NA	NA	105866791	105876689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
tx.13092	chr3	+	3183	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	107	392	-32	-392	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	1145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATCTGCTTGGGGGCTC	NA	False	NA	NA	False	NA	NA	NA	105866791	105876684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
tx.13093	chr3	+	2005	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-38	674	combination_of_known_junctions	FALSE	canonical	3	115	junction_8	275.350057782793	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTTACTTATTACCT	NA	False	NA	NA	False	NA	NA	NA	105866785	105875517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478
tx.13094	chr3	+	4278	8	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-32	-392	intron_retention	FALSE	canonical	3	910	junction_4	51.9076888646114	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATCTGCTTGGGGGCTC	NA	False	NA	NA	False	NA	NA	NA	105866791	105876684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
tx.13095	chr3	+	5917	2	ISM	ENSMUSG00000105852.5	ENSMUST00000137168.3	1580	4	-3398	7041	3214	-7041	5prime_fragment	FALSE	canonical	3	1004	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTTGGGGGCTCTA	NA	False	NA	NA	False	NA	NA	NA	105870032	105876686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_105873742_105874478
tx.13096	chr3	+	3976	12	FSM	ENSMUSG00000027901.13	ENSMUST00000029508.11	4050	12	21	53	2	-53	multi-exon	FALSE	canonical	1	2	junction_1	1.52662323852242	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTCTGAGATCATATA	NA	False	NA	NA	False	NA	NA	NA	106389767	106410293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_106390030_106394188_106394365_106395166_106395280_106395887_106395958_106397650_106397729_106398541_106398683_106399744_106399894_106402146_106402325_106406133_106406176_106406536_106406622_106407070_106407311_106407851
tx.13097	chr3	-	1972	8	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	7978	-3	7978	3	3prime_fragment	FALSE	canonical	3	195	junction_5	22.3396782539453	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTTCTCAATTTTATT	NA	False	NA	NA	False	NA	NA	NA	106446920	106410295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505
tx.13098	chr3	-	2048	9	FSM	ENSMUSG00000040774.16	ENSMUST00000068301.11	2814	9	44	722	-15	1	multi-exon	FALSE	canonical	3	190	junction_8	25.7924407530579	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTTTTCTCAATTTTA	NA	False	NA	NA	False	NA	NA	NA	106455074	106410297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446920_106454995
tx.13099	chr3	+	2189	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	36	1046	3	-1	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTTGTCATGAAAATG	NA	False	NA	NA	False	NA	NA	NA	106455149	106482160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
tx.131	chr1	+	8960	42	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-8487	0	combination_of_known_junctions	TRUE	canonical	3	43	junction_1	35.6811679542503	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGGAATACTTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	34267189	34347733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
tx.1310	chr10	-	6867	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-409	-1976	214	-3	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTCAGTTCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	14421189	14278329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
tx.13100	chr3	+	1657	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	12	0	-3	0	multi-exon	FALSE	canonical	3	21	junction_1	9.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	106629220	106643893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_106629423_106641673_106641956_106642720
tx.13101	chr3	+	3170	4	FSM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	-68	1	-25	-1	multi-exon	FALSE	canonical	2	11	junction_1	11.8415464455544	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATGTATGGCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	106629183	106643889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_106629423_106638978_106640459_106641673_106641956_106642720
tx.13102	chr3	+	2936	3	ISM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	9726	-3	-1252	0	3prime_fragment	FALSE	canonical	3	25	junction_1	7.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	106638977	106643893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_106640459_106641673_106641956_106642720
tx.13103	chr3	+	737	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	6	0	6	0	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	284	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3157	False	NA	NA	False	NA	NA	NA	107186320	107191398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
tx.13104	chr3	-	3210	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	613	520	41	-520	multi-exon	FALSE	canonical	3	61	junction_1	0	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	107240376	107233256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107233621_107237530
tx.13105	chr3	-	3219	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	-4	0	-4	0	multi-exon	FALSE	canonical	3	175	junction_2	23.6893963620857	423	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	107539014	107519847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
tx.13106	chr3	-	3843	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	18	2	18	-2	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	1586	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAGTAGTCGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	107603858	107570437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
tx.13107	chr3	+	928	8	FSM	ENSMUSG00000004032.11	ENSMUST00000004134.11	945	8	15	2	0	-2	multi-exon	FALSE	canonical	3	47	junction_1	3.52252228741084	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTCTAGATGGATT	NA	False	NA	NA	False	NA	NA	NA	107803151	107806000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_107803315_107803613_107803690_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
tx.13108	chr3	-	1148	8	FSM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	5	0	5	0	multi-exon	FALSE	canonical	3	28	junction_3	8.51649060616507	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	1795	False	NA	NA	False	NA	NA	NA	107851060	107846162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850913
tx.13109	chr3	-	1253	10	Fusion	ENSMUSG00000068762.12_ENSMUSG00000089664.3	novel	1153	8	NA	NA	-2469	0	multi-exon	FALSE	canonical	2	6	junction_8	17.5358539238757	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	5768	False	NA	NA	False	NA	NA	NA	107862906	107846162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107858112_107858224_107860362_107860439_107862841
tx.1311	chr10	-	6778	23	NIC	ENSMUSG00000039116.8	novel	4482	24	NA	NA	215	-22	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	22.1708243993194	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGTTCATGTTCCA	NA	False	NA	NA	False	NA	NA	NA	14421188	14278348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
tx.13110	chr3	-	1054	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	10	0	10	0	multi-exon	FALSE	canonical	3	626	junction_6	40.3692143766479	304	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2052	False	NA	NA	False	NA	NA	NA	107893759	107889017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
tx.13111	chr3	-	1166	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	121	2	-46	-2	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	324	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGAGTTGTGTCTTTTT	6704	False	NA	NA	False	NA	NA	NA	107925168	107919572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
tx.13112	chr3	-	1480	8	FSM	ENSMUSG00000027890.18	ENSMUST00000178808.8	1462	8	-16	-2	-9	0	multi-exon	FALSE	canonical	3	22	junction_7	32.937169624258	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	107952191	107947723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952160
tx.13113	chr3	-	1687	8	FSM	ENSMUSG00000027890.18	ENSMUST00000029489.15	1707	8	20	0	-8	0	multi-exon	FALSE	canonical	3	51	junction_7	25.3175747621437	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	107952190	107947723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107951952
tx.13114	chr3	-	1460	8	NNC	ENSMUSG00000027890.18	novel	1707	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.6533130612605	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	107952186	107947723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107952160
tx.13115	chr3	-	1655	8	NNC	ENSMUSG00000027890.18	novel	1707	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.2329948866726	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	107952173	107947723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107951952
tx.13116	chr3	-	3868	18	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-20	0	intron_retention	FALSE	canonical	3	124	junction_17	33.4984377056561	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	107993987	107981377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
tx.13117	chr3	-	3948	17	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-14	0	intron_retention	TRUE	canonical	3	199	junction_8	20.0187412191676	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	107993981	107981377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
tx.13118	chr3	-	3602	19	FSM	ENSMUSG00000027889.18	ENSMUST00000102637.8	3586	19	-14	-2	-14	0	multi-exon	FALSE	canonical	3	124	junction_18	33.5369705707258	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	107993981	107981377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
tx.13119	chr3	-	3694	18	FSM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	-44	0	-20	0	multi-exon	FALSE	canonical	3	198	junction_12	21.7907634157735	210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	107993987	107981377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
tx.1312	chr10	-	3020	4	ISM	ENSMUSG00000039116.8	ENSMUST00000208429.3	4326	25	325	57703	-155	25178	5prime_fragment	FALSE	canonical	3	97	junction_3	9.8770215933527	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGATGTTTATTGTCAA	NA	False	NA	NA	False	NA	NA	NA	14421078	14341344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_14343501_14344506_14344849_14411597_14411699_14420657
tx.13120	chr3	+	1876	9	Fusion	ENSMUSG00000009108.16_ENSMUSG00000056411.3	novel	2518	7	NA	NA	787	0	multi-exon	FALSE	canonical	2	2	junction_7	1.61535599791501	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTGGGTTCCCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	107994078	108008746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr3_+_107994208_108000509_108000683_108002456_108002500_108002754_108002897_108003665_108003824_108005282_108005412_108005626_108005757_108007303_108007458_108007928
tx.13121	chr3	-	3240	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	19	3	19	-3	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	760	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCACTTTTATTTGTC	NA	False	NA	NA	False	NA	NA	NA	108053443	108014598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
tx.13122	chr3	+	5068	2	FSM	ENSMUSG00000050947.10	ENSMUST00000050909.7	5030	2	-36	-2	-36	1	multi-exon	FALSE	canonical	3	5	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGGTTGGTTTATTT	500	False	NA	NA	False	NA	NA	NA	108093614	108099094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108093995_108094406
tx.13123	chr3	-	4188	3	FSM	ENSMUSG00000048796.8	ENSMUST00000106655.2	4275	3	0	87	0	-3	multi-exon	FALSE	canonical	0	0	junction_2	2.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTATGCTCTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	108108150	108103089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108107032_108107440_108107479_108107942
tx.13124	chr3	-	2725	12	FSM	ENSMUSG00000048997.18	ENSMUST00000102633.9	3044	12	345	-26	-103	26	multi-exon	FALSE	canonical	3	3	junction_11	14.3354153142281	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATATAAAAACCAGA	3279	False	NA	NA	False	NA	NA	NA	108117905	108109511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108116232_108116412_108117660
tx.13125	chr3	-	2455	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	-64	-4	-40	-2	multi-exon	FALSE	canonical	3	27	junction_7	7.33212111192934	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTGTCTCCCTGTTCTG	3342	False	NA	NA	False	NA	NA	NA	108117842	108109539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108117660
tx.13126	chr3	+	998	9	FSM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	241	0	241	0	multi-exon	FALSE	canonical	3	2544	junction_4	248.775972262194	978	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGTCTGTGATC	NA	False	NA	NA	False	NA	NA	NA	108164482	108187290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
tx.13127	chr3	+	6822	20	FSM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	-26	0	-17	0	multi-exon	FALSE	canonical	3	21	junction_7	9.89893527949294	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACTAAGATGAGTAAGCT	4963	False	NA	NA	False	NA	NA	NA	108191380	108268827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
tx.13128	chr3	+	6908	21	NNC	ENSMUSG00000068747.15	novel	6836	21	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	14.2123186004255	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGATGAGTAAGCTACA	4976	False	NA	NA	False	NA	NA	NA	108191393	108268830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108262787_108262887_108263546_108263654_108263892_108264005_108264544
tx.13129	chr3	+	3333	20	NNC	ENSMUSG00000068747.15	novel	6836	21	NA	NA	0	-3396	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	9.56679390947517	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTCAGGCTGTACTTT	4980	False	NA	NA	False	NA	NA	NA	108191397	108265358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
tx.1313	chr10	+	732	2	FSM	ENSMUSG00000111888.2	ENSMUST00000220256.2	1003	2	602	-331	602	331	multi-exon	FALSE	canonical	3	15	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTACGCCTATTTCTG	NA	False	NA	NA	False	NA	NA	NA	14420835	14427106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_14421099_14426637
tx.13130	chr3	+	1742	7	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-14	-15	intron_retention	FALSE	canonical	3	155	junction_1	118.602510747267	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTTTCTGTATAT	7018	False	NA	NA	False	NA	NA	NA	108291140	108295480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_108291212_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
tx.13131	chr3	+	1648	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	-23	62	-3	-10	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7029	False	NA	NA	False	NA	NA	NA	108291151	108295485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
tx.13132	chr3	+	1757	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	-5	-10	intron_retention	FALSE	canonical	3	329	junction_1	60.1405760605009	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7039	False	NA	NA	False	NA	NA	NA	108291161	108295485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_108291243_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
tx.13133	chr3	+	1668	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	8	10	-4	-10	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7040	False	NA	NA	False	NA	NA	NA	108291162	108295485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
tx.13134	chr3	-	1875	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	-12	1707	-1	40	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	2880	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTCTGCTGGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	108352526	108333887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
tx.13135	chr3	-	2807	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	62	-5	62	5	multi-exon	FALSE	canonical	3	163	junction_1	15	298	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTTGTCATGTGTG	5336	False	NA	NA	False	NA	NA	NA	108469720	108463735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108466277_108467502_108467635_108469586
tx.13136	chr3	-	2746	3	FSM	ENSMUSG00000068732.6	ENSMUST00000106622.3	2752	3	6	0	6	0	multi-exon	FALSE	canonical	1	2	junction_2	80.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	5576	False	NA	NA	False	NA	NA	NA	108469480	108463740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108466277_108467502_108467635_108469402
tx.13137	chr3	+	1288	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	-1	1156	0	-3	multi-exon	FALSE	canonical	3	149	junction_1	10.4986771653491	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTACTTGAGTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	108479013	108489382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
tx.13138	chr3	+	5303	14	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	82	2	9	-2	intron_retention	FALSE	canonical	3	33	junction_5	8.49085829325946	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCCTTTTCTCACGG	NA	False	NA	NA	False	NA	NA	NA	108498676	108553033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377
tx.13139	chr3	+	4152	15	NIC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	13.7300876225335	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	False	NA	NA	False	NA	NA	NA	108498661	108553035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
tx.1314	chr10	-	1340	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	56	578	-4	22	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	443	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTGGAGATCCTGACTT	NA	False	NA	NA	False	NA	NA	NA	14581248	14531076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
tx.13140	chr3	+	4153	15	FSM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	69	0	-4	0	multi-exon	FALSE	canonical	3	33	junction_5	8.19064922297845	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	False	NA	NA	False	NA	NA	NA	108498663	108553035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
tx.13141	chr3	+	2032	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	11	0	11	0	multi-exon	TRUE	canonical	3	66	junction_1	36.8117839559091	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6607	False	NA	NA	False	NA	NA	NA	108561239	108586156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
tx.13142	chr3	+	2087	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	23.1716555264122	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6623	False	NA	NA	False	NA	NA	NA	108561255	108586156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
tx.13143	chr3	-	3036	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	11	451	11	-451	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTATCTGTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	108629614	108586404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
tx.13144	chr3	-	3181	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGTGTTAATCAAGTC	NA	False	NA	NA	False	NA	NA	NA	108629615	108585956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
tx.13145	chr3	-	2457	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	-38	0	-23	0	multi-exon	FALSE	canonical	1	38	junction_10	22.0233461984726	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGAGTTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	108747865	108700491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
tx.13146	chr3	-	3094	7	NIC	ENSMUSG00000027881.15	novel	3050	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	165.490852382306	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGGTGTTGGTTTCCCC	6855	False	NA	NA	False	NA	NA	NA	108819038	108810120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815651_108815721_108818479
tx.13147	chr3	-	3090	7	FSM	ENSMUSG00000027881.15	ENSMUST00000129273.8	3050	7	-42	2	-11	0	multi-exon	FALSE	canonical	3	28	junction_5	171.074707527313	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6839	False	NA	NA	False	NA	NA	NA	108819054	108810122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
tx.13148	chr3	-	3035	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	-9	0	-9	0	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	373	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6841	False	NA	NA	False	NA	NA	NA	108819052	108810122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
tx.13149	chr3	-	5472	5	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	234	junction_3	120.261174117003	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6856	False	NA	NA	False	NA	NA	NA	108819037	108810122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815651_108815721_108818479
tx.1315	chr10	+	1957	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	4	18	4	13	multi-exon	FALSE	canonical	3	306	junction_1	0	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCTAAAAGTCAGT	NA	False	NA	NA	False	NA	NA	NA	17598969	17601404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_17599208_17599685
tx.13150	chr3	-	3858	2	FSM	ENSMUSG00000027881.15	ENSMUST00000125208.2	977	2	-1427	-1454	-894	0	multi-exon	FALSE	canonical	3	536	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	4047	False	NA	NA	False	NA	NA	NA	108814328	108810122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108812079_108812426
tx.13151	chr3	+	3448	10	FSM	ENSMUSG00000040322.11	ENSMUST00000029477.11	3431	10	-17	0	-17	0	multi-exon	FALSE	canonical	1	3	junction_3	3.55902608401044	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTTTTCTAATTGTC	4458	False	NA	NA	False	NA	NA	NA	109030447	109075773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641
tx.13152	chr3	-	3050	2	FSM	ENSMUSG00000049300.12	ENSMUST00000190378.2	3051	2	4	-3	4	0	multi-exon	FALSE	canonical	3	26	junction_1	0	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAACCTGGTCTATTCT	NA	False	NA	NA	False	NA	NA	NA	110158305	110153424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_110155172_110157002
tx.13153	chr3	-	3629	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	32	227	32	170	multi-exon	FALSE	canonical	3	32	junction_1	23.6233195061532	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATCTAGTTAATTA	NA	False	NA	NA	False	NA	NA	NA	113423766	113398942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
tx.13154	chr3	-	1818	15	FSM	ENSMUSG00000027981.15	ENSMUST00000106536.8	1839	15	21	0	21	0	multi-exon	FALSE	canonical	3	86	junction_8	14.9497457489813	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	NA	False	NA	NA	NA	113423777	113399112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
tx.13155	chr3	-	2910	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	134	2	134	-2	multi-exon	FALSE	canonical	3	24	junction_1	0	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTTTTGTGAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	115508587	115504083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_115506764_115508357
tx.13156	chr3	-	581	2	FSM	ENSMUSG00000054426.12	ENSMUST00000185424.2	433	2	-143	-5	-1	3	multi-exon	FALSE	canonical	3	36	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTATGGTGATT	943	False	NA	NA	False	NA	NA	NA	115681744	115675226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_115675488_115681424
tx.13157	chr3	+	1352	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	-18	242	0	2	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTATAATCTCCTT	7740	False	NA	NA	False	NA	NA	NA	115681813	115722739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
tx.13158	chr3	-	2031	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	19	6970	19	-6970	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTGTAGCCTATTTT	127	False	NA	NA	False	NA	NA	NA	115801036	115739591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
tx.13159	chr3	+	2975	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	16	9	0	-9	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGAGCGGGTGCTCT	10	False	NA	NA	False	NA	NA	NA	115801126	115822657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
tx.1316	chr10	+	4379	10	FSM	ENSMUSG00000039891.7	ENSMUST00000037964.7	4422	10	41	2	41	-2	multi-exon	FALSE	canonical	1	5	junction_4	2.43938871112224	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCTAGTAGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	17672044	17721411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_17672170_17674835_17675282_17682512_17682605_17690976_17691148_17703539_17703735_17705983_17706104_17709025_17709101_17714655_17714749_17717173_17717270_17718445
tx.13160	chr3	+	2856	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	36	-52	36	-5	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCGGGTGCTCTGGTG	88	False	NA	NA	False	NA	NA	NA	115801904	115822661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
tx.13161	chr3	-	4478	16	FSM	ENSMUSG00000033502.16	ENSMUST00000090464.7	4485	16	7	0	7	0	multi-exon	FALSE	canonical	2	9	junction_7	3.61232458243842	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGGCATTCATTAGTT	NA	False	NA	NA	False	NA	NA	NA	116217674	116066201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_116068358_116087374_116087736_116088399_116088523_116090779_116090828_116092085_116092199_116101788_116101949_116115730_116115870_116122127_116122359_116126443_116126532_116142102_116142166_116144854_116144922_116160275_116160356_116186470_116186564_116198191_116198268_116216215_116216307_116217085
tx.13162	chr3	-	1485	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	109	0	-34	0	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	173	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCTGCTGCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	116301748	116282611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
tx.13163	chr3	+	3257	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	42	2	-7	-2	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTATGCCTTCATAG	NA	False	NA	NA	False	NA	NA	NA	116306760	116343628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
tx.13164	chr3	+	3104	9	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	69.7387983836831	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTATGCCTTCATAGT	NA	False	NA	NA	False	NA	NA	NA	116306714	116343629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_116306841_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
tx.13165	chr3	-	1596	2	ISM	ENSMUSG00000033439.13	ENSMUST00000199439.2	865	3	-96	-242	-96	0	intron_retention	FALSE	canonical	3	136	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	NA	NA	NA	116377221	116374742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_116375260_116376142
tx.13166	chr3	-	2274	10	NIC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	100	junction_2	10.7577132821863	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCTGAGTGTGAGGCTT	NA	False	NA	NA	False	NA	NA	NA	116388517	116374741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383942_116385841_116385909_116386112_116386160_116388287
tx.13167	chr3	-	1850	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19717	0	-10	0	3prime_fragment	FALSE	canonical	3	87	junction_7	13.8524366087703	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCTGAGTGTGAGGCTT	NA	False	NA	NA	False	NA	NA	NA	116388519	116374741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
tx.13168	chr3	+	3341	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	20	-1467	-1	1467	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTCTCCGCATTGTT	NA	False	NA	NA	False	NA	NA	NA	116388650	116416718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
tx.13169	chr3	+	4199	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	-7	-1788	-2	-69	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGAAGCATGTTTAGGA	NA	False	NA	NA	False	NA	NA	NA	116388649	116424584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
tx.1317	chr10	-	5107	4	FSM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	-16	7	-16	0	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAACTTTGCATTTTAG	NA	False	NA	NA	False	NA	NA	NA	17823831	17774789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_17778126_17783781_17783937_17790739_17791781_17823256
tx.13170	chr3	-	2720	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	62	0	-5	0	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	1004	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	NA	False	NA	NA	NA	116456264	116424812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
tx.13171	chr3	-	5087	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	401	237	8	-237	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	231	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCATTTTCTATTTTT	2197	False	NA	NA	False	NA	NA	NA	116505898	116463355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
tx.13172	chr3	-	5140	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-76	4561	-76	-1509	multi-exon	TRUE	canonical	3	13	junction_28	10.2172903022423	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATCTCTTTTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	116601891	116538208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
tx.13173	chr3	+	2393	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	1891	24	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	74.6183176795975	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116655106	116697151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
tx.13174	chr3	+	2271	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2102	24	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	253	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116655317	116697151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
tx.13175	chr3	+	2232	16	ISM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	6723	-24	6620	24	3prime_fragment	FALSE	canonical	3	287	junction_10	27.0313398360742	67	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116659835	116697151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
tx.13176	chr3	-	2086	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	-71	6	-71	-6	multi-exon	FALSE	canonical	3	21	junction_1	4.05431868505671	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCAAAGTAGGTTTAAG	NA	False	NA	NA	False	NA	NA	NA	117662656	117575301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
tx.13177	chr3	-	1662	8	FSM	ENSMUSG00000028007.14	ENSMUST00000169812.8	1588	8	-78	4	-22	-4	multi-exon	FALSE	canonical	3	11	junction_1	6.9045976991969	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTCTATGATGTGTTC	NA	False	NA	NA	False	NA	NA	NA	117662607	117575523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_117576026_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
tx.13178	chr3	-	3254	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	271	252	-145	-252	multi-exon	TRUE	canonical	3	41	junction_1	15.6821233920295	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	NA	NA	NA	119577182	119512642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
tx.13179	chr3	-	3235	14	FSM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	-123	252	-123	-252	multi-exon	TRUE	canonical	3	41	junction_1	15.6821233920295	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	NA	NA	NA	119577160	119512642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
tx.1318	chr10	-	4505	2	ISM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	31	13021	31	-9770	5prime_fragment	FALSE	canonical	3	53	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGGAAGTATGATTAAAT	NA	False	NA	NA	False	NA	NA	NA	17823784	17787803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_17791781_17823256
tx.13180	chr3	-	3342	14	NIC	ENSMUSG00000028134.12	novel	3364	14	NA	NA	88	-252	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	23.8597975856545	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	NA	NA	NA	119577252	119512642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
tx.13181	chr3	-	3336	13	NIC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	42	-252	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	23.7888571020598	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	NA	NA	NA	119577298	119512642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
tx.13182	chr3	-	1478	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	0	6	0	-4	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTCTTGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	120965344	120949052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
tx.13183	chr3	+	2070	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	-36	3	-36	-3	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATGCCAGGTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	121085385	121156740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
tx.13184	chr3	+	2038	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	4	7	4	1	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	5662	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACCACAGGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	121220149	121251849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
tx.13185	chr3	-	2492	15	FSM	ENSMUSG00000039865.9	ENSMUST00000039197.9	2620	15	128	0	128	0	multi-exon	FALSE	canonical	2	7	junction_10	3.70672307009404	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTTGTTCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	121325925	121253176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_121253726_121254750_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
tx.13186	chr3	+	1890	6	FSM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	-23	5	-23	-5	multi-exon	FALSE	canonical	3	41	junction_2	13.6176356244394	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATCGCATTTATATCTT	NA	False	NA	NA	False	NA	NA	NA	121517162	121528692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029_121526190_121527754
tx.13187	chr3	-	3380	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	107	2	2	-2	multi-exon	TRUE	canonical	3	145	junction_14	20.5277981251709	333	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACATGTGCCTGACCTT	7238	False	NA	NA	False	NA	NA	NA	121608844	121552557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
tx.13188	chr3	+	5198	23	FSM	ENSMUSG00000039831.17	ENSMUST00000037958.14	5787	23	-7	596	-7	3	multi-exon	TRUE	canonical	2	6	junction_1	3.88922010920586	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGTTCTTATGGCTTA	NA	False	NA	NA	False	NA	NA	NA	121746870	121809806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_121747054_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
tx.13189	chr3	+	5197	23	NIC	ENSMUSG00000039831.17	novel	2503	20	NA	NA	-55	1	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	3.57707346100895	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAGGTTCTTATGGCT	NA	False	NA	NA	False	NA	NA	NA	121761422	121809804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_121761607_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
tx.1319	chr10	-	755	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	88	3	18	1	multi-exon	FALSE	canonical	3	143	junction_1	12	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCTGGTGGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	17898948	17887010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_17887565_17894586_17894654_17898814
tx.13190	chr3	+	4377	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	36	1176	36	-1176	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	575	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGCAATTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	122039241	122063205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
tx.13191	chr3	+	2418	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	9	2	9	-2	multi-exon	FALSE	canonical	3	1082	junction_6	112.264073604258	1572	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGTGCCTCTTGGAAT	NA	False	NA	NA	False	NA	NA	NA	122068045	122078918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
tx.13192	chr3	+	3333	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	-26	4	-5	-4	multi-exon	TRUE	canonical	3	116	junction_1	21.0877740616698	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCCTGTCTCTTTATTA	NA	False	NA	NA	False	NA	NA	NA	122213400	122323836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
tx.13193	chr3	+	2505	8	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	88261	8	-25	-8	3prime_fragment	FALSE	canonical	3	148	junction_2	11.5475945016921	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTATCCTGTCTCTTT	7532	False	NA	NA	False	NA	NA	NA	122301687	122323832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
tx.13194	chr3	-	4013	15	NIC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	12.9545910229319	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGTACTTATCTTTT	NA	False	NA	NA	False	NA	NA	NA	122413375	122332369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
tx.13195	chr3	-	5200	14	FSM	ENSMUSG00000039735.17	ENSMUST00000162409.8	5198	14	-1	-1	-1	1	multi-exon	FALSE	canonical	3	68	junction_7	9.36820759854666	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGTGTACTTATCT	NA	False	NA	NA	False	NA	NA	NA	122413365	122332372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
tx.13196	chr3	+	6895	21	FSM	ENSMUSG00000053965.11	ENSMUST00000066728.10	6939	21	42	2	42	0	multi-exon	FALSE	canonical	1	1	junction_8	2.13541565040626	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTGGTGTGATCAT	NA	False	NA	NA	False	NA	NA	NA	122522637	122653021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_122523017_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693_122636758_122645298_122645374_122646186_122646271_122648843
tx.13197	chr3	+	530	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	182	448	182	-448	multi-exon	FALSE	canonical	3	1657	junction_1	0	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTATCTTT	NA	False	NA	NA	False	NA	NA	NA	122718033	122719385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_122718306_122719127
tx.13198	chr3	-	3495	4	ISM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	34854	315	-29	-315	3prime_fragment	FALSE	canonical	3	39	junction_2	8.83176086632785	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTATAGCTGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	122743305	122725456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772
tx.13199	chr3	-	5817	16	FSM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	58	310	19	-310	multi-exon	FALSE	canonical	3	36	junction_5	6.61177400971597	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGCTGGTCTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	122778101	122725451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
tx.1320	chr10	+	2923	19	FSM	ENSMUSG00000019854.18	ENSMUST00000164556.8	2537	19	-398	12	-319	-1	multi-exon	FALSE	canonical	3	82	junction_9	47.5026964796685	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATTGTATTTGTTG	NA	False	NA	NA	False	NA	NA	NA	17931289	18000891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
tx.13200	chr3	+	3903	23	FSM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	11.2449253935915	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	NA	False	NA	NA	NA	123061103	123159290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
tx.13201	chr3	+	4779	11	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	-19	25816	-19	3053	5prime_fragment	TRUE	canonical	3	54	junction_9	9.62340895940726	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTGTTTATTGCACAC	NA	False	NA	NA	False	NA	NA	NA	123061084	123133474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134
tx.13202	chr3	+	4052	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.672942719547	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	NA	False	NA	NA	NA	123061102	123159290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_123061186_123061838_123061987_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
tx.13203	chr3	-	2602	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	139	0	16	0	multi-exon	TRUE	canonical	3	213	junction_2	25.8534330408942	321	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTGTTTTCCTTAGA	NA	False	NA	NA	False	NA	NA	NA	123179618	123161945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
tx.13204	chr3	-	377	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	68	3	-3	0	multi-exon	FALSE	canonical	3	427	junction_1	15.5	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGACTGTGTCCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	123301985	123301203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_123301310_123301465_123301512_123301760
tx.13205	chr3	-	3734	6	FSM	ENSMUSG00000032854.13	ENSMUST00000057944.12	3740	6	-45	51	-45	-51	multi-exon	FALSE	canonical	3	9	junction_2	3.44093010681705	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAACACGGATCTTTAAG	NA	False	NA	NA	False	NA	NA	NA	125732313	125658970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708286_125709111_125732101
tx.13206	chr3	+	4162	19	FSM	ENSMUSG00000053819.17	ENSMUST00000199300.5	5524	19	-52	1414	4	1	multi-exon	TRUE	canonical	2	3	junction_9	3.34119443416775	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTCCATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	126390603	126638561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
tx.13207	chr3	+	4055	18	FSM	ENSMUSG00000053819.17	ENSMUST00000106400.9	2722	18	-124	-1209	13	1	multi-exon	FALSE	canonical	1	3	junction_9	3.31714639526393	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTCCATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	126390621	126638561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126636406
tx.13208	chr3	-	7904	43	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	19998	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_34	7.16603382746178	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGCAGTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	126898513	126715262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409
tx.13209	chr3	-	8217	46	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_43	8.03553834806417	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCAGTGGTGGTTTTG	2197	False	NA	NA	False	NA	NA	NA	127202646	126715260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127041782_127041882_127132780_127132842_127202493
tx.1321	chr10	+	2993	20	FSM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	-387	-11	-308	-1	multi-exon	FALSE	canonical	3	129	junction_9	41.6677266716506	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATTGTATTTGTTG	NA	False	NA	NA	False	NA	NA	NA	17931300	18000891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
tx.13210	chr3	-	270	2	FSM	ENSMUSG00000032826.20	ENSMUST00000183234.3	4550	2	-58	4338	6	-2738	multi-exon	FALSE	canonical	3	26	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTTGGTATTTTAATG	2141	False	NA	NA	False	NA	NA	NA	127202702	127132780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_127132842_127202493
tx.13211	chr3	-	2092	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	29	0	27	0	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	750	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	NA	False	NA	NA	NA	127346969	127330362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
tx.13212	chr3	+	7546	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-31	0	at_least_one_novel_splicesite	TRUE	canonical	1	10	junction_6	22.5920339943087	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAATTCTTATGTGGAA	NA	False	NA	NA	False	NA	NA	NA	127347106	127411665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
tx.13213	chr3	+	3966	6	FSM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-163	1	-19	-1	multi-exon	FALSE	canonical	3	40	junction_5	13.6	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTATGTATGTGCA	NA	False	NA	NA	False	NA	NA	NA	127347118	127358486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
tx.13214	chr3	-	2613	9	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_6	132.051067299738	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTGCATCATGGCTT	NA	False	NA	NA	False	NA	NA	NA	127631137	127600660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127616232_127616260_127616913_127616963_127630797
tx.13215	chr3	-	2643	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	20	-1	20	1	multi-exon	FALSE	canonical	3	416	junction_8	26.3288791357173	806	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGCATCATGGCTTC	NA	False	NA	NA	False	NA	NA	NA	127631140	127600659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
tx.13216	chr3	-	1600	2	FSM	ENSMUSG00000050549.9	ENSMUST00000199273.2	2234	2	-2	636	-2	-14	multi-exon	FALSE	canonical	3	68	junction_1	0	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAAATGACTTTGA	2572	False	NA	NA	False	NA	NA	NA	127689975	127663342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_127664650_127689682
tx.13217	chr3	+	5950	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	1	0	1	0	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	364	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	129326035	129432144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
tx.13218	chr3	+	6021	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	113	-3524	82	0	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	129326116	129432144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
tx.13219	chr3	-	1027	7	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-196	-2	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_6	620.417444593199	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTATTGAACGGAACC	NA	False	NA	NA	False	NA	NA	NA	129624777	129618562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624740
tx.1322	chr10	-	3288	6	NIC	ENSMUSG00000059554.13	novel	1190	6	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	20.4782811778723	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTTTTCTGTTTAGA	NA	False	NA	NA	False	NA	NA	NA	18110733	18089424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_18089927_18092007_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
tx.13220	chr3	-	1193	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	76	2	40	-2	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	459	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTATTGAACGGAACC	NA	False	NA	NA	False	NA	NA	NA	129624969	129618562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
tx.13221	chr3	-	990	6	ISM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	542	3	78	1	3prime_fragment	FALSE	canonical	3	1505	junction_2	175.642136174666	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGTTTATTGAACGGAAC	NA	False	NA	NA	False	NA	NA	NA	129624503	129618563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243
tx.13222	chr3	+	1539	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	13	9	13	-5	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATCTCCTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	129672267	129689465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
tx.13223	chr3	+	1289	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	18	149	-15	-149	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCTAATTCCTATGTT	NA	False	NA	NA	False	NA	NA	NA	129695091	129707603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
tx.13224	chr3	-	4976	23	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	41	-6	combination_of_known_junctions	FALSE	canonical	3	42	junction_20	30.141162376748	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATTGTGGAGTGCAAT	NA	False	NA	NA	False	NA	NA	NA	129854515	129776413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322_129835097_129854217
tx.13225	chr3	-	5083	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	37	8	37	-8	multi-exon	FALSE	canonical	3	129	junction_20	16.4228159792433	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGCATTGTGGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	129854519	129776415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
tx.13226	chr3	-	1046	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	14	7	-14	0	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	752	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGAGTGTGGACTTT	NA	False	NA	NA	False	NA	NA	NA	130503079	130489567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
tx.13227	chr3	-	1443	4	ISM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	-4	3	1	0	intron_retention	FALSE	canonical	3	7006	junction_1	1068.10122283528	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTCCGTTATCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	130523990	130520482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877
tx.13228	chr3	-	608	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	13	3	-3	0	multi-exon	FALSE	canonical	3	513	junction_4	3512.03875085398	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTCCGTTATCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	130523973	130520482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
tx.13229	chr3	-	444	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	41	-5	-10	0	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTCCGTTATCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	130524006	130520482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
tx.1323	chr10	-	2468	7	NNC	ENSMUSG00000059554.13	novel	1190	6	NA	NA	-216	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	27.7968823191858	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTCTGTTTAGAA	NA	False	NA	NA	False	NA	NA	NA	18110962	18089423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_18089927_18092007_18092031_18093080_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
tx.13230	chr3	+	3583	11	FSM	ENSMUSG00000027985.15	ENSMUST00000066849.13	3398	11	-189	4	-189	-4	multi-exon	FALSE	canonical	3	14	junction_9	10.581115253129	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAGTTGGTGGTGAACTG	NA	False	NA	NA	False	NA	NA	NA	130903930	131018001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
tx.13231	chr3	+	3511	10	FSM	ENSMUSG00000027985.15	ENSMUST00000106341.9	3357	10	-157	3	-157	-3	multi-exon	FALSE	canonical	3	22	junction_9	8.71779788708135	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTTGGTGGTGAACTGA	NA	False	NA	NA	False	NA	NA	NA	130903962	131018002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_131016724
tx.13232	chr3	-	1730	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	36	23	36	-23	multi-exon	FALSE	canonical	3	722	junction_3	33.5492327841959	783	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATCCTTAAGTAATTAT	NA	False	NA	NA	False	NA	NA	NA	131065714	131027090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
tx.13233	chr3	-	4354	5	FSM	ENSMUSG00000027983.14	ENSMUST00000106337.7	4378	5	24	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.866025403784439	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTGTCAGCTCGTTTGT	NA	False	NA	NA	False	NA	NA	NA	131096849	131082089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_131084957_131087165_131087334_131089036_131089199_131091434_131092071_131096328
tx.13234	chr3	-	1710	4	FSM	ENSMUSG00000027983.14	ENSMUST00000200236.2	1716	4	24	-18	24	18	multi-exon	FALSE	canonical	2	4	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTTGGTGTCTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	131096825	131086918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_131087334_131089036_131089199_131091434_131092071_131096328
tx.13235	chr3	-	4544	2	NIC	ENSMUSG00000027983.14	novel	1873	5	NA	NA	-8	17	intron_retention	FALSE	canonical	2	4	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATGTCCTGGAACTC	NA	False	NA	NA	False	NA	NA	NA	131096857	131088055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_131092071_131096328
tx.13236	chr3	-	5633	6	NNC	ENSMUSG00000050931.8	novel	5801	6	NA	NA	209	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	2.31516738055805	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATATATGAATTTCGGC	NA	False	NA	NA	False	NA	NA	NA	131196031	131112638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_131116960_131118587_131118755_131123971_131124126_131129813_131129932_131135417_131136110_131195850
tx.13237	chr3	+	2694	13	FSM	ENSMUSG00000028032.14	ENSMUST00000199878.5	2648	13	-45	-1	-14	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8531484588242	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	False	NA	NA	False	NA	NA	NA	131270611	131349432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_131270745_131273262_131273440_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
tx.13238	chr3	+	2516	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	84	0	-13	0	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	False	NA	NA	False	NA	NA	NA	131270612	131349432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
tx.13239	chr3	-	1089	7	FSM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	35	2	-12	-2	multi-exon	FALSE	canonical	3	854	junction_6	52.4195150259477	495	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTTGCTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	132389610	132366261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
tx.1324	chr10	-	1168	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	21	1	3	-1	multi-exon	FALSE	canonical	3	48	junction_2	8.9977775033616	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTTTTCTGTTTAGA	NA	False	NA	NA	False	NA	NA	NA	18110723	18089424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
tx.13240	chr3	+	2943	3	FSM	ENSMUSG00000028030.13	ENSMUST00000198147.5	5195	3	-27	2279	-3	-2279	multi-exon	FALSE	canonical	1	21	junction_1	47	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAAAATACCTGCCCT	NA	False	NA	NA	False	NA	NA	NA	132389901	132402611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_132390156_132392532_132392754_132400143
tx.13241	chr3	+	6507	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	-4	75	-4	-75	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTGTGGTGTATAGGA	NA	False	NA	NA	False	NA	NA	NA	132389900	132547374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
tx.13242	chr3	-	4636	12	FSM	ENSMUSG00000040998.19	ENSMUST00000042744.16	4619	12	-18	1	-18	-1	multi-exon	FALSE	canonical	1	4	junction_10	2.17802700922017	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTCTTCCTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	132656070	132587506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653909_132655733
tx.13243	chr3	-	4570	13	FSM	ENSMUSG00000040998.19	ENSMUST00000042729.16	3601	13	-33	-936	-33	-2	multi-exon	FALSE	canonical	2	2	junction_10	2.98491578142872	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCCTCTTCCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	132655954	132587507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132637342_132637394_132653807_132653909_132655733
tx.13244	chr3	-	3493	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	5	5	5	-5	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	308	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCCTTTGACTCCTCT	NA	False	NA	NA	False	NA	NA	NA	132797581	132687517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
tx.13245	chr3	-	4115	9	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	5	-2351	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	62.8190606026547	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGTCATTATTAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	132797581	132706942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_132709263_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
tx.13246	chr3	-	4268	8	ISM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	14	19430	14	-2351	5prime_fragment	FALSE	canonical	3	172	junction_4	17.628826115317	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGTCATTATTAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	132797572	132706942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
tx.13247	chr3	+	3011	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	83	7	-15	-7	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATGTGCCTGTAGAT	NA	False	NA	NA	False	NA	NA	NA	132797683	132816742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
tx.13248	chr3	+	2961	6	ISM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	4906	5	-3641	-5	3prime_fragment	FALSE	canonical	3	157	junction_4	11.0815161417561	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGCCTGTAGATGT	NA	False	NA	NA	False	NA	NA	NA	132802506	132816744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
tx.13249	chr3	+	1215	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	2	9	2	2	multi-exon	TRUE	canonical	3	471	junction_4	36.8801946894343	285	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAACTTCTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	133015872	133083830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
tx.1325	chr10	-	2118	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	0	137	0	-137	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATGGCATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	18110726	18092668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
tx.13250	chr3	-	6208	5	ISM	ENSMUSG00000040943.13	ENSMUST00000098603.8	9179	11	66802	0	-1018	0	3prime_fragment	FALSE	canonical	3	156	junction_3	23.0108669980077	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTCTGTTGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	133183349	133169439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245
tx.13251	chr3	-	8148	10	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-7319	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	31.2516666222246	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTCTGTTGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	133193762	133169439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272
tx.13252	chr3	-	9129	12	FSM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	52	-160	-14	0	multi-exon	FALSE	canonical	3	63	junction_5	40.7374175676692	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTCTGTTGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	133250077	133169439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
tx.13253	chr3	-	9128	12	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	35.1295124450667	48	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTATTCTGTTGCAGAG	NA	False	NA	NA	False	NA	NA	NA	133250081	133169441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
tx.13254	chr3	-	7050	10	ISM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	57470	-162	-6216	2	3prime_fragment	FALSE	canonical	3	63	junction_5	39.5699100046712	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTGTTGCAGAGGTTT	NA	False	NA	NA	False	NA	NA	NA	133192659	133169437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272
tx.13255	chr3	+	7790	46	FSM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	43	77	43	-77	multi-exon	FALSE	canonical	0	0	junction_28	46.2867818371455	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGATGGGTATAACATGT	NA	False	NA	NA	False	NA	NA	NA	134918340	134979295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
tx.13256	chr3	+	7613	45	NIC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	73	-68	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	54.6817048287195	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAACATGTATACATTTC	NA	False	NA	NA	False	NA	NA	NA	134918370	134979304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
tx.13257	chr3	+	1098	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	74	0	12	0	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTTTTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	134987055	135010187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
tx.13258	chr3	+	3364	3	ISM	ENSMUSG00000050150.17	ENSMUST00000159658.8	588	4	-19	11333	-19	2340	5prime_fragment	FALSE	canonical	3	17	junction_1	66	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGCCAGATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	135053770	135066407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_135053884_135060771_135060833_135063217
tx.13259	chr3	+	1463	4	NIC	ENSMUSG00000050150.17	novel	1407	4	NA	NA	-10	4	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	42.1030481873542	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTATTCATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	135053779	135064071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217
tx.1326	chr10	+	7235	7	FSM	ENSMUSG00000039835.17	ENSMUST00000207038.2	4854	7	-471	-1910	-471	-6	multi-exon	FALSE	canonical	2	10	junction_1	9.68532681717842	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAACTTCTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	18194261	18409631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_18195025_18348666_18348820_18373780_18373906_18387297_18387491_18399538_18402791_18403283_18403417_18407015
tx.13260	chr3	+	1432	7	ISM	ENSMUSG00000050150.17	ENSMUST00000160460.8	2072	11	-44	18607	-15	51	5prime_fragment	FALSE	canonical	3	60	junction_5	29.9146935282461	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTATAGCCAGGTTCT	NA	False	NA	NA	False	NA	NA	NA	135053774	135080237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
tx.13261	chr3	-	2851	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	506	4	-12	-4	multi-exon	FALSE	canonical	3	215	junction_1	1	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGATGTTTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135129180	135112176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_135114652_135116771_135116987_135129019
tx.13262	chr3	+	3628	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	17	-2133	17	-7	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	395	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTTTGGTCTTACT	NA	False	NA	NA	False	NA	NA	NA	135144011	135173952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.13263	chr3	+	2068	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	59	-1389	59	0	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	NA	False	NA	NA	NA	135144135	135172436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.13264	chr3	+	2448	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	54	2	1	-2	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	540	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATATGTAATTTGGAC	NA	False	NA	NA	False	NA	NA	NA	135144294	135172709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.13265	chr3	+	2650	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	165	1018	-17	230	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	657	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCCCACAAGGGTAAGA	NA	False	NA	NA	False	NA	NA	NA	135144490	135172941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.13266	chr3	+	4064	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-31	-1518	-31	-7	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTTTGGTCTTACT	NA	False	NA	NA	False	NA	NA	NA	135144866	135173952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.13267	chr3	+	3664	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	3	8	3	-8	multi-exon	TRUE	canonical	3	85	junction_8	25.1755554804656	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAAAGCTGCATTGAAC	NA	False	NA	NA	False	NA	NA	NA	135191374	135277157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
tx.13268	chr3	-	169	2	Antisense	novelGene_ENSMUSG00000028164.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAGATATTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	135234442	135232663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr3_-_135232813_135234422
tx.13269	chr3	-	1759	7	ISM	ENSMUSG00000028163.18	ENSMUST00000129428.8	2520	13	14023	-227	-19	0	3prime_fragment	FALSE	canonical	3	48	junction_1	5.39804491356722	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTGATCTCTGCAAA	NA	False	NA	NA	False	NA	NA	NA	135300221	135290415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969
tx.1327	chr10	+	7367	8	NIC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	-471	-6	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	8.8456146173787	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAACTTCTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	18194261	18409631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_18195025_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
tx.13270	chr3	-	4127	25	FSM	ENSMUSG00000028163.18	ENSMUST00000029812.14	4117	25	-12	2	-11	0	multi-exon	FALSE	canonical	3	24	junction_17	10.9790678363673	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTGATCTCTGCA	NA	False	NA	NA	False	NA	NA	NA	135397319	135290417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
tx.13271	chr3	+	4442	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-27	343	-27	-343	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	447	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTAATGAGAGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	136375857	136643145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
tx.13272	chr3	+	5120	2	FSM	ENSMUSG00000046818.8_ENSMUSG00002076808.1	ENSMUST00000165845.2	446	2	-2515	-2159	48	0	multi-exon	FALSE	canonical	3	67	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTGGCCTCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	137327282	137334094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_137330035_137331726
tx.13273	chr3	+	2657	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	65	0	65	0	multi-exon	FALSE	canonical	3	67	junction_2	6.5	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTGGCCTCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	137329497	137334094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_137329645_137329892_137330035_137331726
tx.13274	chr3	+	183	2	Antisense	novelGene_ENSMUSG00000106629.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTCTCTTTAAAATATC	NA	False	NA	NA	False	NA	NA	NA	137547694	137596550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr3_+_137547842_137596514
tx.13275	chr3	+	966	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	100	3	-4	-3	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	1857	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCGTGGTACTTTTGT	NA	False	NA	NA	False	NA	NA	NA	137570347	137572680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
tx.13276	chr3	+	6403	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	99	2975	99	-2975	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAGCTACATGGAGTT	NA	False	NA	NA	False	NA	NA	NA	137573534	137619343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
tx.13277	chr3	+	1313	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	-19	1	1	-1	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	212	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGCTCTGTATAGGCC	61	False	NA	NA	False	NA	NA	NA	137624267	137634525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
tx.13278	chr3	-	3052	9	FSM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	20	11	5	-10	multi-exon	FALSE	canonical	3	16	junction_1	5.49431524395898	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGGTACATGTCCAA	NA	False	NA	NA	False	NA	NA	NA	137687286	137636778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
tx.13279	chr3	-	4059	20	NNC	ENSMUSG00000028158.15	novel	3072	20	NA	NA	-2	-219	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	5.25999905206273	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTAAAAGGCCACACCA	NA	False	NA	NA	False	NA	NA	NA	137849151	137795833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810546_137810699_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818_137831007_137839760_137839900_137844662_137844758_137848932
tx.1328	chr10	+	5575	3	ISM	ENSMUSG00000039835.17	ENSMUST00000100054.4	6795	8	54236	6	54236	-6	3prime_fragment	FALSE	canonical	3	19	junction_1	6	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAACTTCTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	18399964	18409631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_18402791_18403283_18403417_18407015
tx.13280	chr3	+	2452	8	NNC	ENSMUSG00000004127.13	novel	4025	8	NA	NA	3	-1541	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2811814618978	45	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	NA	False	NA	NA	NA	137849232	137864038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_137849353_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
tx.13281	chr3	+	5849	7	ISM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	339	1543	-5	-1543	3prime_fragment	FALSE	canonical	3	147	junction_6	16.8267313786394	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCTAAAATTCAGGT	NA	False	NA	NA	False	NA	NA	NA	137849616	137864036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
tx.13282	chr3	+	4870	8	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-5	-1541	intron_retention	FALSE	canonical	3	7	junction_1	62.9051764522587	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	NA	False	NA	NA	NA	137849616	137864038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
tx.13283	chr3	+	4109	9	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	78.3194579909744	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTGTCAGCTAATGTT	NA	False	NA	NA	False	NA	NA	NA	137849627	137865579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_137849757_137852047_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
tx.13284	chr3	+	1363	9	FSM	ENSMUSG00000074207.11	ENSMUST00000004232.10	1492	9	123	6	-28	-6	multi-exon	FALSE	canonical	3	10	junction_3	3.01817411691241	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACTGAGTTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	137983377	137996453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_137983498_137985491_137985594_137986134_137986274_137988196_137988285_137988375_137988596_137992452_137992714_137994509_137994646_137995562_137995702_137996295
tx.13285	chr3	+	1401	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	20	183	1	73	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	1219	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4944	False	NA	NA	False	NA	NA	NA	138148873	138161077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
tx.13286	chr3	-	2613	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	77	-4	-40	4	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	590	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTCTAGTTGTATTTG	NA	False	NA	NA	False	NA	NA	NA	138195199	138164712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
tx.13287	chr3	+	2077	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	852	-1508	-8	693	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	1322	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTATATTGGTCAATTGT	NA	False	NA	NA	False	NA	NA	NA	138233037	138262668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
tx.13288	chr3	+	1763	6	ISM	ENSMUSG00000028156.13	ENSMUST00000196990.5	856	8	19035	-1072	-4535	416	3prime_fragment	FALSE	canonical	3	1684	junction_2	178.575474239885	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTACACTGATGTGGCT	NA	False	NA	NA	False	NA	NA	NA	138252080	138262391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
tx.13289	chr3	+	3064	8	FSM	ENSMUSG00000028152.11	ENSMUST00000142890.8	3000	8	-64	0	46	0	multi-exon	FALSE	canonical	3	60	junction_4	43.0926860596637	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	4871	False	NA	NA	False	NA	NA	NA	138448001	138610187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
tx.1329	chr10	-	1117	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	154	1264	-35	-4	multi-exon	FALSE	canonical	3	26	junction_2	0.471404520791032	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTTTCCTTGCCTCCGC	NA	False	NA	NA	False	NA	NA	NA	18421670	18416509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
tx.13290	chr3	+	3130	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	44	3479	44	0	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	4869	False	NA	NA	False	NA	NA	NA	138447999	138610187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
tx.13291	chr3	-	3542	14	FSM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	-154	-5	-23	1	multi-exon	FALSE	canonical	3	34	junction_10	15.970386796752	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	138780985	138631665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
tx.13292	chr3	-	3693	15	FSM	ENSMUSG00000028149.13	ENSMUST00000098574.9	3669	15	-27	3	-27	1	multi-exon	FALSE	canonical	3	58	junction_10	10.7892614791424	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	138780989	138631665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
tx.13293	chr3	-	4665	13	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	26	2	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	45.7355775688419	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCTGGCCTTTTTTTT	7029	False	NA	NA	False	NA	NA	NA	142101428	141945348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142017976_142020166_142020210_142058494_142058647_142097473_142097612_142101346
tx.13294	chr3	-	4998	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	20	-2	20	2	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	265	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCTGGCCTTTTTTTT	7023	False	NA	NA	False	NA	NA	NA	142101434	141945348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
tx.13295	chr3	+	5575	11	FSM	ENSMUSG00000105338.2_ENSMUSG00000040253.16	ENSMUST00000171263.8	2497	11	18	-3096	18	-3	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATATGGTGTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	142236120	142255907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_142236201_142240277_142240474_142242057_142242186_142243772_142243883_142244482_142244680_142247116_142247363_142248609_142248891_142249682_142249896_142251210_142251314_142251622_142251817_142252080
tx.13296	chr3	+	1886	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	-3	5	-3	-5	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACACATACCTCATCTG	NA	False	NA	NA	False	NA	NA	NA	142406808	142450283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
tx.13297	chr3	+	1275	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	180	0	2	0	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	False	NA	NA	False	NA	NA	NA	142470985	142489367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
tx.13298	chr3	-	5577	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	14	616	0	-616	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	832	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGTTTTAAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	142587751	142497278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
tx.13299	chr3	-	4597	18	ISM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	52701	616	-8	-616	3prime_fragment	FALSE	canonical	3	374	junction_13	36.9752559176135	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGTTTTAAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	142535064	142497278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944
tx.1330	chr10	-	2910	2	ISM	ENSMUSG00000019852.8	ENSMUST00000215836.2	14579	34	151697	6147	151501	1417	3prime_fragment	FALSE	canonical	3	10	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCCATTATTCAGCACAT	NA	False	NA	NA	False	NA	NA	NA	18468000	18463733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_18465521_18466877
tx.13300	chr3	-	5279	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-445	-621	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_21	101.001807307419	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAATTTTGGTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	142588210	142497283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142588123
tx.13301	chr3	-	3343	7	NIC	ENSMUSG00000004591.17	novel	2510	16	NA	NA	-1	1618	intron_retention	FALSE	canonical	3	467	junction_2	29.0975371237269	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGAGATCAATGTTAT	NA	False	NA	NA	False	NA	NA	NA	142587766	142525451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
tx.13302	chr3	-	1959	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	-299	9	-299	-9	multi-exon	FALSE	canonical	3	21	junction_4	8.32165848854662	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACAGAGTTTGGGTTTA	NA	False	NA	NA	False	NA	NA	NA	143911280	143894299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
tx.13303	chr3	-	2938	7	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-31	-3273	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	40.4831926716371	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCTTCTCAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	144275973	144138739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_144140479_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
tx.13304	chr3	-	4803	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-35	1409	-35	-1409	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATCTAAAAGTACTAGA	NA	False	NA	NA	False	NA	NA	NA	144275977	144136875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
tx.13305	chr3	+	1235	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	276	3	9	-3	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	401	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTCTGCTTTGTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	144276462	144303438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
tx.13306	chr3	-	1751	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-11	2221	-11	281	multi-exon	TRUE	canonical	3	282	junction_5	25.8444868395563	340	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGACTCATTTATTAGA	NA	False	NA	NA	False	NA	NA	NA	144426107	144396825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
tx.13307	chr3	-	1819	5	ISM	ENSMUSG00000037033.10	ENSMUST00000159989.2	3361	14	21220	-5	21220	5	3prime_fragment	FALSE	canonical	3	22	junction_4	3.53553390593274	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCCTTAATCTACCTT	NA	False	NA	NA	False	NA	NA	NA	144533898	144528378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672
tx.13308	chr3	-	2829	6	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	19944	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	5.74804314527997	15	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTATTTCCTTAATCT	NA	False	NA	NA	False	NA	NA	NA	144535174	144528383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672_144533898_144534158
tx.13309	chr3	+	2429	16	NNC	ENSMUSG00000028256.17	novel	2425	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	18.7538440503985	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAGTATAAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	144824327	144859654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
tx.1331	chr10	+	1989	3	FSM	ENSMUSG00000019851.9	ENSMUST00000019998.9	1952	3	-37	0	-37	0	multi-exon	FALSE	canonical	3	42	junction_2	1	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTGCTTTGTAGT	NA	False	NA	NA	False	NA	NA	NA	18720730	18732821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_18721155_18729284_18729426_18731397
tx.13310	chr3	+	2289	15	FSM	ENSMUSG00000028256.17	ENSMUST00000029920.15	2239	15	-50	0	-18	0	multi-exon	FALSE	canonical	3	28	junction_1	27.9021614260419	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAACAGTATAAGTT	NA	False	NA	NA	False	NA	NA	NA	144824330	144859650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
tx.13311	chr3	+	2422	16	FSM	ENSMUSG00000028256.17	ENSMUST00000106192.9	2425	16	-19	22	-18	0	multi-exon	FALSE	canonical	3	28	junction_1	23.1944437791084	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAGTATAAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	144824330	144859654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
tx.13312	chr3	+	2304	15	NNC	ENSMUSG00000028256.17	novel	2564	17	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	24.2331363624105	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGTATAAGTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	144824325	144859656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
tx.13313	chr3	+	1111	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	17	-1	-10	1	multi-exon	TRUE	canonical	3	509	junction_1	98.0487633782293	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	NA	False	NA	NA	False	NA	NA	NA	145281976	145309869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
tx.13314	chr3	+	1662	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	-5	682	-5	0	multi-exon	FALSE	canonical	3	657	junction_9	57.8243402122986	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	NA	False	NA	NA	NA	145281981	145309868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
tx.13315	chr3	-	2050	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	-33	2	-33	-2	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGAATGTATGTTGT	NA	False	NA	NA	False	NA	NA	NA	145355769	145352732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
tx.13316	chr3	+	3747	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	17	0	17	0	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	470	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTAGTGTCTGTCTCGT	NA	False	NA	NA	False	NA	NA	NA	145464446	145600032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
tx.13317	chr3	+	1850	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	27	72	27	-72	multi-exon	FALSE	canonical	3	334	junction_2	11.5	376	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGTGTCTGAGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	145630043	145640039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145630271_145636160_145636450_145638705
tx.13318	chr3	+	1531	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	14	2	-14	0	multi-exon	FALSE	canonical	3	242	junction_2	10.5	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAACTTAGCATCTTGT	NA	False	NA	NA	False	NA	NA	NA	145643782	145650582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145644084_145644652_145644852_145649551
tx.13319	chr3	+	1657	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	-13	0	-13	0	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAACTTAGCATCTTGT	NA	False	NA	NA	False	NA	NA	NA	145643783	145650582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
tx.1332	chr10	+	2082	7	FSM	ENSMUSG00000020009.14	ENSMUST00000020188.13	2112	7	30	0	21	0	multi-exon	FALSE	canonical	3	26	junction_4	3.14907393794853	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	False	NA	NA	False	NA	NA	NA	19467726	19485977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_19467946_19473163_19473279_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
tx.13320	chr3	+	1565	3	FSM	ENSMUSG00000036873.14	ENSMUST00000190472.2	724	3	-257	-584	-14	-1	multi-exon	FALSE	canonical	3	74	junction_2	94.5	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAACTTAGCATCTTG	NA	False	NA	NA	False	NA	NA	NA	145643782	145650581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145644084_145644652_145644852_145649516
tx.13321	chr3	+	1142	4	FSM	ENSMUSG00000036873.14	ENSMUST00000152783.2	514	4	-161	-467	-13	35	multi-exon	FALSE	canonical	3	74	junction_3	20.0388511535855	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTATTACTGAATGCC	NA	False	NA	NA	False	NA	NA	NA	145643783	145650032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649516
tx.13322	chr3	+	5575	7	FSM	ENSMUSG00000036863.13	ENSMUST00000212479.2	3810	7	-344	-1421	-77	0	multi-exon	FALSE	canonical	3	37	junction_1	19.8445346520284	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTATTGTAATTGATTT	NA	False	NA	NA	False	NA	NA	NA	145693547	145727475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145694925_145704217_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
tx.13323	chr3	+	5594	7	FSM	ENSMUSG00000036863.13	ENSMUST00000039517.11	5495	7	-99	0	-99	0	multi-exon	FALSE	canonical	3	28	junction_1	22.9685775692696	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTATTGTAATTGATTT	NA	False	NA	NA	False	NA	NA	NA	145693525	145727475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
tx.13324	chr3	+	3858	6	ISM	ENSMUSG00000036863.13	ENSMUST00000200546.2	4712	7	10150	0	5132	0	3prime_fragment	FALSE	canonical	3	76	junction_4	8.50881895447306	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTATTGTAATTGATTT	NA	False	NA	NA	False	NA	NA	NA	145704557	145727475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
tx.13325	chr3	+	3550	5	ISM	ENSMUSG00000036863.13	ENSMUST00000200546.2	4712	7	12670	0	7652	0	3prime_fragment	FALSE	canonical	3	76	junction_3	8.67107259801231	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTATTGTAATTGATTT	NA	False	NA	NA	False	NA	NA	NA	145707077	145727475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
tx.13326	chr3	+	2763	13	NIC	ENSMUSG00000036853.6	novel	2991	12	NA	NA	22	-272	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.08166599946613	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATACCTGCTTATTTT	NA	False	NA	NA	False	NA	NA	NA	145823226	145847289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_145823390_145827545_145827776_145830499_145830668_145833857_145834012_145834637_145834723_145834850_145834948_145836901_145837002_145839404_145839518_145839594_145839745_145843012_145843115_145843201_145843325_145845125_145845333_145846218
tx.13327	chr3	+	3549	15	NIC	ENSMUSG00000036825.13	novel	2416	15	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	66.5729613557446	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	146110392	146145894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_146110540_146120450_146120555_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
tx.13328	chr3	+	3441	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	0	5	0	-5	multi-exon	FALSE	canonical	3	150	junction_1	20.2423190195674	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	146110396	146145894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
tx.13329	chr3	+	3588	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106151.8	3232	14	1	-357	1	-5	multi-exon	FALSE	canonical	3	35	junction_1	53.8853703345785	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	146110397	146145894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_146110691_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
tx.1333	chr10	-	1470	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	12	6617	12	272	multi-exon	FALSE	canonical	3	127	junction_4	9.53874490281544	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACATGTCAATGAGGTTG	NA	False	NA	NA	False	NA	NA	NA	19783423	19736262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
tx.13330	chr3	+	3438	14	FSM	ENSMUSG00000036825.13	ENSMUST00000039021.11	3410	14	-21	-7	1	-4	multi-exon	FALSE	canonical	3	67	junction_10	37.3226774028969	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTTGTGTTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	146110397	146145895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
tx.13331	chr3	+	3586	14	NIC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	6	-5	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	45.0928037135147	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	146110402	146145894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_146110691_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
tx.13332	chr3	+	2883	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	3	6	3	-6	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACACAGTGACTTATT	5957	False	NA	NA	False	NA	NA	NA	146156227	146171598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
tx.13333	chr3	+	2724	6	NIC	ENSMUSG00000028189.13	novel	2892	7	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	10.6320270880016	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACACAGTGACTTATT	5977	False	NA	NA	False	NA	NA	NA	146156247	146171598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_146156386_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
tx.13334	chr3	+	530	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	37	26	37	-1	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	575	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCCTCCTTACTGAT	NA	False	NA	NA	False	NA	NA	NA	146205598	146211301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_146205776_146209014_146209155_146211088
tx.13335	chr3	-	1252	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	17	392	-1	-4	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	282	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTTTAGGTATTAAA	NA	False	NA	NA	False	NA	NA	NA	146227167	146212102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
tx.13336	chr3	-	4367	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	-25	5	5	-5	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	261	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTATTGAGTCTTCT	2673	False	NA	NA	False	NA	NA	NA	146518740	146435333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
tx.13337	chr3	-	5777	20	NNC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	525	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	6.88488649506014	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAACGTGCACTTTTATG	NA	False	NA	NA	False	NA	NA	NA	148695666	148521492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148695518
tx.13338	chr3	-	5767	20	FSM	ENSMUSG00000028184.13	ENSMUST00000200543.5	5509	20	-20	-238	-20	0	multi-exon	FALSE	canonical	2	5	junction_19	7.16253719419116	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGTGCACTTTTATGTA	NA	False	NA	NA	False	NA	NA	NA	148696211	148521490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148696075
tx.13339	chr3	-	1363	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	229	4	229	-2	multi-exon	FALSE	canonical	3	17	junction_3	6.40624695121879	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTTTGTGGGTATTTT	NA	False	NA	NA	False	NA	NA	NA	151871638	151799479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
tx.1334	chr10	+	5277	29	NNC	ENSMUSG00000071369.12	novel	5450	30	NA	NA	-278	-445	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	7.21773255706431	18	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCCCGAGAATTCTTA	NA	False	NA	NA	False	NA	NA	NA	19809939	20018054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19993875_19994069_19994160_19994330_20000697_20000884_20003397_20003504_20007710_20007955_20012639_20012753_20014008_20014122_20016394_20016472_20017268
tx.13340	chr3	+	2420	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	-43	-3	3	2	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	309	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGGTAAGTTGGATATGT	NA	False	NA	NA	False	NA	NA	NA	151916112	151938411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
tx.13341	chr3	+	2409	20	NIC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	332.523108563197	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGGTAAGTTGGATATGT	NA	False	NA	NA	False	NA	NA	NA	151916114	151938411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
tx.13342	chr3	+	2412	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGTTGGATATGTGGGT	NA	False	NA	NA	False	NA	NA	NA	151916112	151938415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
tx.13343	chr3	+	2422	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	55	4046	4	8	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	510	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGATATGTGGGTAA	NA	False	NA	NA	False	NA	NA	NA	151916113	151938417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
tx.13344	chr3	-	4849	15	NIC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	48.8133157644343	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTCTTAATGACTGT	NA	False	NA	NA	False	NA	NA	NA	152046043	151979483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_151982491_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
tx.13345	chr3	-	4967	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	11	-13	9	13	multi-exon	TRUE	canonical	3	131	junction_7	24.7194030852059	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTCACTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	152046033	151979472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
tx.13346	chr3	-	1701	6	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	-14	38373	8	11445	5prime_fragment	FALSE	canonical	3	188	junction_4	9.69535971483266	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTCTCTTAACTGTGG	NA	False	NA	NA	False	NA	NA	NA	152046034	152025586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
tx.13347	chr3	+	3873	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	14	-1	3	1	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	382	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGAATGTTGAATTTA	NA	False	NA	NA	False	NA	NA	NA	152052128	152098971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
tx.13348	chr3	+	3893	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	7	283	7	1	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	369	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGAATGTTGAATTTA	NA	False	NA	NA	False	NA	NA	NA	152052132	152098971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
tx.13349	chr3	+	4335	15	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	2	16	junction_4	74.0165797752953	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	NA	False	NA	NA	NA	152101621	152165112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
tx.1335	chr10	+	2468	11	ISM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	427	11057	-86	1067	5prime_fragment	FALSE	canonical	3	237	junction_6	27.5914841934971	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGCCTTCCTGTCTAC	NA	False	NA	NA	False	NA	NA	NA	20024643	20146211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105
tx.13350	chr3	+	4112	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	61.537420864598	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	NA	False	NA	NA	NA	152101631	152165114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_152101776_152125651_152125778_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
tx.13351	chr3	+	4272	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-13	3348	-13	1	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTGTTGTGGATTCCT	NA	False	NA	NA	False	NA	NA	NA	152101626	152165115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
tx.13352	chr3	+	7594	14	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	47	junction_6	52.5803977243618	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAATCATCCTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	152101639	152168453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
tx.13353	chr3	+	7899	15	NIC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	262	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	89.3496057115885	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTTCCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	152102030	152168462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
tx.13354	chr3	+	4214	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	-24	3349	-14	0	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	NA	False	NA	NA	NA	152102306	152165114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
tx.13355	chr3	+	3420	11	ISM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	31005	3349	-8200	0	3prime_fragment	FALSE	canonical	3	190	junction_1	22.9017466582791	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	NA	False	NA	NA	NA	152133335	152165114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
tx.13356	chr3	+	1552	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	7	3178	1	0	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTGTGTGTGCTGTC	3964	False	NA	NA	False	NA	NA	NA	152419743	152491485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
tx.13357	chr3	-	2236	2	ISM	ENSMUSG00000052544.10	ENSMUST00000199707.2	416	3	19055	-1899	19055	1899	3prime_fragment	FALSE	canonical	3	111	junction_1	0	106	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	152912365	152909103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_152911229_152912254
tx.13358	chr3	-	607	2	ISM	ENSMUSG00000052544.10	ENSMUST00000200397.5	8169	5	215675	213196	243	97415	internal_fragment	FALSE	canonical	3	80	junction_1	0	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCTCTCAAACAGCC	NA	False	NA	NA	False	NA	NA	NA	153215136	153117098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_153117509_153214939
tx.13359	chr3	-	1440	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	240.631627694519	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6123	False	NA	NA	False	NA	NA	NA	153618623	153612925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
tx.1336	chr10	+	3838	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	476	-62	-37	-6	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	643	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTAGGGTTCCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	20024692	20157330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
tx.13360	chr3	-	1560	9	FSM	ENSMUSG00000065463.3_ENSMUSG00000038975.15	ENSMUST00000196266.5	1271	9	-124	-165	-1	0	multi-exon	FALSE	canonical	3	426	junction_3	203.564140690348	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6904	False	NA	NA	False	NA	NA	NA	153617842	153612925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
tx.13361	chr3	-	1575	9	FSM	ENSMUSG00000065463.3_ENSMUSG00000038975.15	ENSMUST00000200209.5	1169	9	-123	-283	0	0	multi-exon	FALSE	canonical	3	607	junction_3	165.057565715722	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6905	False	NA	NA	False	NA	NA	NA	153617841	153612925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
tx.13362	chr3	-	1423	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6156	False	NA	NA	False	NA	NA	NA	153618590	153612925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
tx.13363	chr3	-	1376	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	5	0	5	0	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6105	False	NA	NA	False	NA	NA	NA	153618641	153612925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
tx.13364	chr3	-	1881	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	166	0	1	0	multi-exon	TRUE	canonical	3	875	junction_11	59.2580851965116	646	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	158	False	NA	NA	False	NA	NA	NA	153650103	153627993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
tx.13365	chr3	-	4405	6	FSM	ENSMUSG00000047583.10	ENSMUST00000052774.8	4490	6	-7	92	2	-3	multi-exon	FALSE	canonical	3	59	junction_2	5.35163526410386	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTTGTCTGTTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	154302739	154282159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
tx.13366	chr3	+	2040	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	467	0	-19	0	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	False	NA	NA	False	NA	NA	NA	154302814	154328819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
tx.13367	chr3	-	3721	4	FSM	ENSMUSG00000053870.8	ENSMUST00000194095.2	875	4	-43	-2803	-13	2	multi-exon	FALSE	canonical	3	7	junction_3	10.0332779621949	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTTTTGTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	154798877	154790552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798571
tx.13368	chr3	-	3485	4	FSM	ENSMUSG00000053870.8	ENSMUST00000066568.6	3518	4	31	2	-4	-2	multi-exon	FALSE	canonical	3	25	junction_3	2.16024689946929	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGAAATTTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	154799009	154790556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798935
tx.13369	chr3	+	4166	9	NIC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-19	9	intron_retention	TRUE	canonical	3	697	junction_7	86.7308156020684	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTGTTTATTAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	157239777	157253982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157248882_157250600_157250760_157252311
tx.1337	chr10	+	5449	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-12	0	0	0	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	836	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2793	False	NA	NA	False	NA	NA	NA	20188217	20218245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
tx.13370	chr3	+	2665	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	194	65	-5	9	multi-exon	TRUE	canonical	3	697	junction_8	81.8057017542553	1115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTGTTTATTAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	157239990	157253982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
tx.13371	chr3	+	7253	7	ISM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-24	-8	5	8	intron_retention	FALSE	canonical	3	775	junction_5	69.3511595673305	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAATGTTCTAAACTC	NA	False	NA	NA	False	NA	NA	NA	157240000	157254021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336
tx.13372	chr3	+	2722	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-21	36	8	4	multi-exon	FALSE	canonical	3	77	junction_9	297.644569915193	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTGTTGTTTATTAGA	NA	False	NA	NA	False	NA	NA	NA	157240003	157253977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
tx.13373	chr3	-	1800	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	14	1	-12	-1	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	931	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCTGATCCTACTT	NA	False	NA	NA	False	NA	NA	NA	157630700	157599885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
tx.13374	chr3	+	4279	13	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-263	-7	intron_retention	FALSE	canonical	3	16	junction_8	93.0043308430073	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTCATGATGTGCCTA	NA	False	NA	NA	False	NA	NA	NA	157652612	157713664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700288_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
tx.13375	chr3	+	4310	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-413	6	-238	-6	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	445	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCATGATGTGCCTAT	NA	False	NA	NA	False	NA	NA	NA	157652637	157713665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
tx.13376	chr3	+	4279	12	FSM	ENSMUSG00000039988.15	ENSMUST00000199727.5	3426	12	-253	-600	-253	-6	multi-exon	FALSE	canonical	3	11	junction_4	98.369517552294	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCATGATGTGCCTAT	NA	False	NA	NA	False	NA	NA	NA	157652622	157713665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
tx.13377	chr3	-	4673	11	NIC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	-2041	0	intron_retention	TRUE	canonical	3	70	junction_10	173.18937611759	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	157731347	157716555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879
tx.13378	chr3	-	2647	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	7	0	1	0	multi-exon	FALSE	canonical	3	573	junction_1	36.7913482463625	394	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	157737396	157716555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
tx.13379	chr3	-	2644	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	16	446	-8	0	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	376	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	157742260	157716555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
tx.1338	chr10	+	5442	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-65	-2235	0	-1	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2793	False	NA	NA	False	NA	NA	NA	20188217	20218244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
tx.13380	chr3	+	2631	14	NIC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	3	146	junction_2	190.962278254048	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	157742338	157772727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
tx.13381	chr3	+	2704	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	41	1397	1	1	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	939	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	157742339	157772727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
tx.13382	chr3	+	2447	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	4	-1	2	1	multi-exon	FALSE	canonical	3	70	junction_1	215.046296694973	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	157742340	157772727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
tx.13383	chr3	+	2500	11	FSM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	-33	-496	-8	0	multi-exon	FALSE	canonical	3	16	junction_7	17.3262806164508	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	NA	NA	NA	159201061	159235592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
tx.13384	chr3	+	3326	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	-3	0	-3	0	multi-exon	FALSE	canonical	3	37	junction_11	13.4778667659976	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	NA	NA	NA	159201066	159235592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
tx.13385	chr3	+	2679	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	32	848	32	272	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCCTGTCCCAACAGT	NA	False	NA	NA	False	NA	NA	NA	159545340	159640811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
tx.13386	chr3	+	2083	13	FSM	ENSMUSG00000028173.11	ENSMUST00000198878.2	2050	13	-33	0	32	0	multi-exon	FALSE	canonical	3	12	junction_12	7.78888096369861	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTATTTCCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	159545340	159644300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
tx.13387	chr4	-	2417	8	NNC	ENSMUSG00000028232.14	novel	2690	8	NA	NA	-3	-222	intron_retention	FALSE	canonical	0	0	junction_6	25.7840323946937	64	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTGAGATTCTTC	-14	True	NA	NA	False	NA	NA	NA	3574812	3549262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570330_3570373_3574703
tx.13388	chr4	+	4322	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	5	0	5	0	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	345	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTGTTTTATTTTT	-13	True	NA	NA	False	NA	NA	NA	3574879	3616619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
tx.13389	chr4	+	3167	12	NIC	ENSMUSG00000042228.15	novel	3463	13	NA	NA	-29	-278	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	13.7696516217777	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAAGGGATTGAATATCTC	-4	True	NA	NA	False	NA	NA	NA	3678085	3791334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_3678365_3738724_3738862_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
tx.1339	chr10	+	5301	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	3	3	0	-1	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	368	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2793	False	NA	NA	False	NA	NA	NA	20188217	20218244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
tx.13390	chr4	+	2954	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-20	529	-20	-528	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTATCAGATTCTC	5	True	NA	NA	False	NA	NA	NA	3678094	3791084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
tx.13391	chr4	+	2886	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	-32	533	-20	-533	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTTGTGTATCAGA	5	True	NA	NA	False	NA	NA	NA	3678094	3791079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
tx.13392	chr4	-	515	3	FSM	ENSMUSG00000028234.7	ENSMUST00000103009.5	582	3	70	-3	70	0	multi-exon	FALSE	canonical	3	6653	junction_2	831.5	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	180	False	NA	NA	False	NA	NA	NA	3835418	3834469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_3834684_3834935_3835010_3835191
tx.13393	chr4	-	506	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	64	3136	64	0	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	1073	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-3	True	NA	NA	False	NA	NA	NA	3835601	3834469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
tx.13394	chr4	-	4315	5	NIC	ENSMUSG00000003282.10	novel	4774	6	NA	NA	2	-406	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	1.11803398874989	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAATGGCGCCATATATG	NA	False	NA	NA	False	NA	NA	NA	3938421	3901401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_3904948_3905446_3905806_3908905_3909003_3915620_3915726_3938213
tx.13395	chr4	+	511	5	FSM	ENSMUSG00000042198.13	ENSMUST00000149544.8	426	5	-31	-54	-29	0	multi-exon	FALSE	canonical	3	70	junction_1	158.419537936455	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3938858	3943526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_3938963_3939423_3939527_3941245_3941312_3942720_3942820_3943387
tx.13396	chr4	+	566	5	FSM	ENSMUSG00000042198.13	ENSMUST00000108386.8	524	5	-39	-3	-39	0	multi-exon	FALSE	canonical	3	128	junction_1	133.401649165218	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3938848	3943526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_3938963_3939378_3939527_3941245_3941312_3942720_3942820_3943387
tx.13397	chr4	+	772	6	FSM	ENSMUSG00000042198.13	ENSMUST00000120732.8	711	6	-63	2	-37	0	multi-exon	FALSE	canonical	3	13	junction_4	192.067279878693	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3938850	3943526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3942987_3943027_3943387
tx.13398	chr4	+	725	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	-55	2	-29	0	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3938858	3943526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
tx.13399	chr4	-	6543	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	-2	2	-2	-2	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATGCTGTGTTGGTGT	-29	True	NA	NA	False	NA	NA	NA	4793357	4762485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
tx.1340	chr10	+	5296	12	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	221	junction_3	266.237450718882	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2793	False	NA	NA	False	NA	NA	NA	20188217	20218245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
tx.13400	chr4	+	3320	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	16	-2718	-15	-1	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGCTGATTTCTTTGT	-1	True	NA	NA	False	NA	NA	NA	5644105	5801100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
tx.13401	chr4	+	3215	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	-6	1	-6	-1	multi-exon	FALSE	canonical	3	35	junction_1	17	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGCTGATTTCTTTGT	8	True	NA	NA	False	NA	NA	NA	5644114	5801100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_5644411_5729570_5729658_5798268
tx.13402	chr4	+	6624	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	5	13	5	-13	multi-exon	TRUE	canonical	3	103	junction_2	16.4614577676685	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGAAGCCTCCTTTCGT	-5	True	NA	NA	False	NA	NA	NA	6191102	6221675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
tx.13403	chr4	+	2089	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	31	625	4	4	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	286	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTCTGTGCCTGCATC	-1	True	NA	NA	False	NA	NA	NA	6365680	6395659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
tx.13404	chr4	+	2079	9	FSM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	7	0	7	0	multi-exon	FALSE	canonical	3	130	junction_4	110.946425697271	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGTCTGTCTGTGCCTG	2	True	NA	NA	False	NA	NA	NA	6365683	6395655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
tx.13405	chr4	+	2005	8	ISM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	11425	632	234	-3	3prime_fragment	FALSE	canonical	3	359	junction_3	43.6100531379392	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCGTCTGTCTGTGC	9110	False	NA	NA	False	NA	NA	NA	6377074	6395652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
tx.13406	chr4	-	3524	31	FSM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	-20	3	-20	-3	multi-exon	FALSE	canonical	3	82	junction_12	11.571804814577	131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTCTTATCTTATTT	5	True	NA	NA	False	NA	NA	NA	6454291	6396209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
tx.13407	chr4	-	3845	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	-2	10	-2	-10	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCAAATCTATGTTGC	-3	True	NA	NA	False	NA	NA	NA	8239043	8143371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
tx.13408	chr4	+	2076	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-14	71	-14	-71	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	496	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCCTTCTCATGATGAG	-31	True	NA	NA	False	NA	NA	NA	8535629	8607707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
tx.13409	chr4	+	10476	38	NIC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	28	-9	combination_of_known_junctions	TRUE	canonical	3	42	junction_5	13.3684101547544	47	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGATGTAGTTATAGAAT	7	True	NA	NA	False	NA	NA	NA	8690433	8867650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
tx.1341	chr10	+	4862	9	ISM	ENSMUSG00000037608.17	ENSMUST00000191438.2	2383	10	-666	2112	-666	0	5prime_fragment	FALSE	canonical	3	294	junction_7	208.053328500171	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	20198799	20218247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
tx.13410	chr4	+	9627	38	NIC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	-17	7	combination_of_known_junctions	FALSE	canonical	3	11	junction_31	15.9110933823654	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGTCCAAGTCATG	26	True	NA	NA	False	NA	NA	NA	8690452	8866817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
tx.13411	chr4	-	4252	22	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-10	-2205	combination_of_known_junctions	TRUE	canonical	0	0	junction_19	110.676665395369	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	-6	True	NA	NA	False	NA	NA	NA	9669096	9451283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9668780
tx.13412	chr4	-	4441	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	48	2205	-28	-2205	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	0	True	NA	NA	False	NA	NA	NA	9669114	9451283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
tx.13413	chr4	-	4386	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	55	2205	-21	-2205	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	7	False	9669114	NA	False	NA	NA	NA	9669107	9451283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
tx.13414	chr4	-	4368	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-30	-2205	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	122.196055718087	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	NA	False	NA	NA	False	NA	NA	NA	9669116	9451283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
tx.13415	chr4	-	2783	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	56	-3	-20	3	multi-exon	FALSE	canonical	0	0	junction_10	142.503411265212	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTGTCATTATTTTGAA	8	False	9669114	NA	False	NA	NA	NA	9669106	9575263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
tx.13416	chr4	-	2839	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	46	-1	-30	1	multi-exon	FALSE	canonical	0	0	junction_11	124.875606744325	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGATTGTCATTATTTTG	NA	False	NA	NA	False	NA	NA	NA	9669116	9575265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
tx.13417	chr4	+	2114	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	6	-4	6	0	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTCTGTGCAATTAT	NA	False	NA	NA	False	NA	NA	NA	10874503	10899425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
tx.13418	chr4	-	2920	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	57	0	57	0	multi-exon	FALSE	canonical	3	844	junction_1	0	996	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTTATATTG	26	False	11007645	NA	False	NA	NA	NA	11007619	10988661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_10991355_11007392
tx.13419	chr4	-	1084	9	FSM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	1	-3	1	3	multi-exon	TRUE	canonical	0	0	junction_7	119.468549731718	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTGAGTTTTTTT	-18	True	NA	NA	False	NA	NA	NA	11076203	11051041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
tx.1342	chr10	+	2306	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	34	-349	-15	349	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTCCATTTTGAACGCA	NA	False	NA	NA	False	NA	NA	NA	20223549	20237399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
tx.13420	chr4	-	1028	8	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	146.340531024075	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTGAGTTTTTTT	-19	True	NA	NA	False	NA	NA	NA	11076204	11051041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073143_11073244_11075979
tx.13421	chr4	-	958	9	NNC	ENSMUSG00000050323.15	novel	675	6	NA	NA	-7	-802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	143.326550227095	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGAGCGTCACAGCACA	NA	False	NA	NA	False	NA	NA	NA	11076212	11052014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_11052064_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
tx.13422	chr4	+	5400	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	4	0	4	0	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	2	True	NA	NA	False	NA	NA	NA	11156434	11174379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
tx.13423	chr4	+	5435	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	5	True	NA	NA	False	NA	NA	NA	11156437	11174379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
tx.13424	chr4	-	2857	2	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTTTCATGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	11191288	11175961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_11178675_11191144
tx.13425	chr4	+	2641	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	53	214	47	-207	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAAAGTTTTGCCATT	0	True	NA	NA	False	NA	NA	NA	11191782	11204468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
tx.13426	chr4	-	3190	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_20	86.2362672370636	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACAATTTAGTGGTGT	0	True	NA	NA	False	NA	NA	NA	11254257	11204380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
tx.13427	chr4	-	3204	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	18	-2	18	0	multi-exon	TRUE	canonical	3	373	junction_22	31.9212464720813	653	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACAATTTAGTGGTGT	17	False	11254257	NA	False	NA	NA	NA	11254240	11204380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
tx.13428	chr4	-	3072	26	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	19	4371	19	1	5prime_fragment	FALSE	canonical	3	373	junction_21	32.4407151585781	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGATCTTGTTTGTTCA	18	False	11254257	NA	False	NA	NA	NA	11254239	11208753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
tx.13429	chr4	-	6700	20	NNC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.2903026742549	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTCGTACTTGATCTT	-11	True	NA	NA	False	NA	NA	NA	11322138	11261314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_11262879_11262933_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
tx.1343	chr10	+	3599	18	ISM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	78	61745	0	-51784	5prime_fragment	FALSE	canonical	3	12	junction_5	6.24859845877153	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGACCACTAATTATT	NA	False	NA	NA	False	NA	NA	NA	20828523	20894583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811
tx.13430	chr4	-	6754	19	FSM	ENSMUSG00000045205.17	ENSMUST00000084892.12	6754	19	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_13	8.17176711475418	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTCGTACTTGATCTT	-10	True	NA	NA	False	NA	NA	NA	11322137	11261314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
tx.13431	chr4	+	6954	23	NIC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-20	5	intron_retention	FALSE	canonical	3	55	junction_9	10.2936231563988	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTATGAGTCTCATTC	-1	True	NA	NA	False	NA	NA	NA	11486022	11550689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
tx.13432	chr4	+	6377	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	51	78	-34	-78	multi-exon	TRUE	canonical	3	55	junction_9	10.2468585254619	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCATATTTCCCCTAAG	-15	True	NA	NA	False	NA	NA	NA	11486008	11550606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
tx.13433	chr4	+	2431	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	-22	-6	-2	6	multi-exon	FALSE	canonical	3	32	junction_3	85.9883713068226	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGAATTTATGTTATG	-27	True	NA	NA	False	NA	NA	NA	11558919	11585750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
tx.13434	chr4	+	2505	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	91.7261549395809	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGAATTTATGTTATGT	-20	True	NA	NA	False	NA	NA	NA	11558926	11585751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11583676
tx.13435	chr4	+	2914	15	FSM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	-42	-2	8	2	multi-exon	FALSE	canonical	3	142	junction_12	66.7496464868725	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTGTATCCTTAAGT	-17	True	NA	NA	False	NA	NA	NA	11558929	11615807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
tx.13436	chr4	-	4176	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	21	4	-4	-4	multi-exon	FALSE	canonical	3	21	junction_1	0	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAATGTGAAATCTGGC	-17	True	NA	NA	False	NA	NA	NA	11966431	11958187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_11962234_11966301
tx.13437	chr4	-	4063	3	FSM	ENSMUSG00000049225.15	ENSMUST00000108299.2	2588	3	-4	-1471	-4	-152	multi-exon	FALSE	canonical	3	47	junction_2	3	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGCCTGTGTGGGTTT	-17	True	NA	NA	False	NA	NA	NA	11966431	11958335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_11962234_11965613_11965649_11966301
tx.13438	chr4	-	4855	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108301.8	2635	2	-599	-1621	0	-2	multi-exon	FALSE	canonical	3	53	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTGAAATCTGGCTG	-6	True	NA	NA	False	NA	NA	NA	11966420	11958185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_11962234_11965613
tx.13439	chr4	-	3026	3	FSM	ENSMUSG00000049225.15	ENSMUST00000095144.10	2506	3	-520	0	5	0	multi-exon	FALSE	canonical	3	10	junction_2	21.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGCTATGTTTAATTC	-33	True	NA	NA	False	NA	NA	NA	11966447	11959806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_11962234_11965613_11965649_11965883
tx.1344	chr10	+	4779	24	FSM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	71	1	-7	0	multi-exon	FALSE	canonical	3	12	junction_5	6.91700734047638	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCTGGTTTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	20828516	20956327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811_20893933_20917084_20917141_20930879_20931043_20934051_20934150_20948441_20948501_20950273_20950377_20954982
tx.13440	chr4	-	3460	28	FSM	ENSMUSG00000049488.15	ENSMUST00000050686.10	3456	28	-8	4	-8	4	multi-exon	FALSE	canonical	3	27	junction_10	5.81280927905584	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGGTTTGCGTTAT	-4	True	NA	NA	False	NA	NA	NA	12087965	12039358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
tx.13441	chr4	+	3400	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-61	28	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	14.4299072146089	47	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	-7	True	NA	NA	False	NA	NA	NA	12089377	12096271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_12089506_12089662_12089728_12092522_12092573_12093114
tx.13442	chr4	+	3545	3	FSM	ENSMUSG00000052137.12	ENSMUST00000095143.9	3147	3	-49	-349	-49	28	multi-exon	FALSE	canonical	3	33	junction_1	14.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	5	True	NA	NA	False	NA	NA	NA	12089389	12096271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_12089728_12092522_12092573_12093114
tx.13443	chr4	+	3418	4	FSM	ENSMUSG00000052137.12	ENSMUST00000063839.6	3327	4	-63	-28	-61	28	multi-exon	FALSE	canonical	2	9	junction_1	21.6692306175267	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	-7	True	NA	NA	False	NA	NA	NA	12089377	12096271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_12089524_12089662_12089728_12092522_12092573_12093114
tx.13444	chr4	-	1138	8	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	33	52908	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	130.899556445204	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACACAGTCTTTCT	-6	True	NA	NA	False	NA	NA	NA	12171838	12100500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
tx.13445	chr4	+	2971	4	NNC	ENSMUSG00000046667.15	novel	2949	4	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	14.7196014438797	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCCTGTATTCATTG	0	True	NA	NA	False	NA	NA	NA	12140267	12146741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_12140384_12140540_12140606_12143409_12143460_12144001
tx.13446	chr4	-	1147	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	29	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	135.606423302203	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATAGTCTTTCTTTCAT	-10	True	NA	NA	False	NA	NA	NA	12171842	12153721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
tx.13447	chr4	+	2221	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-52	1116	multi-exon	FALSE	canonical	3	4269	junction_1	0	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCTGACTGGCTGGCA	-4	True	NA	NA	False	NA	NA	NA	12232780	12235067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr4_+_12232839_12232904
tx.13449	chr4	+	1850	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	709	4092	multi-exon	FALSE	canonical	3	49	junction_1	0	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	400	False	NA	NA	False	NA	NA	NA	12233541	12238043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr4_+_12233967_12236618
tx.1345	chr10	+	5520	2	NIC	ENSMUSG00000019986.18	novel	4829	24	NA	NA	459	0	intron_retention	FALSE	canonical	3	21	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGGTTTCTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	20946202	20956328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_20950377_20954982
tx.13450	chr4	-	4394	2	Antisense	novelGene_ENSMUSG00000060989.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	100	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACCTCCATAACTACCT	NA	False	NA	NA	False	NA	NA	NA	12238043	12233601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_-_12235270_12235317
tx.13451	chr4	+	1502	5	FSM	ENSMUSG00000055963.13	ENSMUST00000183345.2	3545	5	-32	2075	-12	408	multi-exon	FALSE	canonical	2	7	junction_2	1.87082869338697	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCACATGTTACTTTTA	24	False	NA	NA	False	NA	NA	NA	12906825	12981478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_12906939_12917915_12918066_12962944_12963024_12974729_12974816_12980404
tx.13452	chr4	+	3697	12	NIC	ENSMUSG00000006586.16	novel	5783	11	NA	NA	-250	26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.06505758029101	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGGTTGTCCTCAAG	393	False	NA	NA	False	NA	NA	NA	13743185	13891143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_13743730_13771375_13771546_13835632_13835771_13837759_13838002_13841797_13841888_13846775_13846958_13859810_13860062_13865200_13865287_13865830_13866033_13875476_13875546_13881049_13881241_13889611
tx.13453	chr4	-	3018	6	NIC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	-32	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	134.630457178159	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATTCAAATTGT	-9	True	NA	NA	False	NA	NA	NA	14826427	14809504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14825498_14825654_14826290
tx.13454	chr4	-	3106	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	151	0	-41	0	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	482	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTGTATATTCAAATT	-18	True	NA	NA	False	NA	NA	NA	14826436	14809506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
tx.13455	chr4	+	2285	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	143	-89	143	89	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	237	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGTTCTATTTCTTC	-49	True	NA	NA	False	NA	NA	NA	14864218	14915265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
tx.13456	chr4	+	997	6	FSM	ENSMUSG00000086587.8	ENSMUST00000136992.8	876	6	-120	-1	-120	1	multi-exon	FALSE	canonical	3	31	junction_5	12.687001221723	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGTACAGAATTTTTG	675	False	NA	NA	False	NA	NA	NA	14930540	14953031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14947438_14947546_14952620
tx.13457	chr4	+	4721	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-56	5	-56	-5	multi-exon	FALSE	canonical	3	428	junction_2	4.5	822	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTTCTCTCTTCTCTT	0	True	NA	NA	False	NA	NA	NA	15265774	15286748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_15266750_15281006_15281163_15283158
tx.13458	chr4	+	3714	2	ISM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	15206	7	15206	-7	3prime_fragment	FALSE	canonical	3	428	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTCTCTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	15281036	15286746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_15281163_15283158
tx.13459	chr4	-	2835	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	121	3	-111	-3	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAATCTTGTAGAGGTTG	-13	True	NA	NA	False	NA	NA	NA	15945386	15917242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
tx.1346	chr10	-	3420	15	FSM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	-6	-340	-6	-1	multi-exon	FALSE	canonical	2	3	junction_10	4.58257569495584	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGATGTCTCTCGAT	NA	False	NA	NA	False	NA	NA	NA	21036889	21000834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
tx.13460	chr4	+	2517	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	16	0	16	0	multi-exon	TRUE	canonical	3	165	junction_3	27.9629914152418	257	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-29	True	NA	NA	False	NA	NA	NA	15957940	15992589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
tx.13461	chr4	+	2435	16	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	53.2213825032341	45	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-29	True	NA	NA	False	NA	NA	NA	15957940	15992589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964328_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
tx.13462	chr4	-	2526	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	29	103	29	3	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGAACACTGAGT	29	False	NA	NA	False	NA	NA	NA	16013859	15997223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
tx.13463	chr4	-	2490	6	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-32	2	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	32.8852550545073	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGTGTGAACACTGAG	-8	True	NA	NA	False	NA	NA	NA	16013853	15997224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013686
tx.13464	chr4	-	2689	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	43.3912433562349	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGTGTGAACACTGA	-8	True	NA	NA	False	NA	NA	NA	16013853	15997225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013515
tx.13465	chr4	-	2696	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	-14	10	-14	-2	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTATCTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	16163661	16122742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
tx.13466	chr4	-	2775	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	29.5707583951801	37	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTCTTTTTATCTTCTG	NA	False	NA	NA	False	NA	NA	NA	16163665	16122744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
tx.13467	chr4	-	5646	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	4	-2	4	2	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCTGTGTTTGGTTTTC	-9	True	NA	NA	False	NA	NA	NA	19570104	19519251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
tx.13468	chr4	+	1186	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-107	655	-62	-655	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTTCTTCACAAGTAAAT	28	False	NA	NA	False	NA	NA	NA	19575099	19606277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
tx.13469	chr4	-	4516	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-11	-549	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_21	39.9306473428897	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTATCGGCTTTCATT	172	False	NA	NA	False	NA	NA	NA	19709004	19610221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
tx.1347	chr10	+	2639	5	FSM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	-24	10	-4	-7	multi-exon	FALSE	canonical	3	88	junction_4	452.231688407613	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAGTATGTTTGCATG	NA	False	NA	NA	False	NA	NA	NA	21171912	21187098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997
tx.13470	chr4	-	6365	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-20	95	-20	-95	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTTTTAATAGCCACA	163	False	NA	NA	False	NA	NA	NA	19709013	19608397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
tx.13472	chr4	-	4540	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-46	-549	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_17	40.8971440187318	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTATCGGCTTTCATT	137	False	NA	NA	False	NA	NA	NA	19709039	19610221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
tx.13473	chr4	+	2587	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	275	0	-75	0	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	292	False	NA	NA	False	NA	NA	NA	20008281	20030470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
tx.13474	chr4	+	2806	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	-68	315	3	0	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	370	False	NA	NA	False	NA	NA	NA	20008359	20030470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
tx.13475	chr4	+	1291	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	33	641	33	-641	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCTGTGATTATTG	8	True	NA	NA	False	NA	NA	NA	20042084	20066109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
tx.13476	chr4	+	1423	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	-17	0	-3	0	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTTCTGGATTTT	-22	True	NA	NA	False	NA	NA	NA	21727737	21747962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
tx.13477	chr4	+	3342	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	23	0	-4	0	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	-11	True	NA	NA	False	NA	NA	NA	21727748	21750546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
tx.13478	chr4	+	3450	13	FSM	ENSMUSG00000028252.21	ENSMUST00000065928.11	3484	13	34	0	-6	0	multi-exon	FALSE	canonical	3	29	junction_12	125.983023547707	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	-25	True	NA	NA	False	NA	NA	NA	21727734	21750546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482_21747577_21748136
tx.13479	chr4	-	1562	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	25	1	25	-1	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGCATGTATTTCTTTA	8	True	NA	NA	False	NA	NA	NA	21767187	21757382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
tx.1348	chr10	+	2758	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-19	-6	-4	6	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	1470	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAAATGTGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	21171912	21244788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
tx.13480	chr4	+	6006	18	FSM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	-3	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_13	7.72986837222362	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTAGTTCCCTGGCTTG	-11	True	NA	NA	False	NA	NA	NA	21776268	21837870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
tx.13481	chr4	+	2482	8	ISM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	-3	37560	-3	1649	5prime_fragment	FALSE	canonical	3	17	junction_5	4.80221037542046	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATATTGTTGAAGAAT	-11	True	NA	NA	False	NA	NA	NA	21776268	21800310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604
tx.13482	chr4	+	3101	11	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	465	1219	0	0	intron_retention	FALSE	canonical	3	310	junction_8	50.2622124463299	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	NA	False	NA	NA	NA	21848047	21875256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
tx.13483	chr4	+	4869	9	NIC	ENSMUSG00000028248.16	novel	2438	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	402	junction_3	32.8785644455472	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	NA	False	NA	NA	NA	21848047	21875256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
tx.13484	chr4	+	4072	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	465	8	0	0	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	461	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGCTGGCTATGA	-11	True	NA	NA	False	NA	NA	NA	21848047	21876467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
tx.13485	chr4	+	2652	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGCCATTGTGC	-11	True	NA	NA	False	NA	NA	NA	21879671	21912162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
tx.13486	chr4	+	6080	5	FSM	ENSMUSG00000028246.14	ENSMUST00000123481.2	4465	5	-81	-1534	-53	1534	multi-exon	FALSE	canonical	2	7	junction_3	3.56195171219375	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCAGCTCAGTTTATTC	143	False	NA	NA	False	NA	NA	NA	21931275	21998373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21982385_21982503_21993297
tx.13487	chr4	+	6463	6	FSM	ENSMUSG00000028246.14	ENSMUST00000029908.8	2627	6	-219	-3617	-217	1529	multi-exon	FALSE	canonical	2	5	junction_3	4.02988833592198	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGGATCAGCTCAGTT	-21	True	NA	NA	False	NA	NA	NA	21931111	21998368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21958443_21958668_21982385_21982503_21993297
tx.13488	chr4	+	2523	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	23	0	-5	0	multi-exon	FALSE	canonical	3	42	junction_4	14.7627063914446	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-16	True	NA	NA	False	NA	NA	NA	22357565	22434091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
tx.13489	chr4	+	2533	9	NNC	ENSMUSG00000040410.15	novel	2546	9	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	19.0028780714922	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTGTTAAGAATCT	-13	True	NA	NA	False	NA	NA	NA	22357568	22434089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_22357682_22375660_22375771_22376480_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
tx.1349	chr10	+	2609	12	FSM	ENSMUSG00000019970.16	ENSMUST00000164659.8	2602	12	-6	-1	-6	1	multi-exon	FALSE	canonical	3	251	junction_1	208.20654874943	392	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTGTCATGTGTTAA	NA	False	NA	NA	False	NA	NA	NA	21854564	21875798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
tx.13490	chr4	+	1355	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	-3	-2	-3	2	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTCTCGTTGATAA	-8	True	NA	NA	False	NA	NA	NA	24496458	24503415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
tx.13491	chr4	+	4470	24	FSM	ENSMUSG00000045751.17	ENSMUST00000108222.9	4478	24	8	0	-3	0	multi-exon	FALSE	canonical	3	129	junction_15	74.8650203134992	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-8	True	NA	NA	False	NA	NA	NA	24496458	24602950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
tx.13492	chr4	+	4481	24	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	64	junction_15	79.749300001076	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-16	True	NA	NA	False	NA	NA	NA	24496450	24602950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
tx.13493	chr4	-	1320	7	NNC	ENSMUSG00000040387.17	novel	5970	8	NA	NA	1	-12163	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.0368111930481	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGATCATGGTG	NA	False	NA	NA	False	NA	NA	NA	24851123	24662006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_24662252_24682054_24682271_24708952_24709052_24743857_24743966_24792616_24792798_24800805_24800891_24850737
tx.13494	chr4	+	2395	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-43	6	5	-6	multi-exon	FALSE	canonical	3	446	junction_1	0	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTTTTCTGGTTTTT	-32	True	NA	NA	False	NA	NA	NA	24898087	24903499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_24898677_24901693
tx.13495	chr4	+	2117	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	13	1502	13	-6	multi-exon	FALSE	canonical	3	446	junction_2	23.5	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTTTTCTGGTTTTT	-24	True	NA	NA	False	NA	NA	NA	24898095	24903499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_24898303_24898572_24898677_24901693
tx.13496	chr4	-	3866	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	6	7	combination_of_known_junctions	TRUE	canonical	3	78	junction_1	36.6180404503927	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACAGTCTATGTAATGC	0	True	NA	NA	False	NA	NA	NA	25281815	25248592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
tx.13497	chr4	-	4316	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	3	-3	3	-2	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATGTTATACAGTCT	-3	True	NA	NA	False	NA	NA	NA	25281818	25248601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
tx.13498	chr4	-	2107	15	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	0	5731	0	-4189	5prime_fragment	FALSE	canonical	3	188	junction_2	18.7215089658709	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTTTCCAGTAGTTTC	-6	True	NA	NA	False	NA	NA	NA	25281821	25254335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
tx.13499	chr4	-	4994	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	78	7062	78	2504	multi-exon	FALSE	canonical	3	36	junction_2	8.5	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAAGCTACTCAGATTT	381	False	NA	NA	False	NA	NA	NA	25800068	25616393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_25620821_25709027_25709115_25799588
tx.1350	chr10	+	2435	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	17	4	0	1	multi-exon	FALSE	canonical	3	717	junction_1	88.4218850289119	848	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTGTCATGTGTTAA	NA	False	NA	NA	False	NA	NA	NA	21870581	21875798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
tx.13500	chr4	-	4859	5	FSM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	5	3	5	-3	multi-exon	FALSE	canonical	3	44	junction_4	9.33742469849155	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGGAAATCTATTCATT	5	True	NA	NA	False	NA	NA	NA	26346886	26324508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346596
tx.13501	chr4	-	4667	5	NIC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	18	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	23.7170824512628	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTGGAAATCTATTCAT	-16	True	NA	NA	False	NA	NA	NA	26346873	26324509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346774
tx.13502	chr4	+	6749	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	0	-3	0	3	multi-exon	TRUE	canonical	2	9	junction_4	5.10170008428563	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAAATCCTGTCTCCA	0	True	NA	NA	False	NA	NA	NA	28813130	28967502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
tx.13503	chr4	+	5308	17	NIC	ENSMUSG00000028289.13	novel	6746	17	NA	NA	6	-733	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	5.85768725692999	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAACTATAACACAATGTG	6	False	NA	NA	False	NA	NA	NA	28813136	28966082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938765_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
tx.13504	chr4	+	4738	16	FSM	ENSMUSG00000028284.14	ENSMUST00000080933.13	5669	16	-129	1060	-106	-1060	multi-exon	TRUE	canonical	3	14	junction_11	45.1522855333912	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGGAATGGTAGCTGG	39	False	NA	NA	False	NA	NA	NA	31963990	32022407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
tx.13505	chr4	+	7072	16	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-8	-1066	intron_retention	FALSE	canonical	3	147	junction_6	20.3262282668368	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGTATGTAGGAATGGT	-32	True	NA	NA	False	NA	NA	NA	31964088	32022401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
tx.13506	chr4	+	4713	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-6	1066	-6	-1066	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGTATGTAGGAATGGT	-30	True	NA	NA	False	NA	NA	NA	31964090	32022401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
tx.13507	chr4	+	8125	5	ISM	ENSMUSG00000028284.14	ENSMUST00000131310.2	590	7	5808	-3908	5808	1	3prime_fragment	FALSE	canonical	3	178	junction_1	8.5146931829632	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTTTACTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	31998280	32023468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
tx.13508	chr4	+	6595	11	FSM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-33	-5	-11	5	multi-exon	FALSE	canonical	3	150	junction_1	42.596243965871	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTATGCTTCTTTTGTT	-9	True	NA	NA	False	NA	NA	NA	32615439	32653270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
tx.13509	chr4	+	6511	10	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-13	2	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	77.5370878999205	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTATGCTTCTTTT	-11	True	NA	NA	False	NA	NA	NA	32615437	32653267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_32615493_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
tx.1351	chr10	-	660	3	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	118	junction_1	2.5	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGGTGTCAGTGGCTC	NA	False	NA	NA	False	NA	NA	NA	21934510	21930760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_-_21931017_21933427_21933570_21934248
tx.13510	chr4	+	6802	11	FSM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	0	-3	0	3	multi-exon	FALSE	canonical	3	20	junction_1	76.4659401302305	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTAGTATGCTTCTTTTG	-5	True	NA	NA	False	NA	NA	NA	32615477	32653268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_32615740_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
tx.13512	chr4	+	3456	4	ISM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	28504	0	19898	0	3prime_fragment	FALSE	canonical	3	269	junction_2	25.694789787469	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	32643981	32653265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_32646661_32648026_32648127_32649172_32649258_32652673
tx.13513	chr4	+	5000	24	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	92535	3	-917	-3	3prime_fragment	FALSE	canonical	3	51	junction_5	33.8587078651663	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCAGGGTTTACTTTGGT	NA	False	NA	NA	False	NA	NA	NA	32749653	32775204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
tx.13514	chr4	+	3893	19	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	97310	2	3858	-2	3prime_fragment	FALSE	canonical	3	60	junction_1	28.6084680548338	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGGGTTTACTTTGGTT	3735	False	NA	NA	False	NA	NA	NA	32754428	32775205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
tx.13515	chr4	+	1336	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	13	-884	13	708	multi-exon	FALSE	canonical	3	270	junction_2	3	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCATCATTAAGGAGCAT	-2	True	NA	NA	False	NA	NA	NA	32800265	32802267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_32800336_32800609_32800751_32801142
tx.13516	chr4	-	4422	15	NIC	ENSMUSG00000040183.14	novel	4683	17	NA	NA	3	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	8.03214206313913	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTACTTTTTAGTCAT	71	False	NA	NA	False	NA	NA	NA	32923452	32804029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32923300
tx.13517	chr4	-	4465	16	FSM	ENSMUSG00000040183.14	ENSMUST00000084750.8	4444	16	-21	0	-6	0	multi-exon	FALSE	canonical	2	12	junction_10	6.1369554521947	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATTCTACTTTTTA	-8	True	NA	NA	False	NA	NA	NA	32950847	32804034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32950746
tx.13518	chr4	-	4671	16	NNC	ENSMUSG00000040183.14	novel	4444	16	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.70165927288111	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATTCTACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	32950894	32804034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32826929_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32950746
tx.13519	chr4	+	5019	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAAGTGGGGTCTCT	2	True	NA	NA	False	NA	NA	NA	32983025	33022180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
tx.1352	chr10	-	566	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181614.2	548	2	-10	-8	-10	8	multi-exon	FALSE	canonical	3	41	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTTTTATCATTCT	NA	False	NA	NA	False	NA	NA	NA	22024732	22020192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_22020414_22024387
tx.13520	chr4	+	3564	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	-36	2	-36	-2	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATTTACTGGTGTTAC	-68	True	NA	NA	False	NA	NA	NA	33031379	33052361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
tx.13521	chr4	+	3408	7	NIC	ENSMUSG00000028277.14	novel	3530	8	NA	NA	-7	-9	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	28.5214344348636	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTAAGTTATTTACTG	-39	True	NA	NA	False	NA	NA	NA	33031408	33052354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33049681
tx.13522	chr4	+	1886	6	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	19808	0	19808	0	3prime_fragment	FALSE	canonical	3	14	junction_2	4.22374241638857	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGATGTCATCACTGACT	NA	False	NA	NA	False	NA	NA	NA	33152328	33163588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
tx.13523	chr4	-	5533	7	FSM	ENSMUSG00000054659.14	ENSMUST00000098181.9	1445	7	-259	-3829	45	3829	multi-exon	FALSE	canonical	3	17	junction_1	3.71558280160133	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAATGTCTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	33189692	33170400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_33174481_33174743_33174852_33179204_33179341_33181704_33181860_33183076_33183220_33187047_33187197_33188930
tx.13524	chr4	-	1326	4	FSM	ENSMUSG00000054659.14	ENSMUST00000119167.2	1339	4	18	-5	18	5	multi-exon	FALSE	canonical	3	23	junction_1	0.471404520791032	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGATTTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	33189719	33181614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_33181860_33183076_33183220_33187047_33187197_33188930
tx.13525	chr4	+	3048	4	NIC	ENSMUSG00000054679.9	novel	829	5	NA	NA	-9	4	intron_retention	FALSE	canonical	3	8	junction_3	0.942809041582063	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTGTCCTGAC	8	True	NA	NA	False	NA	NA	NA	33209253	33233344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_33209371_33223567_33223673_33225764_33226170_33230923
tx.13526	chr4	-	1678	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	-34	4	-34	-4	multi-exon	FALSE	canonical	3	146	junction_1	0	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTAGTCTTGGCTTTTTGTG	193	False	NA	NA	False	NA	NA	NA	33248544	33245426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_33246508_33247947
tx.13527	chr4	+	4321	17	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	-1	-4	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_3	92.7669922103223	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTGTGTCTTTCCTGT	-20	True	NA	NA	False	NA	NA	NA	33310326	33502610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
tx.13528	chr4	+	4129	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	24	4	7	-4	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	286	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTGTGTCTTTCCTGT	-12	True	NA	NA	False	NA	NA	NA	33310334	33502610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
tx.13529	chr4	+	1732	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-335	0	-335	0	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	641	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGTTTCCGAATTG	-23	True	NA	NA	False	NA	NA	NA	34550601	34566908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
tx.1353	chr10	+	1500	8	NIC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	-15	4	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	37.3625371685793	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTCCAGAAGTTTATAT	NA	False	NA	NA	False	NA	NA	NA	22034452	22059820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_22034618_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
tx.13530	chr4	-	2222	20	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	1	3582	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	162.441193280024	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTGTGGGGTTACT	-4	True	NA	NA	False	NA	NA	NA	34614912	34567213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_34567391_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
tx.13531	chr4	-	2273	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	-7	0	-7	0	multi-exon	FALSE	canonical	3	292	junction_6	92.190426792828	338	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	-12	True	NA	NA	False	NA	NA	NA	34614920	34570795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
tx.13532	chr4	-	2277	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	23	0	-8	0	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	335	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	-13	True	NA	NA	False	NA	NA	NA	34614921	34570795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
tx.13533	chr4	+	1861	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	5	2	1	2	multi-exon	TRUE	canonical	3	576	junction_1	51.5992441268264	446	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	-7	True	NA	NA	False	NA	NA	NA	34614961	34660165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
tx.13534	chr4	+	1959	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_9	178.38710715744	48	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	-2	True	NA	NA	False	NA	NA	NA	34614966	34660165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
tx.13535	chr4	+	1796	19	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	160.269410526829	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	0	True	NA	NA	False	NA	NA	NA	34614968	34660163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
tx.13536	chr4	-	2034	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	5	0	5	0	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	-16	True	NA	NA	False	NA	NA	NA	34687433	34663256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
tx.13537	chr4	-	2194	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	26	-1434	26	1434	multi-exon	FALSE	canonical	3	160	junction_2	5.5	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGCCCCAGAAAGACAAA	NA	False	NA	NA	False	NA	NA	NA	34778397	34767229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_34769148_34771257_34771415_34778278
tx.13538	chr4	-	10184	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	58.5062763727106	29	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAACTGAATAATGTTTT	-1	True	NA	NA	False	NA	NA	NA	34882942	34803118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34847810_34848033_34882757
tx.13539	chr4	-	9955	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	17	14	-13	-14	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTTCAACAACTGAAT	-2	True	NA	NA	False	NA	NA	NA	34882943	34803126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
tx.1354	chr10	+	1606	9	FSM	ENSMUSG00000053219.16	ENSMUST00000181645.8	1579	9	-27	0	-27	0	multi-exon	FALSE	canonical	3	14	junction_1	39.8708853676464	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	22034440	22059816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
tx.13540	chr4	-	2557	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	-5	3478	-5	-3478	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGATGCTGTCTTCTGTT	-37	True	NA	NA	False	NA	NA	NA	35157489	34952551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
tx.13541	chr4	-	1766	3	NIC	ENSMUSG00000073910.11	novel	6030	4	NA	NA	9	-3635	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGACATGAATGTATTCTT	-23	True	NA	NA	False	NA	NA	NA	35157475	34952708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_34954048_34985915_34986119_35157251
tx.13542	chr4	-	3383	12	NIC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	34.5947017392801	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	NA	False	NA	NA	False	NA	NA	NA	35225862	35191286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35221880_35222089_35225787
tx.13543	chr4	-	3166	11	FSM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	27	0	-19	0	multi-exon	FALSE	canonical	3	67	junction_8	10.8355895086516	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	-30	True	NA	NA	False	NA	NA	NA	35225853	35191286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
tx.13544	chr4	+	4657	20	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	298	0	298	0	intron_retention	TRUE	canonical	3	234	junction_5	34.8338358766825	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGGCTTTGGAGTTGA	-28	True	NA	NA	False	NA	NA	NA	40143378	40198338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244
tx.13545	chr4	+	3513	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	319	0	319	0	multi-exon	FALSE	canonical	3	234	junction_5	35.2306684580353	612	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGGCTTTGGAGTTGA	-7	True	NA	NA	False	NA	NA	NA	40143399	40198338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
tx.13546	chr4	-	3532	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	2	-1	2	1	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATATGGGTGTTTTTTT	-7	True	NA	NA	False	NA	NA	NA	40220598	40203775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
tx.13547	chr4	-	3791	2	ISM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	1235	2	1235	-2	3prime_fragment	FALSE	canonical	3	214	junction_1	0	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGTGCAACATTGA	1198	False	NA	NA	False	NA	NA	NA	40268615	40259602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_40263082_40268303
tx.13548	chr4	-	3840	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	11	5	11	-5	multi-exon	FALSE	canonical	3	214	junction_1	19	574	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTTTCTGTGCAACAT	-26	True	NA	NA	False	NA	NA	NA	40269839	40259605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_40263082_40268303_40268502_40269673
tx.13549	chr4	+	332	2	FSM	ENSMUSG00000028407.5	ENSMUST00000129758.3	1044	2	-4	716	-4	-2	multi-exon	FALSE	canonical	3	97	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGTGTGGCCTTTTGTG	-5	True	NA	NA	False	NA	NA	NA	40269574	40270224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_40269720_40270037
tx.1355	chr10	+	1307	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	-30	-3	-30	0	multi-exon	FALSE	canonical	3	64	junction_1	14.8286509463568	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	22049389	22059816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
tx.13550	chr4	-	572	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	16	71	4	3	multi-exon	FALSE	canonical	3	2502	junction_3	28.8251433455046	468	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTCCGTGTTACTGTC	6	True	NA	NA	False	NA	NA	NA	40279405	40270661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
tx.13551	chr4	-	1390	8	FSM	ENSMUSG00000028411.16	ENSMUST00000030119.10	5250	8	0	3860	0	0	multi-exon	FALSE	canonical	3	144	junction_6	8.59757915618919	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGATTGTGTAGTAT	1	True	NA	NA	False	NA	NA	NA	40703194	40686241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
tx.13552	chr4	+	2290	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	19	1067	19	-3	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	1857	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCAGTGTGTCACTGCA	12	True	NA	NA	False	NA	NA	NA	40722498	40733897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
tx.13553	chr4	+	2367	9	FSM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	2	3253	2	-4	multi-exon	FALSE	canonical	3	76	junction_1	940.162278213182	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCAGTGTGTCACTGC	-33	True	NA	NA	False	NA	NA	NA	40722923	40733896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
tx.13554	chr4	-	1792	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	52	574	12	-574	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	1040	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTGCTCATAAGGGGG	-15	True	NA	NA	False	NA	NA	NA	40757871	40737115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
tx.13555	chr4	-	3959	6	FSM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	24	0	24	0	multi-exon	FALSE	canonical	3	127	junction_2	16.0872620417522	306	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTCTTTTCTTTTTTG	4	True	NA	NA	False	NA	NA	NA	40853981	40804601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
tx.13556	chr4	-	1319	7	FSM	ENSMUSG00000028416.14	ENSMUST00000108089.8	1336	7	-2	19	-2	-16	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	800	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTGTGTTTTCTCAT	26	False	40948309	NA	False	NA	NA	NA	40948283	40936416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
tx.13557	chr4	-	1121	8	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	-12	-16	at_least_one_novel_splicesite	FALSE	canonical	3	161	junction_7	669.499477983671	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTGTGTTTTCTCAT	3	True	NA	NA	False	NA	NA	NA	40948306	40936416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721_40948051_40948271
tx.13558	chr4	+	1387	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	132	0	132	0	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTGTAGTATCGCTTT	-24	True	NA	NA	False	NA	NA	NA	40948538	40965303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
tx.13559	chr4	+	3020	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	66	1263	66	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	427	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-20	True	NA	NA	False	NA	NA	NA	40970971	41012608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
tx.1356	chr10	+	1302	7	NNC	ENSMUSG00000078452.11	novel	1271	7	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	16.5672032106274	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTATGTGCTCCAGAAG	NA	False	NA	NA	False	NA	NA	NA	22237780	22250035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_22237831_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
tx.13560	chr4	+	4527	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	66	1	66	-1	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	231	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTATTTTGTTTATTGA	-20	True	NA	NA	False	NA	NA	NA	40970971	41025992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
tx.13561	chr4	-	1419	4	ISM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	3382	0	-353	0	3prime_fragment	FALSE	canonical	3	1694	junction_1	167.39839372653	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	3381	False	NA	NA	False	NA	NA	NA	41094801	41092721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700
tx.13562	chr4	-	1765	6	FSM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	0	0	0	0	multi-exon	FALSE	canonical	3	1694	junction_1	130.458269189806	1614	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	NA	False	NA	NA	NA	41098183	41092721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
tx.13563	chr4	-	4440	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	159	0	159	0	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	507	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	8	True	NA	NA	False	NA	NA	NA	41124296	41114426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
tx.13564	chr4	+	2067	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	-231	1764	-231	580	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	586	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCACTTGGTTGCTATT	-2	True	NA	NA	False	NA	NA	NA	41135511	41191616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
tx.13565	chr4	-	4336	29	FSM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	33	-1	14	1	multi-exon	TRUE	canonical	3	748	junction_17	84.4073804080362	1369	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	2	True	NA	NA	False	NA	NA	NA	41275102	41194314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
tx.13566	chr4	-	3413	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	27	2	27	-2	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	943	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	1887	False	NA	NA	False	NA	NA	NA	41314862	41291301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
tx.13567	chr4	+	2656	7	FSM	ENSMUSG00000028437.15	ENSMUST00000072866.12	3456	7	40	760	-12	-1	multi-exon	FALSE	canonical	3	286	junction_5	24.6981780704569	427	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTGCCTTAACCT	-11	True	NA	NA	False	NA	NA	NA	41349035	41389765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
tx.13568	chr4	-	6900	14	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	-4	1111	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	9.0651814539423	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTTTCTATGCCTAG	-37	True	NA	NA	False	NA	NA	NA	41464891	41389633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
tx.13569	chr4	-	6761	13	FSM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	-50	-1118	-3	1118	multi-exon	TRUE	canonical	3	24	junction_12	8.49632273398321	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGCCTAGGTGTTAT	-36	True	NA	NA	False	NA	NA	NA	41464890	41389626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
tx.1357	chr10	-	2641	7	NNC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	43	2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	90.384364429548	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTATTCCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	22607217	22579775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587886_22607014
tx.13570	chr4	-	4366	3	ISM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	69758	-1119	9704	1119	3prime_fragment	FALSE	canonical	3	32	junction_1	1	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGCCTAGGTGTTATT	NA	False	NA	NA	False	NA	NA	NA	41395082	41389625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_41392253_41392877_41392972_41393437
tx.13571	chr4	+	852	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	-18	11	-18	-11	multi-exon	FALSE	canonical	3	137	junction_1	26.5	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTTTCAACCTGTGATG	NA	False	NA	NA	False	NA	NA	NA	41465132	41480915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_41465181_41477513_41477648_41480245
tx.13572	chr4	-	5542	2	NNC	ENSMUSG00000046312.5	novel	4173	2	NA	NA	-20	1169	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGTTTTGGAGTCAG	-12	True	NA	NA	False	NA	NA	NA	41503096	41494434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_41499871_41502990
tx.13573	chr4	-	4212	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-39	0	-39	0	multi-exon	FALSE	canonical	3	158	junction_1	0	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTTGTTTTCTTGCT	-31	True	NA	NA	False	NA	NA	NA	41503115	41495603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41499691_41502990
tx.13574	chr4	-	2103	6	FSM	ENSMUSG00000028439.15	ENSMUST00000108052.10	3357	6	1	1253	1	-1253	multi-exon	FALSE	canonical	0	0	junction_3	1.49666295470958	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGAGTCTTTTCATACC	-10	True	NA	NA	False	NA	NA	NA	41569536	41518943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41520399_41520911_41520967_41521611_41521693_41521866_41521970_41524365_41524415_41569176
tx.13575	chr4	-	1264	2	FSM	ENSMUSG00000028445.8	ENSMUST00000127306.2	1269	2	-64	69	-64	-69	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGAGATTTCTTTTTTTA	4	True	NA	NA	False	NA	NA	NA	41640388	41638212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41639002_41639913
tx.13576	chr4	-	846	2	FSM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	11	-1	11	1	multi-exon	FALSE	canonical	3	191	junction_1	0	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTGTTGTGTAAGT	-14	True	NA	NA	False	NA	NA	NA	41713523	41712031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41712815_41713460
tx.13577	chr4	-	819	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	5	149	-2	-149	multi-exon	FALSE	canonical	3	869	junction_5	34.1829229619443	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	-11	True	NA	NA	False	NA	NA	NA	41723165	41714946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
tx.13578	chr4	-	1572	4	NIC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	18	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	247.10906274131	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGTTTCCTTATGTGTC	-18	True	NA	NA	False	NA	NA	NA	41741341	41738495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_41739581_41740549_41740643_41740822_41740977_41741101
tx.13579	chr4	-	1619	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	18	3	18	-3	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	392	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGTTTCCTTATGTGTC	-18	True	NA	NA	False	NA	NA	NA	41741341	41738495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
tx.1358	chr10	-	2747	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	126	0	40	0	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGTATTCCCCCT	NA	False	NA	NA	False	NA	NA	NA	22607220	22579777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
tx.13580	chr4	+	1313	11	FSM	ENSMUSG00000036073.19	ENSMUST00000084695.12	1595	11	280	2	-250	-2	multi-exon	FALSE	canonical	2	236	junction_6	31.3438989278615	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCAGAGGAGTAGTGTG	15	False	NA	NA	False	NA	NA	NA	41755507	41758693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
tx.13581	chr4	+	1572	9	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-252	5	intron_retention	FALSE	canonical	2	43	junction_2	92.4836978877899	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTAGTGTGGACTCTT	13	False	NA	NA	False	NA	NA	NA	41755505	41758700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
tx.13582	chr4	+	1320	11	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-250	2	combination_of_known_junctions	FALSE	canonical	2	43	junction_2	83.1877394812481	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGGAGTAGTGTGGACT	15	False	NA	NA	False	NA	NA	NA	41755507	41758697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
tx.13583	chr4	-	2736	3	FSM	ENSMUSG00000073888.14	ENSMUST00000108035.8	731	3	-2010	5	-20	-5	multi-exon	FALSE	canonical	3	81	junction_1	9.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCCGTCTCTTTTA	613	False	NA	NA	False	NA	NA	NA	41773557	41769471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41769655_41769843_41769977_41771137
tx.13584	chr4	+	2394	4	FSM	ENSMUSG00000036052.15	ENSMUST00000098112.9	3093	4	6	693	6	0	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTGCGCAGAAGCAGTA	-20	True	NA	NA	False	NA	NA	NA	42949872	42958732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_42950005_42953140_42953386_42956525_42957128_42957317
tx.13585	chr4	-	3256	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	58	2	-16	-2	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	3067	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGCGTTCTGGCCACT	9799	False	NA	NA	False	NA	NA	NA	43000449	42979964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
tx.13586	chr4	-	2010	5	ISM	ENSMUSG00000028454.17	ENSMUST00000149333.8	2312	11	3708	2	-1666	-2	3prime_fragment	FALSE	canonical	3	131	junction_4	29.1322415890024	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	9070	False	NA	NA	False	NA	NA	NA	43021372	43017636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266
tx.13587	chr4	-	4062	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	26	-3	intron_retention	FALSE	canonical	3	30	junction_10	46.9541265492182	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	19	True	NA	NA	False	NA	NA	NA	43025793	43017637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
tx.13588	chr4	-	3588	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	7	-2	intron_retention	FALSE	canonical	3	84	junction_10	34.3634980757198	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	0	True	NA	NA	False	NA	NA	NA	43025812	43017636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
tx.13589	chr4	-	1329	4	ISM	ENSMUSG00000028454.17	ENSMUST00000149333.8	2312	11	4802	2	-572	-2	intron_retention	FALSE	canonical	3	191	junction_2	7.31816613336672	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	5534	False	NA	NA	False	NA	NA	NA	43020278	43017636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646
tx.1359	chr10	-	335	2	FSM	ENSMUSG00000061983.8	ENSMUST00000219783.2	488	2	175	-22	175	0	multi-exon	FALSE	canonical	3	3174	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	NA	False	NA	NA	NA	23661717	23661080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_23661172_23661473
tx.13590	chr4	-	4256	10	FSM	ENSMUSG00000028454.17	ENSMUST00000098109.9	4239	10	-20	3	-20	-3	multi-exon	FALSE	canonical	3	131	junction_4	26.4280995238864	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	0	True	NA	NA	False	NA	NA	NA	43025776	43017637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
tx.13591	chr4	-	1236	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	306	332	32	4	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	1683	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCTCATTGATTGG	-2	True	NA	NA	False	NA	NA	NA	43031404	43028021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
tx.13592	chr4	-	2239	7	ISM	ENSMUSG00000036002.13	ENSMUST00000107958.8	3280	9	4056	2	1069	-2	3prime_fragment	FALSE	canonical	3	38	junction_5	6.85565460040104	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCTCTACTTTTTTT	9974	False	NA	NA	False	NA	NA	NA	43036232	43032415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835
tx.13593	chr4	-	2998	9	NIC	ENSMUSG00000036002.13	novel	3060	10	NA	NA	-19	0	combination_of_known_splicesites	TRUE	canonical	2	2	junction_8	15.5724115023974	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	-15	True	NA	NA	False	NA	NA	NA	43040314	43032413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43040273
tx.13594	chr4	-	3061	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107956.8	3107	9	46	0	8	0	multi-exon	FALSE	canonical	3	38	junction_5	6.5	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	455	False	NA	NA	False	NA	NA	NA	43045751	43032413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
tx.13595	chr4	-	3306	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107958.8	3280	9	-28	2	-21	-2	multi-exon	FALSE	canonical	3	8	junction_8	13.7636296085008	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCTCTACTTTTTTT	-17	True	NA	NA	False	NA	NA	NA	43040316	43032415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43039965
tx.13596	chr4	+	6369	39	FSM	ENSMUSG00000028456.19	ENSMUST00000079978.13	6354	39	-13	-2	3	2	multi-exon	FALSE	canonical	3	15	junction_23	5.54732847284128	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGAGTCTGGAATTCTG	5	True	NA	NA	False	NA	NA	NA	43058955	43264873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
tx.13597	chr4	+	6370	39	NIC	ENSMUSG00000028456.19	novel	6354	39	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	3	7	junction_23	6.06086396664375	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGAGTCTGGAATTC	-1	True	NA	NA	False	NA	NA	NA	43058949	43264871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
tx.13598	chr4	+	5220	12	FSM	ENSMUSG00000035969.16	ENSMUST00000035645.12	5300	12	80	0	2	0	multi-exon	FALSE	canonical	3	25	junction_11	6.00550711451409	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	-1	True	NA	NA	False	NA	NA	NA	43382058	43427088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
tx.13599	chr4	+	5296	11	ISM	ENSMUSG00000035969.16	ENSMUST00000035645.12	5300	12	86	0	-5	0	intron_retention	FALSE	canonical	3	32	junction_5	4.72863616701476	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	5	True	NA	NA	False	NA	NA	NA	43382064	43427088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227
tx.1360	chr10	-	573	5	FSM	ENSMUSG00000061983.8	ENSMUST00000220070.2	494	5	-65	-14	25	0	multi-exon	FALSE	canonical	3	3174	junction_1	596.623153674076	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTTTGCTGGTATA	NA	False	NA	NA	False	NA	NA	NA	23663052	23661081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891
tx.13600	chr4	+	2790	10	FSM	ENSMUSG00000028458.13	ENSMUST00000060864.13	3947	10	1157	0	-225	0	multi-exon	FALSE	canonical	3	35	junction_4	6.61647774709307	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACTGTCATTAGCTCTC	11	False	NA	NA	False	NA	NA	NA	43443095	43448064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
tx.13601	chr4	+	812	6	FSM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	5	0	5	0	multi-exon	FALSE	canonical	3	301	junction_5	16.9162643630324	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-21	True	NA	NA	False	NA	NA	NA	43493366	43495921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
tx.13602	chr4	-	1625	9	FSM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	34	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	13.833270582187	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTGTCTAAATCACG	-14	True	NA	NA	False	NA	NA	NA	43499661	43496141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
tx.13603	chr4	-	1130	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	34	0	34	0	multi-exon	FALSE	canonical	3	13	junction_1	2.31503239718152	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	9803	False	NA	NA	False	NA	NA	NA	43523561	43514710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
tx.13604	chr4	-	5446	37	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	16433	-3	1658	3	3prime_fragment	FALSE	canonical	2	114	junction_34	41.0768250422979	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCTGGCTTTATGAGG	9936	False	NA	NA	False	NA	NA	NA	43545989	43531515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859
tx.13605	chr4	-	8406	57	FSM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	-12	-1	-12	1	multi-exon	FALSE	canonical	2	114	junction_34	45.4919257244893	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	81	False	NA	NA	False	NA	NA	NA	43562434	43531517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
tx.13606	chr4	+	1524	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	296	64	-185	-64	multi-exon	TRUE	canonical	3	77	junction_5	10.0615294563004	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTTGAATACTTCATC	-14	True	NA	NA	False	NA	NA	NA	43562627	43566996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
tx.13607	chr4	-	2062	13	ISM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	8159	0	-1072	0	3prime_fragment	FALSE	canonical	3	32	junction_8	9.28708781050335	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGGTGTGTCTGAG	8152	False	NA	NA	False	NA	NA	NA	43570714	43566927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671
tx.13608	chr4	-	3556	17	FSM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	-12	0	-12	0	multi-exon	FALSE	canonical	3	32	junction_8	9.51314879522022	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGGTGTGTCTGAG	-19	True	NA	NA	False	NA	NA	NA	43578885	43566927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
tx.13609	chr4	-	609	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	3	-2	3	0	multi-exon	FALSE	canonical	3	693	junction_3	25.1433390781734	153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATCCCTGTCTTAAA	-9	True	NA	NA	False	NA	NA	NA	43656463	43654226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
tx.1361	chr10	-	508	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	74	2	1	-1	multi-exon	FALSE	canonical	3	2594	junction_5	774.773670177298	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTGTTTGCTGGTAT	NA	False	NA	NA	False	NA	NA	NA	23663099	23661082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
tx.13610	chr4	+	5328	13	FSM	ENSMUSG00000078716.11	ENSMUST00000107866.9	5102	13	-230	4	-11	-4	multi-exon	FALSE	canonical	2	4	junction_9	2.419538523493	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCTACTCCTTCCCTT	-1	True	NA	NA	False	NA	NA	NA	43669275	43692664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43670035_43673899_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690026
tx.13611	chr4	+	4433	21	FSM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	-4	4	-4	-4	multi-exon	TRUE	canonical	3	46	junction_14	9.31812749429841	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGAGTTGTGTCTTTA	-16	True	NA	NA	False	NA	NA	NA	43875525	43944802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
tx.13612	chr4	+	2045	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	275	0	-16	0	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	275	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	161	False	NA	NA	False	NA	NA	NA	43957675	43979118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
tx.13613	chr4	+	1053	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	27	-1	-8	0	multi-exon	FALSE	canonical	3	1242	junction_1	75.1631558677521	526	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	-8	True	NA	NA	False	NA	NA	NA	44012669	44032846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
tx.13614	chr4	-	2822	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	98	0	56	0	multi-exon	FALSE	canonical	3	48	junction_9	6.79693659727954	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATATCTGGTCCCAGAA	338	False	44072721	NA	False	NA	NA	NA	44072680	44036825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
tx.13615	chr4	-	3072	3	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	106	20847	-48	2027	5prime_fragment	FALSE	canonical	3	64	junction_2	4	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTATTTTGTGTGTGTC	-37	True	NA	NA	False	NA	NA	NA	44072672	44057672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_44060228_44066754_44066961_44072361
tx.13616	chr4	-	5264	12	FSM	ENSMUSG00000035696.16	ENSMUST00000102934.9	5240	12	-19	-5	-19	0	multi-exon	FALSE	canonical	3	13	junction_10	22.7367253069995	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTGTTTCATGTAAGGCG	1297	False	44167998	NA	False	NA	NA	NA	44167970	44126209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167626
tx.13617	chr4	-	4771	10	ISM	ENSMUSG00000035696.16	ENSMUST00000107836.8	1694	12	6386	-3207	6386	2	3prime_fragment	FALSE	canonical	3	42	junction_6	11.5223882983853	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCGTGTTTCATGTAAG	1432	False	NA	NA	False	NA	NA	NA	44152557	44126212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359
tx.13618	chr4	-	5158	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	15.9874951133691	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	24	True	NA	NA	False	NA	NA	NA	44168019	44126214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
tx.13619	chr4	-	5330	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_10	21.5455331797568	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	13	True	NA	NA	False	NA	NA	NA	44168030	44126214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167465
tx.1362	chr10	+	2809	14	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.4205700752365	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTGTATTCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	23672862	23703866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681044_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
tx.13620	chr4	-	2767	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-131	758	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	26.04636679348	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCTGAGTGTTAGTTGT	-5	True	NA	NA	False	NA	NA	NA	44233920	44128661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44187448_44187520_44233542
tx.13621	chr4	+	2543	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	34	378	34	-378	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	632	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGACTATTTGGAGTGTG	-10	True	NA	NA	False	NA	NA	NA	44300909	44364297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
tx.13622	chr4	+	2488	9	FSM	ENSMUSG00000035649.18	ENSMUST00000107824.9	2503	9	20	-5	0	5	multi-exon	FALSE	canonical	3	29	junction_2	42.9270820694815	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGTGTTTATTGTT	10	True	NA	NA	False	NA	NA	NA	44756587	44932208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_44756693_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
tx.13623	chr4	+	4328	3	FSM	ENSMUSG00000035649.18	ENSMUST00000147272.8	4251	3	-84	7	-84	5	multi-exon	FALSE	canonical	3	133	junction_2	10.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGTGTTTATTGTT	NA	False	NA	NA	False	NA	NA	NA	44923033	44932208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_44926071_44929117_44929236_44931035
tx.13624	chr4	+	1244	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	3	33	3	-33	multi-exon	FALSE	canonical	3	277	junction_3	33.5326333591622	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTATGACTTGGGG	-28	True	NA	NA	False	NA	NA	NA	44981397	44990701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
tx.13625	chr4	-	5336	2	FSM	ENSMUSG00000049657.10	ENSMUST00000107817.3	3867	2	268	-1737	1	1	multi-exon	FALSE	canonical	3	12	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACACGGTCTCCTTTGCT	-18	True	NA	NA	False	NA	NA	NA	45012144	44991243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_44995387_45010951
tx.13626	chr4	-	4467	2	FSM	ENSMUSG00000049657.10	ENSMUST00000180217.2	4708	2	244	-3	-23	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACGGTCTCCTTTGCTTC	138	False	NA	NA	False	NA	NA	NA	45012168	44991241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_44995387_45011846
tx.13627	chr4	-	4333	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	-20	3	-2	0	multi-exon	FALSE	canonical	3	11	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACACGGTCTCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	45012414	44991244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_44995387_45012223
tx.13628	chr4	+	2928	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	57	1	-22	-1	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATGCTGACGACAATA	-8	True	NA	NA	False	NA	NA	NA	45018639	45033691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
tx.13629	chr4	-	3645	9	ISM	ENSMUSG00000048232.13	ENSMUST00000052236.13	4635	11	25737	1	-249	0	3prime_fragment	FALSE	canonical	3	26	junction_8	4.89259644769523	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTCTGGGGTCATAAT	NA	False	NA	NA	False	NA	NA	NA	45058867	45034247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_45036083_45040525_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328
tx.1363	chr10	+	2667	13	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	23.1336695460678	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	NA	False	NA	NA	NA	23672895	23703865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
tx.13630	chr4	-	4630	11	FSM	ENSMUSG00000048232.13	ENSMUST00000052236.13	4635	11	2	3	2	-2	multi-exon	FALSE	canonical	3	26	junction_8	5.25737577123797	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGCTTCTGGGGTCATA	-32	True	NA	NA	False	NA	NA	NA	45084602	45034249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_45036083_45040525_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328_45059151_45061939_45062531_45084489
tx.13631	chr4	-	633	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	5	1	-1	-1	multi-exon	FALSE	canonical	3	2176	junction_1	0	449	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTTTTGTGTTTTTAA	-11	True	NA	NA	False	NA	NA	NA	45108109	45105208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_45105645_45107912
tx.13632	chr4	+	1387	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	31	646	3	343	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGCCGATTTCCACC	-5	True	NA	NA	False	NA	NA	NA	45297157	45315485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
tx.13633	chr4	-	1051	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	10	16	10	-16	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	187	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTGGTAGTGTCTATA	-12	True	NA	NA	False	NA	NA	NA	45320619	45316628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
tx.13634	chr4	+	7296	8	FSM	ENSMUSG00000035572.17	ENSMUST00000107798.4	2421	8	-114	-4761	-33	-42	multi-exon	FALSE	canonical	3	9	junction_3	29.3250606763817	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATAAACCTTCACTACG	-31	True	NA	NA	False	NA	NA	NA	45342067	45379717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_45342728_45348105_45348220_45349536_45349592_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
tx.13635	chr4	+	7025	6	NIC	ENSMUSG00000035572.17	novel	7250	7	NA	NA	-3	-30	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	28.039971469315	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTACGTGTGGCCTCAAG	-1	True	NA	NA	False	NA	NA	NA	45342097	45379729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_45342728_45348105_45348220_45370305_45370509_45372663_45372775_45372923_45373070_45373908
tx.13636	chr4	+	7224	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	-11	37	-11	-37	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTCACTACGTGTGG	-9	True	NA	NA	False	NA	NA	NA	45342089	45379722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
tx.13637	chr4	-	1932	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	2	2499	1	819	multi-exon	FALSE	canonical	3	68	junction_2	5.5	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	-15	True	NA	NA	False	NA	NA	NA	45408759	45398421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_45400180_45404726_45404836_45408694
tx.13638	chr4	-	2731	6	FSM	ENSMUSG00000044813.16	ENSMUST00000061986.12	2244	6	-487	0	-487	0	multi-exon	FALSE	canonical	3	103	junction_2	2.71293199325011	247	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTAGTCGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	45530817	45423277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45489054_45489176_45529561
tx.13639	chr4	+	2242	2	FSM	ENSMUSG00000035561.6	ENSMUST00000044384.5	2298	2	56	0	-43	0	multi-exon	FALSE	canonical	3	42	junction_1	0	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATCACTGTTTTCCTT	-27	True	NA	NA	False	NA	NA	NA	45799077	45804604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_45799170_45802454
tx.1364	chr10	+	2823	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	13	1	13	-1	multi-exon	FALSE	canonical	3	72	junction_6	14.8148334428987	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	NA	False	NA	NA	NA	23672896	23703865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
tx.13640	chr4	+	3652	17	FSM	ENSMUSG00000035517.18	ENSMUST00000102929.2	3716	17	64	0	64	0	multi-exon	FALSE	canonical	0	0	junction_9	2.54644359843292	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGTCTTAGTTTGCTT	-10	True	NA	NA	False	NA	NA	NA	45972296	46034761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023506_46025656_46026160_46029646_46029808_46034295
tx.13641	chr4	-	3620	10	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	52.704627669473	59	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	-24	True	NA	NA	False	NA	NA	NA	46138455	46114745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
tx.13642	chr4	-	3706	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	20	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	21.9291789378647	329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	-24	True	NA	NA	False	NA	NA	NA	46138455	46114745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
tx.13643	chr4	-	3833	10	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	59.1553719005414	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	4	True	NA	NA	False	NA	NA	NA	46138694	46114745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138491
tx.13644	chr4	+	3038	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-28	0	-28	0	multi-exon	TRUE	canonical	3	296	junction_19	36.3529529761015	612	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	-1	True	NA	NA	False	NA	NA	NA	46138584	46172403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
tx.13645	chr4	-	959	6	FSM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	75	junction_2	5.6	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGATGCAGTCTTCACAGA	0	True	NA	NA	False	NA	NA	NA	46196315	46175221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_46175416_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
tx.13646	chr4	-	3149	6	NIC	ENSMUSG00000028331.13	novel	2127	6	NA	NA	-1	998	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	47.0829056027769	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCGTGTCACCTGTGAA	-15	True	NA	NA	False	NA	NA	NA	46389438	46375506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_46377249_46379984_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
tx.13647	chr4	-	4651	3	ISM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	16	-249	2	249	intron_retention	FALSE	canonical	3	116	junction_1	4	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGCTCAAGATTCATT	2	True	NA	NA	False	NA	NA	NA	46389421	46379614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_46380311_46382058_46382686_46386093
tx.13648	chr4	-	1517	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	2	8	2	-8	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTCTCTGTCTGAG	-12	True	NA	NA	False	NA	NA	NA	46389435	46379871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
tx.13649	chr4	+	1689	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	23	4	23	-4	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	5042	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCTAGTTGTACTCTC	-29	True	NA	NA	False	NA	NA	NA	46450924	46472653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
tx.1365	chr10	+	2185	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	-11	1261	-1	0	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	240	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCCCAAGAACTCT	NA	False	NA	NA	False	NA	NA	NA	24025213	24064859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
tx.13650	chr4	+	1163	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	58	958	-13	-958	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	569	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTGCTGTCCAGT	-10	True	NA	NA	False	NA	NA	NA	46489305	46502674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
tx.13651	chr4	-	4324	13	FSM	ENSMUSG00000039813.15	ENSMUST00000084621.12	4315	13	-9	0	-9	0	multi-exon	TRUE	canonical	2	8	junction_12	4.63381292481928	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTGGGCTGCCTGA	-23	True	NA	NA	False	NA	NA	NA	46650218	46604389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46646116_46646259_46649668
tx.13652	chr4	-	3833	16	NIC	ENSMUSG00000066191.13	novel	3980	17	NA	NA	-46	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	1.91369334592098	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGAGTTTGTGCTCTTT	-26	True	NA	NA	False	NA	NA	NA	47057352	47015687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_47016817_47017492_47017620_47023743_47023861_47025685_47025754_47027100_47027285_47030663_47030852_47033115_47033270_47035715_47035920_47038913_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47049068_47049572_47056948
tx.13653	chr4	+	2257	10	FSM	ENSMUSG00000039774.13	ENSMUST00000045041.12	2288	10	9	22	-5	5	multi-exon	FALSE	canonical	3	17	junction_3	5.3748384988657	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCCACAGCCAAAATTC	-24	True	NA	NA	False	NA	NA	NA	47091917	47123048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_47092329_47104099_47104270_47108390_47108581_47111455_47111642_47112321_47112440_47113727_47113905_47117903_47118036_47119514_47119629_47120361_47120509_47122436
tx.13654	chr4	+	5737	9	FSM	ENSMUSG00000007613.16	ENSMUST00000044234.14	2861	9	-85	-2791	0	-7	multi-exon	FALSE	canonical	3	99	junction_2	41.6435769357052	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATGGCAACATTCTT	0	True	NA	NA	False	NA	NA	NA	47353221	47414924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
tx.13655	chr4	+	5748	9	FSM	ENSMUSG00000007613.16	ENSMUST00000007757.15	5756	9	1	7	1	-7	multi-exon	FALSE	canonical	3	114	junction_2	37.2623721064561	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATGGCAACATTCTT	1	True	NA	NA	False	NA	NA	NA	47353222	47414924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
tx.13656	chr4	-	3023	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	-3	1	-3	-1	multi-exon	FALSE	canonical	3	118	junction_1	0	283	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCCAGTTTATGGTTGC	-20	True	NA	NA	False	NA	NA	NA	47474336	47469833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_47472459_47473938
tx.13657	chr4	+	557	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	5	2	5	-2	multi-exon	FALSE	canonical	3	2329	junction_2	60.4225859169308	387	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTTGCCTGTGCTTTA	-17	True	NA	NA	False	NA	NA	NA	47474662	47483240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
tx.13658	chr4	+	5192	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	-10	588	1	8	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGATCTAAGAGAATGA	-5	True	NA	NA	False	NA	NA	NA	48124915	48185919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
tx.13659	chr4	+	2476	8	NIC	ENSMUSG00000061455.14	novel	5770	8	NA	NA	2	885	intron_retention	FALSE	canonical	2	7	junction_1	13.490737563232	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTATTTATTTCTTA	16	True	NA	NA	False	NA	NA	NA	48124936	48183116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_48125067_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
tx.1366	chr10	+	2340	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	60	-2	60	2	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTGGCTGTTCATTC	NA	False	NA	NA	False	NA	NA	NA	24471399	24474578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
tx.13660	chr4	-	2528	11	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-24	-4	combination_of_known_splicesites	TRUE	canonical	3	16	junction_8	206.167019670945	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTATCAGCTTCCAGTT	-4	True	NA	NA	False	NA	NA	NA	48279582	48193326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48241295_48241336_48243476_48243550_48279383
tx.13661	chr4	-	2638	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-25	11	-25	-11	multi-exon	FALSE	canonical	3	625	junction_9	43.7020339182862	473	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATAACTATCAGCT	-5	True	NA	NA	False	NA	NA	NA	48279583	48193333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
tx.13662	chr4	-	3309	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_14	171.623282279556	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	10	True	NA	NA	False	NA	NA	NA	48473420	48430857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
tx.13663	chr4	-	3081	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	21	0	-16	0	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	1295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	-8	True	NA	NA	False	NA	NA	NA	48473438	48430857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
tx.13664	chr4	-	2612	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	-12	True	NA	NA	False	NA	NA	NA	48473442	48430857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
tx.13665	chr4	+	494	2	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTGTCTTGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	48513813	48519021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_48514080_48518793
tx.13666	chr4	+	1689	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	30	-341	30	0	multi-exon	FALSE	canonical	3	126	junction_1	89	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	32	False	NA	NA	False	NA	NA	NA	48540108	48561918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_48540272_48552379_48552831_48560843
tx.13667	chr4	+	1837	4	NIC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-165	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	134.127634073752	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	174	False	NA	NA	False	NA	NA	NA	48540333	48561918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_48540569_48549921_48549998_48552379_48552831_48560843
tx.13668	chr4	+	1675	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	-77	-1	-77	1	multi-exon	FALSE	canonical	3	153	junction_1	75.5	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTACACTGTGTATGTTT	-39	True	NA	NA	False	NA	NA	NA	48540421	48561920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_48540569_48552379_48552831_48560843
tx.13669	chr4	+	2494	10	FSM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	-33	0	-33	0	multi-exon	FALSE	canonical	3	169	junction_4	114.355952842942	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	-21	True	NA	NA	False	NA	NA	NA	48585140	48663131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
tx.1367	chr10	-	2678	16	ISM	ENSMUSG00000019989.9	ENSMUST00000020169.9	4253	25	30184	678	-8270	407	3prime_fragment	FALSE	canonical	1	2	junction_4	3.29983164553722	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCTTGACATGAATCTC	NA	False	NA	NA	False	NA	NA	NA	24681939	24648981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_24649971_24650680_24650838_24652658_24652792_24653791_24653870_24654590_24654724_24660687_24660843_24662356_24662412_24663616_24663796_24667886_24667975_24669482_24669550_24671583_24671712_24673656_24673689_24674049_24674179_24675055_24675165_24680296_24680370_24681766
tx.13670	chr4	+	2497	10	FSM	ENSMUSG00000028347.15	ENSMUST00000130834.8	1426	10	-410	-661	-33	0	multi-exon	FALSE	canonical	3	335	junction_4	69.1178989163971	579	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	-21	True	NA	NA	False	NA	NA	NA	48585140	48663131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
tx.13671	chr4	-	2097	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	16	1	16	-1	multi-exon	FALSE	canonical	3	1281	junction_1	0	755	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTTTTAAAGTGTTAT	-15	True	NA	NA	False	NA	NA	NA	49521077	49512596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_49514578_49520961
tx.13672	chr4	+	3116	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	27	-178	27	178	multi-exon	FALSE	canonical	3	41	junction_2	6.5	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTTTTGTTTTGTGCAT	-12	True	NA	NA	False	NA	NA	NA	49521243	49531695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_49521596_49522397_49522483_49529016
tx.13673	chr4	+	4167	21	FSM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	-14	1	-8	0	multi-exon	FALSE	canonical	3	46	junction_1	16.7996279720713	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	-27	True	NA	NA	False	NA	NA	NA	49632051	49656886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
tx.13674	chr4	+	5327	25	FSM	ENSMUSG00000028312.20	ENSMUST00000117280.8	5328	25	1	0	1	0	multi-exon	FALSE	canonical	3	100	junction_1	79.8595990195014	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-18	True	NA	NA	False	NA	NA	NA	52439243	52488260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
tx.13675	chr4	+	5396	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	8	0	-1	0	multi-exon	FALSE	canonical	3	347	junction_1	46.9361083164006	664	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-11	True	NA	NA	False	NA	NA	NA	52439250	52488260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
tx.13676	chr4	+	1964	5	NIC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	31	654	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	242.299788485256	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTTTTTTTAAACAT	10	False	NA	NA	False	NA	NA	NA	53011910	53022714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_53012048_53017048_53017208_53020181_53020332_53021110_53021198_53021283
tx.13677	chr4	+	1505	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	46	1	-24	-1	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	403	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATCAAGTGAGTCT	-22	True	NA	NA	False	NA	NA	NA	53011925	53022059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
tx.13678	chr4	-	5237	16	ISM	ENSMUSG00000015243.5	ENSMUST00000030010.4	10262	50	108882	11	-10087	-11	3prime_fragment	FALSE	canonical	3	18	junction_11	8.28224338905562	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGTCTACACAAAGTT	8201	False	NA	NA	False	NA	NA	NA	53051013	53030797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934
tx.13679	chr4	-	10249	50	FSM	ENSMUSG00000015243.5	ENSMUST00000030010.4	10262	50	2	11	2	-11	multi-exon	FALSE	canonical	2	9	junction_41	9.14791223225713	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGTCTACACAAAGTT	-1	True	NA	NA	False	NA	NA	NA	53159893	53030797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53159675
tx.1368	chr10	+	4836	29	FSM	ENSMUSG00000019984.17	ENSMUST00000020159.15	4798	29	-41	3	20	-3	multi-exon	TRUE	canonical	2	39	junction_7	9.84419439392103	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	24745903	24789355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
tx.13680	chr4	+	4620	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-256	18	2	-18	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	772	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	-31	True	NA	NA	False	NA	NA	NA	53440414	53567800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
tx.13681	chr4	+	7488	12	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7.98655895658087	4	2	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTCCATTTTTTAT	18	True	NA	NA	False	NA	NA	NA	53631444	53707008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_53631613_53646986_53647083_53647669_53647802_53649791_53649910_53659509_53659635_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
tx.13682	chr4	+	7100	8	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25567	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	4.94871659305393	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTCCATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	53668846	53707008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_53669098_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
tx.13683	chr4	+	7133	8	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25746	-1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	5.67845911838623	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTCCATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	53669025	53707008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_53669310_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
tx.13684	chr4	+	5926	10	FSM	ENSMUSG00000028414.18	ENSMUST00000128667.8	6080	10	152	2	-13	-2	multi-exon	FALSE	canonical	3	30	junction_1	6.81501610008696	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTTGTGTTTGTTTTT	-21	True	NA	NA	False	NA	NA	NA	53714149	53765783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
tx.13685	chr4	+	6051	11	ISM	ENSMUSG00000028414.18	ENSMUST00000222290.2	3123	12	0	12107	0	-2	5prime_fragment	FALSE	canonical	2	9	junction_2	14.4377976159801	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTTGTGTTTGTTTTT	-8	True	NA	NA	False	NA	NA	NA	53714162	53765783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_53714196_53720006_53720210_53724604_53724743_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
tx.13686	chr4	+	2874	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	-14	2	-14	-2	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGGTATTCTTCT	-30	True	NA	NA	False	NA	NA	NA	53826030	53862017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
tx.13687	chr4	+	2731	5	NIC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	42.4345083628879	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	-42	True	NA	NA	False	NA	NA	NA	53826018	53862019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_53826221_53848865_53849051_53850473_53850562_53854311_53854430_53859881
tx.13688	chr4	+	10265	13	NIC	ENSMUSG00000060206.12	novel	4823	11	NA	NA	-12	-9	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	9.10585891976516	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGTATTTATGTGCAT	11	False	NA	NA	False	NA	NA	NA	54945035	55083554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_54945102_55007532_55007783_55008255_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
tx.13689	chr4	+	4738	13	NNC	ENSMUSG00000060206.12	novel	363	3	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.3949774196751	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTATGTGCATCTGTT	9	True	NA	NA	False	NA	NA	NA	54945033	55083559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_54945102_55007532_55007783_55008255_55008316_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
tx.1369	chr10	-	2308	8	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_5	10.3430939199417	73	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	25172980	25044987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
tx.13690	chr4	+	7267	11	ISM	ENSMUSG00000060206.12	ENSMUST00000098070.10	10465	13	62971	0	-419	0	3prime_fragment	FALSE	canonical	2	11	junction_1	7.07177488329486	31	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCATCTGTTAAGT	1653	False	NA	NA	False	NA	NA	NA	55010946	55083563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
tx.13691	chr4	+	3024	2	ISM	ENSMUSG00000060206.12	ENSMUST00000079605.5	4684	11	67782	-2233	67782	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCATCTGTTAAGT	NA	False	NA	NA	False	NA	NA	NA	55079261	55083563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_55079388_55080665
tx.13692	chr4	+	2781	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	3	1026	3	-1026	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	1630	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGGCTTTTATTTGGA	-15	True	NA	NA	False	NA	NA	NA	55350045	55391211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
tx.13693	chr4	-	2238	3	ISM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	1553	0	857	0	3prime_fragment	FALSE	canonical	3	1140	junction_2	58	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	2413	False	NA	NA	False	NA	NA	NA	55530913	55527142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_55528301_55529717_55529883_55529998
tx.13694	chr4	-	3041	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	2352	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	-3	True	NA	NA	False	NA	NA	NA	55532478	55527142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
tx.13695	chr4	-	5036	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	27	1097	27	235	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	496	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGTTATGTGCTACTA	-11	True	NA	NA	False	NA	NA	NA	56802304	56750776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
tx.13696	chr4	-	4918	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	32	236	combination_of_known_splicesites	TRUE	canonical	3	18	junction_5	63.153586677275	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTTATGTGCTACTAG	-6	True	NA	NA	False	NA	NA	NA	56802299	56750775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
tx.13697	chr4	+	4280	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	-5	0	-1	0	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	-5	True	NA	NA	False	NA	NA	NA	56802343	56809601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
tx.13698	chr4	+	4361	6	FSM	ENSMUSG00000038827.12	ENSMUST00000131520.8	4360	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	7	junction_1	52.8189359983709	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	2	True	NA	NA	False	NA	NA	NA	56802350	56809601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_56802727_56803507_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
tx.13699	chr4	-	3671	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-9	2	-9	-2	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	303	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATACCGACTGGCTTA	-26	True	NA	NA	False	NA	NA	NA	56865197	56810936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
tx.1370	chr10	-	3155	8	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	36.4848305072513	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	25172981	25044987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
tx.13700	chr4	-	3380	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATACCGACTGGCTTA	-7	True	NA	NA	False	NA	NA	NA	56846083	56810936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
tx.13701	chr4	-	6055	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-5	3059	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	65	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCAATTTCTTCATTTC	0	True	NA	NA	False	NA	NA	NA	56947429	56876816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
tx.13702	chr4	-	4292	25	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-272	1097	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	61.2422188935052	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTCTTGGATTATTCC	-4	True	NA	NA	False	NA	NA	NA	57143709	56994580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
tx.13703	chr4	-	6886	25	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-259	-11	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	62.0543976192573	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATGAAATTAAATGCT	9	True	NA	NA	False	NA	NA	NA	57143696	56991982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019968_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
tx.13704	chr4	-	3648	20	ISM	ENSMUSG00000028434.13	ENSMUST00000095076.10	6746	26	-272	31304	-272	-27598	5prime_fragment	FALSE	canonical	3	30	junction_2	53.6043782062705	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTCCATTTTCGTGTG	-4	True	NA	NA	False	NA	NA	NA	57143709	57023275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
tx.13705	chr4	-	3512	16	FSM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	-275	10	-275	-10	multi-exon	FALSE	canonical	3	116	junction_1	13.208414826247	267	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTAACAGTTTTTAC	-7	True	NA	NA	False	NA	NA	NA	57143712	57061735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
tx.13706	chr4	-	6289	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	7.95044652834041	75	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACACTGTTCTTGTCTGT	8	True	NA	NA	False	NA	NA	NA	57300375	57190849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300280
tx.13707	chr4	-	6242	25	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-22	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	12.9050350854058	7	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTTCTTGTCTGTCA	-14	True	NA	NA	False	NA	NA	NA	57300397	57190847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258024_57264861_57264909_57264982_57265091_57270022_57270178_57300280
tx.13708	chr4	+	4829	4	NIC	ENSMUSG00000038729.25	novel	7211	4	NA	NA	-37	-2120	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.29983164553722	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTTATGTTATTA	975	False	NA	NA	False	NA	NA	NA	57782142	57894862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_57782323_57854561_57857038_57883023_57883203_57892868
tx.13709	chr4	+	4544	3	FSM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	-18	2124	-18	-2124	multi-exon	FALSE	canonical	3	18	junction_2	1	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTGTTTTTATGTT	0	True	NA	NA	False	NA	NA	NA	57845228	57894858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_57845307_57854561_57857038_57892868
tx.1371	chr10	+	4149	18	FSM	ENSMUSG00000019978.17	ENSMUST00000218903.2	4115	18	-32	-2	26	0	multi-exon	FALSE	canonical	3	273	junction_1	40.1674694938122	337	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	25235721	25399413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
tx.13710	chr4	+	4744	4	FSM	ENSMUSG00000038729.25	ENSMUST00000107598.9	6830	4	-36	2122	-35	-2120	multi-exon	FALSE	canonical	3	16	junction_3	1.69967317119759	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTTATGTTATTA	NA	False	NA	NA	False	NA	NA	NA	57845211	57894862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_57845307_57854561_57857038_57883023_57883203_57892868
tx.13711	chr4	+	6840	4	NNC	ENSMUSG00000038729.25	novel	6830	4	NA	NA	-1	-21	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	6.94422221866655	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTCAACGTGTATAGT	-7	True	NA	NA	False	NA	NA	NA	57845245	57896961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_57845338_57854561_57857038_57883023_57883203_57892868
tx.13712	chr4	+	2848	3	FSM	ENSMUSG00000038729.25	ENSMUST00000098064.9	7172	3	2200	2124	2200	-2124	multi-exon	FALSE	canonical	3	16	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTGTTTTTATGTT	1612	False	NA	NA	False	NA	NA	NA	57856358	57894858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_57857038_57883023_57883203_57892868
tx.13713	chr4	+	6361	2	FSM	ENSMUSG00000038729.25	ENSMUST00000102902.4	6993	2	583	49	583	-49	multi-exon	FALSE	canonical	3	18	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATGCAACTATACAGTTAT	-5	True	NA	NA	False	NA	NA	NA	57854741	57896933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_57857038_57892868
tx.13714	chr4	-	579	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	88	384	88	-384	multi-exon	TRUE	canonical	3	4612	junction_4	90.890043459116	420	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	11	True	NA	NA	False	NA	NA	NA	57956323	57943756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
tx.13715	chr4	-	3426	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	86	0	40	0	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	-2	True	NA	NA	False	NA	NA	NA	58553271	58435254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
tx.13716	chr4	-	3548	5	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	56	-1	combination_of_known_splicesites	FALSE	canonical	2	16	junction_4	115.15288750179	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATGTGTGGTTCTGGTCT	503	False	58553269	NA	False	NA	NA	NA	58553255	58435255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553133
tx.13717	chr4	-	3338	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	116	-3	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGATGTGTGGTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	58553782	58435257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
tx.13718	chr4	-	3468	5	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	123	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	115.15288750179	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	NA	False	NA	NA	False	NA	NA	NA	58553775	58435259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553729
tx.13719	chr4	-	5993	50	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-175	-1119	combination_of_known_junctions	TRUE	canonical	3	16	junction_49	33.7965099031343	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-5	True	NA	NA	False	NA	NA	NA	58912105	58800029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58911868
tx.1372	chr10	+	2153	6	ISM	ENSMUSG00000019978.17	ENSMUST00000092645.7	4280	20	93498	4	-125	0	3prime_fragment	FALSE	canonical	3	365	junction_1	14.319217855735	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	177	False	NA	NA	False	NA	NA	NA	25377763	25399413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
tx.13720	chr4	-	5943	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-229	-1119	combination_of_known_junctions	FALSE	canonical	3	51	junction_48	26.1772719352537	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	3320	False	NA	NA	False	NA	NA	NA	58912159	58800029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
tx.13721	chr4	-	5926	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	0	1119	0	-1119	multi-exon	FALSE	canonical	3	80	junction_48	23.9024347899725	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-22	True	NA	NA	False	NA	NA	NA	58912749	58800029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
tx.13722	chr4	-	6030	50	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	0	-1119	combination_of_known_junctions	FALSE	canonical	3	17	junction_49	33.7119878645701	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-22	True	NA	NA	False	NA	NA	NA	58912749	58800029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
tx.13723	chr4	-	1178	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	38	1080	38	-1080	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	192	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGTGATAGAGAATGAA	-4	True	NA	NA	False	NA	NA	NA	58987081	58966518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
tx.13724	chr4	+	1702	5	FSM	ENSMUSG00000070972.14	ENSMUST00000153467.3	2393	5	-57	748	-36	309	multi-exon	FALSE	canonical	2	4	junction_1	45.2189119727576	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAAGTGTTTCTTCTT	-33	True	NA	NA	False	NA	NA	NA	59003135	59022992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_59003558_59013631_59013856_59017669_59017823_59020058_59020530_59022560
tx.13725	chr4	+	1474	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	-33	2582	-33	308	multi-exon	FALSE	canonical	3	77	junction_1	16.2685791225499	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGAAGTGTTTCTTCT	-30	True	NA	NA	False	NA	NA	NA	59003138	59022991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
tx.13726	chr4	+	1083	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	103	6	103	-6	multi-exon	FALSE	canonical	3	257	junction_2	16.5	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGTAGTTTGTGTTTG	-21	True	NA	NA	False	NA	NA	NA	59035190	59041897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_59035319_59039226_59039359_59041074
tx.13727	chr4	-	5027	12	NNC	ENSMUSG00000038598.10	novel	4664	28	NA	NA	-6772	2417	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	5.11681719253465	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTCTGTGGTGACTGA	NA	False	NA	NA	False	NA	NA	NA	59117885	59078714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879_59086982_59092350_59092502_59093848_59093934_59094129_59094284_59099251_59099431_59109585_59109668_59111092_59111205_59113897_59113978_59117784
tx.13728	chr4	+	3809	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	201	2	-100	-2	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	498	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAGAGTAATGGACTGGC	-40	True	NA	NA	False	NA	NA	NA	59189457	59222831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
tx.13729	chr4	-	3425	16	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	241	485	combination_of_known_splicesites	FALSE	canonical	3	11	junction_15	21.7220829776725	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCAACTCCAAGGTTGT	-7	True	NA	NA	False	NA	NA	NA	59438392	59314197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
tx.1373	chr10	-	4752	22	FSM	ENSMUSG00000039089.16	ENSMUST00000040219.13	4572	22	-177	-3	-177	0	multi-exon	TRUE	canonical	2	5	junction_21	7.32838422979453	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTATATATGTATGA	NA	False	NA	NA	False	NA	NA	NA	26250129	26150365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26249696
tx.13730	chr4	-	3547	17	FSM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	231	-483	231	483	multi-exon	FALSE	canonical	3	51	junction_3	14.4566971936885	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCTCAACTCCAAGGTT	-17	True	NA	NA	False	NA	NA	NA	59438402	59314199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
tx.13731	chr4	-	3214	15	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	259	481	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	22.6805679661094	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTCAACTCCAAGG	11	True	NA	NA	False	NA	NA	NA	59438374	59314201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
tx.13732	chr4	-	2764	10	ISM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	241	49833	241	-32559	5prime_fragment	FALSE	canonical	3	63	junction_2	13.2664991614216	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTCTTGGATTTTTTA	-7	True	NA	NA	False	NA	NA	NA	59438392	59364515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
tx.13733	chr4	-	4534	6	ISM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	262	72305	262	-55031	5prime_fragment	FALSE	canonical	3	74	junction_4	13.8506317545446	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAGTGTGTGACTTAC	14	True	NA	NA	False	NA	NA	NA	59438371	59386987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
tx.13734	chr4	-	6814	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	31	10	-19	-10	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTAAGGTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	59549333	59471877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
tx.13735	chr4	-	6844	15	FSM	ENSMUSG00000028382.16	ENSMUST00000174586.8	6640	15	-30	-174	-11	-6	multi-exon	FALSE	canonical	3	35	junction_14	45.4889535817124	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAAGGTTTTTCTGTGTT	-6	False	NA	NA	False	NA	NA	NA	59549325	59471873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59546148_59546183_59549147
tx.13736	chr4	+	2689	12	NNC	ENSMUSG00000028383.18	novel	2626	12	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	37.2174756783392	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTTCCATTCTATGT	10	False	NA	NA	False	NA	NA	NA	59581572	59618677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59613403_59613504_59617634
tx.13737	chr4	+	2574	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	36	1	36	0	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTATGTGCCTTTTATTT	4	True	NA	NA	False	NA	NA	NA	59581598	59618688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
tx.13738	chr4	+	3719	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	0	7137	0	1263	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTCTTTAAATTAGTT	-11	True	NA	NA	False	NA	NA	NA	59626210	59754302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
tx.13739	chr4	+	5151	3	FSM	ENSMUSG00000045071.15	ENSMUST00000052420.7	3205	3	-31	-1915	1	1915	multi-exon	FALSE	canonical	2	5	junction_2	48.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATATCTTAAATGTTCCC	-10	True	NA	NA	False	NA	NA	NA	59626211	59723316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_59626492_59690143_59691339_59719640
tx.1374	chr10	-	4424	22	FSM	ENSMUSG00000039089.16	ENSMUST00000174766.2	3411	22	-31	-982	-31	1	multi-exon	FALSE	canonical	2	4	junction_21	7.47998084079664	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTTTTATATATGTAT	NA	False	NA	NA	False	NA	NA	NA	26251212	26150367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251105
tx.13740	chr4	-	3227	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	5	5	5	-5	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAGTTTACTGCATAT	-23	True	NA	NA	False	NA	NA	NA	59783861	59769641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
tx.13741	chr4	-	3146	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-53	-1655	5	-5	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAGTTTACTGCATAT	-23	True	NA	NA	False	NA	NA	NA	59783861	59769641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
tx.13742	chr4	-	1665	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-17	6	-6	-6	multi-exon	FALSE	canonical	3	236	junction_2	17	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATCCCCTTATATAAT	-17	True	NA	NA	False	NA	NA	NA	59783855	59774093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_59775550_59782253_59782335_59783727
tx.13743	chr4	+	7308	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	1	5	1	-5	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGGATCATGTGCTCAT	-31	True	NA	NA	False	NA	NA	NA	59805840	59904732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
tx.13744	chr4	+	3529	8	ISM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	3	8012	3	2171	5prime_fragment	FALSE	canonical	3	98	junction_2	9.81876587282262	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCTGGCAGTATGAGC	-29	True	NA	NA	False	NA	NA	NA	59805842	59896725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524
tx.13745	chr4	-	3527	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222748.2	2564	4	-38	-925	-38	-3	multi-exon	FALSE	canonical	2	4	junction_3	15.556349186104	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAAGTGGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	62126477	62107779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126314
tx.13746	chr4	-	3516	4	FSM	ENSMUSG00000028389.13	ENSMUST00000068822.4	3494	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	7	junction_3	14.142135623731	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	62126705	62107776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126556
tx.13747	chr4	-	3581	4	FSM	ENSMUSG00000028389.13	ENSMUST00000221329.2	1776	4	-184	-1621	-99	-3	multi-exon	FALSE	canonical	3	15	junction_3	10.3708994574027	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAAGTGGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	62126782	62107779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126565
tx.13748	chr4	-	3582	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222050.2	2017	4	-116	-1449	-100	0	multi-exon	FALSE	canonical	3	19	junction_3	8.48528137423857	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	62126783	62107776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62110927_62122755_62122888_62123260_62123343_62126565
tx.13749	chr4	+	6717	2	Antisense	novelGene_ENSMUSG00000028389.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCTGTCCTGTAAAC	NA	False	NA	NA	False	NA	NA	NA	62149233	62157613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_62149549_62151211
tx.1375	chr10	-	4406	22	NIC	ENSMUSG00000039089.16	novel	4572	22	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_21	6.02037357305871	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTTTTATATATGTAT	NA	False	NA	NA	False	NA	NA	NA	26251995	26150367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251906
tx.13750	chr4	+	1812	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	8	0	8	0	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	NA	False	NA	NA	NA	62204693	62216648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
tx.13751	chr4	-	4283	28	FSM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	-24	5	0	-5	multi-exon	FALSE	canonical	3	62	junction_18	17.8933741789013	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACTGTTGTGTTCCTTT	6970	False	NA	NA	False	NA	NA	NA	62278731	62218583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
tx.13752	chr4	-	4369	19	FSM	ENSMUSG00000066151.13	ENSMUST00000107461.2	2337	19	-12	-2020	2	4	multi-exon	FALSE	canonical	3	62	junction_9	12.2877033786216	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTAGTGCTCCAATTGGT	6918	False	NA	NA	False	NA	NA	NA	62278783	62236858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
tx.13753	chr4	+	3730	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	-14	2	-14	-2	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	1067	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTCTGTCTACACA	NA	False	NA	NA	False	NA	NA	NA	62278949	62310004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
tx.13754	chr4	-	1580	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	-778	0	778	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGACTCTTTATTATTG	2681	False	NA	NA	False	NA	NA	NA	62326862	62312041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
tx.13755	chr4	-	1481	3	FSM	ENSMUSG00000066149.12	ENSMUST00000107459.2	654	3	2	-829	2	778	multi-exon	FALSE	canonical	3	31	junction_2	175	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGACTCTTTATTATTG	2683	False	NA	NA	False	NA	NA	NA	62326860	62312041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62313259_62320960_62321153_62326788
tx.13756	chr4	-	4799	3	ISM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	19	0	2	0	intron_retention	FALSE	canonical	3	381	junction_1	0.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGACGTCCTTAAAGGT	2683	False	NA	NA	False	NA	NA	NA	62326860	62312819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_62313259_62320960_62321153_62322692
tx.13757	chr4	+	2836	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	-1	2388	-1	1271	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	413	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTGAAAGGATTATTTT	NA	False	NA	NA	False	NA	NA	NA	62327032	62342839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
tx.13758	chr4	-	2572	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	0	-23	0	23	multi-exon	FALSE	canonical	3	20	junction_10	54.6457683631587	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTTATTTTAGGC	NA	False	NA	NA	False	NA	NA	NA	62389124	62370845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
tx.13759	chr4	-	2480	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-7	-1033	2	31	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTTAGGCCTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	62389131	62370837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
tx.1376	chr10	+	3628	15	FSM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	23	0	23	0	multi-exon	FALSE	canonical	3	7	junction_6	3.14934395500694	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCCTATTTACTACTA	NA	False	NA	NA	False	NA	NA	NA	26648495	26794644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_26648693_26721927_26722125_26725870_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776_26763984_26765727_26765869_26788602_26788728_26792388_26792451_26793000
tx.13760	chr4	+	2172	6	FSM	ENSMUSG00000028392.16	ENSMUST00000107449.4	2167	6	-8	3	-8	-3	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATGTCTTTGCTGGTAA	9548	False	NA	NA	False	NA	NA	NA	62398281	62415532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234
tx.13761	chr4	-	1222	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-15	-1	-15	1	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	410	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCCCTCTTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	62438170	62427404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
tx.13762	chr4	-	1800	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	2	3	2	-3	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACTCATACAATGTGC	NA	False	NA	NA	False	NA	NA	NA	62443303	62440888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
tx.13763	chr4	+	4345	23	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-132	-2	combination_of_known_junctions	TRUE	canonical	2	39	junction_18	14.1957973061405	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTCTGTGTATTCCTG	NA	False	NA	NA	False	NA	NA	NA	62501705	62621253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
tx.13764	chr4	+	4607	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-133	-2402	-133	1	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCGACTCCTGTCATCAA	NA	False	NA	NA	False	NA	NA	NA	62501704	62578078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
tx.13765	chr4	-	5286	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7366	-19	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	7.87947763499926	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAAATCCCCAAAGCT	NA	False	NA	NA	False	NA	NA	NA	63328957	63285380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
tx.13766	chr4	-	4114	12	FSM	ENSMUSG00000039137.19	ENSMUST00000063650.10	4016	12	-100	2	-60	-2	multi-exon	FALSE	canonical	3	12	junction_3	10.7826000023147	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCCAGTGTTCTATG	4418	False	NA	NA	False	NA	NA	NA	63414288	63333148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
tx.13767	chr4	-	4562	5	ISM	ENSMUSG00000039137.19	ENSMUST00000155058.8	2537	7	10933	3	9540	-3	3prime_fragment	FALSE	canonical	3	12	junction_3	6.64736790015417	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGGCCAGTGTTCTAT	3763	False	NA	NA	False	NA	NA	NA	63340626	63333149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658
tx.13768	chr4	-	2882	7	FSM	ENSMUSG00000039137.19	ENSMUST00000063672.10	2804	7	-73	-5	-73	5	multi-exon	FALSE	canonical	3	23	junction_2	9.97357620025145	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAACTCCATAATTGCAG	4405	False	NA	NA	False	NA	NA	NA	63414301	63349664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
tx.13769	chr4	-	2098	4	FSM	ENSMUSG00000039137.19	ENSMUST00000133425.2	797	4	-1301	0	-69	0	multi-exon	FALSE	canonical	3	16	junction_1	15.1070255914995	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGTAATGAAACTCACT	4409	False	NA	NA	False	NA	NA	NA	63414297	63378399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_63378705_63379518_63379645_63390886_63391106_63412849
tx.1377	chr10	+	5500	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	5	-618	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	270	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAAAACATCTTGGCA	NA	False	NA	NA	False	NA	NA	NA	27950820	28472775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
tx.13770	chr4	-	4608	3	NNC	ENSMUSG00000039137.19	novel	2741	12	NA	NA	-74	-7513	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	25.5	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTTCTTTGTGGTG	4404	False	NA	NA	False	NA	NA	NA	63414302	63386569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_63389506_63390886_63391106_63412849
tx.13771	chr4	-	4819	3	NNC	ENSMUSG00000039137.19	novel	2741	12	NA	NA	-73	-7516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.5	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGCTTTTTCTTTGTG	4405	False	NA	NA	False	NA	NA	NA	63414301	63386572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_63389721_63390886_63391106_63412849
tx.13772	chr4	+	1027	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	59	49	59	-49	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	862	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTGGCTCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	63463067	63468938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_63463237_63466821_63466923_63468181
tx.13773	chr4	+	3828	10	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-291	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.5414365925061	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTAAGGGACCATGTT	NA	False	NA	NA	False	NA	NA	NA	63476726	63504594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_63476967_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
tx.13774	chr4	+	5081	9	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	0	-634	intron_retention	FALSE	canonical	3	53	junction_7	10.2827221590394	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTGCTCGTGGAGGCG	NA	False	NA	NA	False	NA	NA	NA	63477017	63503956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
tx.13775	chr4	+	3793	10	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	22.7888861801829	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTAGTAAGGGACCATG	NA	False	NA	NA	False	NA	NA	NA	63477017	63504592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_63477195_63479118_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
tx.13776	chr4	+	3765	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTAAGGGACCATGTT	NA	False	NA	NA	False	NA	NA	NA	63477017	63504594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
tx.13777	chr4	+	3168	2	FSM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	25	1	25	-1	multi-exon	FALSE	canonical	3	75	junction_1	0	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGGTCATGTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	65523247	65534474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_65523307_65531365
tx.13778	chr4	+	3166	2	FSM	ENSMUSG00000051675.14	ENSMUST00000107366.2	3191	2	25	0	25	0	multi-exon	FALSE	canonical	3	41	junction_1	0	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	NA	False	NA	NA	NA	65523247	65534475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_65523307_65531368
tx.13779	chr4	-	5683	37	FSM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	-3	6167	-3	0	multi-exon	FALSE	canonical	3	146	junction_29	30.4796025702355	256	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	NA	False	NA	NA	NA	70328683	70141259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
tx.1378	chr10	+	6011	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-5	-80	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_13	36.8965194972466	42	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTTACTGATTGAACA	NA	False	NA	NA	False	NA	NA	NA	27950844	28473313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
tx.13780	chr4	-	5708	38	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_10	42.090739921554	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	NA	False	NA	NA	NA	70328681	70141259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
tx.13781	chr4	-	3472	18	NIC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	12	0	combination_of_known_splicesites	TRUE	canonical	3	30	junction_12	75.0867088160778	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	NA	False	NA	NA	NA	72119144	72036041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
tx.13782	chr4	-	3720	19	NNC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	76.8138080758343	239	2	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	NA	False	NA	NA	NA	72119170	72036041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
tx.13783	chr4	-	3772	19	NNC	ENSMUSG00000008305.19	novel	2569	20	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	84.7656901241429	14	2	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	NA	False	NA	NA	NA	72119193	72036042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
tx.13784	chr4	-	2135	7	FSM	ENSMUSG00000008305.19	ENSMUST00000107337.8	2067	7	-69	1	-12	-1	multi-exon	FALSE	canonical	3	194	junction_1	41.6959896819293	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	72119168	72075817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
tx.13785	chr4	-	2168	7	ISM	ENSMUSG00000008305.19	ENSMUST00000030095.11	2569	20	-782	39376	-15	-1	5prime_fragment	FALSE	canonical	3	29	junction_1	99.9656885580692	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	72119171	72075817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
tx.13786	chr4	+	4131	21	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-49	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	72.8474433319386	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	74170123	74324098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_74170324_74181045_74181207_74189430_74189607_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
tx.13787	chr4	+	4254	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	-57	-1	-57	1	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	386	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	74170115	74324098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
tx.13788	chr4	+	4337	22	NNC	ENSMUSG00000028397.14	novel	1844	8	NA	NA	187	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.2580822483617	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	74170359	74324098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_74170651_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
tx.13789	chr4	-	738	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	3	0	3	0	multi-exon	FALSE	canonical	3	402	junction_1	0	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAGTTCTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	75196539	75195590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_75196007_75196217
tx.1379	chr10	+	2013	4	NNC	ENSMUSG00000110723.2	novel	724	3	NA	NA	-23023	-22323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.94392028877595	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGAGAAAATGTAGCT	NA	False	NA	NA	False	NA	NA	NA	29051926	29075613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_29052019_29056957_29057030_29072260_29073437_29074940
tx.13790	chr4	+	1730	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	14	1322	14	-1322	multi-exon	FALSE	canonical	3	28	junction_1	0	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGTGGTTTGTGGTGTTG	NA	False	NA	NA	False	NA	NA	NA	80828896	80872543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_80829883_80871799
tx.13791	chr4	-	8747	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	12	4	12	-4	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGAATGTTTTTATCCT	NA	False	NA	NA	False	NA	NA	NA	82777898	82716978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
tx.13792	chr4	-	8827	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-5	9	-5	-9	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGGATTACAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	83242497	83138545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
tx.13793	chr4	-	1833	16	FSM	ENSMUSG00000038172.15	ENSMUST00000048274.11	1804	16	-31	2	-15	-2	multi-exon	FALSE	canonical	3	169	junction_7	23.0820757780192	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACAAATTCAATTTTCC	NA	False	NA	NA	False	NA	NA	NA	83242507	83158048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
tx.13794	chr4	+	1397	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	8	0	1	0	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATTCTTTTCTCCAA	NA	False	NA	NA	False	NA	NA	NA	83335968	83371577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
tx.13795	chr4	+	937	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	3	2	3	-2	multi-exon	FALSE	canonical	3	396	junction_3	22.8875512014719	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTTTCTAGTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	83335970	83360321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
tx.13796	chr4	-	4348	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	10	-1107	4	1107	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	2024	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTGGCTAGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	83404686	83372809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
tx.13797	chr4	-	3690	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	17783	-1220	-3633	1220	3prime_fragment	FALSE	canonical	3	958	junction_5	364.387902117889	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATGTTTATCTGTCATC	3088	False	NA	NA	False	NA	NA	NA	83386913	83372696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819
tx.13798	chr4	-	1965	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	8	0	8	0	multi-exon	FALSE	canonical	3	116	junction_1	501.525034270474	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	83404682	83380107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
tx.13799	chr4	-	3007	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	13	6191	7	0	5prime_fragment	FALSE	canonical	3	1502	junction_9	115.542200082913	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	83404683	83380107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
tx.1380	chr10	+	2284	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	51	1521	51	388	multi-exon	FALSE	canonical	3	81	junction_5	6.04648658313239	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCACGACCTATGGAT	NA	False	NA	NA	False	NA	NA	NA	29189546	29221944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
tx.13800	chr4	+	5107	24	ISM	ENSMUSG00000052407.18	ENSMUST00000231339.2	4549	26	-3	68192	-3	-2198	5prime_fragment	FALSE	canonical	1	1	junction_18	3.95245849647426	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGTATTCATCAATTT	8686	False	NA	NA	False	NA	NA	NA	83443778	83714715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83476135_83476268_83498984_83499132_83519844_83519938_83522258_83522420_83539061_83539201_83553876_83553980_83573764_83573872_83575548_83575639_83576557_83576759_83579952_83580121_83581738_83581928_83599241_83599747_83600535_83600653_83611983_83612211_83612489_83612673_83614487_83614674_83661164_83661311_83670090_83670146_83713436
tx.13801	chr4	-	3899	7	FSM	ENSMUSG00000028487.19	ENSMUST00000107198.9	3948	7	-59	108	-40	15	multi-exon	FALSE	canonical	1	4	junction_2	2.98142396999972	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTTCTTACAGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	84593363	84193573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
tx.13802	chr4	+	2950	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	-128	0	-128	0	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	445	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTTCTGCTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	85123549	85307617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
tx.13803	chr4	-	6019	16	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	6	6	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	50.9603767646983	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCCTGTATTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	86530280	86497085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86523873_86523953_86526131_86526228_86529922
tx.13804	chr4	-	3791	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-9	-2181	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	46.3221987145472	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCACTAACGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	86530265	86499272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
tx.13805	chr4	-	6147	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	8	3	2	-3	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	284	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTGGAATTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	86530284	86497094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
tx.13806	chr4	-	1703	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	45	140	-29	-140	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	586	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCTCCTGTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	86588252	86574941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
tx.13807	chr4	+	7941	33	FSM	ENSMUSG00000038024.18	ENSMUST00000082026.14	7940	33	-1	0	-1	0	multi-exon	FALSE	canonical	3	25	junction_19	11.8372756050537	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8170	False	NA	NA	False	NA	NA	NA	86666790	86768840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
tx.13808	chr4	+	7796	32	NIC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	33	junction_19	10.1503781653229	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGGTGTCTGTTGAAT	8165	False	NA	NA	False	NA	NA	NA	86666785	86768837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
tx.13809	chr4	+	3982	11	ISM	ENSMUSG00000038024.18	ENSMUST00000142837.3	5870	31	51104	-1548	47516	0	3prime_fragment	FALSE	canonical	3	53	junction_8	6.70522184569608	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	NA	False	NA	NA	False	NA	NA	NA	86743595	86768840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
tx.1381	chr10	-	2205	4	FSM	ENSMUSG00000038876.13	ENSMUST00000161508.3	945	4	-16	-1244	5	201	multi-exon	FALSE	canonical	3	17	junction_3	93.3821301011185	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCCATAGGTCGTG	NA	False	NA	NA	False	NA	NA	NA	29238038	29221970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237959
tx.13810	chr4	-	833	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	43	2	-15	-2	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	1616	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	NA	NA	NA	86775606	86772898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
tx.13811	chr4	-	1241	4	FSM	ENSMUSG00000028495.15	ENSMUST00000136174.8	1128	4	29	-142	16	-2	multi-exon	FALSE	canonical	3	14010	junction_1	4247.77282820068	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	NA	NA	NA	86775553	86772898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964
tx.13812	chr4	+	4298	6	FSM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	-73	-9	-73	9	multi-exon	FALSE	canonical	2	4	junction_1	3.00665927567458	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTTTCTTTAAACAT	NA	False	NA	NA	False	NA	NA	NA	86792559	86839121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_86792834_86804394_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
tx.13813	chr4	+	4146	5	ISM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	11631	0	11613	0	3prime_fragment	FALSE	canonical	2	7	junction_3	2.29128784747792	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAAATTATTTCTTTC	7697	False	NA	NA	False	NA	NA	NA	86804263	86839112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
tx.13814	chr4	+	712	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	29	2202	29	129	multi-exon	FALSE	canonical	3	467	junction_1	0	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTGTGGTTCAAGA	4149	False	NA	NA	False	NA	NA	NA	86848956	86850857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_86849080_86850268
tx.13815	chr4	-	4051	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	10	2008	10	740	multi-exon	TRUE	canonical	2	10	junction_9	3.7	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTTTCTGTATAATTT	NA	False	NA	NA	False	NA	NA	NA	87951591	87690169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
tx.13816	chr4	+	5812	44	FSM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	-20	-1	-19	1	multi-exon	TRUE	canonical	0	0	junction_35	26.0666035463672	170	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGACTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	88012846	88329244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
tx.13817	chr4	+	5543	43	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_34	31.831445611301	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	88012859	88329246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
tx.13818	chr4	-	4794	7	FSM	ENSMUSG00000028497.13	ENSMUST00000151280.8	4680	7	22	-136	9	136	multi-exon	TRUE	canonical	2	3	junction_1	2.26691175145591	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCGTTTGGTAACTACT	NA	False	NA	NA	False	NA	NA	NA	88357143	88328441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696_88355801_88357069
tx.13819	chr4	+	2540	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	258	-1	258	1	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	621	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAGATTATACTTGAG	5306	False	NA	NA	False	NA	NA	NA	89055616	89099319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
tx.1382	chr10	-	2599	4	FSM	ENSMUSG00000038876.13	ENSMUST00000214896.2	781	4	1	-1819	1	611	multi-exon	FALSE	canonical	3	10	junction_3	95.3601360923712	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGTTATGTGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	29238042	29221560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237979
tx.13820	chr4	-	1361	2	FSM	ENSMUSG00000073802.6	ENSMUST00000097981.6	1390	2	28	1	28	-1	multi-exon	FALSE	canonical	3	16	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAAGTTCAACTTGGTT	NA	False	NA	NA	False	NA	NA	NA	89229248	89224536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_89225552_89228902
tx.13821	chr4	-	3677	6	FSM	ENSMUSG00000008489.19	ENSMUST00000107110.8	3671	6	-5	-1	-5	1	multi-exon	FALSE	canonical	0	0	junction_5	41.6461282714252	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATCTTTAAATACATC	NA	False	NA	NA	False	NA	NA	NA	91260276	91138998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
tx.13822	chr4	-	3671	6	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.2082863444267	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	91260277	91139002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
tx.13823	chr4	-	3723	7	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	40.2947473830854	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	91260290	91139002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
tx.13824	chr4	-	3693	7	NNC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	488	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	39.660013447636	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGAACTGTGTATCTTT	NA	False	NA	NA	False	NA	NA	NA	91259705	91139007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259576
tx.13825	chr4	-	2017	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-9	5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	115.798316049932	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTTTTGCTTCATTAC	NA	False	NA	NA	False	NA	NA	NA	94445012	94388312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_94389654_94437355_94437432_94438658_94438744_94439501_94439703_94444698
tx.13826	chr4	-	2087	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	20	0	-10	0	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	285	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	94445013	94388317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
tx.13827	chr4	-	1653	2	FSM	ENSMUSG00000028578.9	ENSMUST00000153294.2	2075	2	-5	427	-5	-427	multi-exon	FALSE	canonical	3	294	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGAGAACTTACATTCT	NA	False	NA	NA	False	NA	NA	NA	94445008	94438359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_94439703_94444698
tx.13828	chr4	-	4427	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	20	-1663	20	10	multi-exon	TRUE	canonical	3	626	junction_12	53.7532164993284	1236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGTGCCATTATAACAC	NA	False	NA	NA	False	NA	NA	NA	94491461	94455740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
tx.13829	chr4	+	2177	21	NNC	ENSMUSG00000028576.13	novel	2139	20	NA	NA	11	231	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	41.7957832801348	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTGCCCCACCCGGCA	NA	False	NA	NA	False	NA	NA	NA	94502738	94581697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187_94581351_94581532
tx.1383	chr10	-	2154	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	370	1799	-25	201	multi-exon	FALSE	canonical	3	77	junction_2	74.5	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCCATAGGTCGTG	NA	False	NA	NA	False	NA	NA	NA	29238068	29221970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_29223880_29230287_29230444_29237979
tx.13830	chr4	+	2126	20	FSM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	17	-4	17	4	multi-exon	FALSE	canonical	3	154	junction_8	18.5526129152575	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTTCCTGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	94502744	94581470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
tx.13831	chr4	-	7399	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	11	10	11	-10	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTTGTAAATTATTAG	NA	False	NA	NA	False	NA	NA	NA	94867326	94830286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
tx.13832	chr4	-	7436	20	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	2	3	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_15	19.8294668670816	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAGCAATGTTATTGAA	NA	False	NA	NA	False	NA	NA	NA	94867335	94830273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840615_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
tx.13833	chr4	+	1887	16	FSM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	4	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	4.66476151587624	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCACTTATGTCTGT	NA	False	NA	NA	False	NA	NA	NA	95445747	95815176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
tx.13834	chr4	+	5470	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	46	1	46	-1	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGGTTTTAGTGG	4760	False	NA	NA	False	NA	NA	NA	95855522	95913649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
tx.13835	chr4	+	6106	44	FSM	ENSMUSG00000061859.18	ENSMUST00000041284.10	7340	44	-8	1242	-2	3	multi-exon	FALSE	canonical	1	2	junction_32	5.98203548240142	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTCGCAATGAACTATT	NA	False	NA	NA	False	NA	NA	NA	98284019	98606598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
tx.13836	chr4	+	4745	20	ISM	ENSMUSG00000061859.18	ENSMUST00000238306.2	7416	45	34	220561	-30	1409	5prime_fragment	FALSE	canonical	2	11	junction_1	4.26088308379139	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCGTGTTGCTGCTTAGA	NA	False	NA	NA	False	NA	NA	NA	98284061	98387279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
tx.13837	chr4	+	3154	4	NIC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	5	-1	intron_retention	FALSE	canonical	3	192	junction_2	120.477752671972	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTTACTTAATGTCCC	NA	False	NA	NA	False	NA	NA	NA	98614989	98626716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682
tx.13838	chr4	+	3134	4	ISM	ENSMUSG00000087166.10	ENSMUST00000154279.3	2942	5	5	1	5	-1	intron_retention	FALSE	canonical	3	363	junction_2	40.8765077873452	640	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTTACTTAATGTCCC	NA	False	NA	NA	False	NA	NA	NA	98614989	98626716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682
tx.13839	chr4	+	2757	2	FSM	ENSMUSG00000087166.10	ENSMUST00000173659.2	2547	2	153	-363	153	-1	multi-exon	FALSE	canonical	3	460	junction_1	0	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTTACTTAATGTCCC	NA	False	NA	NA	False	NA	NA	NA	98621592	98626716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_98622316_98624682
tx.1384	chr10	-	2832	3	ISM	ENSMUSG00000038876.13	ENSMUST00000161508.3	945	4	-20	-1249	1	206	intron_retention	FALSE	canonical	3	41	junction_2	92.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCATAGGTCGTGAGATT	NA	False	NA	NA	False	NA	NA	NA	29238042	29221965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_29223880_29230287_29230444_29237280
tx.13840	chr4	-	5003	10	FSM	ENSMUSG00000035407.9	ENSMUST00000102790.4	4795	10	-208	0	-208	0	multi-exon	FALSE	canonical	1	2	junction_7	7.99228022593531	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTACGATTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	98705982	98643134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_98644823_98649639_98649841_98653699_98653843_98659492_98659713_98661619_98661708_98662910_98663130_98665235_98665348_98666500_98668430_98673895_98673979_98705662
tx.13841	chr4	+	2258	3	FSM	ENSMUSG00000085843.2	ENSMUST00000133455.2	2251	3	-2	-5	-2	5	multi-exon	FALSE	canonical	3	22	junction_2	4	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGCCTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	98682002	98687142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_98682120_98684245_98684324_98685079
tx.13842	chr4	+	3676	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	-152	3	-83	-3	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	406	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	98811963	98823777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
tx.13843	chr4	+	3396	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-42	-3	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	451	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	98812004	98823777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
tx.13844	chr4	+	5633	8	NIC	ENSMUSG00000028560.12	novel	3527	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	279	junction_1	97.7656506600329	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	98812201	98823780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
tx.13845	chr4	+	3590	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-16	3	-16	-3	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	98812030	98823777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
tx.13846	chr4	-	6910	49	FSM	ENSMUSG00000028556.16	ENSMUST00000030286.14	7127	49	36	181	36	2	multi-exon	FALSE	canonical	3	14	junction_27	28.048685042955	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGTGGGATTTTAATT	NA	False	NA	NA	False	NA	NA	NA	99009116	98825088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98881883_98881974_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
tx.13847	chr4	-	6816	48	FSM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-116	-403	37	0	multi-exon	FALSE	canonical	3	95	junction_7	16.1052727349995	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAGTGGGATTTTA	NA	False	NA	NA	False	NA	NA	NA	99009115	98825091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
tx.13848	chr4	+	2809	11	FSM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	-16	-1	-16	1	multi-exon	FALSE	canonical	3	50	junction_1	10.6155546251715	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACACTTTTGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	99082367	99148021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_99082521_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
tx.13849	chr4	+	2979	11	FSM	ENSMUSG00000028550.16	ENSMUST00000030279.15	3178	11	199	0	-14	0	multi-exon	FALSE	canonical	3	33	junction_1	14.1265707091282	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTTTTGTTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	99082369	99148024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_99082690_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
tx.1385	chr10	-	2171	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	-22	-201	-22	201	multi-exon	FALSE	canonical	3	93	junction_2	66.5	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCCATAGGTCGTG	NA	False	NA	NA	False	NA	NA	NA	29238065	29221970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_29223880_29230287_29230444_29237959
tx.13850	chr4	+	2006	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-19	-1633	-19	1633	multi-exon	TRUE	canonical	3	84	junction_1	0	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGCGAATGGATTAAGAA	NA	False	NA	NA	False	NA	NA	NA	99457717	99462881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_99457876_99461033
tx.13851	chr4	+	3109	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	-32	2	-31	-2	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	NA	False	NA	NA	NA	99603869	99651695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
tx.13852	chr4	-	796	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	27	1983	-25	-54	multi-exon	FALSE	canonical	3	74	junction_5	47.6377935572167	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATATGCCTGTATG	NA	False	NA	NA	False	NA	NA	NA	99717396	99655621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
tx.13853	chr4	+	2331	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	38	2	38	-2	multi-exon	TRUE	canonical	3	174	junction_5	14.102836594104	198	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTTGTCGCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	99786648	99844489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
tx.13854	chr4	+	5767	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-2	0	-2	0	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	401	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	NA	False	NA	NA	False	NA	NA	NA	100633869	100861741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
tx.13855	chr4	+	2960	8	FSM	ENSMUSG00000035275.15	ENSMUST00000106955.2	2893	8	-2	-65	-2	65	multi-exon	FALSE	canonical	3	27	junction_5	8.41524370001322	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGTTTATTCCTGACT	NA	False	NA	NA	False	NA	NA	NA	100926177	100992618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051
tx.13856	chr4	+	4045	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTAGTATGTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	100926179	101009567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
tx.13857	chr4	-	4897	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	9	0	0	0	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	421	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	101122470	101009563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
tx.13858	chr4	+	4218	6	FSM	ENSMUSG00000028527.19	ENSMUST00000102780.8	4186	6	-32	0	-32	0	multi-exon	FALSE	canonical	3	31	junction_1	98.0848612172133	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	NA	False	NA	NA	NA	101276441	101324192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_101276568_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
tx.13859	chr4	+	4335	6	FSM	ENSMUSG00000028527.19	ENSMUST00000106946.8	4360	6	25	0	-5	0	multi-exon	FALSE	canonical	3	20	junction_1	102.253410701062	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	NA	False	NA	NA	NA	101276510	101324192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_101276754_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
tx.1386	chr10	-	439	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	12	1081	12	-1081	multi-exon	FALSE	canonical	3	2101	junction_1	71	298	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTGAGTTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	30076544	30073085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_30073223_30074461_30074576_30076356
tx.13860	chr4	+	3973	4	NIC	ENSMUSG00000028527.19	novel	4186	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	134.910670033504	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	NA	False	NA	NA	NA	101276924	101324192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_101277163_101317696_101317870_101320145_101320265_101320749
tx.13861	chr4	+	4088	5	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	414	0	0	0	3prime_fragment	FALSE	canonical	3	206	junction_2	35.8355619462009	325	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	NA	False	NA	NA	NA	101276929	101324192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
tx.13862	chr4	+	4118	4	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	27580	-2	-324	2	3prime_fragment	FALSE	canonical	3	206	junction_1	41.3037528561268	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATGGAATTTCATAAAT	NA	False	NA	NA	False	NA	NA	NA	101304095	101324194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_101304477_101317696_101317870_101320145_101320265_101320749
tx.13863	chr4	+	5110	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	17	0	17	0	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	NA	False	NA	NA	NA	101353861	101499996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
tx.13864	chr4	+	5122	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	-43	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	23.5903830583462	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	NA	False	NA	NA	NA	101353784	101499996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_101353961_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
tx.13865	chr4	+	1889	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	7	2	7	-2	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	527	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAGTTGCATTTCATA	8222	False	NA	NA	False	NA	NA	NA	101504921	101516559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
tx.13866	chr4	+	5542	19	FSM	ENSMUSG00000057722.18	ENSMUST00000106921.9	5542	19	2	-2	-1	2	multi-exon	FALSE	canonical	0	0	junction_5	1.86007433808702	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTGTGCTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	101574602	101670866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_101575136_101585206_101585267_101590463_101590794_101592756_101592881_101602707_101602914_101607483_101607627_101609257_101609403_101622057_101622349_101622500_101622619_101625243_101625444_101628493_101628643_101630032_101630193_101631397_101631481_101637101_101637319_101639741_101639925_101646459_101646556_101647997_101648104_101649191_101649268_101668544
tx.13867	chr4	-	1380	3	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9902	-2	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	141	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTTTTCTTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	101760888	101747218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_101747741_101747885_101748198_101760342
tx.13868	chr4	-	1007	4	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9901	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	190.887983441133	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTTTTCTTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	101760887	101747218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_101747741_101747885_101748198_101760342_101760431_101760802
tx.13869	chr4	-	911	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	0	2	0	-2	multi-exon	FALSE	canonical	3	233	junction_2	115.5	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTTTTCTTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	101750986	101747218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_101747741_101747885_101748198_101750909
tx.1387	chr10	-	1677	2	FSM	ENSMUSG00000075266.6	ENSMUST00000216853.2	4143	2	-57	2523	11	-1083	multi-exon	FALSE	canonical	3	2243	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTCTGAGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	30076545	30073087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_30074576_30076356
tx.13870	chr4	+	3735	4	NNC	ENSMUSG00000070890.4	novel	1452	3	NA	NA	-1947	2181	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_3	2.94392028877595	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTCCTGGAACTC	NA	False	NA	NA	False	NA	NA	NA	101795656	101802561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_101795732_101797576_101797891_101798317_101798903_101799800
tx.13871	chr4	-	2003	3	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9730	1207	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	2.5	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTTTGTTTCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	101828516	101823442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_101824980_101825125_101825438_101828362
tx.13872	chr4	-	2057	4	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9753	1205	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	5.43650214343336	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTGTTTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	101828493	101823444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_101824980_101825125_101825438_101827043_101827123_101828362
tx.13873	chr4	+	4871	15	NIC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	48.1032584071781	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGTCTAGTTAT	2479	False	NA	NA	False	NA	NA	NA	102971553	103022951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_102971717_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
tx.13874	chr4	+	4758	14	NIC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	42.5459028127721	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	2513	False	NA	NA	False	NA	NA	NA	102971587	103022949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_102971717_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
tx.13875	chr4	+	4869	15	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-103	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	47.5884246772816	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTTGTGTGGTGTCTAG	2781	False	NA	NA	False	NA	NA	NA	102971855	103022947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_102972021_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
tx.13876	chr4	+	4774	14	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-83	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	41.8667935524905	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	2801	False	NA	NA	False	NA	NA	NA	102971875	103022949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_102972021_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
tx.13877	chr4	+	4652	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	100	0	-4	0	multi-exon	FALSE	canonical	3	89	junction_1	18.0662361572323	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	443	False	NA	NA	False	NA	NA	NA	102976582	103022949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
tx.13878	chr4	-	4422	12	FSM	ENSMUSG00000028521.18	ENSMUST00000036195.13	4021	12	-394	-7	-33	0	multi-exon	FALSE	canonical	3	35	junction_4	6.03022689155527	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTAGAATTCCTTCC	5264	False	NA	NA	False	NA	NA	NA	103072394	103027845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
tx.13879	chr4	+	1898	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	11	6	11	-6	multi-exon	FALSE	canonical	3	69	junction_1	14.2560294261761	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTCCTTGCCTTAGT	53	False	NA	NA	False	NA	NA	NA	103171019	103223634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
tx.1388	chr10	-	1814	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	55	490	1	0	multi-exon	FALSE	canonical	3	159	junction_10	17.7080882335979	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	NA	False	NA	NA	NA	30476690	30410710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
tx.13880	chr4	+	1780	8	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	32.5739347406756	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCCTTGCCTTAGTT	43	False	NA	NA	False	NA	NA	NA	103171009	103223635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103188501_103188577_103210698_103210849_103223169
tx.13881	chr4	+	1171	7	ISM	ENSMUSG00000028519.17	ENSMUST00000106830.9	5278	15	-32	64457	-32	5	5prime_fragment	FALSE	canonical	3	42	junction_1	2.40947204913349	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGTAACTTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	104224754	104537584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266
tx.13882	chr4	+	5307	15	NNC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	19.9335631229219	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTAGCCTGGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	104224749	104602039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266_104589378_104598709
tx.13883	chr4	+	1082	8	NIC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	7.28991475552747	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACTGTTGTAACTTTC	NA	False	NA	NA	False	NA	NA	NA	104224757	104537580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104537387
tx.13884	chr4	-	8182	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	-2	-211	-2	211	multi-exon	TRUE	canonical	3	64	junction_5	8.06903804675625	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTTGGCAGATACTAG	NA	False	NA	NA	False	NA	NA	NA	104967089	104886859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
tx.13885	chr4	+	3237	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	-82	4	-82	-4	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	393	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCACTGGTGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	105014461	105089957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
tx.13886	chr4	+	8936	68	FSM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-31	1670	-10	-1665	multi-exon	TRUE	canonical	3	60	junction_13	48.8076771804264	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTGCTTTGCTTAAAC	NA	False	NA	NA	False	NA	NA	NA	106173399	106296849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
tx.13887	chr4	+	5289	26	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	90191	-2	-22068	2	3prime_fragment	FALSE	canonical	3	93	junction_12	17.2201742151466	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTGGAGTCTCACAGA	NA	False	NA	NA	False	NA	NA	NA	106263621	106298521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
tx.13888	chr4	+	4413	19	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	94550	-3	-17709	3	3prime_fragment	FALSE	canonical	3	93	junction_5	14.513935406624	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGAGTCTCACAGAC	NA	False	NA	NA	False	NA	NA	NA	106267980	106298522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
tx.13889	chr4	-	3280	12	FSM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	229	12	229	-12	multi-exon	FALSE	canonical	1	3	junction_11	3.44016144153173	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCGACTCAGAGGCTGC	NA	False	NA	NA	False	NA	NA	NA	106321297	106299537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033_106316226_106320891
tx.1389	chr10	-	3780	5	FSM	ENSMUSG00000111080.2_ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	26	-2931	26	-2015	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTCTTATCACGATGAT	NA	False	NA	NA	False	NA	NA	NA	30494449	30481205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
tx.13890	chr4	-	2827	4	FSM	ENSMUSG00000025418.8	ENSMUST00000054472.4	2756	4	-71	0	-71	0	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCACCTTTATTCGCCTGC	NA	False	NA	NA	False	NA	NA	NA	106349551	106340652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_106342643_106343780_106344036_106345175_106345268_106349061
tx.13891	chr4	+	4011	9	FSM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	16	1	16	-1	multi-exon	FALSE	canonical	3	318	junction_6	36.7353287041235	816	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTTGTCATTTATTCA	NA	False	NA	NA	False	NA	NA	NA	106418250	106446309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
tx.13892	chr4	+	3073	2	FSM	ENSMUSG00000043572.8	ENSMUST00000146966.2	644	2	-13	-2416	-8	0	multi-exon	TRUE	canonical	2	6	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	106508286	106512479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_106508346_106509465
tx.13893	chr4	+	2201	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	-10	0	-2	0	multi-exon	FALSE	canonical	3	40	junction_1	0	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	106508292	106512479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_106508329_106510314
tx.13894	chr4	+	2212	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106782.2	502	2	33	-1743	-1	0	multi-exon	FALSE	canonical	3	39	junction_1	0	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	106508298	106512479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_106508346_106510314
tx.13895	chr4	-	2084	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	35	2	-8	2	multi-exon	TRUE	canonical	3	276	junction_4	15.561903466677	302	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGTGTTGTTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	106536106	106519454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
tx.13896	chr4	-	3390	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	17	2282	14	398	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGACATTCAACAGAATT	NA	False	NA	NA	False	NA	NA	NA	106657026	106604033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
tx.13897	chr4	+	3072	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-25	148	-25	-148	multi-exon	TRUE	canonical	3	121	junction_13	39.9235428457496	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACATTGTAGCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	106768641	106906743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
tx.13898	chr4	+	3110	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	-61	-1125	2	-2	multi-exon	FALSE	canonical	3	47	junction_5	51.1955503437555	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTTCCTGACATACTT	NA	False	NA	NA	False	NA	NA	NA	106768668	106906889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
tx.13899	chr4	+	2026	8	ISM	ENSMUSG00000061887.15	ENSMUST00000124936.8	1719	14	81744	-937	-599	-65	3prime_fragment	FALSE	canonical	3	121	junction_3	9.43289943955382	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTAGTTTGTGTACG	NA	False	NA	NA	False	NA	NA	NA	106894799	106906826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
tx.1390	chr10	-	4934	16	FSM	ENSMUSG00000039697.17	ENSMUST00000068567.5	5105	16	167	4	167	2	multi-exon	FALSE	canonical	1	1	junction_15	2.09337579574768	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCTTTCCTAAAG	NA	False	NA	NA	False	NA	NA	NA	30678936	30521583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_30523648_30523962_30524037_30524440_30524537_30528931_30529085_30530306_30530439_30538289_30538438_30565699_30565869_30566752_30567784_30570064_30570250_30572063_30572190_30574125_30574240_30577914_30578023_30580596_30580677_30598641_30598863_30647715_30647837_30678824
tx.13900	chr4	-	1476	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	14	8	14	3	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	407	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGAGATTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	106924051	106913078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
tx.13901	chr4	-	1976	6	NNC	ENSMUSG00000028619.16	novel	6431	5	NA	NA	-57	452	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	29.9492904757358	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGCATAGTTTCCCCC	NA	False	NA	NA	False	NA	NA	NA	107035801	106996014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_106996997_107004711_107004906_107022744_107022887_107033670_107033822_107034761_107034902_107035434
tx.13902	chr4	-	1591	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	177	4663	-4	452	multi-exon	FALSE	canonical	3	63	junction_1	11	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGCATAGTTTCCCCC	NA	False	NA	NA	False	NA	NA	NA	107035567	106996014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
tx.13903	chr4	+	1499	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	274	2	6	0	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	1257	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGAGTGTTGGGCTTT	NA	False	NA	NA	False	NA	NA	NA	107035869	107058191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
tx.13904	chr4	-	1501	7	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	5748	0	-4257	0	3prime_fragment	FALSE	canonical	3	194	junction_4	8.78761755097604	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	NA	False	NA	NA	NA	107104981	107090710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490
tx.13905	chr4	-	1717	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	38	0	38	0	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	NA	False	NA	NA	NA	107110691	107090710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
tx.13906	chr4	+	683	6	NNC	ENSMUSG00000063172.14	novel	581	6	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.089135660755	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCATTTTTTTTATAT	NA	False	NA	NA	False	NA	NA	NA	107110780	107137133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_107110919_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
tx.13907	chr4	+	649	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	-36	-5	-9	1	multi-exon	FALSE	canonical	3	140	junction_1	99.534114754691	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCCATTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	107111085	107137130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
tx.13908	chr4	+	618	6	FSM	ENSMUSG00000063172.14	ENSMUST00000106749.8	607	6	-11	0	-6	0	multi-exon	FALSE	canonical	3	216	junction_1	69.6746725862418	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTTTTTTTATATAA	NA	False	NA	NA	False	NA	NA	NA	107111088	107137135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107111160_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
tx.13909	chr4	+	1307	10	FSM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	14	0	-7	0	multi-exon	FALSE	canonical	3	322	junction_9	32.5261528202145	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	NA	False	NA	NA	NA	107171573	107217019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
tx.1391	chr10	+	848	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	10	0	10	0	multi-exon	FALSE	canonical	3	475	junction_4	15.6025638918737	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTCTTCTGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	31189388	31204200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
tx.13910	chr4	+	1183	9	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	129.727599222371	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	107171573	107217020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107216803
tx.13911	chr4	+	4347	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	234	3	-34	-3	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	900	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGAATCTCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	107225214	107273540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
tx.13912	chr4	+	4097	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-35	9	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	152.290429771539	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTTCATCAAACACTGA	NA	False	NA	NA	False	NA	NA	NA	107225213	107273529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
tx.13913	chr4	+	2647	4	ISM	ENSMUSG00000028614.15	ENSMUST00000149366.2	4320	17	27081	-21	13534	-2	3prime_fragment	FALSE	canonical	3	631	junction_2	41.8754767800386	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGAATCTCTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	107252192	107273541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_107252259_107252928_107253030_107268262_107268424_107271222
tx.13914	chr4	+	4148	17	NIC	ENSMUSG00000028613.16	novel	7391	19	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	21.0887262536171	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATAGAATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	107659360	107731094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
tx.13915	chr4	+	4202	18	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	11	junction_4	25.8910413224583	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	107659347	107731096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
tx.13916	chr4	+	4330	18	FSM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	289	-1	-6	0	multi-exon	FALSE	canonical	3	14	junction_17	23.2122745240813	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	107659354	107731096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
tx.13917	chr4	+	4327	18	NIC	ENSMUSG00000028613.16	novel	7391	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	26.1980743633195	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	107659360	107731096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
tx.13918	chr4	+	4142	17	NIC	ENSMUSG00000028613.16	novel	4555	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	16.2922527601311	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	107659365	107731096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
tx.13919	chr4	+	4488	18	FSM	ENSMUSG00000028613.16	ENSMUST00000106733.10	3333	18	-76	-1079	37	-2	multi-exon	FALSE	canonical	2	4	junction_5	24.7261821364517	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGTATAGAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	107659397	107731093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
tx.1392	chr10	-	1108	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	-5	0	-4	0	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGGATCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31321855	31208372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
tx.13920	chr4	+	3212	5	ISM	ENSMUSG00000028613.16	ENSMUST00000106732.10	2531	19	-277	22416	-1	948	5prime_fragment	FALSE	canonical	3	45	junction_4	22.9346898823594	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACAGAGGGTGTGAGTGG	NA	False	NA	NA	False	NA	NA	NA	107659359	107707124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640
tx.13921	chr4	+	4147	18	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	37	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	22.8239842283367	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATAGAATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	107659397	107731094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
tx.13922	chr4	+	653	5	FSM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	10	29	10	8	multi-exon	FALSE	canonical	3	977	junction_1	47.9446295219809	196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATCTTTTTTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	107736961	107744592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107737143_107738089_107738149_107740264_107740376_107742113_107742197_107744373
tx.13923	chr4	+	1377	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	32	1588	-4	-6	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTATACTTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	107747041	107754993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
tx.13924	chr4	+	2631	7	FSM	ENSMUSG00000028608.16	ENSMUST00000120473.8	835	7	-24	-1772	-4	0	multi-exon	FALSE	canonical	3	475	junction_1	106.405931330082	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	107747041	107754315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069
tx.13925	chr4	+	3254	6	ISM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	219	10	-1	-10	intron_retention	FALSE	canonical	3	677	junction_4	48.5246329197862	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATGTATACTTGTGT	NA	False	NA	NA	False	NA	NA	NA	107747314	107754989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069
tx.13926	chr4	+	1326	7	FSM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	219	6	-1	-6	multi-exon	FALSE	canonical	3	677	junction_4	47.0558179187229	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTATACTTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	107747314	107754993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
tx.13927	chr4	-	2343	5	FSM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	28	1	6	1	multi-exon	FALSE	canonical	3	130	junction_2	11.5866302262565	177	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGTTCCTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	107780779	107761178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_107761761_107764117_107765423_107769837_107769945_107771460_107771542_107780511
tx.13928	chr4	-	1448	5	FSM	ENSMUSG00000028603.16	ENSMUST00000106701.2	772	5	34	-710	-22	-1	multi-exon	TRUE	canonical	3	566	junction_3	53.5601297608585	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGCTTTTACTGTG	NA	False	NA	NA	False	NA	NA	NA	107928582	107901036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453
tx.13929	chr4	-	2626	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	13	1	13	-1	multi-exon	FALSE	canonical	3	305	junction_7	132.795314509043	389	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGCTTTTACTGTG	NA	False	NA	NA	False	NA	NA	NA	107975716	107901036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
tx.1393	chr10	-	1199	7	FSM	ENSMUSG00000000296.9	ENSMUST00000000305.7	1308	7	108	1	4	0	multi-exon	FALSE	canonical	3	31	junction_2	224.403654159196	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGGATCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31321846	31208372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
tx.13930	chr4	+	1268	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	38	1	9	0	multi-exon	TRUE	canonical	3	713	junction_3	43.9463758530471	192	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	NA	False	NA	NA	NA	108022671	108036504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
tx.13931	chr4	-	9059	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-140	-6636	-14	6636	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTATGAGTGTCTAT	5529	False	NA	NA	False	NA	NA	NA	108075259	108032298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
tx.13932	chr4	-	2431	14	FSM	ENSMUSG00000034645.15	ENSMUST00000106690.9	2421	14	-10	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	23.6810662641758	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTTTTCTTTTAG	5533	False	NA	NA	False	NA	NA	NA	108075255	108039130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108039319_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
tx.13933	chr4	-	2237	11	ISM	ENSMUSG00000034645.15	ENSMUST00000106690.9	2421	14	-9	5151	-9	-5151	5prime_fragment	FALSE	canonical	1	26	junction_5	16.8110082981361	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGTTTTTTATTTTT	5534	False	NA	NA	False	NA	NA	NA	108075254	108044281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
tx.13934	chr4	-	8707	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	-23	7	-23	-7	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAAGTGTGGTCTACTT	NA	False	NA	NA	False	NA	NA	NA	108158316	108086927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
tx.13935	chr4	+	3695	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	8	11	-5	-11	multi-exon	FALSE	canonical	3	432	junction_2	33.5	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTCTTACATACTGTT	NA	False	NA	NA	False	NA	NA	NA	108185344	108198730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_108185488_108189407_108189549_108195319
tx.13936	chr4	-	1035	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	233	21	-4	-21	multi-exon	FALSE	canonical	3	159	junction_2	16.5	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGCCCGTGGAAACCT	NA	False	NA	NA	False	NA	NA	NA	108263925	108257607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108258195_108260397_108260660_108263739
tx.13937	chr4	+	5855	30	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_25	25.401508283324	40	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	NA	False	NA	NA	NA	108317210	108416612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
tx.13938	chr4	+	5847	30	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	584	0	0	0	3prime_fragment	FALSE	canonical	3	91	junction_25	21.0061991869214	92	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	NA	False	NA	NA	NA	108317206	108416612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
tx.13939	chr4	+	5858	30	NIC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_25	27.6159322606615	33	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTTGGTTAATTCATC	NA	False	NA	NA	False	NA	NA	NA	108317211	108416613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406422_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
tx.1394	chr10	-	3098	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	-539	8454	-539	-8454	multi-exon	FALSE	canonical	3	16	junction_4	4.8	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGCTTAAACTGTTA	NA	False	NA	NA	False	NA	NA	NA	31485719	31377642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
tx.13940	chr4	-	1502	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	14	0	14	0	multi-exon	FALSE	canonical	3	462	junction_7	44.4233283170614	356	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	108436519	108422066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
tx.13941	chr4	-	4842	8	ISM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	12	-4	12	4	intron_retention	FALSE	canonical	3	462	junction_7	44.1195037624507	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTTGTTTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	108436521	108422062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565
tx.13942	chr4	+	3013	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	1	0	1	0	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	779	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5273	False	NA	NA	False	NA	NA	NA	108436651	108472030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
tx.13943	chr4	+	3282	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	16	5	16	-5	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	350	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTTTTATGTAGCCAT	3549	False	NA	NA	False	NA	NA	NA	108477152	108491315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
tx.13944	chr4	-	5186	19	FSM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-49	1322	-49	471	multi-exon	FALSE	canonical	2	6	junction_1	6.31771954481311	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTGTCATGTTTAGAT	585	False	NA	NA	False	NA	NA	NA	108638044	108495984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
tx.13945	chr4	-	3379	9	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-83	47404	-83	-45611	5prime_fragment	FALSE	canonical	3	17	junction_6	3.56852560590505	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTTAGAGGCCTTATA	551	False	NA	NA	False	NA	NA	NA	108638078	108542066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
tx.13946	chr4	-	5282	4	NIC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	1029	junction_3	68.5921926234239	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAAATGTGTGTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	108690767	108671495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_108676535_108683296_108683411_108687714_108687781_108690704
tx.13947	chr4	-	3006	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-18	-1955	-18	-468	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTTTGCATTTTGATC	NA	False	NA	NA	False	NA	NA	NA	108690779	108671959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
tx.13948	chr4	-	2218	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	26	897	-24	-897	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	584	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTCTTTTCTATTTCT	NA	False	NA	NA	False	NA	NA	NA	108690785	108672388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
tx.13949	chr4	-	2213	6	NNC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	-676	-897	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_5	429.345268985231	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTCTTTTCTATTTCT	NA	False	NA	NA	False	NA	NA	NA	108691487	108672388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108691411
tx.1395	chr10	-	2146	11	FSM	ENSMUSG00000039531.9	ENSMUST00000218055.2	2180	11	34	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	16.213882940246	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	33827221	33795137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
tx.13950	chr4	+	1292	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	60	7	26	-7	multi-exon	FALSE	canonical	3	773	junction_6	37.6592913133296	503	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTATGGTGGCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	108691857	108719317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
tx.13951	chr4	+	1141	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	49	2137	49	-1	multi-exon	FALSE	canonical	3	36	junction_4	5.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCTGCTTGTTTCCTAT	NA	False	NA	NA	False	NA	NA	NA	108736308	108798384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
tx.13952	chr4	+	3710	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	-12	613	-12	3	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	1083	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGACGTGTGTGCATTTT	9928	False	NA	NA	False	NA	NA	NA	108857839	108918361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
tx.13953	chr4	-	2623	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	6	505	6	0	multi-exon	FALSE	canonical	1	25	junction_18	113.002776514562	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	108975213	108918846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
tx.13954	chr4	-	2591	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	13	0	-1	0	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	108975220	108918846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
tx.13955	chr4	+	2003	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16185	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	34	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTTGTCTTATTTCTA	NA	False	NA	NA	False	NA	NA	NA	109075496	109111768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
tx.13956	chr4	+	5196	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	-11	5	-11	-5	multi-exon	TRUE	canonical	3	117	junction_16	21.9326225188771	252	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTTTGTTATCTTGTC	NA	False	NA	NA	False	NA	NA	NA	109137453	109245009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
tx.13957	chr4	+	5308	25	FSM	ENSMUSG00000028552.14	ENSMUST00000175776.8	2802	25	-154	-2352	-10	0	multi-exon	FALSE	canonical	3	25	junction_9	34.7439043414653	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	109137454	109245014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
tx.13958	chr4	+	4864	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-7	-151	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	34.4426868398588	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTGCATTGAAACTTT	NA	False	NA	NA	False	NA	NA	NA	109137457	109244863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
tx.13959	chr4	+	5138	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	5	-5	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	34.280175536053	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTTTGTTATCTTGTC	NA	False	NA	NA	False	NA	NA	NA	109137469	109245009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_109137642_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
tx.1396	chr10	-	4377	10	FSM	ENSMUSG00000039531.9	ENSMUST00000048222.6	2991	10	-26	-1360	11	175	multi-exon	FALSE	canonical	3	35	junction_9	17.0301113137297	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827244	33800954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
tx.13960	chr4	+	2951	18	FSM	ENSMUSG00000028555.16	ENSMUST00000064129.14	2356	18	20	-615	-3	615	multi-exon	TRUE	canonical	1	2	junction_14	2.90923835738311	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAGGCTCCTTCATGTCC	NA	False	NA	NA	False	NA	NA	NA	109264303	109302557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_109264407_109273183_109273289_109278489_109278622_109279642_109279720_109280071_109280140_109283497_109283563_109285327_109285428_109286083_109286150_109288052_109288162_109288587_109288656_109288735_109288796_109290185_109290348_109295945_109296038_109297718_109297840_109299423_109299536_109299893_109300009_109300704_109300822_109301278
tx.13961	chr4	-	2614	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-6	1453	-6	348	multi-exon	FALSE	canonical	3	201	junction_2	15	303	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTGTGCCATATTTTT	NA	False	NA	NA	False	NA	NA	NA	109333878	109309747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_109311620_109314094_109314265_109333306
tx.13962	chr4	-	2058	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	413	0	413	0	multi-exon	FALSE	canonical	3	20	junction_2	1	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	7256	False	NA	NA	False	NA	NA	NA	109523973	109518072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_109518824_109522214_109522355_109522806
tx.13963	chr4	+	2533	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	26	1909	26	-1909	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	1432	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	NA	False	NA	NA	NA	109533810	109819248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
tx.13964	chr4	+	955	3	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	109862637	109866106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_109862813_109864517_109864840_109865648
tx.13965	chr4	-	3778	6	FSM	ENSMUSG00000028546.18	ENSMUST00000106603.9	3761	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	15	junction_1	6.48074069840786	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	110209123	110060933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
tx.13966	chr4	-	3816	7	NIC	ENSMUSG00000028546.18	novel	3997	7	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.286182749473	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGCTTCCCAAATTT	NA	False	NA	NA	False	NA	NA	NA	110209124	110060935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
tx.13967	chr4	+	1446	6	FSM	ENSMUSG00000028545.14	ENSMUST00000030274.7	1826	6	9	371	9	0	multi-exon	FALSE	canonical	3	7	junction_2	5.19230199429887	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGCATTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	111272211	111317124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_111272598_111288213_111288348_111290365_111290751_111305702_111305852_111311281_111311496_111316946
tx.13968	chr4	+	2407	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	54	5	0	3	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCTCTGGTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	111577234	111686334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
tx.13969	chr4	+	2356	13	FSM	ENSMUSG00000034401.17	ENSMUST00000084354.4	2239	13	-160	43	7	-1	multi-exon	FALSE	canonical	3	19	junction_11	28.7691964897643	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGGTATTTTCATAGG	NA	False	NA	NA	False	NA	NA	NA	111577241	111686338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663180_111679937_111680030_111685382
tx.1397	chr10	-	1070	7	FSM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	17	3	17	3	multi-exon	FALSE	canonical	3	1217	junction_2	78.0243907733701	520	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTGTTTACTTCCTC	NA	False	NA	NA	False	NA	NA	NA	33895603	33872553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
tx.13970	chr4	-	1887	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	-3	1286	-3	-1286	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	515	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAAAAATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	114844441	114817818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
tx.13971	chr4	+	5291	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	1	-7	1	7	multi-exon	TRUE	canonical	3	47	junction_15	11.7923107892389	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	NA	NA	NA	114857356	114900400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
tx.13972	chr10	-	188	1	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATATGTT	9880	False	NA	NA	False	NA	NA	NA	120772176	120771988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_-_120772000_120772200
tx.13973	chr4	+	4666	12	NIC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	-22	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	43.1384471189531	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTGTCTGACTAGAATT	NA	False	NA	NA	False	NA	NA	NA	115594918	115634522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631220_115632257
tx.13974	chr4	+	4630	12	FSM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	-330	0	-1	0	multi-exon	FALSE	canonical	3	13	junction_11	41.468099857422	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTGACTAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	115594939	115634524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
tx.13975	chr4	+	5681	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	3	-2892	3	0	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	252	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTGACTAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	115594943	115634524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
tx.13976	chr4	+	1774	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	-7	393	-7	50	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	267	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCTAGATTTGCATGAT	NA	False	NA	NA	False	NA	NA	NA	115642173	115669118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
tx.13977	chr4	+	2908	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	-26	2	-26	-2	multi-exon	FALSE	canonical	3	40	junction_1	9.42809041582063	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGGTGGGAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	115685262	115693380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
tx.13978	chr4	+	3547	2	ISM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	4253	8	3687	-8	3prime_fragment	FALSE	canonical	3	60	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCAACCACTGGTGGGA	NA	False	NA	NA	False	NA	NA	NA	115689541	115693374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_115691033_115691318
tx.13979	chr4	+	2294	3	NNC	ENSMUSG00000028709.4	novel	2884	4	NA	NA	3637	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	29	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCACTGGTGGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	115689491	115693378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_115689523_115690829_115691033_115691318
tx.1398	chr10	-	1718	2	FSM	ENSMUSG00000049872.9	ENSMUST00000069125.8	5323	2	4	3601	4	-3601	multi-exon	FALSE	canonical	3	31	junction_1	0	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTTTCTGGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	33972511	33967411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_33968512_33971893
tx.13980	chr4	+	2519	13	FSM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	22	2	-1	-2	multi-exon	TRUE	canonical	3	99	junction_1	27.9607860325055	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	115696416	115736445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
tx.13981	chr4	-	4077	5	FSM	ENSMUSG00000028707.16	ENSMUST00000124071.9	4017	5	-61	1	-61	0	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTGATCCATCTTCAT	NA	False	NA	NA	False	NA	NA	NA	115797184	115772316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_115775603_115777170_115777514_115777729_115777909_115780845_115781012_115797081
tx.13982	chr4	-	3623	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	200	4	1	-4	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGATAAGAGTGAATAAA	NA	False	NA	NA	False	NA	NA	NA	115874923	115853869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
tx.13983	chr4	-	2224	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	52	163	52	0	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGTGCGTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	115911021	115890201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
tx.13984	chr4	-	538	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	9	0	-3	0	multi-exon	FALSE	canonical	3	1017	junction_2	25.9272486435067	179	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7666	False	NA	NA	False	NA	NA	NA	115932259	115924161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
tx.13985	chr4	+	2953	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	112	0	-82	0	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	369	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCCTTCTTGATGATT	NA	False	NA	NA	False	NA	NA	NA	115932577	115954240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
tx.13986	chr4	-	5007	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-12	-389	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	198	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTGTGGGCATGTGT	NA	False	NA	NA	False	NA	NA	NA	115980868	115951849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
tx.13987	chr4	-	5195	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-12	-391	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGTGTGGGCATGT	NA	False	NA	NA	False	NA	NA	NA	115980868	115951851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
tx.13988	chr4	-	5237	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-12	-414	intron_retention	FALSE	canonical	1	19	junction_18	118.034272591366	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	115980868	115951874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
tx.13989	chr4	-	5357	18	FSM	ENSMUSG00000028702.16	ENSMUST00000102704.4	3025	18	-12	-2320	-12	-391	multi-exon	FALSE	canonical	3	379	junction_11	50.1315225199974	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGTGTGGGCATGT	NA	False	NA	NA	False	NA	NA	NA	115980868	115951851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
tx.1399	chr10	-	3935	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	457	-3	-181	3	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	511	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTGCTCTGGTGTGC	NA	False	NA	NA	False	NA	NA	NA	34083254	34027385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
tx.13990	chr4	-	4107	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	14	-1341	-12	-1311	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATAGTCACTGATGCTT	NA	False	NA	NA	False	NA	NA	NA	115980868	115952771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
tx.13991	chr4	-	2873	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-12	20	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_18	115.743916993454	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	NA	False	NA	NA	NA	115980868	115954151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980697
tx.13992	chr4	-	5729	2	FSM	ENSMUSG00000028701.5	ENSMUST00000030469.5	5742	2	13	0	13	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCTTAAGTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	116001793	115989602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_115995032_116001493
tx.13993	chr4	+	2730	22	FSM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	-11	0	-11	0	multi-exon	TRUE	canonical	3	321	junction_9	36.7984644262092	589	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	NA	False	NA	NA	NA	116007703	116017041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
tx.13994	chr4	+	5327	10	FSM	ENSMUSG00000028698.14	ENSMUST00000030464.14	5257	10	-72	2	-29	-2	multi-exon	FALSE	canonical	2	5	junction_9	3.32591767713239	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATTTTTTGGTTTTCTT	3219	False	NA	NA	False	NA	NA	NA	116078785	116160251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116079611_116113364_116113474_116116741_116116841_116127984_116128166_116129935_116130062_116143252_116143396_116144019_116144197_116148871_116148947_116149293_116149465_116156830
tx.13995	chr4	-	5750	29	FSM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-44	-1	-44	0	multi-exon	FALSE	canonical	3	226	junction_2	30.4319246978617	371	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8443	False	NA	NA	False	NA	NA	NA	116321424	116163958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
tx.13996	chr4	-	2404	10	ISM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-39	14595	-39	1076	5prime_fragment	FALSE	canonical	3	250	junction_7	35.0442401177725	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTGGGAGGAACTGAAA	8448	False	NA	NA	False	NA	NA	NA	116321419	116178554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
tx.13997	chr4	-	4438	6	ISM	ENSMUSG00000003810.14	ENSMUST00000106486.8	5723	30	-39	27199	-39	-729	5prime_fragment	FALSE	canonical	3	250	junction_3	29.9639783740411	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGAAACAGGCTTCCCA	8448	False	NA	NA	False	NA	NA	NA	116321419	116191158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
tx.13998	chr4	+	4642	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	63	-2587	60	2579	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTGGAAATGTCAG	NA	False	NA	NA	False	NA	NA	NA	116364808	116398019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
tx.13999	chr4	+	2271	10	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	54	3165	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	22.8958996814325	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTTCTTGAGGG	NA	False	NA	NA	False	NA	NA	NA	116364802	116398605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996_116395118_116398080
tx.14	chr1	+	3897	5	FSM	ENSMUSG00000051285.18	ENSMUST00000182114.8	770	5	17	-3144	17	83	multi-exon	FALSE	canonical	3	49	junction_1	40.8495716011808	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	7159170	7242966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_7159441_7217860_7217964_7231115_7231288_7233471_7233596_7239738
tx.1400	chr10	-	2727	12	FSM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	20.4676725553911	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	NA	False	NA	NA	NA	34294535	34179604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
tx.14000	chr4	+	4604	8	ISM	ENSMUSG00000028696.13	ENSMUST00000030461.5	2115	9	2969	-2579	2969	2579	3prime_fragment	FALSE	canonical	3	65	junction_6	9.03507902905251	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTGGAAATGTCAG	NA	False	NA	NA	False	NA	NA	NA	116367717	116398019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
tx.14001	chr4	+	3545	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	41	2	41	-2	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	459	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTTTTTACTGAAGG	NA	False	NA	NA	False	NA	NA	NA	116414895	116451077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
tx.14002	chr4	+	3287	11	ISM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	11636	0	-9505	0	3prime_fragment	FALSE	canonical	3	268	junction_1	30.0913608864737	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTTTACTGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	116426490	116451079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
tx.14003	chr4	+	3810	5	ISM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	27524	-10	3829	10	3prime_fragment	FALSE	canonical	3	323	junction_1	14.7817454990945	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGGAATTTTTTAGTG	NA	False	NA	NA	False	NA	NA	NA	116442378	116451089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
tx.14004	chr4	-	5121	9	ISM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	18215	0	-3034	0	3prime_fragment	FALSE	canonical	3	1005	junction_7	144.696881445317	50	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTTGTTCTGGAATT	NA	False	NA	NA	False	NA	NA	NA	116466479	116458248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880
tx.14005	chr4	-	2496	10	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	16644	-556	-5049	-1	3prime_fragment	FALSE	canonical	3	898	junction_9	170.844597641277	164	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCCCTTGTTCTGGAAT	NA	False	NA	-42	True	NA	NA	NA	116468494	116458249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599
tx.14006	chr4	-	3090	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	444	-554	0	-3	3prime_fragment	TRUE	canonical	3	774	junction_12	215.450595691155	1252	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGCCCTTGTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	116484694	116458251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
tx.14007	chr4	-	1371	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	49	0	49	0	multi-exon	FALSE	canonical	3	1447	junction_3	104.145331148352	754	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	NA	False	NA	NA	NA	116508828	116493706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
tx.14008	chr4	+	931	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	56	1307	1	243	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	6952	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	116542796	116556712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
tx.14009	chr4	-	239	2	Antisense	novelGene_ENSMUSG00002075917.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	45	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGTTCTGGCAGAAGC	9986	False	NA	NA	False	NA	NA	NA	116641630	116553441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_-_116553631_116641580
tx.1401	chr10	-	2745	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	-3	1	-3	-1	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGTATTATTGAAT	NA	False	NA	NA	False	NA	NA	NA	34294551	34179605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
tx.14010	chr4	-	1878	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	74	154	-44	-154	multi-exon	TRUE	canonical	3	184	junction_2	7.07106781186548	141	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTTGTTTGCCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	116565529	116559629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
tx.14011	chr4	+	1548	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	-335	0	-1	0	multi-exon	FALSE	canonical	3	19	junction_2	20.3239201040316	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	5642	False	NA	NA	False	NA	NA	NA	116565791	116572300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
tx.14012	chr4	+	3030	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	9	-6	9	6	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATTTTGCTGTATA	NA	False	NA	NA	False	NA	NA	NA	116578153	116661445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
tx.14013	chr4	-	2092	8	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	9	0	intron_retention	FALSE	canonical	2	10	junction_7	40.0209129004794	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1982	False	NA	NA	False	NA	NA	NA	116664794	116661198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
tx.14014	chr4	-	2046	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	43	1	9	-1	multi-exon	FALSE	canonical	3	103	junction_2	11.8252583351856	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTTATTTCTTAT	1982	False	NA	NA	False	NA	NA	NA	116664794	116661199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
tx.14015	chr4	+	1645	16	FSM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	9	0	-6	0	multi-exon	FALSE	canonical	3	103	junction_1	29.5893374188894	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGAGAACTTTCTG	NA	False	NA	NA	False	NA	NA	NA	116664928	116676628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
tx.14016	chr4	+	1731	17	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	43.6183286446191	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGAACTTTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	116664938	116676631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
tx.14017	chr4	+	1851	15	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-1	1	intron_retention	FALSE	canonical	3	103	junction_1	29.7890542834451	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAACTTTCTGGGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	116664933	116676636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
tx.14018	chr4	+	1932	16	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-4	3	intron_retention	FALSE	canonical	3	57	junction_1	44.8184485824011	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGAACTTTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	116664940	116676631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
tx.14019	chr4	+	5729	14	FSM	ENSMUSG00000033948.4	ENSMUST00000044823.4	5582	14	-150	3	-150	-3	multi-exon	FALSE	canonical	3	18	junction_2	3.89203404328416	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGTGTTCTCTCA	NA	False	NA	NA	False	NA	NA	NA	116734422	116846458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841879_116842044_116842878_116842961_116843667
tx.1402	chr10	-	2656	11	FSM	ENSMUSG00000039480.15	ENSMUST00000130290.2	1978	11	-22	-656	2	0	multi-exon	FALSE	canonical	2	9	junction_6	26.4469279879535	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	NA	False	NA	NA	NA	34294546	34179604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
tx.14020	chr4	-	1232	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	21	236	-12	16	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGGCTTATGTCCTGA	NA	False	NA	NA	False	NA	NA	NA	116851589	116847397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
tx.14021	chr4	+	3495	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	-2	1090	-2	738	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGCTTTTGGGATCC	NA	False	NA	NA	False	NA	NA	NA	116852511	116861384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
tx.14022	chr4	+	3887	11	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	20	307	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	193.1	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGAATTTTGATGAT	NA	False	NA	NA	False	NA	NA	NA	116876624	116930764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116928138
tx.14023	chr4	+	1531	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	22	2	16	2	multi-exon	TRUE	canonical	3	567	junction_7	49.9305302519377	369	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCTCAGTGGTAG	NA	False	NA	NA	False	NA	NA	NA	116876620	116944047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
tx.14024	chr4	+	4453	22	FSM	ENSMUSG00000028681.12	ENSMUST00000030443.12	4382	22	-71	0	-71	0	multi-exon	FALSE	canonical	3	5	junction_3	13.5888776715328	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGATGGCTGGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	116953200	116972580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_116953625_116954043_116954237_116961929_116962120_116962226_116962297_116962430_116962523_116963131_116963328_116965095_116965218_116965351_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
tx.14025	chr4	+	2520	10	ISM	ENSMUSG00000028681.12	ENSMUST00000144620.8	4356	22	13407	0	-732	0	3prime_fragment	FALSE	canonical	3	29	junction_6	5.35412613473634	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGATGGCTGGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	116966699	116972580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
tx.14026	chr4	-	2662	8	FSM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	-84	-958	23	2	multi-exon	FALSE	canonical	2	11	junction_7	6.73401357108153	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGTCAGCATTCAAGT	9663	False	NA	NA	False	NA	NA	NA	116982899	116976413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135_116981338_116982525
tx.14027	chr4	-	1748	2	ISM	ENSMUSG00000073771.12	ENSMUST00000153924.8	1956	4	1028	0	-37	0	3prime_fragment	FALSE	canonical	3	41	junction_1	0	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAATGTCAGCATTCAA	NA	False	NA	NA	False	NA	NA	NA	116978499	116976415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_116978059_116978394
tx.14028	chr4	-	2415	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	-37	0	-37	0	multi-exon	TRUE	canonical	3	135	junction_10	17.1138146846699	240	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGGCCTTATCATTCC	3182	False	NA	NA	False	NA	NA	NA	116991197	116985851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
tx.14029	chr4	-	1033	5	ISM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	200	7	26	0	3prime_fragment	FALSE	canonical	3	11588	junction_2	904.937705038308	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTAGGTGTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	117013240	117011030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767
tx.1403	chr10	+	2013	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	-8	0	-8	0	multi-exon	TRUE	canonical	3	1084	junction_4	88.4199902429095	1057	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTGTCTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	36850531	36877885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
tx.14030	chr4	-	726	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	126	8	-33	-1	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	1922	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTCTAGGTGTTTGGA	NA	False	NA	NA	False	NA	NA	NA	117013314	117011031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
tx.14031	chr4	-	2801	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	41	0	-6	0	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	471	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCAGATTCTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	117039795	117016835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
tx.14032	chr4	-	1749	10	ISM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	207870	1	-69	0	3prime_fragment	TRUE	canonical	0	0	junction_5	365.792425790136	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9834	False	NA	NA	False	NA	NA	NA	117146379	117128660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222
tx.14033	chr4	-	1961	11	FSM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	-4	-8	-4	0	multi-exon	FALSE	canonical	0	0	junction_5	319.717437747771	774	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9566	False	NA	NA	False	NA	NA	NA	117146647	117128660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
tx.14034	chr4	+	1371	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-34	2	at_least_one_novel_splicesite	TRUE	canonical	3	99	junction_1	225.311693826574	51	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	NA	False	NA	NA	NA	117407527	117531480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
tx.14035	chr4	+	1712	9	FSM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	-9	16	-9	0	multi-exon	FALSE	canonical	3	273	junction_1	182.065535934179	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	NA	False	NA	NA	NA	117407552	117531478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
tx.14036	chr4	+	1706	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	238.585938395371	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	NA	False	NA	NA	NA	117407552	117531478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_117407928_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
tx.14037	chr4	+	3918	8	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	22	0	intron_retention	FALSE	canonical	3	348	junction_1	142.213550259991	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	NA	False	NA	NA	NA	117407583	117531478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
tx.14038	chr4	-	1545	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	21	0	1	0	multi-exon	FALSE	canonical	3	80	junction_10	49.3527101586124	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	NA	False	NA	NA	NA	117539449	117531877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
tx.14039	chr4	-	1566	11	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	72	junction_10	51.6295458047037	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTTTCCTCACTTC	NA	False	NA	NA	False	NA	NA	NA	117539460	117531878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
tx.1404	chr10	-	2610	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	-5	1443	-5	-1443	multi-exon	FALSE	canonical	3	339	junction_1	0	708	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTGTGTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	37014921	37010813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_37012932_37014429
tx.14040	chr4	+	3318	14	FSM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	160	1	-122	-1	multi-exon	FALSE	canonical	2	62	junction_6	13.9750411501337	178	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGATGTGCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	117692407	117726501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
tx.14041	chr4	-	2300	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	12	0	1	0	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	117740672	117730327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
tx.14042	chr4	-	2532	2	ISM	ENSMUSG00000033379.14	ENSMUST00000150204.8	935	7	0	-6	0	-1	intron_retention	FALSE	canonical	3	2592	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	NA	False	NA	NA	NA	117744517	117741523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_117741839_117742300
tx.14043	chr4	-	1049	8	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_7	877.288982709616	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	NA	False	NA	NA	NA	117744519	117741522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743892_117744366
tx.14044	chr4	-	1522	7	ISM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	8	1	-1	-1	intron_retention	FALSE	canonical	3	2536	junction_3	83.3979749287848	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	NA	False	NA	NA	NA	117744518	117741523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786
tx.14045	chr4	-	991	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	8	1	-1	-1	multi-exon	FALSE	canonical	3	2123	junction_7	187.196393650942	681	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	NA	False	NA	NA	NA	117744518	117741523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
tx.14046	chr4	-	2076	4	FSM	ENSMUSG00000033379.14	ENSMUST00000133530.8	646	4	-1427	-3	-1	-1	multi-exon	FALSE	canonical	3	2536	junction_3	23.6690139681023	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	NA	False	NA	NA	NA	117744518	117741523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000
tx.14047	chr4	-	2290	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	1	264	1	0	multi-exon	TRUE	canonical	3	66	junction_1	6.70522184569608	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	NA	False	NA	NA	NA	117749228	117746103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
tx.14048	chr4	-	5367	19	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	2	4	2	-4	intron_retention	FALSE	canonical	3	50	junction_14	10.6920993099728	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGCCTCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	117772194	117751686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969
tx.14049	chr4	-	3602	20	FSM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	-13	6	-13	-6	multi-exon	FALSE	canonical	3	46	junction_19	11.8213853822033	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTCTGCCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	117772209	117751688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
tx.1405	chr10	+	1686	3	NNC	ENSMUSG00000046463.6	novel	1791	3	NA	NA	1376	670	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.5	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATAATTACAATCCT	NA	False	NA	NA	False	NA	NA	NA	37018460	37027981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_37018518_37024872_37025003_37026482
tx.14050	chr4	-	2668	13	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	23.5914297056273	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1851	False	NA	NA	False	NA	NA	NA	117992122	117789350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
tx.14051	chr4	-	2154	8	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	3673	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	28.2004486865448	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	3721	False	NA	NA	False	NA	NA	NA	117821972	117789350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526
tx.14052	chr4	-	2236	12	FSM	ENSMUSG00000028538.13	ENSMUST00000106410.8	2225	12	-11	0	-11	0	multi-exon	FALSE	canonical	3	30	junction_11	18.1899981599189	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTCCTGTTGTTTTC	1851	False	NA	NA	False	NA	NA	NA	117992122	117789354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991930
tx.14053	chr4	-	2243	12	NIC	ENSMUSG00000028538.13	novel	2225	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	26.8084728187943	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTCCTGTTGTTTTC	1880	False	NA	NA	False	NA	NA	NA	117992093	117789354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
tx.14054	chr4	-	2574	12	FSM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	-24	-1	0	1	multi-exon	FALSE	canonical	3	35	junction_11	17.3052325722645	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1862	False	NA	NA	False	NA	NA	NA	117992111	117789349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
tx.14055	chr4	-	2509	11	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	21.0437639218843	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1878	False	NA	NA	False	NA	NA	NA	117992095	117789350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
tx.14056	chr4	-	2202	11	FSM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	-53	-6	-21	0	multi-exon	FALSE	canonical	3	26	junction_9	21.8286508973871	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1841	False	NA	NA	False	NA	NA	NA	117992132	117789350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
tx.14057	chr4	-	4542	22	NIC	ENSMUSG00000033326.16	novel	4550	22	NA	NA	-18	8	combination_of_known_splicesites	FALSE	canonical	3	25	junction_21	14.8531740730846	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTACCTTGTCCTTAGC	NA	False	NA	NA	False	NA	NA	NA	118036869	117994194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118036798
tx.14058	chr4	-	4634	22	FSM	ENSMUSG00000033326.16	ENSMUST00000106406.9	4663	22	25	4	25	-2	multi-exon	FALSE	canonical	3	48	junction_21	11.6270464270502	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGATTGACTGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	118037215	117994157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118037089
tx.14059	chr4	-	4776	19	ISM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	65125	1	4820	-1	3prime_fragment	TRUE	canonical	3	364	junction_16	50.0634473985971	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTCTGTCTCAGCTCCT	8297	False	NA	NA	False	NA	NA	NA	118083477	118065410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995
tx.1406	chr10	+	2524	15	ISM	ENSMUSG00000019846.12	ENSMUST00000019992.6	6046	38	25	48664	-13	3857	5prime_fragment	FALSE	canonical	0	0	junction_6	2.71052370871575	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTGAGGAATAAATAATAT	NA	False	NA	NA	False	NA	NA	NA	38841535	38937520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349
tx.14060	chr4	-	6229	25	ISM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	55035	3	75	-3	3prime_fragment	FALSE	canonical	3	357	junction_20	54.2148343526833	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCCTCTGTCTCAGCTC	NA	False	NA	NA	False	NA	NA	NA	118093567	118065412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109
tx.14061	chr4	-	7628	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	25	3	25	-3	multi-exon	FALSE	canonical	3	357	junction_20	50.8611774834205	357	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCCTCTGTCTCAGCTC	NA	False	NA	NA	False	NA	NA	NA	118148577	118065412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
tx.14062	chr4	-	5571	23	ISM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	56364	4	975	-4	3prime_fragment	FALSE	canonical	3	357	junction_20	52.6746014352613	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTCTGTCTCAGCT	NA	False	NA	NA	False	NA	NA	NA	118092238	118065413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155
tx.14063	chr4	-	10963	72	NNC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_27	9.40254516523104	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTCAGTGTGATTTTAAT	3261	False	NA	NA	False	NA	NA	NA	118266472	118219940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235066_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245338_118245504_118245600_118245740_118245912_118246119_118246234_118246330_118246446_118246569_118246739_118246971_118247067_118247254_118247334_118247678_118247895_118247970_118248186_118248372_118248488_118248596_118248750_118248913_118249057_118249752_118249883_118250010_118250246_118250642_118250814_118251016_118251228_118254809_118254917_118255310_118255453_118256227_118256360_118259599_118259771_118260017_118260192_118262622_118262749_118266359
tx.14064	chr4	+	1164	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	-19	0	-2	0	multi-exon	FALSE	canonical	3	450	junction_1	88.2754527349226	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	NA	False	NA	NA	NA	118266543	118272308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
tx.14065	chr4	+	1130	6	ISM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	1513	0	531	0	3prime_fragment	FALSE	canonical	3	642	junction_1	31.4388294947506	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	NA	False	NA	NA	NA	118268075	118272308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
tx.14066	chr4	+	1456	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	17	338	-9	2	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	118285306	118289812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
tx.14067	chr4	-	1774	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	19	0	19	0	multi-exon	TRUE	canonical	3	1043	junction_4	200.755117703013	1713	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	118294530	118290097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
tx.14068	chr4	+	1125	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	44	1791	-5	367	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	1213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGGTTAAAACCAGAT	NA	False	NA	NA	False	NA	NA	NA	118478039	118483182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
tx.14069	chr4	+	2518	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	89	653	-4	0	multi-exon	TRUE	canonical	3	565	junction_3	58.8236535946402	1242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	665	False	NA	NA	False	NA	NA	NA	118965996	118994527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
tx.1407	chr10	+	2643	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-30	316	17	-316	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	191	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTACATAAAATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	39009988	39026738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
tx.14070	chr4	+	2041	7	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	23779	653	23576	0	3prime_fragment	FALSE	canonical	3	609	junction_2	51.6260593111657	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	2216	False	NA	NA	False	NA	NA	NA	118989686	118994527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
tx.14071	chr4	-	1588	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	-3	3	-3	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTGTACTTATTTGG	NA	False	NA	NA	False	NA	NA	NA	119031395	119026712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_119028240_119031334
tx.14072	chr4	+	677	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	56	0	-45	0	multi-exon	FALSE	canonical	3	443	junction_2	4.5	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	NA	False	NA	NA	NA	119052558	119058495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_119052684_119053068_119053219_119058093
tx.14073	chr4	-	5039	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	21	2091	-6	-2091	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATCTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119089888	119079129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
tx.14074	chr4	+	4963	2	NNC	ENSMUSG00000085626.2	novel	642	2	NA	NA	-2628	896	intron_retention	FALSE	canonical	3	41	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTAGGATGGACACATA	5659	False	NA	NA	False	NA	NA	NA	119077742	119082908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_119079097_119079299
tx.14075	chr4	-	4946	4	NIC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-1	-2063	intron_retention	FALSE	canonical	3	29	junction_3	165.023903992388	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACCTTGCTGGCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	119089883	119079101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089779
tx.14076	chr4	-	7087	5	NNC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	12	junction_4	164.079820514285	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTTGTTCCCCGACT	NA	False	NA	NA	False	NA	NA	NA	119089887	119077038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089821
tx.14077	chr4	+	3594	14	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-27	0	intron_retention	FALSE	canonical	3	347	junction_5	36.3414119820911	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	119090084	119106170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119104404_119104641_119104783_119105087
tx.14078	chr4	+	3207	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	-18	-1	-18	0	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	643	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	119090093	119106170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
tx.14079	chr4	-	1524	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	104	0	0	0	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	7408	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	NA	NA	NA	119151697	119135177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
tx.1408	chr10	+	3505	13	NIC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	33.9276190342519	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	39245746	39441368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_39246187_39271000_39271041_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
tx.14080	chr4	-	772	10	FSM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	-15	0	0	0	multi-exon	TRUE	canonical	2	32	junction_8	169.629516415942	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9629	False	NA	NA	False	NA	NA	NA	119177696	119157206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
tx.14081	chr4	-	1652	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	-11	-353	2	-222	multi-exon	FALSE	canonical	2	32	junction_8	172.260640876149	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATACCGTGAGCCTTTCT	9633	False	NA	NA	False	NA	NA	NA	119177692	119164003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
tx.14082	chr4	-	1858	9	NIC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	4.28478412525065	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGTGTTAGTAATTT	9732	False	NA	NA	False	NA	NA	NA	119272709	119209443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_119209850_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
tx.14083	chr4	-	1423	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	20	0	20	0	multi-exon	FALSE	canonical	3	273	junction_2	22	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGTTTCTGGTTTTTT	5525	False	NA	NA	False	NA	NA	NA	119279597	119275726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_119276491_119278776_119278881_119279042
tx.14084	chr4	-	4100	5	FSM	ENSMUSG00000048899.9	ENSMUST00000049994.8	4097	5	-3	0	-3	0	multi-exon	TRUE	canonical	3	32	junction_2	4.35889894354067	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTCCTATGTCTTGTCT	9970	False	NA	NA	False	NA	NA	NA	119349828	119322479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_119325723_119327663_119327868_119331715_119331803_119334987_119335219_119349493
tx.14085	chr4	+	4698	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	-38	0	-11	0	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	119396846	119486316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
tx.14086	chr4	+	4793	13	FSM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	-4	0	-4	0	multi-exon	FALSE	canonical	3	55	junction_6	28.6078611962206	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	119396853	119486316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
tx.14087	chr4	-	3004	2	FSM	ENSMUSG00000052135.9	ENSMUST00000102656.4	2615	2	-389	0	-389	0	multi-exon	FALSE	canonical	3	61	junction_1	0	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGCCTTGGGTTAGGA	NA	False	NA	NA	False	NA	NA	NA	120144935	120124275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_120126380_120144035
tx.14088	chr4	+	3448	17	FSM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	-94	-1	-68	1	multi-exon	FALSE	canonical	3	47	junction_13	8.94776508408664	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGTCTTTTTAACCAGT	NA	False	NA	NA	False	NA	NA	NA	120262409	120387382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
tx.14089	chr4	+	4998	13	FSM	ENSMUSG00000000085.17	ENSMUST00000106298.10	1995	13	-2075	-928	-2075	1	multi-exon	FALSE	canonical	3	47	junction_9	9.9537123169644	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTTTTTAACCAGTTG	NA	False	NA	NA	False	NA	NA	NA	120317201	120387384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
tx.1409	chr10	+	3558	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	-5	9	-5	0	multi-exon	FALSE	canonical	3	31	junction_8	31.8009712925239	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	39245754	39441368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
tx.14090	chr4	-	3477	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	303	0	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_18	179.180610999139	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	120427170	120397064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120426272
tx.14091	chr4	-	2720	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	-15	0	-15	0	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	1189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	120427488	120397064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
tx.14092	chr4	-	2078	10	NNC	ENSMUSG00000032897.18	novel	2006	10	NA	NA	475	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_9	131.604720542752	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	NA	False	NA	NA	NA	120682406	120614634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682083
tx.14093	chr4	-	1962	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	-30	0	-29	0	multi-exon	FALSE	canonical	3	393	junction_8	23.5424491839793	387	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	NA	False	NA	NA	NA	120682933	120614634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
tx.14094	chr4	+	6520	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	-18	3	-15	-3	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTATGGCTTTCTGAG	NA	False	NA	NA	False	NA	NA	NA	120711997	120753773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
tx.14095	chr4	+	1852	4	FSM	ENSMUSG00000032890.18	ENSMUST00000132895.8	2099	4	11	236	8	-236	multi-exon	FALSE	canonical	3	46	junction_3	1.24721912892465	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTACACATCCTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	120712023	120741405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271
tx.14096	chr4	-	2002	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	-8	2	4	-2	multi-exon	FALSE	canonical	3	95	junction_1	0	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGACTTGATGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	120782210	120778394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_120779894_120781707
tx.14097	chr4	-	2417	6	FSM	ENSMUSG00000064141.15	ENSMUST00000106280.8	2362	6	-52	-3	-52	3	multi-exon	FALSE	canonical	3	8	junction_2	16.2898741554378	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTTACAGATTAGTAT	6784	False	NA	NA	False	NA	NA	NA	120808948	120787330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_120788704_120791529_120791629_120792263_120792391_120804485_120804767_120806528_120806758_120808640
tx.14098	chr4	-	2395	6	NIC	ENSMUSG00000064141.15	novel	2362	6	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	13.3476589707709	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGATTTACAGATTAG	6800	False	NA	NA	False	NA	NA	NA	120808932	120787333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_120788704_120791529_120791626_120792263_120792391_120804485_120804767_120806528_120806758_120808640
tx.14099	chr4	-	2898	10	FSM	ENSMUSG00000032870.9	ENSMUST00000043200.8	2905	10	2	5	2	-5	multi-exon	TRUE	canonical	3	186	junction_3	19.2841007882109	328	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTGCTCGGCTGTCA	NA	False	NA	NA	False	NA	NA	NA	120874442	120825518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
tx.1410	chr10	+	3566	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-38	0	-4	0	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	39245755	39441368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
tx.14100	chr4	-	201	2	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATAAGGATGCTGAAG	8632	False	NA	NA	False	NA	NA	NA	120971463	120855854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_120856008_120971415
tx.14101	chr4	+	2694	32	FSM	ENSMUSG00000028626.6	ENSMUST00000030372.6	2924	32	227	3	-136	-3	multi-exon	FALSE	canonical	3	39	junction_2	8.6239508704552	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTCTTGTGGATG	NA	False	NA	NA	False	NA	NA	NA	120896808	120912516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
tx.14102	chr4	+	2622	31	NIC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-136	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	12.6901536633722	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTTGTGGATGAGG	NA	False	NA	NA	False	NA	NA	NA	120896808	120912519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_120896984_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
tx.14103	chr4	+	3163	30	ISM	ENSMUSG00000028626.6	ENSMUST00000030372.6	2924	32	2194	-1	1831	1	3prime_fragment	FALSE	canonical	3	40	junction_15	8.24000854276135	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCTTGTGGATGAGGA	NA	False	NA	NA	False	NA	NA	NA	120898775	120912520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
tx.14104	chr4	-	3420	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	9	0	9	0	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	284	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	120955429	120916433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
tx.14105	chr4	-	6248	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	-7	1	-7	-1	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTTACTCATAGAGTC	6457	False	NA	NA	False	NA	NA	NA	121072288	121003080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
tx.14106	chr4	+	2290	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	5	86	1	-86	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	311	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTATCATTTTCAGTA	NA	False	NA	NA	False	NA	NA	NA	122730039	122752785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
tx.14107	chr4	-	2570	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	190	8	-2	-8	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	646	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	NA	False	NA	NA	NA	122779659	122752847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
tx.14108	chr4	-	2573	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	156	8	23	-8	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	475	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	NA	False	NA	NA	NA	122779681	122752847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
tx.14109	chr4	+	3196	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	97	0	-58	0	multi-exon	FALSE	canonical	3	37	junction_1	34.5	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	3568	False	NA	NA	False	NA	NA	NA	122889833	122896278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_122889944_122890306_122890812_122893697
tx.1411	chr10	+	2087	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	298	482	298	0	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTTATCTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	39489227	39530821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
tx.14110	chr4	+	3537	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	-36	0	-36	0	multi-exon	FALSE	canonical	3	106	junction_1	0	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	3590	False	NA	NA	False	NA	NA	NA	122889855	122896278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_122890812_122893697
tx.14111	chr4	+	2060	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	2	12	2	-12	multi-exon	FALSE	canonical	3	89	junction_3	10.336343647538	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTTCTATACAGCATGC	NA	False	NA	NA	False	NA	NA	NA	122910391	122948730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
tx.14112	chr4	-	1213	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_6	303.134000439116	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	NA	False	NA	NA	NA	123033739	123020908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030633_123030692_123031318_123031363_123032658_123032758_123033694
tx.14113	chr4	-	1139	9	ISM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	986	0	60	0	3prime_fragment	TRUE	canonical	3	964	junction_1	52.992776630405	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	123032758	123020907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658
tx.14114	chr4	-	1182	10	FSM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	5	1	5	-1	multi-exon	FALSE	canonical	3	832	junction_9	90.3078411481501	513	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	NA	False	NA	NA	NA	123033739	123020908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
tx.14115	chr4	-	2377	9	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	832	junction_8	93.9161860384034	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	123033739	123020907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123030692_123031318_123031363_123032658_123032758_123033694
tx.14116	chr4	+	3092	15	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_14	92.6910602650613	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTGAATTTGATGCCA	NA	False	NA	-66	True	NA	NA	NA	123176578	123192615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
tx.14117	chr4	+	3047	14	FSM	ENSMUSG00000011257.20	ENSMUST00000106243.8	3111	14	-39	103	-39	0	multi-exon	FALSE	canonical	3	64	junction_10	102.125111806737	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTGAATTTGATGCCA	NA	False	NA	-66	True	NA	NA	NA	123176578	123192615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191887_123192305
tx.14118	chr4	+	3136	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	-125	8	-39	2	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAATTTGATGCCAGT	NA	False	NA	-66	True	NA	NA	NA	123176578	123192617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
tx.14119	chr4	+	3086	15	FSM	ENSMUSG00000011257.20	ENSMUST00000106241.8	3050	15	-46	10	-39	0	multi-exon	FALSE	canonical	3	39	junction_10	103.994922364272	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTGAATTTGATGCCA	NA	False	NA	-66	True	NA	NA	NA	123176578	123192615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
tx.1412	chr10	-	2710	4	FSM	ENSMUSG00000087177.8	ENSMUST00000149830.8	660	4	137	-2187	-20	1619	multi-exon	FALSE	canonical	1	1	junction_2	9.56846672960488	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGCATGTGTCCTTCT	5795	False	NA	NA	False	NA	NA	NA	39607865	39528273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_39530685_39531835_39531926_39557468_39557546_39607733
tx.14120	chr4	-	5238	7	NNC	ENSMUSG00000032726.13	novel	1917	7	NA	NA	-147	3205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.28964257620968	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTCTTTTGGGATT	NA	False	NA	NA	False	NA	NA	NA	123236743	123203232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218472_123218891_123219082_123236176
tx.14121	chr4	-	5268	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-147	-3204	-147	3204	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTCTTCTTTTGGGAT	NA	False	NA	NA	False	NA	NA	NA	123236743	123203233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
tx.14122	chr4	+	2636	3	NNC	ENSMUSG00000087307.2	novel	431	2	NA	NA	-2631	2072	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	12.5	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCAGTGTGACGGTTG	NA	False	NA	NA	False	NA	NA	NA	123557042	123567082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_123557174_123561406_123561541_123564711
tx.14123	chr4	-	204	2	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	78	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAAATGTTTGGTGA	9253	False	NA	NA	False	NA	NA	NA	123604574	123582671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_123582825_123604523
tx.14124	chr4	-	526	3	FSM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	1318	junction_2	395	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1831	False	NA	NA	False	NA	NA	NA	123611996	123606502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_123606720_123609656_123609875_123611905
tx.14125	chr4	-	2194	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	60	798	-54	-798	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	709	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCCTTCTTGATGCTGT	NA	False	NA	NA	False	NA	NA	NA	123644078	123629149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
tx.14126	chr4	+	1433	7	FSM	ENSMUSG00000043333.13	ENSMUST00000106204.2	1120	7	-17	-296	-17	296	multi-exon	FALSE	canonical	3	17	junction_1	3.97562014729219	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGACTCTTGCTTCC	NA	False	NA	NA	False	NA	NA	NA	123703689	123723993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_123703970_123708035_123708185_123711656_123711770_123716549_123716651_123718653_123718715_123720630_123720693_123723326
tx.14127	chr4	+	1501	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	171	13	-38	-13	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTGTTAATCCTTTT	NA	False	NA	NA	False	NA	NA	NA	123798795	123806049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
tx.14128	chr4	+	2583	7	FSM	ENSMUSG00000028646.17	ENSMUST00000030399.7	2593	7	6	4	6	0	multi-exon	FALSE	canonical	3	488	junction_1	23.3553467587664	586	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	123811244	123830786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
tx.14129	chr4	-	4532	2	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAATTGCCTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	124252170	124246967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_124247180_124247850
tx.1413	chr10	-	2751	3	NIC	ENSMUSG00000087177.8	novel	660	4	NA	NA	1	1614	intron_retention	FALSE	canonical	3	9	junction_1	7	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCATGTGTC	5659	False	NA	NA	False	NA	NA	NA	39608001	39528278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_39530685_39557468_39557546_39607733
tx.14130	chr4	-	453	2	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	373	junction_1	0	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	124252215	124246965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_124247180_124251976
tx.14131	chr4	-	993	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	6	604	6	33	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	539	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGATGTCTTTCTATG	NA	False	NA	NA	False	NA	NA	NA	124587387	124572556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
tx.14132	chr4	+	1759	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	41	20	41	-20	multi-exon	FALSE	canonical	3	1027	junction_12	104.342509913266	951	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTTCTGAAACCC	NA	False	NA	NA	False	NA	NA	NA	124608609	124626233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
tx.14133	chr4	+	3005	18	ISM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	9737	1	9709	-1	3prime_fragment	FALSE	canonical	3	118	junction_11	23.4933547256022	226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGGTTCTCTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	124645379	124695303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
tx.14134	chr4	+	792	2	FSM	ENSMUSG00000028890.14	ENSMUST00000147452.2	781	2	-8	-3	-8	3	multi-exon	FALSE	canonical	3	116	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTCATGTTTATACTG	344	False	NA	NA	False	NA	NA	NA	124696366	124699174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124696437_124698452
tx.14135	chr4	+	3631	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	15	3985	15	-3564	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGCCTTTGGCTCCTGG	334	False	NA	NA	False	NA	NA	NA	124696356	124739608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
tx.14136	chr4	+	2721	11	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	15	-4471	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	26.0967430918113	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGGTACTGCCCATC	334	False	NA	NA	False	NA	NA	NA	124696356	124738701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736323_124736385_124737939
tx.14137	chr4	-	1310	2	FSM	ENSMUSG00000078570.11	ENSMUST00000137769.3	659	2	-154	-497	34	31	multi-exon	FALSE	canonical	3	201	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCACCAAGACCACTGG	7758	False	NA	NA	False	NA	NA	NA	124744420	124742841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_124743756_124744024
tx.14138	chr4	-	754	3	FSM	ENSMUSG00000078570.11	ENSMUST00000125776.8	761	3	2	5	2	-1	multi-exon	FALSE	canonical	3	59	junction_2	71	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTGACTGACCTTTCT	7726	False	NA	NA	False	NA	NA	NA	124744452	124743283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_124743756_124744024_124744227_124744372
tx.14139	chr4	-	1206	3	FSM	ENSMUSG00000078570.11	ENSMUST00000185036.2	1223	3	17	0	17	0	multi-exon	FALSE	canonical	3	65	junction_2	68	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGACTGACCTTTCTT	7206	False	NA	NA	False	NA	NA	NA	124744972	124743282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_124743756_124744024_124744227_124744441
tx.1414	chr10	-	2739	3	NIC	ENSMUSG00000087177.8	novel	660	4	NA	NA	0	1612	intron_retention	FALSE	canonical	0	0	junction_2	2.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATAGTGGAGCATGTG	5682	False	NA	NA	False	NA	NA	NA	39607978	39528280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_39530685_39531835_39531926_39607733
tx.14140	chr4	-	749	3	FSM	ENSMUSG00000078570.11	ENSMUST00000106190.10	968	3	214	5	66	0	multi-exon	FALSE	canonical	3	24	junction_2	88.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGACTGACCTTTCTT	7790	False	NA	NA	False	NA	NA	NA	124744388	124743282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_124743756_124744024_124744227_124744314
tx.14141	chr4	+	2078	4	FSM	ENSMUSG00000028889.18	ENSMUST00000144851.3	724	4	-587	-767	85	3	multi-exon	FALSE	canonical	3	495	junction_1	37.6061460697879	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGGTTTATTTTTCTT	1619	False	NA	NA	False	NA	NA	NA	124744556	124749038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124745601_124745692_124745813_124747666_124747810_124748267
tx.14142	chr4	+	1548	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	84	2	84	-2	multi-exon	FALSE	canonical	3	475	junction_1	43.7121264639459	453	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTAAATGGTTTATTT	1618	False	NA	NA	False	NA	NA	NA	124744555	124749033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
tx.14143	chr4	+	4025	2	NIC	ENSMUSG00000028889.18	novel	512	3	NA	NA	79	-2	intron_retention	FALSE	canonical	3	545	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTAAATGGTTTATTT	1613	False	NA	NA	False	NA	NA	NA	124744550	124749033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_124747810_124748267
tx.14144	chr4	-	3014	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	-118	-169	-118	169	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAGTCAAGATTTTA	NA	False	NA	NA	False	NA	NA	NA	124756082	124748862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
tx.14145	chr4	-	1608	10	FSM	ENSMUSG00000028873.17	ENSMUST00000084296.10	1626	10	16	2	16	-2	multi-exon	FALSE	canonical	3	1430	junction_6	123.940846105444	1011	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCTCGGTCATCTGCA	NA	False	NA	NA	False	NA	NA	NA	124830694	124812259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
tx.14146	chr4	+	2844	6	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	-2	3	intron_retention	FALSE	non_canonical	3	26	junction_1	9.3936148526539	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTTGGTAAATATATTA	NA	False	NA	NA	False	NA	NA	NA	124830848	124838452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_124830884_124830971_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
tx.14147	chr4	+	2343	16	FSM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	26	-3	26	-1	multi-exon	FALSE	canonical	3	650	junction_4	51.4673575083168	978	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTGTGTTCGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	124923810	124949172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
tx.14148	chr4	+	2321	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	21	3	-9	-3	multi-exon	FALSE	canonical	3	77	junction_1	6.84754619472471	152	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTAGAGGGTATTACT	NA	False	NA	NA	False	NA	NA	NA	124960485	124967832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
tx.14149	chr4	+	889	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	-10	-7	7	7	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGCCTCTTTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	124978933	125003689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
tx.1415	chr10	+	7828	20	ISM	ENSMUSG00000019841.16	ENSMUST00000164763.8	10399	33	89665	3	-3102	-3	3prime_fragment	FALSE	canonical	3	42	junction_1	14.1117424238904	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGTGCTATGACTTT	NA	False	NA	NA	False	NA	NA	NA	39698024	39751199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
tx.14150	chr4	+	1010	6	NIC	ENSMUSG00000028863.14	novel	872	6	NA	NA	2	379	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	120.208818312135	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCATCAACAGATTCTT	NA	False	NA	NA	False	NA	NA	NA	124978945	124997675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_124997222
tx.14151	chr4	+	4522	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	25	3	-5	-3	multi-exon	TRUE	canonical	3	173	junction_5	63.7427555796648	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAACTGCTGATACTGA	NA	False	NA	NA	False	NA	NA	NA	124978951	125007028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
tx.14152	chr4	+	1240	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	-5	-181	-5	6	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGCCTCTTTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	124978951	125003688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
tx.14153	chr4	-	2798	6	FSM	ENSMUSG00000042677.8	ENSMUST00000036188.8	2755	6	-43	0	-43	0	multi-exon	FALSE	canonical	2	13	junction_5	0.748331477354788	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGCCAGTCGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	125021676	125012215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_125013938_125014118_125014226_125014664_125014900_125016046_125016187_125020398_125020876_125021559
tx.14154	chr4	+	2983	7	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	-4	4	intron_retention	FALSE	canonical	3	1282	junction_6	49.8745648825353	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGGAAGATGGCCTT	NA	False	NA	NA	False	NA	NA	NA	125940765	125949329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125947352_125948753_125948946_125949172
tx.14155	chr4	+	892	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	49	-4	-3	4	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGGAAGATGGCCTT	NA	False	NA	NA	False	NA	NA	NA	125940766	125949329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
tx.14156	chr4	+	1470	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	12	3531	12	0	multi-exon	FALSE	canonical	3	15	junction_8	4.26296135405575	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTTCCCCATTATTCTC	2375	False	NA	NA	False	NA	NA	NA	125952369	125982457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
tx.14157	chr4	+	866	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	77	0	40	0	multi-exon	FALSE	canonical	3	289	junction_1	0	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTGCCTGATGCCCTG	NA	False	NA	NA	False	NA	NA	NA	125990492	125992377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_125990603_125991621
tx.14158	chr4	+	3493	11	FSM	ENSMUSG00000042608.16	ENSMUST00000094761.11	3492	11	-3	2	-3	-1	multi-exon	TRUE	canonical	3	325	junction_5	16.9944108459223	646	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTGTAGCCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	125997761	126034820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_125997940_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
tx.14159	chr4	+	1212	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	-58	-10	-58	0	multi-exon	FALSE	canonical	3	339	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	7072	False	NA	NA	False	NA	NA	NA	126042266	126043668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_126042839_126043028
tx.1416	chr10	+	4569	19	ISM	ENSMUSG00000019841.16	ENSMUST00000164763.8	10399	33	95382	-4	-528	-1	3prime_fragment	FALSE	canonical	3	48	junction_8	13.1444961020869	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTATGACTTTTATCTTA	NA	False	NA	NA	False	NA	NA	NA	39703741	39751206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
tx.14160	chr4	+	890	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	472	2	-57	-1	multi-exon	FALSE	canonical	3	244	junction_1	47.5	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGTCTCTCACTGGTT	7073	False	NA	NA	False	NA	NA	NA	126042267	126043666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_126042425_126042743_126042839_126043028
tx.14161	chr4	+	957	3	FSM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	731	1	-57	-1	multi-exon	FALSE	canonical	3	53	junction_1	143	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGTCTCTCACTGGTT	7073	False	NA	NA	False	NA	NA	NA	126042267	126043666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_126042425_126042676_126042839_126043028
tx.14162	chr4	-	3070	8	ISM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	24263	0	29	0	3prime_fragment	FALSE	canonical	3	676	junction_7	73.4141175324012	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	126072290	126057874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654
tx.14163	chr4	-	3882	9	ISM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	22097	0	-516	0	3prime_fragment	FALSE	canonical	3	676	junction_7	72.7147681011223	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	126074456	126057874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704
tx.14164	chr4	-	4365	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	800	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6775	False	NA	NA	False	NA	NA	NA	126096452	126057874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
tx.14165	chr4	-	4278	11	FSM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	100	0	-1	0	multi-exon	FALSE	canonical	3	431	junction_10	137.634443363571	425	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6774	False	NA	NA	False	NA	NA	NA	126096453	126057874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
tx.14166	chr4	-	3850	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	68	junction_7	237.221554913761	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGACTGTGTTTGTTGCTT	6776	False	NA	NA	False	NA	NA	NA	126096451	126057875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
tx.14167	chr4	-	3156	17	FSM	ENSMUSG00000028849.18	ENSMUST00000106132.3	3195	17	39	0	-21	0	multi-exon	FALSE	canonical	3	46	junction_12	60.9301598143317	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	NA	False	NA	NA	NA	126150097	126125959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
tx.14168	chr4	-	3374	17	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	28	0	intron_retention	FALSE	canonical	3	52	junction_12	62.4189474438652	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	NA	False	NA	NA	NA	126150108	126125959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
tx.14169	chr4	-	3271	18	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_13	63.2753635019	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	NA	False	NA	NA	NA	126150101	126125959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
tx.1417	chr10	-	3520	4	FSM	ENSMUSG00000096687.9	ENSMUST00000178563.3	3528	4	3	5	3	-5	multi-exon	FALSE	canonical	2	5	junction_3	4.98887651569859	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTGTTGACTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	39775231	39766013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_39768926_39770011_39770129_39770767_39770937_39774909
tx.14170	chr4	-	3261	16	NIC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	30	0	intron_retention	FALSE	canonical	3	46	junction_11	59.2617545770926	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	NA	False	NA	NA	NA	126150106	126125959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
tx.14171	chr4	+	1284	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	50	2	-25	-2	multi-exon	FALSE	canonical	3	345	junction_3	21.2882009573378	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTGTCCTGTTTTCCTT	7675	False	NA	NA	False	NA	NA	NA	126156167	126169674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
tx.14172	chr4	-	1659	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	12	1	12	-1	multi-exon	FALSE	canonical	3	286	junction_3	41.9218320210365	316	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTCCTGTTCCTGTCT	7088	False	NA	NA	False	NA	NA	NA	126215484	126209840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
tx.14173	chr4	-	2960	18	ISM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	8	13675	-7	-830	5prime_fragment	FALSE	canonical	2	3	junction_5	10.554849325815	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACAGAGTGTGATTTCT	2372	False	NA	NA	False	NA	NA	NA	126323341	126240199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
tx.14174	chr4	-	1319	7	NIC	ENSMUSG00000028842.16	novel	625	4	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	7.32006375199925	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTCCTTTCATAAT	2372	False	NA	NA	False	NA	NA	NA	126323341	126269469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_126269734_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
tx.14175	chr4	-	7320	19	FSM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	-46	-47	-46	47	multi-exon	FALSE	canonical	2	5	junction_8	3.48364786813131	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATCTCTCATAGGTT	NA	False	NA	NA	False	NA	NA	NA	126362422	126328757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
tx.14176	chr4	-	4538	2	NNC	ENSMUSG00000041530.18	novel	588	2	NA	NA	-3597	379	intron_retention	FALSE	non_canonical	0	0	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTCTGATGTCTAGGT	NA	False	NA	NA	False	NA	NA	NA	126340751	126336013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_126339368_126339567
tx.14177	chr4	+	5296	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	22	11	intron_retention	FALSE	canonical	1	26	junction_4	21.999842171151	40	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTAGTGGTCATTTCTTC	NA	False	NA	NA	False	NA	NA	NA	126450749	126487707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
tx.14178	chr4	+	5040	26	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-29	5	combination_of_known_junctions	FALSE	canonical	1	26	junction_4	22.9307130285999	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCTCTAGTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	126450758	126487701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
tx.14179	chr4	+	821	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	37	1	-12	-1	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	923	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCTGGGTTTGGCCTT	5417	False	NA	NA	False	NA	NA	NA	126571459	126603506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
tx.1418	chr10	-	5393	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	2	2	2	-2	multi-exon	FALSE	canonical	3	11	junction_2	3.87814388593306	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTGTGATTGTGTTT	7145	False	NA	NA	False	NA	NA	NA	40018248	39909529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
tx.14180	chr4	-	4567	6	ISM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	-6	9	-6	-9	intron_retention	FALSE	canonical	3	191	junction_5	19.3225257148231	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCCTCCTTTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	126647208	126637551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733
tx.14181	chr4	-	3683	7	FSM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	-10	8	8	-8	multi-exon	FALSE	canonical	3	145	junction_6	31.1216252074913	329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCTCCTTTGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	126647212	126637550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763
tx.14182	chr4	-	3335	7	FSM	ENSMUSG00000028833.14	ENSMUST00000127079.2	2375	7	13	-973	2	-8	multi-exon	FALSE	canonical	3	56	junction_6	61.3969326052477	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCTCCTTTGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	126647218	126637550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126647117
tx.14183	chr4	+	4204	21	NIC	ENSMUSG00000028830.15	novel	4384	21	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.138031576133	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	126647592	126748129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_126647639_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
tx.14184	chr4	+	4355	21	FSM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	29	0	5	0	multi-exon	FALSE	canonical	2	36	junction_1	9.66643677887566	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	126647591	126748129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
tx.14185	chr4	-	7186	30	FSM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-87	3	-87	-3	multi-exon	FALSE	canonical	3	101	junction_15	43.6375461501576	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGTGAGTTCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	126862015	126755734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
tx.14186	chr4	-	7187	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-91	-3	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_15	36.0808643919119	196	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGTGAGTTCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	126862019	126755734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
tx.14187	chr4	+	3026	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-2	441	-2	-441	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	1268	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTTCATGTATTACTT	NA	False	NA	NA	False	NA	NA	NA	126915114	126924588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
tx.14188	chr4	+	3620	4	Fusion	ENSMUSG00000028820.14_ENSMUSG00000085334.8	novel	574	3	NA	NA	2957	0	multi-exon	FALSE	canonical	3	45	junction_1	134.514765814844	19	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	NA	False	NA	NA	NA	126923194	126930806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr4_+_126926599_126929600_126929648_126930355_126930443_126930724
tx.14189	chr4	+	4029	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	-3455	0	-1736	0	multi-exon	FALSE	canonical	3	313	junction_2	16	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	NA	False	NA	NA	NA	126925787	126930806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_126929648_126930355_126930443_126930724
tx.1419	chr10	-	4393	4	ISM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	65539	5	-110	-5	3prime_fragment	FALSE	canonical	3	11	junction_2	4.18993502999218	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGATCTTGTGATTGTG	7552	False	NA	NA	False	NA	NA	NA	39952711	39909532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559
tx.14190	chr4	-	3539	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	14	7	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	172.979586945975	33	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAAGTTTTGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	126954931	126941378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951193_126951387_126952585_126952825_126953302_126953453_126954788
tx.14191	chr4	-	3346	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	14	492	14	7	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	566	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAAGTTTTGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	126954931	126941378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
tx.14192	chr4	-	3395	8	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	19	4	combination_of_known_junctions	FALSE	canonical	2	13	junction_7	138.51633661848	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATGAAGTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	126954898	126941381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954703
tx.14193	chr4	-	4008	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	6	4	intron_retention	FALSE	canonical	3	376	junction_5	28.9333525345558	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATGAAGTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	126954939	126941381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
tx.14194	chr4	+	4188	15	FSM	ENSMUSG00000042408.14	ENSMUST00000046751.13	4210	15	13	9	-1	-9	multi-exon	FALSE	canonical	2	12	junction_1	19.4952898550038	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGAAAATGTAGCCTTTA	2757	False	NA	NA	False	NA	NA	NA	126971188	127018154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_126971394_126972200_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
tx.14195	chr4	+	5012	14	NIC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-3	-8	intron_retention	TRUE	canonical	3	69	junction_3	8.41103811251486	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAAATGTAGCCTTTAT	2741	False	NA	NA	False	NA	NA	NA	126971172	127018155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
tx.14196	chr4	+	1125	3	FSM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	-4	-1	-4	1	multi-exon	FALSE	canonical	3	98	junction_2	3.5	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTACTTCGTCCACTT	NA	False	NA	NA	False	NA	NA	NA	127019834	127023438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_127019987_127021611_127021793_127022646
tx.14197	chr4	+	3927	12	FSM	ENSMUSG00000042388.15	ENSMUST00000046659.14	3884	12	-46	3	-46	-3	multi-exon	TRUE	canonical	3	99	junction_1	32.2174943493246	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCAAATCTCTCCAGAA	NA	False	NA	NA	False	NA	NA	NA	127062950	127130812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_127063159_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
tx.14198	chr4	+	3498	10	ISM	ENSMUSG00000042388.15	ENSMUST00000106094.9	4207	12	21818	5	85	-5	3prime_fragment	FALSE	canonical	3	109	junction_1	23.6992472662668	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAGCCAAATCTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	127088490	127130810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
tx.14199	chr4	+	3212	9	ISM	ENSMUSG00000042388.15	ENSMUST00000106094.9	4207	12	26066	2	4333	-2	3prime_fragment	FALSE	canonical	3	155	junction_4	13.1600721882519	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAAATCTCTCCAGAAG	NA	False	NA	NA	False	NA	NA	NA	127092738	127130813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
tx.1420	chr10	-	2319	3	FSM	ENSMUSG00000019838.12	ENSMUST00000213488.2	2325	3	3	3	2	-3	multi-exon	FALSE	canonical	3	21	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGTTTGCTTCAGTTTTT	7145	False	NA	NA	False	NA	NA	NA	40018248	39951389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_39953014_39956658_39956804_40017698
tx.14200	chr4	+	2401	8	ISM	ENSMUSG00000042388.15	ENSMUST00000106094.9	4207	12	27262	2	-3164	-2	3prime_fragment	FALSE	canonical	3	155	junction_3	14.059639731791	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAAATCTCTCCAGAAG	NA	False	NA	NA	False	NA	NA	NA	127093934	127130813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
tx.14201	chr4	+	994	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	28	0	28	0	multi-exon	FALSE	canonical	3	445	junction_1	0	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGAGTCCTGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	127137604	127141602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_127137692_127140695
tx.14202	chr4	-	1703	2	FSM	ENSMUSG00000050234.8	ENSMUST00000053753.8	1685	2	-18	0	-18	0	multi-exon	FALSE	canonical	3	11	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGTGTGCACTGATGTT	NA	False	NA	NA	False	NA	NA	NA	127207850	127205213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_127206779_127207712
tx.14203	chr4	-	1603	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	20	0	20	0	multi-exon	FALSE	canonical	3	984	junction_1	0	808	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	NA	False	NA	NA	NA	127222934	127219027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_127220565_127222868
tx.14204	chr4	-	1845	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	35	0	35	0	multi-exon	FALSE	canonical	3	980	junction_1	0	960	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	NA	False	NA	NA	NA	127224602	127219027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_127220565_127224294
tx.14205	chr4	+	1293	4	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	21.4165045389453	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTATACATTTAGTGT	8423	False	NA	NA	False	NA	NA	NA	127223184	127237045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_127224096_127225680_127225785_127226134_127226258_127236890
tx.14206	chr4	-	2747	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	2	-1304	2	1304	multi-exon	FALSE	canonical	3	55	junction_1	0	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGTGAGCCTCGTGGA	4506	False	NA	NA	False	NA	NA	NA	127247872	127243574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_127246275_127247825
tx.14207	chr4	-	1330	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	3	388	3	-388	multi-exon	FALSE	canonical	3	573	junction_1	0	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTTTGGGTCT	407	False	NA	NA	False	NA	NA	NA	127251971	127248989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_127250167_127251818
tx.14208	chr4	-	5303	8	FSM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	64	-3	0	3	multi-exon	FALSE	canonical	3	8	junction_1	4.69041575982343	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACATTTTGTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	128503827	128477336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
tx.14209	chr4	-	5281	8	NIC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	5	2	intron_retention	FALSE	canonical	2	2	junction_7	7.34846922834953	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAACATTTTGTATTTCT	NA	False	NA	NA	False	NA	NA	NA	128503822	128477337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503802
tx.1421	chr10	-	1179	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	-3	-73	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	393.075374451262	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAACTTGTGTTTGGATC	6563	False	NA	NA	False	NA	NA	NA	40123026	40099495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120580_40120714_40122948
tx.14210	chr4	-	3526	8	NNC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	7	0	intron_retention	FALSE	canonical	2	4	junction_2	6.72794962246664	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTCTTTACAAATGCTG	NA	False	NA	NA	False	NA	NA	NA	128503884	128479167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_128480638_128481808_128482235_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
tx.14211	chr4	+	2387	7	NNC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.6937933157397	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGTGGCTTTCTCCC	NA	False	NA	NA	False	NA	NA	NA	128621373	128646668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_128621664_128637146_128637255_128638845_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
tx.14212	chr4	+	2442	7	NIC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	50.0513625078168	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	128621368	128646667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_128621664_128637146_128637255_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
tx.14213	chr4	+	2539	7	FSM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	-10	6	-6	-6	multi-exon	FALSE	canonical	3	155	junction_1	20.8865985742054	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGTGGCTTTCTCCC	NA	False	NA	NA	False	NA	NA	NA	128621367	128646668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
tx.14214	chr4	-	3206	9	FSM	ENSMUSG00000028799.16	ENSMUST00000106072.9	2812	9	-396	2	-396	-2	multi-exon	FALSE	canonical	3	13	junction_4	3.19912097301743	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCGGCTTTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	128700234	128666882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128688643_128688770_128699804
tx.14215	chr4	+	3793	5	FSM	ENSMUSG00000041000.9	ENSMUST00000035667.9	3752	5	-42	1	-34	-1	multi-exon	TRUE	canonical	1	1	junction_4	1.78535710713571	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGTACGTTCCATTCA	NA	False	NA	NA	False	NA	NA	NA	128777338	128805120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_128778371_128790612_128790709_128794338_128794596_128796265_128796382_128802828
tx.14216	chr4	-	1895	10	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	8.90831211236775	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTCAGTGGAATCAT	NA	False	NA	NA	False	NA	NA	NA	128856231	128825807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855155_128855353_128855876_128855998_128856093
tx.14217	chr4	-	2071	11	FSM	ENSMUSG00000028789.17	ENSMUST00000030581.10	2063	11	-1	-7	-1	7	multi-exon	FALSE	canonical	0	0	junction_10	8.67698104181403	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTCAGTGGAATCAT	NA	False	NA	NA	False	NA	NA	NA	128856233	128825807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
tx.14218	chr4	+	1740	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	41	0	41	0	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	1108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2910	False	NA	NA	False	NA	NA	NA	128887057	128905322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
tx.14219	chr4	+	2714	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	-182	0	-182	0	multi-exon	FALSE	canonical	3	132	junction_2	17.2005632175228	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	False	NA	NA	False	NA	NA	NA	128951881	128978319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
tx.1422	chr10	-	1224	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	5	67	-4	-67	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	526	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTTGGATCATACTC	6562	False	NA	NA	False	NA	NA	NA	40123027	40099489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
tx.14220	chr4	+	2712	9	FSM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	-721	1	-178	-1	multi-exon	FALSE	canonical	3	28	junction_2	45.8214946831724	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATGTCACTGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	128951885	128978318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
tx.14221	chr4	+	194	2	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	36	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACCCACCAATTTCAAA	5258	False	NA	NA	False	NA	NA	NA	129040919	129041346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_129041063_129041295
tx.14222	chr4	-	4420	7	FSM	ENSMUSG00000040928.16	ENSMUST00000106061.9	4426	7	9	-3	9	3	multi-exon	FALSE	canonical	3	32	junction_6	60.2301142840246	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1197	False	NA	NA	False	NA	NA	NA	129083326	129041794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083164
tx.14223	chr4	-	4111	9	FSM	ENSMUSG00000040928.16	ENSMUST00000072431.13	4059	9	-49	-3	-2	3	multi-exon	FALSE	canonical	3	18	junction_6	67.6456761367643	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1102	False	NA	NA	False	NA	NA	NA	129083421	129041794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129077393_129077511_129083334
tx.14224	chr4	-	4355	7	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-13	2	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1091	False	NA	NA	False	NA	NA	NA	129083432	129041795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
tx.14225	chr4	-	4228	6	NIC	ENSMUSG00000040928.16	novel	1053	7	NA	NA	-3	2	intron_retention	FALSE	canonical	3	52	junction_5	57.9931030382062	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1101	False	NA	NA	False	NA	NA	NA	129083422	129041795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129083334
tx.14226	chr4	-	4272	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	32	junction_7	68.3591953714841	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATATGTACTGTGGCC	1213	False	NA	NA	False	NA	NA	NA	129083310	129041800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083164
tx.14227	chr4	+	2394	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	144	371	2	-371	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	2258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	857	False	NA	NA	False	NA	NA	NA	129083696	129113029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
tx.14228	chr4	+	2405	10	ISM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	10473	361	2999	-361	3prime_fragment	FALSE	canonical	3	1466	junction_6	55.8425918249538	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCGTGAGCTGCATCA	9969	False	NA	NA	False	NA	NA	NA	129094025	129113039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
tx.14229	chr4	-	5233	7	FSM	ENSMUSG00000050390.13	ENSMUST00000052602.6	5187	7	-46	0	-46	0	multi-exon	FALSE	canonical	3	145	junction_6	42.0713679359253	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	129142282	129113370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
tx.1423	chr10	-	2536	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-11	1	-6	-1	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	230	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAATAGTTGATGGTTGC	8575	False	NA	NA	False	NA	NA	NA	40133678	40123699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
tx.14230	chr4	-	3803	2	ISM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	4192	2	3761	-2	3prime_fragment	FALSE	canonical	3	262	junction_1	0	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGACTGCTGTTTTC	4567	False	NA	NA	False	NA	NA	NA	129117512	129113372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_129115271_129115607
tx.14231	chr4	-	5082	7	FSM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	-49	0	-49	0	multi-exon	FALSE	canonical	3	123	junction_6	50.045534821356	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	129133016	129113370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
tx.14232	chr4	-	860	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	21	6	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGGTGGGTTTTATTT	2513	False	NA	NA	False	NA	NA	NA	129229142	129203303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
tx.14233	chr4	-	1694	12	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	22	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	305.162062349697	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGTGGGTTTTATTTA	2514	False	NA	NA	False	NA	NA	NA	129229141	129203302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_129203670_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
tx.14234	chr4	-	1964	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	30	2413	30	4	multi-exon	TRUE	canonical	3	482	junction_1	226.647613038099	343	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGCTGGTGGGTTTTAT	2522	False	NA	NA	False	NA	NA	NA	129229133	129203305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
tx.14235	chr4	-	1829	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	298.072173866219	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGCTGGTGGGTTTT	2508	False	NA	NA	False	NA	NA	NA	129229147	129203307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_129203670_129203816_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
tx.14236	chr4	+	769	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	274	2790	-43	48	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGTCTTGTACTTGGTC	NA	False	NA	NA	False	NA	NA	NA	129229761	129240874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
tx.14237	chr4	-	1940	4	ISM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	8793	5	8793	-5	3prime_fragment	FALSE	canonical	3	139	junction_3	5.43650214343336	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATCTTTTTCGTGACAC	5683	False	NA	NA	False	NA	NA	NA	129263116	129247425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021
tx.14238	chr4	-	2201	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	116	4	116	-4	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTTTTTCGTGACACT	NA	False	NA	NA	False	NA	NA	NA	129271793	129247424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
tx.14239	chr4	+	2725	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	95	3	4	-3	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCGGAAGTGTCCGGGGA	NA	False	NA	NA	False	NA	NA	NA	129355468	129382288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
tx.1424	chr10	-	3198	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	0	6	0	-6	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	442	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGAAAGTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	40178182	40163459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
tx.14240	chr4	+	1545	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	50	10	50	-10	multi-exon	FALSE	canonical	3	8029	junction_1	0	6638	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTCATTGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	129407423	129409768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_129407710_129408509
tx.14241	chr4	-	2013	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	23	2	1	-2	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	1893	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCCTGGTTGGTTTAAG	8831	False	NA	NA	False	NA	NA	NA	129436483	129409898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
tx.14242	chr4	-	1604	7	ISM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	1828	6	-85	-1	3prime_fragment	FALSE	canonical	3	108	junction_2	13.2214052035158	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTCTACTGCATACT	NA	False	NA	NA	False	NA	NA	NA	129450337	129442142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080
tx.14243	chr4	-	2200	12	FSM	ENSMUSG00000000409.15	ENSMUST00000067240.11	2185	12	-16	1	-16	-1	multi-exon	FALSE	canonical	3	10	junction_9	59.1335510476424	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTCTACTGCATACT	NA	False	NA	NA	False	NA	NA	NA	129452200	129442142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873
tx.14244	chr4	-	1093	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	16	14	16	-14	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	572	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	6393	False	NA	NA	False	NA	NA	NA	129494425	129485766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
tx.14245	chr4	+	1540	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	-14	-7	-1	0	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3182	False	NA	NA	False	NA	NA	NA	129494478	129502321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
tx.14246	chr4	+	1427	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	10	0	-1	0	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3186	False	NA	NA	False	NA	NA	NA	129494482	129502321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
tx.14247	chr4	+	1667	4	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	325	junction_1	193.096406549221	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3197	False	NA	NA	False	NA	NA	NA	129494493	129502321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_129494928_129495987_129496055_129500879_129500973_129501248
tx.14248	chr4	-	1766	6	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-5	-5	combination_of_known_junctions	TRUE	canonical	3	40	junction_1	35.7960891718635	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATATATGTACAAATAT	NA	False	NA	NA	False	NA	NA	NA	129512897	129508923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_129509881_129510753_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
tx.14249	chr4	-	2141	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	5	493	2	140	multi-exon	FALSE	canonical	3	109	junction_1	14.396180048888	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCACGCCTTTAATCCC	NA	False	NA	NA	False	NA	NA	NA	129512887	129509411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
tx.1425	chr10	+	5790	13	FSM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	17	0	-12	0	multi-exon	FALSE	canonical	3	22	junction_12	6.08447477875727	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	40225320	40359814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
tx.14250	chr4	-	498	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	-8	1	-5	-1	multi-exon	FALSE	canonical	3	28	junction_1	58	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGACTTGTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	129512897	129511892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129512156_129512284_129512429_129512806
tx.14251	chr4	-	4800	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	50	-3	50	-2	multi-exon	FALSE	canonical	3	289	junction_1	24.9225962224873	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTCAGCCAATCGAATT	8170	False	NA	NA	False	NA	NA	NA	129534548	129519872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
tx.14252	chr4	-	4531	11	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	101.622094054394	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCAGCCAATCGAATTA	7937	False	NA	NA	False	NA	NA	NA	129534781	129519871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534723
tx.14253	chr4	-	4781	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	19	0	intron_retention	FALSE	canonical	3	279	junction_9	29.6048044148994	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	7879	False	NA	NA	False	NA	NA	NA	129534839	129519875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
tx.14254	chr4	-	4294	9	ISM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	1241	0	1076	0	3prime_fragment	FALSE	canonical	3	289	junction_1	26.3818119165458	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	9361	False	NA	NA	False	NA	NA	NA	129533357	129519875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021
tx.14255	chr4	-	4544	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	20	5	20	0	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	466	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	7880	False	NA	NA	False	NA	NA	NA	129534838	129519875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
tx.14256	chr4	-	5615	13	ISM	ENSMUSG00000003731.14	ENSMUST00000003828.11	2195	14	1039	-3499	1039	-5	3prime_fragment	TRUE	canonical	3	106	junction_4	15.4997759840443	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGTT	3602	False	NA	-70	True	NA	NA	NA	129555233	129537777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098
tx.14257	chr4	-	5698	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	7	5	7	-5	multi-exon	FALSE	canonical	3	106	junction_4	15.2943505832485	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGTT	8841	False	NA	NA	False	NA	NA	NA	129566553	129537777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
tx.14258	chr4	-	1806	9	FSM	ENSMUSG00000053730.16	ENSMUST00000102588.10	1810	9	4	0	4	0	multi-exon	FALSE	canonical	2	15	junction_6	5.99869777535091	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTGTGTCCTGTGATT	9996	False	NA	NA	False	NA	NA	NA	129590627	129570147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586858_129587079_129587678_129587806_129590507
tx.14259	chr4	-	2699	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	2	1037	2	-1037	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	1162	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	4983	False	NA	NA	False	NA	NA	NA	129636087	129608648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
tx.1426	chr10	+	4193	2	ISM	ENSMUSG00000038481.14	ENSMUST00000215000.2	5681	12	128562	0	128394	0	3prime_fragment	FALSE	canonical	3	22	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	4419	False	NA	NA	False	NA	NA	NA	40353915	40359814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_40353965_40355670
tx.14260	chr4	+	3657	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-12	1	-12	-1	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	770	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTGAATTTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	129714001	129743770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
tx.14261	chr4	+	3535	5	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	1221.62934231296	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTGAATTTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	129713992	129743770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_129714395_129732770_129733472_129736462_129736556_129740257_129740333_129741506
tx.14262	chr4	+	3335	6	FSM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	20	27	7	-2	multi-exon	FALSE	canonical	3	11	junction_1	1089.03101884198	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGTGAATTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	129714520	129743769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_129714593_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
tx.14263	chr4	+	3212	5	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	18322	26	-121	-1	3prime_fragment	FALSE	canonical	3	2484	junction_4	143.886239786854	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTGAATTTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	129732822	129743770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
tx.14264	chr4	+	5355	29	NIC	ENSMUSG00000028782.15	novel	5104	30	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	7.28527659749723	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	NA	False	NA	NA	False	NA	NA	NA	129878642	129916426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
tx.14265	chr4	+	5203	28	FSM	ENSMUSG00000028782.15	ENSMUST00000120204.8	5170	28	-33	0	-33	0	multi-exon	TRUE	canonical	2	10	junction_2	6.85835527200487	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	NA	False	NA	NA	False	NA	NA	NA	129878629	129916426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
tx.14266	chr4	+	3833	25	NIC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-3135	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_14	5.46055934253382	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	1488	False	NA	NA	False	NA	NA	NA	129900533	129916426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
tx.14267	chr4	+	1504	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	48	-1	48	0	multi-exon	FALSE	canonical	3	185	junction_1	25.1047804212664	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCTTGACTGTGTGTC	9326	False	NA	NA	False	NA	NA	NA	130001396	130021928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
tx.14268	chr4	-	2360	11	ISM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	105	2	-6	0	3prime_fragment	FALSE	canonical	3	205	junction_9	24.2991769407937	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTCTGGGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	130068490	130059396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685
tx.14269	chr4	-	1950	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	0	2	0	0	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTCTGGGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	130068595	130059396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
tx.1427	chr10	-	3336	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	198	0	-4	0	multi-exon	FALSE	canonical	3	163	junction_10	18.6027208894236	226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGAGTTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	40759109	40707616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
tx.14270	chr4	-	2038	12	NNC	ENSMUSG00000023232.18	novel	1452	11	NA	NA	-16292	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	4.95600478925055	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTCCCATGTCTTG	NA	False	NA	NA	False	NA	NA	NA	130189290	130147289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130172224_130172276_130174143_130174242_130189148
tx.14271	chr4	+	678	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	144	1	144	-1	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	885	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTTGGTCCT	NA	False	NA	NA	False	NA	NA	NA	130202531	130209255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
tx.14272	chr4	-	2061	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-12	-6	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGAACTGGGTCCAGGC	NA	False	NA	NA	False	NA	NA	NA	130253748	130209181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
tx.14273	chr4	-	1605	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	-12	520	-12	376	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCGCTTTCCCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	130253748	130209695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
tx.14274	chr4	+	1559	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	32	-7	-30	7	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	853	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGACTTGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	130253956	130283826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
tx.14275	chr4	+	2709	7	FSM	ENSMUSG00000078532.10	ENSMUST00000105993.4	1202	7	-25	-1482	-25	1466	multi-exon	FALSE	canonical	3	69	junction_2	13.2748718344933	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTATCTGTCTTGCCCT	NA	False	NA	NA	False	NA	NA	NA	130297171	130341110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331
tx.14276	chr4	+	2736	7	FSM	ENSMUSG00000078532.10	ENSMUST00000180884.8	1028	7	-238	-1470	-31	1470	multi-exon	TRUE	canonical	3	9	junction_3	30.3790863735052	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCTGTCTTGCCCTCTTG	NA	False	NA	NA	False	NA	NA	NA	130297165	130341114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337183_130337399_130338581_130338643_130339094_130339177_130339331
tx.14277	chr4	+	4978	5	FSM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	-7	2	-7	-2	multi-exon	FALSE	canonical	3	49	junction_4	11.1018016555873	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGTGGTGGCCCACGTG	NA	False	NA	NA	False	NA	NA	NA	130519840	130553628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678_130548968_130549953
tx.14278	chr4	+	2554	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	7	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	243	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	130640442	130663450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662433_130662469
tx.14279	chr4	+	2529	8	FSM	ENSMUSG00000028581.18	ENSMUST00000151698.8	2600	8	69	2	69	-2	multi-exon	FALSE	canonical	3	425	junction_4	26.2071808199702	284	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	130640504	130663450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
tx.1428	chr10	+	2580	9	FSM	ENSMUSG00000019831.15	ENSMUST00000019975.14	2609	9	28	1	28	-1	multi-exon	FALSE	canonical	3	17	junction_1	81.4024531264261	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGTGTCGCTCTTCGA	NA	False	NA	NA	False	NA	NA	NA	40759498	40814564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_40759606_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
tx.14280	chr4	-	5501	30	NNC	ENSMUSG00000028909.18	novel	5484	30	NA	NA	-26	0	intron_retention	TRUE	canonical	0	0	junction_10	2.28524710700426	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGGCTCTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	131565625	131495767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018_131548291_131551142_131551275_131565394
tx.14281	chr4	+	1335	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	2	0	2	0	multi-exon	FALSE	canonical	3	105	junction_6	17.6243378301319	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGCGTGTGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	131570782	131595097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
tx.14282	chr4	+	2890	9	NIC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_3	167.217625790465	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	NA	False	NA	NA	NA	131600859	131629017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
tx.14283	chr4	+	2258	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	428	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	NA	False	NA	NA	NA	131600926	131629017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
tx.14284	chr4	+	2681	5	ISM	ENSMUSG00000028911.17	ENSMUST00000030743.10	3100	6	5321	0	5321	0	3prime_fragment	FALSE	canonical	3	361	junction_4	32.3061526647789	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	NA	False	NA	NA	NA	131617839	131629017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
tx.14285	chr4	+	2912	2	FSM	ENSMUSG00000070720.5	ENSMUST00000238733.2	961	2	-621	-1330	-621	815	multi-exon	FALSE	canonical	2	5	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTGTGCCTGAGTCA	NA	False	NA	NA	False	NA	NA	NA	131647889	131651266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_131648597_131649061
tx.14286	chr4	-	5256	19	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	34.6963903911176	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	NA	NA	NA	131776425	131650723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
tx.14287	chr4	-	5207	18	FSM	ENSMUSG00000028906.18	ENSMUST00000084253.10	5141	18	-50	-16	-37	0	multi-exon	FALSE	canonical	3	49	junction_17	28.8854077694417	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	NA	NA	NA	131776439	131650723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
tx.14288	chr4	-	5678	19	NIC	ENSMUSG00000028906.18	novel	5141	18	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	34.7035060668707	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	NA	NA	NA	131776460	131650723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
tx.14289	chr4	-	5532	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	31.5264439267525	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5301	False	NA	NA	False	NA	NA	NA	131802640	131650723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
tx.1429	chr10	+	2717	9	FSM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	0	2	0	-1	multi-exon	FALSE	canonical	3	202	junction_5	32.5209067370515	277	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGTGTCGCTCTTCGA	NA	False	NA	NA	False	NA	NA	NA	40759822	40814564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
tx.14290	chr4	-	5077	18	FSM	ENSMUSG00000028906.18	ENSMUST00000146021.8	5074	18	-3	0	-3	0	multi-exon	FALSE	canonical	3	68	junction_5	24.1593613426437	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5306	False	NA	NA	False	NA	NA	NA	131802635	131650723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
tx.14291	chr4	-	3916	7	ISM	ENSMUSG00000028906.18	ENSMUST00000238852.2	2375	15	-49	29583	-49	2348	5prime_fragment	FALSE	canonical	3	49	junction_6	30.3351647798759	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTGTAGTCTTTAATA	NA	False	NA	NA	False	NA	NA	NA	131776451	131714513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
tx.14292	chr4	-	2793	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	185	1151	-13	227	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	1318	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTACCACTTAGTATTA	NA	False	NA	NA	False	NA	NA	NA	131939429	131913373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
tx.14293	chr4	-	4611	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	19	-2705	19	-20	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTCTATGTATAAGTA	1931	False	NA	NA	False	NA	NA	NA	131988894	131950276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
tx.14294	chr4	-	1857	9	FSM	ENSMUSG00000028901.14	ENSMUST00000030733.9	2485	9	19	609	19	43	multi-exon	FALSE	canonical	3	57	junction_3	6.23372881989584	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGTTGTAACTGCAAATG	3584	False	NA	NA	False	NA	NA	NA	131979144	131952938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985
tx.14295	chr4	-	4691	11	FSM	ENSMUSG00000028901.14	ENSMUST00000105965.8	4632	11	-71	12	10	-12	multi-exon	FALSE	canonical	2	6	junction_10	24.0074988284911	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATAAGTACTAAACGC	1922	False	NA	NA	False	NA	NA	NA	131988903	131950268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131979741_131979805_131988801
tx.14296	chr4	+	1330	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	20	2437	-18	617	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTGTCCATAGGACCT	NA	False	NA	NA	False	NA	NA	NA	132001705	132020640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
tx.14297	chr4	+	1515	7	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	-5	615	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	223.982886251011	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTAGTGTCCATAGGAC	NA	False	NA	NA	False	NA	NA	NA	132001680	132020638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_132001799_132003933_132004096_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
tx.14298	chr4	+	608	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	-2	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	27.427176303805	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	132035986	132038335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
tx.14299	chr4	-	1120	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	10	0	10	0	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2326	False	NA	NA	False	NA	NA	NA	132056839	132039073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
tx.1430	chr10	-	3262	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	20	0	20	0	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	767	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	False	NA	NA	False	NA	NA	NA	41179236	41064167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
tx.14300	chr4	-	1030	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	168.067042016705	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2316	False	NA	NA	False	NA	NA	NA	132056849	132039075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132056663
tx.14301	chr4	-	2238	10	FSM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	45	2	-1	2	multi-exon	FALSE	canonical	3	372	junction_9	35.0019399815087	406	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGTTTTTATGCGTGT	5484	False	NA	NA	False	NA	NA	NA	132073013	132059231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
tx.14302	chr4	-	2510	13	NIC	ENSMUSG00000028896.14	novel	2326	11	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_10	276.521347377658	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	NA	False	NA	NA	False	NA	NA	NA	132080959	132059233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132079432_132079555_132079973_132080010_132080907
tx.14303	chr4	-	4562	14	FSM	ENSMUSG00000066043.14	ENSMUST00000102568.10	4614	14	52	0	4	0	multi-exon	FALSE	canonical	2	21	junction_11	24.1391430016078	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTGTGTTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	132149748	132083233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132110592_132110674_132114202_132114377_132140380_132140435_132149655
tx.14304	chr4	-	4483	13	FSM	ENSMUSG00000066043.14	ENSMUST00000084170.12	4483	13	7	-7	2	0	multi-exon	FALSE	canonical	3	61	junction_10	11.8591268181468	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTGTGTTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	132149750	132083233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132149655
tx.14305	chr4	-	1673	3	FSM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	5	-3	5	3	multi-exon	FALSE	canonical	3	250	junction_2	8.5	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATTCTGATTCTTAC	1052	False	NA	NA	False	NA	NA	NA	132191227	132186038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132187425_132190175_132190320_132191084
tx.14306	chr4	-	3474	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	1	0	1	0	multi-exon	TRUE	canonical	3	666	junction_4	59.9637750728526	1671	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	NA	False	NA	NA	NA	132237811	132219342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
tx.14307	chr4	-	476	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	59	4	-5	-4	multi-exon	FALSE	canonical	3	7869	junction_2	284	1132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTGATGCCTTCTACT	9300	False	NA	NA	False	NA	NA	NA	132260911	132257869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132258135_132260606_132260699_132260792
tx.14308	chr4	+	1384	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	12	5	-5	-5	multi-exon	TRUE	canonical	3	2684	junction_8	233.065676097962	2018	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGATGGTCTCCTCCT	2343	False	NA	NA	False	NA	NA	NA	132262872	132281048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
tx.14309	chr4	+	2520	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	10	2630	0	0	multi-exon	FALSE	canonical	3	62	junction_15	5.48542101848163	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	NA	False	NA	NA	NA	132366366	132449446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
tx.1431	chr10	+	2922	8	NNC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	38.0542040907387	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACTTGATCTTTATCAA	NA	False	NA	NA	False	NA	NA	NA	41326384	41341573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41339957_41340039_41340272
tx.14310	chr4	-	3973	3	FSM	ENSMUSG00000037752.5	ENSMUST00000150104.2	376	3	8	-3605	8	-4	multi-exon	FALSE	canonical	3	5	junction_2	21.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAATTGTTTATTTTCC	4070	False	NA	NA	False	NA	NA	NA	132459831	132452211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132455882_132458186_132458384_132459725
tx.14311	chr4	-	1819	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	26	2400	8	1209	multi-exon	FALSE	canonical	3	48	junction_1	6.5	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTACCACTAAGTGTAG	4070	False	NA	NA	False	NA	NA	NA	132459831	132454607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132455882_132458186_132458384_132459483
tx.14312	chr4	-	1934	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	70	2	70	-2	multi-exon	FALSE	canonical	3	69	junction_5	8.56666534317997	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACCGTGAGGGATCACA	NA	False	NA	NA	False	NA	NA	NA	132484493	132460278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
tx.14313	chr4	+	1540	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	4	269	4	-269	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	705	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTGAAATGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	132495649	132505794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
tx.14314	chr4	-	2009	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	28	0	-7	0	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	212	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	False	NA	NA	False	NA	NA	NA	132570452	132554239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
tx.14315	chr4	-	4633	8	NIC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	39	-3	intron_retention	FALSE	canonical	3	172	junction_4	25.3473824273507	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTGTTGCACTTGAT	6132	False	NA	NA	False	NA	NA	NA	132611781	132580814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
tx.14316	chr4	-	2337	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	44	553	44	-553	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	270	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATGAGTTAACATCCT	6137	False	NA	NA	False	NA	NA	NA	132611776	132581364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
tx.14317	chr4	-	2946	8	FSM	ENSMUSG00000028878.12	ENSMUST00000097856.10	1863	8	-46	-1037	19	-1	multi-exon	FALSE	canonical	3	35	junction_3	31.9367998345712	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTTGTGATTCAGTT	NA	False	NA	NA	False	NA	NA	NA	132649850	132626524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
tx.14318	chr4	-	3044	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	8	1	8	-1	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTTGTGATTCAGTT	NA	False	NA	NA	False	NA	NA	NA	132649861	132626524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
tx.14319	chr4	+	6051	7	NIC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	-19	17	intron_retention	FALSE	canonical	3	7	junction_1	37.3972666856223	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTCTTGTAAAACTG	1170	False	NA	NA	False	NA	NA	NA	132738797	132804973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_132738835_132739503_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
tx.1432	chr10	+	2849	7	FSM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	1	-6	1	6	multi-exon	FALSE	canonical	3	58	junction_6	14.3807355707403	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGATCTTTATCAAAAA	NA	False	NA	NA	False	NA	NA	NA	41326379	41341576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
tx.14320	chr4	+	6371	6	FSM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	-63	-410	-63	7	multi-exon	FALSE	canonical	3	23	junction_2	36.5217743271052	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	132766740	132804963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132767098_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
tx.14321	chr4	+	6295	6	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-90	9	intron_retention	FALSE	canonical	3	39	junction_1	32.2204903749152	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAACCTTGTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	132766713	132804965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_132767098_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
tx.14322	chr4	+	4172	2	ISM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	23285	-416	-3471	13	3prime_fragment	FALSE	canonical	3	130	junction_1	0	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTTGTGTCTTGTAAA	NA	False	NA	NA	False	NA	NA	NA	132790088	132804969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_132793589_132804297
tx.14323	chr4	+	5600	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	38	4	3	-4	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	474	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACCTTTGGTGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	132857853	132927063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
tx.14324	chr4	+	929	6	FSM	ENSMUSG00000028865.15	ENSMUST00000105910.2	986	6	54	3	54	-3	multi-exon	FALSE	canonical	3	29	junction_1	9.2736184954957	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTGACCTATGTCTT	NA	False	NA	NA	False	NA	NA	NA	132948174	132951863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132948379_132948753_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
tx.14325	chr4	+	4368	29	FSM	ENSMUSG00000028862.7	ENSMUST00000030677.7	4334	29	-34	0	-34	0	multi-exon	TRUE	canonical	2	4	junction_2	5.06727697273075	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTTGGCAACTTCA	8415	False	NA	NA	False	NA	NA	NA	132968094	132980240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132968743_132970128_132970269_132970363_132970388_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
tx.14326	chr4	-	1935	15	FSM	ENSMUSG00000028860.14	ENSMUST00000030674.8	1951	15	10	6	10	2	multi-exon	TRUE	canonical	1	4	junction_9	2.42541812090709	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGACTGCTTAACTGG	NA	False	NA	NA	False	NA	NA	NA	132990414	132980406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132980620_132980765_132980972_132982843_132982944_132983044_132983124_132983352_132983512_132983798_132983896_132984175_132984343_132984446_132984561_132984727_132984823_132985044_132985133_132986171_132986218_132986292_132986369_132986598_132986748_132988163_132988393_132990297
tx.14327	chr4	-	1608	7	FSM	ENSMUSG00000028857.17	ENSMUST00000134781.8	613	7	-153	-842	-1	0	multi-exon	FALSE	canonical	3	22	junction_5	347.535609686259	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	133005082	132993355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132997980_132998126_132998273_132998359_133004841
tx.14328	chr4	-	1469	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	15	0	-7	0	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	526	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	133005088	132993355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
tx.14329	chr4	-	1385	5	FSM	ENSMUSG00000028857.17	ENSMUST00000139030.2	546	5	-8	-831	-8	0	multi-exon	FALSE	canonical	3	79	junction_4	309.884151740614	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	133005089	132993355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_133004841
tx.1433	chr10	+	2518	2	FSM	ENSMUSG00000019826.12	ENSMUST00000216656.2	2476	2	-45	3	7	-3	multi-exon	FALSE	canonical	3	104	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATCTTTAGACTCTTC	NA	False	NA	NA	False	NA	NA	NA	41326385	41329461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_41326527_41327084
tx.14330	chr4	-	3917	16	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-234	-7	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_15	123.385394417474	32	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	4030	False	NA	NA	False	NA	NA	NA	133066869	133019776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133066807
tx.14331	chr4	-	3975	16	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-27	-7	combination_of_known_junctions	FALSE	canonical	3	428	junction_6	32.7350305059003	687	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8963	False	NA	NA	False	NA	NA	NA	133080216	133019776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
tx.14332	chr4	+	4648	12	FSM	ENSMUSG00000028854.10	ENSMUST00000030669.8	4676	12	24	4	24	-4	multi-exon	FALSE	canonical	3	38	junction_3	11.7922793063796	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTCCAGGGCTGCTTCC	181	False	NA	NA	False	NA	NA	NA	133097040	133151009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
tx.14333	chr4	+	2286	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	1	0	1	0	multi-exon	TRUE	canonical	3	34	junction_1	0	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAACTGTATCTTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	133207443	133215249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_133207875_133213394
tx.14334	chr4	-	1653	2	FSM	ENSMUSG00000056596.9	ENSMUST00000125541.2	1654	2	1	0	1	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACGTGTGGTTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	133225860	133218410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133219142_133224938
tx.14335	chr4	+	1936	4	NIC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	23.3666428910958	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGCCTGGTCATCAG	5472	False	NA	NA	False	NA	NA	NA	133246274	133258099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_133246364_133255050_133256321_133257141_133257217_133257597
tx.14336	chr4	+	1904	4	NIC	ENSMUSG00000037600.17	novel	1699	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	21.9544984001001	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGCCTGGTCATCAG	5563	False	NA	NA	False	NA	NA	NA	133246365	133258099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_133246423_133255050_133256321_133257141_133257217_133257597
tx.14337	chr4	-	1306	8	FSM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	8	2	8	-2	multi-exon	FALSE	canonical	3	2323	junction_4	508.87928082108	2587	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4468	False	NA	NA	False	NA	NA	NA	133273299	133259854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
tx.14338	chr4	+	1993	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	7	4	7	-4	multi-exon	FALSE	canonical	3	33	junction_3	9.82626864865578	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATCTGCCTTAGTGAA	NA	False	NA	NA	False	NA	NA	NA	133302062	133311550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
tx.14339	chr4	+	3483	11	Fusion	ENSMUSG00000028848.14_ENSMUSG00000028850.3	novel	2004	7	NA	NA	5	-1	multi-exon	FALSE	canonical	3	33	junction_3	55.2959311342164	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTTTTTTTAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	133302060	133319045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
tx.1434	chr10	+	3540	24	FSM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	23	0	1	0	multi-exon	FALSE	canonical	3	135	junction_2	27.5095446574272	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9116	False	NA	NA	False	NA	NA	NA	41352332	41363026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
tx.14340	chr4	+	1362	5	FSM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	4	1	4	-1	multi-exon	FALSE	canonical	3	134	junction_3	14.7394029729837	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTTTTTTTAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	133311676	133319045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
tx.14341	chr4	-	2911	8	FSM	ENSMUSG00000037553.15	ENSMUST00000084238.5	4580	8	-25	1694	-25	1676	multi-exon	FALSE	canonical	3	285	junction_4	22.238961949053	728	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTGCTTTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	133360805	133334303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
tx.14342	chr4	-	2933	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	11	1035	11	832	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTCTGAATCTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	133399947	133388732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
tx.14343	chr4	-	1805	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	14	-829	14	829	multi-exon	FALSE	canonical	3	52	junction_1	36	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGGTCTGAATCTTGG	NA	False	NA	NA	False	NA	NA	NA	133399944	133388735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133390103_133397048_133397172_133399629
tx.14344	chr4	-	4437	6	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	66856	0	34021	0	3prime_fragment	FALSE	canonical	3	132	junction_4	17.7606306194347	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	3102	False	NA	NA	False	NA	NA	NA	133414066	133406318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950
tx.14345	chr4	-	5162	10	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	62366	0	29531	0	3prime_fragment	FALSE	canonical	3	118	junction_8	20.5107620049742	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	133418556	133406318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380
tx.14346	chr4	-	5273	11	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	60736	0	27901	0	3prime_fragment	FALSE	canonical	3	115	junction_10	22.1740839720607	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	133420186	133406318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109
tx.14347	chr4	-	6794	18	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	32649	0	-186	0	3prime_fragment	FALSE	canonical	3	84	junction_14	29.4068231142832	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	133448273	133406318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860
tx.14348	chr4	-	8554	20	FSM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	-369	2	2	-2	multi-exon	FALSE	canonical	3	56	junction_19	32.8919156684966	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTGTGAAGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	133481291	133406320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
tx.14349	chr4	-	7126	20	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	40.3589846927467	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	133481306	133406318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133481224
tx.1435	chr10	+	3332	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	71	junction_2	35.4241128130973	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9116	False	NA	NA	False	NA	NA	NA	41352332	41363026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
tx.14350	chr4	-	3948	3	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	67967	2	35132	-2	3prime_fragment	FALSE	canonical	3	162	junction_2	10	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTGTGAAGCTTTTT	4213	False	NA	NA	False	NA	NA	NA	133412955	133406320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_133409367_133411745_133411877_133412184
tx.14351	chr4	-	3129	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	2	4	2	0	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	2237	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7966	False	NA	NA	False	NA	NA	NA	133615106	133574604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
tx.14352	chr4	-	1166	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	95	4	2	-4	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	937	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGCCTCTGATCTTT	NA	False	NA	NA	False	NA	NA	NA	133695217	133692052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
tx.14353	chr4	-	3186	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105887.8	2038	9	-4	-1144	-4	8	multi-exon	FALSE	canonical	3	19	junction_1	18.0346887968714	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGTGTGGTAACTGCAA	NA	False	NA	NA	False	NA	NA	NA	133728186	133696359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133698568_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
tx.14354	chr4	-	3071	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105889.4	890	9	11	-2192	11	6	multi-exon	FALSE	canonical	2	7	junction_8	21.5928228816892	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTGTGTGGTAACTGC	NA	False	NA	NA	False	NA	NA	NA	133728218	133696361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728177
tx.14355	chr4	-	3180	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	15	24	-4	5	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTTGTGTGGTAACTG	NA	False	NA	NA	False	NA	NA	NA	133728186	133696362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
tx.14356	chr4	-	3117	9	FSM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	22	-6	6	6	multi-exon	FALSE	canonical	1	2	junction_8	23.2025725944344	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTGTGTGGTAACTGC	NA	False	NA	NA	False	NA	NA	NA	133728176	133696361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727651_133728035
tx.14357	chr4	-	3514	3	ISM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	440	12	-19	-12	3prime_fragment	FALSE	canonical	3	70	junction_1	3	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGTACTGGTCTCTCT	8690	False	NA	NA	False	NA	NA	NA	133745712	133730652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_133733633_133735221_133735407_133745363
tx.14358	chr4	-	3507	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	-14	12	-14	-12	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGTACTGGTCTCTCT	8236	False	NA	NA	False	NA	NA	NA	133746166	133730652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
tx.14359	chr4	+	1963	15	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	10300	2	-86	1	3prime_fragment	FALSE	canonical	3	24	junction_2	42.4615071781106	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	NA	False	NA	NA	NA	133806062	133819813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
tx.1436	chr10	-	1633	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	-33	2	-4	-2	multi-exon	FALSE	canonical	3	150	junction_9	17.8020667408847	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGCTCTACCTTGTTCC	NA	False	NA	NA	False	NA	NA	NA	41366369	41363169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
tx.14360	chr4	+	1155	8	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13851	2	-9	1	3prime_fragment	FALSE	canonical	3	103	junction_1	10.7532624380336	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	NA	False	NA	NA	NA	133809613	133819813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
tx.14361	chr4	+	1042	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	39.282806530197	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGTGGTCTCGTCTCT	NA	False	NA	NA	False	NA	NA	NA	133809615	133819815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_133809759_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
tx.14362	chr4	+	1561	15	FSM	ENSMUSG00000012126.17	ENSMUST00000074690.11	1573	15	11	1	-9	0	multi-exon	FALSE	canonical	3	35	junction_2	24.8785827078437	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGCTTCACAAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	133829904	133854086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
tx.14363	chr4	-	702	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	36	5	-14	2	multi-exon	FALSE	canonical	3	1437	junction_2	42.5	368	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGACTGCTTGTGGTGTCC	9262	False	NA	NA	False	NA	NA	NA	133856064	133854721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133855118_133855228_133855397_133855926
tx.14364	chr4	-	3854	14	FSM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	39	0	12	0	multi-exon	FALSE	canonical	3	315	junction_5	49.639648211447	731	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	133914384	133857168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
tx.14365	chr4	-	1974	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	2	18	2	0	multi-exon	FALSE	canonical	3	614	junction_2	27	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAGTGTGCATGTAT	7670	False	NA	NA	False	NA	NA	NA	133972901	133970617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133972242_133972335_133972399_133972614
tx.14366	chr4	-	1997	3	NNC	ENSMUSG00000028840.11	novel	1994	3	NA	NA	13	1	intron_retention	FALSE	canonical	3	7	junction_2	330.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCAGTGTGCATGTATT	7681	False	NA	NA	False	NA	NA	NA	133972890	133970616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_133972242_133972335_133972399_133972581
tx.14367	chr4	-	1271	2	FSM	ENSMUSG00000050105.6	ENSMUST00000060050.6	1226	2	-40	-5	-40	5	multi-exon	FALSE	canonical	3	12	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCATGAGTTTGGCTTAA	3374	False	NA	NA	False	NA	NA	NA	133981457	133978415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133979570_133981340
tx.14368	chr4	-	4502	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	8	-1	5	0	multi-exon	FALSE	canonical	3	58	junction_1	10	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAAAGTTCTCTTGCTA	4299	False	NA	NA	False	NA	NA	NA	134014556	134002312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134006428_134011556_134011859_134014471
tx.14369	chr4	-	4713	3	FSM	ENSMUSG00000050890.16	ENSMUST00000061234.14	4686	3	-27	0	-27	0	multi-exon	FALSE	canonical	3	10	junction_2	24	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAAAGTTCTCTTGCTA	3622	False	NA	NA	False	NA	NA	NA	134015233	134002312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134006428_134011556_134011859_134014937
tx.1437	chr10	+	2888	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	28	6	28	-6	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	2761	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGTCATATTTTGA	NA	False	NA	NA	False	NA	NA	NA	41395437	41407038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
tx.14370	chr4	+	2165	9	FSM	ENSMUSG00000028834.14	ENSMUST00000105875.8	1886	9	-276	-3	-276	3	multi-exon	FALSE	canonical	1	4	junction_7	6.8545149354276	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAAAGAAGTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	134042154	134056943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_134042694_134043697_134043871_134046942_134047112_134048493_134048590_134050314_134050549_134052355_134052379_134052894_134053020_134055015_134055094_134056215
tx.14371	chr4	+	3186	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-36	3	-11	-3	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGAGTGTTTTGCCTTGC	2045	False	NA	NA	False	NA	NA	NA	134070480	134081792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
tx.14372	chr4	+	3132	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	183	-1292	183	1	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGAGTGTTTTGCCT	2767	False	NA	NA	False	NA	NA	NA	134071202	134081789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
tx.14373	chr4	-	4145	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	-20	1	-20	-1	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCGGGCTATAAATACGC	7003	False	NA	NA	False	NA	NA	NA	134099889	134083683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
tx.14374	chr4	+	3088	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	78	-918	-9	-3	multi-exon	FALSE	canonical	3	35	junction_4	4.79687398208458	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGCTGGCTGGCTTTCT	1857	False	NA	NA	False	NA	NA	NA	134123708	134154721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
tx.14376	chr4	+	1020	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	35	5	35	-5	multi-exon	FALSE	canonical	3	455	junction_1	251.409029273016	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTCTTTCTGTTCAG	NA	False	NA	NA	False	NA	NA	NA	134195665	134201149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
tx.14377	chr4	+	1246	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	27	2	27	-2	multi-exon	FALSE	canonical	3	435	junction_2	7.5	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTGGTGTCGTGCTT	NA	False	NA	NA	False	NA	NA	NA	134238336	134251236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_134238481_134248782_134248913_134250264
tx.14378	chr4	-	1892	7	NNC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	178.015604809117	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	134262568	134252875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262499
tx.14379	chr4	-	1828	6	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	2514	12	2290	2	3prime_fragment	FALSE	canonical	3	505	junction_1	21.3297913726318	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAATTTTTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	134260065	134252872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937
tx.1438	chr10	-	2397	11	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	-5623	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_10	58.0965575572254	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	5889	False	NA	NA	False	NA	NA	NA	41628257	41594836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
tx.14380	chr4	-	2011	7	NIC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	192.098643641461	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAATTTTTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	134262400	134252872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262215
tx.14381	chr4	-	1999	7	FSM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	11	15	1	-1	multi-exon	FALSE	canonical	3	105	junction_6	159.506530691797	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	134262568	134252875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
tx.14382	chr4	-	1886	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	78	5	-11	2	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAATTTTTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	134262620	134252872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
tx.14383	chr4	-	3458	12	FSM	ENSMUSG00000050989.11	ENSMUST00000060435.8	3445	12	-14	1	-14	-1	multi-exon	FALSE	canonical	3	9	junction_3	3.13603423830188	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGTGCTTTTCCTTTG	8355	False	NA	NA	False	NA	NA	NA	134279491	134265203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272625_134272791_134273002_134275261_134275396_134278727_134278846_134279247
tx.14384	chr4	-	4711	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	-2	6	-2	-6	multi-exon	FALSE	canonical	3	25	junction_8	6.8947219003122	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCTTCCTGGCTGTATA	NA	False	NA	NA	False	NA	NA	NA	134431603	134289006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
tx.14385	chr4	-	2718	9	NNC	ENSMUSG00000037295.8	novel	6549	9	NA	NA	1	1162	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	22.3997767846021	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGAGTATTGCTGGT	NA	False	NA	NA	False	NA	NA	NA	134495334	134472724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477384_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
tx.14386	chr4	-	2671	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	20	3858	20	1164	multi-exon	TRUE	canonical	3	50	junction_1	8.8175960442742	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGAGTATTGCTGGTAA	NA	False	NA	NA	False	NA	NA	NA	134495315	134472722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
tx.14387	chr4	-	4085	12	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	71.6409781624045	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	134580647	134530069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134564077_134564346_134565159_134565302_134580348
tx.14388	chr4	-	3823	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	1	2	1	-2	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTAGTTTCCTGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	134580655	134530071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
tx.14389	chr4	-	3823	12	NNC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-608	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_11	55.9266047956332	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	134581264	134530069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348_134580605_134581215
tx.1439	chr10	-	2117	10	ISM	ENSMUSG00000019813.17	ENSMUST00000189770.7	2232	11	239	0	1	0	3prime_fragment	FALSE	canonical	3	43	junction_4	55.5797724996344	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	368	False	NA	NA	False	NA	NA	NA	41685625	41594836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
tx.14390	chr4	-	3515	9	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_8	62.8743787245647	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	134580614	134530069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134580348
tx.14391	chr4	-	5245	10	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-24	-4	intron_retention	FALSE	canonical	3	158	junction_8	23.6397865086138	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTAGTTTCCTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	134580680	134530073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134565302_134580348
tx.14392	chr4	-	1188	7	FSM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	15	1	6	-1	multi-exon	FALSE	canonical	3	544	junction_1	61.5938759582116	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTTCTCGTTATACCT	NA	False	NA	NA	False	NA	NA	NA	134642320	134625160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
tx.14393	chr4	-	1248	7	FSM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	12	-541	12	-1	multi-exon	FALSE	canonical	3	28	junction_6	233.0748568355	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTTCTCGTTATACCT	NA	False	NA	NA	False	NA	NA	NA	134642314	134625160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640573_134642199
tx.14394	chr4	+	2719	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	33	299	-1	0	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	859	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	NA	False	NA	NA	NA	134650935	134654683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
tx.14395	chr4	+	1691	2	ISM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	1978	299	124	0	3prime_fragment	FALSE	canonical	3	913	junction_1	0	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	NA	False	NA	NA	NA	134652880	134654683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_134654130_134654241
tx.14396	chr4	+	1304	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	56	9	52	-9	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	324	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCGAACAGTGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	134658264	134664850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
tx.14397	chr4	-	4070	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	49	0	49	0	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	3082	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135000076	134941279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
tx.14398	chr4	-	3881	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_16	359.875887384787	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	NA	False	NA	NA	NA	135080549	135047799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
tx.14399	chr4	-	3739	18	FSM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	3	-2	3	2	multi-exon	FALSE	canonical	3	58	junction_11	319.821966045795	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	NA	False	NA	NA	NA	135080552	135047799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.1440	chr10	-	2205	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	-23	-5	0	0	multi-exon	FALSE	canonical	3	114	junction_4	38.3583107031579	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	367	False	NA	NA	False	NA	NA	NA	41685626	41594836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
tx.14400	chr4	-	3661	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	317.863412158316	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	NA	False	NA	NA	NA	135080549	135047799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.14401	chr4	-	3744	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	13	-605	13	2	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	1290	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	NA	False	NA	NA	NA	135080542	135047799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.14402	chr4	-	3710	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	82	5	5	2	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	595	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	NA	False	NA	NA	NA	135080550	135047799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.14403	chr4	-	5080	5	FSM	ENSMUSG00000059713.13	ENSMUST00000030606.14	5111	5	29	2	-1	-2	multi-exon	FALSE	canonical	3	12	junction_4	34.9311823447189	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCATTGAGCAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	135161135	135139620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152757_135160922
tx.14404	chr4	-	5088	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCATTGAGCAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	135161145	135139619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
tx.14405	chr4	-	4790	3	ISM	ENSMUSG00000059713.13	ENSMUST00000030606.14	5111	5	13277	4	4691	-4	3prime_fragment	FALSE	canonical	3	66	junction_1	15.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCTCATTGAGCAGTCT	NA	False	NA	NA	False	NA	NA	NA	135147887	135139622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_135143910_135145690_135145863_135147556
tx.14407	chr4	-	997	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	31.244999599936	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGAGCAGTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	135161161	135139618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_135139802_135145690_135145863_135147556_135147731_135152524_135152754_135160922
tx.14408	chr4	-	4859	11	ISM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	3438	3	3321	-3	3prime_fragment	FALSE	canonical	2	39	junction_10	10.406248123123	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTCGGGTCCTGTGTTG	7626	False	NA	NA	False	NA	NA	NA	135218496	135176205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243
tx.14409	chr4	-	5054	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	91	8	-26	-8	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGAGTTCGGGTCCTG	4279	False	NA	NA	False	NA	NA	NA	135221843	135176210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
tx.1441	chr10	-	2171	11	NIC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	61.0777373516734	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	353	False	NA	NA	False	NA	NA	NA	41685640	41594836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685568
tx.14410	chr4	-	2476	13	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	-25	377	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	20.9103576142436	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGCTTTCTTCCTGTT	4280	False	NA	NA	False	NA	NA	NA	135221842	135178819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
tx.14411	chr4	+	1921	4	ISM	ENSMUSG00000028801.15	ENSMUST00000063707.3	2380	9	29107	101	29107	-101	3prime_fragment	FALSE	canonical	3	11	junction_1	4.02768199119819	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGGGTTCTTTGTGATC	NA	False	NA	NA	False	NA	NA	NA	135252404	135265013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_135252843_135256802_135256969_135260949_135261141_135263887
tx.14412	chr4	-	2787	16	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_11	58.2178285025778	110	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	NA	False	NA	NA	NA	135300942	135269198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
tx.14413	chr4	-	2790	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	-1	0	-1	0	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	NA	False	NA	NA	NA	135300942	135269198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
tx.14414	chr4	-	4004	2	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTTTATCATGTCATT	8583	False	NA	NA	False	NA	NA	NA	135389632	135384971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_135388708_135389364
tx.14415	chr4	+	4244	7	FSM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	-62	0	-62	0	multi-exon	TRUE	canonical	3	21	junction_5	3.02305952453618	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTGCACGCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	135413535	135435492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432363
tx.14416	chr4	+	3819	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	561.471875223209	56	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4681	False	NA	NA	False	NA	NA	NA	135583417	135597219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135594436
tx.14417	chr4	+	3110	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	551.676057321887	58	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4691	False	NA	NA	False	NA	NA	NA	135583427	135593126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590836_135590888_135591039
tx.14418	chr4	+	3112	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	533.493960186576	240	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4692	False	NA	NA	False	NA	NA	NA	135583428	135593126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
tx.14419	chr4	+	5010	4	ISM	ENSMUSG00000028676.18	ENSMUST00000105853.10	3058	6	3425	0	-2616	0	3prime_fragment	FALSE	canonical	3	1107	junction_3	89.9592500339274	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	7746	False	NA	NA	False	NA	NA	NA	135586482	135593126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_135589189_135590350_135590514_135590833_135590888_135591039
tx.1442	chr10	+	3567	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	242	0	242	0	multi-exon	FALSE	canonical	3	40	junction_1	18.7662686623146	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	234	False	NA	NA	False	NA	NA	NA	41686172	41784420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
tx.14420	chr4	-	1890	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	21	8	21	-8	multi-exon	FALSE	canonical	3	336	junction_2	18.5	298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCTAGTACATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	135601140	135598236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135599766_135600205_135600411_135600984
tx.14421	chr4	+	1499	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	4	1022	4	0	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	221	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGGTCAATCTCCCAA	NA	False	NA	NA	False	NA	NA	NA	135648049	135666600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
tx.14422	chr4	+	1397	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	17	4	0	-4	multi-exon	FALSE	canonical	3	659	junction_3	79.965617611571	544	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCAAACGTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	135673775	135689924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
tx.14423	chr4	+	1414	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	15	1	-15	-1	multi-exon	FALSE	canonical	3	107	junction_1	18.7712546197637	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGATTCTCACAGATGG	4577	False	NA	NA	False	NA	NA	NA	135691052	135695488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
tx.14424	chr4	-	1601	10	FSM	ENSMUSG00000028670.15	ENSMUST00000067567.5	1626	10	23	2	0	-2	multi-exon	TRUE	canonical	3	407	junction_1	24.7476149243608	271	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCTCCCTTATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	135699914	135695536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
tx.14425	chr4	-	1682	9	NIC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	428	junction_2	20.3127884594902	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCTCCCTTATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	135699919	135695536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
tx.14426	chr4	-	1529	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	29	142	29	-142	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	494	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTTTTCTTCTGTG	2144	False	NA	NA	False	NA	NA	NA	135714546	135702912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
tx.14427	chr4	-	2028	5	ISM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	30	144	30	-144	intron_retention	FALSE	canonical	3	496	junction_4	29.9614335438076	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTCTTTTCTTCTG	2145	False	NA	NA	False	NA	NA	NA	135714545	135702914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702
tx.14428	chr4	-	3965	8	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	10716	5	10716	-5	3prime_fragment	FALSE	canonical	3	104	junction_6	19.4327726550079	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACCTGCTGAGCCTTTC	NA	False	NA	NA	False	NA	NA	NA	135738358	135730683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539
tx.14429	chr4	-	4636	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	70	2	70	-2	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	257	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTGAGCCTTTCCTC	7774	False	NA	NA	False	NA	NA	NA	135749004	135730680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
tx.1443	chr10	+	2602	10	FSM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	34	junction_1	20.085619202938	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	NA	False	NA	NA	False	NA	NA	NA	41763432	41784420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
tx.14430	chr4	-	1201	5	FSM	ENSMUSG00000059291.16	ENSMUST00000125726.8	807	5	-351	-43	46	0	multi-exon	FALSE	canonical	3	383	junction_1	4361.44284469027	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	135780658	135777257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877
tx.14431	chr4	-	602	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	14	217	14	-1	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	993	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTACAGTTGTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	135780690	135777258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
tx.14432	chr4	+	4859	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	-120	0	-120	0	multi-exon	FALSE	canonical	1	25	junction_4	12.2395079784914	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTGGTGTGATTTC	936	False	NA	NA	False	NA	NA	NA	135899584	135923368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
tx.14433	chr4	+	4204	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	16	5	16	-5	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTAGGGTTCTGGTGATTG	1338	False	NA	NA	False	NA	NA	NA	135933691	135972522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
tx.14434	chr4	+	4431	3	FSM	ENSMUSG00000051351.15	ENSMUST00000130658.2	791	3	-36	-3604	1	-90	multi-exon	FALSE	canonical	3	10	junction_1	4	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTATCTTGGTAA	NA	False	NA	NA	False	NA	NA	NA	136013378	136021163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_136013793_136014499_136014627_136017273
tx.14435	chr4	+	4523	3	FSM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	22	94	-15	-94	multi-exon	FALSE	canonical	2	10	junction_1	4	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACTGAGTTATCTTG	NA	False	NA	NA	False	NA	NA	NA	136013399	136021159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_136013793_136014382_136014627_136017273
tx.14436	chr4	+	2511	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	29	3	3	-3	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	307	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTATTTCAAATTCAAT	NA	False	NA	NA	False	NA	NA	NA	136038281	136067989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
tx.14437	chr4	+	2676	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	4	3	4	-3	multi-exon	FALSE	canonical	3	160	junction_1	130.381325349914	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTATTTCAAATTCAAT	NA	False	NA	NA	False	NA	NA	NA	136038282	136067989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
tx.14438	chr4	+	2675	11	FSM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	8	18769	8	-3	multi-exon	FALSE	canonical	3	130	junction_1	138.01771625411	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTATTTCAAATTCAAT	NA	False	NA	NA	False	NA	NA	NA	136038286	136067989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_136038401_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
tx.14439	chr4	+	4705	2	ISM	ENSMUSG00000066037.15	ENSMUST00000084219.12	2647	10	25988	-975	940	975	3prime_fragment	FALSE	canonical	3	601	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCGTATATAAAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	136064323	136069149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_136066609_136066729
tx.1444	chr10	-	5590	2	ISM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	79148	4	60762	-4	3prime_fragment	FALSE	canonical	3	128	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCCCAGGAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	42073600	42057840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_42062292_42072461
tx.14440	chr4	+	7433	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	5	0	5	0	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGAGTCAGTGATGCC	4162	False	NA	NA	False	NA	NA	NA	136197076	136276630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
tx.14441	chr4	+	7524	5	FSM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	5	-3	5	0	multi-exon	FALSE	canonical	3	55	junction_3	50.5488624995657	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTGAGTCAGTGATGC	4162	False	NA	NA	False	NA	NA	NA	136197076	136276629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_136197162_136248651_136248755_136266435_136266528_136267666_136270830_136272548
tx.14442	chr4	+	5936	2	FSM	ENSMUSG00000001089.15	ENSMUST00000001116.5	7246	2	1311	-1	1311	0	multi-exon	FALSE	canonical	3	144	junction_1	0	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGAGTCAGTGATGCC	NA	False	NA	NA	False	NA	NA	NA	136268975	136276630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_136270830_136272548
tx.14443	chr4	-	3012	19	FSM	ENSMUSG00000036940.16	ENSMUST00000116273.9	3008	19	-14	10	-14	-6	multi-exon	FALSE	canonical	3	907	junction_17	208.707545398275	1321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATTTATTTTTAATTG	NA	False	NA	NA	False	NA	NA	NA	136330048	136277860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
tx.14444	chr4	-	3071	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	-51	8	-15	-8	multi-exon	FALSE	canonical	3	991	junction_18	209.393504887799	1755	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAATTTATTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	136330049	136277862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
tx.14445	chr4	-	4852	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105845.9	10902	16	-23	6073	-23	-4	multi-exon	FALSE	canonical	3	19	junction_7	4.97728172131469	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGACCCCTGTACTCTG	NA	False	NA	NA	False	NA	NA	NA	136563322	136380922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
tx.14446	chr4	-	4147	16	FSM	ENSMUSG00000028664.15	ENSMUST00000059287.14	4804	16	-21	678	-3	360	multi-exon	FALSE	canonical	1	3	junction_10	7.67390962214756	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATTTCTGGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	136563288	136381596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402845_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
tx.14447	chr4	-	7294	19	NIC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	15	junction_6	4.22697101369495	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTGTTTCAG	9679	False	NA	NA	False	NA	NA	NA	136776111	136707042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716074_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
tx.14448	chr4	-	2028	5	ISM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	21589	7	21568	-7	3prime_fragment	FALSE	canonical	3	1798	junction_1	43.0203440246588	336	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGAGCCTGAAGGTTAT	NA	False	NA	NA	False	NA	NA	NA	137063442	137047013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285
tx.14449	chr4	-	2084	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	17	7	-4	-7	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	1249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGAGCCTGAAGGTTAT	NA	False	NA	NA	False	NA	NA	NA	137085014	137047013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
tx.1445	chr10	-	6824	3	ISM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	1000	4	944	-4	3prime_fragment	FALSE	canonical	3	128	junction_1	3	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCCCAGGAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	42151748	42057840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_42062292_42072461_42073898_42150811
tx.14450	chr4	-	1452	6	FSM	ENSMUSG00000006699.18	ENSMUST00000030417.10	1448	6	-9	5	-9	-5	multi-exon	FALSE	canonical	3	65	junction_1	708.103664727136	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACGCCTGGTGAAGCTT	NA	False	NA	NA	False	NA	NA	NA	137085019	137049077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_137049931_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
tx.14451	chr4	+	4797	27	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	83292	1	-17076	-1	3prime_fragment	FALSE	canonical	3	28	junction_1	14.1755686151255	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	1817	False	NA	NA	False	NA	NA	NA	137279405	137297939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
tx.14452	chr4	+	5742	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	555	junction_19	264.570952206992	392	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	551	False	NA	NA	False	NA	NA	NA	137321498	137385840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
tx.14453	chr4	+	5684	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	584	junction_9	231.427832630339	416	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	552	False	NA	NA	False	NA	NA	NA	137321499	137385840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
tx.14454	chr4	+	5683	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	659	junction_9	223.123509724359	519	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	556	False	NA	NA	False	NA	NA	NA	137321503	137385840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
tx.14455	chr4	+	5738	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	-19	3	-19	-2	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	323	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	551	False	NA	NA	False	NA	NA	NA	137321498	137385839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
tx.14456	chr4	+	6795	16	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-161	-1	intron_retention	FALSE	canonical	3	682	junction_8	235.368326010296	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	NA	False	NA	NA	False	NA	NA	NA	137345620	137385840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
tx.14457	chr4	+	3236	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	40.9493208845687	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	3342	False	NA	NA	False	NA	NA	NA	137392041	137457171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
tx.14458	chr4	+	3271	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	41.4733385102208	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	3338	False	NA	NA	False	NA	NA	NA	137392037	137457171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
tx.14459	chr4	+	3264	25	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	42.7395008224892	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	3351	False	NA	NA	False	NA	NA	NA	137392050	137457172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137392156_137410771_137410808_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
tx.1446	chr10	-	6800	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	44	4	-12	-4	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCCCAGGAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	42152704	42057840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
tx.14460	chr4	+	3228	23	FSM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	-60	0	-60	0	multi-exon	FALSE	canonical	3	26	junction_1	40.603123480388	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	9890	False	NA	NA	False	NA	NA	NA	137434772	137457172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
tx.14461	chr4	+	2410	9	NIC	ENSMUSG00000041351.17	novel	3247	25	NA	NA	1047	0	intron_retention	FALSE	canonical	3	96	junction_1	15.0893174133226	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	NA	False	NA	NA	NA	137447229	137457171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455675_137455838_137455880_137456185
tx.14462	chr4	+	1964	10	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	1045	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	31.0304509939654	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	NA	False	NA	NA	NA	137447227	137457172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
tx.14463	chr4	+	1933	10	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	12395	0	1045	0	3prime_fragment	FALSE	canonical	3	83	junction_7	18.9326290948839	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	NA	False	NA	NA	NA	137447227	137457172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
tx.14464	chr4	+	1269	5	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	19520	0	-720	0	3prime_fragment	FALSE	canonical	3	83	junction_2	20.9045449603669	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	1025	False	NA	NA	False	NA	NA	NA	137454352	137457172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
tx.14465	chr4	-	2485	12	FSM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	34	3	34	-3	multi-exon	FALSE	canonical	3	1320	junction_11	106.491531498949	2616	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGAGCTGAGTCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	137523661	137469046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
tx.14466	chr4	+	4720	19	NIC	ENSMUSG00000057530.15	novel	4816	20	NA	NA	9	-1	combination_of_known_junctions	TRUE	canonical	3	26	junction_1	12.6238310789994	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTGTCTGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	137589556	137692539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137589693_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
tx.14467	chr4	+	4785	20	FSM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	28	3	28	-3	multi-exon	FALSE	canonical	1	1	junction_1	20.7320325707644	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCAGTGTGTCTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	137589575	137692537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_137589693_137632380_137632467_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
tx.14468	chr4	+	4711	19	NIC	ENSMUSG00000057530.15	novel	728	5	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	12.6238310789994	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	489	False	NA	NA	False	NA	NA	NA	137640814	137692540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137640941_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
tx.14469	chr4	+	189	1	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTGTGCATGGGAA	NA	False	NA	NA	False	NA	NA	NA	137787611	137787800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_137787600_137787800
tx.1447	chr10	-	6002	3	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2112	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAGGAGTCTGTCATC	NA	False	NA	NA	False	NA	NA	NA	42150580	42057836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_42062292_42072461_42073898_42150469
tx.14470	chr4	+	3305	13	FSM	ENSMUSG00000028759.14	ENSMUST00000030541.13	3311	13	-11	17	-10	5	multi-exon	FALSE	canonical	3	41	junction_1	22.3320895176027	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACAGCTTAGTGAAAAG	4554	False	NA	NA	False	NA	NA	NA	137943926	137970464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.14471	chr4	+	3100	12	FSM	ENSMUSG00000028759.14	ENSMUST00000097836.10	3113	12	0	13	0	9	multi-exon	FALSE	canonical	3	37	junction_1	20.9126479187884	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTTAGTGAAAAGTTTC	4565	False	NA	NA	False	NA	NA	NA	137943937	137970468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_137944052_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.14472	chr4	+	3260	13	NIC	ENSMUSG00000028759.14	novel	3311	13	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	30.5586867082559	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTAGTGAAAAGTTTCC	4565	False	NA	NA	False	NA	NA	NA	137943937	137970469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137944052_137948836_137949035_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.14473	chr4	+	3091	12	NIC	ENSMUSG00000028759.14	novel	3113	12	NA	NA	-11	5	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	30.9291378840073	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTACCTGTCCTGCAAT	4553	False	NA	NA	False	NA	NA	NA	137943925	137970486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137944052_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.14474	chr4	+	3126	12	NIC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	22	7	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.9615581863273	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGCTTAGTGAAAAGTT	5091	False	NA	NA	False	NA	NA	NA	137944463	137970466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137944606_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.14475	chr4	+	3303	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	39	19	39	3	multi-exon	FALSE	canonical	3	21	junction_1	26.2752524039045	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACTACAGCTTAGTGAAA	5108	False	NA	NA	False	NA	NA	NA	137944480	137970462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.14476	chr4	+	3849	5	ISM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	15446	22	2920	0	3prime_fragment	FALSE	canonical	3	85	junction_4	12.6589889011722	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAACTACAGCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	137959887	137970459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.14477	chr4	+	1988	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	115	17	115	-17	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	2511	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGCTCTAGGTCCTAT	NA	False	NA	NA	False	NA	NA	NA	138032155	138039922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
tx.14478	chr4	-	2344	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	34	-3	-33	0	multi-exon	FALSE	canonical	3	101	junction_7	15.5261464790783	168	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTACACTGGAGCCAA	NA	False	NA	NA	False	NA	NA	NA	138053584	138040719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
tx.14479	chr4	+	4434	5	NNC	ENSMUSG00000041241.13	novel	3733	4	NA	NA	16	764	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	87.7638877899105	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACGGTTGCCACCTCT	NA	False	NA	NA	False	NA	NA	NA	138162003	138170340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261_138169100_138169140
tx.1448	chr10	-	2362	12	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	3142	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	18.3127106650224	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	NA	False	NA	NA	NA	42351134	42188580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42350930
tx.14480	chr4	+	1360	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	20	2353	14	901	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTCTCCGACTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	138162001	138167223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
tx.14481	chr4	+	2507	2	FSM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	-44	1981	-44	-1981	multi-exon	FALSE	canonical	3	239	junction_1	0	242	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTTCGTTAGCCTTGT	5700	False	NA	NA	False	NA	NA	NA	138181580	138185453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_138182663_138184028
tx.14482	chr4	+	664	3	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	52	junction_1	9.5	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTATATCTTTTCTGA	4294	False	NA	NA	False	NA	NA	NA	138225895	138255983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_138226002_138226562_138226737_138255599
tx.14483	chr4	+	1639	6	FSM	ENSMUSG00000028750.13	ENSMUST00000030530.6	1618	6	-21	0	-21	0	multi-exon	FALSE	canonical	1	1	junction_2	1.01980390271856	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCTGGTGTCTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	138452614	138471886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_138452800_138453041_138453169_138458834_138458936_138461572_138461718_138463292_138463397_138470909
tx.14484	chr4	-	2138	6	FSM	ENSMUSG00000041193.16	ENSMUST00000030524.14	2131	6	-12	5	1	-5	multi-exon	FALSE	canonical	3	70	junction_2	8.52291030106501	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAATTCACATGTTTTG	NA	False	NA	NA	False	NA	NA	NA	138590792	138526564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480
tx.14485	chr4	-	1691	8	FSM	ENSMUSG00000041161.9	ENSMUST00000097830.4	1668	8	-23	0	-23	0	multi-exon	TRUE	canonical	3	21	junction_7	2.1380899352994	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTTTCTCTCTCATT	NA	False	NA	NA	False	NA	NA	NA	138641279	138622689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_138623226_138624026_138624209_138624867_138624965_138625317_138625450_138629162_138629286_138632467_138632581_138636792_138636942_138640920
tx.14486	chr4	+	3050	17	NIC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	17.3561048337465	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGGTTCTTCTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	138700187	138786480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_138700301_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
tx.14487	chr4	+	3043	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	276	-1	272	1	multi-exon	FALSE	canonical	3	56	junction_1	8.00780868902348	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGGGTTCTTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	138700491	138786479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
tx.14488	chr4	-	509	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	70	1970	-49	7	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	344	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATGCCTTTATTCCTT	5249	False	NA	NA	False	NA	NA	NA	138858354	138831094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
tx.14489	chr4	+	1642	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	28	4	3	0	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	1009	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCGGCGCTGGCTGTAC	NA	False	NA	NA	False	NA	NA	NA	138920237	139019125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
tx.1449	chr10	-	2387	13	FSM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	126	0	-24	0	multi-exon	FALSE	canonical	3	47	junction_11	7.72801541291309	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	NA	False	NA	NA	NA	42354435	42188580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
tx.14490	chr4	-	1499	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	36	-3	6	3	multi-exon	FALSE	canonical	3	103	junction_8	18.155147341732	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTCTGCTGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	139037983	139025835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
tx.14491	chr4	+	1290	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	-3	1	-3	-1	multi-exon	FALSE	canonical	3	253	junction_5	35.9787746070127	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTCTCCTCTGCTGCC	NA	False	NA	NA	False	NA	NA	NA	139038051	139045736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
tx.14492	chr4	-	1179	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	35	7	-8	3	multi-exon	FALSE	canonical	3	786	junction_5	119.708489460771	492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTCTTTTTTTTTTT	5731	False	NA	NA	False	NA	NA	NA	139079852	139074752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
tx.14493	chr4	+	4937	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	-10	-221	7	221	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	799	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTTGTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	139079910	139104768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
tx.14494	chr4	+	3152	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	227	3	-16	0	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	242	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATTTTGATCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	139350403	139376998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
tx.14495	chr4	-	2001	10	FSM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	-27	5	-27	-5	multi-exon	FALSE	canonical	3	57	junction_6	13.4421485642992	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGTCTGGCCCTATAT	NA	False	NA	NA	False	NA	NA	NA	139974122	139754161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
tx.14496	chr4	+	1794	2	NIC	ENSMUSG00000087084.2	novel	1720	3	NA	NA	-168	34	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTAAGTCTTCTCCGTG	NA	False	NA	NA	False	NA	NA	NA	140107772	140112919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_140108031_140111383
tx.14497	chr4	-	4444	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	-62	0	-62	0	multi-exon	TRUE	canonical	3	130	junction_20	26.9722901858523	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	NA	False	NA	NA	NA	140376129	140241795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
tx.14498	chr4	-	4569	28	NIC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	53.9528321154549	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	NA	False	NA	NA	NA	140376129	140241795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
tx.14499	chr4	-	4570	28	FSM	ENSMUSG00000040964.17	ENSMUST00000039204.10	4493	28	-78	1	-72	-1	multi-exon	FALSE	canonical	3	51	junction_21	42.1702734351014	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	NA	False	NA	NA	NA	140376139	140241796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
tx.1450	chr10	+	1260	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	141	0	-118	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	1242	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	NA	False	NA	NA	NA	42378167	42411366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
tx.14500	chr4	+	3750	13	FSM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	11	6	11	-6	multi-exon	FALSE	canonical	3	3313	junction_2	495.610285966257	5378	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	2392	False	NA	NA	False	NA	NA	NA	140428794	140450525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
tx.14501	chr4	+	3624	12	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	633	6	633	-6	3prime_fragment	FALSE	canonical	3	3313	junction_1	471.181177976518	346	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	3014	False	NA	NA	False	NA	NA	NA	140429416	140450525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
tx.14502	chr4	+	4053	10	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	8007	6	-4871	-6	3prime_fragment	FALSE	canonical	3	3941	junction_8	344.75609556917	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	NA	False	NA	NA	False	NA	NA	NA	140436790	140450525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
tx.14503	chr4	-	2558	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-57	-185	-57	185	multi-exon	TRUE	canonical	3	76	junction_4	15.9114214743163	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCACGGCTGGCAAGAT	NA	False	NA	NA	False	NA	NA	NA	140501604	140472990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
tx.14504	chr4	-	3115	16	FSM	ENSMUSG00000025328.10	ENSMUST00000026377.9	3072	16	-43	0	-43	0	multi-exon	FALSE	canonical	2	14	junction_8	5.0710507348631	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTTGGCCTTTC	NA	False	NA	NA	False	NA	NA	NA	140538002	140512675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_140513946_140516147_140516274_140517023_140517104_140518473_140518577_140518668_140518814_140520288_140520441_140521147_140521256_140522923_140523036_140523123_140523228_140523647_140523827_140525359_140525486_140526215_140526334_140527391_140527454_140528855_140528929_140530777_140530959_140537826
tx.14505	chr4	+	1503	2	NNC	ENSMUSG00000085918.2	novel	2001	3	NA	NA	3406	258	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCAGACTTAGCTCATC	NA	False	NA	NA	False	NA	NA	NA	140541709	140545080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_140542139_140544006
tx.14506	chr4	+	4752	16	FSM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	16	6	16	-6	multi-exon	FALSE	canonical	3	23	junction_7	9.97463449622759	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACGCGGCTCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	140633670	140679891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_140633861_140644883_140645068_140646618_140646692_140651624_140651687_140653446_140653565_140654403_140654530_140659375_140659555_140660057_140660162_140660483_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
tx.14507	chr4	+	3729	8	ISM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	26818	4	9003	-4	3prime_fragment	FALSE	canonical	3	24	junction_3	9.73527144994333	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACGCGGCTCTGGGTGAC	NA	False	NA	NA	False	NA	NA	NA	140660472	140679893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
tx.14508	chr4	+	962	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	180	0	-18	0	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	1115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	140688693	140706504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
tx.14509	chr4	+	3934	29	FSM	ENSMUSG00000036622.16	ENSMUST00000037055.14	3956	29	22	0	-5	0	multi-exon	FALSE	canonical	3	40	junction_19	18.6368011510253	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1424	False	NA	NA	False	NA	NA	NA	140714205	140734641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
tx.1451	chr10	+	3004	6	FSM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	2	0	2	0	multi-exon	FALSE	canonical	3	210	junction_2	7.54718490564528	396	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATGTTGTAATTGAAT	NA	False	NA	NA	False	NA	NA	NA	42554913	42578455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
tx.14510	chr4	+	3866	29	FSM	ENSMUSG00000036622.16	ENSMUST00000127833.3	3882	29	16	0	-11	0	multi-exon	FALSE	canonical	3	40	junction_19	21.6883068279021	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1418	False	NA	NA	False	NA	NA	NA	140714199	140734641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
tx.14511	chr4	+	4112	28	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	-8	0	intron_retention	FALSE	canonical	3	40	junction_19	18.4710502737861	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1421	False	NA	NA	False	NA	NA	NA	140714202	140734641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140734160_140734251
tx.14512	chr4	-	6648	38	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	54	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_37	17.8135379120419	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGTCCACTCAAATG	NA	False	NA	NA	False	NA	NA	NA	140787802	140743947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787669
tx.14513	chr4	-	6542	38	NIC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_37	17.566278538987	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGTCCACTCAAATG	NA	False	NA	NA	False	NA	NA	NA	140787860	140743947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787833
tx.14514	chr4	-	4173	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	12	-1	intron_retention	TRUE	canonical	3	431	junction_1	26.7810048770061	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAGATGGATATGTTTT	8512	False	NA	NA	False	NA	NA	NA	140805641	140793823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_140794924_140795505_140795591_140797366_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
tx.14515	chr4	-	1874	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	30	2	15	-2	multi-exon	FALSE	canonical	3	362	junction_3	45.6883855200484	420	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCAGATGGATATGTTT	8515	False	NA	NA	False	NA	NA	NA	140805638	140793824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
tx.14516	chr4	-	3227	4	FSM	ENSMUSG00000040842.18	ENSMUST00000148204.8	3202	4	-42	17	-3	-17	multi-exon	FALSE	canonical	3	37	junction_2	172.554017307303	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACATTTGTCCTCATTT	NA	False	NA	NA	False	NA	NA	NA	140867080	140840328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_140843176_140845837_140846090_140847634_140847685_140867002
tx.14517	chr4	-	902	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	7	2294	-2	1272	multi-exon	FALSE	canonical	3	212	junction_2	123	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCTATTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	140867079	140842605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_140843176_140845837_140846093_140867002
tx.14518	chr4	-	897	3	FSM	ENSMUSG00000040842.18	ENSMUST00000039939.7	3200	3	10	2293	1	1273	multi-exon	FALSE	canonical	3	50	junction_2	204	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTATTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	140867076	140842604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_140843176_140845837_140846090_140867002
tx.14519	chr4	-	3224	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	-2	22	-2	-22	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTCAGACATTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	140867079	140840333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
tx.1452	chr10	+	3830	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	75	2127	-44	-5	multi-exon	TRUE	canonical	3	208	junction_15	23.0789947788026	437	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAATTTTTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	42637566	42706383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
tx.14520	chr4	+	5915	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	17	2	8	-2	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTTTTATTAGTA	NA	False	NA	NA	False	NA	NA	NA	140875240	140931371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
tx.14521	chr4	+	5641	9	ISM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	19818	8	19809	-8	3prime_fragment	FALSE	canonical	3	178	junction_1	14.0706920583175	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTCTTAACTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	140895041	140931365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
tx.14522	chr4	+	2162	6	FSM	ENSMUSG00000073733.5	ENSMUST00000097813.3	985	6	19	-1196	19	1196	multi-exon	FALSE	canonical	2	5	junction_2	1.26491106406735	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAACAAAAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	140941285	140948655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_140941375_140941633_140941784_140944562_140944716_140945415_140945541_140945848_140945986_140947147
tx.14523	chr4	+	3532	17	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	14.2531520636665	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTAGCATCTGCTTC	373	False	NA	NA	False	NA	NA	NA	140966885	140984875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
tx.14524	chr4	+	3679	18	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.2438244298896	43	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTAGCATCTGCTTC	375	False	NA	NA	False	NA	NA	NA	140966887	140984875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
tx.14525	chr4	+	3808	17	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-5176	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	33.5838502855167	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGCTTTCATTCCTG	9565	False	NA	NA	False	NA	NA	NA	141023374	141056693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_141023467_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
tx.14526	chr4	+	3916	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	-4	1	-4	-1	multi-exon	FALSE	canonical	3	98	junction_7	17.9965274428152	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	NA	False	NA	NA	False	NA	NA	NA	141028546	141056694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
tx.14527	chr4	+	3586	15	ISM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	7228	1	-426	-1	3prime_fragment	FALSE	canonical	3	98	junction_5	18.2303850418885	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	NA	False	NA	NA	False	NA	NA	NA	141035778	141056694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
tx.14528	chr4	+	1510	7	FSM	ENSMUSG00000006218.5	ENSMUST00000006380.5	1433	7	-78	1	-78	-1	multi-exon	FALSE	canonical	3	37	junction_5	7.90393713425292	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAACTTGACCTGGTCTT	7108	False	NA	NA	False	NA	NA	NA	141095452	141111485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_141095636_141106988_141107105_141107629_141107666_141107912_141108007_141109637_141109821_141110054_141110166_141110698
tx.14529	chr4	-	3377	2	NIC	ENSMUSG00000006216.11	novel	2490	19	NA	NA	-2957	-4	intron_retention	FALSE	canonical	3	126	junction_1	0	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4178	False	NA	NA	False	NA	NA	NA	141135625	141131667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_141134534_141135114
tx.1453	chr10	-	3117	3	NNC	ENSMUSG00000038248.9	novel	4980	7	NA	NA	92674	-17570	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	1	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACAGAAAGAAGAGAAATG	NA	False	NA	NA	False	NA	NA	NA	42957843	42896065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_42898915_42950588_42950685_42957671
tx.14530	chr4	+	2722	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	4	-4	4	4	multi-exon	FALSE	canonical	3	129	junction_3	19.5436832648187	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	NA	False	NA	NA	NA	141171968	141194540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
tx.14531	chr4	+	2828	16	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-31	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_5	44.2053792603972	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTGTGGTCCCTGTG	NA	False	NA	NA	False	NA	NA	NA	141171933	141194536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190908_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
tx.14532	chr4	+	602	3	ISM	ENSMUSG00000006215.13	ENSMUST00000130482.2	867	7	1018	-160	1018	4	3prime_fragment	FALSE	canonical	3	182	junction_1	5.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	71	False	NA	NA	False	NA	NA	NA	141193743	141194540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_141193869_141193984_141194075_141194153
tx.14533	chr4	-	5505	5	ISM	ENSMUSG00000040761.17	ENSMUST00000078886.10	12082	15	63578	0	-3378	0	3prime_fragment	FALSE	canonical	3	63	junction_4	11.6833214455479	55	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTGTGAAGGTGGTT	8182	False	NA	NA	False	NA	NA	NA	141202182	141195200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680
tx.14534	chr4	-	2962	8	ISM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	2273	0	518	0	3prime_fragment	FALSE	canonical	3	1168	junction_5	184.331002187226	356	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	141323262	141303372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205
tx.14535	chr4	-	3103	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	141325568	141303372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
tx.14536	chr4	-	2980	9	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_8	517.29825475735	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	141327214	141303372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323225_141327158
tx.14537	chr4	-	3031	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	5	0	5	0	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1794	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	141327230	141303372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
tx.14538	chr4	-	3021	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	141327318	141303372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
tx.14539	chr4	-	2540	5	FSM	ENSMUSG00000043085.15	ENSMUST00000156246.2	2478	5	-58	-4	-58	0	multi-exon	FALSE	canonical	3	69	junction_2	19.536824204563	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	NA	False	NA	NA	NA	141345350	141341543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141342018_141342255_141343933_141344605_141344781_141344950_141345024_141345209
tx.1454	chr10	-	3152	6	ISM	ENSMUSG00000038248.9	ENSMUST00000040275.9	4980	7	-77	18472	-77	-18472	5prime_fragment	FALSE	canonical	0	0	junction_2	2.60768096208106	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGGGCGTTCCTCCAA	NA	False	NA	NA	False	NA	NA	NA	43050603	42896967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_42898915_42950588_42950685_43003774_43003927_43033903_43034090_43036701_43036841_43049971
tx.14540	chr4	-	1472	6	FSM	ENSMUSG00000043085.15	ENSMUST00000053263.9	1671	6	199	0	-58	0	multi-exon	FALSE	canonical	3	57	junction_2	22.4535075210979	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	NA	False	NA	NA	NA	141345350	141341543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
tx.14541	chr4	-	3217	4	NIC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-58	4	intron_retention	FALSE	canonical	3	77	junction_1	16.391054470859	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGAGGATCACAGTGGCA	NA	False	NA	NA	False	NA	NA	NA	141345350	141341539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_141342018_141342255_141344781_141344950_141345024_141345209
tx.14542	chr4	-	4100	19	ISM	ENSMUSG00000028917.15	ENSMUST00000030751.5	4154	20	755	2	-26	-2	3prime_fragment	FALSE	canonical	3	16	junction_18	6.60363723196225	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGTCGCTGACCCTC	7285	False	NA	NA	False	NA	NA	NA	141391455	141353046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
tx.14543	chr4	-	4692	20	FSM	ENSMUSG00000028917.15	ENSMUST00000084203.11	4136	20	-556	0	225	0	multi-exon	FALSE	canonical	2	5	junction_14	9.89893527949294	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTCGCTGACCCTCTT	6755	False	NA	NA	False	NA	NA	NA	141391985	141353044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141364735_141364796_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
tx.14544	chr4	-	3567	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-27	-1	-27	1	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	454	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTAGAATGAGTGAGT	NA	False	NA	NA	False	NA	NA	NA	141450757	141410872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
tx.14545	chr4	-	3965	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	205	1799	205	-1799	multi-exon	TRUE	canonical	3	44	junction_12	6.2974727681274	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGGCTTCATTCTTCC	NA	False	NA	NA	False	NA	NA	NA	141517997	141489298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
tx.14546	chr4	+	3787	9	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	54.6601717432355	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTTGGCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	141521026	141543284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
tx.14547	chr4	+	3921	10	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.5389492289435	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCATGTTGGCATTTTT	NA	False	NA	NA	False	NA	NA	NA	141521032	141543283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_141521298_141521680_141521819_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
tx.14548	chr4	+	3780	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	115	2	17	-2	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGGCATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	141521037	141543285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
tx.14549	chr4	+	3724	10	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	79.3330220971175	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	False	NA	NA	False	NA	NA	NA	141521143	141543287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_141521298_141523622_141523671_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
tx.1455	chr10	+	2136	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	-9	0	-9	0	multi-exon	FALSE	canonical	3	61	junction_4	6.25316246521123	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	NA	NA	NA	43097472	43316598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
tx.14550	chr4	-	662	3	FSM	ENSMUSG00000058579.6	ENSMUST00000127962.2	468	3	-194	0	-194	0	multi-exon	FALSE	canonical	3	93	junction_1	12.5	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	341	False	NA	NA	False	NA	NA	NA	141546707	141542272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141542367_141545175_141545329_141546292
tx.14551	chr4	-	2209	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	-19	191	-19	-191	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	497	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGTGGTTTTTGAT	3857	False	NA	NA	False	NA	NA	NA	141602250	141585643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
tx.14552	chr4	-	1406	8	FSM	ENSMUSG00000051435.12	ENSMUST00000036701.8	1366	8	-46	6	-46	-6	multi-exon	FALSE	canonical	2	6	junction_4	3.33197251134017	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAATGATAGTGTTTCAT	3670	False	NA	NA	False	NA	NA	NA	141660446	141643605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141643864_141645584_141645692_141646058_141646144_141648047_141648274_141649554_141649729_141655690_141655796_141656840_141656949_141660103
tx.14553	chr4	+	634	2	FSM	ENSMUSG00000085761.2	ENSMUST00000126231.2	630	2	-1	-3	-1	3	multi-exon	FALSE	canonical	2	4	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGTAAAGTTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	141745207	141756310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_141745442_141755910
tx.14554	chr4	-	2110	3	NNC	ENSMUSG00000040616.4	novel	1875	3	NA	NA	-658	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	75.5	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9991	False	NA	NA	False	NA	NA	NA	141812273	141758302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_141759406_141764715_141765245_141811795
tx.14555	chr4	-	1633	2	ISM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	46369	1	46369	-1	3prime_fragment	FALSE	canonical	3	181	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGACCTCATTCAGTC	NA	False	NA	NA	False	NA	NA	NA	141765246	141758303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_141759406_141764715
tx.14556	chr4	-	1804	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	71	0	71	0	multi-exon	FALSE	canonical	3	173	junction_2	4	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9871	False	NA	NA	False	NA	NA	NA	141811544	141758302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141759406_141764715_141765245_141811372
tx.14557	chr4	-	4927	15	NIC	ENSMUSG00000040606.15	novel	4898	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	104.248232011632	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTTTCTTGTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	141966723	141829700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
tx.14559	chr4	-	3848	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	-8	3	-8	0	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	310	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAATTCTATGTGATT	NA	False	NA	NA	False	NA	NA	NA	141966720	141866553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
tx.1456	chr10	+	6199	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	153	-15	153	15	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCTTTAACGCTTCA	NA	False	NA	NA	False	NA	NA	NA	43354979	43391407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
tx.14560	chr4	-	4741	2	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	59791	-20078	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGGACTGCATTTTGT	NA	False	NA	NA	False	NA	NA	NA	142861514	142854038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_142855545_142858279
tx.14561	chr4	-	9410	8	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	-10	20084	-6	-20084	5prime_fragment	FALSE	canonical	3	22	junction_5	9.80420567815628	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTGTGAAAGGACTGCA	NA	False	NA	NA	False	NA	NA	NA	142939285	142854044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
tx.14562	chr4	-	6734	10	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-4	-20080	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	11.2447518622887	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAAAGGACTGCATTTT	NA	False	NA	NA	False	NA	NA	NA	142939283	142854040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
tx.14563	chr4	-	6676	9	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-2	-20079	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	9.44722181384559	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAAGGACTGCATTTTG	NA	False	NA	NA	False	NA	NA	NA	142939281	142854039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
tx.14565	chr4	-	5892	4	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	32571	-20302	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	4.18993502999218	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGTTCATTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	142888734	142854262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625
tx.14566	chr4	-	8437	3	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	50544	20489	32574	-20489	internal_fragment	FALSE	canonical	3	47	junction_2	3.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAATTGTTTTGGGTGCT	NA	False	NA	NA	False	NA	NA	NA	142888731	142854449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_142862670_142868693_142868805_142888625
tx.14567	chr4	-	1773	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	59	-15	-42	15	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	564	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCCATTGACTTTAGA	NA	False	NA	NA	False	NA	NA	NA	143026075	142993985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
tx.14568	chr4	+	3431	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	455	0	-91	0	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	143139450	143147661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
tx.14569	chr4	+	3350	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-90	0	-75	0	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	143139466	143147661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
tx.1457	chr10	-	811	3	ISM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	7806	25	-7319	1	3prime_fragment	FALSE	canonical	3	928	junction_2	15	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAAAGTTCTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	43409158	43401153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_43401405_43406593_43406667_43408671
tx.14570	chr4	+	185	2	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATATCTGTTGTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	143193040	143246479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_143193187_143246440
tx.14571	chr4	+	2665	4	NNC	ENSMUSG00000078508.2	novel	1745	3	NA	NA	-3301	784	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	5.90668171555645	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTATTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	144053517	144060819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_144053628_144056792_144057106_144057681_144058255_144059150
tx.14572	chr4	+	2484	3	FSM	ENSMUSG00000078508.2	ENSMUST00000105751.2	1745	3	45	-784	45	784	multi-exon	FALSE	canonical	3	38	junction_1	0.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTATTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	144056863	144060819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_144057106_144057681_144058255_144059150
tx.14573	chr4	+	2329	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	-559	567	-309	0	multi-exon	FALSE	canonical	3	137	junction_1	25.4982352330509	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTCGTTCACGTGTT	5387	False	NA	NA	False	NA	NA	NA	144619087	144654212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
tx.14574	chr4	+	1413	7	FSM	ENSMUSG00000066026.15	ENSMUST00000171001.8	1349	7	-67	3	-67	0	multi-exon	FALSE	canonical	1	1	junction_1	68.47627326308	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTCGTTCACGTGTT	5629	False	NA	NA	False	NA	NA	NA	144619329	144654212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_144619481_144620154_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
tx.14575	chr4	-	3347	5	ISM	ENSMUSG00000020220.17	ENSMUST00000185113.2	10176	52	135215	-1970	30763	0	3prime_fragment	FALSE	canonical	3	34	junction_2	4.63680924774785	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTGGTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	144746841	144699195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706
tx.14576	chr4	-	3819	10	FSM	ENSMUSG00000028599.11	ENSMUST00000030336.11	3818	10	-2	1	-2	-1	multi-exon	FALSE	canonical	3	41	junction_7	11.2546286774228	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGCTTATCTGTTTGT	7830	False	NA	NA	False	NA	NA	NA	144973442	144940033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
tx.14577	chr4	+	4396	2	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14338	2914	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	0	17	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTATCCTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	145158971	145180372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_145159032_145176036
tx.14578	chr4	+	2995	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	-4	5	-4	-5	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	384	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTTGCTTTGATTGTTT	890	False	NA	NA	False	NA	NA	NA	145237324	145265753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
tx.14579	chr4	-	3388	2	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	26	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAGAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	146519182	146515611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_146515762_146515944
tx.1458	chr10	-	867	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	-27	20	-1	6	multi-exon	TRUE	canonical	3	617	junction_3	154.165135127528	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTCTCCTGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	43416991	43401148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
tx.14581	chr4	+	6882	6	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-84	3831	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.793035873962	18	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACATAGTGGAAAATGT	NA	False	NA	NA	False	NA	NA	NA	147390046	147422022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_147390233_147398491_147398579_147400358_147400439_147409230_147409335_147413438_147413566_147415724
tx.14582	chr4	-	4491	2	ISM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	24850	-2	24838	0	3prime_fragment	FALSE	canonical	3	457	junction_1	0	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	540	False	NA	NA	False	NA	NA	NA	147702115	147696393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_147698506_147699736
tx.14583	chr4	-	2586	5	FSM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	-26	-2	-21	0	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	555	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	147726991	147696393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
tx.14584	chr4	-	2574	4	NIC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	106.377733676847	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	8382	False	NA	NA	False	NA	NA	NA	147860281	147838430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_147840693_147842158_147842286_147845677_147845736_147860154
tx.14585	chr4	-	526	4	FSM	ENSMUSG00000059423.14	ENSMUST00000105718.8	4238	4	-50	3762	-50	-1	multi-exon	FALSE	canonical	3	42	junction_2	6.37704215656966	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATGTAATCAGTGTGG	3891	False	NA	NA	False	NA	NA	NA	147932873	147911204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_147911404_147912866_147912928_147913126_147913254_147932734
tx.14586	chr4	-	1856	11	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	96.0689856301189	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	NA	False	NA	NA	NA	147952960	147945247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952825
tx.14587	chr4	-	1530	10	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	73.7735942588982	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	NA	False	NA	NA	NA	147952978	147945247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
tx.14588	chr4	-	1932	9	FSM	ENSMUSG00000029022.19	ENSMUST00000156374.9	1909	9	-23	0	1	0	multi-exon	FALSE	canonical	3	219	junction_8	23.8995292840675	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	NA	False	NA	NA	NA	147952979	147945247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
tx.14589	chr4	-	1610	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	190	13	-6	0	multi-exon	FALSE	canonical	3	210	junction_4	26.1538657058192	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	NA	False	NA	NA	NA	147952986	147945247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
tx.1459	chr10	+	1873	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	-58	1	-58	-1	multi-exon	FALSE	canonical	3	74	junction_1	0	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGTCTGTTGAATTTA	NA	False	NA	NA	False	NA	NA	NA	43455106	43460260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_43455319_43458599
tx.14590	chr4	-	4414	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-173	0	-156	0	multi-exon	TRUE	canonical	2	51	junction_4	9.87139526330723	149	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	NA	False	NA	NA	NA	147989317	147958055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
tx.14591	chr4	-	2911	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	25	307	0	-307	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGAGATGCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	148021199	147994516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
tx.14592	chr4	-	2954	17	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	4728	307	4669	-307	3prime_fragment	FALSE	canonical	3	68	junction_3	13.0144150848204	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGAGATGCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	148016496	147994516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083
tx.14593	chr4	+	3891	2	ISM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	-21	0	-21	0	intron_retention	FALSE	canonical	3	503	junction_1	0	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	148025330	148031771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_148026515_148029064
tx.14594	chr4	+	2746	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	-14	-1	-14	1	multi-exon	FALSE	canonical	3	503	junction_1	12.5	998	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGGTCTGTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	148025337	148031772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_148026515_148029064_148029919_148031057
tx.14595	chr4	-	5397	10	ISM	ENSMUSG00000029016.14	ENSMUST00000137724.8	5198	23	22684	0	22425	0	3prime_fragment	FALSE	canonical	3	107	junction_8	7.39369100427294	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	268	False	NA	NA	False	NA	NA	NA	148100594	148088715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957
tx.14596	chr4	-	4990	22	NIC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	25.583795892027	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7446	False	NA	NA	False	NA	NA	NA	148123246	148088715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
tx.14597	chr4	-	5175	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	6	-1875	6	0	multi-exon	FALSE	canonical	3	89	junction_12	12.7042811811837	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7428	False	NA	NA	False	NA	NA	NA	148123264	148088715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
tx.14598	chr4	+	6997	11	NIC	ENSMUSG00000029009.18	novel	2104	6	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	54	junction_1	20.2852162916741	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTTTTTAAATGCTT	NA	False	NA	NA	False	NA	NA	NA	148123589	148144007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
tx.14599	chr4	+	6226	12	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-36	1	intron_retention	FALSE	canonical	3	54	junction_1	21.8151513046846	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTTTTTAAATGCT	NA	False	NA	NA	False	NA	NA	NA	148123579	148144006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
tx.146	chr1	-	5551	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	NA	False	NA	NA	NA	36283383	36182562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
tx.1460	chr10	-	2009	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	8	-36	8	36	multi-exon	FALSE	canonical	3	72	junction_2	11.040380428228	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAACAATGCATTCTGC	NA	False	NA	NA	False	NA	NA	NA	43777733	43750147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
tx.14600	chr4	-	4180	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	45	-8	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_4	478.358913369449	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTATGCATTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	148172443	148161525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172136
tx.14601	chr4	-	1114	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	-16	605	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_4	495.678575288463	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCTTGGTATGATTT	NA	False	NA	NA	False	NA	NA	NA	148172504	148164368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172420
tx.14602	chr4	-	3473	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	12	511	12	-511	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	404	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTACCCTGAGATTTC	NA	False	NA	NA	False	NA	NA	NA	148172476	148162028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
tx.14603	chr4	+	1198	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	334	3	-208	0	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	268	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGATGAACATGTGTA	NA	False	NA	NA	False	NA	NA	NA	148224972	148230153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
tx.14604	chr4	+	1156	8	FSM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	-209	2	-190	-2	multi-exon	FALSE	canonical	3	65	junction_6	213.795439137317	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAGGATGAACATGTG	NA	False	NA	NA	False	NA	NA	NA	148224990	148230151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
tx.14605	chr4	+	1102	7	NIC	ENSMUSG00000029003.12	novel	1535	8	NA	NA	-215	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	247.779079468429	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAGGATGAACATGTG	NA	False	NA	NA	False	NA	NA	NA	148224965	148230151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_148225292_148225371_148225491_148227442_148227515_148228720_148228816_148229110_148229185_148229560_148229654_148229828
tx.14606	chr4	-	1330	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	16	0	11	0	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	NA	False	NA	NA	NA	148236354	148230243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
tx.14607	chr4	-	1184	6	FSM	ENSMUSG00000055401.15	ENSMUST00000134261.2	811	6	-42	-331	-42	0	multi-exon	FALSE	canonical	3	174	junction_5	248.50786707869	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	NA	False	NA	NA	NA	148236424	148230243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236286
tx.14608	chr4	-	1182	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	-18	-1	-18	0	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	NA	False	NA	NA	NA	148236534	148230243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
tx.14609	chr4	-	1163	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	5	72	5	0	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	NA	False	NA	NA	NA	148236587	148230244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
tx.1461	chr10	-	1269	9	ISM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	3	7269	3	-543	5prime_fragment	FALSE	canonical	3	75	junction_6	9.72111104761179	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAATCTTTGCTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	43777738	43757452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
tx.14610	chr4	-	1098	5	FSM	ENSMUSG00000055401.15	ENSMUST00000126615.8	794	5	1	-305	1	0	multi-exon	FALSE	canonical	3	782	junction_1	8.18535277187245	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	NA	False	NA	NA	NA	148234175	148230243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835
tx.14611	chr4	+	1303	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	-22	7	-22	-7	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGACGCACAGATGAAT	NA	False	NA	NA	False	NA	NA	NA	148245055	148250874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
tx.14612	chr4	-	2980	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	12	0	2	0	multi-exon	FALSE	canonical	3	93	junction_1	0	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	148529216	148518951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148521100_148528384
tx.14613	chr4	-	2462	3	NNC	ENSMUSG00000047719.3	novel	576	3	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	31.5	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCAGTGGCTTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	148529214	148518952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_148521100_148528384_148528587_148529101
tx.14614	chr4	+	8588	58	FSM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	-24	0	-24	0	multi-exon	TRUE	canonical	2	74	junction_19	24.6853638803358	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGACTGGCTT	NA	False	NA	NA	False	NA	NA	NA	148533043	148642140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
tx.14615	chr4	+	2780	25	FSM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	5	5	3	3	multi-exon	TRUE	canonical	3	466	junction_4	49.4747234847138	811	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGATGGTTCTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	148642890	148666853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
tx.14616	chr4	+	1322	7	FSM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	1	15	1	-15	multi-exon	FALSE	canonical	3	3072	junction_6	112.657297440808	2174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGACCTCTGACCTTT	8717	False	NA	NA	False	NA	NA	NA	148675960	148679061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
tx.14617	chr4	-	1130	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	407.75718064474	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTCATCACCTGTC	NA	False	NA	NA	False	NA	NA	NA	148711222	148701172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_148701302_148702022_148702093_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
tx.14618	chr4	-	1773	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	-6	137	1	0	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	NA	NA	NA	148711221	148701319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
tx.14619	chr4	-	2167	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGATTCATCACCTGT	NA	False	NA	NA	False	NA	NA	NA	148711222	148701173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
tx.1462	chr10	+	2978	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	4	-1	4	1	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	330	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTTTTTGGTCACTGT	NA	False	NA	NA	False	NA	NA	NA	43777806	43823859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
tx.14620	chr4	-	1185	2	FSM	ENSMUSG00000041459.16	ENSMUST00000147391.3	1011	2	-251	77	62	3	multi-exon	FALSE	canonical	3	409	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	NA	False	NA	NA	NA	148703075	148701169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148701302_148702022
tx.14621	chr4	-	1196	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATGGATTCATCACCT	NA	False	NA	NA	False	NA	NA	NA	148711221	148701175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
tx.14622	chr4	-	2741	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	254	4482	0	-1	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	792	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCTTTGTTTTGCAGC	NA	False	NA	NA	False	NA	NA	NA	148711222	148701320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
tx.14623	chr4	+	4225	11	ISM	ENSMUSG00000028977.18	ENSMUST00000094464.10	4349	16	-34	4618	-34	0	5prime_fragment	FALSE	canonical	1	2	junction_1	4.17612260356422	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTCTGTAAGCTGTAGT	NA	False	NA	NA	False	NA	NA	NA	148888851	149024968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_148888972_148922722_148922878_148974778_148974834_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931
tx.14624	chr4	+	3996	8	NNC	ENSMUSG00000028977.18	novel	3014	6	NA	NA	7251	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.83325938999964	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTGTAAGCTGTAGTG	NA	False	NA	NA	False	NA	NA	NA	148992856	149024969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_148992996_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931
tx.14625	chr4	+	4291	5	ISM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	141413	0	-1160	0	3prime_fragment	FALSE	canonical	2	3	junction_3	1.87082869338697	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACGTTATCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	149030298	149039346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_149030679_149031446_149031619_149032980_149033133_149033249_149033392_149035901
tx.14626	chr4	-	1955	9	FSM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	51	0	3	0	multi-exon	FALSE	canonical	3	391	junction_6	18.1757909043871	366	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGACCTCGTC	NA	False	NA	NA	False	NA	NA	NA	149184282	149044991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
tx.14627	chr4	+	2437	6	FSM	ENSMUSG00000028974.14	ENSMUST00000030816.4	2457	6	23	-3	23	3	multi-exon	FALSE	canonical	3	30	junction_2	2.13541565040626	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCCTTTGTTTGTCAGA	NA	False	NA	NA	False	NA	NA	NA	149188625	149205107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
tx.14628	chr4	-	835	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	47	228	-5	114	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGTGGCTTCAGGTC	NA	False	NA	NA	False	NA	NA	NA	149222039	149212882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
tx.14629	chr4	-	2192	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	24	2	-23	-2	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	394	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	149251140	149234449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
tx.1463	chr10	+	2319	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	38	-5	-19	5	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	268	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGGCTCAAGTGA	NA	False	NA	NA	False	NA	NA	NA	44144391	44240292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
tx.14630	chr4	-	9890	46	NIC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_22	22.5611268434102	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCGTGCTTTAGTCTTT	7196	False	NA	NA	False	NA	NA	NA	149392193	149260775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
tx.14631	chr4	-	5878	11	ISM	ENSMUSG00000063077.16	ENSMUST00000139123.8	3391	13	5772	-2542	5772	-2	3prime_fragment	FALSE	canonical	3	52	junction_6	8.93532316147547	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCGTGCTTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	149277179	149260777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029
tx.14632	chr4	-	10135	47	FSM	ENSMUSG00000063077.16	ENSMUST00000055647.15	5992	47	-227	-3916	-40	-1	multi-exon	FALSE	canonical	2	6	junction_23	26.5390624108764	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCGTGCTTTAGTCTT	7199	False	NA	NA	False	NA	NA	NA	149392190	149260776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149304998_149305248_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
tx.14633	chr4	-	7101	21	FSM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	-110	0	-40	0	multi-exon	FALSE	canonical	3	40	junction_1	18.6480561989715	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCATGATCTTTAAG	7199	False	NA	NA	False	NA	NA	NA	149392190	149318190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
tx.14634	chr4	-	5493	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	130	3	12	-3	multi-exon	TRUE	canonical	3	203	junction_22	27.7325828917206	587	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTCCTGTGAGTCGTC	NA	False	NA	NA	False	NA	NA	NA	149511076	149412875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
tx.14635	chr4	-	2644	4	FSM	ENSMUSG00000028992.14	ENSMUST00000119921.8	2657	4	13	0	9	0	multi-exon	FALSE	canonical	3	41	junction_1	4.98887651569859	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGGACGACTACCCTCT	1661	False	NA	NA	False	NA	NA	NA	149569646	149552028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149554240_149557741_149557926_149558884_149559053_149569565
tx.14636	chr4	-	2221	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	5	-988	5	1	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACGACTACCCTCTG	1657	False	NA	NA	False	NA	NA	NA	149569650	149552027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
tx.14637	chr4	+	167	2	Antisense	novelGene_ENSMUSG00000028992.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAGAAAA	2538	False	NA	NA	False	NA	NA	NA	149555729	149556562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_149555873_149556538
tx.14638	chr4	+	1295	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	149569688	149581125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
tx.14639	chr4	+	1837	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	149569730	149581125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
tx.1464	chr10	-	5295	7	FSM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	-151	-1119	-90	3	multi-exon	FALSE	canonical	3	20	junction_6	13.6218778278017	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGCTTGTCTAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	44334834	44313169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
tx.14640	chr4	+	2749	5	NNC	ENSMUSG00000028988.14	novel	2674	5	NA	NA	-113	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	83.2676407735922	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGAGCTGAGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	149602579	149650895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_149602837_149624285_149624371_149630167_149630250_149630858_149630950_149648661
tx.14641	chr4	+	2773	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	-100	1	-100	-1	multi-exon	FALSE	canonical	3	188	junction_2	7.98044484975618	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGAGCTGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	149602592	149650893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
tx.14642	chr4	+	4504	19	FSM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	-185	-1000	-15	0	multi-exon	FALSE	canonical	3	19	junction_2	165.993641109799	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	NA	False	NA	NA	NA	149670909	149733356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
tx.14643	chr4	+	4409	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	127.641037190239	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	NA	False	NA	NA	NA	149670917	149733356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
tx.14644	chr4	+	4468	18	FSM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	-9	0	-9	0	multi-exon	FALSE	canonical	3	455	junction_9	51.7981175594149	728	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	NA	False	NA	NA	NA	149670915	149733356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
tx.14645	chr4	+	3154	7	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	15837	-1	intron_retention	FALSE	canonical	3	508	junction_6	54.4630353746669	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	NA	False	NA	NA	NA	149727423	149733355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
tx.14646	chr4	-	4938	24	NIC	ENSMUSG00000039936.19	novel	4905	24	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_23	5.23547590382274	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTTGGCTCAAATAACAA	NA	False	NA	NA	False	NA	NA	NA	149760548	149733624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149760368
tx.14647	chr4	-	4891	24	NIC	ENSMUSG00000039936.19	novel	4905	24	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_23	5.81211823146122	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTTGGCTCAAATAACAA	NA	False	NA	NA	False	NA	NA	NA	149783144	149733624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149783011
tx.14648	chr4	-	3694	11	FSM	ENSMUSG00000044700.16	ENSMUST00000105687.9	3697	11	1	2	1	-2	multi-exon	FALSE	canonical	3	194	junction_3	67.7469556511582	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGGCTGTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	149822500	149799833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
tx.14649	chr4	-	3635	11	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	103.549022206876	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGGCTGTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	149822495	149799833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_149801535_149802476_149802615_149803107_149803348_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
tx.1465	chr10	-	3256	2	NIC	ENSMUSG00000038151.14	novel	4025	7	NA	NA	15965	3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGCTTGTCTAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	44317241	44313169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_44316239_44317054
tx.14650	chr4	-	4653	10	FSM	ENSMUSG00000044700.16	ENSMUST00000054459.11	4631	10	-16	-6	-16	-2	multi-exon	FALSE	canonical	3	194	junction_2	68.5966921421107	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGGCTGTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	149822517	149799833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
tx.14651	chr4	-	3625	6	FSM	ENSMUSG00000044700.16	ENSMUST00000103208.2	3620	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	307	junction_5	21.9508541975022	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCGTCTTTTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	149822506	149809320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
tx.14652	chr4	-	1443	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	8	436	8	-436	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	266	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCGTGCTGGGCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	149858726	149828928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
tx.14653	chr4	-	3083	3	FSM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	6	3	-6	-3	multi-exon	FALSE	canonical	3	59	junction_1	6.5	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATCCGAGTCCTTTCG	NA	False	NA	NA	False	NA	NA	NA	150039494	149980742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_149982799_149990872_149991715_150039309
tx.14654	chr4	-	4762	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	-21	4	-21	-4	multi-exon	FALSE	canonical	3	55	junction_3	7.96868872525461	144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACATTGAGTTGATAAAC	NA	False	NA	NA	False	NA	NA	NA	150093501	150063935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
tx.14655	chr4	+	4105	4	FSM	ENSMUSG00000047875.7	ENSMUST00000094451.4	4900	4	255	540	255	-540	multi-exon	FALSE	canonical	2	6	junction_2	1.88561808316413	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATCAGGGTTCTC	NA	False	NA	NA	False	NA	NA	NA	150172076	150189844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_150172594_150183214_150183429_150186036_150186235_150186668
tx.14656	chr4	+	2818	13	NIC	ENSMUSG00000028976.11	novel	3158	14	NA	NA	35	-409	intron_retention	FALSE	canonical	1	2	junction_6	1.53432938662683	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAGCAGTTCTCTACGA	5660	False	NA	NA	False	NA	NA	NA	150203774	150228217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_150204506_150205140_150205223_150210046_150210146_150210582_150210744_150213499_150213625_150220000_150220154_150223877_150224004_150224087_150224276_150224386_150224498_150225215_150225318_150226634_150226711_150227256_150227385_150227481
tx.14657	chr4	+	1764	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	256	7	-32	-1	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	971	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	NA	False	NA	NA	NA	150321664	150333329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
tx.14658	chr4	+	7827	23	FSM	ENSMUSG00000039852.18	ENSMUST00000105682.9	7728	23	-100	1	-100	-1	multi-exon	FALSE	canonical	3	64	junction_3	25.3224249749421	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGTTGGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	150366002	150706422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
tx.14659	chr4	+	7671	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-72	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_3	25.5941638755752	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	150366030	150706420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
tx.1466	chr10	-	3394	3	ISM	ENSMUSG00000038151.14	ENSMUST00000039174.11	5281	8	17493	-2	15955	2	3prime_fragment	FALSE	canonical	3	47	junction_2	4	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAATGCTTGTCTAGTGTC	NA	False	NA	NA	False	NA	NA	NA	44317251	44313170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_44316239_44316654_44316784_44317054
tx.14660	chr4	+	7833	23	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-105	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_19	29.5377962102571	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	150365997	150706420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
tx.14661	chr4	+	8761	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-58	1	intron_retention	FALSE	canonical	3	64	junction_3	25.8006486233923	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	150366044	150706420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
tx.14662	chr4	+	6117	13	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-68	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	28.7347785792757	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGTTGGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	150653976	150706422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
tx.14663	chr4	+	6076	13	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	37.0730322771448	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	150654018	150706420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
tx.14664	chr4	+	4996	6	ISM	ENSMUSG00000039852.18	ENSMUST00000105680.9	6503	17	126226	-4	-796	0	3prime_fragment	FALSE	canonical	3	105	junction_2	23.1982757979984	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	NA	False	NA	NA	NA	150699075	150706423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
tx.14665	chr4	+	3324	4	ISM	ENSMUSG00000039852.18	ENSMUST00000105680.9	6503	17	128599	-1	-274	1	3prime_fragment	FALSE	canonical	3	133	junction_2	13.4742552876052	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	150701448	150706420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_150701937_150702862_150703010_150703481_150703663_150703912
tx.14666	chr4	+	3042	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	1	0	1	0	multi-exon	FALSE	canonical	3	303	junction_2	19.3275853524323	320	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTGTCTTGTCTAAA	3782	False	NA	NA	False	NA	NA	NA	150939530	150953344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
tx.14667	chr4	-	844	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	63	1	5	-1	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	1609	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	NA	False	NA	NA	NA	150994320	150981590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
tx.14668	chr4	-	2127	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	-11	4	-1	-4	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	234	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCGTGTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	151142421	151131760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
tx.14669	chr4	-	5205	12	FSM	ENSMUSG00000014592.22	ENSMUST00000105670.8	4961	12	45	-289	45	0	multi-exon	FALSE	canonical	2	11	junction_7	4.69217741838689	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATCTGTGTTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	151192988	151143981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
tx.1467	chr10	+	2763	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-31	8201	-31	-8201	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	1283	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTAGTTTTGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	44943267	45035093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
tx.14670	chr4	-	3073	6	ISM	ENSMUSG00000014592.22	ENSMUST00000049790.14	8423	24	275262	83543	275166	-56945	internal_fragment	FALSE	canonical	1	4	junction_3	4.12795348811006	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATCCCCTGAGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	151670941	151227525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_151230026_151232866_151233008_151248272_151248427_151374488_151374561_151537740_151537877_151670871
tx.14671	chr4	-	2799	3	ISM	ENSMUSG00000014592.22	ENSMUST00000049790.14	8423	24	697775	83541	-24387	-56943	internal_fragment	FALSE	canonical	3	9	junction_1	3	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCCCTGAGTGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	151248428	151227523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_151230026_151232866_151233008_151248272
tx.14672	chr4	-	2347	6	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	485.492492217954	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCACTAGTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	151946202	151864904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_151866589_151874741_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
tx.14673	chr4	-	600	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-42	1640	0	16	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTAAGTTTAATGAGT	NA	False	NA	NA	False	NA	NA	NA	151946203	151876670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
tx.14674	chr4	-	312	3	ISM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-42	39843	0	-38187	5prime_fragment	FALSE	canonical	3	969	junction_1	16.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATACATTTCAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	151946203	151914873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_151914994_151920270_151920341_151946081
tx.14675	chr4	+	2932	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	35	184	-5	-184	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	945	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCACTTCTGTCCATCT	9105	False	NA	NA	False	NA	NA	NA	152018182	152066410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
tx.14676	chr4	-	1006	3	FSM	ENSMUSG00000039759.11	ENSMUST00000105665.3	832	3	-10	-164	0	1	multi-exon	FALSE	canonical	3	60	junction_1	59.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTGTCACTCGGTTA	NA	False	NA	NA	False	NA	NA	NA	152073437	152067094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_152067810_152070125_152070319_152073339
tx.14677	chr4	-	1107	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	17	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	10.8730042868667	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCTGTCACTCGGTT	NA	False	NA	NA	False	NA	NA	NA	152073437	152067095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
tx.14678	chr4	-	3167	4	FSM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	40	-2	40	2	multi-exon	FALSE	canonical	3	138	junction_1	6.59966329107444	363	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGCCTCCTTAGGTG	NA	False	NA	NA	False	NA	NA	NA	152080675	152074087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_152076237_152076526_152077050_152078446_152078549_152080282
tx.14679	chr4	+	3881	4	FSM	ENSMUSG00000073700.4	ENSMUST00000097773.4	3986	4	105	0	105	0	multi-exon	FALSE	canonical	3	100	junction_1	3.39934634239519	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTCATGGCCTTC	6503	False	NA	NA	False	NA	NA	NA	152093364	152102137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791
tx.1468	chr10	+	1605	5	NNC	ENSMUSG00000019848.15	novel	1853	4	NA	NA	-16	-8	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	10.280442597476	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCAATTTGAAGATGAC	NA	False	NA	NA	False	NA	NA	NA	45165481	45194540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_45165672_45190656_45191005_45191163_45191376_45192526_45192636_45193794
tx.14680	chr4	-	2696	10	ISM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	6	-1	6	1	intron_retention	FALSE	canonical	3	32	junction_7	9.32142096940638	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTGTCTGTTCCTTGGT	8685	False	NA	NA	False	NA	NA	NA	152112112	152104229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844
tx.14681	chr4	-	2224	11	FSM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	-8	2	2	0	multi-exon	FALSE	canonical	3	24	junction_10	11.2782977438973	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCAGTGTCTGTTCCTT	8671	False	NA	NA	False	NA	NA	NA	152112126	152104232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
tx.14682	chr4	+	3647	11	FSM	ENSMUSG00000028948.17	ENSMUST00000131696.3	3616	11	-35	4	1	-4	multi-exon	FALSE	canonical	3	23	junction_4	202.328841246126	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGATTGTGAATACAGCT	7346	False	NA	NA	False	NA	NA	NA	152123784	152144495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
tx.14683	chr4	+	3723	12	FSM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	11	-12	2	-6	multi-exon	FALSE	canonical	3	617	junction_5	39.8725241465621	1181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGATTGTGAATACAG	7356	False	NA	NA	False	NA	NA	NA	152123794	152144493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
tx.14684	chr4	+	3914	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	104	junction_1	15.3631865184277	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCATGCGCTTCTGGAAC	NA	False	NA	NA	False	NA	NA	NA	152171298	152199855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
tx.14685	chr4	+	4095	21	ISM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-12	-4	-12	0	intron_retention	FALSE	canonical	3	104	junction_1	15.0860863049367	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTCATGCGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	152171302	152199851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
tx.14686	chr4	+	3832	22	FSM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-12	-2	-12	2	multi-exon	FALSE	canonical	3	104	junction_1	15.0256017344728	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGAGTCATGCGCTTC	NA	False	NA	NA	False	NA	NA	NA	152171302	152199849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
tx.14687	chr4	+	1386	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	67	4	67	1	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	248	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGAAGCCTAGGTGGTC	NA	False	NA	NA	False	NA	NA	NA	152262657	152356305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
tx.14688	chr4	+	4865	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	56	-2	-21	2	multi-exon	FALSE	canonical	3	97	junction_2	16.0370664399696	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTCCTGTATCAGGT	4591	False	NA	NA	False	NA	NA	NA	152381739	152391580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
tx.14689	chr4	+	4973	6	FSM	ENSMUSG00000039662.17	ENSMUST00000151372.8	4950	6	-21	-2	-21	1	multi-exon	FALSE	canonical	3	25	junction_2	50.2274825170444	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTCCTGTATCAGG	4591	False	NA	NA	False	NA	NA	NA	152381739	152391579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152382026_152383141_152383231_152383593_152383703_152384127_152384298_152384993_152385212_152387478
tx.1469	chr10	+	1853	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	81	-81	-16	81	multi-exon	FALSE	canonical	3	31	junction_1	0.942809041582063	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGTGCATAATAATTAC	NA	False	NA	NA	False	NA	NA	NA	45165481	45194629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
tx.14690	chr4	+	467	4	FSM	ENSMUSG00000028936.16	ENSMUST00000103191.11	474	4	7	0	7	0	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	796	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	152410316	152416937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
tx.14691	chr4	+	2011	3	ISM	ENSMUSG00000028936.16	ENSMUST00000188151.2	2048	4	1611	11	0	-11	3prime_fragment	FALSE	canonical	3	5596	junction_2	103	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACATGGCTACTGTCACT	NA	False	NA	NA	False	NA	NA	NA	152411936	152418516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_152412043_152414460_152414586_152416736
tx.14692	chr4	+	326	2	ISM	ENSMUSG00000028936.16	ENSMUST00000150485.2	576	4	2524	-7	2447	0	3prime_fragment	FALSE	canonical	3	5596	junction_1	0	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	152414460	152416937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_152414586_152416736
tx.14693	chr4	-	3544	15	FSM	ENSMUSG00000028931.13	ENSMUST00000030768.10	3597	15	54	-1	9	0	multi-exon	TRUE	canonical	1	4	junction_13	3.43748840443313	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTGATCTCTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	152561992	152475200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152520261_152520395_152561857
tx.14694	chr4	+	4966	30	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-422	1	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_6	8.66361725675035	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCTTCTGATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	152562176	152647641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583581_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
tx.14695	chr4	+	4927	30	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-420	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_14	7.38929392329869	41	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCTTCTGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	152562178	152647640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
tx.14696	chr4	-	1758	2	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTGGTTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	153174330	153169840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_153171301_153174032
tx.14697	chr4	+	3519	3	NIC	ENSMUSG00000047613.11	novel	1098	4	NA	NA	1	3	intron_retention	FALSE	canonical	3	801	junction_2	23	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACTGTGTTCACAAAA	NA	False	NA	NA	False	NA	NA	NA	154041694	154046378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_154044320_154044987_154045450_154045946
tx.14698	chr4	+	1077	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	18	3	0	-3	multi-exon	FALSE	canonical	3	743	junction_1	42.5519290592879	343	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTGTGTTCACAAAAG	NA	False	NA	NA	False	NA	NA	NA	154041711	154046379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
tx.14699	chr4	-	2037	7	FSM	ENSMUSG00000029027.10	ENSMUST00000030893.3	2093	7	56	0	11	0	multi-exon	FALSE	canonical	3	25	junction_6	5.79271573232759	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTCAAAATTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	154059527	154048905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154057236_154057426_154059025_154059153_154059323
tx.1470	chr10	+	4425	8	FSM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	-57	0	-57	0	multi-exon	FALSE	canonical	2	3	junction_7	2.44114392723358	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTGTATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	45211810	45248575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_45211978_45215315_45215553_45219129_45219255_45222222_45222411_45223880_45223990_45229845_45230014_45230846_45230989_45245286
tx.14700	chr4	+	5166	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-20	5	-20	-5	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTCATGTCACTTT	NA	False	NA	NA	False	NA	NA	NA	154059630	154093184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
tx.14701	chr4	+	3365	8	NNC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_7	131.481511077041	459	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	NA	False	NA	NA	NA	154096243	154105969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
tx.14702	chr4	+	3411	7	FSM	ENSMUSG00000029028.15	ENSMUST00000030894.15	3395	7	-16	0	-16	0	multi-exon	FALSE	canonical	3	350	junction_6	37.5972812255827	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	NA	False	NA	NA	NA	154096243	154105969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087
tx.14703	chr4	-	4712	12	NNC	ENSMUSG00000029026.18	novel	4752	12	NA	NA	3212	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	4.45918126124753	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTGACTATTGTAACTA	NA	False	NA	NA	False	NA	NA	NA	154166567	154140710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154166326
tx.14704	chr4	+	1591	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	8	-1	8	1	multi-exon	FALSE	canonical	3	51	junction_4	6.78354840224641	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACAGTGGTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	154226836	154241274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
tx.14705	chr4	-	1789	4	NIC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	-24	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	329.056226198502	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGAGTTGCTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	154245147	154241944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_154243023_154243725_154243880_154244497_154244719_154244811
tx.14706	chr4	-	1748	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	519	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	154245147	154241941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
tx.14707	chr4	-	3099	2	FSM	ENSMUSG00000029030.15	ENSMUST00000133165.2	947	2	-70	-2082	-10	0	multi-exon	FALSE	canonical	3	746	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	154245133	154241941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_154244719_154244811
tx.14708	chr4	-	3771	14	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-4	28	intron_retention	FALSE	canonical	3	21	junction_13	5.15097509008714	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCCTTAGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	154384515	154362914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154372471_154375392_154376011_154384281
tx.14709	chr4	-	2885	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	-25	0	-25	0	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACAGGTAGGTGGAGAC	NA	False	NA	NA	False	NA	NA	NA	154384536	154362942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
tx.1471	chr10	-	5451	5	FSM	ENSMUSG00000063804.9	ENSMUST00000079390.7	5402	5	-54	5	-54	-5	multi-exon	FALSE	canonical	3	19	junction_4	19.8368344248774	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGATATTTTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	45346351	45252720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45346146
tx.14710	chr4	-	2964	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-24	-31	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCCACCTGTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	154384535	154362973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
tx.14711	chr4	-	2595	14	ISM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	8503	33	-4466	-33	3prime_fragment	FALSE	canonical	3	21	junction_12	5.15097509008714	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGAGCCACCTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	154376008	154362975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392
tx.14712	chr4	+	2369	2	FSM	ENSMUSG00000084987.2	ENSMUST00000144347.2	387	2	-5	-1977	-5	1977	multi-exon	FALSE	canonical	2	6	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTGTCTCATGTGT	2921	False	NA	NA	False	NA	NA	NA	154685648	154690636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_154685865_154688483
tx.14713	chr4	-	3772	2	FSM	ENSMUSG00000086810.2	ENSMUST00000138077.2	3414	2	-341	-17	-341	17	multi-exon	FALSE	canonical	3	15	junction_1	0	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAATAGTGATTTGTAA	NA	False	NA	NA	False	NA	NA	NA	154740116	154730193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_154733095_154739245
tx.14714	chr4	-	858	7	FSM	ENSMUSG00000029059.10	ENSMUST00000030935.10	883	7	25	0	25	0	multi-exon	FALSE	canonical	3	64	junction_6	8.17856276425687	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCGTCCTTCCCACAGCA	NA	False	NA	NA	False	NA	NA	NA	154983542	154980855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_154981055_154981496_154981616_154981805_154981882_154981962_154982027_154982584_154982637_154982932_154983138_154983399
tx.14715	chr4	+	2568	19	FSM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	6	-66	-4	-1	multi-exon	FALSE	canonical	3	88	junction_8	27.1993100856585	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048585	155065394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
tx.14716	chr4	+	2539	19	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	31.6079377434698	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048580	155065394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
tx.14717	chr4	+	1587	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	23	78	-15	-78	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAATGAAGGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	155151495	155156812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
tx.14718	chr4	-	1311	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	25	260	23	-260	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	437	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACACTTTCCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	155170805	155158826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
tx.14719	chr4	-	1426	8	NIC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	33	-263	combination_of_known_junctions	FALSE	canonical	3	91	junction_7	617.350990035619	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGACACTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	155170795	155158829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167694_155170661
tx.1472	chr10	-	5514	6	NIC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-56	-11	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	6.46838465151849	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTTGGAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	45362547	45252726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
tx.14720	chr4	-	1517	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	18	268	18	-268	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTATTTTGACACTTT	NA	False	NA	NA	False	NA	NA	NA	155170810	155158834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
tx.14721	chr4	-	4393	7	ISM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	33	264	33	-264	intron_retention	FALSE	canonical	3	376	junction_6	458.230897643923	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTTGACACTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	155170795	155158830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565
tx.14722	chr4	-	4743	6	ISM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	33	268	33	-268	intron_retention	FALSE	canonical	3	1459	junction_1	116.481758228488	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTATTTTGACACTTT	NA	False	NA	NA	False	NA	NA	NA	155170795	155158834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123
tx.14723	chr4	-	1483	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	33	-264	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_6	652.166655801088	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTTGACACTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	155170795	155158830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155167775_155170661
tx.14724	chr4	+	1718	14	FSM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	-64	5	-64	-5	multi-exon	TRUE	canonical	3	16	junction_9	6.41927570616156	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTAGCACCTTTT	NA	False	NA	NA	False	NA	NA	NA	155170969	155229957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
tx.14725	chr4	-	5894	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	-485	113	-485	-113	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTTGGCATATTTAT	NA	False	NA	NA	False	NA	NA	NA	155307534	155238644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
tx.14726	chr4	+	1050	4	FSM	ENSMUSG00000073684.14	ENSMUST00000178473.8	1076	4	23	3	0	0	multi-exon	FALSE	canonical	3	113	junction_1	46.5784881201135	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	NA	False	NA	NA	NA	155334445	155341141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155334520_155334962_155335108_155335212_155335494_155340591
tx.14727	chr4	+	1401	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	78	0	78	0	multi-exon	FALSE	canonical	3	207	junction_2	4.5	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	NA	False	NA	NA	NA	155334537	155341141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155335108_155335212_155335494_155340591
tx.14728	chr4	-	4192	17	NIC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-42	7	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	50.979009160634	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCCTGTTATTATTT	NA	False	NA	NA	False	NA	NA	NA	155445860	155344578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155441937_155442060_155445608
tx.14729	chr4	-	2335	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-42	348	-42	31	multi-exon	FALSE	canonical	3	142	junction_14	28.8196876191202	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTCTGATGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	155445860	155346525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
tx.1473	chr10	+	3692	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	18	75	18	-1	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTCTTTATTTGATCT	1796	False	NA	NA	False	NA	NA	NA	45453942	45588366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
tx.14730	chr4	+	2376	5	FSM	ENSMUSG00000078490.11	ENSMUST00000123952.9	2365	5	-12	1	-12	-1	multi-exon	FALSE	canonical	2	6	junction_2	1.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTTGCG	2320	False	NA	NA	False	NA	NA	NA	155493702	155506448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155494028_155500136_155500223_155503076_155503153_155503303_155503448_155504703
tx.14731	chr4	+	951	5	FSM	ENSMUSG00000023153.10	ENSMUST00000023920.3	932	5	-19	0	-2	0	multi-exon	FALSE	canonical	1	2	junction_1	0.82915619758885	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGTCTTTGCGGAAAGG	142	False	NA	NA	False	NA	NA	NA	155553568	155555314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155553668_155553759_155553804_155553918_155553961_155554445_155554625_155554727
tx.14732	chr4	+	3090	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	-4	2	-1	0	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	2480	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGTGTGATGGTTAT	NA	False	NA	NA	False	NA	NA	NA	155575816	155643724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
tx.14733	chr4	+	3139	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	-10	2	-1	0	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	2210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGTGTGATGGTTAT	NA	False	NA	NA	False	NA	NA	NA	155575816	155643724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
tx.14734	chr4	+	2824	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	208.120662116956	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9691	False	NA	NA	False	NA	NA	NA	155648275	155675454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
tx.14735	chr4	+	3029	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	119	4	-7	0	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	1101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9691	False	NA	NA	False	NA	NA	NA	155648275	155675454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
tx.14736	chr4	+	3545	9	FSM	ENSMUSG00000042202.16	ENSMUST00000118607.2	2166	9	-280	-1099	53	328	multi-exon	FALSE	canonical	2	8	junction_6	4.43705983732471	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTAAAGCTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	155686120	155704875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155686620_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968
tx.14737	chr4	-	2357	2	Genic_Genomic	ENSMUSG00000086682.2	novel	2490	3	NA	NA	-16	-6240	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155709228	155706717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr4_-_155706869_155707022
tx.14738	chr4	+	2597	20	FSM	ENSMUSG00000029062.15	ENSMUST00000067081.10	2595	20	-5	3	-5	-3	multi-exon	TRUE	canonical	3	247	junction_2	74.7943440763884	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3957	False	NA	NA	False	NA	NA	NA	155709320	155734392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
tx.14739	chr4	+	2736	21	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	-3	-6	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	136.859882726824	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3970	False	NA	NA	False	NA	NA	NA	155709333	155734389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_155709399_155709641_155709797_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
tx.1474	chr10	+	3598	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	29.462821508465	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	1808	False	NA	NA	False	NA	NA	NA	45453954	45588367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
tx.14740	chr4	-	3637	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	5	0	0	0	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7425	False	NA	NA	False	NA	NA	NA	155753650	155739138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
tx.14741	chr4	-	3713	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	118	junction_11	58.8548740018329	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7424	False	NA	NA	False	NA	NA	NA	155753651	155739138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
tx.14742	chr4	-	3748	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	72	junction_13	70.1036035839604	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7422	False	NA	NA	False	NA	NA	NA	155753653	155739138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
tx.14743	chr4	-	3549	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_19	79.1919019895357	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7429	False	NA	NA	False	NA	NA	NA	155753646	155739138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
tx.14744	chr4	-	3867	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	173	junction_12	47.9601171756927	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7424	False	NA	NA	False	NA	NA	NA	155753651	155739138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
tx.14745	chr4	+	1693	2	Genic_Genomic	ENSMUSG00000074738.3	novel	2140	1	NA	NA	1	4	multi-exon	FALSE	canonical	2	10	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTTGTGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	155778799	155780942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr4_+_155780366_155780815
tx.14746	chr4	+	1075	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	302	95	-22	-95	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	526	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAAGTGTCTGTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	155789558	155818241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
tx.14747	chr4	+	2006	2	FSM	ENSMUSG00000029038.10	ENSMUST00000140322.2	1555	2	9	-460	-2	460	multi-exon	FALSE	canonical	3	1675	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCGGCCATTGAGTCAT	NA	False	NA	NA	False	NA	NA	NA	155789589	155801595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155789919_155799918
tx.14748	chr4	-	2410	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	1	2	1	-2	multi-exon	FALSE	canonical	3	684	junction_5	53.203759265676	895	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	NA	False	NA	NA	NA	155845549	155825099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
tx.14749	chr4	+	668	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	94	2	-32	-2	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	259	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGAGTTATTTCCTG	NA	False	NA	NA	False	NA	NA	NA	155888071	155893286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
tx.1475	chr10	+	8332	4	ISM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	4	225950	4	6599	5prime_fragment	FALSE	canonical	3	92	junction_3	4.71404520791032	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTCAAAGTTTATCAA	NA	False	NA	NA	False	NA	NA	NA	50468768	50501631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807
tx.14750	chr4	+	2175	6	ISM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	1	4509	1	-1838	5prime_fragment	FALSE	canonical	3	604	junction_5	178.167786089405	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAGCATTTTCTTTCTA	4638	False	NA	NA	False	NA	NA	NA	155896958	155904491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995
tx.14751	chr4	+	791	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	306	62	-2	7	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	350	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGACCTAGAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	155916113	155917525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
tx.14752	chr4	+	815	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	-5	-37	-1	7	multi-exon	FALSE	canonical	3	281	junction_1	1010.64072086309	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGACCTAGAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	155916120	155917525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
tx.14753	chr4	+	2180	9	NNC	ENSMUSG00000029070.10	novel	2203	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.507497751349	3	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTCTTGGACCTGCT	NA	False	NA	NA	False	NA	NA	NA	155924188	155928545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_155924352_155925362_155925666_155925901_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
tx.14754	chr4	+	1757	7	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1682	-6	-896	6	3prime_fragment	FALSE	canonical	3	23	junction_2	4.10960933531265	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGACCTGCTGCTCTC	NA	False	NA	NA	False	NA	NA	NA	155925864	155928551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
tx.14755	chr4	+	3516	13	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	113	junction_6	17.1334630345285	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	155931856	155943760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
tx.14756	chr4	+	3429	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	113	junction_7	17.0970082853022	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATGTGTGGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	155931856	155943758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
tx.14757	chr4	+	3334	15	FSM	ENSMUSG00000029071.17	ENSMUST00000030948.16	3358	15	23	1	23	0	multi-exon	FALSE	canonical	3	98	junction_6	19.2953679542474	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	155931881	155943759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
tx.14758	chr4	+	3418	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	25	0	intron_retention	FALSE	canonical	3	98	junction_6	19.6592270219506	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	155931883	155943760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
tx.14759	chr4	-	2132	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	-8	538	-8	35	multi-exon	FALSE	canonical	3	76	junction_1	2.5	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTCACAGGTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	155953905	155949717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_155951343_155951569_155951795_155953623
tx.1476	chr10	+	7457	42	FSM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	20	283	20	-283	multi-exon	FALSE	canonical	3	60	junction_25	18.281297269701	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTACTCTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	50468784	50727298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
tx.14760	chr4	+	2114	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	20	234	-1	136	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	775	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9980	False	NA	NA	False	NA	NA	NA	155954022	155973326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
tx.14761	chr4	-	1982	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	293	junction_5	37.4985184892535	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9116	False	NA	NA	False	NA	NA	NA	155976202	155973318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
tx.14762	chr4	-	1221	8	FSM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	27	-5	1	5	multi-exon	FALSE	canonical	3	268	junction_3	43.9103911276089	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTTTATTACTTTAGC	9107	False	NA	NA	False	NA	NA	NA	155976211	155973313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
tx.14763	chr4	-	2319	5	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	8	-2	intron_retention	FALSE	canonical	3	293	junction_3	44.5954033505697	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGGTCTGTTTATTA	9114	False	NA	NA	False	NA	NA	NA	155976204	155973320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
tx.14764	chr4	+	3943	23	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-25	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	17.9093216413379	114	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	NA	False	NA	NA	NA	155976703	155991707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
tx.14765	chr4	+	1304	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	5	0	5	0	multi-exon	FALSE	canonical	3	344	junction_1	275.8918870379	223	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	762	False	NA	NA	False	NA	NA	NA	156028292	156042168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
tx.14766	chr4	+	1465	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	-31	0	7	0	multi-exon	FALSE	canonical	3	230	junction_1	334.708584793838	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	764	False	NA	NA	False	NA	NA	NA	156028294	156042168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
tx.14767	chr4	+	1598	8	FSM	ENSMUSG00000023286.17	ENSMUST00000024056.10	3483	8	-8	1893	-8	0	multi-exon	FALSE	canonical	3	207	junction_1	340.827324764495	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	768	False	NA	NA	False	NA	NA	NA	156028298	156042168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
tx.14768	chr4	+	1435	7	FSM	ENSMUSG00000023286.17	ENSMUST00000166489.8	3339	7	11	1893	-8	0	multi-exon	FALSE	canonical	3	339	junction_1	277.674519696873	231	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	768	False	NA	NA	False	NA	NA	NA	156028298	156042168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
tx.14769	chr4	+	1305	8	FSM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	7	3	7	-3	multi-exon	FALSE	canonical	3	21	junction_4	2.37332110369088	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGTGCACTCTGCT	NA	False	NA	NA	False	NA	NA	NA	156046781	156051083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
tx.1477	chr10	+	5582	30	NNC	ENSMUSG00000038774.10	novel	529	3	NA	NA	30019	-281	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	25.7895996144931	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTACTCTTTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	50555169	50727300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_50555698_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
tx.14770	chr4	+	1718	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	57	3402	57	-2	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	510	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	NA	False	NA	NA	NA	156077424	156094665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
tx.14771	chr4	+	4743	6	ISM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	3283	5	2817	-5	3prime_fragment	FALSE	canonical	3	674	junction_2	38.055748580208	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGCCTGTGTGCACGT	NA	False	NA	NA	False	NA	NA	NA	156080650	156098062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
tx.14772	chr4	+	2941	8	FSM	ENSMUSG00000059939.14	ENSMUST00000125786.8	2937	8	-5	1	-2	1	multi-exon	FALSE	canonical	3	88	junction_1	44.3313129302804	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8253	False	NA	NA	False	NA	NA	NA	156194436	156211721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
tx.14773	chr4	+	2427	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	67.7595703572565	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8259	False	NA	NA	False	NA	NA	NA	156194442	156211721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.14774	chr4	+	2617	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	69	junction_5	54.3310166939659	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8256	False	NA	NA	False	NA	NA	NA	156194439	156211722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
tx.14775	chr4	+	5632	7	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	88	junction_1	43.7483333015861	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8256	False	NA	NA	False	NA	NA	NA	156194439	156211722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
tx.14776	chr4	+	5547	8	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-5	1	intron_retention	FALSE	canonical	3	88	junction_1	50.3550658132945	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8250	False	NA	NA	False	NA	NA	NA	156194433	156211721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.14777	chr4	+	2527	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	0	1	0	1	multi-exon	FALSE	canonical	3	69	junction_5	55.1321644374276	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8255	False	NA	NA	False	NA	NA	NA	156194438	156211721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.14778	chr4	+	2852	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	88	junction_1	48.8618908250592	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8253	False	NA	NA	False	NA	NA	NA	156194436	156211722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.14779	chr4	+	2727	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	69	junction_5	54.8475158963467	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGAGGTCATGATG	8294	False	NA	NA	False	NA	NA	NA	156194477	156211720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
tx.1478	chr10	+	2913	10	NIC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	58.3357671449949	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGACTTCTATTTGGC	NA	False	NA	NA	False	NA	NA	NA	52109693	52197474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
tx.14780	chr4	+	2637	10	FSM	ENSMUSG00000059939.14	ENSMUST00000169550.8	2660	10	24	-1	3	1	multi-exon	FALSE	canonical	3	69	junction_5	55.5417760689095	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8295	False	NA	NA	False	NA	NA	NA	156194478	156211721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.14781	chr4	+	4563	4	ISM	ENSMUSG00000059939.14	ENSMUST00000125786.8	2937	8	9999	1	6088	1	3prime_fragment	FALSE	canonical	3	183	junction_1	11.8415464455544	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	1139	False	NA	NA	False	NA	NA	NA	156204440	156211721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_156206874_156207991_156208127_156208432_156208580_156209873
tx.14782	chr4	-	1975	3	ISM	ENSMUSG00000041936.19	ENSMUST00000154494.8	2071	5	1298	0	1298	0	3prime_fragment	FALSE	canonical	3	470	junction_1	22	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	3414	False	NA	NA	False	NA	NA	NA	156252245	156249746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_156251111_156251367_156251472_156251738
tx.14783	chr4	-	2983	12	ISM	ENSMUSG00000041936.19	ENSMUST00000105574.9	7193	35	14347	0	2176	0	3prime_fragment	FALSE	canonical	3	284	junction_11	61.9022156107571	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	NA	False	NA	NA	NA	156256011	156249746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858
tx.14784	chr4	-	7393	36	FSM	ENSMUSG00000041936.19	ENSMUST00000180572.2	6891	36	-14	-488	-14	0	multi-exon	FALSE	canonical	3	186	junction_32	92.1507460631763	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	NA	False	NA	NA	NA	156281959	156249746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
tx.14785	chr4	-	2971	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	41	junction_7	13.8596536753268	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGGCCCCCTTTGTA	8241	False	NA	NA	False	NA	NA	NA	156319321	156313792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
tx.14786	chr4	-	3420	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	22	-1	intron_retention	TRUE	canonical	3	45	junction_2	11.6999525165228	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGGCCCCCTTTGTA	8270	False	NA	NA	False	NA	NA	NA	156319292	156313792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
tx.14787	chr4	-	3525	9	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	23	0	intron_retention	FALSE	canonical	3	62	junction_4	8.67377512966528	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTTTGGCCCCCTT	8271	False	NA	NA	False	NA	NA	NA	156319291	156313796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_156315144_156315357_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
tx.14788	chr4	-	2699	12	FSM	ENSMUSG00002076083.1	ENSMUST00000105569.5	2723	12	19	5	19	0	multi-exon	TRUE	canonical	3	34	junction_1	16.0850014835956	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTTTGGCCCCCTT	8267	False	NA	NA	False	NA	NA	NA	156319295	156313796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
tx.14789	chr4	+	2593	19	FSM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	3	189	3	-176	multi-exon	TRUE	canonical	0	0	junction_6	452.638591421947	2022	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTTTTCGAG	NA	False	NA	NA	False	NA	NA	NA	156320469	156331884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
tx.1479	chr10	+	3028	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	-4	0	-4	0	multi-exon	TRUE	canonical	3	170	junction_2	11.5134703716994	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCTGACTTCTATTTG	NA	False	NA	NA	False	NA	NA	NA	52109710	52197472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
tx.14790	chr4	+	2228	6	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_4	6.89927532426414	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGTTTTAGGGTCAT	NA	False	NA	NA	False	NA	NA	NA	156390350	156410430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
tx.14791	chr4	+	1936	7	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_5	9.7581874455363	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGTTTTAGGGTCAT	NA	False	NA	NA	False	NA	NA	NA	156390364	156410430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
tx.14792	chr4	+	1896	7	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	33.1963853453957	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGTTTTAGGGTCAT	NA	False	NA	NA	False	NA	NA	NA	156390390	156410430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_156390627_156404917_156405012_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
tx.14793	chr4_JH584295v1_random	-	247	5	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	34.358405085219	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGGGAGGCCACGCC	NA	False	NA	NA	False	NA	NA	NA	1476	66	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_JH584295v1_random_-_110_564_634_707_753_971_1025_1439
tx.14794	chr5	+	3323	2	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAAATTTACTT	37	False	NA	NA	False	NA	NA	NA	3343963	3350711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_3344033_3347457
tx.14795	chr5	+	3944	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-199	992	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	3391285	3573217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
tx.14796	chr5	+	4758	8	FSM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	-1023	7790	-862	993	multi-exon	FALSE	canonical	3	9	junction_1	33.2627143099493	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	3392869	3573218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_3393972_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
tx.14797	chr5	+	3888	7	FSM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	-396	-1022	0	1022	multi-exon	FALSE	canonical	3	75	junction_5	14.1852818873021	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGGAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3393915	3573247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
tx.14798	chr5	+	2005	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-13	-501	-8	3	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTTGTGTATCAGT	NA	False	NA	NA	False	NA	NA	NA	3593824	3620241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
tx.14799	chr5	+	2408	10	FSM	ENSMUSG00000058503.12	ENSMUST00000196059.5	1961	10	-19	-428	-8	3	multi-exon	FALSE	canonical	0	0	junction_9	63.1977105383095	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTTGTGTATCAGT	NA	False	NA	NA	False	NA	NA	NA	3593824	3620241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
tx.1480	chr10	+	2810	10	FSM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	-17	2	1	0	multi-exon	FALSE	canonical	3	38	junction_1	48.9166587797331	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCTGACTTCTATTTG	NA	False	NA	NA	False	NA	NA	NA	52109715	52197472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_52109932_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
tx.14800	chr5	-	1892	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	474	2	-29	-2	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTGCTATCTGCGTG	1948	False	NA	NA	False	NA	NA	NA	3646111	3633979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
tx.14801	chr5	+	4227	24	FSM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	192	136	59	-134	multi-exon	FALSE	canonical	3	55	junction_8	11.5830199691965	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATGGTGGACCTCATTT	NA	False	NA	NA	False	NA	NA	NA	3646257	3687096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
tx.14802	chr5	-	2503	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-28	70	-28	-70	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATACTATTGAAAATGAT	NA	False	NA	NA	False	NA	NA	NA	3697962	3690030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
tx.14803	chr5	-	1434	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	-157	1	-29	-1	multi-exon	FALSE	canonical	3	421	junction_2	22.2910046630673	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATGTTACTTTATGCA	NA	False	NA	NA	False	NA	NA	NA	3697963	3693077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
tx.14804	chr5	-	5324	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-31014	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	19.9700030147259	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCATTCTCTGCCTTC	NA	False	NA	NA	False	NA	NA	NA	3783146	3740001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
tx.14805	chr5	-	6628	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-184	0	combination_of_known_junctions	TRUE	canonical	3	68	junction_14	13.2648286332828	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATTCTCTGCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	3853109	3739999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
tx.14806	chr5	-	6593	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-184	17	-184	-17	multi-exon	FALSE	canonical	3	27	junction_3	19.1839036868105	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGTGCTTCACACCACC	NA	False	NA	NA	False	NA	NA	NA	3853109	3740016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
tx.14807	chr5	-	2485	10	ISM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-186	32148	-186	11532	5prime_fragment	FALSE	canonical	3	68	junction_4	17.1269767715535	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGGAATTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	3853111	3772147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
tx.14808	chr5	-	3112	6	FSM	ENSMUSG00000040351.12	ENSMUST00000199763.2	1569	6	-322	-1221	-184	1221	multi-exon	FALSE	canonical	3	68	junction_5	15.4324333790883	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGATTATTTGTATT	NA	False	NA	NA	False	NA	NA	NA	3853109	3782458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
tx.14809	chr5	+	2985	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7976	False	NA	NA	False	NA	NA	NA	3853174	3891359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
tx.1481	chr10	-	4278	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-68	6	-19	2	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	284	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATATTTTGGTTTATT	NA	False	NA	NA	False	NA	NA	NA	52258239	52213153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
tx.14810	chr5	+	2952	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	-9	-13	-9	13	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTTCTGTAATCTAT	7976	False	NA	NA	False	NA	NA	NA	3853174	3891372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
tx.14811	chr5	+	3153	18	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	81.2733437320262	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	7976	False	NA	NA	False	NA	NA	NA	3853174	3891357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_3853484_3854256_3854427_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
tx.14812	chr5	+	4252	5	ISM	ENSMUSG00000000600.16	ENSMUST00000200577.5	3188	18	24228	2	-121	-2	3prime_fragment	FALSE	canonical	0	0	junction_4	95.7793688640722	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	NA	False	NA	NA	False	NA	NA	NA	3877416	3891357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
tx.14813	chr5	-	1360	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	15	1	-11	-1	multi-exon	FALSE	canonical	3	112	junction_1	0	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	NA	NA	NA	3943918	3940581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_3941898_3943874
tx.14814	chr5	+	4997	19	ISM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	117702	1108	12217	-1108	3prime_fragment	TRUE	canonical	3	47	junction_11	11.6327549468869	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTAGTTGAACCTTCTT	NA	False	NA	NA	False	NA	NA	NA	4095975	4130202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
tx.14815	chr5	-	3512	11	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	-65	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	223.58776800174	38	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTTTGCCAATGTAGA	NA	False	NA	NA	False	NA	NA	NA	4154486	4131139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_4131193_4131356_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
tx.14816	chr5	-	3176	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	273	482	-52	-482	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	1232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTTTGTATTCATGA	NA	False	NA	NA	False	NA	NA	NA	4154473	4131626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
tx.14817	chr5	+	1367	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	1	0	1	0	multi-exon	FALSE	canonical	3	119	junction_1	0	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	NA	NA	NA	4242367	4247651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_4242419_4246335
tx.14818	chr5	-	5321	15	FSM	ENSMUSG00000028926.16	ENSMUST00000030763.13	4851	15	-466	-4	-412	4	multi-exon	FALSE	canonical	0	0	junction_5	2.34846888896766	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGGTATGTAGTCGT	NA	False	NA	NA	False	NA	NA	NA	5430663	4853386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_4856732_4938836_4938981_4944027_4944168_4972126_4972176_4999531_4999596_5060832_5060927_5086425_5086547_5142957_5143082_5153791_5153855_5185318_5185414_5245277_5245358_5277163_5277259_5298982_5299229_5423457_5423490_5430034
tx.14819	chr5	-	3672	4	FSM	ENSMUSG00000046798.15	ENSMUST00000115445.8	3477	4	-81	-114	14	0	multi-exon	FALSE	canonical	3	7	junction_3	28.2842712474619	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	5564811	5555108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564627
tx.1482	chr10	+	3041	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	7	-981	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	165.410663199202	61	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGTAGTAGTATGTGA	NA	False	NA	NA	False	NA	NA	NA	52293649	52315298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_52293689_52305288_52305415_52306162_52306313_52309440_52309541_52312672
tx.14820	chr5	-	3610	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	-13	0	-13	0	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	5564886	5555108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
tx.14821	chr5	-	3711	4	NIC	ENSMUSG00000046798.15	novel	3597	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	26.5455583227527	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	5564915	5555108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_5558455_5561070_5561195_5563161_5563252_5564764
tx.14822	chr5	-	2997	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	83.4476253277438	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	NA	NA	NA	5609508	5587453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
tx.14823	chr5	-	2939	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	33	0	8	0	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	NA	NA	NA	5609505	5587453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
tx.14824	chr5	-	3179	23	FSM	ENSMUSG00000040473.16	ENSMUST00000054865.13	4956	23	4	1773	-3	-13	multi-exon	FALSE	canonical	2	4	junction_19	2.58132197536376	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAAACACCACTGTCTT	NA	False	NA	NA	False	NA	NA	NA	5714235	5631050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
tx.14825	chr5	-	3643	6	FSM	ENSMUSG00000015653.14	ENSMUST00000015797.11	3657	6	-221	235	38	-1	multi-exon	FALSE	canonical	3	20	junction_3	7.4565407529229	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTTTCCCACCATTGTC	5063	False	NA	NA	False	NA	NA	NA	5744288	5721725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743957
tx.14826	chr5	-	1236	5	FSM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	-7	1	-7	-1	multi-exon	FALSE	canonical	3	19	junction_3	6.38357266740185	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATCACAACTGTTT	NA	False	NA	NA	False	NA	NA	NA	5799333	5786317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_5786674_5789795_5789961_5790349_5790863_5792825_5792941_5799246
tx.14827	chr5	+	2258	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	16	-23	-15	23	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTCGTTTCACAAATA	NA	False	NA	NA	False	NA	NA	NA	8106542	8119174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
tx.14828	chr5	-	9207	29	NIC	ENSMUSG00000040537.18	novel	9161	30	NA	NA	-81	-3	combination_of_known_junctions	TRUE	canonical	3	20	junction_18	5.47955383257448	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCACAGCTCTCTTTCA	5980	False	NA	NA	False	NA	NA	NA	8418241	8122354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
tx.14829	chr5	-	2443	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	-41	0	-41	0	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	503	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	8472757	8447010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
tx.1483	chr10	+	3615	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	10	980	10	-980	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	584	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTAGTAGTATGTGAA	NA	False	NA	NA	False	NA	NA	NA	52293652	52315299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
tx.14830	chr5	+	2779	12	FSM	ENSMUSG00000054099.12	ENSMUST00000066921.10	2784	12	1	4	1	4	multi-exon	FALSE	canonical	3	29	junction_1	8.37055050175789	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGTATTTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	8472850	8504793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
tx.14831	chr5	+	2874	13	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.6829171678492	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGTATTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	8472845	8504792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_8473040_8474796_8474888_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
tx.14832	chr5	-	3622	10	FSM	ENSMUSG00000040570.15	ENSMUST00000047485.15	3677	10	53	2	53	-2	multi-exon	FALSE	canonical	3	27	junction_2	10.9352753469485	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTACTGGTCTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	8672899	8540335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_8542590_8544783_8544906_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
tx.14833	chr5	-	3858	11	FSM	ENSMUSG00000040570.15	ENSMUST00000115378.2	1891	11	-36	-1931	-36	-2	multi-exon	FALSE	canonical	3	15	junction_2	15.6920361967464	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTACTGGTCTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	8672988	8540335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_8542590_8544783_8544906_8562260_8562408_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
tx.14834	chr5	+	4503	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-9102	-52	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	59.4603280536266	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	NA	NA	NA	8760716	8798518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_8762145_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
tx.14835	chr5	+	3246	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8057	-52	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	59.5979728459529	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	NA	NA	NA	8761761	8798518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_8761933_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
tx.14836	chr5	+	3078	14	ISM	ENSMUSG00000040584.9	ENSMUST00000047753.5	4997	28	53107	57	-6635	-52	3prime_fragment	FALSE	canonical	3	48	junction_7	59.5291187263121	48	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	NA	NA	NA	8763183	8798518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
tx.14837	chr5	+	2464	6	ISM	ENSMUSG00000040584.9	ENSMUST00000126846.2	2705	10	13330	52	-139	-52	3prime_fragment	FALSE	canonical	3	112	junction_1	56.9582303095874	53	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	NA	NA	NA	8783148	8798518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
tx.14838	chr5	+	4344	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-39	1	0	-1	multi-exon	TRUE	canonical	3	66	junction_6	57.377196351684	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	NA	False	NA	NA	False	NA	NA	NA	8848146	8916314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
tx.14839	chr5	+	4287	27	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	62.5254149509853	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	NA	False	NA	NA	NA	8848146	8916315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
tx.1484	chr10	-	7359	13	FSM	ENSMUSG00000038594.10	ENSMUST00000220443.2	7425	13	68	-2	68	2	multi-exon	FALSE	canonical	2	8	junction_7	3.73794358200097	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTCATGGTGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	53255975	53149536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_53154341_53157444_53157677_53159932_53160041_53167859_53167911_53168353_53168472_53172309_53172465_53174148_53174302_53177597_53177778_53188603_53188722_53195693_53195816_53224567_53225356_53234144_53234304_53255604
tx.14840	chr5	+	1773	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50969	0	-178	0	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	5206	False	NA	NA	False	NA	NA	NA	8899154	8916315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
tx.14841	chr5	-	2836	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	153	7	-129	-7	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTTACGGTTGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	9047171	9016039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
tx.14842	chr5	+	1396	4	NIC	ENSMUSG00000079659.6	novel	1040	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	350	junction_1	2.82842712474619	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTTTTTTTCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	9150746	9169044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_9151396_9166479_9166531_9167458_9167564_9168453
tx.14843	chr5	+	1086	5	FSM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	-46	0	33	0	multi-exon	FALSE	canonical	3	208	junction_1	62.4019230472908	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTTTTTCCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	9150700	9169045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_9150860_9151216_9151396_9166479_9166531_9167458_9167564_9168453
tx.14844	chr5	-	3717	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	22	67	-2	0	multi-exon	FALSE	canonical	3	130	junction_6	37.7529760049699	239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	NA	False	NA	NA	NA	9211754	9168867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
tx.14845	chr5	-	3510	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	-8	-4	2	0	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	NA	False	NA	NA	NA	9211757	9168867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
tx.14846	chr5	-	3594	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_14	61.258640972111	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	NA	False	NA	NA	NA	9211756	9168869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
tx.14847	chr5	-	4932	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	158	junction_5	28.7793328623163	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	NA	False	NA	NA	NA	9211762	9168867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
tx.14848	chr5	+	4135	21	FSM	ENSMUSG00000056004.17	ENSMUST00000134991.8	4115	21	-20	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	2.3685438564654	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACCTTTGTGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	9316111	9513983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_9316457_9430277_9430399_9449180_9449377_9460583_9460732_9467984_9468072_9470616_9470723_9471504_9471658_9472301_9472391_9477689_9477871_9478404_9478534_9484620_9484712_9485326_9485430_9487705_9487844_9490719_9490984_9491633_9491808_9495363_9495554_9496893_9496991_9497719_9497822_9509179_9509307_9511321_9511501_9512868
tx.14849	chr5	+	4479	17	FSM	ENSMUSG00000063531.8	ENSMUST00000073957.8	6861	17	7	2375	7	0	multi-exon	FALSE	canonical	0	0	junction_1	1.82752393965168	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTCCACACGTTATTG	NA	False	NA	NA	False	NA	NA	NA	14075296	14304328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_14076039_14193887_14194049_14212201_14212262_14214072_14214193_14260304_14260399_14274300_14274421_14275566_14275710_14276429_14276545_14276648_14276719_14280120_14280266_14282008_14282232_14283638_14283731_14286055_14286098_14286280_14286448_14290583_14290652_14290976_14291117_14302351
tx.1485	chr10	+	4329	3	FSM	ENSMUSG00000112132.2	ENSMUST00000218737.2	1855	3	9	-2483	9	2483	multi-exon	FALSE	canonical	3	22	junction_1	4.5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCACAACTGTCATTGT	5703	False	NA	NA	False	NA	NA	NA	53285986	53302851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_53286053_53297604_53297685_53298668
tx.14850	chr5	+	5118	18	FSM	ENSMUSG00000028780.14	ENSMUST00000030568.14	5491	18	367	6	-1	-3	multi-exon	FALSE	canonical	0	0	junction_1	1.78420598683566	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAGATGTCTTTCACTT	NA	False	NA	NA	False	NA	NA	NA	17779645	17935260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_17779964_17781827_17781969_17858705_17858867_17860000_17860064_17867917_17868038_17875447_17875539_17877426_17877547_17880039_17880183_17881308_17881424_17883309_17883380_17886936_17887082_17899640_17899864_17916383_17916473_17919408_17919451_17921908_17922067_17926851_17926920_17929078_17929210_17932340
tx.14851	chr5	-	3242	8	FSM	ENSMUSG00000057614.7	ENSMUST00000074694.7	3135	8	-107	0	-107	0	multi-exon	FALSE	canonical	3	135	junction_3	12.7711409363583	352	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCTATTGACTGAATTT	NA	False	NA	NA	False	NA	NA	NA	18565460	18470132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_18472208_18476823_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
tx.14852	chr5	+	3738	7	ISM	ENSMUSG00000040003.19	ENSMUST00000197443.5	6578	21	1342123	-17	-33319	-2	3prime_fragment	FALSE	canonical	1	3	junction_2	2.03442593595562	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAACTGTGTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	20774175	20909788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_20774353_20805775_20805962_20807344_20807520_20814261_20814458_20816042_20816187_20856052_20856192_20907067
tx.14853	chr5	-	4504	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	20	-106	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	67.1548758002723	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	21087102	20963766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
tx.14854	chr5	-	4565	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	2	-107	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	58.3812563563855	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	21087120	20963767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
tx.14855	chr5	-	4676	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	14	-106	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	51.0853143531539	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	21087108	20963766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
tx.14856	chr5	-	4719	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	15	106	15	-106	multi-exon	TRUE	canonical	3	159	junction_9	38.2607155309617	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	21087107	20963766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
tx.14857	chr5	-	2462	8	FSM	ENSMUSG00000039987.16	ENSMUST00000140147.2	2000	8	-28	-434	18	434	multi-exon	FALSE	canonical	3	167	junction_2	38.2152870362805	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTAGTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	21087104	20997865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
tx.14858	chr5	+	875	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	272	0	-44	0	multi-exon	FALSE	canonical	3	465	junction_1	0	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCACATGCCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	21087460	21091868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_21087654_21091186
tx.14859	chr5	-	5550	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	4	-4	4	4	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTACCTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	21156816	21098021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
tx.1486	chr10	-	4707	13	ISM	ENSMUSG00000058298.11	ENSMUST00000237608.2	4882	14	435	3	-45	-3	3prime_fragment	FALSE	canonical	3	17	junction_3	8.05536398239638	55	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGTCTTTCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	53506100	53412413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
tx.14860	chr5	-	3407	18	FSM	ENSMUSG00000028771.14	ENSMUST00000030556.8	3280	18	-127	0	-127	0	multi-exon	FALSE	canonical	3	41	junction_17	13.1951023733656	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTATTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21261036	21191642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646
tx.14861	chr5	-	3263	17	NIC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	18.4483019205021	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTGTATTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21261002	21191643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21260646
tx.14862	chr5	+	3767	2	FSM	ENSMUSG00000039899.6	ENSMUST00000035799.6	3788	2	21	0	21	0	multi-exon	FALSE	canonical	3	6	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCGATGTGGAAACAGC	NA	False	NA	NA	False	NA	NA	NA	21577660	21583372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_21578307_21580251
tx.14863	chr5	+	2951	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	1	75	1	-75	multi-exon	FALSE	canonical	1	21	junction_1	12.2873753029984	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTTTTTATTAATATT	NA	False	NA	NA	False	NA	NA	NA	21629956	21687047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
tx.14864	chr5	+	3418	5	ISM	ENSMUSG00000047221.6	ENSMUST00000146056.2	941	6	2683	-1245	2683	-75	3prime_fragment	FALSE	canonical	3	49	junction_4	3.41869858279434	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTTTTTATTAATATT	NA	False	NA	NA	False	NA	NA	NA	21642409	21687047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
tx.14865	chr5	+	2080	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	141	0	3	0	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCAATTTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	21851017	21867692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
tx.14866	chr5	-	3955	4	ISM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	17508	0	17508	0	3prime_fragment	FALSE	canonical	3	67	junction_3	28.4292494136272	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGATACCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	21888884	21867898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153
tx.14867	chr5	-	3958	5	FSM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	-4	0	-2	0	multi-exon	FALSE	canonical	3	8	junction_4	48.8108594474631	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGATACCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	21906396	21867898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21905972
tx.14868	chr5	-	3718	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	8	-2	6	0	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGATACCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	21906386	21867898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
tx.14869	chr5	-	3121	3	ISM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	25389	7	25389	-5	3prime_fragment	FALSE	canonical	3	114	junction_2	10.5	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTACTTGAAAAGATAC	NA	False	NA	NA	False	NA	NA	NA	21881003	21867905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_21870361_21875486_21875602_21880452
tx.1487	chr10	+	1132	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-34	1103	-34	-50	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	270	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTCTTTTATATG	1487	False	NA	NA	False	NA	NA	NA	53473013	53484218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
tx.14870	chr5	+	1592	13	FSM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	19	4	19	2	multi-exon	TRUE	canonical	3	306	junction_5	33.8430815184827	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCGTTAGTCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	21942157	21962146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
tx.14871	chr5	-	2104	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	22	7	-13	-2	multi-exon	FALSE	canonical	3	849	junction_11	91.8299209136107	893	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGGAATTATAGTCAT	NA	False	NA	NA	False	NA	NA	NA	21990227	21962271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
tx.14872	chr5	+	1450	12	ISM	ENSMUSG00000028932.9	ENSMUST00000030769.7	1785	13	1466	1	1466	-1	3prime_fragment	FALSE	canonical	3	1482	junction_9	138.585355743117	839	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCTTCCAGATCTCT	NA	False	NA	NA	False	NA	NA	NA	21991746	22008784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
tx.14873	chr5	-	2087	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	17	-1	17	1	multi-exon	TRUE	canonical	3	527	junction_10	41.6678895284064	459	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTGTGTTCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	22755356	22691485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
tx.14874	chr5	+	2827	16	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	25	10529	17	-2502	5prime_fragment	FALSE	canonical	3	18	junction_10	3.53396220818629	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTGTAGTTCATGATTT	NA	False	NA	NA	False	NA	NA	NA	23639463	23698704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196
tx.14875	chr5	-	5173	16	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-22	891	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	105	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTAAGTCACTACCAAA	NA	False	NA	NA	False	NA	NA	NA	23880987	23709558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
tx.14876	chr5	-	4334	17	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-15	-5	combination_of_known_splicesites	FALSE	canonical	3	29	junction_15	81.8305938738685	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGGTGTGGTGGTGCAC	NA	False	NA	NA	False	NA	NA	NA	23880980	23710454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
tx.14877	chr5	-	3562	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-15	-686	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	39	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGCTTATTACCCTG	NA	False	NA	NA	False	NA	NA	NA	23880980	23711135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
tx.14878	chr5	-	2284	4	FSM	ENSMUSG00000105987.5	ENSMUST00000198984.5	345	4	-3	-1936	1	4	multi-exon	FALSE	canonical	2	2	junction_3	6.68331255192114	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTCTGAGGTCTTCTT	5258	False	NA	NA	False	NA	NA	NA	23917663	23903289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_23905472_23915363_23915407_23916113_23916149_23917639
tx.14879	chr5	-	3601	15	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	1122	-465	-58	457	3prime_fragment	TRUE	canonical	3	301	junction_13	30.0112223907617	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAAATAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	23983434	23945188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070
tx.1488	chr10	-	1631	8	NIC	ENSMUSG00000058298.11	novel	2421	8	NA	NA	-48	5	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	12.5795428358579	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCTAAAACTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	53506103	53484928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_53485111_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
tx.14880	chr5	-	3394	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	12	1	12	0	multi-exon	FALSE	canonical	3	301	junction_13	29.1369181623589	516	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATGTAAAAATCTTGT	NA	False	NA	NA	False	NA	NA	NA	23988697	23945646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
tx.14881	chr5	-	3330	16	NIC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	92.6118782878309	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGCATGTAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	23988709	23945649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
tx.14882	chr5	+	3290	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	3	5	-1	-4	multi-exon	TRUE	canonical	2	56	junction_5	10.4591040315534	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATATAAGTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	23992711	24025362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
tx.14883	chr5	-	385	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	32	708	32	-708	multi-exon	FALSE	canonical	3	3790	junction_2	61.5	458	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCTTTCATACTTT	NA	False	NA	NA	False	NA	NA	NA	24049127	24044649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_24044827_24046707_24046757_24048968
tx.14884	chr5	+	3866	2	NIC	ENSMUSG00000097180.6	novel	318	3	NA	NA	-1	-11	intron_retention	FALSE	canonical	3	27	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCAACAATCTGTCGTC	NA	False	NA	NA	False	NA	NA	NA	24055597	24060025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_24057154_24057715
tx.14885	chr5	+	1351	3	ISM	ENSMUSG00000097180.6	ENSMUST00000181574.6	1375	4	1523	0	1519	0	3prime_fragment	FALSE	canonical	0	0	junction_2	13.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCGTCAGGTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	24057117	24060036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_24057154_24057715_24057759_24058764
tx.14886	chr5	-	5967	12	NIC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	47	junction_11	7.3033446430527	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	NA	NA	NA	24235698	24165928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
tx.14887	chr5	+	2982	11	FSM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	-13	-3	-13	3	multi-exon	FALSE	canonical	3	50	junction_4	4.51220566907139	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTGCTTTGTTTATTC	NA	False	NA	NA	False	NA	NA	NA	24305589	24365786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
tx.14888	chr5	+	2878	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	35	1	-2	-1	multi-exon	TRUE	canonical	3	52	junction_5	7.43116560320265	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTGTCTGTTATCTAC	5181	False	NA	NA	False	NA	NA	NA	24369995	24389010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
tx.14889	chr5	-	4328	15	FSM	ENSMUSG00000038319.15	ENSMUST00000036092.10	4221	15	-130	23	-130	-23	multi-exon	FALSE	canonical	3	15	junction_8	4.79157423749955	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGGGTGCTGGTTAGCT	NA	False	NA	NA	False	NA	NA	NA	24556732	24524609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
tx.1489	chr10	-	3343	7	ISM	ENSMUSG00000058298.11	ENSMUST00000219838.3	4132	8	448	604	-32	-604	3prime_fragment	FALSE	canonical	3	32	junction_3	5.08811250749125	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTGTGACAATGGGC	NA	False	NA	NA	False	NA	NA	NA	53506087	53485537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
tx.14890	chr5	+	4028	26	FSM	ENSMUSG00000028978.13	ENSMUST00000030834.7	4132	26	-40	144	-40	3	multi-exon	FALSE	canonical	1	2	junction_12	2.97079114042034	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGAGTTACAATGATT	NA	False	NA	NA	False	NA	NA	NA	24569767	24589328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24570000_24571757_24571861_24572195_24572345_24572478_24572642_24573816_24573909_24573987_24574130_24574795_24574936_24575018_24575194_24575785_24575888_24576602_24576798_24576899_24576974_24577124_24577270_24577631_24577737_24582278_24582347_24582590_24582708_24582808_24582984_24584706_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
tx.14891	chr5	-	2057	9	ISM	ENSMUSG00000038295.15	ENSMUST00000059401.7	3902	14	4179	179	2	-179	3prime_fragment	FALSE	canonical	3	11	junction_1	5.09748712602592	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	9296	False	NA	NA	False	NA	NA	NA	24592962	24589357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686
tx.14892	chr5	-	2247	9	NIC	ENSMUSG00000038295.15	novel	1837	10	NA	NA	-156	-179	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	7.95986023746648	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	9998	False	NA	NA	False	NA	NA	NA	24593120	24589357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592654
tx.14893	chr5	+	2701	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	240	-2	-1	0	multi-exon	FALSE	canonical	3	156	junction_4	17.0567679626984	294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCTGTAGCTTAGTA	NA	False	NA	NA	False	NA	NA	NA	24599392	24614945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
tx.14894	chr5	+	4132	23	FSM	ENSMUSG00000028962.15	ENSMUST00000080067.13	4179	23	44	3	0	0	multi-exon	FALSE	canonical	3	23	junction_2	8.13471288485391	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGCTTGGTCTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	24630273	24645945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
tx.14895	chr5	-	2563	9	FSM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	-10	-1	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	118.721049102508	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	24650195	24646036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
tx.14896	chr5	-	1806	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	87	0	-3	0	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	976	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	24650198	24646036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
tx.14897	chr5	-	1908	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	1073	junction_8	121.867179236249	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	24650232	24646036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
tx.14898	chr5	-	1283	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	45	5	-18	3	multi-exon	FALSE	canonical	3	68	junction_2	11	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGTGTCTGTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	24652807	24650460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_24651272_24651531_24651951_24652754
tx.14899	chr5	+	2348	9	FSM	ENSMUSG00000023353.15	ENSMUST00000199647.2	1061	9	-433	-854	-276	0	multi-exon	FALSE	canonical	3	38	junction_8	47.1665930505904	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTCTTGGTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	24656898	24688180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24687263
tx.1490	chr10	-	5110	13	FSM	ENSMUSG00000003746.17	ENSMUST00000003843.16	5137	13	26	1	26	-1	multi-exon	FALSE	canonical	3	6	junction_11	2.28977194400568	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGTCTTGTCACTGT	5509	False	NA	NA	False	NA	NA	NA	53951866	53780881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_53783660_53784038_53784155_53795253_53795427_53796138_53796359_53801525_53801642_53809587_53809682_53810984_53811109_53853118_53853214_53890510_53890592_53901809_53901926_53906793_53906891_53950511_53951367_53951621
tx.14900	chr5	+	3179	16	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-288	3	combination_of_known_junctions	FALSE	canonical	3	94	junction_11	24.1655402036316	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTCCTTTGGTGCCT	NA	False	NA	NA	False	NA	NA	NA	24656886	24707038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
tx.14901	chr5	+	3480	18	FSM	ENSMUSG00000023353.15	ENSMUST00000024123.9	3207	18	-275	2	-275	-2	multi-exon	FALSE	canonical	3	41	junction_12	48.4543090880899	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTGGTGCCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	24656899	24707043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
tx.14902	chr5	-	2512	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	59	-2	59	2	multi-exon	FALSE	canonical	3	1197	junction_13	122.348082348837	1477	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	NA	False	NA	NA	NA	24782406	24770340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
tx.14903	chr5	+	4384	3	NIC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	-13	0	intron_retention	FALSE	canonical	3	41	junction_1	2.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTTTTAGGTCTAGG	NA	False	NA	NA	False	NA	NA	NA	24791725	24797482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_24793299_24794094_24795490_24796066
tx.14904	chr5	+	3726	4	FSM	ENSMUSG00000038181.17	ENSMUST00000121863.5	3715	4	-8	-3	0	3	multi-exon	FALSE	canonical	3	23	junction_2	9.8770215933527	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTAGGTCTAGGGAG	NA	False	NA	NA	False	NA	NA	NA	24791739	24797485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24793299_24794094_24794660_24795306_24795490_24796066
tx.14905	chr5	+	4521	3	NIC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	11.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTAGGTCTAGGGAG	NA	False	NA	NA	False	NA	NA	NA	24791740	24797485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_24794660_24795306_24795490_24796066
tx.14906	chr5	-	1566	12	ISM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	3146	0	72	0	3prime_fragment	FALSE	canonical	3	153	junction_8	20.0610638050861	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	24803864	24797619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
tx.14907	chr5	-	1906	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	-171	0	-171	0	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	6814	False	NA	NA	False	NA	NA	NA	24807181	24797619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
tx.14908	chr5	+	3098	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	443	5	-12	-5	multi-exon	TRUE	canonical	3	299	junction_1	111.175284472544	390	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAATGTCTGGTCTGAC	NA	False	NA	NA	False	NA	NA	NA	24890972	24915369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
tx.14909	chr5	+	3114	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	151	4	-12	-2	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	433	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTCTGGTCTGACGCA	NA	False	NA	NA	False	NA	NA	NA	24890972	24915372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
tx.1491	chr10	-	7162	33	FSM	ENSMUSG00000038122.10	ENSMUST00000099739.5	7240	33	2	76	2	-76	multi-exon	TRUE	non_canonical	1	5	junction_4	4.26639759486853	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTCTTATTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	56104783	55890464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
tx.14910	chr5	-	1326	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	33	425	18	419	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	819	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	25047589	25008245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
tx.14911	chr5	-	2192	12	FSM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	14	-1	-3	1	multi-exon	FALSE	canonical	3	116	junction_1	21.3386701313649	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTATGTATATGAG	NA	False	NA	NA	False	NA	NA	NA	25113453	25067744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
tx.14912	chr5	-	3778	16	NIC	ENSMUSG00000028944.15	novel	3331	16	NA	NA	-447	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	66.6035034113572	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTATGTATATGAG	NA	False	NA	NA	False	NA	NA	NA	25306087	25067744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
tx.14913	chr5	-	2193	12	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	87299	0	-2	0	3prime_fragment	FALSE	canonical	3	39	junction_11	38.9905688956947	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTTTATGTATATGA	NA	False	NA	NA	False	NA	NA	NA	25113452	25067745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320
tx.14914	chr5	-	3543	16	FSM	ENSMUSG00000028944.15	ENSMUST00000030784.14	3331	16	-215	3	-215	1	multi-exon	FALSE	canonical	3	8	junction_12	63.6806616381038	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTATGTATATGAG	NA	False	NA	NA	False	NA	NA	NA	25305855	25067744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
tx.14915	chr5	+	2565	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	-19	6	-19	-5	multi-exon	FALSE	canonical	3	184	junction_8	26.0711042984152	377	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGATGTTTGACTCTTCT	NA	False	NA	NA	False	NA	NA	NA	25427860	25470910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
tx.14916	chr5	+	3677	11	FSM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	-1190	6	-200	-5	multi-exon	FALSE	canonical	3	184	junction_7	27.2288449993752	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGATGTTTGACTCTTCT	NA	False	NA	NA	False	NA	NA	NA	25451170	25470910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
tx.14917	chr5	-	9292	23	NIC	ENSMUSG00000038056.16	novel	14967	59	NA	NA	-2848	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_19	15.4497318706841	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTGCACTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	25516396	25476794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25499554_25499720_25500395_25500609_25503867_25505575_25507703_25507937_25509675_25509740_25510906_25510986_25513436_25513549_25514597
tx.14918	chr5	-	3229	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	12	6	12	-6	multi-exon	FALSE	canonical	3	77	junction_1	2.5	158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCTATATTTCAT	NA	False	NA	NA	False	NA	NA	NA	25910811	25894815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_25897827_25903248_25903331_25910675
tx.14919	chr5	+	1968	11	NIC	ENSMUSG00000056367.15	novel	1712	12	NA	NA	-26	-1	combination_of_known_splicesites	TRUE	canonical	3	16	junction_6	37.7095478625772	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGTTCCTTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	25964968	26055685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
tx.1492	chr10	+	3126	2	FSM	ENSMUSG00000050953.11	ENSMUST00000068581.9	3071	2	-50	-5	-50	5	multi-exon	FALSE	canonical	3	36	junction_1	0	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGCATGTCTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	56253375	56266516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_56253615_56263629
tx.14920	chr5	+	2111	12	FSM	ENSMUSG00000056367.15	ENSMUST00000088244.6	1712	12	-54	-345	-25	-1	multi-exon	FALSE	canonical	3	90	junction_4	20.0016528242663	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGTTCCTTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	25964969	26055685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
tx.14921	chr5	+	2048	11	FSM	ENSMUSG00000056367.15	ENSMUST00000128727.8	2031	11	-17	0	-17	0	multi-exon	FALSE	canonical	3	28	junction_1	35.2080956599473	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	25964977	26055686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_25965127_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
tx.14922	chr5	+	4016	6	NNC	ENSMUSG00000061576.16	novel	4491	26	NA	NA	-41	51481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.98665181883831	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTGTTTCTGTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	27466931	27709273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27706069
tx.14923	chr5	-	3743	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-16	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.542771021642	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	27996409	27947046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_27947498_27949107_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
tx.14924	chr5	+	2696	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	1	0	1	0	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	1662	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	28276361	28283660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
tx.14925	chr5	+	5669	2	FSM	ENSMUSG00000045294.12	ENSMUST00000199728.2	757	2	-3301	-1611	2	0	multi-exon	FALSE	canonical	3	1139	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	28276362	28283660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_28280160_28281788
tx.14926	chr5	+	3643	2	FSM	ENSMUSG00000039095.9	ENSMUST00000036177.9	3539	2	-73	-31	-73	31	multi-exon	FALSE	canonical	3	25	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGATGGAAGGTAGAC	2356	False	NA	NA	False	NA	NA	NA	28370618	28377195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_28372183_28375116
tx.14927	chr5	+	2215	2	NNC	ENSMUSG00000039095.9	novel	3539	2	NA	NA	2469	31	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGATGGAAGGTAGAC	70	False	NA	NA	False	NA	NA	NA	28373160	28377195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_28373297_28375116
tx.14928	chr5	-	3522	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	82	-1620	82	-10	multi-exon	FALSE	canonical	3	175	junction_1	2	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTGTAAGAGACCAGTG	NA	False	NA	NA	False	NA	NA	NA	28414938	28405826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_28408435_28412284_28412382_28414121
tx.14929	chr5	-	6563	2	FSM	ENSMUSG00000044681.20	ENSMUST00000117098.2	2661	2	227	-4129	81	810	multi-exon	FALSE	canonical	3	179	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGAGCCACTGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	28414939	28406636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_28412382_28414121
tx.1493	chr10	+	2621	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-16	-1	-5	1	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCTTCTCATTGTTG	NA	False	NA	NA	False	NA	NA	NA	57362475	57389232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
tx.14930	chr5	+	6392	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	-16	3134	-16	0	multi-exon	FALSE	canonical	3	71	junction_15	26.3991792801721	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	28522158	28621103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
tx.14931	chr5	+	4000	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-42	-3	-17	3	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTATGTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	28522157	28560580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
tx.14932	chr5	+	6399	19	NIC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-27	-1	combination_of_known_junctions	TRUE	canonical	3	35	junction_15	30.0263772928626	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACCCTCATCTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	28522147	28621102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
tx.14933	chr5	+	6273	18	FSM	ENSMUSG00000048271.15	ENSMUST00000114884.8	6256	18	-17	0	-17	0	multi-exon	FALSE	canonical	3	22	junction_5	33.4726040951925	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	28522157	28621103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
tx.14934	chr5	+	3871	6	FSM	ENSMUSG00000048271.15	ENSMUST00000090355.11	1032	6	46	-2885	-10	1	multi-exon	FALSE	canonical	3	22	junction_5	51.3443278269372	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATTTTGTATGTTTTG	NA	False	NA	NA	False	NA	NA	NA	28522164	28560578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469
tx.14935	chr5	+	3023	4	ISM	ENSMUSG00000048271.15	ENSMUST00000144967.8	1211	5	14199	-2427	-2407	-1	3prime_fragment	FALSE	canonical	3	107	junction_1	5.18544972870135	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACCCTCATCTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	28613251	28621102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_28613460_28615568_28615758_28618284_28618374_28618565
tx.14936	chr5	+	1551	10	FSM	ENSMUSG00000029130.13	ENSMUST00000001247.12	1600	10	26	23	17	18	multi-exon	FALSE	canonical	3	8	junction_1	13.0421917418852	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAGAAGTAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	29401020	29430497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_29401111_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
tx.14937	chr5	-	5192	18	NNC	ENSMUSG00000010721.16	novel	3422	18	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	15.0406600017153	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTATACTTGTTTTATAA	NA	False	NA	NA	False	NA	NA	NA	29583368	29434805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29569918_29570205_29583124
tx.14938	chr5	-	2757	17	FSM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	-4	2173	2	144	multi-exon	FALSE	canonical	3	26	junction_2	11.2080816266656	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTGAATTTAGTTTC	NA	False	NA	NA	False	NA	NA	NA	29583386	29436972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
tx.14939	chr5	-	2187	9	ISM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	-5	56356	1	-28081	5prime_fragment	FALSE	canonical	3	35	junction_4	8.10863737011343	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATT	NA	False	NA	NA	False	NA	NA	NA	29583387	29491155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
tx.1494	chr10	-	2851	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	29	0	-24	0	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	421	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	NA	NA	NA	57408597	57391869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
tx.14940	chr5	+	3281	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	31	5907	31	5581	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	295	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCAGGCTCTTAAGTGA	2990	False	NA	NA	False	NA	NA	NA	29639692	29656934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
tx.14941	chr5	-	2383	3	FSM	ENSMUSG00000001566.10	ENSMUST00000165512.4	2245	3	-145	7	-145	-7	multi-exon	FALSE	canonical	2	3	junction_1	0.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATGTCAGGACCACT	NA	False	NA	NA	False	NA	NA	NA	29683613	29678038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_29679230_29679753_29679915_29682582
tx.14942	chr5	+	4944	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-18	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.055390459254	34	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATTGTGTTGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	29774221	29881061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824318_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
tx.14943	chr5	+	5039	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-18	27	-18	-27	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	871	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTGTTGGAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	29774221	29881063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
tx.14944	chr5	+	1548	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	46	11	-3	-11	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	685	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTGCAGCCTTCTT	4592	False	NA	NA	False	NA	NA	NA	29940983	29972090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
tx.14945	chr5	+	2600	10	FSM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	298	20	-3	-20	multi-exon	FALSE	canonical	3	618	junction_9	548.115559591832	984	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAGTTTTATACATTT	4592	False	NA	NA	False	NA	NA	NA	29940983	29991456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
tx.14946	chr5	-	1020	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-7	2150	-7	87	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	588	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATCACCGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30278622	30265974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
tx.14947	chr5	+	2591	3	ISM	ENSMUSG00000044576.7	ENSMUST00000058045.5	3865	6	9524	0	9524	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGGGTGTTGGCTGA	NA	False	NA	NA	False	NA	NA	NA	30319682	30323376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_30319986_30320884_30321055_30321258
tx.14948	chr5	-	2719	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	175	1123	3	-1	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	476	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	30359985	30324424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
tx.14949	chr5	+	2007	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	18	8	-6	3	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	30360263	30389583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
tx.1495	chr10	+	6552	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	-12	7	-12	1	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATTTTCATGACTAC	NA	False	NA	NA	False	NA	NA	NA	58091306	58141414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
tx.14950	chr5	+	3314	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	36	3453	-18	1	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTTGTCACTGTTGAA	NA	False	NA	NA	False	NA	NA	NA	30437614	30473972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
tx.14951	chr5	+	6651	10	NIC	ENSMUSG00000075703.17	novel	6803	10	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	19.440952067323	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTGTTTTCAAGTT	NA	False	NA	NA	False	NA	NA	NA	30437669	30477423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462760_30468068_30468118_30469272_30469454_30470335_30470522_30471898
tx.14952	chr5	+	3034	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	2	52	2	-52	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTGTTTTGGAATTT	6680	False	NA	NA	False	NA	NA	NA	30805278	30817021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
tx.14953	chr5	+	1051	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	9	-29	-6	-2	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGTGGCAGTCCCGCCA	9195	False	NA	NA	False	NA	NA	NA	30824249	30831751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
tx.14954	chr5	+	915	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	129	422	-6	-1	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTGGCAGTCCCGCCAT	9195	False	NA	NA	False	NA	NA	NA	30824249	30831752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
tx.14955	chr5	-	4320	1	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATGTATGTCAAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	30839085	30834765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_30834800_30839100
tx.14956	chr5	+	1415	9	NIC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-25	98	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	19.6050854372023	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCCCTTATTTTATA	NA	False	NA	NA	False	NA	NA	NA	30869212	30944376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30944046
tx.14957	chr5	+	4878	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	306	7	-24	-1	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCCTCTGTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	30869213	30956712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
tx.14958	chr5	+	3609	5	NIC	ENSMUSG00000029166.15	novel	2442	6	NA	NA	4	3	intron_retention	FALSE	canonical	2	5	junction_2	4.49305018890286	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTCCTCAATTGACCC	2302	False	NA	NA	False	NA	NA	NA	30972080	31023406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_30972243_31019150_31019279_31019841_31022073_31022158_31022312_31022471
tx.14959	chr5	+	3181	3	FSM	ENSMUSG00000029166.15	ENSMUST00000202025.2	488	3	-1889	-804	-1889	0	multi-exon	FALSE	canonical	3	15	junction_2	0.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGATTTCCTCAATTGA	NA	False	NA	NA	False	NA	NA	NA	31019976	31023403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31022073_31022158_31022312_31022471
tx.1496	chr10	+	6411	22	NIC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	20.4558038047165	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATTTTCATGACTAC	NA	False	NA	NA	False	NA	NA	NA	58091327	58141414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
tx.14960	chr5	+	2784	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1609	1717	-10	0	multi-exon	TRUE	canonical	3	358	junction_2	22.5422346662881	652	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	31026964	31034807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
tx.14961	chr5	+	3133	12	FSM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	-12	0	6	0	multi-exon	FALSE	canonical	3	26	junction_1	7.05585742252082	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGATGACTACTCTG	NA	False	NA	NA	False	NA	NA	NA	31046305	31060831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396
tx.14962	chr5	+	3648	15	NIC	ENSMUSG00000029165.18	novel	3199	15	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_13	11.0787993897519	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	31046304	31064008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062974_31063106_31063459
tx.14963	chr5	+	3678	16	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	6.71118469422501	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	31046321	31064008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
tx.14964	chr5	-	469	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	41	634	-22	-1	multi-exon	FALSE	canonical	3	823	junction_2	132.5	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTTTGTGGTCCCAA	NA	False	NA	NA	False	NA	NA	NA	31065091	31063862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31064111_31064742_31064881_31065008
tx.14965	chr5	-	581	2	FSM	ENSMUSG00000038803.8	ENSMUST00000132034.5	576	2	-6	1	-6	-1	multi-exon	FALSE	canonical	3	1088	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTTTGTGGTCCCAA	NA	False	NA	NA	False	NA	NA	NA	31065075	31063862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31064111_31064742
tx.14966	chr5	+	3691	8	FSM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	159	2	159	-2	multi-exon	TRUE	canonical	2	6	junction_1	4.70345075232981	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTATTCTGCTCTAGT	NA	False	NA	NA	False	NA	NA	NA	31070904	31078619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31071389_31072325_31072452_31072860_31073082_31074277_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
tx.14967	chr5	+	1334	7	FSM	ENSMUSG00000029162.16	ENSMUST00000201571.4	1087	7	-48	-199	-48	0	multi-exon	FALSE	canonical	3	16	junction_1	5.24933858267454	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTGTCTGTCTGT	1094	False	NA	NA	False	NA	NA	NA	31078885	31088589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31079352_31082082_31082200_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
tx.14968	chr5	-	1396	6	FSM	ENSMUSG00000029161.9	ENSMUST00000031051.9	1442	6	46	0	46	0	multi-exon	FALSE	canonical	3	13	junction_4	4.51663591625449	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTTGGTCCAG	5342	False	NA	NA	False	NA	NA	NA	31102889	31090486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093325_31102701
tx.14969	chr5	+	1365	9	FSM	ENSMUSG00000006638.16	ENSMUST00000201125.4	1352	9	-13	0	-13	0	multi-exon	FALSE	canonical	3	60	junction_5	7.48331477354788	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGAGGTTCCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	31107396	31112435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111610_31111748_31111798_31111877_31112044_31112159
tx.1497	chr10	+	5732	18	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	14186	7	-3763	1	3prime_fragment	FALSE	canonical	3	66	junction_7	11.8309897446959	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATTTTCATGACTAC	NA	False	NA	NA	False	NA	NA	NA	58105504	58141414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
tx.14970	chr5	-	2316	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	0	1	intron_retention	TRUE	canonical	3	234	junction_6	22.518926280272	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	NA	False	NA	NA	NA	31117624	31112385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
tx.14971	chr5	-	2030	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	80	4190	-1	0	multi-exon	FALSE	canonical	3	205	junction_7	28.1735691739616	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	31117625	31112386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
tx.14972	chr5	-	3145	18	NIC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	14	0	combination_of_known_junctions	TRUE	canonical	3	63	junction_17	22.1293773649543	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	747	False	NA	NA	False	NA	NA	NA	31205409	31193379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
tx.14973	chr5	-	3116	18	FSM	ENSMUSG00000006641.13	ENSMUST00000114668.7	3436	18	320	0	-163	0	multi-exon	FALSE	canonical	3	19	junction_17	28.8754634169437	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	570	False	NA	NA	False	NA	NA	NA	31205586	31193379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205515
tx.14974	chr5	-	3228	18	FSM	ENSMUSG00000006641.13	ENSMUST00000080431.8	3218	18	-10	0	-10	0	multi-exon	FALSE	canonical	2	5	junction_17	31.4360998487793	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	31206278	31193379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31206095
tx.14975	chr5	+	963	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	1	2	1	-2	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCGTACCTGTGCG	909	False	NA	NA	False	NA	NA	NA	31205979	31211965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
tx.14976	chr5	+	7135	44	FSM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	2	0	2	0	multi-exon	TRUE	canonical	3	481	junction_6	136.90610173497	597	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7055	False	NA	NA	False	NA	NA	NA	31212125	31235823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
tx.14977	chr5	-	2005	8	FSM	ENSMUSG00000029151.15	ENSMUST00000031037.14	2089	8	84	0	-62	0	multi-exon	FALSE	canonical	3	15	junction_5	6.02037357305871	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCAGTCCAATTCCTC	3828	False	NA	NA	False	NA	NA	NA	31250875	31243449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31244263_31245300_31245436_31245648_31245755_31245951_31246151_31246662_31246817_31246897_31247045_31247399_31247582_31250606
tx.14978	chr5	+	1562	6	FSM	ENSMUSG00000053856.8	ENSMUST00000066544.5	1565	6	1	2	1	-2	multi-exon	FALSE	canonical	3	10	junction_2	5.93295878967653	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGTGTGTGTGGGAC	NA	False	NA	NA	False	NA	NA	NA	31265663	31269868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31265766_31266230_31266347_31266838_31267053_31267521_31267664_31268456_31268524_31268947
tx.14979	chr5	+	1537	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	-104	1	-104	-1	multi-exon	TRUE	canonical	2	14	junction_1	4.29389100932942	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCGGCTCCTTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	31273951	31294971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
tx.1498	chr10	+	4229	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	94	4	94	-4	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	612	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTGTGTTACATATCAT	NA	False	NA	NA	False	NA	NA	NA	58159381	58260509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
tx.14980	chr5	-	4329	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	220	3	-13	-3	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	611	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGAGCTTGGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	31337268	31313351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
tx.14981	chr5	-	4460	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-15	-3	combination_of_known_junctions	TRUE	canonical	3	165	junction_17	146.210507369935	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGAGCTTGGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	31337270	31313351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
tx.14982	chr5	-	4289	18	ISM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	5648	3	5	-3	3prime_fragment	FALSE	canonical	3	433	junction_16	63.3729554927753	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGAGCTTGGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	31331840	31313351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575
tx.14983	chr5	-	4931	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_18	143.423797894454	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGAGCTTGGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	31337233	31313351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
tx.14984	chr5	-	1982	12	FSM	ENSMUSG00000029145.13	ENSMUST00000114603.8	1966	12	-15	-1	-15	0	multi-exon	FALSE	canonical	3	556	junction_3	55.8517814183514	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGACTCTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	31350373	31344910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925
tx.14985	chr5	-	1697	13	FSM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	319	9	28	0	multi-exon	FALSE	canonical	3	556	junction_3	56.1372326436643	555	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGACTCTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	31350455	31344910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
tx.14986	chr5	+	1959	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	59	0	-8	0	multi-exon	TRUE	canonical	3	351	junction_8	24.4791664857432	427	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	NA	False	NA	NA	NA	31350629	31356244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
tx.14987	chr5	-	2189	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	39	0	-39	0	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	NA	False	NA	NA	NA	31359608	31356324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
tx.14988	chr5	-	5304	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-9	3356	intron_retention	FALSE	canonical	3	16	junction_3	82.6935440177903	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTTCAGCGGTACAGTA	NA	False	NA	NA	False	NA	NA	NA	31359656	31352968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_31357492_31357578_31358167_31358926_31359083_31359619
tx.14989	chr5	-	2216	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	91	0	-31	0	multi-exon	FALSE	canonical	3	595	junction_8	38.6382398699386	695	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTCATAGTGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	31377940	31360011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
tx.1499	chr10	+	4272	11	NNC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	105	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	106.018866245589	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTGTGTTACATATCAT	NA	False	NA	NA	False	NA	NA	NA	58159392	58260509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_58159510_58186868_58186923_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
tx.14990	chr5	+	2087	19	NIC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	109.789191939219	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTTGTGTTGTGCTTGC	NA	False	NA	NA	False	NA	NA	NA	31398235	31408907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_31398347_31401106_31401177_31401261_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
tx.14991	chr5	+	2171	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	29	3	-2	0	multi-exon	FALSE	canonical	3	461	junction_13	30.9676692663879	478	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTTGTGTTGTGCTTGC	NA	False	NA	NA	False	NA	NA	NA	31398236	31408907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
tx.14992	chr5	+	931	7	FSM	ENSMUSG00000029149.15	ENSMUST00000201937.4	889	7	-41	-1	-7	1	multi-exon	FALSE	canonical	3	67	junction_1	11.9361728465293	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTGATTACAGTTA	NA	False	NA	NA	False	NA	NA	NA	31409027	31410542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
tx.14993	chr5	+	1002	6	FSM	ENSMUSG00000029149.15	ENSMUST00000201333.4	1027	6	30	-5	-1	0	multi-exon	FALSE	canonical	3	82	junction_3	7.52063827078527	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATTACAGTTACTTG	NA	False	NA	NA	False	NA	NA	NA	31409064	31410546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
tx.14994	chr5	-	5415	48	FSM	ENSMUSG00000038564.12	ENSMUST00000041565.11	5403	48	-14	2	-5	1	multi-exon	TRUE	canonical	3	41	junction_37	14.3941162971073	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGCATTCTTTGCTC	NA	False	NA	NA	False	NA	NA	NA	31448465	31410622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
tx.14995	chr5	-	2312	7	FSM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	8	13	8	-13	multi-exon	FALSE	canonical	3	9	junction_5	5.32290647422377	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTATAATTTGAGT	NA	False	NA	NA	False	NA	NA	NA	31453272	31449598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
tx.14996	chr5	+	3293	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	3	3	3	2	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	365	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7149	False	NA	NA	False	NA	NA	NA	31609781	31639095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
tx.14997	chr5	+	3237	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	77.4128093764563	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7149	False	NA	NA	False	NA	NA	NA	31609781	31639098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
tx.14998	chr5	+	3829	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	284	junction_12	29.0684059112677	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7193	False	NA	NA	False	NA	NA	NA	31609825	31639098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
tx.14999	chr5	-	1298	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1202	2	intron_retention	FALSE	canonical	3	124	junction_1	0	79	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	720	False	NA	NA	False	NA	NA	NA	31646494	31643974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_31645206_31646427
tx.15	chr1	+	4426	7	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	86	83	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	61.5485355002231	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	7159239	7242966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
tx.1500	chr10	+	10218	29	FSM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-60	-550	-58	550	multi-exon	TRUE	canonical	3	152	junction_18	69.5662490738439	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATTTAAAACATTTGAT	NA	False	NA	NA	False	NA	NA	NA	58282683	58330728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
tx.15000	chr5	-	1426	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1202	2	intron_retention	FALSE	canonical	3	94	junction_1	0	61	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	720	False	NA	NA	False	NA	NA	NA	31646494	31643974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_31645334_31646427
tx.15001	chr5	+	2117	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	3	558	intron_retention	FALSE	canonical	3	859	junction_7	68.3745302644844	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTAAGCTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	31652099	31668761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
tx.15002	chr5	+	1644	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	13	1487	1	558	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	641	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTAAGCTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	31652097	31668761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
tx.15003	chr5	-	2652	5	FSM	ENSMUSG00000053134.14	ENSMUST00000065388.11	2693	5	35	6	-2	0	multi-exon	FALSE	canonical	3	72	junction_3	3.34477204006491	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGTTATTCCAATTCT	NA	False	NA	NA	False	NA	NA	NA	31684082	31671913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680606_31683958
tx.15004	chr5	+	2512	14	FSM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	-17	4	0	0	multi-exon	FALSE	canonical	3	47	junction_11	21.8978262140197	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGAGGTGATGATCAT	NA	False	NA	NA	False	NA	NA	NA	31684338	31711382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
tx.15005	chr5	+	2423	13	NIC	ENSMUSG00000029141.17	novel	2424	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	26.846270173382	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAGGTGATGATCATT	NA	False	NA	NA	False	NA	NA	NA	31684338	31711383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705957_31706026_31708056_31708127_31711082
tx.15006	chr5	+	2427	13	FSM	ENSMUSG00000029141.17	ENSMUST00000114533.9	2424	13	0	-3	0	2	multi-exon	FALSE	canonical	3	47	junction_10	19.394300422776	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGTGATGATCATTC	NA	False	NA	NA	False	NA	NA	NA	31684338	31711384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082
tx.15007	chr5	+	2755	2	FSM	ENSMUSG00000106918.4	ENSMUST00000201620.2	2741	2	-14	0	14	0	multi-exon	FALSE	canonical	3	2333	junction_1	0	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	NA	False	NA	NA	NA	31771342	31779986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31773832_31779720
tx.15008	chr5	+	406	3	NNC	ENSMUSG00000106918.4	novel	478	4	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1166.5	337	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTCTCTTAGAGGTA	NA	False	NA	NA	False	NA	NA	NA	31771342	31779987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_31771375_31773724_31773832_31779720
tx.15009	chr5	+	1579	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	295	14	9	-14	multi-exon	FALSE	canonical	3	639	junction_9	56.490326824983	426	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTCTTTCAAGTCTTT	5847	False	NA	NA	False	NA	NA	NA	31855322	32242292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
tx.1501	chr10	+	6124	10	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	30517	-553	30244	553	3prime_fragment	FALSE	canonical	3	267	junction_1	37.0705033985543	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTAAAACATTTGATTAC	NA	False	NA	NA	False	NA	NA	NA	58313260	58330731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
tx.15010	chr5	+	2969	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	224	2769	-85	-2	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1941	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTGAGTGATTATTCT	2919	False	NA	NA	False	NA	NA	NA	32616410	32650098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
tx.15011	chr5	+	2530	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-75	-2	intron_retention	FALSE	canonical	0	0	junction_1	552.155050687757	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTGAGTGATTATTCT	2929	False	NA	NA	False	NA	NA	NA	32616420	32650098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_32616752_32640769_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
tx.15012	chr5	+	2220	4	FSM	ENSMUSG00000014956.16	ENSMUST00000202078.2	383	4	-120	-1717	-50	0	multi-exon	FALSE	canonical	0	0	junction_1	632.928291532479	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAGTGATTATTCTGT	2954	False	NA	NA	False	NA	NA	NA	32616445	32650100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_32616752_32640769_32640809_32642602_32642675_32648297
tx.15013	chr5	+	4615	12	FSM	ENSMUSG00000014932.16	ENSMUST00000072311.13	4586	12	-29	0	-16	0	multi-exon	FALSE	canonical	3	102	junction_1	199.348401357942	212	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	32768498	32844401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
tx.15014	chr5	+	4150	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	-13	-1480	-13	0	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	1076	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	32768501	32844401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
tx.15015	chr5	+	3877	11	NIC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	32	junction_1	229.089414858042	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	32768501	32844401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_32768720_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
tx.15016	chr5	+	4808	11	ISM	ENSMUSG00000014932.16	ENSMUST00000168707.6	2259	13	28120	0	-76	0	intron_retention	FALSE	canonical	3	692	junction_7	69.2445665738475	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	81	True	NA	NA	NA	32796798	32844401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
tx.15017	chr5	-	2172	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	8	3	1	1	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	685	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	32942982	32893647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
tx.15018	chr5	-	6985	6	ISM	ENSMUSG00000054280.15	ENSMUST00000120129.9	9959	11	24745	5	-833	-5	3prime_fragment	FALSE	canonical	3	105	junction_2	17.4974283824795	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	NA	False	NA	NA	False	NA	NA	NA	32986855	32947168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301
tx.15019	chr5	-	9830	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	7	-5	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7060	False	NA	NA	False	NA	NA	NA	33011593	32947168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
tx.1502	chr10	+	2155	12	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-28	34593	-28	-34593	5prime_fragment	FALSE	canonical	3	46	junction_9	6.71497647731614	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCTTCACCTATTTAAG	915	False	NA	NA	False	NA	NA	NA	58333741	58377473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619
tx.15020	chr5	-	9956	11	FSM	ENSMUSG00000054280.15	ENSMUST00000120129.9	9959	11	-2	5	-2	-5	multi-exon	FALSE	canonical	3	28	junction_10	39.1414102965133	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7051	False	NA	NA	False	NA	NA	NA	33011602	32947168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011436
tx.15021	chr5	-	9360	9	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-44	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	40.2670771226321	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7009	False	NA	NA	False	NA	NA	NA	33011644	32947168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33011436
tx.15022	chr5	+	5314	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	12	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	26.9931964217138	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCTCTCCCTCC	2005	False	NA	NA	False	NA	NA	NA	33021056	33149017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
tx.15023	chr5	+	5245	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	49	junction_32	32.536676783431	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2005	False	NA	NA	False	NA	NA	NA	33021056	33149014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
tx.15024	chr5	+	5414	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-3	12	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	31.4394642018125	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCTCTCCCTCC	2010	False	NA	NA	False	NA	NA	NA	33021061	33149017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
tx.15025	chr5	+	5378	43	FSM	ENSMUSG00000037426.19	ENSMUST00000119705.8	7929	43	-8	2559	5	11	multi-exon	FALSE	canonical	3	86	junction_1	24.5195673630974	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2018	False	NA	NA	False	NA	NA	NA	33021069	33149016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
tx.15026	chr5	+	1720	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	44	0	-18	0	multi-exon	FALSE	canonical	3	1727	junction_1	0	1517	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTGGCCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	33176203	33185310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_33176499_33183885
tx.15027	chr5	+	3961	15	FSM	ENSMUSG00000011034.7	ENSMUST00000011178.5	4104	15	-28	171	-28	-171	multi-exon	TRUE	canonical	0	0	junction_1	3.0572763655761	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTTTCCCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	33261534	33320043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_33261936_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
tx.15028	chr5	-	2468	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	693	junction_8	73.9275588033129	969	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGCACCAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	33432335	33405067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
tx.15029	chr5	+	2144	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	46	3	-6	-3	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	922	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	33492898	33530637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
tx.1503	chr10	+	2477	16	FSM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-22	0	-22	0	multi-exon	FALSE	canonical	3	28	junction_12	10.0598210719674	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGAGTCCCTTCTTT	921	False	NA	NA	False	NA	NA	NA	58333747	58412066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
tx.15030	chr5	+	2708	14	FSM	ENSMUSG00000037355.15	ENSMUST00000087864.12	7326	14	-137	4755	10	4480	multi-exon	FALSE	canonical	1	2	junction_13	2.37342286469869	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTTGTTTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	33535902	33572343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_33536347_33536569_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152_33566325_33566770_33566894_33568202_33568387_33568904_33569017_33571242_33571418_33572141
tx.15031	chr5	-	3342	2	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGATGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	33692863	33689451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_33689998_33690067
tx.15032	chr5	-	2002	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	1	6	1	3	multi-exon	FALSE	canonical	3	127	junction_2	26.6187903556867	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	33786978	33757696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
tx.15033	chr5	-	1679	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	224	3	3	-3	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	940	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTGCCCTATACTGTT	NA	False	NA	NA	False	NA	NA	NA	33809694	33797401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
tx.15034	chr5	-	2329	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	498	1	-19	-1	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTTCATTTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	33815262	33810560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
tx.15035	chr5	-	3178	4	NIC	ENSMUSG00000019295.9	novel	2369	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	28.5773803324704	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTACTTCATTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	33815762	33810562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_33811959_33812056_33812217_33812666_33813142_33814615
tx.15036	chr5	-	4143	3	ISM	ENSMUSG00000019295.9	ENSMUST00000140931.2	2369	4	-8	-2	-8	-1	intron_retention	FALSE	canonical	3	62	junction_2	5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTTCATTTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	33815251	33810560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_33811959_33812056_33812217_33812666
tx.15037	chr5	-	2392	4	FSM	ENSMUSG00000019295.9	ENSMUST00000140931.2	2369	4	-24	1	-24	-1	multi-exon	FALSE	canonical	1	1	junction_3	31.3793987620328	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTACTTCATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	33815267	33810563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814905
tx.15038	chr5	+	2199	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-12	0	-12	0	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	906	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	33815917	33829542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
tx.15039	chr5	+	4182	18	FSM	ENSMUSG00000054252.19	ENSMUST00000067150.14	4218	18	33	3	33	1	multi-exon	FALSE	canonical	2	4	junction_16	3.88235294117647	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTCGATTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	33879100	33894408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_33879273_33879649_33879856_33884990_33885261_33885535_33885590_33887024_33887195_33887279_33887404_33887487_33887679_33889460_33889606_33890065_33890257_33890600_33890747_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892476_33892583_33892757
tx.1504	chr10	-	2192	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	346	-6	346	6	multi-exon	FALSE	canonical	3	22	junction_1	10.8639169436269	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	59057323	58999935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
tx.15040	chr5	-	2125	12	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	13104	2644	741	217	3prime_fragment	FALSE	canonical	3	324	junction_8	48.0321861785502	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTTTAATTTTCATCA	9270	False	NA	NA	False	NA	NA	NA	33927057	33899660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704
tx.15041	chr5	-	2543	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	85	2644	5	217	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	551	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTTTAATTTTCATCA	NA	False	NA	NA	False	NA	NA	NA	33940076	33899660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
tx.15042	chr5	+	4957	23	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-323	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	58.7572397508639	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	33977745	34052839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_33978222_33979002_33979036_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
tx.15043	chr5	+	4988	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-317	2471	-317	0	multi-exon	FALSE	canonical	3	189	junction_2	30.2485912519455	316	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	33977751	34052839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
tx.15044	chr5	+	4987	23	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-319	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	54.8431459815812	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	33977749	34052839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
tx.15045	chr5	+	5465	11	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-324	1909	combination_of_known_junctions	TRUE	canonical	3	37	junction_10	74.4366173331379	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGATGCCT	NA	False	NA	NA	False	NA	NA	NA	33977744	34031755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
tx.15046	chr5	+	4665	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	51.8276841421399	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	33978004	34052839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
tx.15047	chr5	+	5111	10	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-28	1921	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	98.0088179454366	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTGTGTTTATGTAC	NA	False	NA	NA	False	NA	NA	NA	33978040	34031767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
tx.15048	chr5	+	4817	22	NIC	ENSMUSG00000057406.17	novel	7153	22	NA	NA	-219	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	69.2052388144502	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	33977849	34052839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
tx.15049	chr5	-	2204	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	122	254	-41	-254	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	764	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTGTGTTTCAGGCGA	NA	False	NA	NA	False	NA	NA	NA	34093635	34055513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
tx.1505	chr10	-	3774	9	ISM	ENSMUSG00000019917.11	ENSMUST00000220156.2	1821	10	322	22488	322	5	5prime_fragment	FALSE	canonical	3	43	junction_1	6.39824194603486	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTATTTCCTAAAATGT	NA	False	NA	NA	False	NA	NA	NA	59057347	58999936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
tx.15050	chr5	-	2918	4	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	88	13	-6	-13	intron_retention	FALSE	canonical	3	453	junction_3	32.3144274623924	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTACTATGCCTGCTG	9414	False	NA	NA	False	NA	NA	NA	34326783	34311236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748
tx.15051	chr5	-	1980	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	79	14	0	-14	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTACTATGCCTGCT	9405	False	NA	NA	False	NA	NA	NA	34326792	34311237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
tx.15052	chr5	-	4107	13	FSM	ENSMUSG00000037224.16	ENSMUST00000094868.10	3983	13	-124	0	-1	0	multi-exon	FALSE	canonical	2	8	junction_2	9.95685135416256	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTCTGGCGTCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	34445794	34352236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_34353445_34353920_34354025_34354825_34354931_34356122_34356240_34356936_34357089_34373904_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
tx.15053	chr5	-	4807	10	Fusion	ENSMUSG00000086291.2_ENSMUSG00000037224.16	novel	712	4	NA	NA	2	0	intron_retention	FALSE	canonical	2	2	junction_2	9.93062354289081	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTTTTGATTATTCT	NA	False	NA	NA	False	NA	NA	NA	34445779	34369153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr5_-_34371410_34371553_34371699_34373904_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
tx.15054	chr5	-	7087	9	Fusion	ENSMUSG00000086291.2_ENSMUSG00000037224.16	novel	712	4	NA	NA	-60	0	intron_retention	FALSE	canonical	2	11	junction_3	7.31009575860672	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTTTTGATTATTCT	NA	False	NA	NA	False	NA	NA	NA	34445853	34369153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr5_-_34371410_34371553_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
tx.15055	chr5	-	3204	8	ISM	ENSMUSG00000037224.16	ENSMUST00000094868.10	3983	13	-161	20922	-38	1788	5prime_fragment	FALSE	canonical	2	11	junction_2	7.32343178170074	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGGTTTTATACATTG	NA	False	NA	NA	False	NA	NA	NA	34445831	34373158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
tx.15056	chr5	-	2044	7	NNC	ENSMUSG00000037224.16	novel	712	4	NA	NA	-90	-667	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.97914491994847	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTTTTTGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	34445883	34384598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_34385540_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
tx.15057	chr5	+	2888	7	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	981.947667761486	462	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	NA	False	NA	NA	NA	34493734	34510780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
tx.15058	chr5	+	2925	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	2857	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	NA	False	NA	NA	NA	34493754	34510780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
tx.15059	chr5	+	2911	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	1293	junction_4	355.934919144872	246	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	NA	False	NA	NA	NA	34493754	34510780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
tx.1506	chr10	+	2631	15	FSM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	69	1343	1	5	multi-exon	FALSE	canonical	3	22	junction_8	56.7996838163088	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTGGTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	59159186	59207783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
tx.15060	chr5	+	5536	21	FSM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	-2	2	-2	-2	multi-exon	FALSE	canonical	3	34	junction_1	17.141980632354	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCCAGTCTGGTTGCTT	1441	False	NA	NA	False	NA	NA	NA	34527274	34643798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
tx.15061	chr5	+	5542	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	17.252536045463	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1440	False	NA	NA	False	NA	NA	NA	34527273	34643800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
tx.15062	chr5	-	1998	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	-4	-7	-4	7	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGGCTGGAATGTGTG	NA	False	NA	NA	False	NA	NA	NA	34671339	34653423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
tx.15063	chr5	-	2184	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-2	7	intron_retention	FALSE	canonical	3	117	junction_4	10.0623058987491	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGGCTGGAATGTGTG	NA	False	NA	NA	False	NA	NA	NA	34671337	34653423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_34654295_34656523_34657081_34658251_34658342_34660880_34661172_34670962
tx.15064	chr5	+	3869	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	-117	9	-9	5	multi-exon	FALSE	canonical	3	389	junction_14	43.2925501438664	712	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTAAGGTTGGGGGCA	NA	False	NA	NA	False	NA	NA	NA	34731099	34789643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
tx.15065	chr5	-	1635	12	ISM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	411	4	29	0	3prime_fragment	FALSE	canonical	3	315	junction_11	36.4653123977358	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	NA	False	NA	NA	NA	34794122	34790989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937
tx.15066	chr5	-	1736	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114331.10	1754	13	19	-1	-1	1	multi-exon	TRUE	canonical	3	36	junction_12	99.4937183946806	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	NA	False	NA	NA	NA	34794537	34790988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
tx.15067	chr5	-	1870	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	33	4	-16	0	multi-exon	FALSE	canonical	3	174	junction_12	65.1670929227321	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	NA	False	NA	NA	NA	34794500	34790989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
tx.15068	chr5	-	2671	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	31	0	31	0	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	983	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGTGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	34817461	34795879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
tx.15069	chr5	+	10069	67	FSM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	10	3136	-7	-3136	multi-exon	FALSE	canonical	3	38	junction_2	19.3734266519568	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTATGCCCGTGTAA	1566	False	NA	NA	False	NA	NA	NA	34919097	35066742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
tx.1507	chr10	+	2631	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	-3	290	1	5	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTGGTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	59159186	59207783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
tx.15070	chr5	+	6624	20	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	121167	13	-3540	-13	3prime_fragment	FALSE	canonical	3	65	junction_1	10.0549735491841	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGCTGTTTGAGGCT	NA	False	NA	NA	False	NA	NA	NA	35040254	35069865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
tx.15071	chr5	+	3109	18	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	123710	3127	-997	-3127	3prime_fragment	FALSE	canonical	3	79	junction_3	6.1216050544695	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGTAAAGTGTGTGA	236	False	NA	NA	False	NA	NA	NA	35042797	35066751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
tx.15072	chr5	+	5163	16	NIC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	5	6	intron_retention	FALSE	canonical	2	7	junction_15	4.72534537244516	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGCTGGAAACTCCTT	8639	False	NA	NA	False	NA	NA	NA	35106796	35190792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35189214
tx.15073	chr5	-	2907	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	63	11	-7	-11	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	932	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTCTTTCTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	35263047	35248855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
tx.15074	chr5	-	3745	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	21.9474372080204	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCCCAATTTAATAGAAATA	7637	False	NA	NA	False	NA	NA	NA	35732403	35713551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35731902
tx.15075	chr5	-	3776	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	0	14	0	-14	multi-exon	FALSE	canonical	3	72	junction_3	7.3	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACAGTCCCAATTTA	7626	False	NA	NA	False	NA	NA	NA	35732414	35713560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
tx.15076	chr5	+	3964	19	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	12.8490764427681	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	NA	False	NA	NA	NA	35740391	35771145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35740479_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
tx.15077	chr5	+	4116	19	NIC	ENSMUSG00000029098.18	novel	2956	19	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	17.0171482138851	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTTTCTCCCCTGT	NA	False	NA	NA	False	NA	NA	NA	35740423	35771144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35740664_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
tx.15078	chr5	-	4320	18	FSM	ENSMUSG00000036553.17	ENSMUST00000070203.14	4549	18	228	1	-36	0	multi-exon	FALSE	canonical	3	19	junction_17	20.7093914138867	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	NA	False	NA	NA	NA	35886392	35854524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35886290
tx.15079	chr5	-	4309	18	FSM	ENSMUSG00000036553.17	ENSMUST00000201511.2	4246	18	-61	-2	-61	0	multi-exon	FALSE	canonical	3	51	junction_17	16.3400287573917	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	NA	False	NA	NA	NA	35897392	35854524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
tx.1508	chr10	-	2873	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	91	junction_7	16.9957977999605	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCATCTCGTTCTTTA	5629	False	NA	NA	False	NA	NA	NA	59452515	59282805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
tx.15080	chr5	+	3388	16	NIC	ENSMUSG00000029095.18	novel	2953	19	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	24.7246166131381	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTGCGAAAGGACAAAAT	1508	False	NA	NA	False	NA	NA	NA	35915218	36042315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36032176_36032258_36040649
tx.15081	chr5	+	2570	17	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	28.6552787458088	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGAGTTTAGTTTTAC	1511	False	NA	NA	False	NA	NA	NA	35915221	36041485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
tx.15082	chr5	+	2992	18	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	26.7032908822983	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTCTCACATCAACCT	1516	False	NA	NA	False	NA	NA	NA	35915226	36041810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
tx.15083	chr5	+	3486	17	NIC	ENSMUSG00000029095.18	novel	3528	20	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	26.2413676282316	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCGAAAGGACAAAATGT	1511	False	NA	NA	False	NA	NA	NA	35915221	36042317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36032176_36032258_36040649
tx.15084	chr5	+	2425	15	NIC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	13	-21	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	27.0672820043321	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAGACATATATGCAG	1526	False	NA	NA	False	NA	NA	NA	35915236	36041472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
tx.15085	chr5	+	2791	20	NIC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-21	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	30.378133993561	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACATATATGCAGA	1536	False	NA	NA	False	NA	NA	NA	35915246	36041473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
tx.15086	chr5	+	6564	17	FSM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	51	3	51	-3	multi-exon	FALSE	canonical	3	11	junction_3	3.8155725323993	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGTCTGAGTCGTCAC	2056	False	NA	NA	False	NA	NA	NA	36050713	36161264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_36050885_36092895_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
tx.15087	chr5	-	5714	27	FSM	ENSMUSG00000029093.15	ENSMUST00000037370.14	5707	27	-10	3	5	-3	multi-exon	FALSE	canonical	0	0	junction_26	3.95836317854419	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAACAGGGTCGGTCTC	NA	False	NA	NA	False	NA	NA	NA	36555478	36174526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36554909
tx.15088	chr5	+	976	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	169	2383	169	-2383	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	993	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTGCACAGTCTACC	NA	False	NA	NA	False	NA	NA	NA	36622510	36629041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
tx.15089	chr5	-	3791	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	-1	1	-1	-1	multi-exon	FALSE	canonical	3	130	junction_1	0	278	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTCTGTTTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	36641630	36631014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_36634307_36641131
tx.1509	chr10	+	2340	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	99	3	13	-1	multi-exon	FALSE	canonical	2	105	junction_7	32.1836157690049	226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGAGCTCTGTGTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	59538397	59699951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
tx.15090	chr5	-	4584	14	FSM	ENSMUSG00000029192.18	ENSMUST00000031094.15	4590	14	5	1	-2	0	multi-exon	FALSE	canonical	3	20	junction_13	25.6258929704419	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCACTGTGTACTTTGG	8930	False	NA	NA	False	NA	NA	NA	36739736	36647948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739698
tx.15091	chr5	-	3831	12	FSM	ENSMUSG00000029192.18	ENSMUST00000171385.8	3884	12	51	2	-24	1	multi-exon	FALSE	canonical	3	47	junction_11	14.7609043598508	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCACTGTGTACTTT	8835	False	NA	NA	False	NA	NA	NA	36687916	36647950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
tx.15092	chr5	-	4689	14	FSM	ENSMUSG00000029192.18	ENSMUST00000140607.8	4649	14	-40	0	-29	0	multi-exon	FALSE	canonical	3	13	junction_13	26.7829319490414	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	9490	False	NA	NA	False	NA	NA	NA	36739176	36647951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739030
tx.15093	chr5	-	5199	4	ISM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	80019	0	-2188	0	3prime_fragment	FALSE	canonical	3	76	junction_2	0.816496580927726	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	36773262	36757828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589
tx.15094	chr5	-	6729	9	FSM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	-52	0	-19	0	multi-exon	FALSE	canonical	2	71	junction_5	5.18260311040697	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	36853333	36757828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
tx.15095	chr5	-	6606	8	NIC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	24.0882730381234	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTTTGTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	36853313	36757833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_36760148_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
tx.15096	chr5	-	1571	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	30	47	30	-47	multi-exon	FALSE	canonical	3	1678	junction_1	0	823	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGCCCGGAGAGTTACT	NA	False	NA	NA	False	NA	NA	NA	36954086	36952257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_36953289_36953546
tx.15097	chr5	-	3328	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	16	-14	16	14	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACCTCTCTTTTCACC	965	False	NA	NA	False	NA	NA	NA	36987981	36964250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
tx.15098	chr5	+	4109	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	-21	0	-21	0	multi-exon	TRUE	canonical	3	174	junction_3	14.0890028036054	160	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTCGCAAGGCTGC	NA	False	NA	NA	False	NA	NA	NA	37025835	37112422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
tx.15099	chr5	-	3552	8	FSM	ENSMUSG00000039474.14	ENSMUST00000043964.13	3787	8	233	2	-39	1	multi-exon	FALSE	canonical	3	110	junction_7	10.259888211986	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGCCTTCTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	37146316	37123449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
tx.1510	chr10	+	3061	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	8	1	8	-1	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCAGTGGTGGGTCTGC	NA	False	NA	NA	False	NA	NA	NA	59715404	59735117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
tx.15100	chr5	-	3677	9	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	53.8468604005842	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGCCTTCTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	37146311	37123449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_37126023_37126736_37126867_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
tx.15101	chr5	+	4433	22	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-24	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	81.5182741779002	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTGAGTCACTGAGTCG	NA	False	NA	NA	False	NA	NA	NA	37185654	37307961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956_37299161_37300136_37300203_37305325_37305374_37306444
tx.15102	chr5	+	2538	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	26.6327909832138	63	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	37185667	37282641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
tx.15103	chr5	+	2021	11	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5735	22704	25	-2	internal_fragment	FALSE	canonical	3	147	junction_1	11.74265728019	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	2505	False	NA	NA	False	NA	NA	NA	37248448	37282641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
tx.15104	chr5	+	2955	14	FSM	ENSMUSG00000029121.17	ENSMUST00000031004.11	2906	14	-19	-30	-19	-2	multi-exon	FALSE	canonical	1	2	junction_4	2.40069023605034	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGAGTGGGTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	37403088	37449475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_37403441_37422575_37422665_37426026_37426212_37430690_37430856_37433620_37433683_37435428_37435510_37436206_37436276_37437002_37437124_37437810_37437968_37440195_37440338_37441371_37441543_37443711_37443892_37446148_37446315_37448460
tx.15105	chr5	-	4302	21	FSM	ENSMUSG00000029122.12	ENSMUST00000031005.11	4325	21	20	3	4	-3	multi-exon	FALSE	canonical	1	3	junction_11	2.64764045897474	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTGTTCTTGCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	37494218	37456517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_37457845_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
tx.15106	chr5	+	4095	20	FSM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	-4	0	-4	0	multi-exon	FALSE	canonical	3	11	junction_14	7.49034466215639	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAAGAGTGGACCTCAT	8838	False	NA	NA	False	NA	NA	NA	37495838	37582399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
tx.15107	chr5	-	1927	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	1	7	0	-7	multi-exon	FALSE	canonical	2	10	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGATGTCTGTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	37981926	37977835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_37979045_37981208
tx.15108	chr5	+	1549	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	507	946	-2	2	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTGCAGTCAGTGAGTC	NA	False	NA	NA	False	NA	NA	NA	38196592	38294163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
tx.15109	chr5	-	1703	5	FSM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	412	466	-22	-466	multi-exon	TRUE	canonical	3	5	junction_1	2.8613807855649	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGATTGTTTTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	38316839	38295001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
tx.1511	chr10	+	3002	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	32	7	13	-1	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCAGTGGTGGGTCTGC	NA	False	NA	NA	False	NA	NA	NA	59715409	59735117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
tx.15110	chr5	-	3223	9	NIC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	16.9170771707172	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCAGTTTCTAAGCATTA	NA	False	NA	NA	False	NA	NA	NA	38377799	38357419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38369189_38369433_38370651_38371728_38373790_38373958_38377666
tx.15111	chr5	-	2796	8	FSM	ENSMUSG00000029127.16	ENSMUST00000094833.10	2978	8	16	166	-10	0	multi-exon	FALSE	canonical	3	18	junction_5	10.0772526220277	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATATTTTGTAAATT	NA	False	NA	NA	False	NA	NA	NA	38377785	38357589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
tx.15112	chr5	+	1625	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	16	-4	combination_of_known_junctions	FALSE	canonical	3	190	junction_2	843.03156656333	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCTATGATAACAAATT	NA	False	NA	NA	False	NA	NA	NA	38377841	38391646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_38377980_38380477_38380572_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
tx.15113	chr5	+	1515	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	41	7	-9	3	multi-exon	FALSE	canonical	3	2026	junction_5	151.553981719386	794	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTATCTATGATAACAA	NA	False	NA	NA	False	NA	NA	NA	38377854	38391643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
tx.15114	chr5	+	1094	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	189	8	3	-8	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCATTTGGTTAATGC	NA	False	NA	NA	False	NA	NA	NA	38417717	38426970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
tx.15115	chr5	-	6589	3	FSM	ENSMUSG00000046572.11	ENSMUST00000178760.2	425	3	-22	-6142	-22	-1	multi-exon	FALSE	canonical	3	25	junction_1	98.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGCTCTCTCATTTCGG	NA	False	NA	NA	False	NA	NA	NA	38842122	38825827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_38832018_38839827_38840126_38842021
tx.15116	chr5	-	6473	2	NIC	ENSMUSG00000046572.11	novel	6816	3	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	NA	False	NA	NA	NA	38842124	38825826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_38832197_38842021
tx.15117	chr5	-	6827	4	FSM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-22	-1	-15	-1	multi-exon	FALSE	canonical	3	45	junction_3	106.871677986057	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGCTCTCTCATTTCGG	NA	False	NA	NA	False	NA	NA	NA	38842115	38825827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021
tx.15118	chr5	-	6766	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	49	1	-20	-1	multi-exon	FALSE	canonical	3	222	junction_2	31	353	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGCTCTCTCATTTCGG	NA	False	NA	NA	False	NA	NA	NA	38842120	38825827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_38832197_38839827_38840126_38842021
tx.15119	chr5	-	1636	2	FSM	ENSMUSG00000051022.8	ENSMUST00000053116.7	1684	2	-28	76	-28	-76	multi-exon	FALSE	canonical	3	8	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAATAGCTCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	39802005	39771357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_39772748_39801759
tx.1512	chr10	-	1754	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	1	0	1	0	multi-exon	FALSE	canonical	3	721	junction_1	4.5	574	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCTCATCGGCGCCA	NA	False	NA	NA	False	NA	NA	NA	59787655	59785490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_59786852_59787138_59787395_59787518
tx.15120	chr5	-	1739	8	FSM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	-42	0	-6	0	multi-exon	FALSE	canonical	3	81	junction_2	195.851880725393	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	41865506	41782318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
tx.15121	chr5	-	1644	7	FSM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	-9	0	-6	0	multi-exon	FALSE	canonical	3	424	junction_3	45.374980869295	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	41865506	41782318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
tx.15122	chr5	-	7126	18	ISM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	23609	4	3336	-4	3prime_fragment	FALSE	canonical	3	23	junction_1	26.3728916079505	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTGAGTGACAAGAAT	NA	False	NA	NA	False	NA	NA	NA	41978049	41944884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550
tx.15123	chr5	-	10384	26	FSM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	11	4	11	-4	multi-exon	FALSE	canonical	3	41	junction_22	25.3587381389532	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTGAGTGACAAGAAT	NA	False	NA	NA	False	NA	NA	NA	42001647	41944884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
tx.15124	chr5	-	5977	17	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	4352	-5	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	22.1440595871669	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACTTGAGTGACAAGAA	NA	False	NA	NA	False	NA	NA	NA	41977033	41944885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550
tx.15125	chr5	-	10524	27	FSM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	11	5	11	-5	multi-exon	FALSE	canonical	3	23	junction_1	28.7549584095699	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACTTGAGTGACAAGAA	NA	False	NA	NA	False	NA	NA	NA	42001647	41944885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
tx.15126	chr5	-	6362	17	ISM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	24064	172	3791	-172	3prime_fragment	FALSE	canonical	3	71	junction_16	13.9239003156443	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGGTTTTTTTATTGTT	NA	False	NA	NA	False	NA	NA	NA	41977594	41945052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550
tx.15127	chr5	+	6347	10	NIC	ENSMUSG00000039782.16	novel	7050	11	NA	NA	-78	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_2	4.92160768674447	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGTAATCTTATTCT	NA	False	NA	NA	False	NA	NA	NA	43391191	43447067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
tx.15128	chr5	-	1983	2	FSM	ENSMUSG00000104846.2	ENSMUST00000197178.2	372	2	-29	-1582	-29	1582	multi-exon	FALSE	canonical	2	7	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTTGTCTTCGTT	NA	False	NA	NA	False	NA	NA	NA	43512631	43508807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_43510700_43512540
tx.15129	chr5	+	4970	35	NIC	ENSMUSG00000039765.16	novel	4512	34	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	5.72140097054418	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTAGTCTGTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	43829637	43898314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_43829747_43831033_43831158_43838630_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
tx.1513	chr10	-	1320	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	33	499	9	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	59838924	59823729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
tx.15130	chr5	-	2725	12	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	155.880543371047	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8865	False	NA	NA	False	NA	NA	NA	43939455	43901957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_43902718_43908203_43908353_43915563_43915754_43915849_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
tx.15131	chr5	-	2834	11	FSM	ENSMUSG00000039753.17	ENSMUST00000047857.16	2858	11	22	2	-7	-2	multi-exon	FALSE	canonical	3	499	junction_3	32.2155242080584	789	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTTTTGTGTTGTGAT	8850	False	NA	NA	False	NA	NA	NA	43939470	43901959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
tx.15132	chr5	-	8319	10	FSM	ENSMUSG00000039753.17	ENSMUST00000124610.6	2306	10	-26	-5987	-7	-3	multi-exon	FALSE	canonical	3	499	junction_2	33.8234340562579	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATCTTTTGTGTTGTGA	8850	False	NA	NA	False	NA	NA	NA	43939470	43901960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
tx.15133	chr5	-	3658	9	FSM	ENSMUSG00000039753.17	ENSMUST00000087465.11	4237	9	-5	584	-5	-584	multi-exon	FALSE	canonical	3	499	junction_1	35.8704265377483	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTTCCCTGTTTGGGTG	8852	False	NA	NA	False	NA	NA	NA	43939468	43913830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
tx.15134	chr5	+	2808	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	269	193	-38	-193	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGCTTGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	44026163	44069524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
tx.15135	chr5	-	3707	27	FSM	ENSMUSG00000029086.16	ENSMUST00000087441.11	3664	27	-43	0	-43	0	multi-exon	FALSE	canonical	3	24	junction_7	5.3433861125628	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGGTGTTTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	44259066	44150963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
tx.15136	chr5	-	3764	28	FSM	ENSMUSG00000029086.16	ENSMUST00000074113.13	3966	28	201	1	-72	-1	multi-exon	FALSE	canonical	2	5	junction_24	9.32068513939636	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTGTTTGGTCCTTA	NA	False	NA	NA	False	NA	NA	NA	44259095	44150962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44215967_44215995_44220467_44220527_44251736_44252111_44258989
tx.15137	chr5	-	3545	14	FSM	ENSMUSG00000046985.12	ENSMUST00000055128.12	3513	14	-37	5	-33	0	multi-exon	FALSE	canonical	3	70	junction_1	11.6390487421138	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTGAATTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	44384001	44332500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
tx.15138	chr5	-	1361	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	19	0	19	0	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	720	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	NA	False	NA	NA	NA	45607559	45591394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
tx.15139	chr5	+	2211	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	36	20	36	-20	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	2390	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTTTGTTCACTGTG	NA	False	NA	NA	False	NA	NA	NA	45650751	45670013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
tx.1514	chr10	-	1370	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	9	0	9	0	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	59838924	59823729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
tx.15140	chr5	+	800	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	88	3672	14	-1	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	411	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTTTGTATTCATC	7420	False	NA	NA	False	NA	NA	NA	45677658	45682946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
tx.15141	chr5	+	3293	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-12	422	-12	-3	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	660	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	45827248	45857466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
tx.15142	chr5	-	5599	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	109	0	-5	0	multi-exon	FALSE	canonical	3	11	junction_1	22.5197444232586	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGATGTTTTTCAAAGT	NA	False	NA	NA	False	NA	NA	NA	46014848	45854522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
tx.15143	chr5	-	5497	6	FSM	ENSMUSG00000015882.19	ENSMUST00000190036.7	5463	6	-33	-1	1	1	multi-exon	FALSE	canonical	3	25	junction_1	19.1562000407179	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAGATGTTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	46014842	45854524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_45859340_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
tx.15144	chr5	-	4933	7	FSM	ENSMUSG00000015882.19	ENSMUST00000016026.14	4884	7	9	-58	-3	2	multi-exon	FALSE	canonical	3	22	junction_1	18.7349939951952	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTATACTGAGTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	46014846	45887674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
tx.15145	chr5	+	7745	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	92	junction_15	20.6287548022501	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	NA	False	NA	NA	NA	48140496	48462853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
tx.15146	chr5	+	7721	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	17	2222	1	0	multi-exon	FALSE	canonical	3	71	junction_14	20.9676913758442	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	NA	False	NA	NA	NA	48140496	48462853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
tx.15147	chr5	+	1573	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	42	1	42	-1	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGTAGTTCTACATATA	NA	False	NA	NA	False	NA	NA	NA	48529712	48546186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
tx.15148	chr5	+	1483	8	FSM	ENSMUSG00000029089.9	ENSMUST00000200566.5	1422	8	-62	1	42	0	multi-exon	FALSE	canonical	3	22	junction_4	26.2717354134182	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	False	NA	NA	False	NA	NA	NA	48529712	48546187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48536671_48536807_48537465_48537574_48539128_48539210_48545444
tx.15149	chr5	-	4478	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	3	-1	3	1	multi-exon	FALSE	canonical	3	391	junction_6	33.7942668086734	1055	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTGCTGGTGGCTTA	NA	False	NA	NA	False	NA	NA	NA	50216345	50117296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
tx.1515	chr10	+	1456	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	221	junction_7	12.5797456254091	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	59838654	59935808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
tx.15150	chr5	-	2866	14	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	1	18550	1	9015	5prime_fragment	FALSE	canonical	3	391	junction_1	38.4304489732299	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGGCTGTCGGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	50216347	50135847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
tx.15151	chr5	-	2997	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	2	11	2	-11	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	1280	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCCCAAGTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	52347854	52307555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
tx.15152	chr5	-	3344	12	FSM	ENSMUSG00000045790.11	ENSMUST00000059428.7	3295	12	-51	2	-51	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.385694607919935	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATGGTTTCCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	52628914	52531994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_52534021_52542446_52542564_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561532_52562377_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400_52596563_52628692
tx.15153	chr5	-	2000	8	FSM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	-72	4345	-72	-4345	multi-exon	FALSE	canonical	3	32	junction_6	6.36636570147348	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCTCAGAGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	52723717	52695203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
tx.15154	chr5	-	5246	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	-7	13	-7	-13	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAATAATCTACACTGAA	NA	False	NA	NA	False	NA	NA	NA	52827057	52797441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
tx.15155	chr5	+	2989	9	NIC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	45.8023948609677	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTCTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	52898928	52926682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_52899311_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
tx.15156	chr5	+	3125	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	14	0	14	0	multi-exon	FALSE	canonical	3	134	junction_2	14.8099065943487	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTCTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	52898929	52926682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
tx.15157	chr5	+	4242	5	FSM	ENSMUSG00000029179.15	ENSMUST00000157074.6	4194	5	-19	-29	13	29	multi-exon	FALSE	canonical	3	102	junction_3	7.15454401062709	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCCCCCCTTCCCTGTG	NA	False	NA	NA	False	NA	NA	NA	52940408	52957539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923
tx.15158	chr5	+	2801	12	FSM	ENSMUSG00000029179.15	ENSMUST00000031077.13	5743	12	14	2928	14	1459	multi-exon	FALSE	canonical	3	82	junction_6	13.7197450763007	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGCATTTTATAATTT	NA	False	NA	NA	False	NA	NA	NA	52940409	52977985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
tx.15159	chr5	+	2471	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	14	0	14	0	multi-exon	FALSE	canonical	3	81	junction_12	14.4327944472148	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	NA	False	NA	NA	NA	52940409	52982007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
tx.1516	chr10	+	4416	5	ISM	ENSMUSG00000058297.17	ENSMUST00000121820.9	5238	11	19919	0	19670	0	3prime_fragment	FALSE	canonical	2	6	junction_4	1.92028643696715	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAGAAACCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	59961959	59971020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
tx.15160	chr5	+	2701	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	95	1058	-19	-3	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	495	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTCTGTTCCATCCTT	NA	False	NA	NA	False	NA	NA	NA	52991448	53024081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
tx.15161	chr5	+	919	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	3	0	3	0	multi-exon	FALSE	canonical	3	318	junction_1	5	131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3410	False	NA	NA	False	NA	NA	NA	53424482	53435882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_53424701_53434484_53434542_53435238
tx.15162	chr5	+	5276	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-24	0	-24	0	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	379	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGATGTCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	53713151	53814700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
tx.15163	chr5	+	5346	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	109	4	-45	0	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGATGTCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	53747664	53814700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
tx.15164	chr5	+	5385	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	52	3	52	1	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	392	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTAGATGTCTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	53747864	53814701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
tx.15165	chr5	+	2021	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	21	231	0	-4	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCTTCTTGTCAGTTTG	NA	False	NA	NA	False	NA	NA	NA	53966989	54061076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
tx.15166	chr5	+	3827	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	-16	1123	-16	0	multi-exon	TRUE	canonical	3	168	junction_8	27.7566163655824	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGAATGAGTTTG	NA	False	NA	NA	False	NA	NA	NA	54155824	54277276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
tx.15167	chr5	-	7434	33	FSM	ENSMUSG00000037999.14	ENSMUST00000076623.8	7306	33	-128	0	-89	0	multi-exon	FALSE	canonical	1	2	junction_29	4.00183063578408	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCCTCTTGTGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	62923591	62759787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_62762000_62763417_62763553_62769046_62769111_62771336_62771373_62772346_62772430_62779181_62779310_62787475_62787605_62793294_62793413_62796304_62796380_62798670_62798740_62800137_62800286_62803525_62803632_62807031_62807245_62811388_62811553_62826131_62826196_62826369_62826569_62827222_62827326_62828278_62828424_62833294_62833430_62833854_62834030_62834444_62834628_62835287_62835374_62840697_62840898_62842903_62843020_62855583_62855763_62863950_62864072_62872075_62872146_62887863_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
tx.15168	chr5	-	3069	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	2	170	2	-2	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	559	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGCGACATCTTACAG	NA	False	NA	NA	False	NA	NA	NA	64126238	64066409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
tx.15169	chr5	+	2316	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	5	48	5	-48	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	521	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTCTCAGTTACTTA	NA	False	NA	NA	False	NA	NA	NA	64250297	64285646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
tx.1517	chr10	-	6154	4	FSM	ENSMUSG00000057337.14	ENSMUST00000135158.9	6108	4	-41	-5	-41	5	multi-exon	FALSE	canonical	2	3	junction_2	0.942809041582063	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTAGTGGTTATTTTTC	NA	False	NA	NA	False	NA	NA	NA	60055123	60017348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_60022706_60023894_60024141_60029914_60030068_60054725
tx.15170	chr5	+	5659	20	FSM	ENSMUSG00000029174.19	ENSMUST00000101195.9	5432	20	-232	5	159	0	multi-exon	FALSE	canonical	3	10	junction_1	77.9717968757502	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	64317321	64508824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
tx.15171	chr5	+	4840	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-85	5	-85	0	multi-exon	FALSE	canonical	3	216	junction_12	24.8002513925928	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8431	False	NA	NA	False	NA	NA	NA	64387656	64508824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
tx.15172	chr5	+	4395	18	ISM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	26544	5	-18477	0	3prime_fragment	FALSE	canonical	3	216	junction_11	25.2452331997143	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	64414285	64508824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
tx.15173	chr5	-	1558	4	FSM	ENSMUSG00000105402.5	ENSMUST00000198582.5	2879	4	-50	1371	-50	0	multi-exon	FALSE	canonical	3	10	junction_2	4.89897948556636	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGTGAATCATTCACA	NA	False	NA	NA	False	NA	NA	NA	64768093	64752570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_64753667_64759324_64759493_64767442_64767499_64767855
tx.15174	chr5	+	4918	6	NNC	ENSMUSG00000029178.15	novel	298	4	NA	NA	-5458	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	263.203039496127	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	False	NA	NA	False	NA	NA	NA	64955272	64990244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
tx.15175	chr5	+	5087	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	134	0	-55	0	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	450	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	False	NA	NA	False	NA	NA	NA	64960864	64990244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
tx.15176	chr5	+	5165	7	NIC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	299.882615923853	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	False	NA	NA	False	NA	NA	NA	64960865	64990244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984146_64984226_64984452_64984614_64986319
tx.15177	chr5	+	1081	4	FSM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-55	0	-55	0	multi-exon	FALSE	canonical	3	600	junction_1	49.9266128098699	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGCTGTGGATGGC	NA	False	NA	NA	False	NA	NA	NA	64960864	64980452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221
tx.15178	chr5	+	4501	4	ISM	ENSMUSG00000029178.15	ENSMUST00000166409.6	1562	6	9755	-3419	-254	0	3prime_fragment	FALSE	canonical	3	286	junction_2	188.560040541173	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	9324	False	NA	NA	False	NA	NA	NA	64979436	64990244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_64979701_64980221_64980373_64984452_64984614_64986319
tx.15179	chr5	+	2899	14	FSM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	23	16	23	-16	multi-exon	FALSE	canonical	3	10	junction_1	7.03667484678724	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCCGTAAAGGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	65127436	65199213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65127488_65137050_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
tx.1518	chr10	-	6186	3	NIC	ENSMUSG00000057337.14	novel	6108	4	NA	NA	-230	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGTAGTGGTTATT	NA	False	NA	NA	False	NA	NA	NA	60055312	60017352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_60022706_60023894_60024141_60054725
tx.15180	chr5	+	3141	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	11	-3	11	3	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGTTAATATATTCT	NA	False	NA	NA	False	NA	NA	NA	65264892	65325452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
tx.15181	chr5	+	1681	4	ISM	ENSMUSG00000054920.13	ENSMUST00000204348.3	3380	10	30005	0	5011	0	3prime_fragment	FALSE	canonical	3	37	junction_3	1.69967317119759	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCCTTTATTTTAGCTG	NA	False	NA	NA	False	NA	NA	NA	65318423	65325485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_65318548_65320132_65320346_65321873_65322046_65324313
tx.15182	chr5	+	6279	36	FSM	ENSMUSG00000037890.14	ENSMUST00000203653.3	6279	36	2	-2	0	-1	multi-exon	FALSE	canonical	3	17	junction_26	8.32581429491851	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTAACATTTTCCTGGAT	8552	False	NA	NA	False	NA	NA	NA	65357040	65417751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446
tx.15183	chr5	+	4394	37	FSM	ENSMUSG00000037890.14	ENSMUST00000041892.13	4401	37	2	5	0	0	multi-exon	FALSE	canonical	3	17	junction_26	8.39311887467611	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAACATTTTCCTGGATTT	8554	False	NA	NA	False	NA	NA	NA	65357042	65417753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415572_65417456
tx.15184	chr5	+	4050	25	ISM	ENSMUSG00000037890.14	ENSMUST00000204647.3	3381	26	-10	-5	7	5	intron_retention	FALSE	canonical	3	27	junction_5	5.76974267671926	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGCCCCCTATAAATT	8561	False	NA	NA	False	NA	NA	NA	65357049	65401934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661
tx.15185	chr5	+	3385	26	FSM	ENSMUSG00000037890.14	ENSMUST00000204647.3	3381	26	1	-5	1	5	multi-exon	FALSE	canonical	3	27	junction_5	5.73606136647787	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGCCCCCTATAAATT	8572	False	NA	NA	False	NA	NA	NA	65357060	65401934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462
tx.15186	chr5	-	4725	25	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-24	-1	combination_of_known_junctions	FALSE	canonical	3	185	junction_1	102.558519880115	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	-1	True	NA	NA	False	NA	NA	NA	65492988	65419195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
tx.15187	chr5	-	4728	25	FSM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	-27	-749	-24	-1	multi-exon	FALSE	canonical	3	185	junction_1	103.759328563213	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	-1	True	NA	NA	False	NA	NA	NA	65492988	65419195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
tx.15188	chr5	-	4723	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	-24	0	-24	0	multi-exon	TRUE	canonical	3	281	junction_12	79.0184138174275	361	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	-1	True	NA	NA	False	NA	NA	NA	65492988	65419194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
tx.15189	chr5	-	4731	25	FSM	ENSMUSG00000029191.17	ENSMUST00000204965.3	4751	25	20	0	20	0	multi-exon	FALSE	canonical	3	270	junction_12	80.615847887097	400	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	NA	False	NA	NA	NA	65492993	65419194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
tx.1519	chr10	+	2620	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	30	-4	29	1	multi-exon	FALSE	canonical	3	864	junction_6	81.2601199887849	1612	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	7019	False	NA	NA	False	NA	NA	NA	60113478	60138377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
tx.15190	chr5	+	2432	4	NIC	ENSMUSG00000029195.11	novel	3540	5	NA	NA	23483	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	56.6058497173413	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	NA	False	NA	NA	NA	65529233	65541350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_65529554_65533022_65533292_65536270_65537415_65540651
tx.15191	chr5	+	2683	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23576	0	23482	0	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	160	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	NA	False	NA	NA	NA	65529232	65541350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
tx.15192	chr5	-	717	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	20	1	20	0	multi-exon	FALSE	canonical	3	5084	junction_7	3201.89202994551	867	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	65548767	65545707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
tx.15193	chr5	+	1599	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	53	16	6	-16	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATTTATTTTTATTT	6939	False	NA	NA	False	NA	NA	NA	65548892	65566534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
tx.15194	chr5	-	2455	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	95	0	95	0	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	619	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	NA	False	NA	NA	NA	65593197	65570563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
tx.15195	chr5	-	1148	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	452	2960	-67	0	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTTTAGAATCCAT	NA	False	NA	NA	False	NA	NA	NA	65650291	65607146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
tx.15196	chr5	+	1511	7	FSM	ENSMUSG00000029203.17	ENSMUST00000201292.4	1529	7	5	13	5	-13	multi-exon	FALSE	canonical	0	0	junction_2	633.60961079271	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCAGTGAATTTGACA	NA	False	NA	NA	False	NA	NA	NA	65694623	65753085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65694802_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
tx.15197	chr5	+	1602	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	52	3239	-6	-6	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	455	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATTTGACATTAATTT	NA	False	NA	NA	False	NA	NA	NA	65694627	65753092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
tx.15198	chr5	-	6939	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	38	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	602	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	2679	False	NA	NA	False	NA	NA	NA	65855578	65765120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
tx.15199	chr5	-	6631	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8400	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	99	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	NA	False	NA	NA	False	NA	NA	NA	65864016	65765119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
tx.1520	chr10	-	5189	5	ISM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	2098	2	2098	-2	3prime_fragment	FALSE	canonical	3	34	junction_2	4.81534007106456	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGGTTGGTGTCTCCA	NA	False	NA	NA	False	NA	NA	NA	60586463	60547852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_60552270_60556639_60556803_60559542_60559770_60566348_60566432_60586164
tx.15200	chr5	+	9144	20	NIC	ENSMUSG00000037795.15	novel	9055	20	NA	NA	-113	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	28.9209448779181	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	65920750	65987449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_65920934_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
tx.15201	chr5	+	8859	18	FSM	ENSMUSG00000037795.15	ENSMUST00000087264.4	5308	18	-95	-3456	46	-2	multi-exon	FALSE	canonical	3	26	junction_3	21.723490387184	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	65921367	65987449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
tx.15202	chr5	+	9268	21	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	50	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	30.7602015598078	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	NA	False	NA	NA	NA	65921371	65987450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
tx.15203	chr5	+	9183	20	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	45	-2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	25.0437843732546	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	65921366	65987449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
tx.15204	chr5	+	9305	20	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	27.6371422970797	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	65921340	65987449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943352_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
tx.15205	chr5	-	186	2	Antisense	novelGene_ENSMUSG00000106682.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	19	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGACAAGCCAGGGCTA	NA	False	NA	NA	False	NA	NA	NA	65961574	65931277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_-_65931415_65961525
tx.15206	chr5	+	9310	15	ISM	ENSMUSG00000037795.15	ENSMUST00000201489.4	9055	20	25692	1	6265	-1	3prime_fragment	FALSE	canonical	3	66	junction_1	14.8585164200226	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	NA	False	NA	NA	NA	65946555	65987450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
tx.15207	chr5	+	6566	10	ISM	ENSMUSG00000037795.15	ENSMUST00000201489.4	9055	20	43017	1	-3193	-1	3prime_fragment	FALSE	canonical	3	78	junction_3	12.7366487830285	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	8180	False	NA	NA	False	NA	NA	NA	65963880	65987450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
tx.15208	chr5	-	5108	7	NIC	ENSMUSG00000070780.12	novel	4703	7	NA	NA	-174	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	12.9282206389313	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAAGACTTTCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	66308840	66173898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308395
tx.15209	chr5	-	4901	7	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	148	-1	6	0	3prime_fragment	FALSE	canonical	3	18	junction_6	10.0235833025033	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAAGACTTTCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	66309119	66173898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308881
tx.1521	chr10	-	5270	6	FSM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	-30	0	-18	0	multi-exon	FALSE	canonical	3	34	junction_2	5.08330601085553	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTGGTGTCTCCATT	NA	False	NA	NA	False	NA	NA	NA	60588591	60547850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_60552270_60556639_60556803_60559542_60559770_60566348_60566432_60586164_60586464_60588512
tx.15210	chr5	-	4080	2	ISM	ENSMUSG00000029207.17	ENSMUST00000162955.8	4889	6	6104	17	6104	5	3prime_fragment	FALSE	canonical	3	113	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGGGAGGTTCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	66464967	66456062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_66460053_66464877
tx.15211	chr5	-	6549	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-23	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGTAATGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	66776047	66456070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
tx.15212	chr5	-	6494	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23587	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.8998836434113	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATCACCTTAGTAA	NA	False	NA	NA	False	NA	NA	NA	66752396	66456078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
tx.15214	chr5	-	6490	16	NIC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_11	22.2297098496584	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGTAATGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	66776048	66456070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
tx.15215	chr5	-	6523	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-78	-112	17	0	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGTAATGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	66776084	66456070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
tx.15216	chr5	-	6432	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23587	-7	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_15	19.4792196968975	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCACCTTAGTAAT	NA	False	NA	NA	False	NA	NA	NA	66752396	66456077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
tx.15217	chr5	-	6275	15	NIC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	-34	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	31.2267056036519	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCTTTGACTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	66776065	66456187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66700804_66700961_66775910
tx.15218	chr5	-	6207	15	NIC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	27.9249175541874	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	NA	False	NA	NA	NA	66776036	66456182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66775910
tx.15219	chr5	-	5823	16	FSM	ENSMUSG00000029207.17	ENSMUST00000162366.8	6540	16	56	661	-14	-546	multi-exon	FALSE	canonical	3	21	junction_4	23.9298976178336	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATACAACTGTTGG	NA	False	NA	NA	False	NA	NA	NA	66776045	66456728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
tx.1522	chr10	+	809	4	FSM	ENSMUSG00000020098.8	ENSMUST00000020298.8	789	4	-20	0	8	0	multi-exon	FALSE	canonical	3	60	junction_3	1.24721912892465	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGCTTCTAGAACCTTC	NA	False	NA	NA	False	NA	NA	NA	60925117	60930103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_60925196_60927842_60927975_60928382_60928464_60929585
tx.15220	chr5	+	1022	8	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.588113506231	86	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	66833582	66844574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_66833675_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
tx.15221	chr5	+	1361	7	FSM	ENSMUSG00000029223.13	ENSMUST00000176015.5	980	7	-379	-2	271	2	multi-exon	FALSE	canonical	3	449	junction_2	35.4479273802511	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	66833855	66844574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
tx.15222	chr5	+	2436	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	105	3706	19	1096	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACTGATTTCTAATG	NA	False	NA	NA	False	NA	NA	NA	67418012	67445098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
tx.15223	chr5	+	1901	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-22	3443	-21	1359	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATGTGTTTGTATTTC	NA	False	NA	NA	False	NA	NA	NA	67418017	67445361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
tx.15224	chr5	+	2461	7	FSM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	-3	3706	-3	1096	multi-exon	FALSE	canonical	3	385	junction_4	35.264476932649	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACTGATTTCTAATG	NA	False	NA	NA	False	NA	NA	NA	67418144	67445098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
tx.15225	chr5	+	3044	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	8	2659	-1	-2	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	200	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACGGTAGTTTTCAA	394	False	NA	NA	False	NA	NA	NA	67464305	67513127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
tx.15226	chr5	-	7878	5	FSM	ENSMUSG00000092060.5	ENSMUST00000169190.5	7935	5	54	3	54	-2	multi-exon	FALSE	canonical	3	28	junction_1	27.6710588883042	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTGACTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	67585088	67549492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584408
tx.15227	chr5	-	7818	5	NIC	ENSMUSG00000092060.5	novel	7935	5	NA	NA	43	-2	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	16.0682139642214	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTGACTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	67585099	67549492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408
tx.15228	chr5	-	8064	6	FSM	ENSMUSG00000092060.5	ENSMUST00000201972.2	8268	6	204	0	204	0	multi-exon	TRUE	canonical	3	28	junction_1	28.5839115587773	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	67585449	67549490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584408_67585136_67585312
tx.15229	chr5	-	8005	6	NIC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	192	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	22.3374125627835	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	67585461	67549490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67585136_67585312
tx.1523	chr10	-	4096	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	6	0	6	0	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	384	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	60983417	60934420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
tx.15230	chr5	-	7113	36	FSM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-62	1018	-1	3	multi-exon	TRUE	canonical	3	27	junction_2	10.9452813428194	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTTGCTGTGTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	68004775	67776500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
tx.15231	chr5	-	3761	26	ISM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-62	48216	-1	15786	5prime_fragment	FALSE	canonical	3	35	junction_4	11.0079244183452	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTGATGATGCAAATAT	NA	False	NA	NA	False	NA	NA	NA	68004775	67823698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
tx.15232	chr5	+	6730	15	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	3	-1334	intron_retention	FALSE	canonical	3	69	junction_8	26.4487374799954	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTATTGTTTTGACTG	NA	False	NA	NA	False	NA	NA	NA	69714298	69731982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
tx.15233	chr5	+	3688	14	NIC	ENSMUSG00000029208.17	novel	3091	15	NA	NA	3	6	intron_retention	FALSE	canonical	3	43	junction_8	32.5779901741495	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGTTCCTTCTCATT	NA	False	NA	NA	False	NA	NA	NA	69714298	69729080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
tx.15234	chr5	+	4975	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	-5	-1537	3	-1332	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTGTTTTGACTGCG	NA	False	NA	NA	False	NA	NA	NA	69714298	69731984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
tx.15235	chr5	+	3298	16	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	33.0987747339518	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATACTGGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	69714298	69730447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
tx.15236	chr5	+	4652	16	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	3	-1402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.1788335267677	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGGCTTAGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	69714298	69731914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_69714396_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
tx.15237	chr5	+	5150	4	FSM	ENSMUSG00000029208.17	ENSMUST00000125660.3	6321	4	-160	1331	-160	-1331	multi-exon	FALSE	canonical	3	151	junction_2	10.6144555520604	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTGTTTTGACTGCGT	NA	False	NA	NA	False	NA	NA	NA	69723906	69731985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_69725841_69726571_69726692_69728103_69728141_69728926
tx.15238	chr5	-	1845	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	49	0	-2	0	multi-exon	TRUE	canonical	3	104	junction_4	11.5998084275369	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATCTCATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	69749634	69732343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
tx.15239	chr5	-	3174	7	FSM	ENSMUSG00000029209.16	ENSMUST00000120789.8	1594	7	-7	-1573	-7	1	multi-exon	TRUE	canonical	0	0	junction_1	42.414620120897	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTGATTATTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	69749643	69732511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_69734785_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
tx.1524	chr10	-	4069	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	1	0	1	0	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	457	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	60983452	60934420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
tx.15240	chr5	-	1452	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	9	2434	9	2	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTGCTTGATTTCAG	NA	False	NA	NA	False	NA	NA	NA	72325523	72316351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
tx.15241	chr5	+	6069	23	FSM	ENSMUSG00000046808.18	ENSMUST00000126664.8	6052	23	-23	6	-23	-6	multi-exon	TRUE	canonical	3	78	junction_3	13.360930461982	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTGTCATTACTCCT	NA	False	NA	NA	False	NA	NA	NA	72360648	72456112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
tx.15242	chr5	-	3704	23	FSM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	8	0	8	0	multi-exon	FALSE	canonical	3	106	junction_22	12.1822421907212	252	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	NA	NA	NA	72717019	72670643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
tx.15243	chr5	+	4792	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	39	2	-26	-2	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	533	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTATCTTCCAAGTGT	NA	False	NA	NA	False	NA	NA	NA	73071685	73136170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
tx.15244	chr5	+	4849	9	FSM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	-3	-18	-3	0	multi-exon	FALSE	canonical	2	6	junction_7	103.604717556683	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATCTTCCAAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	73071708	73136172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73123146_73123225_73131873_73132190_73133339
tx.15245	chr5	-	7193	48	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	12.9553678938782	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGAGTCTTGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	73413965	73221698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
tx.15246	chr5	-	1918	13	ISM	ENSMUSG00000070733.14	ENSMUST00000101127.12	11340	63	-10	97888	-10	115	5prime_fragment	FALSE	canonical	3	41	junction_1	11.2875915155636	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAACCCTTCATGTAG	NA	False	NA	NA	False	NA	NA	NA	73413972	73275552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
tx.15247	chr5	+	1429	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTCATTCACATTTTT	NA	False	NA	NA	False	NA	NA	NA	73450146	73471285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
tx.15248	chr5	+	1383	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	12	128	-3	0	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	332	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	NA	False	NA	NA	NA	73450146	73471284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
tx.15249	chr5	-	2162	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	378	14	-56	0	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCAGAGCCAATACGCT	NA	False	NA	NA	False	NA	NA	NA	73495957	73479555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
tx.1525	chr10	-	4278	19	ISM	ENSMUSG00000059901.13	ENSMUST00000092486.11	5188	22	27389	2	27193	-2	3prime_fragment	FALSE	canonical	2	12	junction_8	3.8873012632302	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTGCCCTTGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	61081828	61032892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047448_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081704
tx.15250	chr5	+	4088	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	26	2	-8	-2	multi-exon	FALSE	canonical	3	110	junction_1	17.7721692542019	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTGTGGGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	73648401	73718131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
tx.15251	chr5	+	4170	12	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	50.51094309059	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGGGGTCTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	73648402	73718135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
tx.15252	chr5	+	4421	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	44.337907032245	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTGGGGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	73649955	73718133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_73650420_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
tx.15253	chr5	+	4073	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8215	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.4034881952397	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTGGGGTCTTTGT	8127	False	NA	NA	False	NA	NA	NA	73659995	73718133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
tx.15254	chr5	-	3084	8	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18580	-855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.3052497641136	37	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCTATATTACAAAGTA	NA	False	NA	NA	False	NA	NA	NA	73823713	73790946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
tx.15255	chr5	-	2878	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	53	855	53	-855	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCTATATTACAAAGTA	NA	False	NA	NA	False	NA	NA	NA	73805080	73790946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
tx.15256	chr5	-	4534	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	13	10	2	-10	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	226	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTAATTTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	74229079	74159396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
tx.15257	chr5	-	4465	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTATTTTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	74226403	74159392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
tx.15258	chr5	+	572	3	FSM	ENSMUSG00000106943.3	ENSMUST00000120364.2	575	3	3	0	3	0	multi-exon	FALSE	canonical	3	72	junction_1	23.5	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	74253740	74254998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_74253801_74254018_74254081_74254548
tx.15259	chr5	+	751	2	NIC	ENSMUSG00000106943.3	novel	575	3	NA	NA	36	0	intron_retention	FALSE	canonical	3	119	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	74253779	74254998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_74254081_74254548
tx.1526	chr10	-	5194	22	FSM	ENSMUSG00000059901.13	ENSMUST00000092486.11	5188	22	-6	0	-6	0	multi-exon	FALSE	canonical	2	7	junction_20	4.41446807041021	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCCCTTGGTGTTTTGT	4936	False	NA	NA	False	NA	NA	NA	61109223	61032890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047448_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081704_61081896_61085382_61085540_61106635_61107037_61108934
tx.15260	chr5	+	1838	4	FSM	ENSMUSG00000049907.9	ENSMUST00000051937.9	1812	4	-29	3	-29	-3	multi-exon	FALSE	canonical	2	8	junction_1	1.4142135623731	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATCTGACTGGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	74355917	74360139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_74356252_74356763_74356821_74357927_74358005_74358769
tx.15261	chr5	-	2392	9	FSM	ENSMUSG00000062110.15	ENSMUST00000072857.13	3672	9	7	1273	0	0	multi-exon	FALSE	canonical	3	48	junction_1	6.19979838381862	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCAAGCTGTCGCTAGC	NA	False	NA	NA	False	NA	NA	NA	74692403	74366749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_74367057_74372911_74373032_74385975_74386111_74397099_74397246_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
tx.15262	chr5	+	2204	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	4	52	combination_of_known_junctions	TRUE	canonical	3	110	junction_9	229.420784136424	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCTAAGAAAGTAATGT	NA	False	NA	NA	False	NA	NA	NA	74696135	74756858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.15263	chr5	+	4603	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	0	-2634	0	-11	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATATTAAGCAATGAAG	NA	False	NA	NA	False	NA	NA	NA	74696141	74759440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.15264	chr5	+	4641	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	28	4	-2	-4	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	243	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCAATGAAGTTTGGTC	NA	False	NA	NA	False	NA	NA	NA	74696137	74759447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.15265	chr5	+	4716	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	220	junction_12	176.742209428733	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCAATGAAGTTTGGTC	NA	False	NA	NA	False	NA	NA	NA	74696143	74759447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.15266	chr5	+	4051	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	6	712	-2	-702	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTAGTATTATTTTCTA	NA	False	NA	NA	False	NA	NA	NA	74696137	74758749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.15267	chr5	+	3998	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-2	-716	intron_retention	FALSE	canonical	3	110	junction_9	206.218767164378	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCAACAAAAGGACTT	NA	False	NA	NA	False	NA	NA	NA	74696137	74758735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.15268	chr5	+	4799	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	-19	intron_retention	FALSE	canonical	3	110	junction_9	215.964760499897	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTTGTGAAATATTAAG	NA	False	NA	NA	False	NA	NA	NA	74696141	74759432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.15269	chr5	+	3978	17	NIC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	0	-702	intron_retention	FALSE	canonical	3	110	junction_9	220.557452478374	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTAGTATTATTTTCTA	NA	False	NA	NA	False	NA	NA	NA	74696144	74758749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.1527	chr10	-	4092	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	138	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	86.6294407231168	339	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	NA	False	NA	NA	NA	61219171	61155438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
tx.15270	chr5	-	2614	11	FSM	ENSMUSG00000029228.16	ENSMUST00000117388.8	2564	11	-50	0	-50	0	multi-exon	FALSE	canonical	3	14	junction_9	3.95474398665704	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTAGAGGATTTCTT	NA	False	NA	NA	False	NA	NA	NA	74863623	74757764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452
tx.15271	chr5	-	2111	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	146	7442	146	5750	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	340	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAATTTATATACCT	NA	False	NA	NA	False	NA	NA	NA	75205289	75166090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
tx.15272	chr5	+	1664	2	FSM	ENSMUSG00000035946.8	ENSMUST00000040477.4	1665	2	-9	10	-9	-10	multi-exon	FALSE	canonical	3	51	junction_1	0	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCGTGGTACTTGTC	NA	False	NA	NA	False	NA	NA	NA	75236252	75238544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_75236999_75237626
tx.15273	chr5	+	5163	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	78	0	39	0	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	1679	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	805	False	NA	NA	False	NA	NA	NA	75735653	75817382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
tx.15274	chr5	+	1723	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	17	7	17	-7	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCACGCCCTGGACTGG	NA	False	NA	NA	False	NA	NA	NA	76288134	76303319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
tx.15275	chr5	+	1858	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	39	0	-31	0	multi-exon	FALSE	canonical	3	1062	junction_3	75.4808585006821	1229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	575	False	NA	NA	False	NA	NA	NA	76331765	76357092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
tx.15276	chr5	-	9761	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	25	-2308	25	-1	multi-exon	FALSE	canonical	3	18	junction_22	10.9767786450073	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACATTTTCCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	76452370	76357715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
tx.15277	chr5	-	7748	23	FSM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	19	1977	-1	332	multi-exon	FALSE	canonical	3	23	junction_22	10.4912399506674	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTAGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	76452620	76359691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
tx.15278	chr5	-	1146	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	24	11	1	-11	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACATTTTGTATGTGT	NA	False	NA	NA	False	NA	NA	NA	76478979	76459984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
tx.15279	chr5	+	3355	19	FSM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	8	8	-4	1	multi-exon	FALSE	canonical	3	86	junction_10	33.5248203611431	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGATAATATTCTTAA	NA	False	NA	NA	False	NA	NA	NA	76677165	76718133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
tx.1528	chr10	-	4140	20	FSM	ENSMUSG00000020092.10	ENSMUST00000020289.10	4282	20	138	4	138	-4	multi-exon	FALSE	canonical	3	320	junction_14	26.6759563689748	415	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	NA	False	NA	NA	NA	61219171	61155438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
tx.15280	chr5	+	3310	18	FSM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	-38	0	-3	0	multi-exon	FALSE	canonical	3	47	junction_10	35.7889816992977	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATAATATTCTTAAG	NA	False	NA	NA	False	NA	NA	NA	76677166	76718134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
tx.15281	chr5	+	6608	8	ISM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	24863	2	1575	0	3prime_fragment	FALSE	canonical	3	149	junction_3	15.4444362877024	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATAATATTCTTA	NA	False	NA	NA	False	NA	NA	NA	76702067	76718132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
tx.15282	chr5	+	5543	26	FSM	ENSMUSG00000036403.16	ENSMUST00000121979.8	5537	26	-6	0	-3	0	multi-exon	FALSE	canonical	3	24	junction_14	5.86433286913354	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGAAGGTCTTGTAGTAA	NA	False	NA	NA	False	NA	NA	NA	76736541	76794313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
tx.15283	chr5	-	3674	16	FSM	ENSMUSG00000055923.17	ENSMUST00000120963.8	3694	16	17	3	-5	2	multi-exon	FALSE	canonical	3	29	junction_15	18.6828501275605	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGTCTGTGGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	77053344	77023784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
tx.15284	chr5	-	3803	16	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_15	19.0349386363311	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTCTGTGGTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	77053320	77023783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053117
tx.15285	chr5	-	3729	17	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-4	-1	combination_of_known_junctions	TRUE	canonical	3	18	junction_16	23.6798305526032	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTGTGGTCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	77053343	77023782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
tx.15286	chr5	-	3574	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	352	55	-61	-55	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	932	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGCATCTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	77099073	77061177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
tx.15287	chr5	+	2048	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	435	-1	-35	1	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	2817	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTCTCGCTGTGTGGTCT	721	False	NA	NA	False	NA	NA	NA	77099588	77115353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
tx.15288	chr5	+	3595	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	25	5	1	-5	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	441	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTCGGTATTGGC	NA	False	NA	NA	False	NA	NA	NA	77122554	77147779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
tx.15289	chr5	-	1112	3	FSM	ENSMUSG00000059325.15	ENSMUST00000113453.9	1113	3	1	0	1	0	multi-exon	FALSE	canonical	3	24	junction_1	1.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGAGTCTTTTTTTTT	3144	False	NA	NA	False	NA	NA	NA	77243123	77234834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_77235664_77242712_77242870_77242997
tx.1529	chr10	+	1784	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	311	0	311	0	multi-exon	FALSE	canonical	3	289	junction_2	2.5	304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	61254061	61261117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_61254275_61258760_61259477_61260262
tx.15290	chr5	+	7044	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-40	0	-40	0	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	835	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	3656	False	NA	NA	False	NA	NA	NA	77413297	77434279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
tx.15291	chr5	+	7173	4	FSM	ENSMUSG00000029249.16	ENSMUST00000113449.2	6924	4	-249	0	-249	0	multi-exon	FALSE	canonical	3	119	junction_1	347.74543690592	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	4152	False	NA	NA	False	NA	NA	NA	77413793	77434279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549
tx.15292	chr5	-	2504	6	NIC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	-343	5	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	53.9013914477168	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATCTGTGACCAAG	NA	False	NA	NA	False	NA	NA	NA	77458274	77442023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_77442404_77444932_77445051_77447504_77447622_77454120_77454324_77455399_77455565_77456753
tx.15293	chr5	-	2629	7	FSM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	-339	-2	-339	2	multi-exon	FALSE	canonical	3	116	junction_4	16.2138486760204	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCATGTATCTGTGACC	NA	False	NA	NA	False	NA	NA	NA	77458270	77442026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
tx.15294	chr5	-	3890	3	FSM	ENSMUSG00000036285.11	ENSMUST00000150722.2	2815	3	-364	-711	-339	711	multi-exon	FALSE	canonical	3	159	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTATTATCCCAAGAACC	NA	False	NA	NA	False	NA	NA	NA	77458270	77452115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_77454324_77455399_77455565_77456753
tx.15295	chr5	+	3797	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	348	0	4	0	multi-exon	TRUE	canonical	3	372	junction_9	39.992360381564	717	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	77458341	77497171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
tx.15296	chr5	-	3166	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	31	-5	-1	5	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCTGTGGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	86213411	86159877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
tx.15297	chr5	-	4717	4	ISM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	52147	-903	51855	903	3prime_fragment	FALSE	canonical	3	117	junction_2	6.54896090146283	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGGTTTGTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	86268515	86256242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386
tx.15298	chr5	-	6316	30	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	7789	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.8047787962241	5	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTGAGTTGCAACTA	NA	False	NA	NA	False	NA	NA	NA	86312581	86257144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548
tx.15299	chr5	-	6553	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	232	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTCTTGAGTTGCAA	7116	False	NA	NA	False	NA	NA	NA	86320634	86257147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
tx.1530	chr10	+	1669	2	ISM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	4912	0	4912	0	3prime_fragment	FALSE	canonical	3	289	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	61258662	61261117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_61259477_61260262
tx.15300	chr5	+	3317	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	58.4142230393181	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	86952079	86984518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
tx.15301	chr5	+	3282	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	-13	0	-1	0	multi-exon	FALSE	canonical	3	145	junction_1	43.5918122329182	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	86952078	86984518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
tx.15302	chr5	+	3341	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_14	69.4558185225946	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	86952079	86984518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
tx.15303	chr5	+	1333	7	ISM	ENSMUSG00000029291.12	ENSMUST00000196894.5	3703	13	-39	14394	-39	10624	5prime_fragment	FALSE	canonical	3	106	junction_1	12.4454364683963	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATGATATGTATGCTT	NA	False	NA	NA	False	NA	NA	NA	88712859	88776160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883
tx.15304	chr5	+	3576	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	-41	1	-41	-1	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATTGTGTTGGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	88712857	88799250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
tx.15305	chr5	-	2121	9	ISM	ENSMUSG00000044221.15	ENSMUST00000113234.8	2286	10	1815	-5	1341	-5	3prime_fragment	FALSE	canonical	3	466	junction_8	37.9570069288926	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTTCTGTATATTTTC	NA	False	NA	NA	False	NA	NA	NA	88821710	88807311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551
tx.15306	chr5	-	2584	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-53	7	-53	3	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	750	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAAGTTCTGTATATTT	NA	False	NA	NA	False	NA	NA	NA	88824083	88807313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
tx.15307	chr5	+	6782	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	-8	-4069	8	-2162	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTTCGCATTAGTTT	NA	False	NA	NA	False	NA	NA	NA	88868721	88909917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
tx.15308	chr5	+	2895	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	179	4	179	-4	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	316	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTCTGAGACTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	88913033	88931136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
tx.15309	chr5	-	1330	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	-23	0	6	0	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	NA	False	NA	NA	NA	90371854	90362582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
tx.1531	chr10	-	5917	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-136	3	-136	-3	multi-exon	FALSE	canonical	3	200	junction_2	2.5	303	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGGTGGTGGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	61288576	61264272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_61269608_61270696_61270883_61288180
tx.15310	chr5	-	1328	6	FSM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	5	0	5	0	multi-exon	FALSE	canonical	3	158	junction_3	53.4714877294432	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	NA	False	NA	NA	NA	90371855	90362582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370191_90371474
tx.15311	chr5	-	4460	9	ISM	ENSMUSG00000055204.16	ENSMUST00000197021.2	8067	34	85882	-749	9462	-173	3prime_fragment	FALSE	canonical	3	118	junction_8	26.5020635988974	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAATATGTGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	90401720	90375850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353
tx.15312	chr5	-	3616	6	ISM	ENSMUSG00000055204.16	ENSMUST00000197021.2	8067	34	95421	-750	-4634	-172	3prime_fragment	FALSE	canonical	3	159	junction_3	16.7976188788769	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAATATGTGTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	90392181	90375849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722
tx.15313	chr5	-	9262	34	FSM	ENSMUSG00000055204.16	ENSMUST00000168058.7	9311	34	357	-308	21	-170	multi-exon	TRUE	canonical	1	20	junction_19	38.5954031243672	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGTGTCCTGCCCT	NA	False	NA	NA	False	NA	NA	NA	90514066	90375847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
tx.15314	chr5	-	9267	34	FSM	ENSMUSG00000055204.16	ENSMUST00000014421.15	10458	34	367	824	18	-171	multi-exon	FALSE	canonical	1	25	junction_19	38.1218865865083	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATATGTGTCCTGCCC	NA	False	NA	NA	False	NA	NA	NA	90514069	90375848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
tx.15315	chr5	-	8514	33	FSM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	18	-475	18	-171	multi-exon	FALSE	canonical	1	45	junction_32	30.9701847548574	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATATGTGTCCTGCCC	NA	False	NA	NA	False	NA	NA	NA	90514069	90375848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
tx.15316	chr5	-	7755	33	NIC	ENSMUSG00000055204.16	novel	9311	34	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	1	34	junction_19	34.2873741111433	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTTCTACTTGTATAT	NA	False	NA	NA	False	NA	NA	NA	90514063	90376598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
tx.15317	chr5	-	5951	26	NIC	ENSMUSG00000055204.16	novel	4938	27	NA	NA	21	-1	intron_retention	FALSE	canonical	1	25	junction_11	39.5180971201803	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGCTTCTCAAGAGACT	NA	False	NA	NA	False	NA	NA	NA	90514066	90400571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
tx.15318	chr5	-	5306	26	ISM	ENSMUSG00000055204.16	ENSMUST00000168058.7	9311	34	360	25055	-19	4	5prime_fragment	FALSE	canonical	1	20	junction_11	40.0918944426426	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCGTGATTGTTAAACT	NA	False	NA	NA	False	NA	NA	NA	90514063	90401210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
tx.15319	chr5	-	4563	25	ISM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	17	24887	17	4	5prime_fragment	FALSE	canonical	1	45	junction_24	31.0563723555873	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCGTGATTGTTAAACT	NA	False	NA	NA	False	NA	NA	NA	90514070	90401210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
tx.1532	chr10	+	3208	5	FSM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	8	0	8	0	multi-exon	FALSE	canonical	3	23	junction_1	4.84767985741633	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGTGCTTGGTGTCT	1782	False	NA	NA	False	NA	NA	NA	61311587	61418570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826_61383995_61415908
tx.15320	chr5	-	3845	24	ISM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	26	26293	-17	-1402	5prime_fragment	FALSE	canonical	1	45	junction_23	31.4708134356053	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAAGAAGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90514061	90402616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
tx.15321	chr5	+	4884	4	FSM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	33	151	33	-151	multi-exon	FALSE	canonical	2	9	junction_1	0.816496580927726	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGCTGTGGTGATTCA	NA	False	NA	NA	False	NA	NA	NA	91665506	91774602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_91665817_91741676_91742361_91760856_91760936_91770791
tx.15322	chr5	-	1900	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-32	99	-32	-2	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATACTGTTTTACAGAC	1303	False	NA	NA	False	NA	NA	NA	92110959	92096861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
tx.15323	chr5	+	3497	4	FSM	ENSMUSG00000102644.6	ENSMUST00000192174.6	1996	4	-20	-1481	-6	0	multi-exon	TRUE	canonical	3	9	junction_1	7.48331477354788	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGGGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	92110742	92119925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_92111382_92112954_92113164_92114310_92114434_92117399
tx.15324	chr5	+	2945	4	NNC	ENSMUSG00000102644.6	novel	1996	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	5.24933858267454	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGGGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	92110747	92119925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_92110835_92112954_92113164_92114310_92114434_92117399
tx.15325	chr5	+	3583	5	FSM	ENSMUSG00000102644.6	ENSMUST00000191860.2	3151	5	-432	0	-3	0	multi-exon	FALSE	canonical	2	3	junction_1	9.73075022801428	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGGGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	92110759	92119925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_92111382_92111541_92111645_92112954_92113164_92114310_92114434_92117399
tx.15326	chr5	-	3884	13	FSM	ENSMUSG00000029403.15	ENSMUST00000069937.11	3976	13	10	82	10	-82	multi-exon	FALSE	canonical	0	0	junction_1	2.51108652888656	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGCTTTAATTCATAT	NA	False	NA	NA	False	NA	NA	NA	92190890	92154014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92155994_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190657
tx.15327	chr5	-	4255	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	17	-1556	17	3	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATGTCCCTAATT	NA	False	NA	NA	False	NA	NA	NA	92231355	92200019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
tx.15328	chr5	-	4166	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	52	14	8	4	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	NA	False	NA	NA	NA	92231364	92200018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
tx.15329	chr5	-	4284	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-60	-2340	-1	4	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	778	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	NA	False	NA	NA	NA	92231577	92200018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
tx.1533	chr10	+	1354	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	10	0	10	0	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	2363	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2062	False	NA	NA	False	NA	NA	NA	61484340	61509947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
tx.15330	chr5	-	4185	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	1	-4	-1	4	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1705	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	NA	False	NA	NA	NA	92231577	92200018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
tx.15331	chr5	+	3911	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	-8	-5	-8	2	multi-exon	TRUE	canonical	0	0	junction_12	100.480471444838	920	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCATTGTTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	92285788	92350659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
tx.15332	chr5	-	2406	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	5	3	0	2	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTAAGGTCTGAGTGTCC	9203	False	NA	NA	False	NA	NA	NA	92426024	92405520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
tx.15333	chr5	-	4985	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	35	0	0	0	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	613	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGAAATCTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	92457848	92431868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
tx.15334	chr5	-	2270	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	77	5	-19	-5	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	635	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTCTGTCTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	92583001	92563403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
tx.15335	chr5	-	4710	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	-15	3	-15	-3	multi-exon	FALSE	canonical	3	99	junction_7	16.1496104397404	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCACTGTGAACTGT	NA	False	NA	NA	False	NA	NA	NA	92653511	92589175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
tx.15336	chr5	+	6433	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113054.9	6401	10	-30	-2	-30	2	multi-exon	FALSE	canonical	1	6	junction_1	38.4967531098403	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGAGATTTTTGCGGG	2150	False	NA	NA	False	NA	NA	NA	92957206	93113179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_92957421_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
tx.15337	chr5	+	6476	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	-27	-14	-27	4	multi-exon	FALSE	canonical	3	62	junction_1	24.0066863114075	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGATTTTTGCGGGTT	NA	False	NA	NA	False	NA	NA	NA	93045824	93113181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_93046080_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
tx.15338	chr5	+	4828	7	ISM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	43113	-14	2469	4	3prime_fragment	FALSE	canonical	3	112	junction_2	10.8730042868667	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGATTTTTGCGGGTT	NA	False	NA	NA	False	NA	NA	NA	93088964	93113181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
tx.15339	chr5	+	2335	5	ISM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	52876	-14	2984	4	3prime_fragment	FALSE	canonical	3	119	junction_4	9.75961064797157	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGATTTTTGCGGGTT	5204	False	NA	NA	False	NA	NA	NA	93098727	93113181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
tx.1534	chr10	+	2648	8	NIC	ENSMUSG00000020088.11	novel	897	8	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	573.138691054507	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCCTCTCTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	61516101	61529074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_61516193_61517877_61517928_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
tx.15340	chr5	+	5038	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	-10	0	-10	0	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	1152	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	93241285	93322817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
tx.15341	chr5	-	2851	8	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	182.803898498151	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGTTTGTGTAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	93354309	93329795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93351125_93351222_93353772
tx.15342	chr5	-	2755	7	FSM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	45	4	-22	-4	multi-exon	FALSE	canonical	3	340	junction_6	48.6052694902746	561	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGTTTGTGTAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	93354309	93329795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
tx.15343	chr5	-	5002	6	ISM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	43	1926	-24	-566	5prime_fragment	FALSE	canonical	3	340	junction_5	52.852246877498	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCTTCCCCATTATCC	NA	False	NA	NA	False	NA	NA	NA	93354311	93331717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
tx.15344	chr5	+	2646	7	FSM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	-73	-3	-73	2	multi-exon	FALSE	canonical	3	45	junction_2	9.62057979310787	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCCTATTTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	93416099	93424086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
tx.15345	chr5	+	2506	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	297	7	-35	0	multi-exon	FALSE	canonical	3	45	junction_3	8.90998064543581	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTCCTATTTCAGT	NA	False	NA	NA	False	NA	NA	NA	93415412	93424083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
tx.15346	chr5	-	6182	12	FSM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	-586	2968	-586	2275	multi-exon	FALSE	canonical	3	19	junction_9	8.72253659368072	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATATTGTGCTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	96310435	96221159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309795
tx.15347	chr5	-	5681	12	FSM	ENSMUSG00000034724.19	ENSMUST00000113005.9	3170	12	-76	-2435	40	2274	multi-exon	FALSE	canonical	3	6	junction_11	10.9800721068249	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAATATTGTGCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	96309690	96221160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309550
tx.15348	chr5	-	4766	5	ISM	ENSMUSG00000034724.19	ENSMUST00000036646.14	3314	12	70082	-2289	-4740	2276	3prime_fragment	FALSE	canonical	3	31	junction_1	5.04975246918104	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATATTGTGCTGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	96239532	96221158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442
tx.15349	chr5	+	3402	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	28	1	-1	-1	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	262	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTATCTTTATTCTAT	NA	False	NA	NA	False	NA	NA	NA	96358001	96414567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
tx.1535	chr10	+	2599	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	13	1	-7	-1	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	902	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCCTCTCTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61516101	61529075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
tx.15350	chr5	+	1621	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	-26	0	20	0	multi-exon	FALSE	canonical	0	0	junction_1	1.64991582276861	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGCTTCTGTTACTT	NA	False	NA	NA	False	NA	NA	NA	96941217	96993825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
tx.15351	chr5	+	3255	14	FSM	ENSMUSG00000034663.14	ENSMUST00000112974.6	3244	14	-9	-2	-9	2	multi-exon	TRUE	canonical	0	0	junction_13	5.94053371578702	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTATGGTATTTTTC	NA	False	NA	NA	False	NA	NA	NA	97145538	97217510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257
tx.15352	chr5	+	4309	16	FSM	ENSMUSG00000034663.14	ENSMUST00000035635.10	7387	16	7	3071	7	-3071	multi-exon	FALSE	canonical	0	0	junction_13	6.52856969191738	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAGAGAAATATCTGGC	NA	False	NA	NA	False	NA	NA	NA	97145554	97236655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
tx.15353	chr5	-	2308	7	FSM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-44	-7	-21	7	multi-exon	TRUE	canonical	3	15	junction_1	65.5709962983296	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTTGTTCTTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	97259476	97234831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_97236024_97243770_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
tx.15354	chr5	-	3682	6	NIC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	-7	2663	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	71.4047617459788	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGCCTGCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	97259462	97241127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_97243920_97245337_97245429_97247404_97247540_97251218_97251375_97256024_97256188_97259117
tx.15355	chr5	-	3755	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-40	6289	-17	2663	5prime_fragment	FALSE	canonical	3	151	junction_3	20.8096131631513	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGCCTGCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	97259472	97241127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
tx.15356	chr5	-	3405	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	19	0	19	0	multi-exon	FALSE	canonical	3	176	junction_1	0	288	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGTGAGTTAATAACAT	NA	False	NA	NA	False	NA	NA	NA	97540219	97530056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_97532729_97539486
tx.15357	chr5	-	4830	19	FSM	ENSMUSG00000029334.15	ENSMUST00000161490.8	4968	19	136	2	136	-2	multi-exon	FALSE	canonical	1	2	junction_7	5.01386965216377	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGTGTCAATGGTG	NA	False	NA	NA	False	NA	NA	NA	99185074	99077633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272_99091396_99095229_99095394_99114370_99114513_99115585_99115676_99117795_99117933_99119710_99119865_99120966_99121066_99124294_99124364_99127624_99127720_99128944_99129023_99136145_99136210_99140175_99140282_99142390_99142505_99145204_99145372_99172252_99172727_99184781
tx.15358	chr5	-	1344	8	ISM	ENSMUSG00000029334.15	ENSMUST00000031277.7	2618	19	12273	44434	12273	-28761	internal_fragment	FALSE	canonical	3	9	junction_1	4.09579176766613	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTTTGTTAGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	99172621	99124012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_99124364_99127624_99127720_99128944_99129023_99136145_99136210_99140175_99140282_99142390_99142505_99145204_99145372_99172252
tx.15359	chr5	-	1746	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-2	5067	-2	0	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	1595	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	NA	NA	NA	100126799	100108860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
tx.1536	chr10	+	2255	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	26	5	26	-5	multi-exon	FALSE	canonical	3	269	junction_1	6.12825877028341	451	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTCTGTCTGTTGGCTG	NA	False	NA	NA	False	NA	NA	NA	61531318	61538547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
tx.15360	chr5	-	1689	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	-23	4	-2	0	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	1172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	NA	NA	NA	100126799	100108860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
tx.15361	chr5	-	6149	7	ISM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	312	-2971	-15	2971	intron_retention	FALSE	canonical	3	572	junction_1	200.695803532499	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTGCTGTTTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	100186769	100178464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
tx.15362	chr5	-	2270	7	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	151	junction_2	333.583281289029	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	NA	False	NA	NA	NA	100186770	100181435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100182844_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.15363	chr5	-	3170	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-427	9	15	-9	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	100187508	100181444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.15364	chr5	-	3517	8	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-186	-9	combination_of_known_junctions	FALSE	canonical	3	110	junction_7	355.117974073693	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	100187709	100181444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
tx.15365	chr5	-	2358	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	-201	-8	-201	2	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTCAGGTACTGCATA	NA	False	NA	NA	False	NA	NA	NA	100187724	100182577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.15366	chr5	-	3188	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-17	-9	intron_retention	FALSE	canonical	3	230	junction_1	297.206243239284	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	100186771	100181444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.15367	chr5	-	4492	7	NIC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	-170	-137	intron_retention	FALSE	canonical	3	110	junction_6	363.263181300953	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGAATAGGAGGTCA	NA	False	NA	NA	False	NA	NA	NA	100187693	100181572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
tx.15368	chr5	-	5133	5	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-170	-373	intron_retention	FALSE	canonical	3	934	junction_2	102.524082536739	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCTTAGAGGTCTCT	NA	False	NA	NA	False	NA	NA	NA	100187693	100181808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
tx.15369	chr5	-	5243	6	ISM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-996	-1135	-201	-9	intron_retention	FALSE	canonical	3	934	junction_3	96.8949947107693	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	100187724	100181444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
tx.1537	chr10	+	3800	3	NIC	ENSMUSG00000020087.6	novel	2286	4	NA	NA	37	-4	intron_retention	FALSE	canonical	3	276	junction_2	4	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTCTGTTGGCTGC	NA	False	NA	NA	False	NA	NA	NA	61531329	61538548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_61534208_61535221_61535408_61537812
tx.15370	chr5	-	4645	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-182	-135	intron_retention	FALSE	canonical	3	934	junction_2	94.4681957062799	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGAATAGGAGGTCATT	NA	False	NA	NA	False	NA	NA	NA	100187705	100181570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.15371	chr5	-	2417	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-43	0	-17	0	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	NA	False	NA	NA	NA	100186771	100182579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.15372	chr5	-	3103	8	ISM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	-210	-6	-210	0	intron_retention	FALSE	canonical	3	230	junction_2	378.694696912153	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	NA	False	NA	NA	NA	100187733	100182579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
tx.15373	chr5	-	3015	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	-373	intron_retention	FALSE	canonical	3	151	junction_1	349.641759519655	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCTTAGAGGTCTCT	NA	False	NA	NA	False	NA	NA	NA	100186769	100181808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.15374	chr5	+	2704	6	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	-899	1	intron_retention	FALSE	canonical	3	76	junction_1	168.151122505917	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	NA	False	NA	NA	NA	100186944	100216620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_100188133_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
tx.15375	chr5	+	1455	7	FSM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	-35	0	24	0	multi-exon	FALSE	canonical	3	27	junction_6	172.72618021983	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	False	NA	NA	False	NA	NA	NA	100187867	100216619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657_100215801_100216154
tx.15376	chr5	+	2757	5	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	25	3	intron_retention	FALSE	canonical	3	76	junction_1	184.982431598247	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCATACAGACGTGTG	NA	False	NA	NA	False	NA	NA	NA	100187868	100216622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_100188133_100206998_100207101_100208832_100210135_100211617_100211742_100215657
tx.15377	chr5	+	1808	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	26	-1	26	1	multi-exon	FALSE	canonical	3	460	junction_1	20.2918702932973	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	NA	False	NA	NA	NA	100187869	100216620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
tx.15378	chr5	-	4301	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	51	junction_7	217.697988658871	63	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8089	False	NA	NA	False	NA	NA	NA	100564112	100509507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
tx.15379	chr5	-	4200	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	466	junction_5	100.698448422967	791	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8097	False	NA	NA	False	NA	NA	NA	100564104	100509507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
tx.1538	chr10	+	1462	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	50	0	2	0	multi-exon	FALSE	canonical	3	49	junction_9	38.6497408676411	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	61551091	61574432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
tx.15380	chr5	-	4154	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	2	163	junction_5	145.633410441033	240	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8098	False	NA	NA	False	NA	NA	NA	100564103	100509507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
tx.15381	chr5	-	4120	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	64	junction_13	176.439469507251	57	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8098	False	NA	NA	False	NA	NA	NA	100564103	100509508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
tx.15382	chr5	-	614	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	19	-7	0	7	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTTGTGTTTTATTGA	NA	False	NA	NA	False	NA	NA	NA	100577375	100568693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
tx.15383	chr5	-	4474	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-15	-8	-15	8	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	314	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	100648508	100589891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
tx.15384	chr5	+	1623	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	126	6	-8	-6	multi-exon	FALSE	canonical	3	1193	junction_9	105.134834062424	568	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTGAGGTGTTCTATT	5399	False	NA	NA	False	NA	NA	NA	100666300	100695663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
tx.15385	chr5	-	5220	5	ISM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	6643	0	-3222	0	3prime_fragment	FALSE	canonical	3	317	junction_3	17.5979402203781	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	5445	False	NA	NA	False	NA	NA	NA	100815507	100802588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445
tx.15386	chr5	-	1535	6	NIC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_5	105.678758508983	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	NA	False	NA	NA	NA	100822109	100802588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100821854
tx.15387	chr5	-	1717	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	26	0	-9	0	multi-exon	FALSE	canonical	3	222	junction_5	48.3206880009887	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	NA	False	NA	NA	NA	100822124	100802588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
tx.15388	chr5	-	3107	12	FSM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	8	2	-3	-2	multi-exon	FALSE	canonical	2	11	junction_7	2.99862227317648	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCATGGTCATTCTTC	NA	False	NA	NA	False	NA	NA	NA	100867574	100827351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100828897_100832845_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100846778_100846953_100856522_100856649_100859194_100859341_100867257
tx.15389	chr5	-	2972	2	FSM	ENSMUSG00000035266.17	ENSMUST00000139203.2	984	2	-1988	0	-613	0	multi-exon	FALSE	canonical	3	93	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	1254	False	NA	NA	False	NA	NA	NA	100915292	100910016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100910503_100912806
tx.1539	chr10	+	3106	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-14	-6	-2	0	multi-exon	FALSE	canonical	3	116	junction_1	25.5706741209535	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	61551087	61574432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
tx.15390	chr5	-	3682	18	FSM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	1	6	1	0	multi-exon	FALSE	canonical	3	40	junction_16	11.2714232774287	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	NA	False	NA	NA	NA	100946463	100910016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
tx.15391	chr5	+	517	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	117	4	1	-1	multi-exon	FALSE	canonical	3	1615	junction_5	130.796636042369	223	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTGAGTGGAAATGTC	NA	False	NA	NA	False	NA	NA	NA	100946609	100952333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
tx.15392	chr5	-	1677	10	FSM	ENSMUSG00000035234.19	ENSMUST00000200657.5	1668	10	-12	3	-5	-3	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTAATATCTTATT	NA	False	NA	NA	False	NA	NA	NA	100968818	100953060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
tx.15393	chr5	-	2125	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	11	3	-7	-3	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTAATATCTTATT	NA	False	NA	NA	False	NA	NA	NA	100968820	100953060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
tx.15394	chr5	-	2108	9	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	-7	-3	intron_retention	TRUE	canonical	3	24	junction_6	55.1507876190359	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTAATATCTTATT	NA	False	NA	NA	False	NA	NA	NA	100968820	100953060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100965827_100965865_100966382_100966474_100968696
tx.15395	chr5	-	4010	3	FSM	ENSMUSG00000035234.19_ENSMUSG00000105607.2	ENSMUST00000145707.2	454	3	-1	-3555	-1	12	multi-exon	FALSE	canonical	3	160	junction_1	27	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	100968814	100962063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_100965865_100966382_100966474_100968696
tx.15396	chr5	+	2932	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	-48	0	41	0	multi-exon	FALSE	canonical	3	20	junction_3	3.86939558874797	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGCATTATTCTTC	NA	False	NA	NA	False	NA	NA	NA	100994036	101046965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
tx.15397	chr5	+	2921	12	FSM	ENSMUSG00000029314.15	ENSMUST00000092990.4	3035	12	111	3	58	0	multi-exon	FALSE	canonical	3	20	junction_2	3.94172425248705	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGCATTATTCTTC	NA	False	NA	NA	False	NA	NA	NA	100994340	101046965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
tx.15398	chr5	+	3873	12	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	-38	-6	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	15.7096590806342	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGACTTTGCGCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	101912957	101971718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
tx.15399	chr5	+	3969	13	FSM	ENSMUSG00000029330.9	ENSMUST00000031273.9	3924	13	-48	3	-48	-3	multi-exon	TRUE	canonical	3	31	junction_6	11.4561361529774	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGCGCTGCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	101912947	101971721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101956531_101956615_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
tx.1540	chr10	+	668	5	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-20	10336	-8	390	5prime_fragment	FALSE	canonical	3	116	junction_1	28.6050694807756	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTTGTTTGATTGTTT	NA	False	NA	NA	False	NA	NA	NA	61551081	61564090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907
tx.15400	chr5	+	3732	10	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	17.1399468429099	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGCTGCTGTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	101912947	101971724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101962265_101962419_101963714_101963835_101965718_101965823_101969299
tx.15401	chr5	-	4756	8	FSM	ENSMUSG00000043940.16	ENSMUST00000173955.2	2713	8	-62	-1981	-62	0	multi-exon	FALSE	canonical	3	14	junction_1	6.29544701043734	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAAGTTGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	101999441	101980821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105
tx.15402	chr5	-	4868	9	ISM	ENSMUSG00000043940.16	ENSMUST00000174598.8	10581	65	129047	-3202	-998	0	intron_retention	FALSE	canonical	3	14	junction_1	5.88960949469487	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAAGTTGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	102000377	101980821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088
tx.15403	chr5	+	3675	3	FSM	ENSMUSG00000092354.8	ENSMUST00000174864.2	787	3	-44	-2844	-8	674	multi-exon	FALSE	canonical	3	40	junction_1	52	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	NA	NA	NA	101985273	101994950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_101985425_101989616_101989940_101991749
tx.15404	chr5	+	5464	2	ISM	ENSMUSG00000092354.8	ENSMUST00000174312.2	619	3	-53	-2752	-53	674	intron_retention	FALSE	canonical	3	132	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	NA	NA	NA	101987967	101994950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_101988098_101989616
tx.15405	chr5	+	3631	3	NIC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-53	651	intron_retention	FALSE	canonical	3	132	junction_1	6	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCTAATAAATACATGAAAT	NA	False	NA	NA	False	NA	NA	NA	101987967	101994927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_101988098_101989616_101989940_101991749
tx.15406	chr5	-	5729	15	NNC	ENSMUSG00000043940.16	novel	10581	65	NA	NA	-10439	-4748	intron_retention	FALSE	canonical	2	4	junction_14	7.24780051083761	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGAAGCTAAGCAATTTA	8573	False	NA	NA	False	NA	NA	NA	102009818	101988771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102009440
tx.15407	chr5	+	8286	48	FSM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-324	-47	-15	47	multi-exon	FALSE	canonical	1	2	junction_41	13.2327768430788	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAACCAATTCAGACAT	NA	False	NA	NA	False	NA	NA	NA	103573042	103746216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
tx.15408	chr5	+	6750	41	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-314	15434	-5	-15434	5prime_fragment	FALSE	canonical	2	11	junction_18	12.6273265183094	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAAGTCCTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	103573052	103730735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
tx.15409	chr5	+	3447	18	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-314	56869	-5	0	5prime_fragment	FALSE	canonical	3	18	junction_6	10.5656622127096	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	103573052	103689300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
tx.1541	chr10	+	1444	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	-1	-1	-1	1	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGATCCTCCTCCTTCGC	NA	False	NA	NA	False	NA	NA	NA	61551088	61575040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
tx.15410	chr5	+	6180	38	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	2	-15430	combination_of_known_splicesites	FALSE	canonical	3	9	junction_17	12.7567567567568	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCTGTTGTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	103573059	103730739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
tx.15411	chr5	+	2901	17	NIC	ENSMUSG00000034573.15	novel	3439	18	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	12.8403660383963	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	103573052	103689300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
tx.15412	chr5	+	7695	47	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-16	49	combination_of_known_splicesites	FALSE	canonical	1	2	junction_40	13.674241372985	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACCAATTCAGACATCC	NA	False	NA	NA	False	NA	NA	NA	103573089	103746218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
tx.15413	chr5	+	8408	21	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	28.5472853350367	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	False	NA	NA	False	NA	NA	NA	103840250	104003182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
tx.15414	chr5	+	8586	20	FSM	ENSMUSG00000029313.19	ENSMUST00000054979.10	8323	20	-265	2	-265	-2	multi-exon	FALSE	canonical	2	26	junction_1	65.0524612499899	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGAGCCTGTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	103901762	104003186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_103902212_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
tx.15415	chr5	+	6633	10	ISM	ENSMUSG00000029313.19	ENSMUST00000031256.6	8312	20	78942	5	49156	-5	3prime_fragment	FALSE	canonical	3	249	junction_2	26.2466929133727	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTGAGCCTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	103981380	104003183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
tx.15416	chr5	-	3221	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	15	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.6851808644853	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	104059110	104009934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058919
tx.15417	chr5	-	3173	10	FSM	ENSMUSG00000029312.13	ENSMUST00000031254.9	3193	10	1	19	1	11	multi-exon	FALSE	canonical	3	103	junction_9	11.7473401244707	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	104059124	104009934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
tx.15418	chr5	+	1503	8	NIC	ENSMUSG00000029310.14	novel	995	6	NA	NA	10	-10	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	99.0728447730687	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGACTTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	104194401	104213235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
tx.15419	chr5	+	1468	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	10	10	10	-10	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGACTTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	104194744	104213235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
tx.1542	chr10	-	1989	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	207	-21	207	21	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	355	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCCCTTTATTGCGATA	NA	False	NA	NA	False	NA	NA	NA	61619719	61574422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
tx.15420	chr5	+	1405	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	5	0	2	0	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	3685	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	NA	False	NA	NA	NA	104582988	104588916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
tx.15421	chr5	+	5116	15	FSM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	103	0	-17	0	multi-exon	FALSE	canonical	3	58	junction_14	9.78049913170622	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGTGTTAAAAACACGT	NA	False	NA	NA	False	NA	NA	NA	104607418	104653685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
tx.15422	chr5	+	2203	6	ISM	ENSMUSG00000034462.10	ENSMUST00000130931.2	2282	9	-23	6496	-23	-6496	5prime_fragment	FALSE	canonical	3	61	junction_1	8.79545337091841	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104607412	104631690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890
tx.15423	chr5	+	4947	14	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	20.2464110341392	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGTGTTAAAAACACGT	NA	False	NA	NA	False	NA	NA	NA	104607419	104653685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
tx.15424	chr5	+	6797	6	ISM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	31665	0	-1656	0	3prime_fragment	FALSE	canonical	3	58	junction_5	9.20869154657707	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGTGTTAAAAACACGT	NA	False	NA	NA	False	NA	NA	NA	104638980	104653685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
tx.15425	chr5	+	7672	7	ISM	ENSMUSG00000097392.5	ENSMUST00000239420.2	9445	8	10620	4	-4707	-4	3prime_fragment	FALSE	canonical	1	3	junction_3	5.43905629069357	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACAGCTTGGTTCTTT	4493	False	NA	NA	False	NA	NA	NA	104666835	104702069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_104670591_104671982_104672015_104672124_104672292_104673683_104673839_104686691_104686840_104689031_104689129_104698751
tx.15426	chr5	+	2707	3	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_2	30.5	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTTGAATTAC	NA	False	NA	NA	False	NA	NA	NA	104719526	104732486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_104719638_104728353_104728481_104730017
tx.15427	chr5	+	2758	4	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_1	10.4243305140746	181	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTTGAATTAC	NA	False	NA	NA	False	NA	NA	NA	104719536	104732486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_104719638_104728353_104728481_104728722_104728784_104730017
tx.15428	chr5	-	2845	5	FSM	ENSMUSG00000072774.11	ENSMUST00000186219.7	2904	5	61	-2	61	2	multi-exon	FALSE	canonical	3	35	junction_4	90.557647385519	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGAATTGTGCGTTTG	NA	False	NA	NA	False	NA	NA	NA	105007875	104961032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
tx.15429	chr5	-	2800	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	61	2	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGAATTGTGCGTTTG	NA	False	NA	NA	False	NA	NA	NA	105007875	104961032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
tx.1543	chr10	+	1703	4	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	26.9608770051883	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTGTCTCTTCACAGC	NA	False	NA	NA	False	NA	NA	NA	61670289	61711030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_+_61670501_61698165_61698280_61709460_61709561_61709752
tx.15430	chr5	+	6743	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	-26	9	-26	-9	multi-exon	FALSE	canonical	3	31	junction_1	5.11737237261468	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAGAATCTGATTGGCC	3342	False	NA	NA	False	NA	NA	NA	105563614	105637931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
tx.15431	chr5	+	5421	2	ISM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	64994	11	64994	-11	3prime_fragment	FALSE	canonical	3	44	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTAGAATCTGATTGG	7593	False	NA	NA	False	NA	NA	NA	105628634	105637929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_105629795_105633668
tx.15432	chr5	+	3038	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	-122	4060	-122	2086	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAAAGTTTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	105667131	105756824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
tx.15433	chr5	+	2693	3	NNC	ENSMUSG00000054720.13	novel	6976	4	NA	NA	-13499	2085	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	10.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAAAGTTTTATTTG	8871	False	NA	NA	False	NA	NA	NA	105693224	105756823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_105693317_105727333_105727476_105754364
tx.15434	chr5	+	3924	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	-9	8	-9	-3	multi-exon	FALSE	canonical	3	145	junction_1	205.5	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4062	False	NA	NA	False	NA	NA	NA	105847825	105963073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_105848121_105880095_105880241_105959589
tx.15435	chr5	+	4034	3	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	190	-3	intron_retention	FALSE	canonical	3	23	junction_1	266.5	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4261	False	NA	NA	False	NA	NA	NA	105848024	105963073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_105848430_105880095_105880241_105959589
tx.15436	chr5	+	3858	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	68	3	-9	-3	multi-exon	FALSE	canonical	3	312	junction_1	122	443	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4959	False	NA	NA	False	NA	NA	NA	105848722	105963073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_105848952_105880095_105880241_105959589
tx.15437	chr5	+	2685	12	FSM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	-21	3	-18	-3	multi-exon	TRUE	canonical	3	25	junction_1	8.12708968677346	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTGTTCTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	106024412	106063681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
tx.15438	chr5	-	5776	6	FSM	ENSMUSG00000049606.17	ENSMUST00000112696.8	5785	6	6	3	2	0	multi-exon	FALSE	canonical	3	25	junction_5	33.3742415644161	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	NA	False	NA	NA	NA	106844690	106764607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844397
tx.15439	chr5	-	5930	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	7	junction_6	44.4100213915733	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTCTAATGTGAAACA	NA	False	NA	NA	False	NA	NA	NA	106844051	106764605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843508_106843566_106843663
tx.1544	chr10	-	1118	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142796.8	1135	3	15	2	15	0	multi-exon	FALSE	canonical	3	38	junction_2	41.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCGGTGAATGACTG	NA	False	NA	NA	False	NA	NA	NA	61946814	61943990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_61944903_61945662_61945792_61946737
tx.15440	chr5	-	4793	4	ISM	ENSMUSG00000049606.17	ENSMUST00000045466.14	5569	7	57970	0	-13615	0	intron_retention	FALSE	canonical	3	98	junction_3	9.53356643071673	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	106785871	106764606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475
tx.15441	chr5	-	5066	5	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-69	0	intron_retention	FALSE	canonical	3	25	junction_4	36.9188298839495	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	106844585	106764606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106844397
tx.15442	chr5	-	5704	5	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	15	junction_4	41.2492424172857	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	NA	False	NA	NA	NA	106844679	106764607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106844397
tx.15443	chr5	-	3887	3	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-13316	0	intron_retention	FALSE	canonical	3	41	junction_2	40	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	NA	False	NA	NA	NA	106785572	106764607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_106766295_106767405_106767509_106783475
tx.15444	chr5	+	2925	12	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	76.50290331011	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	107112202	107132298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127181_107127311_107130829
tx.15445	chr5	+	4304	10	NIC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-28	6	intron_retention	FALSE	canonical	3	232	junction_7	20.9290394275042	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTATTTAAAGAGTAA	NA	False	NA	NA	False	NA	NA	NA	107112218	107132304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124495_107124579_107127160_107127311_107130829
tx.15446	chr5	+	2937	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	26	-2	26	2	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATACTTATTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	107112213	107132300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
tx.15447	chr5	+	2835	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	34	-5	-25	4	multi-exon	FALSE	canonical	3	29	junction_7	74.2377262582846	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATACTTATTTAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	107112221	107132302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
tx.15448	chr5	-	6086	17	FSM	ENSMUSG00000029287.15	ENSMUST00000031224.15	6087	17	1	0	1	0	multi-exon	FALSE	canonical	3	17	junction_8	3.80788655293195	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCATATCTGGTCAT	278	False	NA	NA	False	NA	NA	NA	107437494	107254435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_107257624_107266284_107266393_107269225_107269274_107278326_107278445_107280598_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758_107362944_107414059_107414217_107437120
tx.15449	chr5	+	6670	17	ISM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-82	-103	-82	103	intron_retention	FALSE	canonical	2	10	junction_13	5.58142846859117	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGATGGAGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	107585780	107658790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
tx.1545	chr10	-	1766	3	FSM	ENSMUSG00000020083.14	ENSMUST00000141144.2	594	3	-462	-710	10	0	multi-exon	FALSE	canonical	3	121	junction_1	1.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	False	NA	NA	False	NA	NA	NA	61946737	61943988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_61944903_61945662_61945792_61946014
tx.15450	chr5	+	5726	18	FSM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-80	-390	-80	4	multi-exon	FALSE	canonical	2	4	junction_17	6.08645896223428	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAATCAGTCTGTGAATA	NA	False	NA	NA	False	NA	NA	NA	107585782	107659077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741_107656989_107658217
tx.15451	chr5	-	2031	19	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	56.5136550744733	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATTGCATAATTCTT	NA	False	NA	NA	False	NA	NA	NA	107745499	107696834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745409
tx.15452	chr5	-	1994	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	13	8	13	-6	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACTAGAAAAATTGCATA	NA	False	NA	NA	False	NA	NA	NA	107745492	107696840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
tx.15453	chr5	+	2284	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	-14	-2	0	2	multi-exon	FALSE	canonical	3	138	junction_1	12.1951720866178	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCAGAAGCTGACATT	NA	False	NA	NA	False	NA	NA	NA	107745586	107809706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
tx.15454	chr5	-	6101	19	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	40	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	51.3541624408382	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	NA	False	NA	NA	NA	108016994	107892660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
tx.15455	chr5	-	6233	20	NIC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	53	-2	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	109	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTATGTCCTTAGATTA	NA	False	NA	NA	False	NA	NA	NA	108016981	107892662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
tx.15456	chr5	-	6055	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	149	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	NA	False	NA	NA	NA	108016981	107892660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
tx.15457	chr5	+	1055	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	36	954	-34	1	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	1177	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGTGTTAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	108048403	108055917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
tx.15458	chr5	-	1807	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	4	910	4	740	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTACTGTGTACTTA	NA	False	NA	NA	False	NA	NA	NA	108134947	108056828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
tx.15459	chr5	+	4039	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	2	intron_retention	FALSE	canonical	0	0	junction_3	680.408158550603	33	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	108208606	108256872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.1546	chr10	-	1182	4	FSM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	32	555	-5	0	multi-exon	FALSE	canonical	3	105	junction_3	8.33999733546454	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	False	NA	NA	False	NA	NA	NA	61946797	61943988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_61944903_61945662_61945792_61946014_61946094_61946737
tx.15460	chr5	+	4021	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4936	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	677.031441908966	25	2	1	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	108208603	108256866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_108208730_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.15461	chr5	+	4107	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	0	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	220	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	108208606	108256870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.15462	chr5	+	3875	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	125	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	108208606	108256871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.15463	chr5	+	3960	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	1	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1195	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	108208606	108256871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.15464	chr5	+	4271	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_4	643.731503725652	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	108213544	108256870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.15465	chr5	+	4088	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	-28	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	108213579	108256870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.15466	chr5	+	4439	17	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_5	694.135253390865	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	108213578	108256870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.15467	chr5	+	4289	16	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	677.372492306363	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	108213580	108256870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_108213832_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.15468	chr5	-	3789	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	4	7	4	-7	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	225	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTATCATAATTGTTAC	NA	False	NA	NA	False	NA	NA	NA	108280482	108269499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
tx.15469	chr5	+	3589	4	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-105	91631	-66	2422	intron_retention	FALSE	canonical	2	80	junction_2	5.90668171555645	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTCTGTGTTCTGTGA	1038	False	NA	NA	False	NA	NA	NA	108280674	108289863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779
tx.1547	chr10	-	1683	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	-5	1960	-5	353	multi-exon	TRUE	canonical	3	242	junction_7	11.6303613925986	278	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTGTTTGGAAGTC	4871	False	NA	NA	False	NA	NA	NA	62067035	62023134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
tx.15470	chr5	+	4721	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-93	708	-54	-708	multi-exon	FALSE	canonical	2	47	junction_16	11.5130804048336	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAATTTATTGATTAT	1050	False	NA	NA	False	NA	NA	NA	108280686	108380786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
tx.15471	chr5	+	3077	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	8	0	8	0	multi-exon	FALSE	canonical	3	201	junction_1	9	209	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTATATTTAATGAT	NA	False	NA	NA	False	NA	NA	NA	108416770	108428392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108417676_108423434_108423599_108426384
tx.15472	chr5	+	3009	11	ISM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	192	6940	165	-5818	5prime_fragment	FALSE	canonical	3	51	junction_6	9.76165969494942	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	108460666	108490281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660
tx.15473	chr5	+	4370	13	FSM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	204	-1	177	1	multi-exon	TRUE	canonical	3	51	junction_6	9.64761052742537	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTGTCTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	108460678	108497222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
tx.15474	chr5	-	304	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	58	9	7	-7	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	310	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGGCTTCCTCTCTCT	5560	False	NA	NA	False	NA	NA	NA	108582256	108581118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
tx.15475	chr5	+	5057	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	26	2625	26	-2625	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCTCCCAGTCTGGCA	NA	False	NA	NA	False	NA	NA	NA	108609123	108652217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
tx.15476	chr5	-	2132	4	FSM	ENSMUSG00000033615.10	ENSMUST00000046892.10	2189	4	51	6	27	-6	multi-exon	FALSE	canonical	3	7	junction_1	1.4142135623731	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGTGGCTATTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	108697839	108666425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_108668193_108673257_108673434_108696371_108696476_108697754
tx.15477	chr5	-	4464	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	-11	0	5	0	multi-exon	FALSE	canonical	3	318	junction_10	27.4864725426801	437	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	NA	False	NA	NA	NA	108777616	108717279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
tx.15478	chr5	+	3699	10	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-181	-561	-4	-31	intron_retention	FALSE	canonical	3	25	junction_1	34.906223577529	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATGAAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	108777693	108795098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
tx.15479	chr5	+	2453	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-22	1525	-22	-6	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTTCTTTTGAACAT	NA	False	NA	NA	False	NA	NA	NA	108777675	108795123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
tx.1548	chr10	-	3663	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	366	249	366	0	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	1112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	62175955	62104882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
tx.15480	chr5	+	1457	10	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-34	3679	28	-13	5prime_fragment	FALSE	canonical	3	99	junction_1	13.0251418797514	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGCATCTGACACTACA	NA	False	NA	NA	False	NA	NA	NA	108777663	108792969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
tx.15481	chr5	+	2560	11	FSM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-163	-586	14	-6	multi-exon	FALSE	canonical	3	25	junction_1	36.4367945900843	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTTCTTTTGAACAT	NA	False	NA	NA	False	NA	NA	NA	108777711	108795123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
tx.15482	chr5	-	4578	23	FSM	ENSMUSG00000004815.13	ENSMUST00000053913.13	4938	23	7	353	7	1	multi-exon	FALSE	canonical	3	33	junction_4	9.2499720794754	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	108808670	108794911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
tx.15483	chr5	+	3192	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	179	2	-10	-2	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGGCCTCCCAAGTCT	NA	False	NA	NA	False	NA	NA	NA	108817150	108832421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
tx.15484	chr5	+	2538	7	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	-27	25	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	30.2402417685809	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTGTTTTTACCTGG	NA	False	NA	NA	False	NA	NA	NA	108842068	108854815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
tx.15485	chr5	+	2682	7	FSM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	-302	-51	-30	23	multi-exon	FALSE	canonical	3	66	junction_1	17.0171482138851	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGGTGTTTTTACCT	NA	False	NA	NA	False	NA	NA	NA	108842065	108854813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_108842399_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
tx.15486	chr5	+	2450	6	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	-20	25	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	43.0041858427758	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTGTTTTTACCTGG	NA	False	NA	NA	False	NA	NA	NA	108842075	108854815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_108842399_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
tx.15487	chr5	+	2962	6	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	16	25	intron_retention	FALSE	canonical	3	93	junction_1	8.84081444212014	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTGTTTTTACCTGG	NA	False	NA	NA	False	NA	NA	NA	108842149	108854815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
tx.15488	chr5	+	2228	5	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	7.82623792124926	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	109614940	109627432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_109615053_109618707_109618865_109624129_109624257_109624444_109624506_109625661
tx.15489	chr5	+	2088	4	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	8.25967446224258	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	109614923	109627432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_109615053_109624129_109624257_109624444_109624506_109625661
tx.1549	chr10	-	2463	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	14	127	14	4	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	351	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTATCTGGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	62285503	62265114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
tx.15490	chr5	-	515	3	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	899	-6	899	0	3prime_fragment	FALSE	canonical	3	516	junction_2	49.5	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109703440	109702574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_109702937_109703138_109703224_109703372
tx.15491	chr5	-	667	2	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	896	-6	896	0	intron_retention	FALSE	canonical	3	615	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109703443	109702574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_109702937_109703138
tx.15492	chr5	-	1058	5	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	2188	2	-275	2	3prime_fragment	FALSE	canonical	1	50	junction_4	239.958720408324	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGGCCAGCCATCATTA	NA	False	NA	NA	False	NA	NA	NA	109704614	109702576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285
tx.15493	chr5	-	1268	7	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	1192	0	1192	0	3prime_fragment	FALSE	canonical	1	48	junction_6	234.65719677862	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109705610	109702574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383
tx.15494	chr5	-	1454	8	FSM	ENSMUSG00000033467.13	ENSMUST00000044579.12	1323	8	-127	-4	-127	0	multi-exon	FALSE	canonical	1	25	junction_7	229.794229159703	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109706986	109702574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706670
tx.15495	chr5	-	1208	8	NNC	ENSMUSG00000033467.13	novel	1323	8	NA	NA	-127	1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	231.923280770313	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGGCCAGCCATCATT	NA	False	NA	NA	False	NA	NA	NA	109706986	109702577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706913
tx.15496	chr5	-	3155	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	187	-1	187	1	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCATGGTCATGGTATCT	6318	False	NA	NA	False	NA	NA	NA	109838720	109822409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
tx.15497	chr5	-	2596	4	FSM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	-120	-475	-120	475	multi-exon	FALSE	canonical	3	85	junction_1	29.0631496343164	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCCATATGCCTTTTT	7826	False	NA	NA	False	NA	NA	NA	109899583	109883380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_109885666_109886815_109886877_109887064_109887192_109899460
tx.15498	chr5	-	3742	3	FSM	ENSMUSG00000072762.10	ENSMUST00000100937.4	599	3	169	-3312	-120	471	multi-exon	FALSE	canonical	3	125	junction_2	15.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATTATAGCCATATGCCT	7826	False	NA	NA	False	NA	NA	NA	109899583	109883384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_109886877_109887064_109887192_109899460
tx.15499	chr5	-	2023	4	NNC	ENSMUSG00000105471.2	novel	665	2	NA	NA	-4	-12826	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	67.6214955961983	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCTTGGTATT	NA	False	NA	NA	False	NA	NA	NA	109944168	109930098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_109931814_109932961_109933023_109933207_109933335_109944048
tx.1550	chr10	-	2555	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	47	-5	-12	0	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	1202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5245	False	NA	NA	False	NA	NA	NA	62322537	62291050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
tx.15500	chr5	-	3900	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10902	1497	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	126	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGTGCTCAACAATTAAT	NA	False	NA	NA	False	NA	NA	NA	109992913	109979869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
tx.15501	chr5	+	4205	5	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	9.67923034130297	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGAATTCTTGTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	110014554	110033393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_110014679_110017351_110017480_110027935_110028063_110028252_110028314_110029628
tx.15502	chr5	+	4048	4	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGGAGAATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	110014577	110033387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
tx.15503	chr5	+	3846	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	245	-1674	245	1674	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTGCTCAGCAATTAAT	NA	False	NA	NA	False	NA	NA	NA	110071510	110093476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
tx.15504	chr5	+	3900	6	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	245	1676	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	79.9714949216282	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	NA	False	NA	NA	NA	110071510	110093478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_110071633_110076627_110076764_110088291_110088419_110088605_110088667_110089940_110090072_110090155
tx.15505	chr5	+	3759	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	248	1674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.5369804928106	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTGCTCAGCAATTAAT	NA	False	NA	NA	False	NA	NA	NA	110071513	110093476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940_110090072_110090155
tx.15506	chr5	+	3848	5	FSM	ENSMUSG00000066613.15	ENSMUST00000125213.8	868	5	-11	-2969	0	1667	multi-exon	FALSE	canonical	3	13	junction_2	94.3514043350707	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTGCTCAGCAATTAAT	8370	False	NA	NA	False	NA	NA	NA	110144386	110159944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110144500_110151218_110151319_110154809_110154937_110155121_110155183_110156497
tx.15507	chr5	+	3758	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-9	-1668	-9	1668	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGCTCAGCAATTAATT	8361	False	NA	NA	False	NA	NA	NA	110144377	110159945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
tx.15508	chr5	+	2570	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	-10	-2109	-9	-442	multi-exon	FALSE	canonical	3	208	junction_1	18.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGCCTTACAAGTGTG	8361	False	NA	NA	False	NA	NA	NA	110144377	110157442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110144500_110154809_110154937_110155121
tx.15509	chr5	-	2441	7	FSM	ENSMUSG00000033434.16	ENSMUST00000127628.6	1481	7	-957	-3	2	-1	multi-exon	FALSE	canonical	3	206	junction_1	14.1234635349203	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	NA	False	NA	NA	NA	110256025	110251841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518
tx.1551	chr10	-	2479	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5245	False	NA	NA	False	NA	NA	NA	62322537	62291050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
tx.15510	chr5	-	1621	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	-6	2	-6	1	multi-exon	FALSE	canonical	3	93	junction_7	48.631900316511	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	NA	False	NA	NA	NA	110256069	110251842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
tx.15511	chr5	+	3161	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	186	-189	-58	189	multi-exon	TRUE	canonical	3	28	junction_1	12.7744862910412	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACCTGGGTAATTGACAT	2135	False	NA	NA	False	NA	NA	NA	110258143	110277849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
tx.15512	chr5	+	4907	5	FSM	ENSMUSG00000023284.16	ENSMUST00000147631.8	748	5	-51	-4108	-36	1732	multi-exon	FALSE	canonical	3	14	junction_1	18.0052075800308	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACCTGAGAGTCAAGAT	2157	False	NA	NA	False	NA	NA	NA	110258165	110279392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112
tx.15513	chr5	+	3156	18	FSM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	2	1	0	1	multi-exon	FALSE	canonical	3	248	junction_2	36.3883322871989	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	NA	False	NA	NA	NA	110283716	110319836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
tx.15514	chr5	+	3148	18	FSM	ENSMUSG00000014668.16	ENSMUST00000014812.13	3146	18	-4	2	-1	1	multi-exon	FALSE	canonical	3	81	junction_11	67.7699140155478	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	NA	False	NA	NA	NA	110283721	110319836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
tx.15515	chr5	+	5074	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	-232	-37	-54	37	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTGGGAGGTAATG	NA	False	NA	NA	False	NA	NA	NA	110324512	110371104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
tx.15516	chr5	+	4869	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	-52	3315	-52	-46	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGTGGCTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	110324514	110371021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
tx.15517	chr5	+	5113	24	NIC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	10	209	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.7049976560749	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGATTAAAAGCATAGTCA	NA	False	NA	NA	False	NA	NA	NA	110324772	110371276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_110324916_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
tx.15518	chr5	+	5251	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	4	-1178	4	0	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	332	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGATGTCTGGGAGATG	NA	False	NA	NA	False	NA	NA	NA	110378873	110404513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
tx.15519	chr5	+	5245	13	FSM	ENSMUSG00000029501.15	ENSMUST00000031474.11	5215	13	-30	0	7	0	multi-exon	FALSE	canonical	3	39	junction_3	61.1323700396661	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGATGTCTGGGAGATG	NA	False	NA	NA	False	NA	NA	NA	110378876	110404513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385523_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
tx.1552	chr10	-	2452	7	FSM	ENSMUSG00000036955.17	ENSMUST00000065887.14	2472	7	18	2	1	-2	multi-exon	FALSE	canonical	3	136	junction_2	17.3629554575891	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTTTATTACCTCTT	8219	False	NA	NA	False	NA	NA	NA	62414218	62394250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
tx.15520	chr5	-	4370	5	ISM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	56	4	23	-4	intron_retention	FALSE	canonical	3	390	junction_2	122.303924712169	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTTTATTTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	110417697	110407024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952
tx.15521	chr5	-	2022	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	46	30	-13	-5	multi-exon	FALSE	canonical	3	275	junction_2	153.77594090104	271	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTTATTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	110417733	110407025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
tx.15522	chr5	-	2020	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	19	5	-14	-5	multi-exon	FALSE	canonical	3	390	junction_2	111.169420255752	323	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTTATTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	110417734	110407025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
tx.15523	chr5	-	1042	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	-10	9	-10	4	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	221	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	110434062	110422156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
tx.15524	chr5	+	7111	49	FSM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	31	21	-4	0	multi-exon	FALSE	canonical	2	122	junction_13	49.0675377809901	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	NA	False	NA	NA	NA	110434202	110485319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
tx.15525	chr5	-	4000	18	FSM	ENSMUSG00000043323.18	ENSMUST00000198768.3	3934	18	73	-139	-26	139	multi-exon	FALSE	canonical	3	98	junction_9	64.5158171105307	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAGAAACCCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	110596395	110510296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
tx.15526	chr5	-	3944	18	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-24	136	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	75.3198944847264	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTCTAGAAACCCCTC	NA	False	NA	NA	False	NA	NA	NA	110596393	110510299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
tx.15527	chr5	-	3185	2	FSM	ENSMUSG00000043323.18	ENSMUST00000198415.3	2692	2	-496	3	-496	-3	multi-exon	FALSE	canonical	3	598	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGTGTCTTATTATTT	NA	False	NA	NA	False	NA	NA	NA	110581683	110577743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110580012_110580766
tx.15528	chr5	-	3120	3	FSM	ENSMUSG00000043323.18	ENSMUST00000200293.2	976	3	-26	-2118	-26	-2	multi-exon	FALSE	canonical	3	401	junction_2	98.5	578	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGTCTTATTATTTA	NA	False	NA	NA	False	NA	NA	NA	110596395	110577742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110580012_110580766_110580968_110595745
tx.15529	chr5	+	1179	3	Intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	4	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAGAGACAAGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	110615122	110625311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_110615829_110622235_110622403_110625005
tx.1553	chr10	-	4734	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-10	-2	-10	2	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	1064	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTGGTGGCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	62438070	62416027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
tx.15530	chr5	-	1879	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	29	167	-8	-167	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	839	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8870	False	NA	NA	False	NA	NA	NA	110801254	110796450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
tx.15531	chr5	+	2542	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	6	2298	6	327	multi-exon	TRUE	canonical	3	94	junction_7	18.2382195693885	195	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTCCCGATAGCTCC	NA	False	NA	NA	False	NA	NA	NA	110801322	110806064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
tx.15532	chr5	+	7507	14	Fusion	ENSMUSG00000105161.2_ENSMUSG00000029504.6	novel	4846	15	NA	NA	8	16	intron_retention	FALSE	canonical	3	94	junction_6	17.8066538989481	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATTTCCTATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	110801324	110810880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
tx.15533	chr5	-	3285	11	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	93852	-38	-7868	38	3prime_fragment	FALSE	canonical	3	96	junction_6	11.838918869559	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGGCTTTCAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	110824541	110812200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316
tx.15534	chr5	-	10920	53	NIC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_41	25.0433942913722	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTGTTCTGTCTTAA	NA	False	NA	NA	False	NA	NA	NA	110918467	110812243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
tx.15535	chr5	-	2301	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	-20	1392	-20	-994	multi-exon	FALSE	canonical	3	52	junction_3	2.77263412660235	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTTGCTGTTAGTA	NA	False	NA	NA	False	NA	NA	NA	110918471	110886929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
tx.15536	chr5	-	1798	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	14	2	9	-1	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTGCCTATTTTCCT	NA	False	NA	NA	False	NA	NA	NA	110928448	110921534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
tx.15537	chr5	-	2152	5	ISM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	1	3	1	-2	intron_retention	FALSE	canonical	3	492	junction_3	32.6448694284416	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	NA	False	NA	NA	NA	110928461	110921535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552
tx.15538	chr5	-	1507	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	1	2	1	-2	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	NA	False	NA	NA	NA	110928480	110921535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
tx.15539	chr5	-	5221	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	-9	1	-9	-1	multi-exon	TRUE	canonical	3	530	junction_12	186.450389110485	683	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	NA	False	NA	NA	NA	110957972	110932354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
tx.1554	chr10	-	2871	6	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	14181	-3	2077	3	3prime_fragment	FALSE	canonical	3	611	junction_2	49.6282177798075	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGGTGGCTTTTATT	NA	False	NA	-98	True	NA	NA	NA	62423879	62416026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782
tx.15540	chr5	-	5239	28	FSM	ENSMUSG00000029512.12	ENSMUST00000200299.2	3581	28	-53	-1605	-9	-1	multi-exon	FALSE	canonical	3	128	junction_11	217.248929557064	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	NA	False	NA	NA	NA	110957972	110932354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
tx.15541	chr5	-	782	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	13	9	13	1	multi-exon	FALSE	canonical	3	311	junction_3	42.8691030930203	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTCTGCTAATTGGA	NA	False	NA	NA	False	NA	NA	NA	110987630	110976944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
tx.15542	chr5	-	584	3	ISM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	13	6782	13	-6771	5prime_fragment	FALSE	canonical	3	372	junction_2	33.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTCTTTGTAAATCC	NA	False	NA	NA	False	NA	NA	NA	110987630	110983717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_110983936_110984172_110984270_110987361
tx.15543	chr5	+	2404	16	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	67.6591457232502	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	9196	False	NA	NA	False	NA	NA	NA	110987862	111022006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
tx.15544	chr5	+	2284	15	FSM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	-13	5	4	-5	multi-exon	FALSE	canonical	3	120	junction_1	48.9833895211386	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	9186	False	NA	NA	False	NA	NA	NA	110987852	111022006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
tx.15545	chr5	+	2311	15	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-7	5	combination_of_known_splicesites	TRUE	canonical	3	52	junction_12	80.9591733845031	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTAGTAGTTTGTTGTG	9171	False	NA	NA	False	NA	NA	NA	110987837	111022004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
tx.15546	chr5	+	2096	3	FSM	ENSMUSG00000033209.18	ENSMUST00000143505.2	1557	3	-59	-480	-40	480	multi-exon	FALSE	canonical	3	14	junction_2	7	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCCTCCCTCTTCAA	NA	False	NA	NA	False	NA	NA	NA	111027628	111062662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_111027855_111040697_111040977_111061071
tx.15547	chr5	+	2679	10	NIC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	433.102702158834	113	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	111478617	111536225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
tx.15548	chr5	+	2760	11	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	375.1786774325	1346	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	111478621	111536225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
tx.15549	chr5	+	6989	2	FSM	ENSMUSG00000070576.5	ENSMUST00000094463.5	6860	2	-140	11	-60	-11	multi-exon	FALSE	canonical	3	6	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGGGCATGTTTGTGG	NA	False	NA	NA	False	NA	NA	NA	111565167	111604888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_111569750_111602481
tx.1555	chr10	-	4426	14	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	3534	-2	3534	2	3prime_fragment	FALSE	canonical	3	576	junction_9	52.0987910000668	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTGGTGGCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	62434526	62416027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010
tx.15550	chr5	-	1906	5	NNC	ENSMUSG00000085271.8	novel	906	5	NA	NA	0	626	intron_retention	FALSE	canonical	2	8	junction_4	1.08972473588517	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACCTGTAAGATGCAGGA	NA	False	NA	NA	False	NA	NA	NA	111909569	111881523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_111883050_111886992_111887080_111887701_111887776_111895707_111895859_111909501
tx.15551	chr5	+	1816	7	FSM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	-2	-1	1	1	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	112424570	112463222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
tx.15552	chr5	+	1893	7	NIC	ENSMUSG00000029344.16	novel	1813	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.99956933606	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	112424569	112463221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_112424638_112451765_112451838_112455431_112456421_112457554_112457754_112459549_112459601_112461107_112461157_112462756
tx.15553	chr5	+	887	6	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.943779479539	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGAGTGAGTAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	112424585	112463220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_112424638_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
tx.15554	chr5	+	1839	7	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	-39	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	87.1615677284942	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	112436588	112463222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_112436679_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
tx.15555	chr5	+	3533	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	29	-2	29	2	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTATATGGGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	112474252	112485941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
tx.15556	chr5	-	1087	7	FSM	ENSMUSG00000029346.13	ENSMUST00000146510.8	1064	7	-22	-1	-2	1	multi-exon	FALSE	canonical	3	101	junction_3	14.8884742894182	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	112490908	112485256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_112485608_112485867_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
tx.15557	chr5	-	1169	7	NIC	ENSMUSG00000029346.13	novel	1064	7	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	36.3168923046379	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	112490895	112485256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_112485608_112485867_112485914_112486183_112486434_112487584_112487684_112487762_112487990_112488961_112489003_112490740
tx.15558	chr5	+	2844	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	-9	1	3	-1	multi-exon	TRUE	canonical	3	24	junction_1	21.6682900317355	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	112490951	112526279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
tx.15559	chr5	+	3329	14	FSM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	15	1	-2	-1	multi-exon	FALSE	canonical	3	34	junction_1	19.6098031274724	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	112490963	112526279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
tx.1556	chr10	-	3501	10	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	10315	-2	-995	2	3prime_fragment	FALSE	canonical	3	576	junction_9	55.2408866289776	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTGGTGGCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	62427745	62416027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595
tx.15560	chr5	+	3617	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	24.7453300836086	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	112490977	112526279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_112491030_112491607_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
tx.15561	chr5	-	1760	4	NIC	ENSMUSG00000029348.12	novel	2678	3	NA	NA	14	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	11.1455023315337	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGTAATCATCCTAAAT	NA	False	NA	NA	False	NA	NA	NA	112542718	112533314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_112533728_112534624_112534739_112539023_112540122_112542583
tx.15562	chr5	-	6608	21	NNC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.080028825974	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGAGGCTGACATCT	507	False	NA	NA	False	NA	NA	NA	113163412	113058346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076479_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
tx.15563	chr5	-	6571	21	FSM	ENSMUSG00000042249.12	ENSMUST00000200332.5	4455	21	-1	-2115	-1	-2	multi-exon	FALSE	canonical	1	4	junction_18	18.223885425452	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTGAGGCTGACA	538	False	NA	NA	False	NA	NA	NA	113163381	113058349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117175_113121372_113121447_113133630_113133708_113163232
tx.15564	chr5	-	6555	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	-24	2	-24	-2	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTGAGGCTGACA	515	False	NA	NA	False	NA	NA	NA	113163404	113058349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
tx.15565	chr5	-	6420	20	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	18.5694772345519	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGGCTTGAGGCTGA	540	False	NA	NA	False	NA	NA	NA	113163379	113058351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
tx.15566	chr5	-	10288	13	FSM	ENSMUSG00000051339.11	ENSMUST00000211733.2	10238	13	-50	0	-50	0	multi-exon	FALSE	canonical	1	1	junction_11	8.88194172964949	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGCTGCATGTCCAC	NA	False	NA	NA	False	NA	NA	NA	113369152	113234188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113341626_113341774_113369076
tx.15567	chr5	-	8522	12	ISM	ENSMUSG00000051339.11	ENSMUST00000211733.2	10238	13	27327	1692	27327	-1692	3prime_fragment	FALSE	canonical	1	1	junction_11	7.64933962471368	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAATTGGGGAGGAAA	5878	False	NA	NA	False	NA	NA	NA	113341775	113235880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113341626
tx.15568	chr5	-	7521	12	NIC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-36	-2606	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	7.42343842276131	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGAGTCTAACTTGT	NA	False	NA	NA	False	NA	NA	NA	113369138	113236794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113369076
tx.15569	chr5	-	4335	16	FSM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	13	-9	-1	0	multi-exon	FALSE	canonical	3	35	junction_5	17.3674024156368	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGGTCTGGTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	113428454	113391085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
tx.1557	chr10	-	2371	14	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_6	72.4032102331865	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8108	False	NA	NA	False	NA	NA	NA	62486995	62451793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
tx.15570	chr5	-	4181	17	NNC	ENSMUSG00000042216.14	novel	5161	25	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	19.3083531146496	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAACCGTGGGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	113428463	113391092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
tx.15571	chr5	-	5133	25	FSM	ENSMUSG00000042216.14	ENSMUST00000048112.13	5161	25	28	0	-19	0	multi-exon	FALSE	canonical	3	12	junction_24	23.4519307425968	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGGTCTGGTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	113458624	113391085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
tx.15572	chr5	+	3250	8	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50724	5	991	2	3prime_fragment	FALSE	canonical	3	32	junction_6	7.59430506285829	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCCAGTTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	113689036	113727781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
tx.15573	chr5	-	603	2	Intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTAGATGTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	113734554	113733855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_113734289_113734384
tx.15574	chr5	+	3164	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	-26	-5	-26	5	multi-exon	FALSE	canonical	3	46	junction_2	4.5	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCGTTGTCTCATCCAG	689	False	NA	NA	False	NA	NA	NA	113873837	113878666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_113874111_113874881_113875234_113876127
tx.15575	chr5	-	3589	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	858	0	-14	0	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	738	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	NA	False	NA	NA	NA	113909713	113880506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
tx.15576	chr5	-	3319	19	NNC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_18	98.1170251143192	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	NA	False	NA	NA	NA	113910774	113880506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113910712
tx.15577	chr5	+	1877	4	FSM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-9	-473	-9	-2	multi-exon	FALSE	canonical	3	687	junction_1	22.86676384819	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTGTACTGAACCT	3641	False	NA	NA	False	NA	NA	NA	113910854	113916332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831
tx.15578	chr5	+	894	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	48	15	-7	0	multi-exon	FALSE	canonical	3	687	junction_1	28.9179874818425	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3643	False	NA	NA	False	NA	NA	NA	113910856	113916334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
tx.15579	chr5	-	3449	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	42	0	-11	0	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	1691	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	114046777	113980496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
tx.1558	chr10	-	2646	16	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	70.2071854505569	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8105	False	NA	NA	False	NA	NA	NA	62486998	62451793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
tx.15581	chr5	-	5306	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4940	28	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114099877	114077797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
tx.15582	chr5	-	5760	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6210	28	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	66	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114111027	114077797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
tx.15583	chr5	-	5808	16	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	23	28	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	132.256753660782	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131865	114077797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114119856_114119962_114127706_114127748_114131724
tx.15584	chr5	-	5699	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	94	2643	-21	28	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131861	114077797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
tx.15585	chr5	-	2355	9	ISM	ENSMUSG00000042078.15	ENSMUST00000134790.8	1682	15	22231	-1161	-106	-54	3prime_fragment	FALSE	canonical	3	12	junction_8	2.91279504943276	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGGGATTTAAATCTG	NA	False	NA	NA	False	NA	NA	NA	114181048	114165024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866
tx.15586	chr5	+	3382	13	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	2	-1217	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	11.3293497901101	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCCAAGTGCGGTGCT	NA	False	NA	NA	False	NA	NA	NA	114238377	114261564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249932_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
tx.15587	chr5	+	3410	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	-21	1215	-21	-1215	multi-exon	FALSE	canonical	3	37	junction_5	7.25095779113966	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCAAGTGCGGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	114238354	114261566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
tx.15588	chr5	+	4079	12	NNC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	2	-1793	intron_retention	FALSE	canonical	0	0	junction_6	20.13713316814	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCTTCTGGTCTAAGG	NA	False	NA	NA	False	NA	NA	NA	114238377	114260988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249976_114250947_114251043_114252634_114252788_114257099_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
tx.15589	chr5	-	1153	3	ISM	ENSMUSG00000044339.13	ENSMUST00000053657.13	1073	4	25	1	25	-1	intron_retention	FALSE	canonical	3	542	junction_2	7.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	8045	False	NA	NA	False	NA	NA	NA	114266212	114261987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_114262316_114263592_114263792_114265586
tx.1559	chr10	-	2544	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	-10	1	-10	-1	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTAAGAGTTTTC	8096	False	NA	NA	False	NA	NA	NA	62487007	62451794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
tx.15590	chr5	-	1267	5	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	230.226383153626	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7989	False	NA	NA	False	NA	NA	NA	114266268	114261986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_114262316_114263592_114263792_114263920_114264169_114265586_114265831_114266021
tx.15591	chr5	-	901	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	6	-8	6	-1	multi-exon	FALSE	canonical	3	267	junction_3	133.312498372141	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	7984	False	NA	NA	False	NA	NA	NA	114266273	114261987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
tx.15592	chr5	-	1079	4	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-2544	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_3	211.98480029369	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	5434	False	NA	NA	False	NA	NA	NA	114268823	114261986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_114262316_114263592_114263792_114265586_114265831_114268516
tx.15593	chr5	+	1955	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	27	3	27	-1	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	293	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGTGCCGACTATTCT	NA	False	NA	NA	False	NA	NA	NA	114268473	114277381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
tx.15594	chr5	+	1891	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	244	1	-59	-1	multi-exon	FALSE	canonical	3	690	junction_3	32.487536071546	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGTGCCGACTATTCT	NA	False	NA	NA	False	NA	NA	NA	114269230	114277381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
tx.15595	chr5	+	1627	4	ISM	ENSMUSG00000042010.17	ENSMUST00000143276.2	6680	41	48486	1	-68	-1	3prime_fragment	FALSE	canonical	3	58	junction_1	12.0369800568452	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCTGGCCTTGATTT	5492	False	NA	NA	False	NA	NA	NA	114386325	114388819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_114386380_114386644_114386816_114386935_114387073_114387554
tx.15596	chr5	+	1999	2	NIC	ENSMUSG00000042010.17	novel	8788	53	NA	NA	-52	0	intron_retention	FALSE	canonical	3	86	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	5508	False	NA	NA	False	NA	NA	NA	114386341	114388822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_114387073_114387554
tx.15597	chr5	+	1880	3	NIC	ENSMUSG00000042010.17	novel	8788	53	NA	NA	-53	0	intron_retention	FALSE	canonical	3	80	junction_1	3	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	5507	False	NA	NA	False	NA	NA	NA	114386340	114388822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_114386816_114386935_114387073_114387554
tx.15598	chr5	-	3047	10	FSM	ENSMUSG00000042002.12	ENSMUST00000044790.12	3016	10	-32	1	-32	-1	multi-exon	FALSE	canonical	2	4	junction_3	3.91893157523298	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGACTCAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	114411900	114392225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114393812_114394619_114395013_114396568_114396777_114397810_114397908_114398410_114398539_114398926_114399047_114399135_114399264_114401069_114401216_114411033_114411123_114411748
tx.15599	chr5	-	3099	7	FSM	ENSMUSG00000001098.16	ENSMUST00000001125.6	1026	7	-20	-2053	5	-2	multi-exon	FALSE	canonical	3	21	junction_4	38.0379927032025	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCGCCTTCTGGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	114518564	114501629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507092_114508119_114508290_114512956_114513171_114518486
tx.1560	chr10	-	4464	25	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	100.456449588311	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	62628047	62579706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627908
tx.15600	chr5	-	3084	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	15	4	-4	-4	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCGCCTTCTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	114518554	114501631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
tx.15601	chr5	+	4969	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	221	4	2	-3	multi-exon	TRUE	canonical	3	241	junction_19	27.3486858419916	251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACGGCTCTGTTCTGGTTT	NA	False	NA	NA	False	NA	NA	NA	114518888	114559226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
tx.15602	chr5	-	4886	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	-28	-3581	1	-13	multi-exon	TRUE	canonical	3	177	junction_4	16.4738506458581	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	NA	False	NA	NA	False	NA	NA	NA	114582081	114569107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
tx.15603	chr5	-	2967	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	40	13	1	-13	multi-exon	FALSE	canonical	3	162	junction_1	19.5604032422647	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	NA	False	NA	NA	False	NA	NA	NA	114582081	114569107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
tx.15604	chr5	+	1680	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-23	3	-3	-3	multi-exon	FALSE	canonical	3	102	junction_10	13.5410487038486	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTTGGGCCCTGTGGG	NA	False	NA	NA	False	NA	NA	NA	114582343	114598649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
tx.15605	chr5	+	3534	3	FSM	ENSMUSG00000041930.8	ENSMUST00000043650.8	2930	3	-604	0	-604	0	multi-exon	FALSE	canonical	3	54	junction_1	5	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTCAGCTGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	114705472	114751281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_114706486_114732401_114732529_114748887
tx.15606	chr5	-	3219	16	FSM	ENSMUSG00000014158.13	ENSMUST00000071968.9	3228	16	7	2	4	0	multi-exon	FALSE	canonical	2	11	junction_12	3.23865541373096	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGGGTGAGGTTGG	NA	False	NA	NA	False	NA	NA	NA	114796475	114760214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782992_114796402
tx.15607	chr5	-	1756	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	0	6	0	-6	multi-exon	TRUE	canonical	3	1353	junction_4	27.6541136180497	1048	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCATGTGTCTGTGGCG	NA	False	NA	NA	False	NA	NA	NA	114829045	114807464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
tx.15608	chr5	+	2836	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	46	0	-13	0	multi-exon	FALSE	canonical	2	32	junction_2	9.3392838174146	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	NA	False	NA	NA	False	NA	NA	NA	114845866	114860388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
tx.15609	chr5	-	2787	18	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	59.1705060729358	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTCCATAATGTCC	NA	False	NA	NA	False	NA	NA	NA	114911567	114867633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.1561	chr10	-	4399	25	FSM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	-49	2	-2	-2	multi-exon	FALSE	canonical	0	0	junction_11	99.9008883844383	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	62628059	62579708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
tx.15610	chr5	-	2877	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	NA	False	NA	NA	NA	114911566	114867635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.15611	chr5	-	3023	20	FSM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	-39	0	-6	0	multi-exon	FALSE	canonical	3	71	junction_12	54.5305322490843	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	NA	False	NA	NA	NA	114911562	114867635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.15612	chr5	-	3024	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	NA	False	NA	NA	NA	114911566	114867635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.15613	chr5	-	2934	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	NA	False	NA	NA	NA	114911566	114867635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.15614	chr5	-	2874	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	-10	2168	-10	0	multi-exon	FALSE	canonical	3	90	junction_6	46.75943160951	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	NA	False	NA	NA	NA	114911566	114867635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.15615	chr5	-	2941	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	64.898900483372	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	NA	False	NA	NA	NA	114911570	114867635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.15616	chr5	-	2789	18	FSM	ENSMUSG00000041890.18	ENSMUST00000043283.14	4938	18	-15	2164	-12	0	multi-exon	FALSE	canonical	3	47	junction_4	65.8330172418791	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	NA	False	NA	NA	NA	114911568	114867635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.15617	chr5	-	1946	9	ISM	ENSMUSG00000041890.18	ENSMUST00000155908.8	2338	18	-12	21421	-12	2961	5prime_fragment	FALSE	canonical	3	71	junction_1	61.3564126640403	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTCTCTGTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	114911568	114889351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.15618	chr5	+	3444	15	FSM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	272	1	4	-1	multi-exon	FALSE	canonical	3	367	junction_6	30.6590866112599	551	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGAGTTTCATTTCT	1118	False	NA	NA	False	NA	NA	NA	114913009	114943882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
tx.15619	chr5	-	1307	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	23	3	-8	-3	multi-exon	FALSE	canonical	3	46	junction_1	0	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCTGTCTGCTGTTCTG	742	False	NA	NA	False	NA	NA	NA	114952014	114946259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114947393_114951840
tx.1562	chr10	-	4409	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	-15	-532	-15	-2	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	427	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	62628080	62579708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
tx.15620	chr5	-	565	2	FSM	ENSMUSG00000072694.9	ENSMUST00000061251.6	579	2	14	0	14	0	multi-exon	FALSE	canonical	3	102	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTTGGCGTCCTTCT	764	False	NA	NA	False	NA	NA	NA	114951992	114950853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114951267_114951840
tx.15621	chr5	-	944	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	1	2	1	-2	multi-exon	FALSE	canonical	3	282	junction_1	0	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTTGTGGGTG	9594	False	NA	NA	False	NA	NA	NA	114961528	114959997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_114960787_114961373
tx.15622	chr5	+	2180	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	-2	3	-2	0	multi-exon	FALSE	canonical	3	18	junction_2	3.38230690505755	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTGGTCCTCATTTGT	7856	False	NA	NA	False	NA	NA	NA	115061320	115075971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
tx.15623	chr5	+	1334	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	38	1235	-8	764	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	255	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCCTGGTCAGTGC	NA	False	NA	NA	False	NA	NA	NA	115080254	115086607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
tx.15624	chr5	-	2789	10	NNC	ENSMUSG00000029556.13	novel	3191	10	NA	NA	-2241	0	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_9	4.34897462017354	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAAGCTTCCTGACTGT	7917	False	NA	NA	False	NA	NA	NA	115111394	115087038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115111247
tx.15625	chr5	+	3200	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	4	0	4	0	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	1407	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTCCTGACTTCACT	1487	False	NA	NA	False	NA	NA	NA	115149199	115236849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
tx.15626	chr5	-	1837	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	33	0	-3	0	multi-exon	FALSE	canonical	3	425	junction_3	13.7822573362984	465	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9807	False	NA	NA	False	NA	NA	NA	115257372	115248357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
tx.15627	chr5	-	1925	9	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-9	0	intron_retention	FALSE	canonical	3	425	junction_3	14.5811307860536	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9801	False	NA	NA	False	NA	NA	NA	115257378	115248357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
tx.15628	chr5	-	3616	5	FSM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	31	12	-19	-12	multi-exon	FALSE	canonical	3	283	junction_1	7.58287544405155	591	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTCTGACTTGCCTC	NA	False	NA	NA	False	NA	NA	NA	115273003	115260620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115263560_115265069_115265243_115265360_115265473_115268525_115268640_115272725
tx.15629	chr5	-	5372	3	ISM	ENSMUSG00000048578.12	ENSMUST00000124678.2	505	4	688	-5124	688	-1	3prime_fragment	FALSE	canonical	3	1139	junction_2	15	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	115288417	115281040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_115286204_115288127_115288186_115288266
tx.1563	chr10	-	4226	24	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_11	80.1914297567216	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	62628106	62579706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
tx.15630	chr5	-	5966	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-12	1	-12	-1	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1063	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	4712	False	NA	NA	False	NA	NA	NA	115296250	115281040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
tx.15631	chr5	-	5580	4	FSM	ENSMUSG00000048578.12	ENSMUST00000124678.2	505	4	50	-5125	50	0	multi-exon	FALSE	canonical	3	1139	junction_2	22.4845626053867	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	9728	False	NA	NA	False	NA	NA	NA	115289055	115281039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874
tx.15632	chr5	-	816	3	ISM	ENSMUSG00000029544.17	ENSMUST00000112109.8	1071	7	8100	-25	7937	0	3prime_fragment	FALSE	canonical	3	234	junction_2	2	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	2385	False	NA	NA	False	NA	NA	NA	115311381	115306747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_115307208_115310817_115310966_115311173
tx.15633	chr5	-	3553	5	ISM	ENSMUSG00000029544.17	ENSMUST00000112109.8	1071	7	2492	-25	2329	0	3prime_fragment	FALSE	canonical	3	159	junction_4	35.5765020765111	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	10011	False	NA	NA	False	NA	NA	NA	115316989	115306747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298
tx.15634	chr5	-	1542	7	FSM	ENSMUSG00000029544.17	ENSMUST00000031519.14	1370	7	-172	0	-172	0	multi-exon	FALSE	canonical	3	35	junction_6	80.5826008239716	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	9984	False	NA	NA	False	NA	NA	NA	115324539	115306747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115324070
tx.15635	chr5	-	4059	6	ISM	ENSMUSG00000029544.17	ENSMUST00000031519.14	1370	7	2351	0	187	0	3prime_fragment	FALSE	canonical	3	48	junction_5	68.8894767000011	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	4984	False	NA	NA	False	NA	NA	NA	115322016	115306747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850
tx.15636	chr5	-	1613	6	FSM	ENSMUSG00000029544.17	ENSMUST00000112113.8	1621	6	7	1	7	-1	multi-exon	FALSE	canonical	3	43	junction_5	70.6693710174358	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGGTGGTCCTTGCTT	8770	False	NA	NA	False	NA	NA	NA	115332433	115306748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115331712
tx.15637	chr5	+	799	2	Intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGAGTCTATTTCCAA	653	False	NA	NA	False	NA	NA	NA	115341972	115343329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_115342190_115342747
tx.15638	chr5	+	845	2	Intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTGGCAAACCTTTCT	653	False	NA	NA	False	NA	NA	NA	115341972	115343351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_115342214_115342747
tx.15639	chr5	+	747	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2198	19	-1	6	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	173	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	NA	False	NA	NA	NA	115376092	115379031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
tx.1564	chr10	-	14450	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	88	3	combination_of_known_junctions	FALSE	canonical	3	63	junction_12	54.9749311555327	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCTGGTAGTCTATTTT	2891	False	NA	NA	False	NA	NA	NA	62723203	62640352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62722950
tx.15640	chr5	+	812	4	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	-1	6	intron_retention	FALSE	canonical	3	770	junction_1	71.2242156073964	49	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	NA	False	NA	NA	NA	115376092	115379031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_115376337_115378220_115378371_115378531_115378616_115378697
tx.15641	chr5	-	3108	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112096.9	3112	17	3	1	0	-1	multi-exon	FALSE	canonical	3	1263	junction_14	135.987361545108	2657	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	NA	False	NA	NA	NA	115410951	115379829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
tx.15642	chr5	+	2007	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	28	2	-1	-2	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	401	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTCAGATGTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	115417752	115435029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
tx.15643	chr5	-	653	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	65	1312	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	692	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	115438993	115436480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115436893_115438571_115438710_115438890
tx.15644	chr5	-	832	2	FSM	ENSMUSG00000009013.6	ENSMUST00000112090.2	729	2	-20	-83	2	0	multi-exon	FALSE	canonical	3	3784	junction_1	0	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	115438991	115436480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115436893_115438571
tx.15645	chr5	+	5021	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-8	-3851	-8	3851	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	8	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATGCAAACACTGGCG	126	False	NA	NA	False	NA	NA	NA	115465227	115474990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
tx.15646	chr5	+	1170	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	511	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTGCAGTTGTCTTTG	126	False	NA	NA	False	NA	NA	NA	115465227	115471139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
tx.15647	chr5	+	7061	3	NIC	ENSMUSG00000029538.15	novel	767	4	NA	NA	20	2921	intron_retention	FALSE	canonical	3	1851	junction_1	23	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTTATGTATGTGTAT	154	False	NA	NA	False	NA	NA	NA	115465255	115474060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_115468718_115470175_115470349_115470634
tx.15648	chr5	-	2211	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	6	-420	6	420	multi-exon	FALSE	canonical	3	122	junction_1	3.5	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTCCTAAGACTCTAA	9715	False	NA	NA	False	NA	NA	NA	115479231	115470877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115472654_115473525_115473630_115478900
tx.15649	chr5	+	4278	1	Genic_Genomic	ENSMUSG00000029538.15	novel	NA	NA	NA	NA	2076	3851	mono-exon	FALSE	NA	NA	NA	NA	NA	11	1	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATGCAAACACTGGCG	2230	False	NA	NA	False	NA	NA	NA	115470712	115474990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr5_+_115470700_115475000
tx.1565	chr10	-	14417	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	130	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	59.2754282050234	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTAGTCTATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	62728635	62640348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
tx.15650	chr5	+	1058	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	14	16	14	-16	multi-exon	FALSE	canonical	3	209	junction_1	0	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGCTCCCAAAACCCT	2428	False	NA	NA	False	NA	NA	NA	115479297	115481612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115479477_115480733
tx.15651	chr5	-	543	3	FSM	ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	16	12	16	3	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	797	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCGTGAGCTGGACG	4870	False	NA	NA	False	NA	NA	NA	115487024	115483712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115483986_115486623_115486767_115486897
tx.15652	chr5	+	3122	15	FSM	ENSMUSG00000054256.12	ENSMUST00000150779.8	3133	15	11	0	11	0	multi-exon	FALSE	canonical	3	46	junction_12	14.3358050392173	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	2400	False	NA	NA	False	NA	NA	NA	115567668	115593757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
tx.15653	chr5	+	3089	15	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_12	16.062378404209	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	2400	False	NA	NA	False	NA	NA	NA	115567668	115593757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
tx.15654	chr5	+	789	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1155	-5	at_least_one_novel_splicesite	FALSE	canonical	3	2118	junction_4	157.856540884437	587	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTGGTGATTGTT	NA	False	NA	NA	False	NA	NA	NA	115603165	115612776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_115603279_115604200_115604380_115608840_115609001_115610051_115610180_115612567
tx.15655	chr5	-	1445	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	349	0	-10	0	multi-exon	FALSE	canonical	3	34	junction_3	4.96865172858795	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGGACTGTGAAC	9369	False	NA	NA	False	NA	NA	NA	115622435	115616068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622390
tx.15656	chr5	+	3784	12	FSM	ENSMUSG00000029528.20	ENSMUST00000086523.7	2667	12	-110	-1007	-13	-2	multi-exon	FALSE	canonical	3	21	junction_6	97.41612200476	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGATGTTATTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	115644756	115694044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689546_115689649_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
tx.15657	chr5	+	3682	11	FSM	ENSMUSG00000029528.20	ENSMUST00000067268.15	3706	11	22	2	-13	-2	multi-exon	FALSE	canonical	3	245	junction_6	21.5722043379901	533	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGATGTTATTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	115644756	115694044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
tx.15658	chr5	+	1095	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	47	216	-23	-216	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	3992	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	NA	False	NA	NA	NA	115697572	115701570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
tx.15659	chr5	+	8537	58	FSM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	17	1	-1	-1	multi-exon	TRUE	canonical	2	352	junction_15	70.6565046091486	363	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	115703329	115760712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
tx.1566	chr10	-	14364	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	122	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	29	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCACCTGGTAGTCTAT	NA	False	NA	NA	False	NA	NA	NA	62728643	62640355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
tx.15660	chr5	+	2247	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	-5	578	-5	-578	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	324	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTCCACTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	115769961	115785217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
tx.15661	chr5	-	1892	3	FSM	ENSMUSG00000041609.17	ENSMUST00000118576.8	1874	3	-16	-2	-16	0	multi-exon	FALSE	canonical	3	4	junction_2	14.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGCCTCAGTTCCTGG	NA	False	NA	NA	False	NA	NA	NA	115791061	115786233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115787629_115789877_115789999_115790685
tx.15662	chr5	-	3959	10	NIC	ENSMUSG00000041609.17	novel	3026	9	NA	NA	-790	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	7.26907877057606	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGCCTCAGTTCCTG	NA	False	NA	NA	False	NA	NA	NA	115870470	115786234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_115787629_115789877_115789999_115793959_115794091_115799433_115799578_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180
tx.15663	chr5	-	3704	9	FSM	ENSMUSG00000041609.17	ENSMUST00000055408.13	3026	9	-679	1	-679	-1	multi-exon	FALSE	canonical	3	12	junction_3	5.84032319311183	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGCCTCAGTTCCTG	NA	False	NA	NA	False	NA	NA	NA	115870359	115786234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115787629_115789877_115789999_115793959_115794091_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180
tx.15664	chr5	+	6531	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	7.55215609798917	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	8477	False	NA	NA	False	NA	NA	NA	115983332	116136557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
tx.15665	chr5	-	1970	8	FSM	ENSMUSG00000029513.15	ENSMUST00000111999.8	2026	8	56	0	-1	0	multi-exon	FALSE	canonical	3	151	junction_7	27.0313499024932	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTGACTCGGCACA	NA	False	NA	NA	False	NA	NA	NA	116162511	116151648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
tx.15666	chr5	-	2062	7	FSM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	21	6	10	-2	multi-exon	FALSE	canonical	3	213	junction_6	10.0788557551606	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTTTTGACTCGGCA	NA	False	NA	NA	False	NA	NA	NA	116162500	116151650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149
tx.15667	chr5	-	2296	6	ISM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	2231	6	-585	-2	3prime_fragment	FALSE	canonical	3	214	junction_3	9.76933979345585	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTTTTGACTCGGCA	NA	False	NA	NA	False	NA	NA	NA	116160290	116151650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541
tx.15668	chr5	+	3264	2	Antisense	novelGene_ENSMUSG00000043913.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTTGCCTTCTGA	NA	False	NA	NA	False	NA	NA	NA	116370518	116376264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_+_116370876_116373357
tx.15669	chr5	-	1814	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	-1	3	-1	-3	multi-exon	FALSE	canonical	3	315	junction_2	24.5	453	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGCTTCATTTAG	NA	False	NA	NA	False	NA	NA	NA	116560924	116546552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_116547550_116553465_116553530_116560171
tx.1567	chr10	-	5076	4	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	33	1499	combination_of_known_junctions	FALSE	canonical	3	182	junction_3	31.4572019664107	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTAAATTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	62728732	62673376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62676158_62700586_62700641_62713930_62715913_62728473
tx.15670	chr5	+	2942	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	0	418	0	-418	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTTCTGATAATGACT	NA	False	NA	NA	False	NA	NA	NA	116576778	116603128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
tx.15671	chr5	+	3140	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	2	-279	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTAGTTGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	116576780	116603267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
tx.15672	chr5	-	3491	9	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	9	2	intron_retention	FALSE	canonical	0	0	junction_5	213.065130887248	29	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCACGTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	117254054	117229747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
tx.15673	chr5	-	2413	11	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_7	190.705637043062	560	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	117254053	117229746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
tx.15674	chr5	-	2326	12	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	222.75524870684	116	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTAAGTTGCCACGTG	NA	False	NA	NA	False	NA	NA	NA	117254062	117229753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
tx.15675	chr5	-	1217	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	25	-2	-17	2	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	1140	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGTATTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	117425665	117420716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
tx.15676	chr5	+	4098	9	NNC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	9.52299847737046	37	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTATGGTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	117457284	117493070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486481_117489624_117489857_117490815
tx.15677	chr5	+	2398	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	23	0	22	0	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	1027	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495391	117516666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
tx.15678	chr5	-	1746	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	8	1042	6	472	multi-exon	TRUE	canonical	3	1613	junction_7	125.046431376509	1676	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	NA	False	NA	NA	NA	117527104	117517209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
tx.15679	chr5	+	6725	28	FSM	ENSMUSG00000029361.19	ENSMUST00000171055.2	4388	28	21	-2358	21	1807	multi-exon	FALSE	canonical	2	8	junction_3	10.777205024873	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCAAGGTGGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	118005204	118094236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_118005992_118017348_118017476_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
tx.1568	chr10	+	3121	9	FSM	ENSMUSG00000071253.9	ENSMUST00000044977.10	3145	9	23	1	-11	-1	multi-exon	FALSE	canonical	3	58	junction_3	11.9314447993527	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGATGGCTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	62756434	62782276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
tx.15680	chr5	+	2740	3	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	82468	-2262	30407	1807	3prime_fragment	FALSE	canonical	3	46	junction_1	6.5	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCAAGGTGGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	118087646	118094236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_118087894_118090829_118090949_118091862
tx.15681	chr5	+	2206	9	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-14	13849	-4	8779	5prime_fragment	FALSE	canonical	3	395	junction_7	31.372509861342	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAGAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	118114834	118134416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434
tx.15682	chr5	+	3906	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	47	6	3	-5	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	280	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGCCAGTGACCTGC	NA	False	NA	NA	False	NA	NA	NA	118114841	118148260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
tx.15683	chr5	+	3885	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-7	5	3	-5	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	758	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGCCAGTGACCTGC	NA	False	NA	NA	False	NA	NA	NA	118114841	118148260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
tx.15685	chr5	+	944	8	FSM	ENSMUSG00000029359.14	ENSMUST00000031304.14	1031	8	84	3	-43	-3	multi-exon	FALSE	canonical	3	55	junction_1	14.2499552451857	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCCCATCTGTCCCTCA	NA	False	NA	NA	False	NA	NA	NA	118165891	118199940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
tx.15686	chr5	+	916	8	NIC	ENSMUSG00000029359.14	novel	785	8	NA	NA	-38	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	22.6445470302252	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCATCCCCATCTGTCC	4330	False	NA	NA	False	NA	NA	NA	118174057	118199936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
tx.15687	chr5	-	3326	11	FSM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	24	1650	-14	-1650	multi-exon	FALSE	canonical	3	339	junction_8	26.290682760248	910	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGTGTGTGCTGCTCCT	NA	False	NA	NA	False	NA	NA	NA	118293505	118204679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
tx.15688	chr5	+	5405	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	-23	0	-23	0	multi-exon	FALSE	canonical	3	61	junction_1	0	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGCCTCTGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	118307789	118327543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_118308194_118322542
tx.15689	chr5	-	4337	11	FSM	ENSMUSG00000032850.17	ENSMUST00000121369.8	4431	11	102	-8	-20	2	multi-exon	FALSE	canonical	3	9	junction_8	4.80520551069359	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCACTGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	118383079	118328798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370466_118370568_118372205_118372283_118375191_118375662_118380522_118380582_118380914_118381097_118383036
tx.1569	chr10	+	4124	21	FSM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	-3	1	-3	0	multi-exon	FALSE	canonical	0	0	junction_20	65.9729300546823	554	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	NA	False	NA	NA	NA	62782801	62809963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
tx.15690	chr5	-	4350	11	NIC	ENSMUSG00000032850.17	novel	4431	11	NA	NA	-36	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	5.24976189936267	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATCTGTGAGTCACTG	NA	False	NA	NA	False	NA	NA	NA	118383095	118328804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370466_118370568_118372205_118372283_118375191_118375665_118380522_118380582_118380914_118381097_118383036
tx.15691	chr5	+	2650	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	18	2981	18	-2981	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTGTGGAATGTGG	1657	False	NA	NA	False	NA	NA	NA	118383309	118401177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
tx.15692	chr5	+	5490	6	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.3255753472143	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATGCTGTTTTACAGT	1656	False	NA	NA	False	NA	NA	NA	118383308	118404152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118399994_118400129
tx.15693	chr5	+	5811	15	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	181541	3	-5059	-3	3prime_fragment	FALSE	canonical	3	34	junction_1	13.0464241719128	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGAGTGGCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	118880324	118903500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
tx.15694	chr5	+	4829	12	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	186665	0	65	0	3prime_fragment	FALSE	canonical	3	47	junction_3	10.9363296304164	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGAGTGGCTCTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	118885448	118903503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
tx.15695	chr5	+	3159	4	ISM	ENSMUSG00000018076.13	ENSMUST00000202538.4	4389	11	9770	-1522	6702	0	3prime_fragment	FALSE	canonical	3	73	junction_2	4.71404520791032	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGAGTGGCTCTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	118895153	118903503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_118895300_118897166_118897329_118899350_118899464_118900765
tx.15696	chr5	+	4996	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-963	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	336.111123737373	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	NA	False	NA	NA	NA	119807770	119822789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_119808126_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
tx.15697	chr5	+	4716	9	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	314.870608345714	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	NA	False	NA	NA	NA	119809047	119822789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
tx.15698	chr5	+	4659	8	FSM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	117	1	-39	-1	multi-exon	FALSE	canonical	3	95	junction_1	319.496925985659	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	NA	False	NA	NA	NA	119809043	119822788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
tx.15699	chr5	+	4854	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	2	0	2	0	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	758	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	NA	False	NA	NA	NA	119809084	119822789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
tx.1570	chr10	+	4182	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	17.5952179725552	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	NA	NA	NA	62816011	62849734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840392_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
tx.15700	chr5	+	4794	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	351	-163	2	0	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	731	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	NA	False	NA	NA	NA	119809084	119822789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
tx.15701	chr5	+	2889	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9253	0	22	0	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	253	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	NA	False	NA	NA	NA	119818335	119822789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_119819131_119820695
tx.15702	chr5	+	3983	24	FSM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	26	1	26	1	multi-exon	FALSE	canonical	3	93	junction_16	11.5488606136917	223	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGATGTCACTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	120254555	120337045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
tx.15703	chr5	-	2725	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	9	1474	-4	491	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	399	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGGTTATTGTATCT	NA	False	NA	NA	False	NA	NA	NA	120641681	120622820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
tx.15704	chr5	+	2885	16	FSM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	13	0	13	0	multi-exon	FALSE	non_canonical	0	0	junction_5	54.5084702897938	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	9	True	NA	NA	False	NA	NA	NA	120649245	120672089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
tx.15705	chr5	+	2729	14	FSM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	-64	-4	20	0	multi-exon	FALSE	non_canonical	0	0	junction_5	64.1450833343938	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	16	True	NA	NA	False	NA	NA	NA	120649252	120672089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
tx.15706	chr5	+	2542	13	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	23	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	57.0079794609686	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	19	True	NA	NA	False	NA	NA	NA	120649255	120672089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
tx.15707	chr5	+	2789	15	ISM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	1945	0	-30	0	3prime_fragment	FALSE	non_canonical	0	0	junction_4	56.2808192215154	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	1836	False	NA	NA	False	NA	NA	NA	120651177	120672089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
tx.15708	chr5	-	2806	28	FSM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	10	1896	10	-1896	multi-exon	TRUE	canonical	2	12	junction_13	5.06365515872966	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGGGAACCATGTGTGT	9193	False	NA	NA	False	NA	NA	NA	120726728	120674113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
tx.15709	chr5	-	2442	4	FSM	ENSMUSG00000029600.11	ENSMUST00000177800.8	1668	4	-774	0	-774	0	multi-exon	FALSE	canonical	2	9	junction_3	33.2365260920372	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTAGTGTGTTACTTTTT	5541	False	NA	NA	False	NA	NA	NA	120751428	120747122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_120748028_120749442_120749795_120750044_120750140_120750338
tx.1571	chr10	+	4127	18	FSM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	3	0	3	0	multi-exon	FALSE	canonical	3	50	junction_14	9.76718607764962	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	NA	NA	NA	62816023	62849734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
tx.15710	chr5	-	2340	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	-771	4	-771	-4	multi-exon	FALSE	canonical	3	77	junction_2	1.5	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGGTAGTGTGTTACT	5544	False	NA	NA	False	NA	NA	NA	120751425	120747126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_120748028_120749442_120749795_120750338
tx.15711	chr5	+	2989	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	369	964	-19	1	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	1059	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGAGTGTGGCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	120751172	120765693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
tx.15712	chr5	+	3243	21	FSM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	7	1	7	-1	multi-exon	TRUE	canonical	3	12	junction_7	7.30479294709987	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGTGACGTGTTAAAATC	NA	False	NA	NA	False	NA	NA	NA	120787259	120817661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
tx.15713	chr5	+	2472	15	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	12981	2	8802	-2	3prime_fragment	FALSE	canonical	3	12	junction_1	6.35393177328745	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCGTGACGTGTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	120800233	120817660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
tx.15714	chr5	+	1361	6	NNC	ENSMUSG00000029602.12	novel	486	2	NA	NA	-3837	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	10.6282642044691	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGTGACGTGTTAAAATC	142	False	NA	NA	False	NA	NA	NA	120812820	120817661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_120813041_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
tx.15715	chr5	-	3003	9	NNC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	-750	17	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	41.4123698307643	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGAGGGTGCTGGGTGAC	NA	False	NA	NA	False	NA	NA	NA	120834218	120818249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120833903
tx.15716	chr5	-	1755	5	ISM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	12269	0	-219	0	3prime_fragment	FALSE	canonical	3	95	junction_3	13.57156954814	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	NA	False	NA	NA	NA	120821199	120818267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125
tx.15717	chr5	-	1903	6	ISM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	11949	0	-539	0	3prime_fragment	FALSE	canonical	3	95	junction_3	14.7051011557214	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	NA	False	NA	NA	NA	120821519	120818267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359
tx.15718	chr5	-	2672	8	FSM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	289	0	289	0	multi-exon	FALSE	canonical	3	45	junction_7	31.3453443472057	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	NA	False	NA	NA	NA	120833179	120818267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474
tx.15719	chr5	-	2776	9	NNC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	-1090	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	41.4123698307643	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	NA	False	NA	NA	NA	120834558	120818267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120834452
tx.1572	chr10	+	4352	2	ISM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	29306	-38	7291	38	3prime_fragment	FALSE	canonical	3	75	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTTGTATCTGCTTA	NA	False	NA	NA	False	NA	NA	NA	62845326	62849772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_62847275_62847368
tx.15720	chr5	-	2631	8	ISM	ENSMUSG00000032661.10	ENSMUST00000044833.9	4720	16	15896	0	-4110	0	3prime_fragment	FALSE	canonical	1	3	junction_5	2.43276948084663	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTGGTTGTGATG	7691	False	NA	NA	False	NA	NA	NA	120899830	120891162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_120892441_120892620_120892769_120894091_120894331_120894969_120895146_120896777_120897064_120897985_120898160_120899189_120899335_120899645
tx.15721	chr5	+	2032	7	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25826	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.7487796249151	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	NA	False	NA	NA	NA	121026772	121059711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_121026862_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
tx.15722	chr5	-	3273	4	ISM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	5665	461	5665	-461	3prime_fragment	FALSE	canonical	3	208	junction_1	206.71128550603	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGAACTCTGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	121039919	121034779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135
tx.15723	chr5	-	1196	6	ISM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	1635	463	1635	-463	3prime_fragment	FALSE	canonical	3	208	junction_1	176.329918051362	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	121043949	121034781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658
tx.15724	chr5	-	1410	7	FSM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	12	463	12	-463	multi-exon	FALSE	canonical	3	208	junction_1	161.447015732372	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	121045572	121034781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
tx.15725	chr5	-	4026	5	FSM	ENSMUSG00000043733.15	ENSMUST00000148871.2	737	5	18	-3307	18	0	multi-exon	TRUE	canonical	3	95	junction_4	2.38484800354236	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCATTTGGTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	121281680	121268595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624
tx.15726	chr5	-	5614	16	FSM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	-18	3	-18	-1	multi-exon	FALSE	canonical	3	69	junction_6	9.90263713473448	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTCATTTGGTCTGT	834	False	NA	NA	False	NA	NA	NA	121329478	121268598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
tx.15727	chr5	+	945	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	51	274	11	1	multi-exon	FALSE	canonical	3	7748	junction_1	3319.97705815367	3303	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	121342594	121347030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
tx.15728	chr5	+	926	6	ISM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	923	274	-5	1	3prime_fragment	FALSE	canonical	3	14010	junction_2	1238.46727853424	1349	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	121343466	121347030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
tx.15729	chr5	+	1303	2	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	-4	113857	-4	-44729	5prime_fragment	FALSE	canonical	3	14	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGAGTTCTCACCTGGTC	4311	False	NA	NA	False	NA	NA	NA	121358277	121392783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_121358721_121391923
tx.1573	chr10	-	1528	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	143.298789980504	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5784	False	NA	NA	False	NA	NA	NA	62859670	62851206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859416
tx.15730	chr5	+	5252	16	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	128688	14	28884	-14	3prime_fragment	FALSE	canonical	3	9	junction_4	5.76734100103524	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGACCTAAGAGTCTGT	3179	False	NA	NA	False	NA	NA	NA	121486969	121506626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
tx.15731	chr5	+	3937	13	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	133657	16	33853	-16	3prime_fragment	FALSE	canonical	3	9	junction_1	6.11634876558084	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACTGACCTAAGAGTCT	8148	False	NA	NA	False	NA	NA	NA	121491938	121506624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
tx.15732	chr5	-	2491	12	FSM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	11	1	8	-1	multi-exon	FALSE	canonical	3	16	junction_2	8.79894809640935	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGATTCTTTCTATA	3580	False	NA	NA	False	NA	NA	NA	121523684	121509788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
tx.15733	chr5	-	2487	12	FSM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	-58	-4	0	-1	multi-exon	FALSE	canonical	3	6	junction_2	10.9499235817553	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGATTCTTTCTATA	3572	False	NA	NA	False	NA	NA	NA	121523692	121509788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121510476_121510665_121510739_121511212_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
tx.15734	chr5	+	5401	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	45	1	-13	-1	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	493	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCAGGTTTGTTGAGAC	NA	False	NA	NA	False	NA	NA	NA	121536043	121580471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
tx.15735	chr5	-	1255	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	20	3929	1	3	multi-exon	FALSE	canonical	3	820	junction_1	20.5	496	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTTTTTAGATA	3232	False	NA	NA	False	NA	NA	NA	121590549	121582815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121583636_121585203_121585343_121590253
tx.15736	chr5	+	1385	11	FSM	ENSMUSG00000029452.19	ENSMUST00000094357.11	1366	11	4	-23	4	3	multi-exon	FALSE	canonical	3	13	junction_1	4.13400532171888	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGCGTCATTTGCAA	NA	False	NA	NA	False	NA	NA	NA	121601218	121633480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121620395_121620501_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
tx.15737	chr5	-	2035	14	FSM	ENSMUSG00000029454.16	ENSMUST00000031410.14	2234	14	187	12	187	-2	multi-exon	FALSE	canonical	0	0	junction_9	50.8494703910793	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTTAAAGTTGCTATA	NA	False	NA	NA	False	NA	NA	NA	121683781	121663112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
tx.15738	chr5	-	1931	15	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	65.054294435416	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	NA	False	NA	NA	NA	121683987	121663114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683473_121683780
tx.15739	chr5	-	1967	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	221	1679	-21	172	multi-exon	TRUE	canonical	3	476	junction_10	93.9036148872283	330	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGGGGTCAGTTCTCTA	NA	False	NA	NA	False	NA	NA	NA	121731666	121705768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
tx.1574	chr10	-	1318	9	FSM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	318	-3	-5	3	multi-exon	FALSE	canonical	3	177	junction_7	118.49762655851	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTGCTACTTTTTAT	5776	False	NA	NA	False	NA	NA	NA	62859678	62851203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859498
tx.15740	chr5	-	3807	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-35	-2	intron_retention	FALSE	canonical	0	0	junction_1	16.4723660405907	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGCTTCTTGATCATG	NA	False	NA	NA	False	NA	NA	NA	121757036	121734839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752350_121756833
tx.15741	chr5	-	3753	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	1	intron_retention	FALSE	canonical	0	0	junction_1	13.7846483061999	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTTGATCATGATG	NA	False	NA	NA	False	NA	NA	NA	121757006	121734836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
tx.15742	chr5	-	2355	11	FSM	ENSMUSG00000042647.14	ENSMUST00000041252.13	3881	11	29	1497	29	-1367	multi-exon	FALSE	canonical	3	24	junction_8	9.91413132856328	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGGCTTTCCCAGT	NA	False	NA	NA	False	NA	NA	NA	121756972	121736334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
tx.15743	chr5	-	3635	21	FSM	ENSMUSG00000029456.13	ENSMUST00000111770.2	3626	21	-7	-2	-7	0	multi-exon	FALSE	canonical	3	24	junction_2	12.9348366823861	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTGAGCTAGATTT	NA	False	NA	NA	False	NA	NA	NA	121798584	121759088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
tx.15744	chr5	-	3773	22	NNC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	16.1115724384651	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTGAGCTAGATTT	NA	False	NA	NA	False	NA	NA	NA	121798590	121759088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121794513_121794646_121798355
tx.15745	chr5	+	1171	4	ISM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	7	21624	-4	-9	5prime_fragment	FALSE	canonical	3	161	junction_3	9.97775303139718	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACAATTACATTGGCC	914	False	NA	NA	False	NA	NA	NA	121798632	121803695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161
tx.15746	chr5	+	3726	12	FSM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	7	11	-4	0	multi-exon	TRUE	canonical	3	111	junction_6	24.4408545656822	230	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTACGTTTGAGTCT	914	False	NA	NA	False	NA	NA	NA	121798632	121825308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
tx.15747	chr5	+	4050	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	57.0768837723033	111	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	835	False	NA	NA	False	NA	NA	NA	121849864	121953013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
tx.15748	chr5	+	6771	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-58	-3	intron_retention	FALSE	canonical	0	0	junction_9	56.2918778351201	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATACCCAGTTAGTGTGT	835	False	NA	NA	False	NA	NA	NA	121849864	121953009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447
tx.15749	chr5	+	4339	25	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	125	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.075703112182	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCCAGTTAGTGTGTGT	767	False	NA	NA	False	NA	NA	NA	121849796	121953011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
tx.1575	chr10	-	1447	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	4	762	4	2	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5785	False	NA	NA	False	NA	NA	NA	62859669	62851204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
tx.15750	chr5	+	4110	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.5151447085683	38	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	829	False	NA	NA	False	NA	NA	NA	121849858	121953013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
tx.15751	chr5	+	4204	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	57.6288233911142	113	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	850	False	NA	NA	False	NA	NA	NA	121849879	121953013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
tx.15753	chr5	-	4320	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	42	-167	0	7	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGATCTCTGCATCCACA	NA	False	NA	NA	False	NA	NA	NA	121974880	121953543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
tx.15754	chr5	-	4327	7	FSM	ENSMUSG00000042594.17	ENSMUST00000136960.8	4313	7	-7	-7	-7	7	multi-exon	FALSE	canonical	3	25	junction_6	11.6535640709422	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGATCTCTGCATCCACA	NA	False	NA	NA	False	NA	NA	NA	121974895	121953543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
tx.15755	chr5	-	4064	8	NIC	ENSMUSG00000042594.17	novel	2530	8	NA	NA	-29	5	intron_retention	FALSE	canonical	3	8	junction_7	16.67088382021	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGATCTCTGCATCCA	NA	False	NA	NA	False	NA	NA	NA	121975738	121953545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
tx.15756	chr5	-	4273	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	-10	-1733	-1	5	multi-exon	FALSE	canonical	3	25	junction_7	11.8252583351856	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGATCTCTGCATCCA	NA	False	NA	NA	False	NA	NA	NA	121974923	121953545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
tx.15757	chr5	+	2324	3	FSM	ENSMUSG00000044134.10	ENSMUST00000198271.5	2335	3	-14	25	-14	8	multi-exon	FALSE	canonical	2	8	junction_1	19.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTATTATTGTTCTC	5399	False	NA	NA	False	NA	NA	NA	121987032	121992670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_121987188_121989230_121989343_121990613
tx.15758	chr5	+	2382	4	FSM	ENSMUSG00000044134.10	ENSMUST00000056654.8	2368	4	-9	-5	2	5	multi-exon	FALSE	canonical	3	24	junction_1	9.62635271879577	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGGTGTATTATTGTT	5415	False	NA	NA	False	NA	NA	NA	121987048	121992667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_121987188_121988532_121988610_121989230_121989343_121990613
tx.15759	chr5	-	4207	15	ISM	ENSMUSG00000042589.19	ENSMUST00000168288.9	4697	21	40861	-100	-9736	8	3prime_fragment	FALSE	canonical	2	5	junction_5	3.41141541035987	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGCTGTTTTGATATTAG	NA	False	NA	NA	False	NA	NA	NA	122022123	121998270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069
tx.1576	chr10	-	1402	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	4	762	4	2	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5785	False	NA	NA	False	NA	NA	NA	62859669	62851204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
tx.15760	chr5	+	2362	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	18	4	18	0	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	1690	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	122296358	122313332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
tx.15761	chr5	+	1499	8	FSM	ENSMUSG00000004455.17	ENSMUST00000086294.11	1442	8	-61	4	17	0	multi-exon	FALSE	canonical	3	517	junction_7	836.265410461711	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	122296357	122313332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117_122312179_122313042
tx.15762	chr5	+	2208	7	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	18	2	intron_retention	FALSE	canonical	3	215	junction_5	1006.08571812854	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	122296358	122313330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122310867_122311208_122311344_122312117
tx.15763	chr5	+	2255	6	ISM	ENSMUSG00000004455.17	ENSMUST00000197730.2	923	7	-295	-173	20	0	intron_retention	FALSE	canonical	3	39	junction_3	1111.91988920066	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	122296360	122313332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_122296679_122306237_122306370_122306981_122307213_122310794_122311019_122311208_122311344_122312117
tx.15764	chr5	+	6027	4	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	20	0	intron_retention	FALSE	canonical	3	2504	junction_1	202.501577497285	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	122296360	122313332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_122296679_122306237_122306370_122306981_122311344_122312117
tx.15765	chr5	+	2548	6	FSM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	-56	0	22	0	multi-exon	FALSE	canonical	3	2504	junction_1	193.218425622403	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	122296362	122313332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
tx.15766	chr5	+	2956	8	NIC	ENSMUSG00000064267.14	novel	2805	7	NA	NA	-29	-23	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	18.6153327191565	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTCATGGGGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	122344837	122380337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_122345220_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
tx.15767	chr5	+	2641	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	125	24	-55	-24	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCATGGGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	122347916	122380336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
tx.15768	chr5	-	2300	13	NNC	ENSMUSG00000038593.19	novel	5717	14	NA	NA	-14	53	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.1952370824978	34	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGTGCTGGCTGTATA	NA	False	NA	NA	False	NA	NA	NA	122402492	122379296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122389653_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
tx.15769	chr5	+	4630	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	12	2	12	-2	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	371	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCACTCCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	122422439	122462342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
tx.1577	chr10	-	2305	4	FSM	ENSMUSG00000020067.9	ENSMUST00000218978.2	1833	4	10	-482	10	0	multi-exon	FALSE	canonical	3	18	junction_3	3.29983164553722	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCATG	NA	False	NA	NA	False	NA	NA	NA	62958453	62951573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680
tx.15770	chr5	+	3781	5	ISM	ENSMUSG00000038582.16	ENSMUST00000119015.2	2233	6	12368	-1632	12368	-309	3prime_fragment	FALSE	canonical	3	149	junction_1	10.0840220150494	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGACATTTGGATTCTA	NA	False	NA	NA	False	NA	NA	NA	122446202	122462035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
tx.15771	chr5	-	3491	12	NIC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	5	-3	intron_retention	FALSE	canonical	3	7	junction_10	5.41653422173318	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGAGTGCTTACATTG	9998	False	NA	NA	False	NA	NA	NA	122492290	122461288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
tx.15772	chr5	-	1604	11	FSM	ENSMUSG00000038569.14	ENSMUST00000049009.7	1631	11	29	-2	16	0	multi-exon	FALSE	canonical	3	7	junction_9	5.37494186015067	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGTCATTTTATATA	9951	False	NA	NA	False	NA	NA	NA	122492267	122463568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
tx.15773	chr5	+	993	4	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.8626423516	154	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTGAAAACCTGTGT	714	False	NA	NA	False	NA	NA	NA	122492466	122501351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_122492540_122498067_122498268_122500098_122500335_122500867
tx.15774	chr5	+	983	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	36	1697	-1	1	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	479	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTGAAAACCTGTG	715	False	NA	NA	False	NA	NA	NA	122492467	122501350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
tx.15775	chr5	+	4080	3	ISM	ENSMUSG00000029462.19	ENSMUST00000118830.8	1014	5	2459	-1	-783	1	3prime_fragment	FALSE	canonical	3	2105	junction_2	106	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTGAAAACCTGTG	3154	False	NA	NA	False	NA	NA	NA	122494906	122501350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_122498268_122500098_122500335_122500867
tx.15776	chr5	-	1396	7	FSM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	223	junction_4	23.7235232534199	145	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTTTAAATTATCTTT	NA	False	NA	NA	False	NA	NA	NA	122510435	122502642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945
tx.15777	chr5	+	1540	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	52	0	-24	0	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	127	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8091	False	NA	NA	False	NA	NA	NA	122510565	122520965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
tx.15778	chr5	+	868	7	FSM	ENSMUSG00000029465.15	ENSMUST00000102525.11	899	7	30	1	-14	-1	multi-exon	FALSE	canonical	3	554	junction_4	26.4638117687784	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACACTGTACCGTGTAT	4518	False	NA	NA	False	NA	NA	NA	122529970	122544241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122530061_122534879_122534980_122539709_122539787_122541421_122541491_122542186_122542314_122543146_122543242_122543931
tx.15779	chr5	+	2275	11	FSM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	16	460	16	-460	multi-exon	FALSE	canonical	3	226	junction_7	29.6310647800581	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGAGACTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	122560522	122582515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
tx.1578	chr10	-	4848	19	ISM	ENSMUSG00000020067.9	ENSMUST00000095580.3	5246	20	10847	-15	10847	15	3prime_fragment	TRUE	canonical	1	2	junction_11	6.62114085130648	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	NA	False	NA	NA	False	NA	NA	NA	63028884	62951558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62981614_62981988_62983655_62983773_62985801_62985826_62988573_62988716_62998000_62998073_62999291_62999404_63003011_63003064_63005033_63005210_63028165
tx.15780	chr5	+	3631	10	FSM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	-32	0	5	0	multi-exon	FALSE	canonical	3	226	junction_7	31.1071426040332	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGTGTTTTGCCTGCA	NA	False	NA	NA	False	NA	NA	NA	122560511	122581497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352
tx.15781	chr5	-	2142	7	ISM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	41304	-12	40696	12	3prime_fragment	FALSE	canonical	3	1133	junction_2	88.3032967800309	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	NA	False	NA	NA	False	NA	NA	NA	122598984	122594390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703
tx.15782	chr5	-	4540	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-42	-12	-42	12	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1551	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7235	False	NA	NA	False	NA	NA	NA	122640330	122594390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
tx.15783	chr5	-	2847	18	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	14.5402436403627	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCTCTTTTTACTTCA	1240	False	NA	NA	False	NA	NA	NA	122752584	122688268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122749005_122749171_122752500
tx.15784	chr5	-	2950	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	-3	3	-3	1	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTCTCTTTTTACTTC	1240	False	NA	NA	False	NA	NA	NA	122752584	122688269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
tx.15785	chr5	+	4921	13	FSM	ENSMUSG00000029468.18	ENSMUST00000100737.10	4936	13	14	1	-14	-1	multi-exon	TRUE	canonical	3	11	junction_11	5.09015935135848	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGAATTCTCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	122781987	122822351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
tx.15786	chr5	+	1900	11	FSM	ENSMUSG00000029470.16	ENSMUST00000081554.13	1887	11	-13	0	1	0	multi-exon	FALSE	canonical	3	9	junction_5	30.411182153938	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	122845633	122867107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
tx.15787	chr5	+	1989	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	19	694	-6	0	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	122845625	122867107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
tx.15788	chr5	-	2041	13	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	7	2732	7	-2732	5prime_fragment	FALSE	canonical	3	28	junction_4	15.8190725251374	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGGAATGTCACTCAGT	4640	False	NA	NA	False	NA	NA	NA	122917455	122881413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
tx.15789	chr5	-	1147	5	FSM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	-63	0	-6	0	multi-exon	FALSE	canonical	3	71	junction_1	7.3824115301167	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTTAGCAGTGTCTT	4644	False	NA	NA	False	NA	NA	NA	122917451	122894338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
tx.1579	chr10	+	4014	26	FSM	ENSMUSG00000020064.10	ENSMUST00000219577.2	3914	26	-101	1	-7	-1	multi-exon	FALSE	canonical	3	20	junction_16	90.360929610092	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	NA	False	NA	NA	NA	63079600	63153656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
tx.15790	chr5	-	2449	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	47	264	2	0	multi-exon	TRUE	canonical	3	1165	junction_8	284.126264845403	1746	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	122959355	122925785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
tx.15791	chr5	-	2410	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	2	-8	2	0	multi-exon	FALSE	canonical	3	855	junction_8	345.39967790952	1219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	122959355	122925785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
tx.15792	chr5	+	1967	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	127	2346	18	-2346	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	641	False	NA	NA	False	NA	NA	NA	122988237	123007008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
tx.15793	chr5	-	3543	12	FSM	ENSMUSG00000029475.18	ENSMUST00000031435.14	3532	12	-11	0	-11	0	multi-exon	FALSE	canonical	3	252	junction_11	40.2726246663991	428	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8583	False	NA	NA	False	NA	NA	NA	123038429	123008730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
tx.15794	chr5	-	3645	13	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-30	0	intron_retention	FALSE	canonical	3	58	junction_12	99.7441170640599	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	NA	NA	NA	123060200	123008730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
tx.15795	chr5	+	1639	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	-54	290	-54	10	multi-exon	FALSE	canonical	3	186	junction_1	0	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCTCATGTCTGTGT	4820	False	NA	NA	False	NA	NA	NA	123153082	123168229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_123153630_123167137
tx.15796	chr5	+	2609	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	11	-456	11	456	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGGCAGCCGGCCAC	NA	False	NA	NA	False	NA	NA	NA	123214348	123256268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
tx.15797	chr5	+	3040	9	ISM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	24	417	24	323	intron_retention	FALSE	canonical	3	93	junction_3	11.8506328944913	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTCTCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	123214361	123255395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162
tx.15798	chr5	+	3272	5	ISM	ENSMUSG00000038384.17	ENSMUST00000163030.9	8857	17	19624	16	-892	-16	3prime_fragment	TRUE	canonical	0	0	junction_1	2.58602010819715	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTTTCTTACAGCT	NA	False	NA	NA	False	NA	NA	NA	123299879	123306676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_123299981_123301216_123301349_123301434_123301555_123301633_123301772_123303895
tx.15799	chr5	+	1363	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	64	1170	-4	434	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCTGTCAGTATATT	NA	False	NA	NA	False	NA	NA	NA	123366316	123387024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
tx.1580	chr10	+	3989	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-88	-3	-6	-1	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	387	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	NA	False	NA	NA	NA	63079601	63153656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
tx.15800	chr5	+	1262	5	NIC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	-6	434	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	81.8183964643649	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCTGTCAGTATATT	NA	False	NA	NA	False	NA	NA	NA	123366314	123387024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_123366508_123377604_123377814_123379894_123379997_123384256_123384346_123386355
tx.15801	chr5	+	3783	6	FSM	ENSMUSG00000029438.10	ENSMUST00000031391.9	4718	6	25	910	25	0	multi-exon	FALSE	canonical	3	24	junction_2	4.53431361950185	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGGCTGAGCCCATT	NA	False	NA	NA	False	NA	NA	NA	123482535	123512145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080
tx.15802	chr5	+	7298	17	FSM	ENSMUSG00000038342.16	ENSMUST00000068237.12	7303	17	1	4	1	-1	multi-exon	TRUE	canonical	3	7	junction_15	14.8438486838825	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGTTGTTCTGTGTGAC	NA	False	NA	NA	False	NA	NA	NA	123532863	123595991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_123533406_123578098_123578206_123578875_123578962_123580344_123580435_123580790_123580833_123581092_123581265_123581938_123582029_123582507_123582600_123583530_123584186_123585240_123585363_123585481_123585639_123587352_123587478_123587958_123588058_123588158_123588287_123588489_123588614_123590600_123590731_123591454
tx.15803	chr5	-	2221	5	ISM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	44	0	1	0	intron_retention	FALSE	canonical	3	603	junction_3	28.8736471544556	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTTTCAGAATTGTT	8966	False	NA	NA	False	NA	NA	NA	123662195	123649767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317
tx.15804	chr5	-	1540	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	30	6	-3	-6	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	366	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGGACCAGTTTTCAGA	8952	False	NA	NA	False	NA	NA	NA	123662209	123649773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
tx.15805	chr5	-	6673	4	FSM	ENSMUSG00000029433.17	ENSMUST00000145152.8	2588	4	0	-4085	0	-13	multi-exon	FALSE	canonical	3	603	junction_1	60.8659729788875	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACCACCAGGGACCAGT	8962	False	NA	NA	False	NA	NA	NA	123662199	123649780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123656129_123658103_123658236_123661317_123661445_123662133
tx.15806	chr5	-	6376	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	-14	-5681	-4	-200	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTTCAGGCTGT	8951	False	NA	NA	False	NA	NA	NA	123662210	123649967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
tx.15807	chr5	-	3762	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	30	443	-29	-443	multi-exon	TRUE	canonical	3	140	junction_1	30.3840007240653	439	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	9997	False	NA	NA	False	NA	NA	NA	123711071	123667164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
tx.15808	chr5	-	4365	12	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-29	-443	intron_retention	FALSE	canonical	3	161	junction_1	28.1134067014945	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	9997	False	NA	NA	False	NA	NA	NA	123711071	123667164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
tx.15809	chr5	-	5625	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111564.8	5609	24	-24	8	-21	4	multi-exon	FALSE	canonical	3	15	junction_9	12.9445523936893	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGGTTGGTTGGTTG	9881	False	NA	NA	False	NA	NA	NA	123822409	123715865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
tx.1581	chr10	-	3900	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	-2	7	1	-7	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	431	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTTAACTTCCATTGTT	NA	False	NA	NA	False	NA	NA	NA	63174813	63154792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
tx.15810	chr5	-	7873	25	NIC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-16	0	intron_retention	FALSE	canonical	3	18	junction_16	11.5125987750618	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATGTTTTGGGTCTCT	9886	False	NA	NA	False	NA	NA	NA	123822404	123715880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
tx.15811	chr5	-	8124	25	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	32	junction_10	10.473428680873	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTGGTTGGTTGGTTTT	9883	False	NA	NA	False	NA	NA	NA	123822407	123715860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
tx.15812	chr5	-	5860	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111566.9	6133	24	272	1	-21	-1	multi-exon	FALSE	canonical	3	15	junction_9	12.0135399352954	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTTGGTTGGTTTTTG	9881	False	NA	NA	False	NA	NA	NA	123822409	123715858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
tx.15813	chr5	-	4524	10	ISM	ENSMUSG00000049550.18	ENSMUST00000154672.2	3544	12	2779	-1654	2420	-2	3prime_fragment	FALSE	canonical	3	39	junction_9	7.65135346697192	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGGTTGGTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	123753106	123715859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130
tx.15814	chr5	-	2777	14	NNC	ENSMUSG00000029427.12	novel	4350	14	NA	NA	46	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	111.512569939168	639	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAGACTTGGGTAGAT	6443	False	NA	NA	False	NA	NA	NA	123859061	123837828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857599_123858785
tx.15815	chr5	-	2254	11	FSM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	-28	-541	-10	0	multi-exon	FALSE	canonical	3	100	junction_10	161.696753214157	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	4336	False	NA	NA	False	NA	NA	NA	123887462	123866488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123887351
tx.15816	chr5	-	2336	12	FSM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	8	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	200.336700053759	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	4354	False	NA	NA	False	NA	NA	NA	123887444	123866488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
tx.15817	chr5	-	2157	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	15	-577	-10	0	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	4336	False	NA	NA	False	NA	NA	NA	123887462	123866492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
tx.15818	chr5	+	6955	64	FSM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	0	6	0	-4	multi-exon	FALSE	canonical	3	266	junction_8	72.5550989140863	326	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATGTTGGTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	123887788	123959650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
tx.15819	chr5	+	2390	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-10	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	684.091353250307	29	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGTGAAGTTAAAAATG	9062	False	NA	NA	False	NA	NA	NA	124045321	124066875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_124045430_124046162_124046278_124046446_124046606_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
tx.1582	chr10	-	3778	8	FSM	ENSMUSG00000020063.17	ENSMUST00000105442.3	3740	8	5	-43	2	-8	multi-exon	FALSE	canonical	3	29	junction_7	79.0360289839452	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTTAACTTCCATTGT	NA	False	NA	NA	False	NA	NA	NA	63174809	63154793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63174343
tx.15820	chr5	+	997	7	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-11	463	combination_of_known_splicesites	FALSE	canonical	3	116	junction_2	529.179684879237	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTCTCTTTTTT	9061	False	NA	NA	False	NA	NA	NA	124045320	124065659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_124045430_124046162_124046278_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
tx.15821	chr5	+	1013	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	87	1239	-7	463	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	600	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTCTCTTTTTT	9065	False	NA	NA	False	NA	NA	NA	124045324	124065659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
tx.15822	chr5	+	4376	32	FSM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	10	2349	10	1521	multi-exon	TRUE	canonical	3	34	junction_6	6.64046185222248	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGAGGGCCTCTGCCAGA	NA	False	NA	NA	False	NA	NA	NA	124111700	124141272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
tx.15823	chr5	-	2527	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	122	junction_3	15.8394724940223	265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	2231	False	NA	NA	False	NA	NA	NA	124170338	124142703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
tx.15824	chr5	+	1573	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	20	3	-4	-3	multi-exon	TRUE	canonical	3	59	junction_5	17.423642940939	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTTTGCTATTATT	NA	False	NA	NA	False	NA	NA	NA	124250379	124253543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
tx.15825	chr5	+	1481	7	FSM	ENSMUSG00000023707.14	ENSMUST00000119269.6	1474	7	-3	-4	-3	-3	multi-exon	FALSE	canonical	2	14	junction_5	31.3421973277773	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTTTGCTATTATT	NA	False	NA	NA	False	NA	NA	NA	124250380	124253543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252541_124252709_124252777
tx.15826	chr5	+	1763	6	NIC	ENSMUSG00000023707.14	novel	1596	7	NA	NA	1	-3	intron_retention	FALSE	canonical	3	73	junction_4	13.9914259459142	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTTTGCTATTATT	NA	False	NA	NA	False	NA	NA	NA	124250384	124253543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252709_124252777
tx.15827	chr5	+	1198	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	-6	0	4	0	multi-exon	FALSE	canonical	3	507	junction_1	46.874833333037	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	NA	False	NA	NA	NA	124254155	124256259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
tx.15828	chr5	-	7195	26	NIC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	8.21179639299465	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	8137	False	NA	NA	False	NA	NA	NA	124387904	124256752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
tx.15829	chr5	-	7007	25	FSM	ENSMUSG00000029406.16	ENSMUST00000162812.8	6952	25	-55	0	-55	0	multi-exon	FALSE	canonical	3	6	junction_8	7.71857427825171	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	8163	False	NA	NA	False	NA	NA	NA	124387878	124256752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
tx.1583	chr10	+	1259	5	FSM	ENSMUSG00000036764.13	ENSMUST00000043317.7	3025	5	17	1749	9	0	multi-exon	TRUE	canonical	3	25	junction_2	1.58113883008419	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGCATTTAGGATGCAA	NA	False	NA	NA	False	NA	NA	NA	63222358	63244606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_63222555_63231563_63231643_63233017_63233158_63242780_63242986_63243967
tx.15830	chr5	-	1998	11	NIC	ENSMUSG00000029406.16	novel	1690	10	NA	NA	-84	-5	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	9.73447481891037	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCCGCTTCAGGGG	8134	False	NA	NA	False	NA	NA	NA	124387907	124270872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_124271039_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
tx.15831	chr5	-	7079	19	ISM	ENSMUSG00000038126.18	ENSMUST00000031344.13	7747	22	12139	0	9294	0	3prime_fragment	FALSE	canonical	3	34	junction_11	6.88642429031009	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	NA	False	NA	NA	NA	124453896	124389021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435
tx.15832	chr5	-	7734	23	FSM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	-17	-2709	1	0	multi-exon	FALSE	canonical	3	20	junction_21	8.45259019423842	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	NA	False	NA	NA	NA	124465932	124389021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
tx.15833	chr5	-	7690	23	FSM	ENSMUSG00000038126.18	ENSMUST00000147737.8	5959	23	-22	-1709	-1	-2	multi-exon	FALSE	canonical	3	31	junction_21	7.18368790391303	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCGTGGTATCTGTGA	NA	False	NA	NA	False	NA	NA	NA	124465934	124389023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
tx.15834	chr5	+	1638	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	39	0	39	0	multi-exon	FALSE	canonical	3	74	junction_1	7.5	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCGAGGAAGCTGTGG	5437	False	NA	NA	False	NA	NA	NA	124466199	124479907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124466293_124476689_124476999_124478671
tx.15835	chr5	-	5338	3	FSM	ENSMUSG00000029394.12	ENSMUST00000111473.8	715	3	-4318	-305	99	-22	multi-exon	FALSE	canonical	3	1213	junction_1	38.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTATTACGATGTGG	4353	False	NA	NA	False	NA	NA	NA	124492635	124483501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124484218_124486663_124486791_124488140
tx.15836	chr5	-	1336	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	-43	22	-43	-22	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	722	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTATTACGATGTGG	4211	False	NA	NA	False	NA	NA	NA	124492777	124483501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
tx.15837	chr5	-	7853	16	ISM	ENSMUSG00000038095.16	ENSMUST00000168651.6	4170	31	20533	-5803	-1578	-21	3prime_fragment	FALSE	canonical	3	453	junction_10	53.0389374788833	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATTAAACAAATGC	9031	False	NA	NA	False	NA	NA	NA	124532057	124506791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863
tx.15838	chr5	-	5684	32	FSM	ENSMUSG00000038095.16	ENSMUST00000065263.12	10071	32	-72	4459	15	1371	multi-exon	TRUE	canonical	3	24	junction_31	128.473127279141	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGACTCTTGTTTAGG	NA	False	NA	NA	False	NA	NA	NA	124564049	124511223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563909
tx.15839	chr5	-	2863	13	ISM	ENSMUSG00000038095.16	ENSMUST00000168651.6	4170	31	22491	-1368	380	1368	3prime_fragment	FALSE	canonical	3	453	junction_10	54.4768044420946	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	1251	False	NA	NA	False	NA	NA	NA	124530099	124511226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984
tx.1584	chr10	-	479	2	FSM	ENSMUSG00000097134.3	ENSMUST00000219021.2	388	2	-85	-6	-85	6	multi-exon	FALSE	canonical	3	19	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTCTAACTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66753603	66751408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_66751739_66753454
tx.15840	chr5	-	5590	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-5	1370	combination_of_known_junctions	FALSE	canonical	3	243	junction_29	68.980423954111	403	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	124563661	124511224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
tx.15841	chr5	-	5696	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	11	4454	-6	1370	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	124563662	124511224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
tx.15842	chr5	-	5586	31	NIC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	7	1370	combination_of_known_junctions	FALSE	canonical	3	24	junction_30	107.715283141355	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	124564057	124511224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563909
tx.15843	chr5	+	2751	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	-13	1	-13	-1	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATGTGTTGTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	124577979	124600370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
tx.15844	chr5	+	2785	7	FSM	ENSMUSG00000049327.18	ENSMUST00000100709.7	1425	7	-13	-1347	-13	-1	multi-exon	FALSE	canonical	3	345	junction_1	170.424388578109	621	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATGTGTTGTTGTTGTT	4383	False	NA	NA	False	NA	NA	NA	124583542	124600370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
tx.15845	chr5	+	2912	8	FSM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	-36	-764	-24	-1	multi-exon	FALSE	canonical	3	31	junction_1	287.390653562537	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATGTGTTGTTGTTGTT	4372	False	NA	NA	False	NA	NA	NA	124583531	124600370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124583792_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
tx.15846	chr5	+	2857	7	ISM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	260	-765	-19	0	3prime_fragment	FALSE	canonical	3	338	junction_1	172.952787392012	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	4668	False	NA	NA	False	NA	NA	NA	124583827	124600371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
tx.15847	chr5	-	1387	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	1	3	1	-3	multi-exon	FALSE	canonical	3	23	junction_1	3.55902608401044	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAACGCATGTGTATC	NA	False	NA	NA	False	NA	NA	NA	124616428	124601330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
tx.15848	chr5	+	1102	2	FSM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	13	0	13	0	multi-exon	FALSE	canonical	3	127	junction_1	0	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGAGGTGGGGTTTGT	2233	False	NA	NA	False	NA	NA	NA	124621209	124629187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124621310_124628185
tx.15849	chr5	-	2241	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	6	2	6	-2	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTTCCTGTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	124669448	124631144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
tx.1585	chr10	-	1111	2	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGACTTTCTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	66810458	66805487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_-_66806523_66810382
tx.15850	chr5	-	1303	4	ISM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	6	21342	6	-20758	5prime_fragment	FALSE	canonical	3	33	junction_1	7.11805216802087	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAATGTGTTTTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	124669448	124652484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_124652807_124653580_124653700_124659313_124659465_124668737
tx.15851	chr5	+	1991	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	78	5	78	5	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	1658	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTTTGTGTTTTATAT	NA	False	NA	NA	False	NA	NA	NA	124678835	124688564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
tx.15852	chr5	+	3923	3	NIC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	77	-4	intron_retention	FALSE	canonical	3	3477	junction_1	42	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTGTGTTTTATATT	NA	False	NA	NA	False	NA	NA	NA	124678834	124688565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_124681228_124684958_124685067_124687143
tx.15853	chr5	+	2783	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	14	2	9	-2	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTATCATTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	124690940	124707721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
tx.15854	chr5	-	1765	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	6	-440	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	291.131172111473	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	NA	False	NA	NA	NA	124717089	124708715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124716766
tx.15855	chr5	-	1530	9	FSM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	43	440	-13	-440	multi-exon	FALSE	canonical	0	0	junction_4	226.339761199839	526	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	NA	False	NA	NA	NA	124717151	124708715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
tx.15856	chr5	+	1823	13	FSM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	11	838	9	255	multi-exon	FALSE	canonical	3	570	junction_1	79.1684210331928	549	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	124717213	124734905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
tx.15857	chr5	+	1794	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	10	255	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_2	193.045097638407	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	124717214	124734905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_124717265_124720510_124720591_124722024_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
tx.15858	chr5	+	1901	14	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	-4	255	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	271.182486212518	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	124717224	124734905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_124717265_124720510_124720591_124721585_124721675_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
tx.15859	chr5	+	2418	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	37	280	-1	-280	multi-exon	TRUE	canonical	3	31	junction_8	6.97499240366195	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAGTGTTAAGTGAACG	NA	False	NA	NA	False	NA	NA	NA	124736848	124765523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
tx.1586	chr10	-	5389	9	NNC	ENSMUSG00000019873.9	novel	2925	9	NA	NA	-16	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.3869167005964	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGGCAGCTGAGTATT	NA	False	NA	NA	False	NA	NA	NA	66932740	66844977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_66848265_66848311_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
tx.15860	chr5	+	5328	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	11	6	-2	-6	multi-exon	TRUE	canonical	3	142	junction_14	17.8821937464506	297	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGTGTCTAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	124767127	124801513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
tx.15862	chr5	-	2606	5	NIC	ENSMUSG00000037979.14	novel	809	5	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	82.6177190437983	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTGGTGGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	124939534	124911481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_124913356_124913543_124913631_124916006_124916049_124916724_124916872_124939078
tx.15863	chr5	-	2276	5	NNC	ENSMUSG00000037979.14	novel	2473	4	NA	NA	228	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	83.3756559194589	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTGGTGGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	124939260	124911481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_124913356_124913543_124913575_124916006_124916049_124916724_124916872_124939078
tx.15864	chr5	-	2246	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	227	0	227	0	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTGGTGGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	124939261	124911481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
tx.15865	chr5	+	4070	4	FSM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	22	0	22	0	multi-exon	FALSE	canonical	3	206	junction_3	10.2089285540757	344	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATGTTTCCTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	124939776	124965694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014
tx.15866	chr5	-	8894	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	65	junction_46	20.0123225927316	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	125256282	125094225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
tx.15867	chr5	-	2751	10	ISM	ENSMUSG00000029478.17	ENSMUST00000125053.8	5672	27	15698	9	-190	0	3prime_fragment	FALSE	canonical	3	99	junction_9	17.641141588435	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	2156	False	NA	NA	False	NA	NA	NA	125104178	125094225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865
tx.15869	chr5	-	3321	22	ISM	ENSMUSG00000029478.17	ENSMUST00000111398.8	8808	48	1	30644	1	5	5prime_fragment	FALSE	canonical	3	65	junction_19	15.2093478834087	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGTGTCTTAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	125256282	125124860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
tx.1587	chr10	-	2745	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	-9	2694	-9	-211	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCCCAATTTAATCTTG	NA	False	NA	NA	False	NA	NA	NA	66932733	66847661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
tx.15870	chr5	-	2382	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	-13	-2	10	0	multi-exon	TRUE	canonical	3	487	junction_1	58.8981471316135	470	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	NA	False	NA	NA	NA	125418148	125354150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
tx.15871	chr5	-	2520	13	FSM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	1	0	1	0	multi-exon	FALSE	canonical	3	188	junction_1	171.680966232913	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	NA	False	NA	NA	NA	125418157	125354150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
tx.15872	chr5	-	2345	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	261	12	261	0	multi-exon	FALSE	canonical	3	916	junction_1	0	580	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTTCATTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	125466817	125463040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_125465329_125466760
tx.15873	chr5	-	4214	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	0	546	0	384	multi-exon	TRUE	canonical	3	122	junction_21	17.4191708985502	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	125511185	125491467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
tx.15874	chr5	+	1290	4	FSM	ENSMUSG00000037905.14	ENSMUST00000198811.2	745	4	-171	-374	11	374	multi-exon	FALSE	canonical	3	17	junction_2	166.423823080979	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGGGAACGCTTGA	NA	False	NA	NA	False	NA	NA	NA	125518642	125532164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_125518957_125528733_125528837_125529211_125529310_125531389
tx.15875	chr5	+	1202	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	0	5271	0	373	multi-exon	FALSE	canonical	3	373	junction_1	23.5	232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGAAGGGAACGCTTG	NA	False	NA	NA	False	NA	NA	NA	125518631	125532163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_125518957_125528733_125528837_125531389
tx.15876	chr5	+	3206	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	28	5	28	-5	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCAGTACGCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	125552905	125594469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
tx.15877	chr5	-	2654	8	FSM	ENSMUSG00000029416.18	ENSMUST00000153832.8	2673	8	22	-3	-15	0	multi-exon	FALSE	canonical	3	33	junction_6	28.9418840620514	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	127694460	127672727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127685835_127686126_127693878
tx.15878	chr5	-	2713	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	19	0	-16	0	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	127694461	127672727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
tx.15879	chr5	+	3431	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-18	0	-18	0	multi-exon	TRUE	canonical	3	18	junction_6	12.1383212585269	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATCTGGCTTGAATTGG	8683	False	NA	NA	False	NA	NA	NA	127709307	127786438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
tx.1588	chr10	-	1325	6	NIC	ENSMUSG00000019873.9	novel	838	3	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	65.7346179725721	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTGACATCTTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	66932747	66864704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_66865466_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
tx.15880	chr5	-	2920	11	FSM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	15	4	-10	2	multi-exon	FALSE	canonical	3	41	junction_2	6.30555310817378	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCGTTTGTGCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	129085623	129061624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
tx.15881	chr5	+	1085	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	135	1157	2	-1157	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	5125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	477	False	NA	NA	False	NA	NA	NA	129097267	129100230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
tx.15882	chr5	+	1244	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	22	1157	22	-1157	multi-exon	FALSE	canonical	3	14794	junction_4	293.478040064329	519	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	567	False	NA	NA	False	NA	NA	NA	129097357	129100230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
tx.15883	chr5	+	3334	13	ISM	ENSMUSG00000044017.17	ENSMUST00000056617.14	5163	26	47217	0	47210	0	3prime_fragment	FALSE	canonical	3	14	junction_1	14.247806848775	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTCTTGAGCGTCACA	NA	False	NA	NA	False	NA	NA	NA	129221030	129281663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
tx.15884	chr5	+	3194	12	ISM	ENSMUSG00000044017.17	ENSMUST00000056617.14	5163	26	65843	0	65836	0	3prime_fragment	FALSE	canonical	3	43	junction_2	8.40306909693916	117	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTCTTGAGCGTCACA	4620	False	NA	NA	False	NA	NA	NA	129239656	129281663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
tx.15885	chr5	+	3071	11	NIC	ENSMUSG00000044017.17	novel	4141	25	NA	NA	65837	2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	16.6180624622728	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCTTGAGCGTCACAAT	4621	False	NA	NA	False	NA	NA	NA	129239657	129281665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129239733_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
tx.15886	chr5	+	3453	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_15	22.5492602052145	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCTGGGGCTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	129578293	129648444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
tx.15887	chr5	+	3217	18	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	23.627296395231	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGGGCTCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	129578293	129648445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
tx.15888	chr5	+	3299	18	FSM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	11	3	-8	0	multi-exon	FALSE	canonical	3	56	junction_11	20.649823847033	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGGGCTCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	129578295	129648445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
tx.15889	chr5	+	3386	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	10	-2889	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_8	58.5586126125877	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTTGACAGCTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	129661242	129685274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682715_129682837_129683339
tx.1589	chr10	+	8624	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	34.4406736287199	47	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGATGTTACAGTTCT	NA	False	NA	NA	False	NA	NA	NA	66932085	67092097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
tx.15890	chr5	+	3522	10	FSM	ENSMUSG00000029436.10	ENSMUST00000031390.10	6422	10	11	2889	11	-2889	multi-exon	FALSE	canonical	3	158	junction_6	22.9879195327556	386	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTTGACAGCTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	129661243	129685274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
tx.15891	chr5	-	3934	3	FSM	ENSMUSG00000051034.8	ENSMUST00000049778.7	3929	3	-10	5	-10	-5	multi-exon	TRUE	canonical	3	10	junction_2	2	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAACACATTGAAACAGCC	NA	False	NA	NA	False	NA	NA	NA	129747173	129731661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_129735450_129737833_129737930_129747123
tx.15892	chr5	+	963	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	23	4075	2	1	multi-exon	FALSE	canonical	3	150	junction_2	308.575220435256	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	777	False	NA	NA	False	NA	NA	NA	129792583	129795545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129792614_129792747_129792975_129793790_129793931_129794979
tx.15893	chr5	+	815	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	23	-6	8	6	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCTTGATTTTTCAAAA	783	False	NA	NA	False	NA	NA	NA	129792589	129795550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
tx.15894	chr5	+	1792	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	15	375	8	20	multi-exon	FALSE	canonical	3	460	junction_1	221	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTTATTGTGTGTGT	783	False	NA	NA	False	NA	NA	NA	129792589	129795564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129792614_129792747_129793931_129794979
tx.15895	chr5	+	1677	4	NNC	ENSMUSG00000034211.15	novel	1208	4	NA	NA	-6	22	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	356.816790835608	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTATTGTGTGTGTGT	785	False	NA	NA	False	NA	NA	NA	129792591	129795566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_129792614_129792747_129793676_129793790_129793931_129794979
tx.15896	chr5	+	793	3	FSM	ENSMUSG00000034211.15	ENSMUST00000119985.2	859	3	105	-39	-15	6	multi-exon	FALSE	canonical	3	517	junction_1	192.5	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCTTGATTTTTCAAAA	939	False	NA	NA	False	NA	NA	NA	129792745	129795550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129792828_129793790_129793931_129794979
tx.15897	chr5	+	1755	2	ISM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	171	390	-15	5	3prime_fragment	FALSE	canonical	3	902	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGCTTGATTTTTCAAA	939	False	NA	NA	False	NA	NA	NA	129792745	129795549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_129793931_129794979
tx.15898	chr5	+	933	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121813.8	868	3	124	-189	-15	-1	multi-exon	FALSE	canonical	3	150	junction_1	376	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTGGCAGCTTGATTT	939	False	NA	NA	False	NA	NA	NA	129792745	129795543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129792975_129793790_129793931_129794979
tx.15899	chr5	+	1927	9	NIC	ENSMUSG00000029432.13	novel	1600	11	NA	NA	13	0	intron_retention	FALSE	canonical	2	5	junction_7	123.725439481943	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATGTCTAATTTTTAC	7780	False	NA	NA	False	NA	NA	NA	129802139	129835314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129831905_129831990_129834142
tx.1590	chr10	+	8401	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-80	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	36.3191629477088	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGGATGTTACAGTTC	NA	False	NA	NA	False	NA	NA	NA	66932103	67092096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
tx.15900	chr5	+	2083	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	27	2	-9	-2	multi-exon	FALSE	canonical	3	290	junction_9	37.917389085507	416	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTGCACGATTGAGA	7794	False	NA	NA	False	NA	NA	NA	129802153	129835389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
tx.15901	chr5	-	1151	6	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8201	4	-35	-4	3prime_fragment	FALSE	canonical	3	674	junction_1	180.962537559573	532	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATTCAGTAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	129856312	129842625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
tx.15902	chr5	+	2196	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	376	16	376	-16	multi-exon	TRUE	canonical	3	3618	junction_3	465.957308149311	4356	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTGGATCATTCACA	NA	False	NA	NA	False	NA	NA	NA	129864437	129875196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
tx.15903	chr5	+	1640	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	6	618	6	0	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	365	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	129875832	129892273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
tx.15904	chr5	-	2373	8	ISM	ENSMUSG00000025537.13	ENSMUST00000026617.13	2374	10	4967	0	-11	0	3prime_fragment	FALSE	canonical	3	15	junction_6	2.74791200881019	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTATTGACCTCATAAG	NA	False	NA	NA	False	NA	NA	NA	129902957	129892261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509
tx.15905	chr5	-	731	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	181	3	-16	0	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	1362	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTAGCGTCCTTAT	2245	False	NA	NA	False	NA	NA	NA	129916130	129909999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
tx.15906	chr5	+	184	2	Antisense	novelGene_ENSMUSG00000025537.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCACTCATAAACATTG	667	False	NA	NA	False	NA	NA	NA	129919225	129922812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_+_129919385_129922787
tx.15907	chr5	+	2467	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	25	0	-20	0	multi-exon	FALSE	canonical	3	34	junction_3	2120.04764097414	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	6030	False	NA	NA	False	NA	NA	NA	129924588	129932464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
tx.15908	chr5	+	4771	3	NNC	ENSMUSG00000066735.9	novel	3112	3	NA	NA	49	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	443.5	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTGCTGCCATCGTT	NA	False	NA	NA	False	NA	NA	NA	129970859	130015531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_129970971_130007359_130007470_130010981
tx.15909	chr5	+	4837	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-78	-4109	-60	-4	multi-exon	FALSE	canonical	3	55	junction_1	420.5	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATTGTGCTGCCATCG	NA	False	NA	NA	False	NA	NA	NA	129970889	130015529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129971069_130007359_130007470_130010981
tx.1591	chr10	+	8379	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	38.2079363483557	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	66932253	67092099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
tx.15910	chr5	+	4975	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	81	-1944	-58	-2	multi-exon	FALSE	canonical	3	775	junction_1	60.5	1041	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTGCTGCCATCGTT	NA	False	NA	NA	False	NA	NA	NA	129970891	130015531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129971207_130007359_130007470_130010981
tx.15911	chr5	+	4862	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	-56	3	-56	-3	multi-exon	FALSE	canonical	3	56	junction_1	0	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATTGTGCTGCCATCGT	NA	False	NA	NA	False	NA	NA	NA	129970893	130015530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_129971207_130010981
tx.15912	chr5	+	4725	2	NIC	ENSMUSG00000066735.9	novel	4809	2	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	NA	False	NA	NA	NA	129970895	130015533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129971069_130010981
tx.15913	chr5	+	5331	2	ISM	ENSMUSG00000066735.9	ENSMUST00000202486.2	649	3	852	-4208	852	-4	3prime_fragment	FALSE	canonical	3	896	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATTGTGCTGCCATCG	NA	False	NA	NA	False	NA	NA	NA	130006686	130015529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_130007470_130010981
tx.15914	chr5	-	2505	12	FSM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	182	0	-2	0	multi-exon	TRUE	canonical	3	83	junction_6	16.6092675514317	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130031708	130017851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
tx.15915	chr5	-	1550	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	29	245	-7	1	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	209	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGCATATGCTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	130053193	130040343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
tx.15916	chr5	+	1489	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	6	-3	6	3	multi-exon	FALSE	canonical	3	269	junction_4	51.2382669496149	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCACCATACCTGGTAT	NA	False	NA	NA	False	NA	NA	NA	130058136	130089633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
tx.15917	chr5	+	1385	5	FSM	ENSMUSG00000025532.14	ENSMUST00000202163.4	931	5	3	-457	3	3	multi-exon	FALSE	canonical	3	60	junction_3	138.212472302611	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCACCATACCTGGTAT	NA	False	NA	NA	False	NA	NA	NA	130058145	130089633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130077766_130077825_130088545
tx.15918	chr5	+	2023	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	27	0	27	0	multi-exon	FALSE	canonical	3	139	junction_2	10.899541274751	169	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATGGTCCCGTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	130108237	130164570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
tx.15919	chr5	+	3582	4	FSM	ENSMUSG00000034110.9	ENSMUST00000040616.9	4291	4	19	690	19	-690	multi-exon	FALSE	canonical	3	21	junction_2	1.88561808316413	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTTGGCCTGTTTGATC	1874	False	NA	NA	False	NA	NA	NA	130173720	130183957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_130174068_130176894_130177065_130180511_130180691_130181071
tx.1592	chr10	+	7077	19	ISM	ENSMUSG00000037876.18	ENSMUST00000173689.8	8609	25	33494	-2	1504	2	3prime_fragment	FALSE	canonical	3	73	junction_1	19.885241751263	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	67055022	67092099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
tx.15920	chr5	+	2661	9	FSM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	24	5	-2	0	multi-exon	FALSE	canonical	3	81	junction_3	33.6962535009458	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTGGTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	130200662	130243178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_130200736_130216241_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
tx.15921	chr5	+	2658	9	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	67	junction_3	37.9637985454564	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTGGTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	130200668	130243178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
tx.15922	chr5	+	3568	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	1	1	1	-1	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	665	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGCCGTTTTAATT	9018	False	NA	NA	False	NA	NA	NA	130251176	130272506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
tx.15923	chr5	+	3333	6	ISM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	7111	2	7111	-2	3prime_fragment	FALSE	canonical	3	519	junction_3	19.0094713235271	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTGCCGTTTTAAT	1236	False	NA	NA	False	NA	NA	NA	130258286	130272505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
tx.15924	chr5	-	1505	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	42	1	4	-1	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	552	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTTGCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	130284329	130274572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
tx.15925	chr5	+	2625	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	13	406	13	-406	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	379	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	4941	False	NA	NA	False	NA	NA	NA	130285888	130369998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
tx.15926	chr5	-	6223	14	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	14.1989248697083	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCAGATGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	131567548	131466172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501075_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
tx.15927	chr5	-	6235	14	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-52	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	9.03379584978658	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCAGATGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	131567578	131466172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
tx.15928	chr5	-	6192	14	FSM	ENSMUSG00000029673.20	ENSMUST00000161374.8	4217	14	-12	-1963	-12	-2	multi-exon	FALSE	canonical	3	21	junction_11	11.7397821618248	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCAGATGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	131567538	131466172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
tx.15929	chr5	-	6223	14	NIC	ENSMUSG00000029673.20	novel	3572	17	NA	NA	-20	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	12.2285919687616	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTTCCAGATGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	131567546	131466173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501075_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
tx.1593	chr10	+	5326	17	ISM	ENSMUSG00000037876.18	ENSMUST00000173689.8	8609	25	39173	-2	7183	2	3prime_fragment	FALSE	canonical	3	93	junction_1	16.2821796759525	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	67060701	67092099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
tx.15930	chr5	+	4803	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	3	2561	3	-2548	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	134128552	134170621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
tx.15931	chr5	-	2303	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	2	16	2	-16	multi-exon	FALSE	canonical	3	313	junction_2	26.6850145212627	371	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGTCTTGTAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	134205611	134176908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
tx.15932	chr5	+	3481	16	FSM	ENSMUSG00000015942.10	ENSMUST00000016086.10	3482	16	-2	3	-2	-3	multi-exon	FALSE	canonical	1	3	junction_8	3.05505046330389	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTGTTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	134212863	134246985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_134213098_134220018_134220117_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244977
tx.15933	chr5	-	4354	34	FSM	ENSMUSG00000060261.17	ENSMUST00000111261.12	4381	34	27	0	1	0	multi-exon	TRUE	canonical	3	228	junction_23	69.7198249746108	193	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	662	False	NA	NA	False	NA	NA	NA	134343573	134266690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
tx.15934	chr5	-	3637	31	FSM	ENSMUSG00000023079.15	ENSMUST00000073161.12	3572	31	-67	2	-39	0	multi-exon	FALSE	canonical	3	65	junction_9	54.133743840808	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGCGTCACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	134485609	134386516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
tx.15935	chr5	-	3555	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	-38	7	-38	0	multi-exon	FALSE	canonical	3	127	junction_8	45.8592169193566	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGCGTCACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	134485608	134386516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
tx.15936	chr5	+	1587	12	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	502.73133320734	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATGCTTAATTGCTT	NA	False	NA	NA	False	NA	NA	NA	134611604	134627184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619491_134619620_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
tx.15937	chr5	+	1452	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	66	3477	-1	0	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	905	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	NA	False	NA	NA	NA	134611609	134627182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
tx.15938	chr5	+	3431	10	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	1115	junction_6	101.321271211923	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	NA	False	NA	NA	NA	134611599	134627182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
tx.15939	chr5	-	2413	7	FSM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	158	155	-7	1	multi-exon	FALSE	canonical	3	761	junction_3	647.667803224256	1098	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	2195	False	NA	NA	False	NA	NA	NA	134668186	134648729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
tx.1594	chr10	-	1884	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	73.1619208787376	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAGTATGACTTGTG	NA	False	NA	NA	False	NA	NA	NA	67121073	67102465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_67103946_67105804_67105926_67111348_67111434_67120875
tx.15940	chr5	-	2354	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	14	-1	-8	1	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	2324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	2194	False	NA	NA	False	NA	NA	NA	134668187	134648729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
tx.15941	chr5	-	3350	16	FSM	ENSMUSG00000029674.14	ENSMUST00000015137.10	3331	16	-32	13	-32	-12	multi-exon	FALSE	canonical	2	10	junction_14	3.46794848097065	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGGGCTTGCATCCTCGT	5734	False	NA	NA	False	NA	NA	NA	134717484	134684905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
tx.15942	chr5	+	1940	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	3	865	-2	49	multi-exon	FALSE	canonical	3	37	junction_1	28.2460616723819	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGATCTGATTTATGG	3415	False	NA	NA	False	NA	NA	NA	134961224	134970626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
tx.15943	chr5	+	2141	5	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	3	44	intron_retention	FALSE	canonical	3	98	junction_4	6.17960354715414	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGGGTGATCTGATT	3420	False	NA	NA	False	NA	NA	NA	134961229	134970621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
tx.15944	chr5	+	3249	2	NIC	ENSMUSG00000040557.15	novel	1796	5	NA	NA	3	-158	intron_retention	FALSE	canonical	2	2	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGATGTAGAGCACTT	3420	False	NA	NA	False	NA	NA	NA	134961229	134971333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_134962456_134969310
tx.15945	chr5	+	2230	4	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	3	-1	intron_retention	FALSE	canonical	3	98	junction_3	4.92160768674447	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACCAGTGTGTACTGTA	3420	False	NA	NA	False	NA	NA	NA	134961229	134970085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_134962456_134963142_134963279_134964632_134964726_134969310
tx.15946	chr5	+	1266	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	207	0	-28	0	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	NA	False	NA	NA	NA	135038516	135041024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
tx.15947	chr5	+	1124	6	FSM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	364	5	-28	0	multi-exon	FALSE	canonical	3	445	junction_1	65.8634952003004	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	NA	False	NA	NA	NA	135038516	135041024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
tx.15948	chr5	+	1738	2	ISM	ENSMUSG00000040532.15	ENSMUST00000149778.2	1475	3	-42	0	-27	0	intron_retention	FALSE	canonical	3	589	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	NA	False	NA	NA	NA	135038517	135041024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_135038972_135039740
tx.15949	chr5	+	1673	4	ISM	ENSMUSG00000007207.11	ENSMUST00000156626.8	2114	7	1540	-1	1334	0	3prime_fragment	FALSE	canonical	3	18	junction_1	6.12825877028341	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCTGTTTGGAACA	7216	False	NA	NA	False	NA	NA	NA	135071453	135079954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_135071521_135074450_135074589_135077764_135077959_135078680
tx.1595	chr10	-	1814	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	-2	1	-2	-1	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTTGAGTATGACTT	NA	False	NA	NA	False	NA	NA	NA	67121086	67102468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
tx.15950	chr5	+	1640	4	NNC	ENSMUSG00000007207.11	novel	2162	10	NA	NA	1319	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	6.84754619472471	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCTGTTTGGAACA	7201	False	NA	NA	False	NA	NA	NA	135071438	135079954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_135071521_135074450_135074589_135077564_135077711_135078680
tx.15951	chr5	-	1285	12	ISM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	579	0	3	0	3prime_fragment	FALSE	canonical	3	942	junction_2	58.9567708278386	496	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCCTGGCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	135092941	135081810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
tx.15952	chr5	-	1556	4	FSM	ENSMUSG00000043614.14	ENSMUST00000067935.11	1544	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	21	junction_3	2.86744175568088	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCCCCGCCTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	135107132	135101753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_135102838_135103247_135103331_135105311_135105484_135106915
tx.15953	chr5	+	3463	17	FSM	ENSMUSG00000005373.14	ENSMUST00000005507.10	3622	17	-25	184	2	-184	multi-exon	FALSE	canonical	2	15	junction_13	3.60067268020852	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCGGCCCTTTGAGTAC	3409	False	NA	NA	False	NA	NA	NA	135135746	135167052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
tx.15954	chr5	+	5430	6	FSM	ENSMUSG00000005374.14	ENSMUST00000005508.14	1368	6	-10	-4052	-10	-1887	multi-exon	FALSE	canonical	2	7	junction_3	93.5037967143581	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGACTCCCTGGTGGTC	9509	False	NA	NA	False	NA	NA	NA	135178529	135192727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135186385_135186513_135187457_135187611_135188073
tx.15955	chr5	+	4365	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	30	3093	1	2846	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	387	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGATTCTTTGCTTGT	9520	False	NA	NA	False	NA	NA	NA	135178540	135191521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
tx.15956	chr5	+	4509	8	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	1	2845	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	100.646278964439	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTGATTCTTTGCTTG	9525	False	NA	NA	False	NA	NA	NA	135178545	135191520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_135178719_135178843_135178994_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
tx.15957	chr5	+	7426	6	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	3	2844	intron_retention	FALSE	canonical	3	208	junction_2	18.9905239527507	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9527	False	NA	NA	False	NA	NA	NA	135178547	135191519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
tx.15958	chr5	+	1668	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	86	4	-20	-4	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	210	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGACAGCTTCTTTC	8755	False	NA	NA	False	NA	NA	NA	135197222	135210705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
tx.15959	chr5	+	6504	19	FSM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-12	0	-12	0	multi-exon	FALSE	canonical	3	180	junction_5	50.9896201008077	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	False	NA	NA	False	NA	NA	NA	135216105	135274983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
tx.1596	chr10	-	4248	5	FSM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	9	2	9	-2	multi-exon	FALSE	canonical	3	8	junction_3	4.58257569495584	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTGGTCTGTTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	67748483	67721934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030_67745790_67748200
tx.15960	chr5	+	4774	13	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	29767	0	8623	0	3prime_fragment	FALSE	canonical	3	263	junction_1	21.7030143835674	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	False	NA	NA	False	NA	NA	NA	135245884	135274983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
tx.15961	chr5	+	3357	11	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	35833	2	14689	-2	3prime_fragment	FALSE	canonical	3	298	junction_2	15.179262169157	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACAGCTTTGATGTTT	NA	False	NA	NA	False	NA	NA	NA	135251950	135274981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
tx.15962	chr5	-	1434	9	FSM	ENSMUSG00000040013.12	ENSMUST00000044972.11	1447	9	12	1	11	-1	multi-exon	FALSE	canonical	3	793	junction_1	94.8445273856114	539	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGCAGTACAATTCATT	NA	False	NA	NA	False	NA	NA	NA	135378886	135320558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
tx.15963	chr5	-	1273	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	11	3	11	-3	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAAGTCATTAGTGTG	NA	False	NA	NA	False	NA	NA	NA	135378886	135366222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
tx.15964	chr5	+	2107	7	NNC	ENSMUSG00000053388.11	novel	1803	6	NA	NA	-1419	105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.25718035235908	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTCTCATTAATTATT	NA	False	NA	NA	False	NA	NA	NA	135380729	135396964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392906_135392927_135395394_135395520_135395927
tx.15965	chr5	+	1985	7	NNC	ENSMUSG00000053388.11	novel	1456	6	NA	NA	-1406	-7	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	2.86744175568088	19	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTAGCCCTGTGCTTCC	NA	False	NA	NA	False	NA	NA	NA	135380742	135396852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392903_135392927_135395394_135395520_135395927
tx.15966	chr5	+	1588	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	4	651	4	4	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCACAGTTTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	135398810	135405001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
tx.15967	chr5	-	3454	3	ISM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	12328	2	12328	-2	3prime_fragment	FALSE	canonical	3	219	junction_1	1	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGAGTTTGCCCTTTA	NA	False	NA	NA	False	NA	NA	NA	135411072	135404996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_135407029_135407488_135407612_135409773
tx.15968	chr5	-	5574	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	5	1	5	-1	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	386	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGTTTGCCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	135423395	135404995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
tx.15969	chr5	-	7789	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-10	-51	intron_retention	FALSE	canonical	2	76	junction_15	42.4266818562722	72	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATCTGTGGTTTCAATT	9600	False	NA	NA	False	NA	NA	NA	135518122	135435439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
tx.1597	chr10	+	2492	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-28	-218	-11	218	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATCTGCTATTCAAA	NA	False	NA	NA	False	NA	NA	NA	67815516	67878346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
tx.15970	chr5	-	7857	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-15	-12	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	103	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTGTGGAGAACTCT	9595	False	NA	NA	False	NA	NA	NA	135518127	135435400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
tx.15971	chr5	-	5171	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-9	-2353	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	125	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAGATTTATATAACTG	9601	False	NA	NA	False	NA	NA	NA	135518121	135437741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
tx.15972	chr5	-	4919	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-19	-2639	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	122	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACTATCATTTTTAAAAA	9591	False	NA	NA	False	NA	NA	NA	135518131	135438027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
tx.15973	chr5	-	1587	13	NIC	ENSMUSG00000039959.14	novel	1625	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	166	junction_11	29.2616311157727	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCAATTAGAATTTGTT	9594	False	NA	NA	False	NA	NA	NA	135518128	135464968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
tx.15974	chr5	+	1904	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	75	2228	-11	-379	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGTGGCATACTGTG	NA	False	NA	NA	False	NA	NA	NA	135661546	135673002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
tx.15975	chr5	+	2401	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	37	1925	-13	-4	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATTTTCTTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	135661544	135673377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
tx.15976	chr5	+	2500	16	FSM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	136	0	14	0	multi-exon	FALSE	canonical	3	231	junction_9	23.2776478384069	385	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	2037	False	NA	NA	False	NA	NA	NA	135718025	135764180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
tx.15977	chr5	-	1359	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	199	1	-41	-1	multi-exon	FALSE	canonical	3	674	junction_10	35.0345756018723	510	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATGGACTGTGGATGT	5262	False	NA	NA	False	NA	NA	NA	135773103	135764339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
tx.15978	chr5	+	1297	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	157	2	1	-2	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	2897	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCTGTAGATTTCCT	610	False	NA	NA	False	NA	NA	NA	135807490	135819243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
tx.15979	chr5	+	864	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	36	3	36	-1	multi-exon	FALSE	canonical	3	2181	junction_2	11	510	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTCTGACTCCAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	135916808	135918414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_135917289_135917902_135917967_135918094
tx.1598	chr10	-	7112	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-157	-3930	-157	-4	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGGAGTGTCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	67972613	67928353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
tx.15980	chr5	-	3545	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	-25	0	-8	0	multi-exon	FALSE	canonical	3	925	junction_1	0	1861	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	135963478	135937262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_135940506_135963176
tx.15981	chr5	-	2816	11	NIC	ENSMUSG00000029699.14	novel	2745	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	4.80520551069359	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTAACTGAGGTCATT	NA	False	NA	NA	False	NA	NA	NA	136003383	135989076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_135990063_135990742_135990821_135991776_135992089_135992209_135992285_135993472_135993551_135994424_135994740_135994928_135995007_135996591_135996898_135997077_135997114_135999035_135999320_136003115
tx.15982	chr5	+	1315	8	FSM	ENSMUSG00000004948.13	ENSMUST00000005073.13	1323	8	8	0	8	0	multi-exon	TRUE	canonical	3	12	junction_4	3.97953950776689	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGTGGTTTAATG	NA	False	NA	NA	False	NA	NA	NA	136008960	136017478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136009297_136011492_136011612_136013015_136013120_136013201_136013386_136014398_136014517_136016108_136016201_136016325_136016463_136017253
tx.15983	chr5	+	2639	11	FSM	ENSMUSG00000004947.16	ENSMUST00000111142.9	2650	11	11	0	0	0	multi-exon	TRUE	canonical	3	47	junction_6	35.5758344947803	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGGGAAGTTTTGTGT	8470	False	NA	NA	False	NA	NA	NA	136023664	136061726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
tx.15984	chr5	+	2498	10	FSM	ENSMUSG00000004947.16	ENSMUST00000111145.10	2493	10	2	-7	2	0	multi-exon	FALSE	canonical	3	84	junction_5	18.5279235376575	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTGGGAAGTTTTGTG	8472	False	NA	NA	False	NA	NA	NA	136023666	136061725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
tx.15985	chr5	+	3120	20	FSM	ENSMUSG00000004952.14	ENSMUST00000135344.8	3057	20	-60	-3	-16	-2	multi-exon	TRUE	canonical	3	36	junction_7	10.66669552166	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGAGGTGTTGGGTTG	2174	False	NA	NA	False	NA	NA	NA	136112791	136140712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
tx.15986	chr5	+	2886	21	FSM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	26	2	-12	-2	multi-exon	FALSE	canonical	3	36	junction_7	10.6273232754067	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGAGGTGTTGGGTTG	2178	False	NA	NA	False	NA	NA	NA	136112795	136140712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
tx.15987	chr5	+	582	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	64	0	-7	0	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9276	False	NA	NA	False	NA	NA	NA	136145548	136151801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
tx.15988	chr5	-	2167	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	12	294	0	1	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	506	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTGGGAAATGAGTGT	6696	False	NA	NA	False	NA	NA	NA	136164916	136151919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
tx.15989	chr5	+	1657	3	FSM	ENSMUSG00000039754.11	ENSMUST00000136634.8	557	3	3	-1103	3	0	multi-exon	FALSE	canonical	3	9	junction_1	26.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCTCCTTTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	136165002	136170469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136165149_136168315_136168390_136169032
tx.1599	chr10	-	7568	10	FSM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	10	3	-9	-3	multi-exon	TRUE	canonical	3	31	junction_9	46.8506953451172	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGAGTGTCTGTCTCT	5336	False	NA	NA	False	NA	NA	NA	68114560	67928352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
tx.15990	chr5	+	1781	3	FSM	ENSMUSG00000039754.11	ENSMUST00000041100.4	1773	3	-5	-3	3	0	multi-exon	FALSE	canonical	3	62	junction_2	0.5	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCTCCTTTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	136165002	136170469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136165149_136168191_136168390_136169032
tx.15991	chr5	-	913	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	24	2956	24	1	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGTCCACACGTGCGA	NA	False	NA	NA	False	NA	NA	NA	136227793	136209936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
tx.15992	chr5	-	2870	9	FSM	ENSMUSG00000005057.14	ENSMUST00000005188.14	2848	9	-14	-8	-14	6	multi-exon	TRUE	canonical	1	1	junction_1	2.73861278752583	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGTGGTCATTCTACT	2488	False	NA	NA	False	NA	NA	NA	136273771	136246994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_136248007_136248495_136248668_136250701_136250911_136253008_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
tx.15993	chr5	-	3116	23	NIC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	22.7204080541869	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	136596325	136276988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355865_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
tx.15994	chr5	-	3078	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	-247	0	-21	0	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	136596365	136276988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
tx.15995	chr5	-	6401	24	NIC	ENSMUSG00000029705.18	novel	4882	24	NA	NA	-27	822	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	48.5465496798929	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGTCTCTTGATTCCT	NA	False	NA	NA	False	NA	NA	NA	136596371	136302101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
tx.15996	chr5	-	2297	11	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-9735	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.6068477092082	29	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTTTCTGTGGCTTG	904	False	NA	NA	False	NA	NA	NA	136811635	136770616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136783868_136786485_136786643_136794155_136794218_136811559
tx.15997	chr5	-	2368	11	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-9702	-4	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	9.19565114605812	38	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTTTCTGTGGCTTG	937	False	NA	NA	False	NA	NA	NA	136811602	136770616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136783868_136786485_136786643_136794155_136794218_136811455
tx.15998	chr5	+	904	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	7	2160	7	63	multi-exon	FALSE	canonical	3	57	junction_4	11.0989864402116	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTAGCACTGTGTTTTC	4062	False	NA	NA	False	NA	NA	NA	136937010	136942098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
tx.15999	chr5	+	3988	4	FSM	ENSMUSG00000007987.13	ENSMUST00000200153.5	670	4	-42	-3276	10	-6	multi-exon	FALSE	canonical	3	69	junction_3	7.34846922834953	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCACCTCTATCTCGTCT	4065	False	NA	NA	False	NA	NA	NA	136937013	136944252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542
tx.16	chr1	+	4283	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	63	886	53	83	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	7159206	7242966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
tx.1600	chr10	-	6243	2	ISM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	34633	-3928	34633	-6	3prime_fragment	FALSE	canonical	3	121	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGGGAGTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	67937823	67928355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_67934500_67937724
tx.16000	chr5	+	3771	4	FSM	ENSMUSG00000097908.8	ENSMUST00000181045.8	3967	4	200	-4	-6	-2	multi-exon	FALSE	canonical	3	48	junction_3	24.0878023535196	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTCGCTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	136948199	136965964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962592
tx.16001	chr5	+	947	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	3	-2	3	0	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	4054	False	NA	NA	False	NA	NA	NA	136982131	136995088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
tx.16002	chr5	+	767	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	19	0	19	0	multi-exon	FALSE	canonical	3	370	junction_1	76.6823806359714	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	3287	False	NA	NA	False	NA	NA	NA	136990949	136995088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
tx.16003	chr5	-	693	5	FSM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	43	4	-29	0	multi-exon	FALSE	canonical	3	69	junction_4	104.169033306449	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	NA	False	NA	NA	NA	137015712	137011047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137015664
tx.16004	chr5	-	965	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	213	30	213	0	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	NA	False	NA	NA	NA	137016662	137011047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
tx.16005	chr5	+	2709	20	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-124	-106	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	42.0605683834917	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTCCGTGAGTCCAATA	NA	False	NA	NA	False	NA	NA	NA	137016107	137025396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_137016229_137016458_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
tx.16006	chr5	+	2898	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	274	108	-85	-108	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	225	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGTCCGTGAGTCCAA	NA	False	NA	NA	False	NA	NA	NA	137016146	137025394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
tx.16007	chr5	-	2222	5	NIC	ENSMUSG00000004849.15	novel	1353	5	NA	NA	63	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	330.446194561233	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGCCTTGGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	137074833	137063849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137073833
tx.16008	chr5	-	1277	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	71	5	-22	-5	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	405	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTTTGCCTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	137074918	137063851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
tx.16009	chr5	-	3299	14	FSM	ENSMUSG00000037344.15	ENSMUST00000039991.14	3330	14	31	0	31	0	multi-exon	FALSE	canonical	3	21	junction_3	4.75307437100782	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGTGGAGCACTGCT	6532	False	NA	NA	False	NA	NA	NA	137331828	137312819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137331709
tx.1601	chr10	-	1196	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	23	3156	-5	22	multi-exon	TRUE	canonical	3	2056	junction_1	102.156542539739	907	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGTGGTGGCTGTTA	NA	False	NA	NA	False	NA	NA	NA	69188745	69174131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
tx.16010	chr5	+	4323	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	2	15	2	-7	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	390	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCAGTCCAGAGGGTG	NA	False	NA	NA	False	NA	NA	NA	137348372	137372775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
tx.16011	chr5	-	798	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	83	0	-10	0	multi-exon	FALSE	canonical	3	320	junction_1	0	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1722	False	NA	NA	False	NA	NA	NA	137500697	137499700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_137500342_137500540
tx.16012	chr5	+	6004	27	Fusion	ENSMUSG00000106237.2_ENSMUSG00000029714.12	novel	5440	24	NA	NA	161	-1	multi-exon	TRUE	canonical	0	0	junction_23	18.3778552102844	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTGCCAGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	137508675	137526196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
tx.16013	chr5	-	1633	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	226	1	13	0	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	583	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTCTCCTTGCTTACT	1758	False	NA	NA	False	NA	NA	NA	137531546	137526389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
tx.16014	chr5	+	2626	17	ISM	ENSMUSG00000029716.14	ENSMUST00000198783.5	2973	18	583	-1	-63	1	3prime_fragment	FALSE	canonical	1	1	junction_5	2.24913177693082	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTAGCTTCCTCTTCA	5115	False	NA	NA	False	NA	NA	NA	137569649	137585739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575719_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137580934_137581019_137581084_137581180_137581249_137581335_137581413_137581492_137581578_137581666_137581895_137582187_137582329_137585090
tx.16015	chr5	-	1524	6	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	2776	-1	-408	1	3prime_fragment	FALSE	canonical	3	504	junction_5	47.2245698762837	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATCGTGTCTGAGGTT	6910	False	NA	NA	False	NA	NA	NA	137606862	137603368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216
tx.16016	chr5	-	1556	8	ISM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	799	2	14	0	3prime_fragment	FALSE	canonical	3	423	junction_6	64.4265124789793	237	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	4822	False	NA	NA	False	NA	NA	NA	137608950	137603366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658
tx.16017	chr5	+	3056	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	24	-2	2	2	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	458	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTGTGTGCCTGCCTG	2208	False	NA	NA	False	NA	NA	NA	137627406	137639358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
tx.16018	chr5	+	1085	6	FSM	ENSMUSG00000079165.11	ENSMUST00000177466.8	1005	6	-47	-33	-47	-1	multi-exon	FALSE	canonical	3	122	junction_1	39.5858560599616	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	1054	False	NA	NA	False	NA	NA	NA	137639548	137641163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_137639819_137639983_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
tx.16019	chr5	-	2890	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	3	0	3	0	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1767	False	NA	NA	False	NA	NA	NA	137682985	137648724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
tx.1602	chr10	+	5190	20	FSM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	308	-426	21	426	multi-exon	FALSE	canonical	3	43	junction_16	15.2197204046814	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGTTCCACAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	69761669	69861210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
tx.16020	chr5	-	2925	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	-45	-22	1	0	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1765	False	NA	NA	False	NA	NA	NA	137682987	137648724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
tx.16021	chr5	-	3505	7	NIC	ENSMUSG00000045348.17	novel	3912	7	NA	NA	-70	31	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	6.97017455544216	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTCTTCTTATATCCC	8553	False	NA	NA	False	NA	NA	NA	137739434	137729143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137737912_137738065_137739312
tx.16022	chr5	+	2341	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	-17	1659	-17	201	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	307	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGAGGTTGGTGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	137744240	137758011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
tx.16023	chr5	+	1728	4	ISM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	1029	1659	1029	201	3prime_fragment	FALSE	canonical	3	331	junction_1	27.9404127862612	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGAGGTTGGTGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	137745286	137758011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_137746122_137749469_137749631_137756945_137756995_137757328
tx.16024	chr5	+	945	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	11	0	11	0	multi-exon	FALSE	canonical	3	301	junction_1	53.8970211504206	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	NA	False	NA	NA	NA	137777176	137778372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
tx.16025	chr5	-	2826	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	302	0	302	0	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCAGCACTTTCTA	3028	False	NA	NA	False	NA	NA	NA	137784623	137780167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
tx.16026	chr5	+	2136	16	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	25.4046364972136	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTGTGCTTTGTGT	7073	False	NA	NA	False	NA	NA	NA	137786055	137820877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
tx.16027	chr5	+	2201	17	FSM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	15	6	15	-6	multi-exon	FALSE	canonical	3	53	junction_4	16.2498798072478	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTGTGCTTTGTGT	7092	False	NA	NA	False	NA	NA	NA	137786074	137820877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
tx.16028	chr5	+	8238	6	FSM	ENSMUSG00000029729.13	ENSMUST00000019660.11	8261	6	21	2	-15	-2	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTTTTAAATCCTCAT	NA	False	NA	NA	False	NA	NA	NA	138083366	138106082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851
tx.16029	chr5	+	7808	4	FSM	ENSMUSG00000029729.13	ENSMUST00000066617.12	8042	4	21	213	-15	-213	multi-exon	FALSE	canonical	2	3	junction_3	5.09901951359278	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCAGGCACTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	138083366	138105871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138098851
tx.1603	chr10	+	4600	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-113	-736	22	425	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGGTTCCACAGTGTT	NA	False	NA	NA	False	NA	NA	NA	69761670	69861209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
tx.16030	chr5	+	2150	4	FSM	ENSMUSG00000037017.16	ENSMUST00000080732.10	2134	4	-15	-1	6	1	multi-exon	FALSE	canonical	3	30	junction_1	59.1626759217517	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCGTCTCAGGACTGTTA	NA	False	NA	NA	False	NA	NA	NA	138115183	138132477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138115251_138123239_138123953_138124715_138124909_138131300
tx.16031	chr5	+	2229	5	FSM	ENSMUSG00000037017.16	ENSMUST00000062350.15	2252	5	26	-3	-8	0	multi-exon	FALSE	canonical	3	41	junction_1	46.7566840141599	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGTCTCAGGACTGTTAT	NA	False	NA	NA	False	NA	NA	NA	138115190	138132478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138115251_138116097_138116183_138123239_138123953_138124715_138124909_138131300
tx.16032	chr5	+	2167	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	-12	49	9	0	multi-exon	FALSE	canonical	3	48	junction_1	50.6776303927307	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGTCTCAGGACTGTTAT	NA	False	NA	NA	False	NA	NA	NA	138115186	138132478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300
tx.16033	chr5	+	2248	5	FSM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	13	49	-8	0	multi-exon	FALSE	canonical	3	61	junction_1	38.7774096607806	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGTCTCAGGACTGTTAT	NA	False	NA	NA	False	NA	NA	NA	138115190	138132478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138124909_138131300
tx.16034	chr5	-	4354	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	14	2102	14	-2102	multi-exon	TRUE	canonical	3	14	junction_2	1.4790199457749	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATACAAAACAAAAAC	1725	False	NA	NA	False	NA	NA	NA	138153992	138140065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
tx.16035	chr5	+	1101	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	23	663	-6	5	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	1332	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTCCAGTGGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	138159355	138162245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
tx.16036	chr5	-	2407	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	549	6	-55	-6	multi-exon	FALSE	canonical	3	1644	junction_12	192.903605514278	3303	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2265	False	NA	NA	False	NA	NA	NA	138170135	138162850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
tx.16037	chr5	+	3419	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	58	2	-8	-2	multi-exon	TRUE	canonical	3	48	junction_6	9.89356624586021	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGTGGTGCATTCCTA	8135	False	NA	NA	False	NA	NA	NA	138170321	138178689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
tx.16038	chr5	-	2384	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_14	144.727259325383	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1958	False	NA	NA	False	NA	NA	NA	138185482	138176878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
tx.16039	chr5	-	3123	13	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	362	junction_12	106.420810412667	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1958	False	NA	NA	False	NA	NA	NA	138185482	138176878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
tx.1604	chr10	+	4593	20	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	27	426	combination_of_known_junctions	FALSE	canonical	3	13	junction_18	20.5534233960282	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGTTCCACAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	69761675	69861210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851400_69851484_69859661
tx.16040	chr5	-	2299	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	5	0	0	0	multi-exon	FALSE	canonical	3	362	junction_14	100.146932869985	556	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1957	False	NA	NA	False	NA	NA	NA	138185483	138176878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
tx.16041	chr5	-	2401	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_14	167.30713843536	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1962	False	NA	NA	False	NA	NA	NA	138185478	138176878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
tx.16042	chr5	-	2508	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	176.391146985028	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1956	False	NA	NA	False	NA	NA	NA	138185484	138176878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185223
tx.16043	chr5	+	1872	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	-27	10	-27	-10	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCAGAAGTTAAGTGTA	5571	False	NA	NA	False	NA	NA	NA	138185719	138192170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
tx.16044	chr5	+	601	4	FSM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	270	6	-79	-6	multi-exon	FALSE	canonical	3	258	junction_1	67.9084350839832	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGGATGTGTGCACAG	NA	False	NA	NA	False	NA	NA	NA	138254013	138257651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138254066_138254514_138254596_138256916_138257035_138257301
tx.16045	chr5	+	960	3	FSM	ENSMUSG00000050552.9	ENSMUST00000160157.2	980	3	16	4	16	-1	multi-exon	FALSE	canonical	3	386	junction_1	14	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGTGTGCACAGAATGG	NA	False	NA	NA	False	NA	NA	NA	138254108	138257656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138254596_138256916_138257035_138257301
tx.16046	chr5	-	2540	11	FSM	ENSMUSG00000036948.18	ENSMUST00000048421.14	2490	11	-53	3	-14	0	multi-exon	FALSE	canonical	3	23	junction_10	7.05761999543756	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGAGTTTGTCTGTGTGT	9202	False	NA	NA	False	NA	NA	NA	138262309	138257920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
tx.16047	chr5	-	2601	10	FSM	ENSMUSG00000029510.16	ENSMUST00000161827.8	2586	10	-17	2	-17	0	multi-exon	FALSE	canonical	3	16	junction_6	3.67507453523138	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1704	False	NA	NA	False	NA	NA	NA	138278284	138271918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
tx.16048	chr5	+	4194	34	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	29	junction_1	25.0320272353535	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	NA	False	NA	NA	NA	138278770	138310655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
tx.16049	chr5	+	4232	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	-22	1	-5	-1	multi-exon	TRUE	canonical	2	72	junction_1	21.1857845161499	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	NA	False	NA	NA	NA	138278765	138310654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
tx.1605	chr10	+	5754	9	FSM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	-243	0	-243	0	multi-exon	FALSE	canonical	3	18	junction_3	4.1514304763539	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGGAACTGTCAAATTT	6726	False	NA	NA	False	NA	NA	NA	69932707	70029030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
tx.16050	chr5	+	3281	5	FSM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	0	2031	0	-2031	multi-exon	FALSE	canonical	3	42	junction_4	9.52299847737046	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAATGACGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	138439729	138456925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454136
tx.16051	chr5	-	3589	5	ISM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	2637	964	2529	368	3prime_fragment	FALSE	canonical	3	54	junction_4	11.146748404804	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTGTATTCAGCAG	4368	False	NA	NA	False	NA	NA	NA	138615386	138602877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316
tx.16052	chr5	-	3664	5	FSM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	22	-368	2	368	multi-exon	FALSE	canonical	3	23	junction_3	27.3530162870569	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTGTATTCAGCAG	1756	False	NA	NA	False	NA	NA	NA	138617998	138602877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
tx.16053	chr5	-	3757	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	25	967	2	365	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAGTTGTATTCAG	1756	False	NA	NA	False	NA	NA	NA	138617998	138602880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
tx.16054	chr5	+	3093	4	FSM	ENSMUSG00000056014.16	ENSMUST00000069862.11	3038	4	-52	-3	-17	3	multi-exon	FALSE	canonical	3	19	junction_3	4.92160768674447	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGACACTCTCCTTATA	1790	False	NA	NA	False	NA	NA	NA	138621103	138647101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138621251_138634425_138634553_138637756_138637850_138644375
tx.16055	chr5	+	3557	10	FSM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	18	7	18	-7	multi-exon	TRUE	canonical	2	6	junction_4	3.46410161513775	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGAGGTGGGGACTC	NA	False	NA	NA	False	NA	NA	NA	138740286	138795825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
tx.16056	chr5	-	2232	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	-19	-926	-19	-2	multi-exon	FALSE	canonical	3	66	junction_6	122.688969892706	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTGGATGCATCCCGT	NA	False	NA	NA	False	NA	NA	NA	138981861	138961770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
tx.16057	chr5	-	2638	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	-595	17	369	-17	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	395	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACAAAACTTCATGCACA	NA	False	NA	NA	False	NA	NA	NA	138981387	138961785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
tx.16058	chr5	+	3445	13	FSM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	3	2	3	-2	multi-exon	FALSE	canonical	3	278	junction_3	24.0323855569012	693	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGGCCATCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	139135980	139172263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
tx.16059	chr5	+	3915	22	FSM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	-19	-1288	1	-3	multi-exon	FALSE	canonical	3	224	junction_6	196.102233969428	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	NA	False	NA	NA	NA	139186415	139235592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.1606	chr10	+	3583	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	169	4	169	-4	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAAGTCTTGTTTTCGTC	NA	False	NA	NA	False	NA	NA	NA	70081098	70121794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
tx.16060	chr5	+	3794	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	249.524768309681	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	NA	False	NA	NA	NA	139186422	139235592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.16061	chr5	+	3957	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	0	-2	0	2	multi-exon	FALSE	canonical	3	224	junction_8	208.642464528521	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCGATTTCAAGTGATTA	NA	False	NA	NA	False	NA	NA	NA	139186414	139235552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.16062	chr5	+	4112	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	19	3	-4	-3	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	433	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	NA	False	NA	NA	NA	139186410	139235592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.16063	chr5	+	4093	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	247	junction_16	206.64914170786	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGCTTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	139186421	139235587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.16064	chr5	+	3646	19	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	224.162701328001	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	NA	False	NA	NA	NA	139186409	139235593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.16065	chr5	+	3735	20	FSM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	21	-42	-3	-3	multi-exon	FALSE	canonical	3	84	junction_6	213.143404315789	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	NA	False	NA	NA	NA	139186418	139235592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.16066	chr5	+	3905	22	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	222.683764466375	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	NA	False	NA	NA	NA	139186422	139235592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.16067	chr5	+	2135	8	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	8	0	intron_retention	FALSE	canonical	3	1098	junction_7	56.9679465908287	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	139238132	139255806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139253058_139253157_139253231_139254735
tx.16068	chr5	+	2051	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	52	4	6	-4	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	866	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTTGCAGTAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	139238130	139255802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
tx.16069	chr5	-	2836	10	NIC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	-21	0	intron_retention	FALSE	canonical	3	178	junction_9	23.5843639350783	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	4937	False	NA	NA	False	NA	NA	NA	139311398	139257630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
tx.1607	chr10	+	3526	5	NIC	ENSMUSG00000037762.7	novel	3756	6	NA	NA	120	-14	intron_retention	FALSE	canonical	1	8	junction_3	30.9546038579078	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGTATTCCAAGTCT	NA	False	NA	NA	False	NA	NA	NA	70081049	70121784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_70081209_70091789_70092023_70102921_70103066_70118118_70119028_70119703
tx.16070	chr5	-	2552	11	FSM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	4	1	4	-1	multi-exon	FALSE	canonical	3	178	junction_10	23.6296424010183	240	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGTGTGTTTATGGC	4962	False	NA	NA	False	NA	NA	NA	139311373	139257631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
tx.16071	chr5	-	1004	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	55	1402	-1	231	multi-exon	FALSE	canonical	3	183	junction_2	1.5	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	139330933	139323345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139324131_139328317_139328430_139330826
tx.16072	chr5	-	1458	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	-31	2	-6	-2	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	450	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGACTTTTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	139446288	139345495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
tx.16073	chr5	+	1503	2	FSM	ENSMUSG00000044197.9	ENSMUST00000051293.8	4157	2	63	2591	63	1061	multi-exon	FALSE	canonical	3	6	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACATGATACTTGATT	1418	False	NA	NA	False	NA	NA	NA	139366398	139379579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_139366499_139378176
tx.16074	chr5	-	3072	7	FSM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	47	2	-6	-2	multi-exon	FALSE	canonical	3	34	junction_6	12.5532200384337	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTATTCTAGACAGT	8756	False	NA	NA	False	NA	NA	NA	139470225	139456972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470031
tx.16075	chr5	+	167	2	Intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	103	junction_1	0	619	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAATAAGTAAATA	NA	False	NA	NA	False	NA	NA	NA	139470809	139497764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_139470860_139497647
tx.16076	chr5	-	3341	17	FSM	ENSMUSG00000036718.18	ENSMUST00000044642.14	3346	17	9	-4	9	4	multi-exon	FALSE	canonical	1	5	junction_8	4.83476990145343	13	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTGTGTGTGTCACCG	NA	False	NA	NA	False	NA	NA	NA	139722082	139692446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139692665_139692816_139692864_139694640_139694756_139695270_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139698136_139698895_139699153_139701460_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139721772
tx.16077	chr5	-	7131	47	FSM	ENSMUSG00000029547.11	ENSMUST00000072607.9	7102	47	-31	2	-30	1	multi-exon	TRUE	canonical	0	0	junction_11	49.3038493955329	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGGTGTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	139761459	139737038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
tx.16078	chr5	+	2720	4	NNC	ENSMUSG00000018143.11	novel	2849	3	NA	NA	-1	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	11.1455023315337	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTGGTGTCTGGATGG	NA	False	NA	NA	False	NA	NA	NA	139777287	139788405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_139777468_139784893_139784974_139785839_139787746_139787851
tx.16079	chr5	+	2860	3	FSM	ENSMUSG00000018143.11	ENSMUST00000018287.10	2849	3	-13	2	-13	-2	multi-exon	FALSE	canonical	3	22	junction_1	1.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGGTGTCTGGATGGT	NA	False	NA	NA	False	NA	NA	NA	139777254	139788406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_139777468_139784893_139784974_139785839
tx.1608	chr10	+	3382	15	FSM	ENSMUSG00000043259.16	ENSMUST00000105436.9	3380	15	2	-4	2	2	multi-exon	FALSE	canonical	3	12	junction_12	8.58332507759989	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTATGTTGAAAGCACAG	9688	False	NA	NA	False	NA	NA	NA	70276499	70394563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
tx.16080	chr5	-	862	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	2	19	2	2	multi-exon	FALSE	canonical	3	166	junction_2	27	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGCCTTCTCAGTGAT	7315	False	NA	NA	False	NA	NA	NA	139812638	139809365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139809829_139811882_139812120_139812476
tx.16081	chr5	-	773	3	FSM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	-40	0	2	0	multi-exon	FALSE	canonical	3	69	junction_2	75.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGGCCTTCTCAGTG	7315	False	NA	NA	False	NA	NA	NA	139812638	139809367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139809829_139811882_139812120_139812563
tx.16082	chr5	-	2512	17	NIC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_6	48.426329357076	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCCAAGGCTCCAAG	NA	False	NA	NA	False	NA	NA	NA	140307321	139994444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
tx.16083	chr5	-	2649	18	FSM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	-14	5	-14	0	multi-exon	FALSE	canonical	3	167	junction_17	17.902078903461	357	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATTGTGTCCAAGGCTC	NA	False	NA	NA	False	NA	NA	NA	140307321	139994448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
tx.16084	chr5	-	1432	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	8	3	8	-3	multi-exon	FALSE	canonical	3	45	junction_2	12	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTTGTTTACTTGTCTG	3909	False	NA	NA	False	NA	NA	NA	140317645	140313431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_140314536_140316734_140317025_140317607
tx.16085	chr5	+	892	4	FSM	ENSMUSG00000036639.13	ENSMUST00000071881.10	952	4	60	0	11	0	multi-exon	FALSE	canonical	3	19	junction_1	90.7450641449256	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	NA	False	NA	NA	NA	140317674	140323892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140317711_140320209_140320375_140321067_140321214_140323347
tx.16086	chr5	+	938	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	14	2	14	-2	multi-exon	FALSE	canonical	3	93	junction_1	49.2461927462418	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	False	NA	NA	False	NA	NA	NA	140317677	140323890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
tx.16087	chr5	+	935	4	FSM	ENSMUSG00000036639.13	ENSMUST00000110826.8	606	4	-2	-327	-2	-2	multi-exon	FALSE	canonical	3	152	junction_1	28.5696031162882	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	False	NA	NA	False	NA	NA	NA	140318147	140323890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140318229_140320209_140320375_140321067_140321214_140323347
tx.16088	chr5	-	2610	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	19	-2	-2	0	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	267	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	7739	False	NA	NA	False	NA	NA	NA	140374998	140326055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
tx.16089	chr5	+	2968	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	-22	-1	-22	1	multi-exon	TRUE	canonical	3	2428	junction_3	310.145868707844	5555	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	140405060	140429116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
tx.1609	chr10	+	3377	15	NIC	ENSMUSG00000043259.16	novel	3380	15	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	7.71329358699535	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATGTTGAAAGCACA	9689	False	NA	NA	False	NA	NA	NA	70276500	70394562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
tx.16090	chr5	+	1823	2	FSM	ENSMUSG00000036599.11	ENSMUST00000124142.2	766	2	26	-1083	26	-488	multi-exon	FALSE	canonical	3	9	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGGCATTCCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	140491355	140510991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140491483_140509295
tx.16091	chr5	+	1789	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	56	486	31	-486	multi-exon	FALSE	canonical	3	68	junction_1	0	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCATTCCTGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	140491360	140510993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140491452_140509295
tx.16092	chr5	+	2292	8	FSM	ENSMUSG00000029570.6	ENSMUST00000031555.3	2305	8	13	0	13	0	multi-exon	FALSE	canonical	2	6	junction_3	5.13888735674427	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGGGGCCCTAGTCTTG	NA	False	NA	NA	False	NA	NA	NA	140593087	140601300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140593600_140597604_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
tx.16093	chr5	-	4676	14	FSM	ENSMUSG00000036565.8	ENSMUST00000042661.8	4658	14	-18	0	-18	0	multi-exon	FALSE	canonical	3	60	junction_1	9.95255014746823	148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTCTCTCTCTCTCTC	1258	False	NA	NA	False	NA	NA	NA	140634804	140606332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
tx.16094	chr5	-	4370	24	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.69652169565652	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTTTGGCAGGTG	4484	False	NA	NA	False	NA	NA	NA	140688060	140649259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_140651249_140651762_140651964_140654776_140654861_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
tx.16095	chr5	-	4293	23	FSM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	62	1682	-16	-4	multi-exon	FALSE	canonical	3	8	junction_2	7.69995170103989	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTCTGCCTTTGGCA	4473	False	NA	NA	False	NA	NA	NA	140688071	140649263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
tx.16096	chr5	-	2466	21	ISM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	73	8270	-5	-3939	5prime_fragment	FALSE	canonical	3	15	junction_8	7.13161973187017	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATCTAGCTTATTGATA	4484	False	NA	NA	False	NA	NA	NA	140688060	140655851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
tx.16097	chr5	+	3353	14	NIC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	24.0315374643282	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690766	140705131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
tx.16098	chr5	+	3319	14	FSM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	14	0	2	0	multi-exon	FALSE	canonical	3	71	junction_1	10.6471097836719	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690779	140705134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
tx.16099	chr5	+	3445	14	FSM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	-14	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	24.1966793164027	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690806	140705134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
tx.1610	chr10	+	3300	14	FSM	ENSMUSG00000043259.16	ENSMUST00000062883.7	3262	14	-33	-5	13	0	multi-exon	FALSE	canonical	3	12	junction_11	8.57062549069641	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGTTGAAAGCACAGTAA	9911	False	NA	NA	False	NA	NA	NA	70276722	70394566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
tx.16100	chr5	+	2604	7	FSM	ENSMUSG00000050022.17	ENSMUST00000120630.3	4037	7	36	1397	-5	-16	multi-exon	FALSE	canonical	0	0	junction_3	4.16333199893227	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCTACCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	140721316	140739049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_140721394_140726819_140727343_140729771_140729940_140733897_140734027_140734369_140734543_140734909_140735087_140737692
tx.16101	chr5	+	5355	6	ISM	ENSMUSG00000050022.17	ENSMUST00000120630.3	4037	7	4110	-2	4069	2	3prime_fragment	FALSE	canonical	0	0	junction_2	4.53431361950185	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCATCAACTATTT	1293	False	NA	NA	False	NA	NA	NA	140725390	140740448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_140727343_140729771_140729940_140733897_140734027_140734369_140734543_140734909_140735087_140737692
tx.16102	chr5	+	1425	2	ISM	ENSMUSG00000050022.17	ENSMUST00000176035.2	2402	4	-3	8129	-3	0	5prime_fragment	FALSE	canonical	3	12	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGTGTCATGTATTGT	NA	False	NA	NA	False	NA	NA	NA	140735034	140739065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_140735087_140737692
tx.16103	chr5	-	3425	4	FSM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	-10	1	-10	-1	multi-exon	FALSE	canonical	3	201	junction_1	26.9938264547038	532	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGCTTCATGCCTAGCA	NA	False	NA	NA	False	NA	NA	NA	140816196	140744163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_140746874_140748344_140748396_140771151_140771368_140815748
tx.16104	chr5	-	1303	6	FSM	ENSMUSG00000036526.9	ENSMUST00000196169.2	1299	6	-2	-2	-2	0	multi-exon	FALSE	canonical	2	4	junction_5	3.77359245282264	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTTATCCCACAGTC	NA	False	NA	NA	False	NA	NA	NA	140867962	140858744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_140859285_140860095_140860212_140862151_140862277_140863717_140863898_140866052_140866189_140867756
tx.16105	chr5	+	7438	9	FSM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	1	0	1	0	multi-exon	FALSE	canonical	3	17	junction_3	5.8309518948453	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCCAAGGGTATGAGTG	NA	False	NA	NA	False	NA	NA	NA	142387255	142447766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
tx.16106	chr5	+	2804	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-20	905	-10	3	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8680	False	NA	NA	False	NA	NA	NA	142449788	142463560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
tx.16107	chr5	+	3775	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	63	junction_7	13.0632648633061	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGAGGGCGCGGTGTCTT	8680	False	NA	NA	False	NA	NA	NA	142449788	142464465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
tx.16108	chr5	+	3766	17	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-8	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	25.2979124632844	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGCGGTGTCTTCTGGGT	8682	False	NA	NA	False	NA	NA	NA	142449790	142464471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456365_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
tx.16109	chr5	-	3674	15	FSM	ENSMUSG00000029576.18	ENSMUST00000063635.15	3700	15	26	0	5	0	multi-exon	FALSE	canonical	3	29	junction_12	8.41069532906569	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATGTAGGATCTGCA	NA	False	NA	NA	False	NA	NA	NA	142536827	142470593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
tx.1611	chr10	-	1905	5	FSM	ENSMUSG00000037747.10	ENSMUST00000046513.10	2877	5	-64	1036	-64	159	multi-exon	FALSE	canonical	3	11	junction_1	4.33012701892219	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTACGTTGTATA	NA	False	NA	NA	False	NA	NA	NA	70435185	70394547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_70395612_70401003_70401122_70404731_70404907_70406652_70406850_70434834
tx.16110	chr5	+	4241	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	14	916	14	-916	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	746	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGAGTCAAGTGCAT	NA	False	NA	NA	False	NA	NA	NA	142615310	142655427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
tx.16111	chr5	+	2796	11	FSM	ENSMUSG00000050822.12	ENSMUST00000058418.8	2789	11	-7	0	-7	0	multi-exon	TRUE	canonical	3	36	junction_7	3.13847096529504	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCTGTCCTGAGGAAGT	NA	False	NA	NA	False	NA	NA	NA	142687848	142708245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_142688047_142691110_142691291_142697717_142697850_142698641_142698756_142699765_142699895_142700800_142700876_142703346_142703592_142704211_142704354_142704465_142704654_142705711_142705953_142707093
tx.16112	chr5	-	2339	7	ISM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	45865	0	-5775	0	3prime_fragment	FALSE	canonical	3	137	junction_6	19.3878541589545	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTCGTTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	142757552	142740543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059
tx.16113	chr5	-	6483	16	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	90	junction_14	28.7986110776197	60	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTGCCTCGTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	142803411	142740544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
tx.16114	chr5	-	5157	13	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	145	-4	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	19.7672217460005	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTGTGTGCCTCGTTTC	2020	False	NA	NA	False	NA	NA	NA	142774133	142740547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888
tx.16115	chr5	-	6639	17	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_15	45.1725857130185	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACTGTGTGCCTCGTTT	NA	False	NA	NA	False	NA	NA	NA	142803415	142740548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142778759_142778916_142800769_142801201_142803026
tx.16116	chr5	-	2812	5	FSM	ENSMUSG00000066640.12	ENSMUST00000035985.8	2831	5	20	-1	20	1	multi-exon	FALSE	canonical	3	17	junction_3	6.28490254498827	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCTCCAGGATGTTT	NA	False	NA	NA	False	NA	NA	NA	142880973	142857542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_142858276_142864412_142864632_142871293_142872838_142874423_142874631_142880864
tx.16117	chr5	-	1886	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	29	5	0	-5	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	4140	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGTGGCTCTGTG	8918	False	NA	NA	False	NA	NA	NA	142892480	142888874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
tx.16118	chr5	+	2660	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	13	2	13	0	multi-exon	FALSE	canonical	3	2634	junction_2	132.012310032057	4322	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	NA	False	NA	NA	NA	142946110	142958938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
tx.16119	chr5	-	4495	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	-21	0	-21	0	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6109	False	NA	NA	False	NA	NA	NA	143098770	142976647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
tx.1612	chr10	-	3607	22	FSM	ENSMUSG00000014329.15	ENSMUST00000014473.6	3231	22	-149	-227	-139	227	multi-exon	FALSE	canonical	1	1	junction_2	4.79370335301786	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCCAGAAAACTTAGAAG	NA	False	NA	NA	False	NA	NA	NA	70995669	70760704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_70761209_70763544_70763625_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
tx.16120	chr5	-	4665	17	FSM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	-34	-927	-20	0	multi-exon	FALSE	canonical	3	116	junction_14	28.9242005075335	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6110	False	NA	NA	False	NA	NA	NA	143098769	142976647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
tx.16121	chr5	-	3389	5	FSM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	-53	-1	-8	1	multi-exon	FALSE	canonical	3	25	junction_4	6.20483682299543	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTATGTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	143166538	143157939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165298_143166303
tx.16122	chr5	+	4440	5	FSM	ENSMUSG00000029587.17	ENSMUST00000075916.8	4384	5	-58	2	15	-2	multi-exon	FALSE	canonical	2	8	junction_3	16.7835484924971	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTATGCTTCCTTAA	NA	False	NA	NA	False	NA	NA	NA	143220943	143233709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143221135_143222008_143222072_143225708_143225906_143226074_143226171_143229816
tx.16123	chr5	+	4377	5	FSM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	8	880	8	-2	multi-exon	FALSE	canonical	3	36	junction_1	7.11951543294907	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTATGCTTCCTTAA	NA	False	NA	NA	False	NA	NA	NA	143220936	143233709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074_143226171_143229816
tx.16124	chr5	-	2186	6	FSM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	20	2	0	0	multi-exon	FALSE	canonical	3	130	junction_3	6.98569967862919	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGGCATTGTGGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	143301095	143286963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300657
tx.16125	chr5	-	1548	9	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	33	junction_8	94.7198995723707	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5305	False	NA	NA	False	NA	NA	NA	143314975	143302243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314432_143314653_143314920
tx.16126	chr5	-	1344	8	FSM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	19	1	-8	0	multi-exon	FALSE	canonical	3	167	junction_7	40.248209492435	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5288	False	NA	NA	False	NA	NA	NA	143314992	143302244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
tx.16127	chr5	-	1285	8	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	87.5293536769354	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTTGTTTTCTCAT	5287	False	NA	NA	False	NA	NA	NA	143314993	143302248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314201_143314326_143314920
tx.16128	chr5	+	1840	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-10	-1	-10	1	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	630	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGGTCTTTTCTATG	NA	False	NA	NA	False	NA	NA	NA	143389582	143407657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
tx.16129	chr5	+	2893	15	FSM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	13	1745	13	-1745	multi-exon	FALSE	canonical	3	16	junction_4	5.5272977491866	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCAAGGAAGGTGTGGG	NA	False	NA	NA	False	NA	NA	NA	143450351	143489952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143450532_143452707_143452860_143458701_143458874_143460367_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
tx.1613	chr10	-	3328	21	FSM	ENSMUSG00000014329.15	ENSMUST00000143791.8	5431	21	-144	2247	-144	23	multi-exon	FALSE	canonical	1	4	junction_1	4.36205226928793	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAAAAGACAAGA	NA	False	NA	NA	False	NA	NA	NA	70995674	70760908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_70761209_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
tx.16130	chr5	+	2634	14	NIC	ENSMUSG00000039206.14	novel	4651	15	NA	NA	50	-1766	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	7.7954621908666	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTTGGTATACCATCAAA	NA	False	NA	NA	False	NA	NA	NA	143450417	143489931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_143450532_143452707_143452860_143460367_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
tx.16131	chr5	-	2278	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	34	1847	-9	1	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	953	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGTTATGCTTGTGTT	3457	False	NA	NA	False	NA	NA	NA	143513757	143491235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
tx.16132	chr5	+	2312	3	FSM	ENSMUSG00000118332.2	ENSMUST00000169329.8	2331	3	16	3	14	-3	multi-exon	FALSE	canonical	0	0	junction_2	46.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCGTATGTTCTC	NA	False	NA	NA	False	NA	NA	NA	143534476	143550277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143534890_143537163_143537297_143548511
tx.16133	chr5	+	2182	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	14	2	12	-2	multi-exon	FALSE	canonical	3	103	junction_1	0	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCGTATGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	143534474	143550278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143534890_143548511
tx.16134	chr5	+	943	2	FSM	ENSMUSG00000118332.2	ENSMUST00000118121.2	919	2	-24	0	14	0	multi-exon	TRUE	canonical	3	93	junction_1	0	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGGTGTTTTCCTAATG	NA	False	NA	NA	False	NA	NA	NA	143534476	143537693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143534890_143537163
tx.16135	chr5	+	3714	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	24	0	24	0	multi-exon	FALSE	canonical	3	61	junction_12	7.06468132488807	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAAGACTCAATTCTT	NA	False	NA	NA	False	NA	NA	NA	143608225	143696005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
tx.16136	chr5	-	5341	18	FSM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	-190	0	-190	0	multi-exon	FALSE	canonical	3	67	junction_4	13.3323240679149	219	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTCTCAGTTTTACTC	NA	False	NA	NA	False	NA	NA	NA	143718225	143696079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
tx.16137	chr5	+	2780	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	16	1529	16	-1529	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	386	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACAAGTCCCTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	143803558	143839540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
tx.16138	chr5	-	1169	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	16	0	16	0	multi-exon	FALSE	canonical	3	560	junction_3	88.5023540176569	323	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	143846641	143839521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
tx.16139	chr5	-	1060	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	12	1	4	-1	multi-exon	FALSE	canonical	3	207	junction_3	226.993881464286	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTTTATTTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	143846653	143839522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
tx.1614	chr10	-	2927	9	ISM	ENSMUSG00000014329.15	ENSMUST00000014473.6	3231	22	-156	26781	-146	-17381	5prime_fragment	FALSE	canonical	2	6	junction_4	4.63006479436303	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTGGGCAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	70995676	70787712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
tx.16140	chr5	+	2920	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	38	2524	-2	2	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGTCTGCAGTTACTG	NA	False	NA	NA	False	NA	NA	NA	143846819	143868262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
tx.16141	chr5	-	1815	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	-48	2	-24	-2	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	601	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTTTCCTGTTGAGTC	NA	False	NA	NA	False	NA	NA	NA	143951719	143924728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
tx.16142	chr5	+	8185	14	FSM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	-72	1	-72	-1	multi-exon	FALSE	canonical	3	41	junction_10	10.2628185108664	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGTTGCTACATTTAC	NA	False	NA	NA	False	NA	NA	NA	144037181	144125021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
tx.16143	chr5	+	6185	4	ISM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	73719	0	73719	0	3prime_fragment	FALSE	canonical	3	45	junction_3	12.5698050899765	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTGCTACATTTACT	NA	False	NA	NA	False	NA	NA	NA	144110972	144125022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_144113296_144119554_144119688_144119999_144120240_144121533
tx.16144	chr5	-	4967	25	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_22	17.5315192344151	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGACTGACAAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	144160414	144131262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154160_144154227_144155331_144155567_144160312
tx.16145	chr5	-	5074	25	FSM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	29	3	20	-3	multi-exon	FALSE	canonical	3	63	junction_17	9.68236871271121	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGACTGACAAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	144160404	144131262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
tx.16146	chr5	-	192	2	Antisense	novelGene_ENSMUSG00000086894.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAACTGCTGTCACCA	NA	False	NA	NA	False	NA	NA	NA	144282019	144163588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_-_144163732_144281970
tx.16147	chr5	+	773	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	3	179	3	0	multi-exon	FALSE	canonical	3	246	junction_1	16.5	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTAGCTTGTTCTGCTC	1632	False	NA	NA	False	NA	NA	NA	144192046	144201205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_144192330_144192619_144192723_144200818
tx.16148	chr5	-	3232	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	15	0	15	0	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTGTAAGTGGTACC	NA	False	NA	NA	False	NA	NA	NA	144294907	144201335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
tx.16149	chr5	+	2554	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	264	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTTCTTGTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	144482693	144494288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
tx.1615	chr10	-	2291	6	ISM	ENSMUSG00000003923.15	ENSMUST00000105432.10	779	7	212	-521	212	510	3prime_fragment	FALSE	canonical	3	350	junction_5	33.3190636122926	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCTGAAATTATGTA	NA	False	NA	NA	False	NA	NA	NA	71073898	71063765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745
tx.16150	chr5	-	5363	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	-15	-5	-15	-2	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	268	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTCCTTCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	144902672	144813306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
tx.16151	chr5	-	5218	17	NIC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	67.2339374404772	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTCCTTCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	144902674	144813306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
tx.16152	chr5	+	1617	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	10	5	10	0	multi-exon	TRUE	canonical	3	332	junction_5	31.8084545015595	260	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	145020649	145045566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
tx.16153	chr5	+	1551	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	41	1513	-2	98	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	1311	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCACTCG	8073	False	NA	NA	False	NA	NA	NA	145051065	145064996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
tx.16154	chr5	-	1316	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	152	885	-88	430	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	252	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTTTGGCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	145076896	145066463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
tx.16155	chr5	+	854	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	9	4	9	0	multi-exon	FALSE	canonical	3	705	junction_1	67.372397908936	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	145077180	145084884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
tx.16156	chr5	+	910	6	FSM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	19	-1	19	1	multi-exon	FALSE	canonical	3	107	junction_1	298.93035978301	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTACATTCTTTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	145077243	145084882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_145077374_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
tx.16157	chr5	-	2730	8	ISM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	1765	12	1613	-12	3prime_fragment	FALSE	canonical	3	72	junction_5	9.14732033918978	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTTTAACTGAGTGC	NA	False	NA	NA	False	NA	NA	NA	145102153	145084335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870
tx.16158	chr5	-	3035	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	43	9	43	-9	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTAACTGAGTGCGTC	NA	False	NA	NA	False	NA	NA	NA	145103875	145084332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
tx.16159	chr5	+	1693	8	FSM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	-18	-288	-11	0	multi-exon	FALSE	canonical	3	381	junction_6	148.975001327096	429	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	NA	False	NA	NA	NA	145104045	145118851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
tx.1616	chr10	-	3947	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	212	8	212	-8	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	369	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTGAAACCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	71073898	71061301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
tx.16160	chr5	+	1689	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	24	0	-10	0	multi-exon	FALSE	canonical	3	267	junction_6	186.36939400129	342	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	NA	False	NA	NA	NA	145104046	145118851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
tx.16161	chr5	-	437	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	512	6	-22	2	multi-exon	FALSE	canonical	3	4948	junction_3	568.415341101909	825	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGCCTGGTGTAGTCA	8609	False	NA	NA	False	NA	NA	NA	145128360	145120513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
tx.16162	chr5	-	1942	3	FSM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	8	17	-3	-17	multi-exon	FALSE	canonical	3	18	junction_2	1	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGTTGTGATTGTT	1599	False	NA	NA	False	NA	NA	NA	145138670	145131772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_145133010_145135486_145135611_145138089
tx.16163	chr5	+	3845	6	FSM	ENSMUSG00000055991.16	ENSMUST00000085671.10	3794	6	-51	0	-51	0	multi-exon	FALSE	canonical	3	45	junction_2	9.08625335328044	118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTTGAGGTTTCTCTC	886	False	NA	NA	False	NA	NA	NA	145141320	145158560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
tx.16164	chr5	+	4099	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	5	0	-1	0	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	503	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGACTCTTTGTTTTGAG	1304	False	NA	NA	False	NA	NA	NA	145168537	145184112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
tx.16165	chr5	+	4180	5	FSM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	-22	-1	4	0	multi-exon	FALSE	canonical	3	27	junction_3	175.330402383614	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGACTCTTTGTTTTGAG	1309	False	NA	NA	False	NA	NA	NA	145168542	145184112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145179729_145179835_145180384
tx.16166	chr5	+	3779	6	Fusion	ENSMUSG00000070420.5_ENSMUSG00000104682.2	novel	1796	5	NA	NA	-18	1864	multi-exon	FALSE	canonical	3	15	junction_1	14.7431339951857	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGGTGGTGGCAGCTCA	2755	False	NA	NA	False	NA	NA	NA	145217291	145229952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr5_+_145217438_145220188_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139
tx.16167	chr5	+	2908	6	NNC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	-17	967	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	6.67532770731145	71	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTCCTGTAAATTCCTG	2756	False	NA	NA	False	NA	NA	NA	145217292	145229055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_145217438_145220161_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139
tx.16168	chr5	-	3157	5	FSM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	-8	-761	-8	0	multi-exon	FALSE	canonical	3	38	junction_4	36.6401419211225	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTGTGTGCAAACTTA	2752	False	NA	NA	False	NA	NA	NA	146157794	146146005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157749
tx.16169	chr5	-	3327	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	120	5	-17	-1	multi-exon	FALSE	canonical	3	59	junction_4	27.6348964173923	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGACTGTGTGCAAACTT	2301	False	NA	NA	False	NA	NA	NA	146158245	146146006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
tx.1617	chr10	-	1412	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	19	0	19	0	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	False	NA	NA	False	NA	NA	NA	71121073	71090809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
tx.16170	chr5	-	3113	4	ISM	ENSMUSG00000029634.16	ENSMUST00000169407.9	3276	5	415	1	415	-1	3prime_fragment	FALSE	canonical	3	117	junction_2	5.09901951359278	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGACTGTGTGCAAACTT	3250	False	NA	NA	False	NA	NA	NA	146157296	146146006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211
tx.16171	chr5	+	2931	12	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-48	-4	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	26.9241358433115	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTATGGTGTCAACTA	NA	False	NA	NA	False	NA	NA	NA	146167991	146239680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
tx.16172	chr5	+	2578	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	32.5016025245936	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	NA	NA	NA	146168006	146239684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
tx.16173	chr5	+	3079	13	FSM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	-106	0	-48	0	multi-exon	FALSE	canonical	3	65	junction_3	19.7545704978761	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	NA	NA	NA	146167991	146239684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
tx.16174	chr5	+	6260	7	ISM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	56996	2	2108	-2	3prime_fragment	FALSE	canonical	3	79	junction_1	20.0118020733322	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATGGTGTCAACTATA	NA	False	NA	NA	False	NA	NA	NA	146225093	146239682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
tx.16175	chr5	+	4933	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	263	0	263	0	multi-exon	TRUE	canonical	3	97	junction_1	19.5037191768236	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	NA	False	NA	NA	NA	146322057	146410425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
tx.16176	chr5	+	4902	10	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	286	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	55.5139844465861	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGTTCTGCTTATTTA	NA	False	NA	NA	False	NA	NA	NA	146322080	146410423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146402659_146402830_146403607_146403875_146405024_146405390_146407029
tx.16177	chr5	+	4805	9	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	303	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.7058615165163	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	NA	False	NA	NA	NA	146322097	146410425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_146322149_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
tx.16178	chr5	-	4177	9	FSM	ENSMUSG00000029640.18	ENSMUST00000085614.6	4327	9	136	14	136	-14	multi-exon	FALSE	canonical	3	222	junction_1	37.7638633484446	428	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGTTTTTAACTATAC	1258	False	NA	NA	False	NA	NA	NA	146731680	146671632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
tx.16179	chr5	-	3960	8	NIC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	138	15	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	96.469726667309	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGGTTTTTAACTATA	1260	False	NA	NA	False	NA	NA	NA	146731678	146671633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146705746_146705828_146731424
tx.1618	chr10	-	749	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	97	238	97	-238	multi-exon	FALSE	canonical	3	1606	junction_1	82	400	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTACATTGTACTTGTCA	1350	False	NA	NA	False	NA	NA	NA	71180687	71166547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_71166957_71172043_71172250_71180553
tx.16180	chr5	+	783	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	27	1046	27	0	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	NA	False	NA	NA	NA	146769726	146772796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
tx.16181	chr5	+	2611	5	NIC	ENSMUSG00000041453.13	novel	1856	6	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	8667	junction_4	2022.40209899021	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTTGTTAGTGATGG	NA	False	NA	NA	False	NA	NA	NA	146769954	146773840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
tx.16182	chr5	+	1096	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	-30	1	-23	0	multi-exon	FALSE	canonical	3	123	junction_1	5077.72757835629	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	146769981	146772795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
tx.16183	chr5	+	1276	9	FSM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	15	7	15	1	multi-exon	FALSE	canonical	3	398	junction_8	56.9906790624572	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGACTCTTTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	146885481	146892417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
tx.16184	chr5	+	1458	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	-31	-1	17	1	multi-exon	FALSE	canonical	3	430	junction_2	50.1141553997328	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGACTCTTTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	146885483	146892417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
tx.16185	chr5	-	1575	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	11	-452	-1	-395	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCTTCACCTGACTCC	NA	False	NA	NA	False	NA	NA	NA	146900596	146891724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
tx.16186	chr5	-	4114	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	4	439	4	-439	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCAGCTTACATTCTT	4964	False	NA	NA	False	NA	NA	NA	147013392	146953903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
tx.16187	chr5	+	699	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	497	0	-1	0	multi-exon	FALSE	canonical	3	451	junction_1	0	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGAGTGGTTTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	147014356	147015896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_147014504_147015344
tx.16188	chr5	+	924	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	211	2	-7	-2	multi-exon	FALSE	canonical	3	400	junction_1	26.5	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTTCCTCTTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	147014366	147048169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_147014504_147038038_147038114_147047457
tx.16189	chr5	+	5150	20	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	39.0901366224708	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	147366980	147485306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
tx.1619	chr10	+	5423	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	21	3	21	-3	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	740	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTCTTCCGTTGATTAG	2237	False	NA	NA	False	NA	NA	NA	71183613	71221712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
tx.16190	chr5	+	5657	18	ISM	ENSMUSG00000029647.16	ENSMUST00000031651.15	5048	19	14	6	14	0	intron_retention	FALSE	canonical	3	100	junction_5	15.3065560280373	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	147366984	147485306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
tx.16191	chr5	+	5026	19	FSM	ENSMUSG00000029647.16	ENSMUST00000031651.15	5048	19	16	6	16	0	multi-exon	FALSE	canonical	3	100	junction_5	15.1677858764904	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	147366986	147485306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
tx.16192	chr5	+	738	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	165	676	-2	169	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	543	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATGTGTGTGGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	147797435	147812590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
tx.16193	chr5	-	2824	6	FSM	ENSMUSG00000029650.11	ENSMUST00000118527.8	2210	6	-26	-588	-26	588	multi-exon	FALSE	canonical	1	3	junction_4	0.894427190999916	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTCCAATGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	147831651	147814658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_147816025_147816502_147816660_147821006_147821091_147822780_147823652_147830642_147830856_147831518
tx.16194	chr5	-	1263	5	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	4.55521678957215	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGTATACTCTTTC	8604	False	NA	NA	False	NA	NA	NA	147949129	147941084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147949013
tx.16195	chr5	+	3058	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	11	-2060	11	-5	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATCCATGTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	148239994	148252870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
tx.16196	chr5	+	3266	3	ISM	ENSMUSG00000029651.17	ENSMUST00000110514.8	1532	8	37848	-2025	19	-2	3prime_fragment	FALSE	canonical	3	103	junction_2	5.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCATGTGGTCTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	148240002	148252873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_148240413_148243439_148243538_148250115
tx.16197	chr5	+	3168	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	19	-2602	10	-3	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCATGTGGTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	148239993	148252872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
tx.16198	chr5	-	5367	3	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	65289	0	8114	0	3prime_fragment	FALSE	canonical	3	299	junction_1	42	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTGTGGTCTCAAGC	NA	False	NA	NA	False	NA	NA	NA	148271425	148264219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_148269354_148270699_148270809_148271301
tx.16199	chr5	-	7145	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	32	2	32	-2	multi-exon	TRUE	canonical	3	299	junction_1	51.9975293216472	354	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTGTGGTCTCAA	5450	False	NA	NA	False	NA	NA	NA	148336682	148264221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
tx.1620	chr10	+	5257	4	NIC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	-3	-10	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	165.984604373083	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGGAACGTCTTCCGT	2213	False	NA	NA	False	NA	NA	NA	71183589	71221705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_71183921_71208537_71208711_71212534_71212617_71217034
tx.16200	chr5	-	2663	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	-138	12	-11	-12	multi-exon	FALSE	canonical	3	361	junction_2	34.1641259217911	394	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACATTGTAGTGCATTT	NA	False	NA	NA	False	NA	NA	NA	148489610	148441456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
tx.16201	chr5	-	2580	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	-34	-482	-34	-12	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACATTGTAGTGCATTT	NA	False	NA	NA	False	NA	NA	NA	148489633	148441456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
tx.16202	chr5	-	460	2	FSM	ENSMUSG00000108207.3	ENSMUST00000204570.2	690	2	233	-3	209	3	multi-exon	FALSE	canonical	3	15	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTCTGTATCATACG	NA	False	NA	NA	False	NA	NA	NA	148896281	148895404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_148895541_148895957
tx.16203	chr5	-	2307	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	3	528	3	-528	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	3400	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTAGTTAAATGACTT	6767	False	NA	NA	False	NA	NA	NA	148989847	148984039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
tx.16204	chr5	+	3126	10	NIC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	135.337438361387	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	149121458	149152244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
tx.16205	chr5	+	3481	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	317	-6	0	0	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	149121476	149152244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
tx.16206	chr5	+	3826	10	FSM	ENSMUSG00000041264.17	ENSMUST00000122160.8	3827	10	5	-4	1	0	multi-exon	FALSE	canonical	3	36	junction_1	142.108287696738	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	149121477	149152244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
tx.16207	chr5	+	3650	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	107	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	149121476	149152244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
tx.16208	chr5	+	1049	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	191	11	191	-11	multi-exon	FALSE	canonical	3	24	junction_2	7.22841614740048	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTAACGTCTTCAAGAGT	NA	False	NA	NA	False	NA	NA	NA	149201767	149224952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
tx.16209	chr5	-	3499	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	4	299	4	2	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	2649	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	NA	False	NA	NA	NA	149559799	149540307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
tx.1621	chr10	+	1349	5	FSM	ENSMUSG00000060733.14	ENSMUST00000118381.8	1323	5	-21	-5	-21	5	multi-exon	FALSE	canonical	3	262	junction_3	39.274673773311	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAAAGCTGCTCCTGT	2268	False	NA	NA	False	NA	NA	NA	71183644	71213251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534
tx.16210	chr5	+	1083	11	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	1	-9941	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_10	165.154503420282	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTACAGAAATGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	149601695	149664659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149664505
tx.16211	chr5	+	4558	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	11	1	11	-1	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	622	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	149601705	149686063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
tx.16212	chr5	+	1651	2	NNC	ENSMUSG00000056602.14	novel	687	5	NA	NA	-24	-118177	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGATCCATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	150042085	150065193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_150042277_150063733
tx.16213	chr5	+	1234	7	NIC	ENSMUSG00000056602.14	novel	592	4	NA	NA	-52	468	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	2.26691175145591	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTGTTTTGCTTTTCA	1223	False	NA	NA	False	NA	NA	NA	150119878	150269857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510
tx.16214	chr5	+	3731	15	ISM	ENSMUSG00000056602.14	ENSMUST00000239118.2	10618	61	150335	0	-5407	0	3prime_fragment	FALSE	canonical	3	26	junction_1	6.43650304346789	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATTTTTATATGTG	NA	False	NA	NA	False	NA	NA	NA	150369187	150421218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
tx.16215	chr5	+	10448	26	NIC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	-14	0	combination_of_known_splicesites	TRUE	canonical	3	21	junction_11	37.9278051039076	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	356	False	NA	NA	False	NA	NA	NA	150446080	150493211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
tx.16216	chr5	+	10544	27	FSM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	-27	0	-13	0	multi-exon	FALSE	canonical	3	58	junction_1	34.4104188157733	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	357	False	NA	NA	False	NA	NA	NA	150446081	150493212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
tx.16217	chr5	+	6710	16	NIC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	11086	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	31.4525392015052	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	5915	False	NA	NA	False	NA	NA	NA	150463656	150493211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
tx.16218	chr5	+	7124	17	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	17231	0	10769	0	3prime_fragment	FALSE	canonical	3	70	junction_2	23.6801604724292	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	5598	False	NA	NA	False	NA	NA	NA	150463339	150493212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
tx.16219	chr5	+	3364	14	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	25856	0	-3866	0	3prime_fragment	FALSE	canonical	3	110	junction_3	14.8407722410277	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	NA	False	NA	NA	False	NA	NA	NA	150471964	150493212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
tx.1622	chr10	+	1152	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-14	0	-13	0	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	72490713	72504997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
tx.16220	chr5	-	4335	5	ISM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	3217	4417	-908	347	3prime_fragment	FALSE	canonical	3	244	junction_2	15.8902485820707	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATGCAATGAAAATAACT	8654	False	NA	NA	False	NA	NA	NA	150585860	150563853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743
tx.16221	chr5	-	5177	6	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-97	778	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	100.608945924306	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTAAGTACTTGAAGC	5606	False	NA	NA	False	NA	NA	NA	150588908	150563422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588615
tx.16222	chr5	-	1989	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	21	6972	-14	56	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATAATCTTTTGTG	5458	False	NA	NA	False	NA	NA	NA	150589056	150566408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
tx.16223	chr5	+	7301	35	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	45	14	combination_of_known_junctions	FALSE	canonical	2	6	junction_32	35.7960026571176	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTCATGTTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	150597336	150734169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724583_150724695_150729038_150729178_150731277
tx.16224	chr5	+	7075	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	124	218	36	-8	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGCAAGTTTGACTTT	NA	False	NA	NA	False	NA	NA	NA	150597327	150733937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
tx.16225	chr5	+	4487	31	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	119	12441	31	0	5prime_fragment	FALSE	canonical	2	105	junction_29	21.7852141498668	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTCCCCTTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	150597322	150720889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035
tx.16226	chr5	+	7204	34	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	44	5	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	30.7733501869126	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTATGTGACTCAATA	NA	False	NA	NA	False	NA	NA	NA	150597335	150734137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
tx.16227	chr5	+	3453	4	ISM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	126927	24	-4563	-1	3prime_fragment	FALSE	canonical	3	166	junction_1	12.2565175405668	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATATTTTTATGTGAC	NA	False	NA	NA	False	NA	NA	NA	150724130	150734131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_150724483_150724586_150724695_150729038_150729178_150731277
tx.16228	chr5	-	1220	9	FSM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	35	62	1	1	multi-exon	FALSE	canonical	3	280	junction_1	24.5098832106561	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTTGTGTTTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	151574672	151566282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
tx.16229	chr6	+	3553	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	19	216	-3	0	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	248	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGTGTGAGACTACTA	-19	True	NA	NA	False	NA	NA	NA	3498400	3603315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
tx.1623	chr10	+	1798	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	35	1	-15	-1	multi-exon	FALSE	canonical	3	928	junction_7	94.1772102940808	963	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTCCTTGTTGCAT	NA	False	NA	NA	False	NA	NA	NA	72490711	72510795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
tx.16230	chr6	-	3934	3	NIC	ENSMUSG00000032757.7	novel	1516	4	NA	NA	20	-2	intron_retention	FALSE	canonical	3	308	junction_1	46	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTTGTGTGTTCTTGGC	-15	True	NA	NA	False	NA	NA	NA	4086952	4076900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_4078037_4079960_4082583_4086776
tx.16231	chr6	-	1480	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	29	7	-13	-7	multi-exon	FALSE	canonical	3	308	junction_1	40.3016404408335	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTAAGTGTTGTGTGTTC	-6	True	NA	NA	False	NA	NA	NA	4086943	4076905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
tx.16232	chr6	+	3875	18	FSM	ENSMUSG00000015189.13	ENSMUST00000015333.12	3961	18	83	3	-27	-3	multi-exon	FALSE	canonical	3	22	junction_3	9.97574914150592	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCATGTGTGGTTTTTG	-6	True	NA	NA	False	NA	NA	NA	4600921	4643352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
tx.16233	chr6	-	1633	11	FSM	ENSMUSG00000004631.16	ENSMUST00000115579.8	1696	11	63	0	16	0	multi-exon	FALSE	canonical	3	7	junction_4	4.92848861214064	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTAAAATTTCTTTC	9931	False	NA	NA	False	NA	NA	NA	4747141	4674349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
tx.16234	chr6	-	3759	11	FSM	ENSMUSG00000019577.7	ENSMUST00000019721.7	3484	11	-275	0	-275	0	multi-exon	FALSE	canonical	2	10	junction_7	4.42831796509691	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGTCTTATAAAATTC	NA	False	NA	NA	False	NA	NA	NA	5496584	5483350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_5485593_5486677_5486792_5487063_5487175_5487378_5487478_5489134_5489212_5491069_5491148_5491590_5491678_5491829_5492015_5492705_5492778_5494889_5495032_5496032
tx.16235	chr6	-	2957	16	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	176.689482803401	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTTGCTCTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	6217206	6041215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6216995
tx.16236	chr6	-	3102	18	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_13	48.4240210344906	839	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	6217157	6041218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
tx.16237	chr6	-	458	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	20	994	20	-994	multi-exon	FALSE	canonical	3	3186	junction_2	110.5	430	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGTTCAGATGTCT	-5	True	NA	NA	False	NA	NA	NA	6578638	6558287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_6558492_6560407_6560502_6578478
tx.16238	chr6	+	995	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	8	3320	5	-3320	multi-exon	FALSE	canonical	0	0	junction_1	0	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTATGTTGGGTGACC	-10	True	NA	NA	False	NA	NA	NA	6956011	7039659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_6956201_7038853
tx.16239	chr6	-	2955	4	FSM	ENSMUSG00000029752.13	ENSMUST00000140097.2	448	4	-2202	-305	-2202	4	multi-exon	FALSE	canonical	3	8136	junction_3	423.973531668612	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	NA	False	NA	NA	False	NA	NA	NA	7679587	7675164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230
tx.1624	chr10	-	3120	2	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_1	0	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	74555795	74550614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_-_74551462_74553522
tx.16240	chr6	-	1956	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	45	0	45	0	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	9149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	5	True	NA	NA	False	NA	NA	NA	7693209	7675168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
tx.16241	chr6	-	3301	3	ISM	ENSMUSG00000029752.13	ENSMUST00000140097.2	448	4	-1205	-734	-1205	433	intron_retention	FALSE	canonical	3	8226	junction_2	425.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	NA	False	NA	NA	False	NA	NA	NA	7678590	7674735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_7675525_7675992_7676149_7676234
tx.16242	chr6	+	6162	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-70	0	-70	0	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCATCTGTGTATTTT	-13	True	NA	NA	False	NA	NA	NA	7844771	7875687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
tx.16243	chr6	+	5247	2	ISM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	21589	0	21589	0	3prime_fragment	FALSE	canonical	3	134	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCATCTGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	7866430	7875687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_7867044_7871053
tx.16244	chr6	+	3698	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	8	4	8	2	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	276	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTTGAAACTTTTTTC	-10	True	NA	NA	False	NA	NA	NA	8209229	8236270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
tx.16245	chr6	-	633	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	37	0	4	0	multi-exon	FALSE	canonical	3	1410	junction_2	59.4474557908074	278	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCAATTGTTTT	-11	True	NA	NA	False	NA	NA	NA	8259136	8255935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
tx.16246	chr6	+	2083	4	FSM	ENSMUSG00000089862.9	ENSMUST00000159433.8	2025	4	-55	-3	-7	-1	multi-exon	FALSE	canonical	2	17	junction_2	5.43650214343336	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTTTCATTGCATT	2	True	NA	NA	False	NA	NA	NA	8259374	8428763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970
tx.16247	chr6	-	1756	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	318	1	-12	-1	multi-exon	FALSE	canonical	3	58	junction_8	7.8401183423021	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTCACTCCTGTTTGG	378	False	NA	NA	False	NA	NA	NA	8778166	8630527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
tx.16248	chr6	-	502	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	28	80	-5	0	multi-exon	FALSE	canonical	3	8511	junction_2	453.262494465281	1068	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	-3	True	NA	NA	False	NA	NA	NA	11907454	11900370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
tx.16249	chr6	+	3351	16	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-2	-399	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	26.8104457255004	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGAGTTTATTTTTTGT	33	False	NA	NA	False	NA	NA	NA	11907805	12007613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
tx.1625	chr10	+	3527	3	NIC	ENSMUSG00000040009.7	novel	3519	4	NA	NA	-84	-1	combination_of_known_junctions	TRUE	canonical	2	4	junction_1	2.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCAAACTCTGTCCCT	NA	False	NA	NA	False	NA	NA	NA	74802924	74852729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_74803215_74826765_74827973_74850699
tx.16250	chr6	+	3189	18	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	28.9182118357714	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTATTTGAAATTCATA	7	True	NA	NA	False	NA	NA	NA	11907779	12081197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
tx.16251	chr6	+	3570	16	FSM	ENSMUSG00000029629.18	ENSMUST00000090632.11	3985	16	-40	455	-6	-387	multi-exon	FALSE	canonical	3	71	junction_1	26.0421879947818	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGGTTTCCTTC	-32	True	NA	NA	False	NA	NA	NA	11925873	12007625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
tx.16252	chr6	+	3350	17	FSM	ENSMUSG00000029629.18	ENSMUST00000115510.8	3353	17	2	1	2	-1	multi-exon	FALSE	canonical	3	33	junction_16	37.0717210282986	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGTATTGTATGATTT	-24	True	NA	NA	False	NA	NA	NA	11925881	12008011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
tx.16253	chr6	+	3360	18	FSM	ENSMUSG00000029629.18	ENSMUST00000115511.9	3336	18	-31	7	4	0	multi-exon	FALSE	canonical	3	71	junction_1	28.335117658721	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTATTTGAAATTCATA	-22	True	NA	NA	False	NA	NA	NA	11925883	12081197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
tx.16254	chr6	+	6051	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-55	6	25	-6	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGGGTCATCCTC	-30	True	NA	NA	False	NA	NA	NA	13069782	13089262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
tx.16255	chr6	-	3609	4	ISM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	4713	607	4361	-607	3prime_fragment	TRUE	canonical	3	188	junction_3	21.2759645296439	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	4644	False	NA	NA	False	NA	NA	NA	13603386	13581292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236
tx.16256	chr6	-	3914	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	66	607	-7	-607	multi-exon	FALSE	canonical	3	155	junction_4	32.9194091684526	360	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-3	True	NA	NA	False	NA	NA	NA	13608033	13581292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
tx.16257	chr6	-	4150	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	-11	4	-11	-4	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTTGTCTGTTACT	NA	False	NA	NA	False	NA	NA	NA	13677976	13625675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
tx.16258	chr6	-	1058	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	42	2077	-10	-12	multi-exon	FALSE	canonical	3	64	junction_2	22	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATCAGTTCACCTATTG	857	False	NA	NA	False	NA	NA	NA	13871475	13869810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_13870740_13871054_13871146_13871437
tx.16259	chr6	+	3410	5	FSM	ENSMUSG00000041390.19	ENSMUST00000101663.10	3431	5	23	-2	-19	2	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCTTTAAGATCTTTT	-18	True	NA	NA	False	NA	NA	NA	15720682	15802166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
tx.1626	chr10	+	2564	4	FSM	ENSMUSG00000040009.7	ENSMUST00000037813.5	3519	4	-45	1000	-45	-991	multi-exon	FALSE	canonical	3	7	junction_1	0.816496580927726	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTAACACAGGATAATTA	NA	False	NA	NA	False	NA	NA	NA	74802963	74851739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_74803215_74814622_74814689_74826765_74827973_74850699
tx.16260	chr6	+	3222	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	2	-1353	2	-4	multi-exon	FALSE	canonical	3	115	junction_1	16.539514973407	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGACTGTGCTTTAAGA	91	False	NA	NA	False	NA	NA	NA	15721087	15802160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
tx.16261	chr6	+	2432	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	10	-2	-1	2	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTCTTTCTATGTCCT	-24	True	NA	NA	False	NA	NA	NA	17065157	17105824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
tx.16262	chr6	+	6824	22	FSM	ENSMUSG00000009376.16	ENSMUST00000115443.8	6809	22	-20	5	-20	-5	multi-exon	FALSE	canonical	1	2	junction_15	4.2527835355745	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGGCTGTAGCTAG	-1	True	NA	NA	False	NA	NA	NA	17463778	17573974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_17464248_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17549030_17549172_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552_17563719_17571370_17571508_17571611
tx.16263	chr6	+	2339	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	49	149	-3	-149	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	1856	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTGGCTAATTTCCTC	-7	True	NA	NA	False	NA	NA	NA	17637030	17666822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
tx.16264	chr6	+	2271	10	FSM	ENSMUSG00000015733.14	ENSMUST00000130606.8	1046	10	-84	-1141	-9	-243	multi-exon	FALSE	canonical	3	30	junction_6	571.076371619613	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATTTTTAAAAATTCAAT	-13	True	NA	NA	False	NA	NA	NA	17637024	17666728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660727_17660827_17662096_17662169_17665049_17665113_17665293
tx.16265	chr6	+	2159	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	-57	-56	-19	0	multi-exon	FALSE	canonical	2	14	junction_6	6.64093674238255	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTCGTCTTCTAT	-4	True	NA	NA	False	NA	NA	NA	17693973	17943021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
tx.16266	chr6	+	2188	16	FSM	ENSMUSG00000029534.18	ENSMUST00000081635.13	2115	16	-18	-55	-18	1	multi-exon	FALSE	canonical	2	9	junction_7	7.93473376995095	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGTGTCGTCTTCTA	-3	True	NA	NA	False	NA	NA	NA	17694012	17943020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
tx.16267	chr6	-	1783	13	FSM	ENSMUSG00000010796.12	ENSMUST00000010940.11	1736	13	-48	1	-44	-1	multi-exon	FALSE	canonical	1	1	junction_4	5.42307313450798	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTGTGCTCATTTGT	11	False	NA	NA	False	NA	NA	NA	18109104	18050963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_18051403_18054526_18054641_18055433_18055540_18071963_18072074_18073760_18073818_18074824_18074901_18075759_18075885_18076503_18076639_18077151_18077264_18103498_18103611_18104774_18104898_18108401_18108502_18108930
tx.16268	chr6	-	5951	23	FSM	ENSMUSG00000000416.17	ENSMUST00000090601.12	5183	23	-25	-743	-3	0	multi-exon	FALSE	canonical	0	0	junction_21	3.78366432211941	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTATTTTGCTGTATTT	-14	True	NA	NA	False	NA	NA	NA	18514845	18366476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_18367616_18374522_18374622_18375935_18376069_18378365_18378430_18380461_18380639_18380966_18381173_18382744_18382924_18388026_18388215_18389081_18389235_18397331_18397432_18397516_18397604_18405182_18405263_18406454_18406551_18408480_18408757_18414180_18414299_18420764_18421017_18423829_18423981_18426034_18426135_18427437_18427642_18433818_18435446_18448246_18448469_18501947_18502056_18514653
tx.16269	chr6	+	762	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	45	0	-17	0	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	266	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	-26	True	NA	NA	False	NA	NA	NA	18848622	18854052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
tx.1627	chr10	+	4720	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	-6	2125	-6	14	multi-exon	FALSE	canonical	3	29	junction_3	6.08751601555753	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTCCCTCTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	74896417	75018628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
tx.16270	chr6	+	2608	11	NIC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	44.129468612255	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	21949552	21974900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_21949793_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
tx.16271	chr6	+	2664	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	-1	1137	-1	-2	multi-exon	FALSE	canonical	3	104	junction_1	20.5043837280255	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	21949568	21974900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
tx.16272	chr6	+	2458	11	ISM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	449	1137	0	-2	3prime_fragment	FALSE	canonical	3	141	junction_5	14.2562267097574	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	-7	True	NA	NA	False	NA	NA	NA	21950018	21974900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
tx.16273	chr6	-	2775	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	132.259924013285	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTAGTAGTTGCAGTGA	-24	True	NA	NA	False	NA	NA	NA	22356145	22306519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339271_22339377_22343264_22343319_22355993
tx.16274	chr6	-	2832	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	-9	3	-9	-3	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	358	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTGTAGTAGTTGCAGT	9	False	22356183	NA	False	NA	NA	NA	22356174	22306521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
tx.16275	chr6	-	2787	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	139.043552079915	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTGTAGTAGTTGCAGT	3	True	NA	NA	False	NA	NA	NA	22356180	22306521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
tx.16276	chr6	-	2910	6	ISM	ENSMUSG00000029695.14	ENSMUST00000031707.14	3701	24	52315	330	46909	-330	3prime_fragment	FALSE	canonical	2	9	junction_1	1.6	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTCTTGAGTTTTTG	4513	False	NA	NA	False	NA	NA	NA	23080670	23072501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_23073090_23074526_23074704_23075160_23075250_23075739_23075856_23077077_23077174_23078826
tx.16277	chr6	-	428	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	451	-4	8	4	multi-exon	FALSE	canonical	3	2597	junction_4	429.359042643799	552	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTTATTGACTT	4	True	NA	NA	False	NA	NA	NA	24527561	24518660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
tx.16278	chr6	-	4333	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	12	7	-9	-7	multi-exon	FALSE	canonical	3	160	junction_7	20.1893536300695	372	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAATAGTGTGTCTCAT	3	True	NA	NA	False	NA	NA	NA	24664996	24613810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
tx.16279	chr6	-	2893	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	2	-205	combination_of_known_junctions	TRUE	canonical	3	22	junction_14	31.693847983481	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTCTGTGTGTGTG	6	True	NA	NA	False	NA	NA	NA	25809219	25743940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
tx.1628	chr10	+	4696	20	ISM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	71053	0	-28715	0	3prime_fragment	FALSE	canonical	3	29	junction_13	5.66663950892411	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGTTTGTGGTGGTTTC	293	False	NA	NA	False	NA	NA	NA	74967476	75020753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
tx.16280	chr6	-	2947	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	-1	205	-1	-205	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTCTGTGTGTGTG	-1	True	NA	NA	False	NA	NA	NA	25809226	25743940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
tx.16281	chr6	-	7267	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	703	5	NA	NA	-5	413	multi-exon	FALSE	canonical	3	14	junction_1	14.5958898324152	13	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACGTTGCTATTTTTA	-11	True	NA	NA	False	NA	NA	NA	28261936	28210593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
tx.16282	chr6	-	4232	6	FSM	ENSMUSG00000039841.15	ENSMUST00000115321.9	2699	6	-14	-1519	-5	-3	multi-exon	FALSE	canonical	3	13	junction_5	13.7927517196533	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTTATCTTTTTGTG	-11	True	NA	NA	False	NA	NA	NA	28261936	28239928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261478
tx.16283	chr6	-	3939	6	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	-5	-8	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	11.0381157812373	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAAGGTGTTATCTTT	-11	True	NA	NA	False	NA	NA	NA	28261936	28239933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
tx.16284	chr6	-	4066	6	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	322	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.2975408183723	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGGTGTTATCTTTTTG	1085	False	NA	NA	False	NA	NA	NA	28261588	28239930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261294
tx.16285	chr6	-	2977	5	FSM	ENSMUSG00000039841.15	ENSMUST00000155494.2	703	5	-23	-2251	-23	-785	multi-exon	FALSE	canonical	3	22	junction_4	12.1937483982572	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTAGTATTATTCAGT	719	False	NA	NA	False	NA	NA	NA	28261954	28242232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
tx.16286	chr6	-	4055	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	7	588	7	-588	multi-exon	FALSE	canonical	3	46	junction_1	0	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTTCTTAATGGTG	-6	True	NA	NA	False	NA	NA	NA	28421716	28416677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_28419300_28420283
tx.16287	chr6	-	3778	3	NNC	ENSMUSG00000029708.10	novel	2859	3	NA	NA	1	-588	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	22.5	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTTCTTAATGGTG	-12	True	NA	NA	False	NA	NA	NA	28421722	28416677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_28419300_28420283_28421382_28421664
tx.16288	chr6	+	1129	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	-13	0	-13	0	multi-exon	TRUE	canonical	3	1725	junction_4	143.712769091685	1005	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	-44	True	NA	NA	False	NA	NA	NA	28423545	28426601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
tx.16289	chr6	+	3473	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	-2	11	-2	-11	multi-exon	FALSE	canonical	3	582	junction_3	55.1049865830108	1593	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	-9	True	NA	NA	False	NA	NA	NA	28480344	28888820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
tx.1629	chr10	+	6067	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	-12	-1330	-12	-6	multi-exon	FALSE	canonical	3	164	junction_1	14.4858551697855	288	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTAGTTTGTTCTCCCT	NA	False	NA	NA	False	NA	NA	NA	75047892	75148227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
tx.16290	chr6	-	4152	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	313	0	313	0	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	-12	True	NA	NA	False	NA	NA	NA	29164692	29123574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
tx.16291	chr6	-	2895	8	ISM	ENSMUSG00000029701.16	ENSMUST00000169214.8	1923	12	16451	-1565	-7338	-1	3prime_fragment	FALSE	canonical	3	180	junction_7	24.4857309551535	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	29138639	29123575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501
tx.16292	chr6	-	2423	14	FSM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	11	3	11	-2	multi-exon	FALSE	canonical	1	70	junction_10	46.9877234375763	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTGATCCTGTTTC	4063	False	29212304	NA	False	NA	NA	NA	29212285	29200438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
tx.16293	chr6	-	2562	15	FSM	ENSMUSG00000003500.14	ENSMUST00000159124.8	2600	15	35	3	2	-2	multi-exon	FALSE	canonical	1	64	junction_14	59.8544152123146	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTGATCCTGTTTC	-10	True	NA	NA	False	NA	NA	NA	29216328	29200438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
tx.16294	chr6	-	2569	15	FSM	ENSMUSG00000003500.14	ENSMUST00000162099.8	2580	15	11	0	0	0	multi-exon	TRUE	canonical	1	42	junction_14	63.7043554080817	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATCCTGTTTCTG	-12	True	NA	NA	False	NA	NA	NA	29216330	29200436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212170_29216070
tx.16295	chr6	+	947	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	34	1	34	-1	multi-exon	FALSE	canonical	3	124	junction_1	0	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTGTCCTGTTGACAT	35	False	NA	NA	False	NA	NA	NA	29272658	29275444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29272810_29274648
tx.16296	chr6	+	3209	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	0	-539	0	-4	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	555	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	-1	True	NA	NA	False	NA	NA	NA	29348117	29376667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
tx.16297	chr6	+	3205	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	17	7	4	-4	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	1080	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	3	True	NA	NA	False	NA	NA	NA	29348121	29376667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
tx.16298	chr6	+	660	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	43	0	43	0	multi-exon	FALSE	canonical	3	1924	junction_1	0	431	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	11	True	NA	NA	False	NA	NA	NA	29467759	29470511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29467974_29470065
tx.16299	chr6	+	2143	9	FSM	ENSMUSG00000029771.13	ENSMUST00000004392.12	2189	9	47	-1	-36	1	multi-exon	FALSE	canonical	3	5	junction_7	3.25720355519885	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGCCCATTTATTGACT	0	True	NA	NA	False	NA	NA	NA	29526670	29537319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29526774_29531124_29531331_29533950_29534141_29534533_29534593_29535039_29535074_29535251_29535510_29535723_29536117_29536202_29536322_29536538
tx.1630	chr10	+	5132	13	ISM	ENSMUSG00000033444.15	ENSMUST00000040105.8	5928	16	15661	1	-15451	-1	3prime_fragment	FALSE	canonical	3	164	junction_1	14.3185485763514	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTTCTCCCTCCCTG	NA	False	NA	NA	False	NA	NA	NA	75081349	75148232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
tx.16300	chr6	-	4193	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	58	0	-10	0	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	1213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	13	True	NA	NA	False	NA	NA	NA	29609828	29540825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
tx.16301	chr6	+	2023	8	FSM	ENSMUSG00000001763.15	ENSMUST00000046750.14	1994	8	-31	2	-31	0	multi-exon	FALSE	canonical	3	27	junction_2	5.15474815790535	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTGTCCTACATCAA	1	True	NA	NA	False	NA	NA	NA	29694189	29718556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29694544_29709939_29709998_29710585_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
tx.16302	chr6	+	2020	8	FSM	ENSMUSG00000001763.15	ENSMUST00000115250.4	1977	8	-43	0	-31	0	multi-exon	FALSE	canonical	3	18	junction_2	7.38172039015075	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTGTCCTACATCAA	1	True	NA	NA	False	NA	NA	NA	29694189	29718556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29694544_29709939_29709998_29710588_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
tx.16303	chr6	+	3924	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	-150	5	41	-5	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGCGTGTTTCTTTTC	33	True	NA	NA	False	NA	NA	NA	29735542	29761359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
tx.16304	chr6	+	5158	17	FSM	ENSMUSG00000029772.18	ENSMUST00000102995.9	5155	17	2	-5	2	0	multi-exon	FALSE	canonical	3	86	junction_2	15.2883738507403	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	-27	True	NA	NA	False	NA	NA	NA	29768480	29912308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
tx.16305	chr6	+	5157	17	FSM	ENSMUSG00000029772.18	ENSMUST00000115242.9	5152	17	-5	0	-5	0	multi-exon	FALSE	canonical	3	14	junction_1	29.2814334305887	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCCTGAGAATACCA	-22	True	NA	NA	False	NA	NA	NA	29768485	29912309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29768906_29863138_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
tx.16306	chr6	+	5367	21	FSM	ENSMUSG00000039629.15	ENSMUST00000046028.12	5370	21	0	3	0	-3	multi-exon	FALSE	canonical	3	5	junction_19	5.0386009963084	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGTCTTTAGTTCTT	-5	True	NA	NA	False	NA	NA	NA	29917011	29959677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29955430_29955636_29956656
tx.16307	chr6	+	3607	13	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	180.170347634306	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACAAAAAGTGCCCCTCTC	-19	True	NA	NA	False	NA	NA	NA	30047995	30153453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
tx.16308	chr6	+	3576	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115212.8	3584	12	4	4	1	-4	multi-exon	FALSE	canonical	3	109	junction_11	130.142642658033	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACAAAAAGTGCCCCTCTC	-24	True	NA	NA	False	NA	NA	NA	30047990	30153453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
tx.16309	chr6	+	2342	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-5	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	163.040383545509	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-19	True	NA	NA	False	NA	NA	NA	30047995	30140887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
tx.1631	chr10	-	2924	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	42	534	-41	8	multi-exon	FALSE	canonical	3	66	junction_3	9.3893556754444	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCACCCTTTGTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	75353173	75342650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
tx.16310	chr6	+	2306	12	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-5	-16	combination_of_known_junctions	FALSE	canonical	3	271	junction_11	90.9985923058862	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-19	True	NA	NA	False	NA	NA	NA	30047995	30140887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
tx.16311	chr6	+	1908	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115206.8	1879	12	-33	4	-4	1	multi-exon	FALSE	canonical	3	122	junction_11	119.561388499108	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	-18	True	NA	NA	False	NA	NA	NA	30047996	30144855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
tx.16312	chr6	+	2300	12	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-2	-16	combination_of_known_junctions	FALSE	canonical	3	218	junction_2	102.024061333144	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-16	True	NA	NA	False	NA	NA	NA	30047998	30140887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
tx.16313	chr6	+	1941	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	175.389309030574	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	-15	True	NA	NA	False	NA	NA	NA	30047999	30144855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
tx.16314	chr6	+	3331	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	176.881080578638	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTATGTTCTTTTCTGT	-12	True	NA	NA	False	NA	NA	NA	30048002	30153181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
tx.16315	chr6	+	3571	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	-4	-272	-4	-6	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGACAAAAAGTGCCCCTC	-18	True	NA	NA	False	NA	NA	NA	30047996	30153451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
tx.16316	chr6	+	2332	13	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	2	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	167.068411636272	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-12	True	NA	NA	False	NA	NA	NA	30048002	30140887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
tx.16317	chr6	+	1929	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	178.740889433715	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTATGGTTTGGGCTTT	-4	True	NA	NA	False	NA	NA	NA	30048010	30144857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
tx.16318	chr6	+	1908	12	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	127.487870108467	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATGTATGGTTTGGGC	-22	True	NA	NA	False	NA	NA	NA	30047992	30144854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
tx.16319	chr6	-	4658	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	-8	7	-8	-7	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	548	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAATGGCTGAACTTGA	-5	True	NA	NA	False	NA	NA	NA	30304546	30211294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
tx.1632	chr10	-	2875	6	NIC	ENSMUSG00000033416.16	novel	2843	6	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	28.7026131214564	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTAGCACCCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	75353716	75342655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75353574
tx.16320	chr6	-	1807	10	FSM	ENSMUSG00000039130.19	ENSMUST00000080812.14	1824	10	13	4	0	0	multi-exon	FALSE	canonical	1	382	junction_8	221.210865270177	1188	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGCTGCTAGAGAATTG	4	True	NA	NA	False	NA	NA	NA	30391009	30366382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
tx.16321	chr6	+	5815	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	22	-1886	-6	-5	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTCCAAGTTGCCATGA	-27	True	NA	NA	False	NA	NA	NA	30401888	30455173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
tx.16322	chr6	+	5900	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	-5	6	-5	-6	multi-exon	TRUE	canonical	3	95	junction_2	43.3720624650147	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTCCAAGTTGCCATG	-26	True	NA	NA	False	NA	NA	NA	30401889	30455172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
tx.16323	chr6	-	3380	14	ISM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	980	7	901	-7	3prime_fragment	FALSE	canonical	3	922	junction_8	37.2406217097062	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCCTTGGTGAAATC	945	False	NA	-49	True	NA	NA	NA	30508802	30481233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664
tx.16324	chr6	-	3426	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	54	5	-5	-5	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	1456	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTTGGTGAAATCAT	-9	True	NA	NA	False	NA	NA	NA	30509728	30481231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
tx.16325	chr6	-	3420	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	27	0	-22	0	multi-exon	FALSE	canonical	3	75	junction_8	9.18095855561934	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTTTGCTATTAATG	-14	True	NA	NA	False	NA	NA	NA	30693721	30653455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
tx.16326	chr6	+	2558	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	3	0	0	0	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	293	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTCCGGCTTCCCCTCC	0	True	NA	NA	False	NA	NA	NA	30738051	30748461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
tx.16327	chr6	-	3135	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-26	852	-1	6	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	217	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGCTATACTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	30873700	30748404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
tx.16328	chr6	+	2453	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	101	8841	0	2	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	919	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTATATTTTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	31375770	31484905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
tx.16329	chr6	-	5328	8	FSM	ENSMUSG00000025608.10	ENSMUST00000026698.8	5379	8	46	5	46	-5	multi-exon	FALSE	canonical	3	33	junction_2	7.96164273891016	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTCAGGCCCTAGTGT	NA	False	NA	NA	False	NA	NA	NA	31540870	31496427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
tx.1633	chr10	+	654	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	467	1915	4	48	multi-exon	FALSE	canonical	3	3512	junction_3	116.998575489904	790	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGGCTTTTTTGTTT	1869	False	NA	-56	True	NA	NA	NA	75353851	75371300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
tx.16330	chr6	-	1528	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	16	6	-7	1	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCATTTTCTGACTAAGA	NA	False	NA	NA	False	NA	NA	NA	33037179	32769157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
tx.16331	chr6	+	4781	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	43	0	0	0	multi-exon	FALSE	canonical	3	107	junction_11	15.4671210608191	254	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGTATGTTGTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	33226062	33950914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
tx.16332	chr6	-	3642	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	116	2495	-25	848	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	403	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	34153930	34132809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
tx.16333	chr6	-	1382	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	5	0	5	0	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	487	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	NA	False	NA	NA	False	NA	NA	NA	34294408	34280868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
tx.16334	chr6	+	1330	10	FSM	ENSMUSG00000061758.14	ENSMUST00000038383.14	1371	10	43	-2	12	2	multi-exon	TRUE	canonical	3	14	junction_8	4.10960933531265	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCAACTGTCAGAATAC	3049	False	NA	NA	False	NA	NA	NA	34361195	34373887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_34361343_34364606_34364775_34365710_34365828_34366989_34367068_34368951_34369075_34369323_34369431_34369849_34369932_34370992_34371077_34371661_34371745_34373546
tx.16335	chr6	+	1643	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	98	479	-51	-479	multi-exon	FALSE	canonical	3	82	junction_2	7.5	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGCCTCGAGTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	34453239	34482069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_34453358_34464224_34464886_34481205
tx.16336	chr6	+	4034	12	FSM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	3	4	3	1	multi-exon	FALSE	canonical	3	149	junction_3	28.0630930241598	332	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCTCGTGCATTC	1260	False	NA	NA	False	NA	NA	NA	34686379	34752404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
tx.16337	chr6	-	2651	15	FSM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	31	0	-3	0	multi-exon	FALSE	canonical	2	55	junction_12	11.4653426304081	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5807	False	NA	NA	False	NA	NA	NA	34887780	34857360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
tx.16338	chr6	-	2803	16	NIC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_14	24.5335144920848	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5806	False	NA	NA	False	NA	NA	NA	34887781	34857360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886611_34886763_34887631
tx.16339	chr6	-	4420	7	ISM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	39	12406	-1	11835	5prime_fragment	FALSE	canonical	2	55	junction_4	9.69106117340442	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCCGTGGTGTTTCA	5815	False	NA	NA	False	NA	NA	NA	34887772	34869766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
tx.1634	chr10	+	2263	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-49	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	105.112985857687	70	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTTAGTGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	75399932	75422030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
tx.16340	chr6	+	1235	7	NIC	ENSMUSG00000029848.12	novel	1207	8	NA	NA	-56	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	23.8607068908977	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTTTGGTGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	34897838	34916275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_34897990_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
tx.16341	chr6	+	1512	9	FSM	ENSMUSG00000029848.12	ENSMUST00000114999.8	1455	9	-56	-1	-56	1	multi-exon	FALSE	canonical	1	14	junction_3	19.2272592950738	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTCCTGGCAG	NA	False	NA	NA	False	NA	NA	NA	34897838	34916278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_34897990_34904653_34904852_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
tx.16342	chr6	-	3510	12	FSM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	-31	-6	4	0	multi-exon	FALSE	canonical	3	79	junction_2	43.8453329687493	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	7650	False	NA	NA	False	NA	NA	NA	35110655	34998999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
tx.16343	chr6	-	3291	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202143.4	3202	11	-90	1	0	0	multi-exon	FALSE	canonical	3	23	junction_1	54.0722664588789	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGTGAGTCTTGTT	7655	False	NA	NA	False	NA	NA	NA	35110650	34999000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
tx.16344	chr6	-	3685	11	FSM	ENSMUSG00000038784.14	ENSMUST00000044163.10	3337	11	-8	-340	1	340	multi-exon	FALSE	canonical	3	46	junction_4	56.4779603031129	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAATTCAATTATGGGTT	7647	False	NA	NA	False	NA	NA	NA	35110658	35021549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
tx.16345	chr6	-	3671	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	4	-379	4	338	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTAATTCAATTATGGG	7650	False	NA	NA	False	NA	NA	NA	35110655	35021551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
tx.16346	chr6	+	6228	43	FSM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	187	-3	1	3	multi-exon	FALSE	canonical	2	193	junction_5	62.1117418909309	370	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGGTCATTCTTT	NA	False	NA	NA	False	NA	NA	NA	35154551	35224534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
tx.16347	chr6	+	2407	15	FSM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	3	-1	3	1	multi-exon	FALSE	canonical	2	193	junction_5	41.0390555645796	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTATTCCTTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	35154553	35182589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
tx.16348	chr6	+	6454	43	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	79	3	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_1	74.8991347445852	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGGTCATTCTTT	NA	False	NA	NA	False	NA	NA	NA	35154642	35224534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
tx.16349	chr6	+	625	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	39	1857	-23	2	multi-exon	FALSE	canonical	3	978	junction_2	33.5	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGGTGAATTAATCCA	NA	False	NA	NA	False	NA	NA	NA	35229627	35238574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_35229718_35237344_35237399_35238093
tx.1635	chr10	+	2268	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-55	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.4297600962574	163	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGACTTTAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	75399926	75422026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
tx.16350	chr6	+	8221	2	NIC	ENSMUSG00000073155.13	novel	1232	3	NA	NA	7	1	intron_retention	FALSE	canonical	3	978	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGTGAATTAATCC	NA	False	NA	NA	False	NA	NA	NA	35229657	35238573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_35237399_35238093
tx.16351	chr6	-	3745	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	58	157	-31	-157	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	935	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTTAGCAACATATT	4206	False	NA	NA	False	NA	NA	NA	35516765	35485997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
tx.16352	chr6	-	3353	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-17	3746	-17	3291	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTACACTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	37419098	37307935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
tx.16353	chr6	-	2618	11	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40981	3170	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	25.5556256037687	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	7991	False	NA	NA	False	NA	NA	NA	37354451	37308056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37354383
tx.16354	chr6	+	1667	3	Intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	4.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTACTTTTTTTTGGAC	NA	False	NA	NA	False	NA	NA	NA	37419445	37424348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_+_37419969_37422999_37423146_37423350
tx.16355	chr6	+	4045	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	-6	3	-6	-3	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGTTATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	37847739	37943228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
tx.16356	chr6	+	3938	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	0	2	0	-2	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	921	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGGTTATTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	37847745	37943229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
tx.16357	chr6	+	4854	10	ISM	ENSMUSG00000029833.18	ENSMUST00000120238.2	3258	19	46093	-364	-1979	0	3prime_fragment	FALSE	canonical	3	465	junction_1	57.5962961772138	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	37923514	37943231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
tx.16358	chr6	-	2853	22	NIC	ENSMUSG00000038600.13	novel	3307	22	NA	NA	128	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	2.77582697938851	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGATGTCGTTATTC	NA	False	NA	NA	False	NA	NA	NA	38073992	38025417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_38025534_38025916_38026019_38027400_38027573_38028378_38028497_38029944_38030053_38031489_38031592_38035659_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
tx.16359	chr6	-	6854	20	FSM	ENSMUSG00000063455.17	ENSMUST00000169256.5	10968	20	-296	4410	-296	-1566	multi-exon	FALSE	canonical	2	8	junction_10	11.4859905031884	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATGTTGGTGGTTTCA	NA	False	NA	NA	False	NA	NA	NA	38231240	38104520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_38105511_38107716_38107863_38113768_38113930_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
tx.1636	chr10	-	2887	13	FSM	ENSMUSG00000006342.16	ENSMUST00000077610.6	2275	13	-30	-582	-2	77	multi-exon	FALSE	canonical	1	3	junction_12	20.894410470001	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCTGCCTGCTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	75479844	75472462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75479707
tx.16360	chr6	-	6554	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	-16	-2	-16	2	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTATGTATAGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	38276210	38264328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
tx.16361	chr6	-	5267	13	FSM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	-330	7	0	-7	multi-exon	TRUE	canonical	3	16	junction_3	27.2865453210104	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATTTGGTCTGTTTA	9664	False	NA	NA	False	NA	NA	NA	38331538	38282227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
tx.16362	chr6	-	2289	6	ISM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	21448	0	21118	0	3prime_fragment	FALSE	canonical	3	66	junction_3	10.1469207151727	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	9661	False	NA	NA	False	NA	NA	NA	38310090	38292602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076
tx.16363	chr6	-	3400	9	FSM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	12.2212673238089	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	9664	False	NA	NA	False	NA	NA	NA	38331538	38292602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
tx.16364	chr6	+	4172	18	FSM	ENSMUSG00000056832.15	ENSMUST00000162554.8	4195	18	20	3	20	-3	multi-exon	FALSE	canonical	3	24	junction_11	3.0576920984393	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTTCATGTTTAT	3505	False	NA	NA	False	NA	NA	NA	38358423	38404579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
tx.16365	chr6	+	4508	17	FSM	ENSMUSG00000038538.18	ENSMUST00000160583.8	14644	17	-27	10163	-27	21	multi-exon	FALSE	canonical	3	23	junction_13	12.8900094550004	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	38410857	38479535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475622_38475855_38476121_38476212_38479172
tx.16366	chr6	+	4557	18	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-25	21	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	13.1069595079581	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	38410859	38479535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
tx.16367	chr6	+	459	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	19	1	19	0	multi-exon	FALSE	canonical	3	741	junction_1	0	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTGGTTTTTGTGTGC	9948	False	NA	NA	False	NA	NA	NA	38511776	38516383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_38511946_38516093
tx.16368	chr6	+	5087	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-20	2319	-20	784	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTAGGTGTTGAAAAG	NA	False	NA	NA	False	NA	NA	NA	38528379	38584086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
tx.16369	chr6	+	5057	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	-18	-786	-18	786	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGTGTTGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	38528381	38584088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
tx.1637	chr10	-	3182	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	-31	0	-14	0	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTCCCGTCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	75479856	75472539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
tx.16370	chr6	+	1653	2	FSM	ENSMUSG00000029823.17	ENSMUST00000160922.5	3448	2	-77	1872	-11	-1741	multi-exon	FALSE	canonical	3	85	junction_1	0	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTATAGACCCAAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	38528388	38533112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_38528844_38531914
tx.16371	chr6	-	2270	5	FSM	ENSMUSG00000071537.7	ENSMUST00000096030.7	2276	5	-23	29	-14	-29	multi-exon	TRUE	canonical	3	11	junction_3	4.14578098794425	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGACCTTCACAAGATGGT	NA	False	NA	NA	False	NA	NA	NA	38614191	38603623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_38604661_38605019_38605124_38606698_38606845_38607215_38607318_38613310
tx.16372	chr6	-	4920	15	FSM	ENSMUSG00000061436.16	ENSMUST00000161779.8	7684	15	-44	2808	-44	682	multi-exon	FALSE	canonical	2	8	junction_4	5.39131955374677	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCATGGAACCAATGTGG	NA	False	NA	NA	False	NA	NA	NA	38853143	38674132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
tx.16373	chr6	-	6995	15	NIC	ENSMUSG00000061436.16	novel	7684	15	NA	NA	-130	-816	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	6.44323723934242	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGCTGTGTGTATATGA	NA	False	NA	NA	False	NA	NA	NA	38853229	38672140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698530_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
tx.16374	chr6	-	6790	15	FSM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	-284	-2639	-42	-855	multi-exon	FALSE	canonical	2	8	junction_4	5.22601420681153	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTGTTTTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	38853141	38672179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
tx.16375	chr6	-	1848	2	ISM	ENSMUSG00000061436.16	ENSMUST00000160360.2	3907	15	-261	120011	-67	7	5prime_fragment	FALSE	canonical	3	22	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTTTTGTTTATGTAT	NA	False	NA	NA	False	NA	NA	NA	38853166	38794834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_38796249_38852732
tx.16376	chr6	-	3665	12	FSM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	-436	2	-436	-2	multi-exon	FALSE	canonical	3	16	junction_11	5.37671748458954	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGACTGGAGTTTATT	NA	False	NA	NA	False	NA	NA	NA	39095719	39063345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
tx.16377	chr6	-	6349	20	FSM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	-33	3250	-33	2237	multi-exon	FALSE	canonical	3	12	junction_10	4.65544092368336	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	39183756	39116806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211_39150373_39152296_39152415_39158461_39158548_39183374
tx.16378	chr6	-	4171	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_15	85.4180308834148	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATTTTGCCCTTAAGT	NA	False	NA	NA	False	NA	NA	NA	39354628	39311707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
tx.16379	chr6	-	3904	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	-20	-1215	-17	3	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	39354626	39311703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
tx.1638	chr10	-	7427	37	FSM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	-9	-1	-9	1	multi-exon	FALSE	canonical	3	63	junction_35	14.4571258434836	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTTGCTCATCC	NA	False	NA	NA	False	NA	NA	NA	75600159	75481944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
tx.16380	chr6	-	4129	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_14	84.3388930973658	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	39354624	39311703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39354552
tx.16381	chr6	-	4045	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-15	0	-15	0	multi-exon	FALSE	canonical	3	160	junction_14	38.6108925098626	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	NA	False	NA	NA	NA	39354624	39311706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
tx.16382	chr6	-	4305	18	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-9	3	combination_of_known_junctions	TRUE	canonical	3	23	junction_15	99.4312546157579	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	39354618	39311703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
tx.16383	chr6	-	4185	17	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_14	89.544681584112	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	NA	False	NA	NA	NA	39354624	39311706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
tx.16384	chr6	-	2101	13	ISM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-15	8846	-15	291	5prime_fragment	FALSE	canonical	3	160	junction_12	41.2501683498248	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACTGTATAATTAAA	NA	False	NA	NA	False	NA	NA	NA	39354624	39320552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
tx.16385	chr6	-	2246	4	ISM	ENSMUSG00000029922.16	ENSMUST00000114823.8	2992	8	18202	0	3156	0	3prime_fragment	FALSE	canonical	3	1453	junction_3	55.6496980125579	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	NA	False	NA	NA	NA	39378508	39374737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143
tx.16386	chr6	-	2910	8	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_7	1165.4745726921	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	NA	False	NA	NA	NA	39397001	39374737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
tx.16387	chr6	-	3034	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	12	0	12	0	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	1650	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	NA	False	NA	NA	NA	39397384	39374737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
tx.16388	chr6	-	2911	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	1397.39899784695	81	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTCTTGTGTGATGACC	NA	False	NA	NA	False	NA	NA	NA	39397386	39374738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_39376245_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
tx.16389	chr6	-	899	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	-152	4	12	-4	multi-exon	FALSE	canonical	3	4055	junction_2	144.5	717	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTCTCCGAATGCTG	NA	False	NA	NA	False	NA	NA	NA	39397384	39382476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_39382895_39387021_39387151_39397032
tx.1639	chr10	-	1822	6	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	107032	-1	10548	1	3prime_fragment	FALSE	canonical	3	93	junction_4	10.4804580052591	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTTGCTCATCC	NA	False	NA	NA	False	NA	NA	NA	75493118	75481944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608
tx.16390	chr6	-	4435	19	FSM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	36	-3	36	3	multi-exon	FALSE	canonical	3	100	junction_17	14.1962653756995	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTAGTGAGTGTATAAT	NA	False	NA	NA	False	NA	NA	NA	39534765	39439308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
tx.16391	chr6	-	4548	20	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	26	4	combination_of_known_junctions	TRUE	canonical	3	8	junction_18	37.2191235508675	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	NA	False	NA	NA	NA	39534775	39439307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504415_39504518_39534508
tx.16392	chr6	-	4245	18	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	26	4	combination_of_known_splicesites	FALSE	canonical	3	24	junction_14	27.1251106227713	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	NA	False	NA	NA	NA	39534775	39439307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39483634_39483757_39485175_39485304_39499589_39500694_39534508
tx.16393	chr6	-	4384	15	ISM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	29	4931	29	895	5prime_fragment	FALSE	canonical	3	100	junction_13	14.3199589555905	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCTGTCTTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	39534772	39444242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
tx.16394	chr6	+	2521	8	FSM	ENSMUSG00000046947.13	ENSMUST00000140364.8	3542	8	3	1018	3	-1	multi-exon	FALSE	canonical	3	19	junction_2	10.7437689582647	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTTCTTCTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	39550809	39564685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560744_39560997_39562660_39562790_39563774_39563829_39564302
tx.16395	chr6	+	451	4	FSM	ENSMUSG00000002416.14	ENSMUST00000135671.8	4371	4	2	3918	2	-7	multi-exon	FALSE	canonical	3	748	junction_3	834.773555456142	374	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGAGTTATGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	39569509	39576398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_39569647_39573384_39573530_39575199_39575296_39576325
tx.16396	chr6	-	9562	20	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	7.35788720728475	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTAAGATTATTTTTC	6448	False	NA	NA	False	NA	NA	NA	39702390	39580173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
tx.16397	chr6	-	4808	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-1	2383	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	7.19481981002759	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTCTGGGCCTTT	6440	False	NA	NA	False	NA	NA	NA	39702398	39588662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
tx.16398	chr6	-	634	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	95	378	0	10	multi-exon	FALSE	canonical	3	1131	junction_2	267.5	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGGAATGGCTGTTAG	NA	False	NA	NA	False	NA	NA	NA	39787827	39779115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_39779479_39782304_39782546_39787797
tx.16399	chr6	-	570	3	NNC	ENSMUSG00000029918.10	novel	1107	3	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	527.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGGAATGGCTGTTAG	NA	False	NA	NA	False	NA	NA	NA	39787826	39779115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_39779479_39782367_39782546_39787797
tx.1640	chr10	-	7335	37	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	18.2485201497086	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTTTGCTCATCCT	NA	False	NA	NA	False	NA	NA	NA	75600153	75481943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549373_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
tx.16400	chr6	+	2208	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	323	0	8	0	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	662	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTGTAATCTAAATGCA	NA	False	NA	NA	False	NA	NA	NA	40302428	40373696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
tx.16401	chr6	-	6751	9	FSM	ENSMUSG00000037172.15	ENSMUST00000101492.10	6742	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	15	junction_1	5.09748712602592	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGCTGTGATCTTT	NA	False	NA	NA	False	NA	NA	NA	40413078	40378308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_40383869_40385202_40385272_40385992_40386144_40386275_40386408_40388539_40388679_40395425_40395580_40399659_40399819_40400657_40400758_40412791
tx.16402	chr6	+	635	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	58	3705	-5	0	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	40448343	40457929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
tx.16403	chr6	+	958	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	-22	-3	0	0	multi-exon	FALSE	canonical	3	282	junction_1	935.620961358462	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	40448386	40457929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
tx.16404	chr6	+	3735	5	NIC	ENSMUSG00000029911.15	novel	1188	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2472	junction_2	182.612123091541	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	40448385	40457929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
tx.16405	chr6	+	1201	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	-13	0	2	0	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	40448388	40457929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
tx.16406	chr6	+	3751	18	FSM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	9	2	9	0	multi-exon	TRUE	canonical	2	8	junction_2	4.47522978861417	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGTGTGTCCATGCCTC	337	False	NA	NA	False	NA	NA	NA	41582424	41597441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
tx.16407	chr6	+	2110	12	ISM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	10482	6	1272	-4	3prime_fragment	FALSE	canonical	2	10	junction_3	3.9772077916777	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGAGGTGTGTCCATG	2739	False	NA	NA	False	NA	NA	NA	41592897	41597437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
tx.16408	chr6	+	3684	11	ISM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	-77	-2016	-13	0	intron_retention	FALSE	canonical	3	27	junction_8	35.6869724129128	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	42241976	42259442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017
tx.16409	chr6	+	3563	12	FSM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	-108	-2016	27	0	multi-exon	FALSE	canonical	3	27	junction_8	34.7888554397801	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	42241945	42259442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
tx.1641	chr10	-	2137	11	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	-9	96782	-9	7172	5prime_fragment	FALSE	canonical	3	63	junction_9	9.60676844729798	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGAGCTGCCTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	75600159	75578727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
tx.16410	chr6	+	3484	11	FSM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	44	1	-27	-1	multi-exon	FALSE	canonical	3	71	junction_8	18.1	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	42241962	42259441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
tx.16411	chr6	+	3552	11	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	35.1573605380154	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	42241953	42259442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
tx.16412	chr6	+	2456	10	FSM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	-18	167	-18	3	multi-exon	FALSE	canonical	3	26	junction_4	4.64545443563708	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTAGTACTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	42326743	42335329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
tx.16413	chr6	-	4334	8	FSM	ENSMUSG00000029851.6	ENSMUST00000031879.5	4497	8	163	0	163	0	multi-exon	FALSE	canonical	0	0	junction_1	1.16057691494799	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTTCTTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	42622025	42599949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_42601550_42603050_42603389_42604207_42604448_42604852_42605067_42605955_42606054_42606334_42607330_42619402_42620040_42621813
tx.16414	chr6	+	5429	15	FSM	ENSMUSG00000033542.14	ENSMUST00000031750.14	5469	15	40	0	40	0	multi-exon	TRUE	canonical	0	0	junction_11	2.0861545523586	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTCAGGTTACTTA	6864	False	NA	NA	False	NA	NA	NA	43242555	43266254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_43242678_43249238_43252360_43252873_43252932_43253470_43253533_43253737_43253992_43256376_43256538_43257094_43257248_43257531_43257662_43257884_43257960_43258356_43258447_43260107_43260266_43260826_43260989_43262292_43262364_43264473_43264579_43265547
tx.16415	chr6	-	2958	8	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-209	5	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	11.1721227405812	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCTGTGGTATTAAGTT	NA	False	NA	NA	False	NA	NA	NA	43603109	43321929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43602626
tx.16416	chr6	-	2607	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	66	-2	7	2	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAATGCTGTGGTATTAA	NA	False	NA	NA	False	NA	NA	NA	43643146	43321932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
tx.16417	chr6	-	2807	7	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-210	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.7521516692735	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCAATGCTGTGGTATT	NA	False	NA	NA	False	NA	NA	NA	43603110	43321934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_43323835_43400554_43400667_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43602626
tx.16418	chr6	-	3793	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTCAAAATACCAAGCAT	NA	False	NA	NA	False	NA	NA	NA	47167423	47158275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr6_-_47161996_47167350
tx.16419	chr6	-	2488	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	22	junction_1	0	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGGTGATTTATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	47167374	47161079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr6_-_47161996_47165802
tx.1642	chr10	-	645	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	7	-3	7	0	multi-exon	FALSE	canonical	3	462	junction_2	12	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTCTTTGCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	75609241	75607063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75607341_75608571_75608748_75609049
tx.16420	chr6	-	4140	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGTTGGTCTGCTAGT	NA	False	NA	NA	False	NA	NA	NA	47167374	47163092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr6_-_47167209_47167350
tx.16421	chr6	+	1767	4	FSM	ENSMUSG00000039419.18	ENSMUST00000199100.5	6279	4	-6	4518	-6	121	multi-exon	FALSE	canonical	3	21	junction_1	8.01387685344754	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGAATCATGTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	47221314	47276625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_47221484_47248073_47248314_47273652_47273734_47275348
tx.16422	chr6	+	3080	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-20	18	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTGTTTTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	47430817	47503010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
tx.16423	chr6	+	3167	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	-13	7	-13	-7	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	653	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAAGTGTATATTCCCA	NA	False	NA	NA	False	NA	NA	NA	47431240	47503066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
tx.16424	chr6	-	2535	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-11	43	combination_of_known_junctions	TRUE	canonical	3	443	junction_6	133.55213528621	449	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	NA	False	NA	NA	NA	47571975	47507209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
tx.16425	chr6	-	2662	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	-12	137	-12	43	multi-exon	FALSE	canonical	3	406	junction_7	166.792654135859	495	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	NA	False	NA	NA	NA	47571976	47507209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
tx.16426	chr6	-	2357	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	41	1	-25	-1	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	2409	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTTTGCCTTTTATTT	8931	False	NA	NA	False	NA	NA	NA	47790323	47773075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
tx.16427	chr6	-	2870	4	FSM	ENSMUSG00000051499.8	ENSMUST00000058844.6	3191	4	324	-3	25	3	multi-exon	FALSE	canonical	3	13	junction_2	4.64279609239471	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCGTTTGGGTTTGCTTT	6044	False	NA	NA	False	NA	NA	NA	47807477	47796196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_47798636_47801974_47802131_47803895_47804023_47807329
tx.16428	chr6	+	3442	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	33	-569	2	569	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTGTTGTACTTTGA	NA	False	NA	NA	False	NA	NA	NA	47812630	47845191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
tx.16429	chr6	+	6682	5	FSM	ENSMUSG00000062519.14	ENSMUST00000114598.3	8328	5	-8	1654	-8	-1654	multi-exon	FALSE	canonical	1	1	junction_1	10.0343161201947	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	47812620	47848817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_47812855_47835862_47835990_47836352_47836467_47840037_47840152_47842724
tx.1643	chr10	-	1577	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	297	6	-67	-6	multi-exon	FALSE	canonical	3	19	junction_4	2.34520787991171	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAATGGTTTTGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	75616951	75609954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
tx.16430	chr6	+	3680	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	377	1516	-75	-1516	multi-exon	TRUE	canonical	3	24	junction_5	6.34388666033558	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATGTTCCCAAAGCT	NA	False	NA	NA	False	NA	NA	NA	47854514	47883903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
tx.16431	chr6	+	2647	5	NNC	ENSMUSG00000052763.8	novel	2801	5	NA	NA	146	-5	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	63.3141966702571	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTTCACAGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	47897555	47909568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907647
tx.16432	chr6	+	2663	5	FSM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	133	5	133	-5	multi-exon	FALSE	canonical	3	116	junction_4	25.1445819213603	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTTCACAGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	47897542	47909568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907644
tx.16433	chr6	+	2745	5	FSM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	13	3	13	0	multi-exon	FALSE	canonical	3	26	junction_2	2.77263412660235	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCCCTGTCTTGCCTTG	9726	False	NA	NA	False	NA	NA	NA	47930336	47942231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255
tx.16434	chr6	-	3240	6	NIC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-111	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	38.9122088810183	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGAGTGTTTCCTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	48024839	48001137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565
tx.16435	chr6	-	3496	6	FSM	ENSMUSG00000071477.11	ENSMUST00000114583.8	3111	6	-400	15	397	2	multi-exon	FALSE	canonical	3	22	junction_5	40.7401521843009	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGTTTCCTGTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	48025448	48001136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024919
tx.16436	chr6	-	3730	7	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	266	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	52.1197872426799	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGTTTCCTGTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	48025579	48001136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48022430_48022534_48024919
tx.16437	chr6	-	3218	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	-33	-1	-33	1	multi-exon	FALSE	canonical	3	42	junction_5	33.5463857963865	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGAGTGTTTCCTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	48025878	48001137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
tx.16438	chr6	-	2968	5	ISM	ENSMUSG00000071477.11	ENSMUST00000114583.8	3111	6	3412	15	-459	2	3prime_fragment	FALSE	canonical	3	96	junction_1	18.0623918681884	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGTTTCCTGTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	48021636	48001136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777
tx.16439	chr6	-	3681	7	FSM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	-30	0	-30	0	multi-exon	FALSE	canonical	3	32	junction_1	32.8988348324577	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1020	False	NA	NA	False	NA	NA	NA	48063557	48039328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
tx.1644	chr10	-	1015	6	NNC	ENSMUSG00000033318.8	novel	2254	6	NA	NA	-702	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	16.6805275695944	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCCTTTTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75671417	75667680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008_75670242_75671296
tx.16440	chr6	-	3687	7	FSM	ENSMUSG00000057691.9	ENSMUST00000203609.3	3648	7	-39	0	-39	0	multi-exon	FALSE	canonical	3	21	junction_1	36.5714673238882	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1011	False	NA	NA	False	NA	NA	NA	48063566	48039328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
tx.16441	chr6	-	1437	6	ISM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	-52	3742	-52	74	5prime_fragment	FALSE	canonical	3	96	junction_1	16.8760184877832	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGCTCATTCCCTG	998	False	NA	NA	False	NA	NA	NA	48063579	48043070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
tx.16442	chr6	+	4007	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114572.9	4323	18	-248	564	4	-2	multi-exon	FALSE	canonical	3	26	junction_1	12.6595014032365	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGCCATTGGCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	48372551	48393836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
tx.16443	chr6	+	4006	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	47	2642	1	-1	multi-exon	FALSE	canonical	3	25	junction_1	12.8178616724737	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCCATTGGCTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	48372566	48393837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
tx.16444	chr6	-	2256	2	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-24	2173	multi-exon	FALSE	non_canonical	0	0	junction_1	0	536	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGCTGGAAAAATGGCT	NA	False	NA	NA	False	NA	NA	NA	48502048	48499314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr6_-_48500391_48500868
tx.16445	chr6	+	1735	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	47	7	-3	-7	multi-exon	FALSE	canonical	3	94	junction_1	1.24721912892465	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAATGTCTGGCCTCTG	6251	False	NA	NA	False	NA	NA	NA	48514595	48518728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
tx.16446	chr6	+	2870	3	FSM	ENSMUSG00000073096.12	ENSMUST00000203627.2	666	3	-11	-2193	7	0	multi-exon	FALSE	canonical	1	2	junction_1	6.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCTTGGTCATGGTAT	8301	False	NA	NA	False	NA	NA	NA	48531751	48547656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48531896_48533888_48534029_48545070
tx.16447	chr6	+	2921	3	FSM	ENSMUSG00000073096.12	ENSMUST00000114545.8	2913	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	10	junction_1	2.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCTTGGTCATGGTAT	8271	False	NA	NA	False	NA	NA	NA	48531721	48547656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48531917_48533888_48534029_48545070
tx.16448	chr6	+	2755	2	FSM	ENSMUSG00000073096.12	ENSMUST00000153222.2	374	2	17	-2398	5	2	multi-exon	FALSE	canonical	3	5	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGGTCATGGTATTT	8299	False	NA	NA	False	NA	NA	NA	48531749	48547658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48531917_48545070
tx.16449	chr6	+	3044	3	FSM	ENSMUSG00000052751.17	ENSMUST00000135151.3	3057	3	13	0	13	0	multi-exon	FALSE	canonical	3	22	junction_1	9.5	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	48570846	48576015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48570987_48571795_48571911_48573226
tx.1645	chr10	-	574	3	FSM	ENSMUSG00000033307.8	ENSMUST00000038169.8	544	3	-32	2	-32	-2	multi-exon	FALSE	canonical	3	12818	junction_1	2119	2115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTTGCCTCAGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	75696106	75695188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75695378_75695520_75695694_75695894
tx.16450	chr6	+	3125	3	NNC	ENSMUSG00000052751.17	novel	3145	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	12.5	36	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	48570833	48576015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_48570987_48571724_48571911_48573229
tx.16451	chr6	+	2931	2	FSM	ENSMUSG00000052751.17	ENSMUST00000163452.7	2959	2	28	0	11	0	multi-exon	FALSE	canonical	3	7	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	48570844	48576015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48570987_48573226
tx.16452	chr6	+	3120	3	FSM	ENSMUSG00000052751.17	ENSMUST00000118229.2	3138	3	17	1	8	0	multi-exon	FALSE	canonical	3	41	junction_2	5	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	48570841	48576015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48570987_48571724_48571911_48573226
tx.16453	chr6	+	3055	3	NNC	ENSMUSG00000052751.17	novel	3057	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	2	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	48570833	48576016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_48570987_48571795_48571911_48573229
tx.16454	chr6	+	3568	2	FSM	ENSMUSG00000052751.17	ENSMUST00000150030.2	989	2	-122	-2457	-122	-1	multi-exon	FALSE	canonical	3	41	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGCTGGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	48571130	48576014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48571911_48573226
tx.16455	chr6	+	2497	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	-33	1679	-33	-1679	multi-exon	FALSE	canonical	3	52	junction_2	4.5	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTCACTGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	48578963	48598482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48579055_48590111_48590194_48596158
tx.16456	chr6	+	4588	3	ISM	ENSMUSG00000053297.15	ENSMUST00000095938.10	3517	4	947	-4	-224	0	3prime_fragment	FALSE	canonical	3	5	junction_1	3.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTATGTGGAGCGGTCC	2622	False	NA	NA	False	NA	NA	NA	48604644	48610623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_48606939_48607105_48607250_48608473
tx.16457	chr6	+	1788	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	6	-410	6	-5	multi-exon	FALSE	canonical	3	46	junction_1	0	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGACATTGTGGCATAT	1295	False	NA	NA	False	NA	NA	NA	48653068	48656043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_48653189_48654375
tx.16458	chr6	-	668	3	Intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_2	7	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGTGCATTACTAGT	NA	False	NA	NA	False	NA	NA	NA	48999404	48995445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_-_48995945_48997387_48997456_48999303
tx.16459	chr6	+	2303	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	-1	1399	-1	-1399	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGTGTGATTATTATAT	NA	False	NA	NA	False	NA	NA	NA	49013547	49033717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
tx.1646	chr10	-	6001	8	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	20	-8	-5	0	intron_retention	FALSE	canonical	3	799	junction_7	124.874140719399	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	6884	False	NA	NA	False	NA	NA	NA	75757428	75732602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633
tx.16460	chr6	+	559	3	FSM	ENSMUSG00000029815.13	ENSMUST00000114500.3	2587	3	-18	2046	-18	27	multi-exon	FALSE	canonical	3	89	junction_1	380.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTGATATGACT	330	False	NA	NA	False	NA	NA	NA	49050763	49061639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_49051038_49059778_49059861_49061436
tx.16461	chr6	+	729	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	46	2044	-7	29	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCTTTGATATGACTGA	341	False	NA	NA	False	NA	NA	NA	49050774	49061641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
tx.16462	chr6	-	3811	14	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	1507	-4	711	4	3prime_fragment	FALSE	canonical	3	468	junction_8	38.3789883342713	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGTAGTATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	49190384	49062152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200
tx.16463	chr6	-	4217	15	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-13	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	136.261752910061	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTAGTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	49191108	49062153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49190578
tx.16464	chr6	-	4245	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	103	-3	103	3	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	724	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTAGTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	49191788	49062153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
tx.16465	chr6	-	3455	10	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	97524	3	-6333	-3	3prime_fragment	FALSE	canonical	3	468	junction_8	42.4485163840843	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACAGCTTCTGTAGTA	NA	False	NA	NA	False	NA	NA	NA	49094367	49062159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085
tx.16466	chr6	-	1817	8	FSM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	-11	-7	-8	3	multi-exon	FALSE	canonical	3	256	junction_7	100.796420409392	289	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4582	False	NA	NA	False	NA	NA	NA	49240975	49220854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
tx.16467	chr6	-	1008	3	ISM	ENSMUSG00000029817.12	ENSMUST00000203820.3	2090	9	18407	-3	18406	3	3prime_fragment	FALSE	canonical	3	544	junction_2	21.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	NA	False	NA	NA	False	NA	NA	NA	49222538	49220854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_49221666_49221801_49221870_49222409
tx.16468	chr6	-	4174	7	ISM	ENSMUSG00000029817.12	ENSMUST00000203820.3	2090	9	8934	-2	8933	2	intron_retention	FALSE	canonical	3	375	junction_6	71.4531703674201	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTCTCTTTATTTGAT	4598	False	NA	NA	False	NA	NA	NA	49232011	49220855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315
tx.16469	chr6	-	2418	8	NIC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-17	2	intron_retention	FALSE	canonical	3	123	junction_7	139.301024799547	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTCTCTTTATTTGAT	4573	False	NA	NA	False	NA	NA	NA	49240984	49220855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49230043_49240771
tx.1647	chr10	-	1635	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	21	4	-7	0	multi-exon	FALSE	canonical	3	255	junction_7	283.203990084886	270	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTGCAGTAGCATAAA	6882	False	NA	NA	False	NA	NA	NA	75757430	75732606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
tx.16470	chr6	+	2399	4	NIC	ENSMUSG00000050786.9	novel	2372	4	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	28.0515398666257	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTATTTTTGGTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	49296232	49318519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_49296415_49310844_49311232_49316196_49316267_49316759
tx.16471	chr6	+	2323	3	FSM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	29	-1	-4	1	multi-exon	FALSE	canonical	3	46	junction_2	7.5	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATTTTTGGTTTGG	NA	False	NA	NA	False	NA	NA	NA	49296236	49318517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_49296415_49310844_49311232_49316759
tx.16472	chr6	+	1407	7	FSM	ENSMUSG00000047115.16	ENSMUST00000060561.15	2730	7	64	1259	-20	0	multi-exon	FALSE	canonical	3	30	junction_5	5.75663867972351	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGGGTCAGATTTTTC	NA	False	NA	NA	False	NA	NA	NA	49344736	49366214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362306_49362390_49365750
tx.16473	chr6	+	1413	7	NNC	ENSMUSG00000047115.16	novel	2730	7	NA	NA	-27	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	11.0867789130417	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGGTCAGATTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	49344729	49366216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362309_49362390_49365750
tx.16474	chr6	+	2389	20	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-64	5	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_6	56.8725064900417	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	109	False	NA	NA	False	NA	NA	NA	49372473	49446440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
tx.16475	chr6	+	2661	22	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-64	1	at_least_one_novel_splicesite	TRUE	canonical	2	62	junction_6	55.816430581886	40	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	109	False	NA	NA	False	NA	NA	NA	49372473	49446436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
tx.16476	chr6	+	3192	24	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-61	1	at_least_one_novel_splicesite	FALSE	canonical	2	90	junction_1	54.4319696453353	68	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	112	False	NA	NA	False	NA	NA	NA	49372476	49446436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
tx.16477	chr6	+	3283	24	FSM	ENSMUSG00000023403.15	ENSMUST00000024171.14	3237	24	-41	-5	-41	5	multi-exon	FALSE	canonical	2	108	junction_8	52.5929548855327	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	132	False	NA	NA	False	NA	NA	NA	49372496	49446440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
tx.16478	chr6	+	2739	22	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	53.746739604748	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	137	False	NA	NA	False	NA	NA	NA	49372501	49446435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
tx.16479	chr6	+	2191	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-18	-12	-10	1	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	957	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAGTTTTGATTTAG	NA	False	NA	NA	False	NA	NA	NA	50087210	50175579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
tx.1648	chr10	-	1610	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	16	-4	-9	0	multi-exon	FALSE	canonical	3	799	junction_7	118.779206934547	763	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTGCAGTAGCATAAA	6880	False	NA	NA	False	NA	NA	NA	75757432	75732606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
tx.16480	chr6	+	1778	11	NIC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	1	-42	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	329.176563564298	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCAGCCTTCTGCTGGG	NA	False	NA	NA	False	NA	NA	NA	50087221	50175362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
tx.16481	chr6	+	2108	12	FSM	ENSMUSG00000038388.15	ENSMUST00000204545.3	2418	12	-53	363	-16	-11	multi-exon	FALSE	canonical	3	15	junction_1	329.215822601587	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAAGAAATGCGTTCAA	NA	False	NA	NA	False	NA	NA	NA	50087204	50175556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_50087445_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
tx.16482	chr6	-	2151	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	-16	-2	-16	0	multi-exon	FALSE	canonical	3	41	junction_4	6.09998988058258	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGGCTGTTCTATGT	8750	False	NA	NA	False	NA	NA	NA	50238765	50184380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
tx.16483	chr6	-	7014	23	NIC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	-113	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_22	3.69861488480697	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTTTGTCTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	50433294	50270308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
tx.16484	chr6	-	4530	24	NIC	ENSMUSG00000029822.16	novel	4039	22	NA	NA	4	-86	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	3.96439732175821	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGACTCGGATGTCTG	NA	False	NA	NA	False	NA	NA	NA	50433146	50272752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
tx.16485	chr6	-	1036	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	13	2074	13	600	multi-exon	FALSE	canonical	3	4909	junction_2	335	931	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGTTAGGCCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	50543505	50541616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_50542366_50542471_50542649_50543395
tx.16486	chr6	+	2528	4	FSM	ENSMUSG00000029832.17	ENSMUST00000005103.12	2544	4	26	-10	26	10	multi-exon	FALSE	canonical	3	21	junction_2	2.05480466765633	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTCCAACAAGTCC	NA	False	NA	NA	False	NA	NA	NA	51409675	51435758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_51410394_51427946_51428124_51433573_51433658_51434209
tx.16487	chr6	-	3533	10	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	12	0	intron_retention	FALSE	canonical	3	5712	junction_9	757.172925761462	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	NA	False	NA	NA	NA	51446852	51438100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
tx.16488	chr6	-	5881	9	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	6241	junction_5	677.308263920499	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	NA	False	NA	NA	NA	51446825	51438100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
tx.16489	chr6	-	1774	12	FSM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-46	0	12	0	multi-exon	FALSE	canonical	3	874	junction_11	2433.70552759395	374	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	NA	False	NA	NA	NA	51446852	51439739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
tx.1649	chr10	-	1791	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	2	0	2	0	multi-exon	FALSE	canonical	3	68	junction_1	51.1639521538358	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5085	False	NA	NA	False	NA	NA	NA	75768307	75759055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
tx.16490	chr6	-	1732	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-94	0	18	0	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	2675	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	NA	False	NA	NA	NA	51446846	51439739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
tx.16491	chr6	+	1777	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	112	0	-21	0	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	1106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	51447621	51460684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
tx.16492	chr6	+	2564	8	NNC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	26	4	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	142.424917563105	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTTTGTTCGATTTCT	NA	False	NA	NA	False	NA	NA	NA	51500906	51567654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_51501015_51538997_51539045_51546773_51546889_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
tx.16493	chr6	+	2449	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	26	5	26	4	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTTTGTTCGATTTCT	NA	False	NA	NA	False	NA	NA	NA	51500906	51567654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
tx.16494	chr6	-	3439	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTATGATGCTAATA	833	False	NA	NA	False	NA	NA	NA	51989524	51834404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
tx.16495	chr6	-	3450	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	6	6	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	145.545215387598	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGCTAATAATTCAACAG	834	False	NA	NA	False	NA	NA	NA	51989523	51834395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_51836619_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
tx.16496	chr6	-	6757	2	ISM	ENSMUSG00000059182.9	ENSMUST00000205174.2	661	3	7323	-1682	7323	0	3prime_fragment	FALSE	canonical	3	532	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	7092	False	NA	NA	False	NA	NA	NA	51841586	51834401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_51836551_51836978
tx.16497	chr6	-	3377	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	5	0	5	0	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	499	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	833	False	NA	NA	False	NA	NA	NA	51989524	51834401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
tx.16498	chr6	+	2482	3	FSM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	-53	-2021	1	525	multi-exon	FALSE	canonical	3	43	junction_2	88.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTAGATTGATTTT	779	False	NA	NA	False	NA	NA	NA	52079929	52091189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_52080017_52083750_52083877_52088920
tx.16499	chr6	-	2290	2	FSM	ENSMUSG00000029844.10	ENSMUST00000000964.6	2251	2	-34	-5	-34	5	multi-exon	FALSE	canonical	3	16	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCATCTTGTGTATTTGG	NA	False	NA	NA	False	NA	NA	NA	52135331	52132564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_52134070_52134546
tx.1650	chr10	-	2259	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	29	0	2	0	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5085	False	NA	NA	False	NA	NA	NA	75768307	75759055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
tx.16500	chr6	+	419	2	FSM	ENSMUSG00000087658.3	ENSMUST00000159006.2	253	2	-105	-61	-13	-38	multi-exon	FALSE	canonical	3	38	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTAGCAGCTTGGTAA	NA	False	NA	NA	False	NA	NA	NA	52135398	52139061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_52135667_52138910
tx.16501	chr6	-	2048	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	-32	-7	-32	0	multi-exon	FALSE	canonical	2	12	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGACTGCTTTATCCAGA	9922	False	NA	NA	False	NA	NA	NA	52194517	52191470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_52193011_52194009
tx.16502	chr6	-	1872	3	FSM	ENSMUSG00000038227.16	ENSMUST00000114425.3	851	3	2	-1023	2	2	multi-exon	FALSE	canonical	2	7	junction_2	1	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGTGCGGCTCTGCTCT	9735	False	NA	NA	False	NA	NA	NA	52203167	52200077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_52201463_52202507_52202598_52202770
tx.16503	chr6	-	2573	2	FSM	ENSMUSG00000000938.12	ENSMUST00000125581.2	2565	2	-8	0	-8	0	multi-exon	FALSE	canonical	3	17	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTAATTTCACCTCTT	9655	False	NA	NA	False	NA	NA	NA	52211927	52208176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_52209761_52210938
tx.16504	chr6	-	1801	2	FSM	ENSMUSG00000000938.12	ENSMUST00000121043.2	1436	2	360	-725	301	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTAATTTCACCTCTT	2	True	NA	NA	False	NA	NA	NA	52217474	52208176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_52209761_52217257
tx.16505	chr6	-	1784	8	FSM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	39	2	-35	-2	multi-exon	FALSE	canonical	3	833	junction_5	85.7178570684555	803	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGAGCTTTTTGTT	2878	False	NA	NA	False	NA	NA	NA	52617335	52523214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
tx.16506	chr6	+	3261	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	21	3	0	-3	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	962	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACCTTTGTAAATGAT	NA	False	NA	NA	False	NA	NA	NA	52690734	52743762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
tx.16507	chr6	+	2091	6	NNC	ENSMUSG00000108175.2	novel	2065	5	NA	NA	26227	142	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	7.87400787401181	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTTATGTATTTGCAT	NA	False	NA	NA	False	NA	NA	NA	53821954	53845310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_53822096_53828082_53828119_53834180_53834359_53835502_53835591_53835823_53835934_53843772
tx.16508	chr6	+	3355	13	FSM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	149	-1086	109	-3	multi-exon	FALSE	canonical	2	10	junction_6	4.03026742978125	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGAGCGTGTCAAGGG	NA	False	NA	NA	False	NA	NA	NA	54016706	54278792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
tx.16509	chr6	-	4708	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	100	2	100	-2	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGGAGCCTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	54543374	54482876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
tx.1651	chr10	-	1720	9	NNC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	71.7896232055859	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5082	False	NA	NA	False	NA	NA	NA	75768310	75759055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_75759325_75759866_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
tx.16510	chr6	+	6501	13	NIC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	66	-16	combination_of_known_splicesites	FALSE	canonical	1	19	junction_2	73.9239004352148	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCTTCAAAGGGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	54572161	54622808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_54572457_54590076_54590194_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
tx.16511	chr6	+	6654	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	65	20	65	-20	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTTCTTCAAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	54572160	54622804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
tx.16512	chr6	+	5230	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	72	1	-58	-1	multi-exon	TRUE	canonical	3	54	junction_2	0.5	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTGTCGTCTTTACT	NA	False	NA	NA	False	NA	NA	NA	54658680	54680835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_54658917_54665990_54666114_54675964
tx.16513	chr6	+	2434	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-312	3764	-312	-3764	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	823	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATGGTTAAGAATACTG	NA	False	NA	NA	False	NA	NA	NA	54793588	54866721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
tx.16514	chr6	-	3836	8	NIC	ENSMUSG00000038058.15	novel	4064	12	NA	NA	-770	12	intron_retention	FALSE	canonical	3	14	junction_4	3.33197251134017	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAAGTCTGGGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	54921208	54900921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54916373_54920115
tx.16515	chr6	-	4182	12	FSM	ENSMUSG00000038058.15	ENSMUST00000060655.15	4315	12	140	-7	140	7	multi-exon	FALSE	canonical	2	6	junction_10	5.88175495258975	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGGCCAAGTCTGGGG	NA	False	NA	NA	False	NA	NA	NA	54949457	54900926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115_54921941_54924933_54925109_54926416_54926739_54949253
tx.16516	chr6	-	3363	9	ISM	ENSMUSG00000038058.15	ENSMUST00000168172.4	4064	12	26813	4	-1395	-4	3prime_fragment	FALSE	canonical	3	14	junction_4	3.21859829739593	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCACTGTTTCTAATGGC	NA	False	NA	NA	False	NA	NA	NA	54921833	54900937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115
tx.16517	chr6	-	4303	12	NIC	ENSMUSG00000038058.15	novel	4064	12	NA	NA	-40	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	7.53723539206332	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCACTGTTTCTAATGGC	NA	False	NA	NA	False	NA	NA	NA	54941713	54900937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115_54921941_54924933_54925109_54926416_54926739_54941377
tx.16518	chr6	-	876	4	FSM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	17	3067	17	1	multi-exon	FALSE	canonical	3	101	junction_2	27.1947707391615	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCGTGGGTTCTCCTG	2717	False	NA	NA	False	NA	NA	NA	54969918	54962631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_54962987_54963817_54963954_54966396_54966543_54969679
tx.16519	chr6	-	949	4	FSM	ENSMUSG00000002797.10	ENSMUST00000204301.3	431	4	-52	-466	37	182	multi-exon	FALSE	canonical	3	46	junction_2	52.7320269538984	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATGGTACACTGTCC	2737	False	NA	NA	False	NA	NA	NA	54969898	54962450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_54962987_54963817_54963954_54966484_54966543_54969679
tx.1652	chr10	-	2992	7	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	194	junction_2	15.0489940601431	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5085	False	NA	NA	False	NA	NA	NA	75768307	75759055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
tx.16520	chr6	+	2710	18	FSM	ENSMUSG00000038022.12	ENSMUST00000053094.8	4270	18	18	1542	18	365	multi-exon	TRUE	canonical	1	1	junction_8	4.83570915636814	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACTGTGGTTGGTTCA	NA	False	NA	NA	False	NA	NA	NA	55180385	55295665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55253641_55255031_55255096_55256069_55256136_55261730_55261799_55274672_55274737_55277927_55278090_55285139_55285321_55286246_55286320_55295247
tx.16521	chr6	-	486	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	8	0	-1	0	multi-exon	TRUE	canonical	3	1056	junction_2	222.021395365402	230	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATTTGATTTATTATG	NA	False	NA	NA	False	NA	NA	NA	56681669	56678047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
tx.16522	chr6	+	6689	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	-19	0	9	0	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	NA	False	NA	NA	NA	56691892	56738897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
tx.16523	chr6	-	3815	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	1	0	1	0	multi-exon	FALSE	canonical	3	176	junction_3	4.02768199119819	288	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9704	False	NA	NA	False	NA	NA	NA	56774720	56754508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774443
tx.16524	chr6	-	3845	4	NIC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	-192	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	83.0314532103481	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGGTTTTTTGGTT	9968	False	NA	NA	False	NA	NA	NA	56774456	56754510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_56757399_56758785_56758952_56766203_56766686_56774147
tx.16525	chr6	-	3791	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114321.2	3868	4	78	-1	1	0	multi-exon	FALSE	canonical	3	30	junction_3	71.2569684701472	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9704	False	NA	NA	False	NA	NA	NA	56774720	56754508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774467
tx.16526	chr6	+	2975	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	34	0	34	0	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	1289	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	NA	False	NA	NA	NA	56809077	56856343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
tx.16527	chr6	+	3993	3	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	38950	0	21676	0	3prime_fragment	FALSE	canonical	3	825	junction_2	8.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	NA	False	NA	NA	NA	56847993	56856343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_56850498_56852653_56852818_56855018
tx.16528	chr6	-	1697	10	FSM	ENSMUSG00000029780.15	ENSMUST00000152447.9	1067	10	-79	-551	-8	0	multi-exon	FALSE	canonical	3	11	junction_9	88.9986821930458	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCCAGATCATAT	1238	False	NA	NA	False	NA	NA	NA	56900883	56859384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56900656
tx.16529	chr6	-	1654	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	22	0	-20	0	multi-exon	FALSE	canonical	3	204	junction_8	16.5486970786222	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCCAGATCATAT	1226	False	NA	NA	False	NA	NA	NA	56900895	56859384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
tx.1653	chr10	+	658	4	FSM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	303	-22	303	0	multi-exon	FALSE	canonical	3	15821	junction_1	833.259196702256	3163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7249	False	NA	NA	False	NA	NA	NA	75771709	75773581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_75771839_75772071_75772280_75773140_75773289_75773408
tx.16530	chr6	-	5640	7	FSM	ENSMUSG00000037826.6	ENSMUST00000042766.6	5560	7	-79	-1	-37	1	multi-exon	FALSE	canonical	3	10	junction_2	2.3629078131263	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAATTCCAGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	57512490	57483485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721_57502240_57512264
tx.16531	chr6	-	795	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	10	2768	10	-2768	multi-exon	FALSE	canonical	3	182	junction_1	0	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTTTGTCTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	57669053	57666328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_57666864_57668793
tx.16532	chr6	+	3073	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	396	-960	-55	3	multi-exon	TRUE	canonical	3	58	junction_1	7.80924932371864	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGGAGTCTTAATATTT	NA	False	NA	NA	False	NA	NA	NA	57680016	57716427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
tx.16533	chr6	-	2915	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	6	-2	1	2	multi-exon	FALSE	canonical	3	18	junction_1	0.866025403784439	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGATTTTTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	57802138	57729247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
tx.16534	chr6	-	3072	6	FSM	ENSMUSG00000037788.15	ENSMUST00000204878.3	769	6	-4	-2299	0	1	multi-exon	FALSE	canonical	2	6	junction_5	6.01331855134916	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGATTTTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	57802139	57729248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57785520_57785678_57801911
tx.16535	chr6	+	2302	17	NIC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-73	-62	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	52.6289710496985	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGTTCTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	58572886	58669434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_58573003_58573959_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
tx.16536	chr6	+	2591	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	-100	3226	-100	-61	multi-exon	FALSE	canonical	3	51	junction_1	36.1961323900773	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTTCTTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	58573555	58669435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
tx.16537	chr6	+	2143	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	-26	61	-8	-61	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTTCTTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	58617522	58669435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
tx.16538	chr6	+	2231	17	NIC	ENSMUSG00000029802.14	novel	2178	16	NA	NA	-12	-60	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	58.2246457696395	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	58617518	58669436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_58617613_58627445_58627529_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
tx.16539	chr6	+	4824	25	NIC	ENSMUSG00000029804.18	novel	418	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.96743723454787	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	NA	False	NA	NA	NA	58808462	58897383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_58808628_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
tx.1654	chr10	+	4847	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	-21	271	-17	-271	multi-exon	FALSE	canonical	3	112	junction_1	0	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCATTTTTAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	75868466	75878797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_75868584_75874067
tx.16540	chr6	+	5115	25	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	7.34551544973001	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTTGTATTGTAAT	NA	False	NA	NA	False	NA	NA	NA	58808457	58897379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
tx.16541	chr6	+	5250	26	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	8.031537835309	29	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	NA	False	NA	NA	NA	58808461	58897383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
tx.16542	chr6	+	4959	26	NIC	ENSMUSG00000029804.18	novel	418	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.96963767384168	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	NA	False	NA	NA	NA	58808462	58897383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_58808628_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
tx.16543	chr6	-	4322	18	FSM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	14	1450	14	-1450	multi-exon	FALSE	canonical	1	1	junction_14	2.83331637148054	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCATGGTTTCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	59001520	58910524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873_58961061_58964140_58964318_58966728_58966771_58980449_58980492_59001296
tx.16544	chr6	+	2989	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	18	0	18	0	multi-exon	FALSE	canonical	3	130	junction_1	0	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGACTTTTTCTGAA	NA	False	NA	NA	False	NA	NA	NA	59185872	59189018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_59186167_59186323
tx.16545	chr6	+	4924	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	1727	False	NA	NA	False	NA	NA	NA	65019592	65093032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
tx.16546	chr6	+	4940	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	215	13	-12	-13	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	365	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	1942	False	NA	NA	False	NA	NA	NA	65019807	65093032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
tx.16547	chr6	+	5034	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-4	-11	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	86.0431157581836	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	1993	False	NA	NA	False	NA	NA	NA	65019858	65093034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_65020089_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
tx.16548	chr6	+	4886	23	ISM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	515	11	-89	-11	3prime_fragment	FALSE	canonical	3	372	junction_8	28.2983295363075	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	2242	False	NA	NA	False	NA	NA	NA	65020107	65093034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
tx.16549	chr6	+	1629	11	FSM	ENSMUSG00000029913.15	ENSMUST00000031973.13	1488	11	-66	-75	-29	0	multi-exon	FALSE	canonical	2	2	junction_3	49.012753442344	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTACGGCTCTTGACTTT	NA	False	NA	NA	False	NA	NA	NA	65755942	65913357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
tx.1655	chr10	+	4830	2	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-14	-269	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_1	0	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTTTAAATCTTATT	NA	False	NA	NA	False	NA	NA	NA	75868469	75878799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_75868568_75874067
tx.16550	chr6	+	2175	15	FSM	ENSMUSG00000029913.15	ENSMUST00000031976.14	2155	15	-21	1	-21	-1	multi-exon	FALSE	canonical	3	106	junction_5	23.473389188611	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGCTCTTGACTTTCT	NA	False	NA	NA	False	NA	NA	NA	65755950	65913359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
tx.16551	chr6	+	1996	3	FSM	ENSMUSG00000029913.15	ENSMUST00000173538.2	1938	3	-54	-4	-20	4	multi-exon	FALSE	canonical	3	137	junction_2	4.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACTAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	65755951	65809918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_65756178_65771283_65771368_65808232
tx.16552	chr6	+	1688	5	FSM	ENSMUSG00000029910.15	ENSMUST00000125430.2	1680	5	1	-9	1	9	multi-exon	FALSE	canonical	3	769	junction_4	89.7646227642048	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTGTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	66512409	66518013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
tx.16553	chr6	+	1806	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	-43	-38	0	9	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTGTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	66512408	66518013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
tx.16554	chr6	+	1352	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	14	6191	14	9	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	422	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTGTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	66512387	66518013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
tx.16555	chr6	+	4169	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114227.8	1125	5	-22	-3022	12	-55	multi-exon	FALSE	canonical	2	75	junction_1	125.742544510599	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	NA	False	NA	NA	NA	66873392	66998279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_66873500_66891436_66891495_66920808_66920862_66992708_66992828_66994447
tx.16556	chr6	+	4177	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	19	52	-7	-52	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCATTGACTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	66873399	66998282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
tx.16557	chr6	+	4124	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	-7	-3369	-7	-52	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCATTGACTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	66873399	66998282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
tx.16558	chr6	+	4110	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	-22	-2212	-5	-52	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCATTGACTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	66873401	66998282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
tx.16559	chr6	-	1219	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	0	4	0	-4	multi-exon	FALSE	canonical	3	118	junction_1	3.77123616632825	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATTTCTCAACGTG	NA	False	NA	NA	False	NA	NA	NA	67014390	67012083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
tx.1656	chr10	+	5166	2	NIC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-10	-271	intron_retention	FALSE	canonical	3	22	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCATTTTTAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	75868473	75878797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_75868910_75874067
tx.16560	chr6	+	1757	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	373	13344	-8	81	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	785	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGGTTTTAATACCTG	5858	False	NA	NA	False	NA	NA	NA	67243980	67261376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
tx.16561	chr6	+	1968	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	14	-315	-8	310	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	596	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGGCTCATGCATGG	5858	False	NA	NA	False	NA	NA	NA	67243980	67261605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
tx.16562	chr6	+	1707	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-14	-76	-8	76	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	1285	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATAATACTGGTTTTAAT	5858	False	NA	NA	False	NA	NA	NA	67243980	67261371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
tx.16563	chr6	+	1704	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-13	-355	-8	91	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	970	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATACCTGCTTTTCATTT	5858	False	NA	NA	False	NA	NA	NA	67243980	67261386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
tx.16564	chr6	+	4513	17	FSM	ENSMUSG00000031668.15	ENSMUST00000034093.15	4513	17	-5	5	-5	-5	multi-exon	FALSE	canonical	3	52	junction_8	9.41408519188137	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGTTGACTCTTATT	NA	False	NA	NA	False	NA	NA	NA	70821493	70882224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858467_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
tx.16565	chr6	+	1666	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	21	0	-3	0	multi-exon	FALSE	canonical	3	170	junction_2	14.5	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTGTGTCAGTGCT	NA	False	NA	NA	False	NA	NA	NA	71248681	71262303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_71248825_71259134_71259302_71260947
tx.16566	chr6	+	2894	2	FSM	ENSMUSG00000073018.7	ENSMUST00000114185.4	2874	2	-20	0	-20	0	multi-exon	FALSE	canonical	3	49	junction_1	0	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGTGATGTGATT	NA	False	NA	NA	False	NA	NA	NA	71270728	71279864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_71270843_71277084
tx.16567	chr6	-	4705	2	ISM	ENSMUSG00000002222.15	ENSMUST00000144081.8	3086	3	1503	-1828	1408	-5	3prime_fragment	FALSE	canonical	3	177	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	1570	False	NA	NA	False	NA	NA	NA	71371763	71365622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_71370173_71371608
tx.16568	chr6	-	4964	10	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	65	-11	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	48.3600181764305	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTTTTTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	71417556	71365628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
tx.16569	chr6	-	6095	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	65	5	65	-5	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	NA	False	NA	NA	False	NA	NA	NA	71417556	71365622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
tx.1657	chr10	-	2434	15	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4506	-672	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	4.04817923294422	12	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTTTTTTAAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	75951301	75893999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75951237
tx.16570	chr6	+	3286	4	FSM	ENSMUSG00000052656.13	ENSMUST00000064637.11	3264	4	-23	1	-23	-1	multi-exon	FALSE	canonical	3	15	junction_3	2.16024689946929	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTAGGTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	71470854	71487864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_71471873_71473814_71473955_71482717_71482834_71485852
tx.16571	chr6	+	2558	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	95	1	0	-1	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	375	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATATTATGCCTTT	NA	False	NA	NA	False	NA	NA	NA	71520875	71558562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
tx.16572	chr6	+	2512	6	NIC	ENSMUSG00000053119.12	novel	347	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	151.398282685108	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATATTATGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	71521334	71558563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_71521430_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
tx.16573	chr6	+	2937	2	FSM	ENSMUSG00000053119.12	ENSMUST00000128382.2	436	2	-741	-1760	-741	0	multi-exon	FALSE	canonical	3	336	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATATTATGCCTTTG	8595	False	NA	NA	False	NA	NA	NA	71553831	71558563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_71554830_71556624
tx.16574	chr6	-	4715	25	ISM	ENSMUSG00000053470.14	ENSMUST00000167220.4	4853	26	296	67	296	-4	3prime_fragment	FALSE	canonical	3	176	junction_18	108.866819440085	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	71609374	71566024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039
tx.16575	chr6	-	4781	26	FSM	ENSMUSG00000053470.14	ENSMUST00000167220.4	4853	26	8	64	8	-1	multi-exon	TRUE	canonical	3	176	junction_18	109.170809285266	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGCTGTTCTTTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	71609662	71566021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480
tx.16576	chr6	-	4791	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-44	69	41	-4	multi-exon	FALSE	canonical	3	176	junction_18	110.285703472991	301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	71609933	71566024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
tx.16577	chr6	+	3653	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	271	0	-38	0	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTAATGTTGGGCTAAT	1546	False	NA	NA	False	NA	NA	NA	71684815	71787694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
tx.16578	chr6	-	786	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	27	2908	-20	258	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	424	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTAATGGCTTTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	71800767	71792888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
tx.16579	chr6	+	2732	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	429.104185911608	1142	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	71808324	71852241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
tx.1658	chr10	-	2037	11	FSM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	-20	-1	0	1	multi-exon	FALSE	canonical	2	10	junction_3	2.63818119165458	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTGTTCTGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	76073691	76043059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072656_76073583
tx.16580	chr6	+	2697	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	457.116069058741	678	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	71808326	71852241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
tx.16581	chr6	+	2699	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	498.237176476895	165	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	71808321	71852241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829749_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
tx.16582	chr6	-	2592	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	1044	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3039	False	NA	NA	False	NA	NA	NA	71885743	71857621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
tx.16583	chr6	+	6105	34	FSM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-4	3115	4	-3115	multi-exon	FALSE	canonical	3	275	junction_3	38.128991835157	475	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	71886040	71956344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
tx.16584	chr6	+	2246	7	FSM	ENSMUSG00000056091.13	ENSMUST00000069994.11	2258	7	7	5	7	-5	multi-exon	FALSE	canonical	3	38	junction_5	8.15304987242334	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTTGAGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	72074582	72131550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
tx.16585	chr6	-	3817	14	NNC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	1	1783	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	175.932746698694	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGAGATGGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	72322166	72293877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_72293940_72294148_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
tx.16586	chr6	-	2152	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	1	91	1	-91	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	1003	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTTGTTTCATATA	NA	False	NA	NA	False	NA	NA	NA	72322166	72295751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
tx.16587	chr6	+	4935	3	ISM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	-13	-1	4	1	intron_retention	FALSE	canonical	3	33	junction_1	8	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGCCAAAAGTTGTGA	8313	False	NA	NA	False	NA	NA	NA	72324303	72330132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_72324499_72324575_72324695_72325511
tx.16588	chr6	+	4618	4	FSM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	-13	0	4	0	multi-exon	FALSE	canonical	3	33	junction_1	6.54896090146283	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGCCAAAAGTTGTG	8313	False	NA	NA	False	NA	NA	NA	72324303	72330131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_72324499_72324575_72324695_72325511_72325664_72325979
tx.16589	chr6	+	5020	2	FSM	ENSMUSG00000058706.6	ENSMUST00000205472.2	1033	2	-4	-3983	-4	10	multi-exon	FALSE	canonical	3	49	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTGTGAAATCACTTG	8314	False	NA	NA	False	NA	NA	NA	72324304	72330141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_72324695_72325511
tx.1659	chr10	-	3877	18	ISM	ENSMUSG00000001151.11	ENSMUST00000220395.2	6762	30	27539	1	-20540	-1	3prime_fragment	FALSE	canonical	3	133	junction_9	33.244194539622	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	NA	False	NA	NA	NA	76225207	76187097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685
tx.16590	chr6	+	1538	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	4	4	4	-4	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCAGTGTGTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	72332433	72336741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
tx.16591	chr6	+	1459	7	NIC	ENSMUSG00000055912.9	novel	1546	8	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	41.217579852399	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCAGTGTGTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	72332464	72336741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_72332528_72333113_72333296_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
tx.16592	chr6	-	1394	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	40	0	1	0	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	582	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8448	False	NA	NA	False	NA	NA	NA	72339375	72336696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
tx.16593	chr6	-	741	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	74	5	74	0	multi-exon	FALSE	canonical	3	289	junction_1	0.5	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACGAGGCGCTTTACTC	8167	False	NA	NA	False	NA	NA	NA	72367612	72362210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72362637_72365244_72365404_72367456
tx.16594	chr6	+	3098	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	5	-174	5	174	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCTTTGAAGAAAGGAAG	1286	False	NA	NA	False	NA	NA	NA	72391295	72407869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
tx.16595	chr6	-	2805	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	2	-3	0	3	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	994	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	72416539	72409778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
tx.16596	chr6	-	3390	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	0	-3	0	3	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	378	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	72416539	72409778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
tx.16597	chr6	+	1193	10	FSM	ENSMUSG00000056737.15	ENSMUST00000071044.13	1247	10	48	6	48	-4	multi-exon	TRUE	canonical	3	14	junction_1	22.7389913671443	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCTTCCTGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	72521421	72539960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_72521450_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
tx.16598	chr6	+	1245	10	FSM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	148	7	-11	-5	multi-exon	FALSE	canonical	3	46	junction_1	14.6439217576592	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTCTCTTCCTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	72526403	72539959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
tx.16599	chr6	-	2202	12	FSM	ENSMUSG00000056698.12	ENSMUST00000070990.8	2122	12	-69	-11	1	-1	multi-exon	FALSE	canonical	3	36	junction_11	7.42677755109095	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTTCCAAGATGAAGT	NA	False	NA	NA	False	NA	NA	NA	72575395	72542905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
tx.166	chr1	+	509	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	64	292	-62	3	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTAGTCTTATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	36730628	36732470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
tx.1660	chr10	-	9300	41	NIC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	19	-1	intron_retention	TRUE	canonical	3	73	junction_29	43.2194328398696	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	NA	False	NA	NA	NA	76278601	76187097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
tx.16600	chr6	-	2822	11	FSM	ENSMUSG00000056698.12	ENSMUST00000141833.8	2509	11	-14	-299	4	299	multi-exon	FALSE	canonical	3	36	junction_10	7.7	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCCTGGTGGTTGGACT	NA	False	NA	NA	False	NA	NA	NA	72575392	72544233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
tx.16601	chr6	+	1963	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	127	937	-26	46	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	540	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTTGTTAAGTCAAGA	NA	False	NA	NA	False	NA	NA	NA	72575584	72584471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
tx.16602	chr6	-	4770	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	250	-7	250	7	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	647	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACATTACATGTATTAA	4669	False	NA	NA	False	NA	NA	NA	72593733	72585407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
tx.16603	chr6	-	4477	3	ISM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	770	-7	770	7	3prime_fragment	FALSE	canonical	3	270	junction_1	2	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACATTACATGTATTAA	5189	False	NA	NA	False	NA	NA	NA	72593213	72585407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_72589094_72591054_72591139_72592506
tx.16604	chr6	-	3018	12	FSM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	27	-3	27	3	multi-exon	FALSE	canonical	3	205	junction_8	63.9987086646582	474	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCTGGATGTTTCTTTA	4850	False	NA	NA	False	NA	NA	NA	72766210	72603357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
tx.16605	chr6	-	3065	13	FSM	ENSMUSG00000055799.14	ENSMUST00000114053.9	1888	13	-280	-897	22	3	multi-exon	FALSE	canonical	3	158	junction_8	90.8812946772999	306	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCTGGATGTTTCTTTA	4845	False	NA	NA	False	NA	NA	NA	72766215	72603357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
tx.16606	chr6	-	1855	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	1	1395	1	60	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	1290	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	8466	False	NA	NA	False	NA	NA	NA	72876961	72819491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
tx.16607	chr6	-	476	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	89	5	0	1	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	3748	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	NA	False	NA	NA	NA	72935382	72934334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_72934636_72934895_72935008_72935319
tx.16608	chr6	+	1250	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	265	4	-5	3	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	801	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGAAGACTTTTT	2580	False	NA	NA	False	NA	NA	NA	73225629	73253890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
tx.16609	chr6	+	809	3	Intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	14.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAACATTCTTTCATTAT	NA	False	NA	NA	False	NA	NA	NA	78818578	78847534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_+_78818671_78833904_78833986_78846898
tx.16610	chr6	+	3284	17	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-4	-167	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	11.5805602196094	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACTGTTCTCTGGCCTTG	NA	False	NA	NA	False	NA	NA	NA	81900645	81936070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
tx.16611	chr6	+	3235	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-3	960	-3	-301	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATCCTGTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	81900646	81935936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
tx.16612	chr6	-	1386	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	12	3602	12	521	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTGCATGTCAGTT	NA	False	NA	NA	False	NA	NA	NA	81942927	81938433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
tx.16613	chr6	+	1764	3	FSM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	8	1	8	-1	multi-exon	FALSE	canonical	3	34	junction_1	1.5	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTCGTGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	82018611	82070079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_82018883_82048035_82048224_82068774
tx.16614	chr6	-	1482	4	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	16631	-16	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_3	429.604727886254	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGAGACTCTCCAGTCT	NA	False	NA	NA	False	NA	NA	NA	82665715	82623697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82665680
tx.16615	chr6	-	1583	3	ISM	ENSMUSG00000030042.16	ENSMUST00000141138.8	890	4	-348	-34	2	34	intron_retention	FALSE	canonical	3	893	junction_1	84.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGTGTTGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	82629849	82624262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_82625018_82628417_82628460_82629063
tx.16616	chr6	-	1702	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	55	12	-4	-12	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTCTCCAGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	82629855	82623693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
tx.16617	chr6	-	1636	4	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-2	-12	combination_of_known_junctions	FALSE	canonical	3	146	junction_3	397.998604129322	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTCTCCAGTCTTTCT	6107	False	NA	NA	False	NA	NA	NA	82682348	82623693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163
tx.16618	chr6	-	4344	12	ISM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	31474	-2	-16671	2	3prime_fragment	FALSE	canonical	3	450	junction_11	45.485807431395	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGTGATTGGATCT	6691	False	NA	NA	False	NA	NA	NA	82719961	82702003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783
tx.16619	chr6	-	5511	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	-2	4	-2	-4	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	1038	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTCAGTGTGTGATT	9396	False	NA	NA	False	NA	NA	NA	82751437	82702009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
tx.1662	chr10	-	4251	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	269	2	18	-2	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGTCTCTCGTGATTC	NA	False	NA	NA	False	NA	NA	NA	76304679	76295402	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
tx.16620	chr6	-	4522	14	ISM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	30431	5	-17714	-5	3prime_fragment	FALSE	canonical	3	450	junction_11	51.4550415583852	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTCAGTGTGTGAT	9841	False	NA	NA	False	NA	NA	NA	82721004	82702010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925
tx.16621	chr6	-	4071	14	FSM	ENSMUSG00000000627.16	ENSMUST00000000641.15	4086	14	15	0	15	0	multi-exon	FALSE	canonical	3	23	junction_9	5.49986551745215	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGCGTGGTTATTGT	NA	False	NA	NA	False	NA	NA	NA	82916735	82888865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896450_82896543_82896664_82907878_82907973_82912567_82912667_82912875_82912936_82914041_82914194_82916441
tx.16622	chr6	+	1925	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	19	1	19	-1	multi-exon	FALSE	canonical	0	0	junction_8	176.542723818721	558	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	NA	False	NA	NA	NA	82923901	83007163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
tx.16623	chr6	-	1796	5	FSM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	11	0	8	0	multi-exon	FALSE	canonical	3	30	junction_1	5.31507290636732	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCTGCGTATGAATGAG	NA	False	NA	NA	False	NA	NA	NA	83010441	83007914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010048_83010351
tx.16624	chr6	+	2856	14	FSM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	3	1239	3	656	multi-exon	FALSE	canonical	2	3	junction_1	2.5903781908435	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGGACTGATGCAGCG	2232	False	NA	NA	False	NA	NA	NA	83011156	83028304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015591_83024968_83025189_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
tx.16625	chr6	-	1616	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	105	4	-24	-4	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	400	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	2002	False	NA	NA	False	NA	NA	NA	83031447	83028250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
tx.16626	chr6	+	1439	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	204	126	-4	0	multi-exon	FALSE	canonical	3	960	junction_10	78.8006166859286	770	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5417	False	NA	NA	False	NA	NA	NA	83031705	83034663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
tx.16627	chr6	+	1371	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	317.12207936872	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5414	False	NA	NA	False	NA	NA	NA	83031702	83034661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_83031814_83031891_83032030_83032109_83032192_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
tx.16628	chr6	+	1678	11	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	-2	0	intron_retention	TRUE	canonical	3	960	junction_9	76.9269783626005	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5404	False	NA	NA	False	NA	NA	NA	83031692	83034663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
tx.16629	chr6	-	2306	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-801	-269	-801	2	multi-exon	FALSE	canonical	3	90	junction_1	3	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTCTCCAGTTGTCTC	6375	False	NA	NA	False	NA	NA	NA	83048075	83045302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83045956_83046034_83046273_83046660
tx.1663	chr10	+	6246	29	NNC	ENSMUSG00000001150.8	novel	578	5	NA	NA	-5880	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	64.111699002441	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGCCTTAGTTTTATG	5725	False	NA	NA	False	NA	NA	NA	76298880	76351690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_76298989_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
tx.16630	chr6	+	1920	12	NNC	ENSMUSG00000069678.11	novel	918	9	NA	NA	-6498	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	80.471646872754	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATCTTCCTTCTTAC	9072	False	NA	NA	False	NA	NA	NA	83048351	83057836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_83048437_83049218_83049526_83054554_83055220_83055381_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
tx.16631	chr6	+	907	9	FSM	ENSMUSG00000069678.11	ENSMUST00000165164.9	918	9	11	0	11	0	multi-exon	FALSE	canonical	3	163	junction_1	14.5408906192159	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATCTTCCTTCTTAC	117	False	NA	NA	False	NA	NA	NA	83055337	83057836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
tx.16632	chr6	+	643	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	52	0	-28	0	multi-exon	FALSE	canonical	3	747	junction_2	17.5	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7435	False	NA	NA	False	NA	NA	NA	83086072	83086920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83086185_83086294_83086408_83086502
tx.16633	chr6	+	2775	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	6	-1	6	1	multi-exon	FALSE	canonical	3	308	junction_2	15.1070255914995	571	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCTTGCTTTAGACAG	5179	False	NA	NA	False	NA	NA	NA	83092482	83095880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
tx.16634	chr6	+	3238	2	FSM	ENSMUSG00000030036.9	ENSMUST00000145403.3	684	2	-1009	-1545	11	-2	multi-exon	FALSE	canonical	3	345	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCCCTTGCTTTAGA	5184	False	NA	NA	False	NA	NA	NA	83092487	83095877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83093806_83093957
tx.16635	chr6	-	1781	4	FSM	ENSMUSG00000030035.15	ENSMUST00000131939.6	1902	4	121	0	-32	0	multi-exon	FALSE	canonical	3	121	junction_3	19.1369334592098	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	83098419	83096025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83096702_83096848_83097026_83097165_83097858_83098183
tx.16636	chr6	-	1297	5	FSM	ENSMUSG00000030035.15	ENSMUST00000032111.11	1419	5	121	1	-32	0	multi-exon	FALSE	canonical	3	121	junction_4	18.4390889145858	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	83098419	83096025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097858_83098183
tx.16637	chr6	-	1265	5	FSM	ENSMUSG00000030034.13	ENSMUST00000032109.5	1038	5	-165	-62	-165	-1	multi-exon	FALSE	canonical	3	116	junction_3	6.41774882649672	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTATCGAATTGCTGG	NA	False	NA	NA	False	NA	NA	NA	83102175	83098746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83099346_83100974_83101145_83101287_83101407_83101565_83101759_83101991
tx.16638	chr6	+	2282	12	NIC	ENSMUSG00000034930.17	novel	653	6	NA	NA	-172	-3	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	15.2196045821291	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	1478	False	NA	NA	False	NA	NA	NA	83119200	83129557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_83119543_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
tx.16639	chr6	+	2024	11	ISM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	8740	0	-1985	0	3prime_fragment	FALSE	canonical	3	54	junction_8	8.87693640846886	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	1088	False	NA	NA	False	NA	NA	NA	83122830	83129560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
tx.1664	chr10	-	347	2	ISM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	271	8543	20	-745	5prime_fragment	FALSE	canonical	3	38	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCTTCTCGTACAGCT	NA	False	NA	NA	False	NA	NA	NA	76304677	76303943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_76304221_76304607
tx.16640	chr6	+	4107	28	FSM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	12	-1	12	0	multi-exon	TRUE	canonical	3	372	junction_1	39.6793042772762	658	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	505	False	NA	NA	False	NA	NA	NA	83142913	83177099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
tx.16641	chr6	+	4160	28	NIC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	89.8211910680514	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	526	False	NA	NA	False	NA	NA	NA	83142934	83177099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_83143051_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
tx.16642	chr6	+	3143	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-5	-34	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_11	174.270144698779	39	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAATAAAGCCTCAATCG	5721	False	NA	NA	False	NA	NA	NA	83254369	83281892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83276591_83276676_83277452_83277521_83280307
tx.16643	chr6	+	3092	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40010	4	-8	-4	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	455	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACGCCATGTCTAATAA	5718	False	NA	NA	False	NA	NA	NA	83254366	83281922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
tx.16644	chr6	+	2198	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-7	685	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	75	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCTGAGTGGATT	5719	False	NA	NA	False	NA	NA	NA	83254367	83281143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
tx.16645	chr6	+	2394	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-33	684	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	141.343845443047	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGCTCTGAGTGGAT	5693	False	NA	NA	False	NA	NA	NA	83254341	83281142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
tx.16646	chr6	-	1893	7	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	4059	15	-1142	-15	3prime_fragment	FALSE	canonical	3	2400	junction_5	112.182019751632	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCGTTTCTGAAATGCTC	NA	False	NA	NA	False	NA	NA	NA	83290529	83282687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343
tx.16647	chr6	-	2059	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	11	15	11	-15	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	2765	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCGTTTCTGAAATGCTC	NA	False	NA	NA	False	NA	NA	NA	83294577	83282687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
tx.16648	chr6	+	4308	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	24	80	4	-79	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	577	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGAAGTGTGTTAAC	NA	False	NA	NA	False	NA	NA	NA	83303021	83320678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
tx.16649	chr6	+	550	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	22	1740	22	0	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGCCATGCTTCAGG	371	False	NA	NA	False	NA	NA	NA	83326449	83335378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
tx.1665	chr10	+	6450	29	FSM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	-23	0	-23	0	multi-exon	FALSE	canonical	3	127	junction_5	51.5606810130608	224	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	NA	False	NA	NA	NA	76304737	76351691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
tx.16650	chr6	-	10909	11	FSM	ENSMUSG00000034832.16	ENSMUST00000089622.11	10904	11	-5	0	-2	0	multi-exon	FALSE	canonical	2	3	junction_8	2.99332590941915	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTAAGCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	83418662	83339354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83346808_83347364_83347702_83350175_83350314_83350764_83350855_83352731_83352883_83353747_83353957_83356853_83356948_83362966_83363058_83379648_83381807_83418198_83418256_83418531
tx.16651	chr6	-	1048	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	59	0	-3	0	multi-exon	FALSE	canonical	3	197	junction_5	13.5369863706809	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	83483892	83457198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
tx.16652	chr6	-	941	6	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	77.3356321497406	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	83483898	83457198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83483729
tx.16653	chr6	-	2100	10	FSM	ENSMUSG00000006906.11	ENSMUST00000068054.9	2364	10	271	-7	-19	0	multi-exon	FALSE	canonical	3	22	junction_4	7.14920352984241	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGAGTGATTTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	83549440	83520198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
tx.16654	chr6	-	1268	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5441	2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	37.4799946638203	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGGCGGACTTTGCTT	2725	False	NA	NA	False	NA	NA	NA	83675084	83669785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_83670449_83671329_83671456_83672566_83672825_83673961_83674051_83674952
tx.16655	chr6	+	1280	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-38	0	-38	0	multi-exon	FALSE	canonical	3	115	junction_1	5	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTGTCCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	83688207	83715295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83688526_83710080_83710269_83714521
tx.16656	chr6	-	2983	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	2	-1	2	1	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	568	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGTAGTGTGTGACCA	9714	False	NA	NA	False	NA	NA	NA	83752793	83745865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
tx.16657	chr6	-	3651	5	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	3	1	intron_retention	FALSE	canonical	3	526	junction_1	52.0696648731293	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGTAGTGTGTGACCA	9738	False	NA	NA	False	NA	NA	NA	83752769	83745865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_83748286_83748428_83749292_83750691_83750846_83751999_83752080_83752635
tx.16658	chr6	+	1366	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	-42	-1	4	1	multi-exon	FALSE	canonical	3	32	junction_1	71.6054001687955	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9262	False	NA	NA	False	NA	NA	NA	83771967	83779537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
tx.16659	chr6	+	1285	10	FSM	ENSMUSG00000034744.14	ENSMUST00000146117.8	1049	10	-14	-222	-14	0	multi-exon	FALSE	canonical	3	35	junction_1	70.680816193489	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9470	False	NA	NA	False	NA	NA	NA	83772175	83779538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83772357_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
tx.1666	chr10	+	4328	23	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	11942	0	-249	0	3prime_fragment	FALSE	canonical	3	162	junction_1	37.3435303124698	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	NA	False	NA	NA	NA	76316702	76351691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
tx.16660	chr6	+	1199	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	206	0	-20	0	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9464	False	NA	NA	False	NA	NA	NA	83772169	83779538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
tx.16661	chr6	-	3321	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	4	657	4	-657	multi-exon	FALSE	canonical	3	74	junction_4	4.71036092035419	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCAGGTTATTGTTA	NA	False	NA	NA	False	NA	NA	NA	83808719	83783039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
tx.16662	chr6	+	6444	28	FSM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	-23	-222	2	0	multi-exon	FALSE	canonical	3	109	junction_24	71.435679050644	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	83891350	83963853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
tx.16663	chr6	+	6342	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	162	junction_24	66.2109436064344	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	83891350	83963853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
tx.16664	chr6	+	6215	27	ISM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	14379	-222	-84	0	3prime_fragment	FALSE	canonical	3	109	junction_23	72.7542369493546	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	83905752	83963853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
tx.16665	chr6	-	5425	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	14	0	3	0	multi-exon	TRUE	canonical	3	201	junction_13	26.9684454901315	390	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	85046481	84595468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
tx.16666	chr6	-	5259	21	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_20	52.9942213830904	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	85046481	84595468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_85046277
tx.16667	chr6	-	1233	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	-4	1	-4	-1	multi-exon	FALSE	canonical	3	345	junction_2	5	227	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGTGTGCGTTGTCCTT	7978	False	NA	NA	False	NA	NA	NA	85114752	85110660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_85111271_85113804_85114096_85114420
tx.16668	chr6	-	4247	2	ISM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	35102	0	2175	0	3prime_fragment	FALSE	canonical	3	103	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTTTGTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	85316444	85311943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_85314209_85314462
tx.16669	chr6	-	4065	3	ISM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	32678	-1	-319	1	3prime_fragment	FALSE	canonical	3	103	junction_1	16.5	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	85318938	85311947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_85314209_85314462_85314653_85317324
tx.1667	chr10	+	3122	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	1	1544	1	702	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	271	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTCCTGAGACAT	NA	False	NA	NA	False	NA	NA	NA	76367441	76389769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
tx.16670	chr6	-	4879	4	ISM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	26446	-1	-6551	1	3prime_fragment	FALSE	canonical	3	80	junction_3	22.9830855679176	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	8313	False	NA	NA	False	NA	NA	NA	85325170	85311947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761
tx.16671	chr6	-	4122	5	FSM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	-91	4	-21	1	multi-exon	FALSE	canonical	3	27	junction_2	41.9344726925235	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	85351637	85311947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536_85325974_85351079
tx.16672	chr6	-	5851	6	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	-31	1	intron_retention	FALSE	canonical	3	18	junction_3	44.0817422523203	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	85351647	85311947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_85314209_85314462_85314653_85317324_85319044_85324761_85325438_85325536_85325974_85351079
tx.16673	chr6	-	6157	6	FSM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	-38	0	-38	0	multi-exon	FALSE	canonical	3	80	junction_3	21.2188595357997	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTTGTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	85351654	85311948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079
tx.16674	chr6	+	2484	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	-4	6	-4	-6	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	756	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTGCAACAATGCCTT	NA	False	NA	NA	False	NA	NA	NA	85408966	85423411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
tx.16675	chr6	-	1002	5	FSM	ENSMUSG00000030008.10	ENSMUST00000126805.8	953	5	79	-128	54	0	multi-exon	FALSE	canonical	3	68	junction_4	38.4991883031318	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	85428873	85423791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
tx.16676	chr6	-	1097	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	-59	0	-59	0	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	85428324	85423791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
tx.16677	chr6	+	1846	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	507	88	2	-88	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	6311	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTTTTTCATAAA	5117	False	NA	NA	False	NA	NA	NA	85429002	85445369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
tx.16678	chr6	+	6875	16	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	2290	9	NA	NA	-18274	2	multi-exon	FALSE	canonical	3	3	junction_11	13.4669966956259	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCTTAGTCCCTGTGG	NA	False	NA	NA	False	NA	NA	NA	85598170	85781041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr6_+_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85751381_85751472_85755981_85757136_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
tx.16679	chr6	+	4371	14	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	2290	9	NA	NA	-11189	0	multi-exon	FALSE	canonical	3	3	junction_9	13.3350097565431	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGCTTAGTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	85605255	85781039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr6_+_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85751381_85751472_85755981_85757136_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
tx.1668	chr10	-	3959	33	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	135	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	14.0270038118445	67	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCCTCTTTATCTACA	8577	False	NA	NA	False	NA	NA	NA	76561867	76544625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556864_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
tx.16680	chr6	-	3106	4	FSM	ENSMUSG00000068299.12	ENSMUST00000095757.4	3019	4	-87	0	-87	0	multi-exon	FALSE	canonical	2	6	junction_3	4.49691252107735	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGGGTGGATCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	85881953	85876032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_85878596_85878934_85879080_85879173_85879312_85881693
tx.16681	chr6	+	2120	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	-17	0	-8	0	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTTATTATG	3401	False	NA	NA	False	NA	NA	NA	85892711	85907264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
tx.16682	chr6	+	2907	5	FSM	ENSMUSG00000054226.14	ENSMUST00000202803.4	716	5	-4	-2187	-4	0	multi-exon	FALSE	canonical	3	153	junction_1	23.847169643377	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTTATTATG	3405	False	NA	NA	False	NA	NA	NA	85892715	85907264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789
tx.16683	chr6	-	6533	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	97.2756043922449	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGTGTACTATCTTGT	7324	False	NA	NA	False	NA	NA	NA	85938645	85919252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85932383_85935565_85935698_85936197_85936274_85938419
tx.16684	chr6	-	6427	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	4	4	4	-4	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	303	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAGGTGTACTATCTTG	7324	False	NA	NA	False	NA	NA	NA	85938645	85919253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
tx.16685	chr6	+	4518	6	FSM	ENSMUSG00000029999.15	ENSMUST00000032066.13	4527	6	2	7	2	-7	multi-exon	FALSE	canonical	2	3	junction_4	2.89827534923789	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAAATCTCAAGACTGAA	NA	False	NA	NA	False	NA	NA	NA	86172206	86252694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_86172528_86206412_86206467_86240140_86240259_86246911_86247062_86248361_86248472_86248929
tx.16686	chr6	+	575	2	ISM	ENSMUSG00000057497.9	ENSMUST00000204893.2	448	3	-49	1759	29	20	5prime_fragment	FALSE	canonical	3	1864	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATTTGGGGCTGTAGA	8646	False	NA	NA	False	NA	NA	NA	86342656	86344021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_86342802_86343591
tx.16687	chr6	+	1609	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	34	0	34	0	multi-exon	FALSE	canonical	3	1740	junction_2	62	1320	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	8651	False	NA	NA	False	NA	NA	NA	86342661	86347040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_86342802_86343591_86343733_86345712
tx.16688	chr6	+	435	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	196	424	-42	-3	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	405	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCGTTTCTGCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	86348481	86355886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
tx.16689	chr6	-	3660	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	16	619	3	-619	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	371	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTCTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	86374120	86363606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
tx.1669	chr10	-	3516	31	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	2690	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	14.0791413879619	9	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCTCTTTATCTAC	NA	False	NA	NA	False	NA	NA	NA	76559312	76544626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556864_76557096_76557118_76557236_76557366_76557649_76557810_76559209
tx.16690	chr6	+	3761	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	-22	-609	0	-433	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGGGGTCTTCTTG	9753	False	NA	NA	False	NA	NA	NA	86381272	86409776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
tx.16691	chr6	+	4630	12	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	-17	0	intron_retention	FALSE	canonical	3	32	junction_5	54.2339590482715	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9727	False	NA	NA	False	NA	NA	NA	86381246	86409162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
tx.16692	chr6	+	3791	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	73	613	1	-435	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTGGGGTCTTCT	9754	False	NA	NA	False	NA	NA	NA	86381273	86409774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
tx.16693	chr6	+	5055	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-433	intron_retention	FALSE	canonical	3	32	junction_6	51.9548415025545	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGGGGTCTTCTTG	9748	False	NA	NA	False	NA	NA	NA	86381267	86409776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
tx.16694	chr6	+	2109	4	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	26	-1	intron_retention	FALSE	canonical	3	38	junction_1	36.6454484061648	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTGTATTTTTAAATT	NA	False	NA	NA	False	NA	NA	NA	86503278	86541429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_86504957_86509136_86509290_86540413_86540520_86541257
tx.16695	chr6	+	2065	4	FSM	ENSMUSG00000097048.8	ENSMUST00000180896.8	2099	4	34	0	34	0	multi-exon	FALSE	canonical	3	81	junction_1	16.5126214353344	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATTTTTAAATTTA	NA	False	NA	NA	False	NA	NA	NA	86503286	86541431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_86504957_86509174_86509290_86540413_86540520_86541257
tx.16696	chr6	-	4664	6	FSM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	0	2	0	-2	multi-exon	FALSE	canonical	3	13	junction_5	4.44522215417857	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTCTTCCTGTGTCCC	4023	False	NA	NA	False	NA	NA	NA	86646143	86624025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86645917
tx.16697	chr6	-	4986	11	Fusion	ENSMUSG00000001158.14_ENSMUSG00000001156.10	novel	912	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	6	junction_5	964.534607984597	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTCTTCCTGTGTCCC	7651	False	NA	NA	False	NA	NA	NA	86661499	86624025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86652464_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
tx.16698	chr6	-	816	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	5	64	0	-64	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	443	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATTTGACAAATATCT	7651	False	NA	NA	False	NA	NA	NA	86661499	86652196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
tx.16699	chr6	-	2920	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	27	2	27	-2	multi-exon	FALSE	canonical	3	303	junction_7	38.1766371135774	486	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCCTGTTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	86710338	86668751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
tx.1670	chr10	-	2167	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-153	-1	-54	1	multi-exon	FALSE	canonical	3	60	junction_5	18.4407760742931	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGACTTCTCTCTGC	1083	False	NA	NA	False	NA	NA	NA	76797775	76597689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
tx.16700	chr6	-	1981	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	21	0	1	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATTCTTTCTCTGAT	4627	False	NA	NA	False	NA	NA	NA	86770545	86713822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
tx.16701	chr6	+	10038	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_16	7.67885692990825	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTAGTTGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	86826460	86980205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86972821
tx.16702	chr6	+	900	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	50	0	-3	0	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	656	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTGCTTCCTCTCACG	NA	False	NA	NA	False	NA	NA	NA	86986867	87005441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
tx.16703	chr6	+	6242	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	-4	0	-4	0	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9941	False	NA	NA	False	NA	NA	NA	87019823	87069179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
tx.16704	chr6	+	6304	20	NIC	ENSMUSG00000029992.15	novel	2286	20	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	34.6378173872402	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGACTTTTTCTTT	9937	False	NA	NA	False	NA	NA	NA	87019819	87069178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_87019988_87027902_87028011_87030183_87030243_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
tx.16705	chr6	-	1973	10	NIC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	20	5	intron_retention	FALSE	canonical	3	41	junction_3	13.2030673577893	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCTGCCCTGAGGTCT	NA	False	NA	NA	False	NA	NA	NA	87649155	87606720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
tx.16706	chr6	-	1181	7	ISM	ENSMUSG00000089997.3	ENSMUST00000238521.2	3678	16	49	36432	49	-36432	5prime_fragment	TRUE	canonical	3	8	junction_6	5.95585612840188	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTGTCCATCGACCCA	NA	False	NA	NA	False	NA	NA	NA	87699734	87689006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_87689250_87690283_87690357_87691104_87691249_87694858_87695064_87695769_87695958_87698819_87699089_87699675
tx.16707	chr6	-	4654	3	FSM	ENSMUSG00000030055.17	ENSMUST00000078647.11	4605	3	-61	12	-61	0	multi-exon	FALSE	canonical	3	38	junction_1	1	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCTCAAGCATGGTC	2633	False	NA	NA	False	NA	NA	NA	87788822	87765846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_87769823_87771595_87771780_87788328
tx.16708	chr6	-	1619	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	37	4181	-5	3058	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTGTGCCTAGAGCT	NA	False	NA	NA	False	NA	NA	NA	87815743	87795431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
tx.16709	chr6	-	1631	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	28	2	7	-2	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	1913	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGATGACAGTTTGGAC	NA	False	NA	NA	False	NA	NA	NA	87828034	87820065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
tx.1671	chr10	+	2307	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	35	5	-21	-5	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	76869080	76886260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
tx.16710	chr6	-	1658	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	49	468	2	-1	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	5971	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGACAGTTTGGACT	NA	False	NA	NA	False	NA	NA	NA	87828039	87820064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
tx.16711	chr6	+	4024	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	109	7	-5	-7	multi-exon	TRUE	canonical	0	0	junction_2	198.307183759023	1430	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGGTGTCAGCCT	NA	False	NA	NA	False	NA	NA	NA	87864904	87890570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
tx.16712	chr6	+	1648	11	ISM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	14383	1047	4394	18	3prime_fragment	FALSE	canonical	3	709	junction_2	77.537410325597	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCATCCCTATGATAA	NA	False	NA	NA	False	NA	NA	NA	87879178	87889530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
tx.16713	chr6	+	1443	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	6	15	6	-15	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	684	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCTGGCAAGAGTTCT	2970	False	NA	NA	False	NA	NA	NA	87890922	87913596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
tx.16714	chr6	+	3620	2	FSM	ENSMUSG00000030060.15	ENSMUST00000148914.2	882	2	-2649	-89	-2649	-11	multi-exon	FALSE	canonical	3	1023	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGCAAGAGTTCTGGCT	NA	False	NA	NA	False	NA	NA	NA	87907325	87913600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_87910417_87913071
tx.16715	chr6	-	2133	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	21	5	-4	-5	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	1777	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCTGCTGTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	88022231	87976092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
tx.16716	chr6	+	2277	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	16	1340	16	577	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	2741	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTGCTGTACTGAAAAA	553	False	NA	NA	False	NA	NA	NA	88061479	88080946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
tx.16717	chr6	+	3385	6	FSM	ENSMUSG00000015053.15	ENSMUST00000170089.8	3135	6	-253	3	-253	-1	multi-exon	FALSE	canonical	3	10	junction_1	57.164324538999	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCGCCTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	88170619	88184011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_88170983_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
tx.16718	chr6	+	3240	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	331	0	331	0	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	343	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCGCCTGTTGAGT	NA	False	NA	NA	False	NA	NA	NA	88175646	88184012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
tx.16719	chr6	+	4302	4	NIC	ENSMUSG00000015053.15	novel	3571	6	NA	NA	333	0	intron_retention	FALSE	canonical	3	138	junction_2	11.8602979164381	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCGCCTGTTGAGT	NA	False	NA	NA	False	NA	NA	NA	88175648	88184012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_88177843_88179400_88179547_88181564_88181691_88182176
tx.1672	chr10	-	3697	32	ISM	ENSMUSG00000001435.16	ENSMUST00000105409.8	4791	41	35368	-838	11091	0	3prime_fragment	FALSE	canonical	3	279	junction_22	36.781323587227	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	76914171	76888011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109
tx.16720	chr6	-	1473	6	NIC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	1	6	combination_of_known_junctions	TRUE	canonical	3	78	junction_2	158.228189650264	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCCCATAGTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	88423508	88234848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_88235374_88258530_88258688_88332464_88332630_88335527_88335625_88353185_88353394_88423187
tx.16721	chr6	-	2132	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	13	534	1	5	multi-exon	FALSE	canonical	3	371	junction_3	47.1643108952333	465	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGCCCATAGTCTGCC	NA	False	NA	NA	False	NA	NA	NA	88423508	88234849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
tx.16722	chr6	-	1967	6	NIC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-6	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	186.723967395726	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGTGCCCATAGTCTG	NA	False	NA	NA	False	NA	NA	NA	88423502	88234851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_88235374_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
tx.16723	chr6	+	1645	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	23	7	23	-7	multi-exon	FALSE	canonical	3	1160	junction_1	83.5499850388975	1126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCTGTAGGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	88442413	88474547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
tx.16724	chr6	-	3079	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	69	24	-8	-24	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	2121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCGTCATCTTTGTA	9164	False	NA	NA	False	NA	NA	NA	88495818	88480584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
tx.16725	chr6	-	2724	2	Intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGATTTATTAGGTG	NA	False	NA	NA	False	NA	NA	NA	88670434	88644033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_-_88646658_88670334
tx.16726	chr6	+	3658	8	FSM	ENSMUSG00000033174.18	ENSMUST00000113585.9	3676	8	17	1	17	-1	multi-exon	FALSE	canonical	2	10	junction_6	2.55550625999976	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGTGTCTGCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	88701410	88805341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_88701554_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
tx.16727	chr6	+	4027	8	FSM	ENSMUSG00000033174.18	ENSMUST00000163271.8	3991	8	-38	2	-38	-2	multi-exon	FALSE	canonical	2	4	junction_1	4.18939379960434	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCCTGTGTCTGCGTGTC	NA	False	NA	NA	False	NA	NA	NA	88701647	88805340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_88702161_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
tx.16728	chr6	-	1540	8	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	2318	1	7	-1	3prime_fragment	FALSE	canonical	3	333	junction_3	29.2665442484229	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	9282	False	NA	NA	False	NA	NA	NA	88816564	88812896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
tx.16729	chr6	-	1833	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	11	1	5	-1	multi-exon	FALSE	canonical	3	139	junction_10	111.135015794021	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	6975	False	NA	NA	False	NA	NA	NA	88818871	88812896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
tx.1673	chr10	-	5016	41	NIC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	64.1984764227314	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5946	False	NA	NA	False	NA	NA	NA	77002371	76888014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
tx.16730	chr6	-	1788	12	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	132.928800926295	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	6984	False	NA	NA	False	NA	NA	NA	88818862	88812897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817854_88817883_88818750
tx.16731	chr6	-	3284	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	87	0	-5	0	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	6161	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	NA	False	NA	NA	NA	88875675	88860455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
tx.16732	chr6	+	1764	12	FSM	ENSMUSG00000002871.15	ENSMUST00000204765.3	1738	12	-26	0	8	0	multi-exon	TRUE	canonical	3	57	junction_1	17.59319928714	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTGAGCTGATGCCT	NA	False	NA	NA	False	NA	NA	NA	88879288	88889213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
tx.16733	chr6	-	4212	8	ISM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	38240	-1	253	1	3prime_fragment	FALSE	canonical	3	155	junction_3	12.442520907381	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	89301362	89293294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235
tx.16734	chr6	-	5231	14	ISM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	30643	-1	1093	1	3prime_fragment	FALSE	canonical	3	152	junction_12	13.7143297407014	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	9020	False	NA	NA	False	NA	NA	NA	89308959	89293294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822
tx.16735	chr6	-	9040	32	FSM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	-5	-1	-5	1	multi-exon	FALSE	canonical	3	115	junction_30	20.9222334925891	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	8985	False	NA	NA	False	NA	NA	NA	89339607	89293294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
tx.16736	chr6	-	1101	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	16	4	16	-4	multi-exon	FALSE	canonical	3	184	junction_4	25.4486277245203	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGGCACCCAGTCACT	NA	False	NA	NA	False	NA	NA	NA	89572618	89360136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
tx.16737	chr6	+	2757	16	FSM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	-6	85	-6	-85	multi-exon	FALSE	canonical	3	51	junction_10	10.7467824642231	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGATCTAATTCGTT	NA	False	NA	NA	False	NA	NA	NA	89620963	89652426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
tx.16738	chr6	+	4150	11	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	37.2210961687052	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCGCTGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	90346505	90380472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90376053_90376108_90377763_90377866_90379001
tx.16739	chr6	+	4057	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	69	0	-45	0	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCGCTGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	90346544	90380472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
tx.1674	chr10	-	5056	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	4	3	4	-3	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	541	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5939	False	NA	NA	False	NA	NA	NA	77002378	76888014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
tx.16740	chr6	+	3035	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	30	1799	28	182	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCCGACTTGCATTTA	NA	False	NA	NA	False	NA	NA	NA	90346503	90360267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
tx.16741	chr6	+	2361	3	FSM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	6	6	6	-3	multi-exon	FALSE	canonical	3	353	junction_2	6.5	368	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTACCATTTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	90439563	90452214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_90439708_90443401_90444506_90451101
tx.16742	chr6	+	1990	2	FSM	ENSMUSG00000030087.12	ENSMUST00000203607.2	2240	2	247	3	247	-3	multi-exon	FALSE	canonical	3	353	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTACCATTTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	90443628	90452214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_90444506_90451101
tx.16743	chr6	+	607	2	NNC	ENSMUSG00000108111.2	novel	661	2	NA	NA	32409	7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGTGTAATTATACAA	9363	False	NA	NA	False	NA	NA	NA	90495783	90496469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_90495862_90495940
tx.16744	chr6	+	3062	23	FSM	ENSMUSG00000030088.16	ENSMUST00000032175.11	3052	23	-10	0	6	0	multi-exon	FALSE	canonical	3	110	junction_1	30.2788691558217	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	90527776	90576151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
tx.16745	chr6	+	3122	23	FSM	ENSMUSG00000030088.16	ENSMUST00000130418.8	4175	23	18	1035	2	-1	multi-exon	FALSE	canonical	3	47	junction_1	39.2549675753126	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	NA	False	NA	NA	NA	90527788	90576150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
tx.16746	chr6	+	2260	11	FSM	ENSMUSG00000030089.16	ENSMUST00000044019.16	2412	11	146	6	146	-6	multi-exon	FALSE	canonical	3	6	junction_2	19.246038553427	4	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAACTCGGTGTCCTCCA	NA	False	NA	NA	False	NA	NA	NA	90581852	90623388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
tx.16747	chr6	+	1435	6	ISM	ENSMUSG00000030089.16	ENSMUST00000032177.10	2324	10	16166	2	16166	-2	3prime_fragment	FALSE	canonical	3	32	junction_4	8.27042925125413	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGGTGTCCTCCATCCT	2818	False	NA	NA	False	NA	NA	NA	90612294	90623392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
tx.16748	chr6	+	1429	6	ISM	ENSMUSG00000030089.16	ENSMUST00000032177.10	2324	10	16168	6	16168	-6	3prime_fragment	FALSE	canonical	3	32	junction_4	8.27042925125413	2	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAACTCGGTGTCCTCCA	2820	False	NA	NA	False	NA	NA	NA	90612296	90623388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
tx.16749	chr6	-	5568	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-103	603	intron_retention	FALSE	canonical	3	17	junction_13	8.16689811691508	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGAGTGGTAACATTAAA	2744	False	NA	NA	False	NA	NA	NA	90713772	90637359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
tx.1675	chr10	+	381	2	ISM	ENSMUSG00000020260.10	ENSMUST00000217993.2	7010	5	-16	8767	-16	-6164	5prime_fragment	FALSE	canonical	3	179	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGAGCAGTTCATTGC	NA	False	NA	NA	False	NA	NA	NA	77095135	77096636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_77095288_77096407
tx.16750	chr6	-	10573	12	NIC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	-10	596	intron_retention	FALSE	canonical	2	9	junction_11	10.0494644403167	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATAGTTGGAGTGGTAA	NA	False	NA	NA	False	NA	NA	NA	90693521	90637366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
tx.16751	chr6	-	2755	8	ISM	ENSMUSG00000030091.18	ENSMUST00000113509.2	6893	40	91191	-2	-122	0	3prime_fragment	FALSE	canonical	3	404	junction_2	26.4189171555813	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	91002610	90990049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203
tx.16752	chr6	-	7029	40	FSM	ENSMUSG00000030091.18	ENSMUST00000032179.14	7037	40	8	0	-2	0	multi-exon	FALSE	non_canonical	3	302	junction_34	44.9993644487226	440	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	91093803	90990049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
tx.16753	chr6	+	2612	10	FSM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	41	0	41	0	multi-exon	FALSE	canonical	3	7	junction_9	4.60541817245838	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGCAGCTGCCCAAGAT	NA	False	NA	NA	False	NA	NA	NA	91133687	91151674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91133830_91134378_91134528_91136142_91136244_91142542_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
tx.16754	chr6	+	4273	17	FSM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	368	3	1	-3	multi-exon	FALSE	canonical	2	6	junction_1	5.3370755100523	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTCAGTCTCTTTGACT	NA	False	NA	NA	False	NA	NA	NA	91189804	91249518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
tx.16755	chr6	-	1336	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	32	2104	32	-2104	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	539	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGGCTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	91450496	91441257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_91442296_91444664_91444764_91450297
tx.16756	chr6	+	2893	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	5	5	5	-5	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGCCAGTCGTTTGCTG	9693	False	NA	NA	False	NA	NA	NA	91450689	91465440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
tx.16757	chr6	-	2255	8	ISM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	16063	0	15970	0	3prime_fragment	FALSE	canonical	3	81	junction_2	10.0813021510728	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGCTGCAAATTTATT	NA	False	NA	NA	False	NA	NA	NA	91476807	91466286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246
tx.16758	chr6	-	3619	16	FSM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	15	0	11	0	multi-exon	FALSE	canonical	3	81	junction_2	18.0017283120878	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGCTGCAAATTTATT	384	False	NA	NA	False	NA	NA	NA	91492855	91466286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
tx.16759	chr6	-	2420	10	ISM	ENSMUSG00000030094.9	ENSMUST00000150279.3	4347	13	-93	5438	0	-5438	5prime_fragment	FALSE	canonical	3	87	junction_8	18.5099239315189	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGTAGAAGTGTTCCT	369	False	NA	NA	False	NA	NA	NA	91492870	91474692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
tx.1676	chr10	+	3429	8	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	80	0	-20	0	intron_retention	FALSE	canonical	3	83	junction_5	29.3813768588616	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGTCCTAGAAATGGT	NA	False	NA	NA	False	NA	NA	NA	77095131	77105409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017
tx.16760	chr6	+	635	4	FSM	ENSMUSG00000034192.6	ENSMUST00000206947.2	618	4	-15	-2	-14	2	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	419	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTTTTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	91493014	91499604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
tx.16761	chr6	+	6153	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	30	3	-12	-3	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	498	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	NA	False	NA	NA	NA	91661063	91736044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
tx.16762	chr6	+	1739	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	13	0	-6	0	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGGAACTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	91855046	91876824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
tx.16763	chr6	+	6111	21	FSM	ENSMUSG00000034037.15	ENSMUST00000089334.9	6095	21	-15	-1	-15	1	multi-exon	FALSE	canonical	0	0	junction_5	1.67032930884901	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTACTTGTAGTATAAAT	NA	False	NA	NA	False	NA	NA	NA	91955843	92052986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91956024_91963781_91966447_92001484_92001615_92015005_92015065_92015167_92015199_92026986_92027148_92027370_92027531_92028060_92028149_92030207_92030259_92030791_92030851_92038784_92038857_92039816_92039886_92042128_92042213_92043163_92043244_92044482_92044583_92044865_92045004_92045428_92045559_92046348_92046483_92048292_92048422_92051078_92051234_92051550
tx.16764	chr6	+	7626	15	FSM	ENSMUSG00000005893.15	ENSMUST00000113460.8	7647	15	21	0	21	0	multi-exon	FALSE	canonical	3	17	junction_1	9.34732309164457	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTGCTGCTCATCT	NA	False	NA	NA	False	NA	NA	NA	92068391	92150038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
tx.16765	chr6	+	7707	16	NIC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	9.13503633757901	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTGCTGCTCATCT	NA	False	NA	NA	False	NA	NA	NA	92068394	92150038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_92068724_92082262_92082347_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
tx.16766	chr6	-	746	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	17	5310	17	3	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	162	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTAAGTGTGGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	92160997	92151815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
tx.16767	chr6	-	5270	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	56	8	-20	-8	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGACTTGTGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	92191850	92163700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
tx.16768	chr6	-	1437	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	-53	0	-53	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	92221684	92219041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_92220107_92220652_92220869_92221528
tx.16769	chr6	-	6642	2	ISM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	69896	-4465	69896	-9	3prime_fragment	FALSE	canonical	3	18	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGGAATGTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	92388477	92347899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_92353802_92387737
tx.1677	chr10	+	2208	9	FSM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	82	0	-18	0	multi-exon	FALSE	canonical	3	83	junction_5	28.5938695352693	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGTCCTAGAAATGGT	NA	False	NA	NA	False	NA	NA	NA	77095133	77105409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
tx.16770	chr6	-	8178	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	1	-4471	1	-3	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATGTTGTCATTCTTCT	NA	False	NA	NA	False	NA	NA	NA	92458372	92347893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
tx.16771	chr6	-	7893	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113446.8	7860	8	-42	9	-42	-9	multi-exon	FALSE	canonical	2	9	junction_7	6.08779307218929	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGGAATGTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	92511884	92347899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92511596
tx.16772	chr6	-	8052	40	FSM	ENSMUSG00000030022.15	ENSMUST00000113438.8	8016	40	-38	2	-38	1	multi-exon	FALSE	canonical	2	6	junction_11	5.38656863230259	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGCTTCTCTTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	92920511	92749681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92800327_92800496_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
tx.16773	chr6	-	5954	22	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	-29632	-893	combination_of_known_junctions	TRUE	canonical	3	14	junction_6	8.0036839590341	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATTGTTCATAGCTT	NA	False	NA	NA	False	NA	NA	NA	93920303	93653328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671190_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
tx.16774	chr6	-	5635	22	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	-29632	-1215	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	8.0036839590341	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAGAATTTATGACAG	NA	False	NA	NA	False	NA	NA	NA	93920303	93653650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
tx.16775	chr6	+	1905	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	0	17	0	-17	multi-exon	FALSE	canonical	3	22	junction_5	7.6610285226392	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTTCCTCTTTCACA	NA	False	NA	NA	False	NA	NA	NA	94477311	94581636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
tx.16776	chr6	+	1859	9	NIC	ENSMUSG00000045100.12	novel	1922	10	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	12.2983738762488	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATACTTCCTCTTTCAC	NA	False	NA	NA	False	NA	NA	NA	94477311	94581635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94569392_94569463_94575360_94575426_94576159_94576234_94580532
tx.16777	chr6	-	5024	19	FSM	ENSMUSG00000030029.15	ENSMUST00000101126.3	4951	19	-68	-5	-47	-2	multi-exon	FALSE	canonical	3	92	junction_14	16.0804305574689	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGCGGCGGTCACT	6692	False	NA	NA	False	NA	NA	NA	94677186	94581511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
tx.16778	chr6	-	4875	18	NIC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-46	2	intron_retention	FALSE	canonical	3	8	junction_2	29.2854936514361	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGTGCGGCGGTCAC	6693	False	NA	NA	False	NA	NA	NA	94677185	94581512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_94582985_94583083_94583345_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
tx.16779	chr6	+	4648	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	150	71	10	-71	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTATCTCATGTCATGT	NA	False	NA	NA	False	NA	NA	NA	95094870	95106700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
tx.1678	chr10	-	6547	11	FSM	ENSMUSG00000020262.16	ENSMUST00000020496.14	6549	11	-5	7	0	-5	multi-exon	FALSE	canonical	2	18	junction_4	10.2024506859872	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACCTGCATGGACATT	NA	False	NA	NA	False	NA	NA	NA	77254104	77126566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
tx.16780	chr6	+	5142	3	NIC	ENSMUSG00000030031.15	novel	4869	4	NA	NA	-40	-71	intron_retention	FALSE	canonical	3	68	junction_2	3.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTATCTCATGTCATGT	NA	False	NA	NA	False	NA	NA	NA	95094924	95106700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_95095715_95098719_95099829_95103457
tx.16781	chr6	-	2229	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	1	1137	1	-4	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	690	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTCACAGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	95695780	95451126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
tx.16782	chr6	-	2292	6	FSM	ENSMUSG00000046500.9	ENSMUST00000089295.6	2190	6	-102	0	-102	0	multi-exon	FALSE	canonical	1	3	junction_3	2.56124969497314	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGTGATTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	97037476	96808163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_96809534_96820711_96820837_96840720_96840877_96991332_96991449_96996875_96997016_97037091
tx.16783	chr6	-	4172	18	FSM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	253	-1	-2	1	multi-exon	FALSE	canonical	3	33	junction_9	6.4238957016875	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAACATCTTCAGGATT	NA	False	NA	NA	False	NA	NA	NA	97125890	97086983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
tx.16784	chr6	-	3997	19	NIC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_17	11.1428712748068	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGAACATCTTCAGGA	NA	False	NA	NA	False	NA	NA	NA	97125899	97086985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97124970_97125151_97125220_97125792
tx.16785	chr6	-	6303	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	12	-163	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	25.5568453403389	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAACTTACTTATGT	7480	False	NA	NA	False	NA	NA	NA	97156071	97130120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_97132459_97133804_97134677_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
tx.16786	chr6	-	5236	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-18	514	-18	-514	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAGTCATAAAATTAAGT	7450	False	NA	NA	False	NA	NA	NA	97156101	97130471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
tx.16787	chr6	-	5611	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-28	-520	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	24.0142373135188	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGTAACAGTCATAAAA	7440	False	NA	NA	False	NA	NA	NA	97156111	97130477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155471
tx.16788	chr6	-	2151	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-19	333	-11	4	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	NA	False	NA	NA	NA	97182540	97160963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
tx.16789	chr6	-	2197	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	67	-7	-12	7	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTATATCAATAATAGTA	NA	False	NA	NA	False	NA	NA	NA	97182541	97160960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
tx.1679	chr10	-	2413	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-19	0	-19	0	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	257	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTCCCCTGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	77351638	77322494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
tx.16790	chr6	+	1393	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	105	-56	105	56	multi-exon	FALSE	canonical	3	281	junction_2	50	223	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATATTTGAATGGTTTA	8553	False	NA	NA	False	NA	NA	NA	97187754	97210332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_97187958_97206497_97206716_97209360
tx.16791	chr6	-	4250	13	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	16.9377946878833	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	97289379	97263827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97288854
tx.16792	chr6	-	3826	13	NNC	ENSMUSG00000030064.17	novel	3996	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_12	12.9871731591854	41	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGTTTGGATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	97289389	97263828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97289287
tx.16793	chr6	+	4933	10	FSM	ENSMUSG00000035158.16	ENSMUST00000043637.14	4881	10	-50	-2	-44	2	multi-exon	FALSE	canonical	3	14	junction_1	22.5738841787048	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGACCAGTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	97783968	97998312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_97784249_97918013_97918264_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
tx.16794	chr6	+	4556	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16096	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	18.3059928711884	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTGACCAGTTGTGT	4131	False	NA	NA	False	NA	NA	NA	97933974	97998311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_97934147_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
tx.16795	chr6	-	2723	15	FSM	ENSMUSG00000030067.18	ENSMUST00000177229.8	1848	15	-53	-822	1	-79	multi-exon	FALSE	canonical	3	13	junction_6	4.40315285926355	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTCTGTAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	99005273	98906228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
tx.16796	chr6	-	4615	4	ISM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	525	0	-212	0	3prime_fragment	FALSE	canonical	3	293	junction_2	5.79271573232759	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	100263921	100205525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443
tx.16797	chr6	-	4476	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	27	0	27	0	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	335	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	100264419	100205525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
tx.16798	chr6	-	1993	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	-2	-1	-2	1	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGTGTAAATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	100648120	100550041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
tx.16799	chr6	-	3866	11	NNC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	-1	-26930	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0821280420765	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTTAGTAAATTTGTT	NA	False	NA	NA	False	NA	NA	NA	100648101	100576973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_100579574_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
tx.168	chr1	-	3208	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	38	2	-23	-2	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTTATGAGTAAATATAGC	NA	False	NA	NA	False	NA	NA	NA	36749051	36737196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
tx.1680	chr10	+	2278	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	16	0	13	0	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	882	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTTTGTTTTGT	1307	False	NA	NA	False	NA	NA	NA	77417569	77434566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
tx.16800	chr6	+	4700	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	22	-8	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	200.648235192125	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTTCACGTGTGGA	9682	False	NA	NA	False	NA	NA	NA	100810604	100846887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842748_100843045_100843217
tx.16801	chr6	+	3435	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	24	1415	24	897	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	695	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGACCTTTGATAG	9684	False	NA	NA	False	NA	NA	NA	100810606	100845480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
tx.16802	chr6	+	3891	2	ISM	ENSMUSG00000052144.9	ENSMUST00000203580.2	1948	6	13285	-2303	-264	-9	3prime_fragment	FALSE	canonical	3	608	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTTTTCACGTGTGG	3667	False	NA	NA	False	NA	NA	NA	100842822	100846886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_100843045_100843217
tx.16803	chr6	-	4208	10	FSM	ENSMUSG00000035357.18	ENSMUST00000075994.11	4104	10	-109	5	-109	-5	multi-exon	FALSE	canonical	3	11	junction_6	4.85340659285368	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	101354967	101126574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101331354_101331463_101339099_101339187_101354126
tx.16804	chr6	+	2232	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	-16	-818	9	-2	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	106746110	106759433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
tx.16805	chr6	+	2257	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	24	2	20	-2	multi-exon	FALSE	canonical	3	574	junction_1	132.149477392081	452	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	106746150	106759433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
tx.16806	chr6	+	4440	8	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	19	3	15	-3	intron_retention	FALSE	canonical	3	574	junction_1	134.183243578112	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTTGTCGTTATTTC	NA	False	NA	NA	False	NA	NA	NA	106746145	106759432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
tx.16807	chr6	-	3344	11	NNC	ENSMUSG00000005362.15	novel	2084	11	NA	NA	0	1338	intron_retention	FALSE	canonical	2	4	junction_6	68.1953810752605	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTGGTGAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	106777026	106755823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767861_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
tx.16808	chr6	-	3418	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	4	-1338	4	1338	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTGGTGAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	106777031	106755823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
tx.16809	chr6	+	3733	2	FSM	ENSMUSG00000034648.10	ENSMUST00000049285.10	3700	2	-33	0	-33	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGCAATAATGTATCAT	NA	False	NA	NA	False	NA	NA	NA	107506695	107547175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_107507205_107543951
tx.1681	chr10	+	1593	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	130	907	2	2	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	949	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCCTATGTTAAACAC	NA	False	NA	NA	False	NA	NA	NA	77442060	77453258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
tx.16810	chr6	-	2586	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	7	0	7	0	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTTCACTTTTTCAT	2479	False	NA	NA	False	NA	NA	NA	108162536	108083988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
tx.16811	chr6	-	1778	8	NNC	ENSMUSG00000030101.16	novel	452	2	NA	NA	7	1936	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	32.630898090676	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGGTCTTTGCTGATC	2479	False	NA	NA	False	NA	NA	NA	108162536	108119337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_108120149_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
tx.16812	chr6	+	2953	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	8	152	8	-152	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	468	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAATGGTCTCCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	108637597	108643734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
tx.16813	chr6	+	2921	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-36	1558	-36	-1558	multi-exon	TRUE	canonical	3	458	junction_6	33.5480583972042	634	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGGTATCATGGTCCC	NA	False	NA	NA	False	NA	NA	NA	108760023	108800681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
tx.16814	chr6	+	6044	13	NNC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	121.143853881794	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	NA	False	NA	NA	NA	108805456	108836317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108828422_108828464_108829450_108829548_108831205_108831410_108832427
tx.16815	chr6	+	5948	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-126	-5	-93	-3	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	445	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTGTTTCTCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	108805508	108836314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
tx.16816	chr6	-	4789	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	28	-2240	-10	2240	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTCATGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	112673619	112594570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
tx.16817	chr6	-	6908	14	FSM	ENSMUSG00000030254.17	ENSMUST00000068487.12	2577	14	5	-4336	5	4211	multi-exon	FALSE	canonical	3	29	junction_4	88.4665550417034	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	112673626	112592599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
tx.16818	chr6	-	2599	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	6	-19	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTATTTCCCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	112673625	112596829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
tx.16819	chr6	-	3606	12	NIC	ENSMUSG00000030254.17	novel	3535	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	112673621	112603375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
tx.1682	chr10	+	1997	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	36	-2	-2	2	multi-exon	FALSE	canonical	3	276	junction_5	14.0427917452336	295	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTGTGGTGCTCACT	126	False	NA	NA	False	NA	NA	NA	77458144	77481829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
tx.16820	chr6	-	4489	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	-26	4424	-26	-4421	multi-exon	FALSE	canonical	3	12	junction_1	6.19450418404635	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATGTGTCTGTAGGTGTG	6427	False	NA	NA	False	NA	NA	NA	112924253	112699355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
tx.16821	chr6	-	4032	20	ISM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	-44	11018	-44	10036	5prime_fragment	FALSE	canonical	3	14	junction_14	5.12989176042577	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCCTTTTGTGCCAGT	6409	False	NA	NA	False	NA	NA	NA	112924271	112705949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
tx.16822	chr6	+	2058	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	105	0	3	0	multi-exon	TRUE	canonical	3	600	junction_1	54.2445309298778	632	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	113023290	113045234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
tx.16823	chr6	-	1108	2	FSM	ENSMUSG00000086429.10	ENSMUST00000159544.3	822	2	90	-376	-33	0	multi-exon	FALSE	canonical	3	30	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGACTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	113054204	113047358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113048397_113054134
tx.16824	chr6	+	2180	3	FSM	ENSMUSG00000034269.13	ENSMUST00000143998.8	2180	3	2	-2	2	2	multi-exon	FALSE	canonical	3	52	junction_2	21	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTGTGTGGTTTTTTT	7845	False	NA	NA	False	NA	NA	NA	113054327	113084524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113054674_113081895_113082083_113082877
tx.16825	chr6	+	3032	4	ISM	ENSMUSG00000034269.13	ENSMUST00000150107.2	3029	7	19746	-1570	18814	2	3prime_fragment	FALSE	canonical	3	33	junction_2	2.35702260395516	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCATAATGTTAACAATG	117	False	NA	NA	False	NA	NA	NA	113124455	113130387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_113124700_113126515_113126650_113127062_113127152_113127822
tx.16826	chr6	+	2473	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	13	190	5	6	multi-exon	TRUE	canonical	3	298	junction_17	28.028204489649	272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGCATTTCATCC	1981	False	NA	NA	False	NA	NA	NA	113214816	113258163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
tx.16827	chr6	+	4843	13	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	6	0	intron_retention	FALSE	canonical	3	111	junction_6	28.8800200061488	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	267	False	NA	NA	False	NA	NA	NA	113284132	113301821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
tx.16828	chr6	+	4502	14	NIC	ENSMUSG00000001632.17	novel	4381	14	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	49.1722007382605	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTCTATTTAGAATTCT	273	False	NA	NA	False	NA	NA	NA	113284138	113301802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
tx.16829	chr6	+	4754	14	FSM	ENSMUSG00000001632.17	ENSMUST00000113121.8	4603	14	-14	-137	12	1	multi-exon	FALSE	canonical	3	30	junction_7	53.3804032920444	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTCTTGCCTTCTAC	273	False	NA	NA	False	NA	NA	NA	113284138	113301819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
tx.1683	chr10	+	1712	6	NNC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.657449106199	37	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTCCCAGGCCCACT	NA	False	NA	NA	False	NA	NA	NA	77814461	77821271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_77814630_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
tx.16830	chr6	+	4499	14	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	39.0967545074748	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTCTTGCCTTCTAC	275	False	NA	NA	False	NA	NA	NA	113284140	113301819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
tx.16831	chr6	+	4729	14	FSM	ENSMUSG00000001632.17	ENSMUST00000113122.8	4773	14	42	2	-13	-2	multi-exon	FALSE	canonical	3	111	junction_6	28.9253272447006	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTCTTCTTGCCTTC	274	False	NA	NA	False	NA	NA	NA	113284139	113301816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
tx.16832	chr6	+	4742	14	FSM	ENSMUSG00000001632.17	ENSMUST00000204626.3	4381	14	-132	-229	-11	-5	multi-exon	FALSE	canonical	3	36	junction_6	42.213040975537	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAATTCTTTCTTCTTGCC	276	False	NA	NA	False	NA	NA	NA	113284141	113301813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
tx.16833	chr6	+	1629	7	FSM	ENSMUSG00000030271.15	ENSMUST00000136263.4	1601	7	-28	0	-1	0	multi-exon	FALSE	canonical	3	33	junction_2	81.0445693567572	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2307	False	NA	NA	False	NA	NA	NA	113303931	113311145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
tx.16834	chr6	+	1411	7	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	89.2070002235749	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2313	False	NA	NA	False	NA	NA	NA	113303937	113311149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_113304324_113305325_113305441_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
tx.16835	chr6	+	2156	6	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	238	junction_4	8.77724330299668	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2317	False	NA	NA	False	NA	NA	NA	113303941	113311149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_113304324_113305325_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
tx.16836	chr6	+	1545	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	4	0	4	0	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2312	False	NA	NA	False	NA	NA	NA	113303936	113311149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
tx.16837	chr6	-	1470	12	FSM	ENSMUSG00000030272.16	ENSMUST00000032409.15	1496	12	23	3	2	1	multi-exon	FALSE	canonical	3	50	junction_1	8.10570659096682	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTCCGTTTGCTCAAAT	5816	False	NA	NA	False	NA	NA	NA	113320922	113311087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
tx.16838	chr6	-	1738	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	480	630	-27	0	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	NA	False	NA	NA	NA	113354364	113343615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
tx.16839	chr6	-	2292	9	NIC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	-4	12	intron_retention	FALSE	canonical	3	198	junction_8	66.8663545813588	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCGCAAGTTTAGTATC	NA	False	NA	NA	False	NA	NA	NA	113354482	113343603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852
tx.1684	chr10	-	2728	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	49	953	-22	-953	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	1691	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGGGACAACATGACCA	NA	False	NA	NA	False	NA	NA	NA	77845592	77823733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
tx.16840	chr6	-	1748	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-5	11	combination_of_known_splicesites	FALSE	canonical	3	29	junction_9	124.029068675626	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCGCAAGTTTAGTAT	NA	False	NA	NA	False	NA	NA	NA	113354483	113343604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354450
tx.16841	chr6	-	2183	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-38	0	intron_retention	FALSE	canonical	3	134	junction_9	97.0713114476818	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	NA	False	NA	NA	NA	113354755	113343615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
tx.16842	chr6	+	1444	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	31	795	-1	1	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	766	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTGCTCTGTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	113355106	113366614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
tx.16843	chr6	+	1382	5	ISM	ENSMUSG00000079426.14_ENSMUSG00000030276.20	ENSMUST00000204802.2	794	6	2155	-638	2155	1	3prime_fragment	FALSE	canonical	3	1123	junction_4	109.922700112397	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTGCTCTGTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	113357685	113366614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
tx.16844	chr6	+	3582	11	ISM	ENSMUSG00000030276.20	ENSMUST00000203524.3	2745	13	-111	0	-111	0	intron_retention	FALSE	canonical	3	13	junction_6	3.96106046406767	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAAAGTTCTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	113370009	113391544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
tx.16845	chr6	-	1257	9	FSM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	5	7	-4	3	multi-exon	FALSE	canonical	3	151	junction_2	15.858258889298	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAGATGTTTACCAAG	NA	False	NA	NA	False	NA	NA	NA	113396296	113392286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
tx.16846	chr6	+	1023	2	NNC	ENSMUSG00000051256.11	novel	1201	2	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_1	0	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAAGACTGTCCTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	113419522	113425173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_113419591_113424218
tx.16847	chr6	+	1161	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	34	6	-7	-6	multi-exon	FALSE	canonical	3	705	junction_1	0	302	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCCTCGTGTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	113419563	113425184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113419759_113424218
tx.16848	chr6	+	2259	17	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	68	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	10.8137643769411	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTAGCACTCGTGTA	5824	False	NA	NA	False	NA	NA	NA	113448455	113460099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
tx.16849	chr6	+	2303	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	8.17117899020487	34	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	5827	False	NA	NA	False	NA	NA	NA	113448458	113460101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
tx.16850	chr6	+	2077	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	230	-1	104	1	multi-exon	TRUE	canonical	3	165	junction_1	17.0945085399441	223	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTTCAGTCTTAACAA	1687	False	NA	NA	False	NA	NA	NA	113460487	113470300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
tx.16851	chr6	-	4565	3	NIC	ENSMUSG00000045009.10	novel	1903	3	NA	NA	1	-7	intron_retention	FALSE	canonical	3	12	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTATTTTATGTGTAT	4286	False	NA	NA	False	NA	NA	NA	113478891	113470606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113474046_113474232_113475278_113478810
tx.16852	chr6	-	3419	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	4	1	4	-1	multi-exon	FALSE	canonical	3	8	junction_1	2.62466929133727	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCGCTCTGGTCA	4289	False	NA	NA	False	NA	NA	NA	113478888	113470886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113473027_113473892_113474049_113474232_113475278_113478810
tx.16853	chr6	-	4657	3	NIC	ENSMUSG00000045009.10	novel	1956	3	NA	NA	-6	-1	intron_retention	FALSE	canonical	2	4	junction_2	4	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATGTGTATGAATGT	4279	False	NA	NA	False	NA	NA	NA	113478898	113470600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113474046_113474232_113475357_113478810
tx.16854	chr6	-	1959	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	16	10	16	-10	multi-exon	FALSE	canonical	3	306	junction_2	13.3386044002714	403	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGAAAGTGTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	113508597	113491844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
tx.16855	chr6	+	5467	43	FSM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	-14	-746	8	2	multi-exon	TRUE	canonical	3	81	junction_38	50.0643576738687	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	113508650	113573980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
tx.16856	chr6	+	5503	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	11	-2	11	2	multi-exon	FALSE	canonical	3	237	junction_19	37.6323336574577	403	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	113508653	113573980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
tx.16857	chr6	+	1106	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-14	3	-14	-3	multi-exon	FALSE	canonical	3	441	junction_2	10.5	109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGATGTTTATGATCT	NA	False	NA	NA	False	NA	NA	NA	113581718	113593909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113581858_113592736_113592820_113593025
tx.16858	chr6	+	2750	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	42	0	42	0	multi-exon	FALSE	canonical	3	134	junction_1	12	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGTGTTGTGTTACCT	200	False	NA	NA	False	NA	NA	NA	113600961	113608594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113601340_113605052_113605176_113606345
tx.16859	chr6	+	3164	13	FSM	ENSMUSG00000060477.15	ENSMUST00000059286.14	3196	13	17	15	-4	2	multi-exon	FALSE	canonical	2	5	junction_1	6.70820393249937	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGTCTTATAATTTTG	NA	False	NA	NA	False	NA	NA	NA	113615444	113671972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_113615603_113624599_113624783_113642663_113642808_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
tx.16860	chr6	+	1831	3	ISM	ENSMUSG00000060477.15	ENSMUST00000113024.3	1887	10	16983	-1213	-3984	2	3prime_fragment	FALSE	canonical	3	24	junction_1	1	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGTCTTATAATTTTG	3008	False	NA	NA	False	NA	NA	NA	113663721	113671972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_113663920_113667743_113668033_113670628
tx.16861	chr6	-	1632	8	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	15	-5	intron_retention	FALSE	canonical	3	942	junction_7	83.0657472568985	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTGTCATCCCACACA	20	True	NA	NA	False	NA	NA	NA	113717673	113705027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113705425_113706556_113706704_113707295_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
tx.16862	chr6	-	1315	9	FSM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	33	5	17	-5	multi-exon	FALSE	canonical	3	942	junction_8	78.4968152220203	480	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTGTCATCCCACACA	2210	False	NA	NA	False	NA	NA	NA	113717671	113705027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
tx.16863	chr6	-	6977	22	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	8.97337962810631	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAATGGTTATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	113868318	113722630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
tx.16864	chr6	-	7003	23	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	23	-6	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	7.70799734953872	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACTATGCAATGGTTAT	NA	False	NA	NA	False	NA	NA	NA	113868308	113722636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
tx.16865	chr6	-	2352	12	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	17	13862	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	6.72972928120791	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGGGACATGGTTT	NA	False	NA	NA	False	NA	NA	NA	113868314	113766436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
tx.16866	chr6	-	2300	11	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	23	13858	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	9.96192752432982	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTTTTTTGGGACATG	NA	False	NA	NA	False	NA	NA	NA	113868308	113766440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113766957_113770626_113770842_113773199_113773359_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
tx.16867	chr6	+	4168	16	FSM	ENSMUSG00000030310.11	ENSMUST00000032454.8	4302	16	127	7	-28	-7	multi-exon	FALSE	canonical	3	71	junction_3	10.8558228103119	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTATTGGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	114259722	114294486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
tx.16868	chr6	+	2349	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	22	1390	1	0	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	114620079	114836185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
tx.16869	chr6	+	3261	21	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	-647	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	41.3278356558869	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTGCCAAACCTTTT	NA	False	NA	NA	False	NA	NA	NA	114620082	114836926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_114620112_114623897_114624019_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
tx.1687	chr10	+	2814	7	FSM	ENSMUSG00000000732.10	ENSMUST00000105393.3	2814	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.83045891539648	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	77905135	77915359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977_77913008_77913726
tx.16870	chr6	+	3140	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	-647	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTGCCAAACCTTTT	NA	False	NA	NA	False	NA	NA	NA	114620082	114836926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
tx.16871	chr6	+	2557	21	FSM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	-14	0	-1	0	multi-exon	FALSE	canonical	3	8	junction_1	41.8782759912583	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	114620075	114836185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
tx.16872	chr6	-	1156	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	8	4	8	3	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTGTCACTCTGACT	NA	False	NA	NA	False	NA	NA	NA	115014829	114981345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
tx.16873	chr6	-	2334	4	ISM	ENSMUSG00000030316.14	ENSMUST00000154621.3	724	6	-30	14260	0	815	5prime_fragment	FALSE	canonical	3	21	junction_2	197.90626288445	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGCAAATGTTTC	NA	False	NA	NA	False	NA	NA	NA	115014816	115007423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_115009274_115011116_115011212_115011911_115012095_115014610
tx.16874	chr6	-	2682	4	NIC	ENSMUSG00000030316.14	novel	531	2	NA	NA	7	1701	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	196.862614248843	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCTTTGATGATGATAT	NA	False	NA	NA	False	NA	NA	NA	115014830	115006537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_115008724_115009180_115009274_115011911_115012095_115014610
tx.16875	chr6	+	1784	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	34	288	-4	-288	multi-exon	FALSE	canonical	3	175	junction_1	38.6343314973604	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGAGAATAAATGCAGT	NA	False	NA	NA	False	NA	NA	NA	115521658	115555301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
tx.16876	chr6	+	1704	11	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	-6	-288	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	74.5318723768563	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGAGAATAAATGCAGT	NA	False	NA	NA	False	NA	NA	NA	115521656	115555301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_115521690_115524782_115524992_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
tx.16877	chr6	+	2391	8	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	14000	251	13958	-251	3prime_fragment	FALSE	canonical	3	236	junction_4	25.7452194888801	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCATTGCCCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	115535624	115555338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
tx.16878	chr6	+	2281	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	7	3942	7	-3942	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	563	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGTATTCCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	115578869	115595643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
tx.16879	chr6	-	2982	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	65	23	65	5	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	1275	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTACTGACTCCTTCA	8209	False	NA	NA	False	NA	NA	NA	115653531	115595552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
tx.1688	chr10	-	1362	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	7	9	-1	0	multi-exon	FALSE	canonical	3	30	junction_5	5.05799696849784	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCAGCTATGTCTCA	4138	False	NA	NA	False	NA	NA	NA	78005609	77997908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
tx.16880	chr6	+	4775	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	33	666	33	-666	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCGTGACAGTCAACCC	NA	False	NA	NA	False	NA	NA	NA	115751531	115781852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
tx.16881	chr6	+	3128	6	ISM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	17302	664	17302	-664	3prime_fragment	FALSE	canonical	3	54	junction_2	13.0476051442401	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGTGACAGTCAACCCTT	6524	False	NA	NA	False	NA	NA	NA	115768800	115781854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
tx.16882	chr6	-	506	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	4	7	4	0	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	2567	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	115785704	115782472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
tx.16883	chr6	-	3608	8	FSM	ENSMUSG00000030322.13	ENSMUST00000032469.13	3614	8	4	2	-2	-2	multi-exon	FALSE	canonical	0	0	junction_7	37.2010533096435	194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCCCTTTGGCATTGTG	7885	False	NA	NA	False	NA	NA	NA	115830328	115817659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
tx.16884	chr6	+	4016	29	FSM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	102	4	-8	0	multi-exon	FALSE	canonical	3	30	junction_5	9.69483346522091	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	NA	False	NA	NA	NA	115830532	115903656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
tx.16885	chr6	+	3095	20	ISM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	33750	4	80	0	3prime_fragment	FALSE	canonical	3	39	junction_19	8.12062795219373	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	NA	False	NA	NA	NA	115864180	115903656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
tx.16886	chr6	-	4394	3	ISM	ENSMUSG00000030126.18	ENSMUST00000172510.4	2612	4	13662	-2724	13606	-12	3prime_fragment	FALSE	canonical	3	18	junction_2	3	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCAATTGACTCAGCTT	NA	False	NA	NA	False	NA	NA	NA	116020310	115995583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_115999363_116001762_116001899_116019831
tx.16887	chr6	-	3325	6	FSM	ENSMUSG00000030126.18	ENSMUST00000088896.10	5838	6	-39	2552	-39	7	multi-exon	FALSE	canonical	2	10	junction_4	4.84148737476408	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGTGGATATTTCAGCG	NA	False	NA	NA	False	NA	NA	NA	116170486	115998123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_115999363_116001762_116001899_116019831_116020767_116110727_116111419_116115155_116115212_116170218
tx.16888	chr6	+	4265	31	FSM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	23	19	5	2	multi-exon	FALSE	canonical	3	196	junction_27	51.0355975983648	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	NA	False	NA	NA	NA	116185021	116239628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
tx.16889	chr6	+	4205	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	2	2	combination_of_known_splicesites	TRUE	canonical	3	101	junction_26	58.2477793996823	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	NA	False	NA	NA	NA	116185018	116239628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
tx.1689	chr10	-	3865	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	7	0	7	0	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	379	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTGTCTGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	78020976	78006742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
tx.16890	chr6	+	3093	9	FSM	ENSMUSG00000042213.18	ENSMUST00000222819.2	3087	9	-8	2	-8	-2	multi-exon	FALSE	canonical	1	1	junction_2	6.0917464655056	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATGACTTTATTTGAT	NA	False	NA	NA	False	NA	NA	NA	116241174	116307257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_116241274_116250533_116250834_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
tx.16891	chr6	+	1250	5	NNC	ENSMUSG00000042213.18	novel	374	4	NA	NA	104	-17460	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.73861278752583	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTTTCCATTCATTT	NA	False	NA	NA	False	NA	NA	NA	116241329	116265371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_116241707_116250533_116250834_116261700_116261777_116262814_116262883_116264942
tx.16892	chr6	+	4361	7	NIC	ENSMUSG00000025702.16	novel	4450	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	11.9256958799989	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	116314968	116386501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_116315177_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
tx.16893	chr6	+	4451	8	FSM	ENSMUSG00000025702.16	ENSMUST00000079012.13	4450	8	-3	2	-3	0	multi-exon	FALSE	canonical	2	9	junction_1	11.0564414690796	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGATGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	116314981	116386499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_116315177_116315346_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
tx.16894	chr6	+	4620	7	FSM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	-9	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.30296743340222	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	116314984	116386501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
tx.16895	chr6	-	2819	14	FSM	ENSMUSG00000025701.13	ENSMUST00000026795.13	2821	14	6	-4	6	4	multi-exon	FALSE	canonical	0	0	junction_2	0.923076923076923	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTATGCTATGATTCA	NA	False	NA	NA	False	NA	NA	NA	116438133	116387033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_116387860_116389420_116389592_116390082_116390184_116390402_116390525_116390698_116390878_116391483_116391571_116392334_116392539_116397201_116397349_116400103_116400277_116401097_116401205_116404103_116404227_116425230_116425313_116431077_116431277_116437835
tx.16896	chr6	-	2377	2	FSM	ENSMUSG00000059878.13	ENSMUST00000057540.6	2375	2	-17	15	-17	3	multi-exon	FALSE	canonical	3	18	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTATCTATTTTACTTCT	NA	False	NA	NA	False	NA	NA	NA	116605900	116601879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_116604095_116605738
tx.16897	chr6	-	2262	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	22	903	22	3	multi-exon	FALSE	canonical	3	68	junction_1	0	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTATCTATTTTACTTCT	NA	False	NA	NA	False	NA	NA	NA	116605938	116601879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_116604095_116605891
tx.16898	chr6	-	4716	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	117	1627	-26	-1627	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTCTGTTAAGTGTGT	8723	False	NA	NA	False	NA	NA	NA	116650796	116611595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
tx.16899	chr6	+	1209	3	FSM	ENSMUSG00000059689.16	ENSMUST00000136889.8	659	3	-7	-543	7	0	multi-exon	FALSE	canonical	3	25	junction_1	15.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	NA	False	NA	NA	NA	117818221	117822917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_117818359_117820213_117820354_117821985
tx.1690	chr10	-	3668	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	20	8	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTCTCTTTTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	78188256	78107388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
tx.16900	chr6	+	1159	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	-60	-1	1	0	multi-exon	FALSE	canonical	3	26	junction_1	15	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	NA	False	NA	NA	NA	117818142	117822917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_117818230_117820213_117820354_117821985
tx.16901	chr6	+	2885	5	NNC	ENSMUSG00000042097.18	novel	2812	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	9.98436277385793	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTCCAATGTGTTCATT	NA	False	NA	NA	False	NA	NA	NA	117840038	117849725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_117840104_117843355_117843536_117846178_117846235_117846362_117846438_117847216
tx.16902	chr6	+	2617	3	FSM	ENSMUSG00000042097.18	ENSMUST00000079405.15	3158	3	16	525	9	1	multi-exon	FALSE	canonical	3	13	junction_1	2	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCAATGTGTTCATTTG	NA	False	NA	NA	False	NA	NA	NA	117840053	117849727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_117840104_117846178_117846235_117847216
tx.16903	chr6	+	2155	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	-6	-2	-1	0	multi-exon	TRUE	canonical	3	2150	junction_1	1335.10981654028	2727	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	3728	False	NA	NA	False	NA	NA	NA	117883749	117902582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
tx.16904	chr6	+	2201	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	934	0	at_least_one_novel_splicesite	FALSE	canonical	3	602	junction_1	2063.97825139274	891	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	4722	False	NA	NA	False	NA	NA	NA	117884743	117902582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117900668
tx.16905	chr6	+	2279	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	1	0	1	0	multi-exon	FALSE	canonical	3	4878	junction_1	99	790	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	NA	False	NA	NA	False	NA	NA	NA	117894255	117902582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_117894560_117896059_117896121_117900668
tx.16906	chr6	+	3363	14	NNC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-91	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	11.8646209703147	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTTGTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	118043288	118068505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_118043424_118054858_118054931_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
tx.16907	chr6	+	3275	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-73	-975	-73	0	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	118043306	118068507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
tx.16908	chr6	+	3224	13	NNC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	9.46484724300046	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	118043332	118068507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066420_118066469_118066776
tx.16909	chr6	-	3643	8	FSM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	18	0	18	0	multi-exon	FALSE	canonical	3	37	junction_1	9.61291648072041	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGTAAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	118116083	118084412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
tx.1691	chr10	-	3637	11	NNC	ENSMUSG00000001211.16	novel	3681	11	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	150.89599066907	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTCTCTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	78188046	78107389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187866
tx.16910	chr6	-	3540	8	NNC	ENSMUSG00000042042.15	novel	3661	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	17.0700836290289	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGTAAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	118116089	118084412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_118086356_118091326_118091409_118096570_118096666_118098014_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
tx.16911	chr6	-	2852	14	ISM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	14172	0	14102	0	3prime_fragment	FALSE	canonical	3	339	junction_13	47.6483668545452	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	NA	False	NA	NA	False	NA	NA	NA	118382263	118360341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540
tx.16912	chr6	-	4294	23	FSM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	51	0	-11	0	multi-exon	FALSE	canonical	2	285	junction_22	59.9717047606688	655	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	8336	False	NA	NA	False	NA	NA	NA	118396384	118360341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
tx.16913	chr6	-	3645	6	FSM	ENSMUSG00000030145.15	ENSMUST00000069292.14	3683	6	29	9	-1	-9	multi-exon	FALSE	canonical	3	13	junction_5	4.48998886412873	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGAATTTCATTGTGT	NA	False	NA	NA	False	NA	NA	NA	118432460	118404288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430849_118431637_118431873_118432376
tx.16914	chr6	-	6987	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	12.9133582362079	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	NA	NA	NA	118539229	118478268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
tx.16915	chr6	-	6816	33	NIC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-61	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_31	15.2063925702318	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAATCCTATATTTA	NA	False	NA	NA	False	NA	NA	NA	118539248	118478269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118536231_118536347_118538773
tx.16916	chr6	-	6972	34	FSM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	-42	0	-42	0	multi-exon	FALSE	canonical	3	23	junction_21	12.4668891127898	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	NA	NA	NA	118539229	118478268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
tx.16917	chr6	-	7418	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-40	0	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_21	14.0305321010163	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	NA	NA	NA	118539227	118478268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
tx.16918	chr6	+	1967	9	NNC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	15.8981130955846	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119152218	119197167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194694_119194941_119196963
tx.16919	chr6	+	1892	9	FSM	ENSMUSG00000041477.15	ENSMUST00000112777.9	3313	9	11	1410	11	0	multi-exon	FALSE	canonical	3	31	junction_6	11.8684192291981	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119152224	119197167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194763_119194941_119196963
tx.1692	chr10	-	3579	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	20	2381	20	4	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	326	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCTTTTTCTCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	78188256	78107392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
tx.16920	chr6	+	4079	8	NIC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-13	2	intron_retention	FALSE	canonical	3	31	junction_6	11.7038280847223	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGGGGGTTTTGTTCC	NA	False	NA	NA	False	NA	NA	NA	119152235	119197169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119194941_119196963
tx.16921	chr6	+	5063	2	FSM	ENSMUSG00000041477.15	ENSMUST00000127059.2	2048	2	-4423	1408	-4423	0	multi-exon	FALSE	canonical	3	71	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119190081	119197167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_119194941_119196963
tx.16922	chr6	-	4151	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	-50	-612	-50	-3	multi-exon	TRUE	canonical	3	86	junction_7	15.2168005969771	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTGTTGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	119365697	119330113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
tx.16923	chr6	-	4002	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	179	3	-50	-3	multi-exon	FALSE	canonical	3	26	junction_7	32.1685611510775	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTGTTGTGTTTTTT	7504	False	NA	NA	False	NA	NA	NA	119394486	119330113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
tx.16924	chr6	-	2178	5	FSM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	-6	2	-6	0	multi-exon	FALSE	canonical	3	7	junction_4	2.73861278752583	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTCCCTCTCCTTA	NA	False	NA	NA	False	NA	NA	NA	119426353	119409493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119426177
tx.16925	chr6	-	8736	20	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-4	0	intron_retention	TRUE	canonical	0	0	junction_18	36.0633483879812	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCAGCCTTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	119825099	119547756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119824837
tx.16926	chr6	-	8623	19	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	-3	intron_retention	FALSE	canonical	3	90	junction_15	15.3676146570284	71	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTGCAGCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	119825128	119547759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
tx.16927	chr6	-	3960	15	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	5	27463	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	15.582073687676	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTCTCTTGAAGTTC	NA	False	NA	NA	False	NA	NA	NA	119825106	119670775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
tx.16928	chr6	+	1680	12	FSM	ENSMUSG00000030166.15	ENSMUST00000162461.7	1693	12	13	0	11	0	multi-exon	FALSE	canonical	3	22	junction_8	13.1028985500622	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTTTGGCTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	119879676	119899784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767_119897990_119899432
tx.16929	chr6	-	5287	10	ISM	ENSMUSG00000045962.17	ENSMUST00000203030.3	8163	26	88659	-652	-574	0	3prime_fragment	FALSE	canonical	3	12	junction_5	2.94811092476036	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGTTGTTCTTTCTGA	7737	False	NA	NA	False	NA	NA	NA	119925961	119900929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329_119913533_119914317_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935
tx.1693	chr10	-	1951	12	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	278.451176781927	678	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTTCTCCCATTT	NA	False	NA	NA	False	NA	NA	NA	78248840	78236219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
tx.16930	chr6	-	6393	20	FSM	ENSMUSG00000041372.11	ENSMUST00000057283.8	3677	20	-378	-2338	-378	2317	multi-exon	FALSE	canonical	3	28	junction_7	11.9409906464132	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAATGTGTTTCATGTA	NA	False	NA	NA	False	NA	NA	NA	120271898	120177716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
tx.16931	chr6	-	6388	20	FSM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	-380	-3050	-380	2313	multi-exon	FALSE	canonical	3	34	junction_7	11.0924096230953	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTAATGTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	120271900	120177720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
tx.16932	chr6	-	5553	19	ISM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	-401	366	-401	-366	5prime_fragment	FALSE	canonical	3	34	junction_6	11.3747880186461	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTATTGTCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	120271921	120181136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
tx.16933	chr6	-	2873	12	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	85.5177715811067	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	NA	False	NA	NA	NA	120334309	120301281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120333945
tx.16934	chr6	-	2504	12	FSM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	95	-712	0	0	multi-exon	FALSE	canonical	3	197	junction_10	38.004349468349	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	NA	False	NA	NA	NA	120334338	120301283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
tx.16935	chr6	-	2565	12	FSM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	45	0	-7	0	multi-exon	FALSE	canonical	3	123	junction_10	52.5397920824409	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	NA	False	NA	NA	NA	120334345	120301283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
tx.16936	chr6	+	8701	29	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-5	-2330	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	8.37878759920867	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGACTCCTCAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	120341079	120419205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
tx.16937	chr6	+	8628	28	FSM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	-14	2330	-14	-2330	multi-exon	FALSE	canonical	3	38	junction_13	7.14421307921747	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGACTCCTCAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	120341070	120419205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
tx.16938	chr6	+	3956	12	NNC	ENSMUSG00000002897.6	novel	7752	13	NA	NA	-41	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	10.3052582261406	47	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATAGTTGTTATTGAAT	271	False	NA	NA	False	NA	NA	NA	120440166	120460691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455331_120455444_120456963_120457006_120457943
tx.16939	chr6	+	3949	12	NIC	ENSMUSG00000002897.6	novel	7752	13	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	10.3052582261406	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCATAGTTGTTATTGAA	273	False	NA	NA	False	NA	NA	NA	120440168	120460690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455335_120455444_120456963_120457006_120457943
tx.1694	chr10	+	570	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	33	0	33	0	multi-exon	TRUE	canonical	3	3631	junction_2	117.5	400	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTCCTTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	78261535	78263456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_78261692_78262760_78262863_78263144
tx.16940	chr6	-	2227	8	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	78.843425307921	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	NA	False	NA	NA	NA	120508270	120486454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120507818
tx.16941	chr6	-	2094	7	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	207	junction_2	17.2086864370552	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	NA	False	NA	NA	NA	120508278	120486454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
tx.16942	chr6	-	1928	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	NA	False	NA	NA	NA	120508280	120486454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
tx.16943	chr6	-	1915	8	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	77.5305074911595	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	NA	False	NA	NA	NA	120508313	120486454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_120487378_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
tx.16944	chr6	+	9199	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	31.1467116572332	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAAGGCTTTCGTGTATG	NA	False	NA	NA	False	NA	NA	NA	120643308	120748149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
tx.16945	chr6	+	6013	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-262	-902	-49	902	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTGTAAAGGAATATGA	NA	False	NA	NA	False	NA	NA	NA	120643280	120744767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
tx.16946	chr6	+	5939	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-59	902	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	29.3618399808122	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTGTAAAGGAATATGA	NA	False	NA	NA	False	NA	NA	NA	120643270	120744767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
tx.16947	chr6	+	9178	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	32.559447892414	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTTTCGTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	120643328	120748151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
tx.16948	chr6	+	5917	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-84	3379	-32	907	multi-exon	TRUE	canonical	3	53	junction_14	26.8930781860498	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAGGAATATGATTTTT	NA	False	NA	NA	False	NA	NA	NA	120643297	120744772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
tx.16949	chr6	+	5902	19	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-27	900	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	28.4433593543032	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTGTAAAGGAATAT	NA	False	NA	NA	False	NA	NA	NA	120643302	120744765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
tx.1695	chr10	-	5126	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-5	3	-5	-3	multi-exon	TRUE	canonical	3	285	junction_4	40.3910881259715	222	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAGTGTGGTCATT	6797	False	NA	NA	False	NA	NA	NA	78300814	78272580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
tx.16950	chr6	+	7391	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-40	-1910	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	30.8887948463326	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGCCAGATTGGTTT	NA	False	NA	NA	False	NA	NA	NA	120643289	120746241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
tx.16951	chr6	+	7443	19	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-10	-1912	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	26.6106471775843	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGAGCCAGATTGGT	NA	False	NA	NA	False	NA	NA	NA	120643319	120746239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
tx.16952	chr6	+	5216	4	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	91	-1495	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	41.6519974177576	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTCAGACTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	120735186	120746656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120735593_120738104_120739519_120742232_120742345_120743372
tx.16953	chr6	+	5993	3	ISM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	95035	0	3321	0	3prime_fragment	FALSE	canonical	3	124	junction_1	19	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTTTCGTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	120738416	120748151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_120739519_120742232_120742345_120743372
tx.16954	chr6	-	1251	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	61	0	-40	0	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	546	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTTGTTCCTTATG	NA	False	NA	NA	False	NA	NA	NA	120799693	120772204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
tx.16955	chr6	+	3115	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-22	3832	4	-3832	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGTTTTGAATGTC	NA	False	NA	NA	False	NA	NA	NA	120813176	120865971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
tx.16956	chr6	-	2318	4	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	15922	250	-3363	-250	3prime_fragment	FALSE	canonical	3	883	junction_1	35.2798337108704	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCCAAATGACCTAGTA	NA	False	NA	NA	False	NA	NA	NA	120877892	120870064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116
tx.16957	chr6	-	1910	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	14	265	-3	-265	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	939	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	120893800	120870079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
tx.16958	chr6	-	1834	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-3	-265	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	358.381137896514	115	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	120893817	120870079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893787
tx.16959	chr6	-	3509	21	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-60	-14810	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	16.1133485036475	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTTTACATCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	121087114	120950113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
tx.1696	chr10	+	2517	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	39.9503024602651	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5377	False	NA	NA	False	NA	NA	NA	78410311	78420333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
tx.16960	chr6	-	2836	18	NIC	ENSMUSG00000051586.18	novel	2875	18	NA	NA	-61	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	13.1507101127881	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCCTTTAGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	121087115	120984196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
tx.16961	chr6	+	3863	5	FSM	ENSMUSG00000067825.12	ENSMUST00000120066.8	3861	5	-2	0	-2	0	multi-exon	FALSE	canonical	2	7	junction_4	16.7406690427832	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATTTCATCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	121160845	121173144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170473
tx.16962	chr6	+	3874	5	FSM	ENSMUSG00000067825.12	ENSMUST00000088561.10	4093	5	219	0	-3	0	multi-exon	FALSE	canonical	3	35	junction_4	5.31507290636732	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTGTTTCTACTTTC	NA	False	NA	NA	False	NA	NA	NA	121160844	121173151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170470
tx.16963	chr6	+	1518	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8366	-756	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCCTCTTTCTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	121179288	121203057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
tx.16964	chr6	+	4598	35	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	11.9821450211537	77	5	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCCTTCATTAACTGAG	NA	False	NA	NA	False	NA	NA	NA	121613192	121656186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
tx.16965	chr6	+	2252	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	261	2	-18	-2	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	1489	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGGCTTTGTCGTTTGTG	2925	False	NA	NA	False	NA	NA	NA	122285939	122294637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
tx.16966	chr6	-	4021	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	9	3	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_14	273.877300100253	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTTGGCCTCCATTGT	9035	False	NA	NA	False	NA	NA	NA	122316658	122294705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
tx.16967	chr6	-	3801	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_13	297.259673702081	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTTGGCCTCCATTGT	9099	False	NA	NA	False	NA	NA	NA	122316594	122294705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
tx.16968	chr6	-	2461	8	ISM	ENSMUSG00000040669.15	ENSMUST00000081849.10	3683	13	13417	14	11547	5	3prime_fragment	FALSE	canonical	3	902	junction_5	80.0357063173324	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGCCTCCATTGTCT	NA	False	NA	NA	False	NA	NA	NA	122300557	122294703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966
tx.16969	chr6	-	4055	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	-171	9	-121	3	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	1009	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTTGGCCTCCATTGT	8905	False	NA	NA	False	NA	NA	NA	122316788	122294705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
tx.1697	chr10	+	2251	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	3	-21	2	0	multi-exon	FALSE	canonical	3	132	junction_8	19.815990244945	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTATACTGGTTTA	5896	False	NA	NA	False	NA	NA	NA	78410830	78420334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
tx.16970	chr6	-	3905	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-190	-103	-127	3	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	593	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTTGGCCTCCATTGT	8899	False	NA	NA	False	NA	NA	NA	122316794	122294705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
tx.16971	chr6	-	4423	2	ISM	ENSMUSG00000040649.16	ENSMUST00000135320.2	429	3	-1354	-2	-1354	0	intron_retention	FALSE	canonical	3	70	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTGTGATTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	122431045	122424254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_122424419_122426786
tx.16972	chr6	-	1938	5	ISM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	13740	2374	-211	-1215	3prime_fragment	FALSE	canonical	3	147	junction_2	19.0180834996589	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTATTTGTTAGTGTTT	6159	False	NA	NA	False	NA	NA	NA	122449724	122432433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497
tx.16973	chr6	-	2451	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	-14	2288	-14	-1129	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTATGACTGCATCTTT	9226	False	NA	NA	False	NA	NA	NA	122463478	122432347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
tx.16974	chr6	-	2019	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-45	-1227	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	64.001874972535	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCATTGACTTGTAT	9195	False	NA	NA	False	NA	NA	NA	122463509	122432445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463414
tx.16975	chr6	-	2161	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	398	-1231	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	61.6914904990956	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGCATTGACTT	9704	False	NA	NA	False	NA	NA	NA	122463000	122432449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122462759
tx.16976	chr6	+	1202	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	336	-12	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGCAAAAAGAAAGCTC	8067	False	NA	NA	False	NA	NA	NA	122499793	122506237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
tx.16977	chr6	-	2170	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112585.8	2127	8	-38	-5	-22	3	multi-exon	FALSE	canonical	3	36	junction_1	6.10453160549186	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTGTTTGTGGTGT	8686	False	NA	NA	False	NA	NA	NA	122579368	122554754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215
tx.16978	chr6	-	2126	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112586.8	2265	8	35	104	-22	-95	multi-exon	FALSE	canonical	2	5	junction_5	14.3099793921613	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACAAAAC	8686	False	NA	NA	False	NA	NA	NA	122579368	122554854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568220_122573590_122573737_122577016_122577085_122579215
tx.16979	chr6	-	1661	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	20	444	20	-444	multi-exon	FALSE	canonical	3	704	junction_1	0	393	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATATTATATCCAATTG	10000	False	NA	NA	False	NA	NA	NA	122587026	122582805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_122584095_122586654
tx.1698	chr10	-	3279	8	FSM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	9	0	9	0	multi-exon	TRUE	canonical	3	17	junction_5	4.14039335605413	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGACTGAGTCCTTGG	NA	False	NA	NA	False	NA	NA	NA	78427789	78420336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
tx.16980	chr6	+	823	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	10	0	10	0	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGACTCTTTGTAATTTA	690	False	NA	NA	False	NA	NA	NA	122603378	122607231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
tx.16981	chr6	+	2131	5	NNC	ENSMUSG00000012396.13	novel	2011	5	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	1086	junction_1	1448.71328685147	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	122684498	122691592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_122684568_122684675_122684893_122688496_122688763_122689587_122689675_122690100
tx.16982	chr6	+	2183	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	28	0	28	0	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	5692	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	122684554	122691592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
tx.16983	chr6	-	3717	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	227	15	4	2	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	19386	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	NA	False	NA	NA	NA	122719477	122704782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
tx.16984	chr6	+	5300	11	FSM	ENSMUSG00000003154.16	ENSMUST00000003238.14	5283	11	-20	3	-20	-3	multi-exon	TRUE	canonical	3	21	junction_1	4.4	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTCTAGTTTTTATG	2557	False	NA	NA	False	NA	NA	NA	122796852	122822322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_122797930_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
tx.16985	chr6	+	4224	10	ISM	ENSMUSG00000003154.16	ENSMUST00000177927.4	4620	12	7645	-22	1481	-3	3prime_fragment	FALSE	canonical	3	27	junction_5	3.32591767713239	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTCTAGTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	122805114	122822322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
tx.16986	chr6	+	2405	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	72	-1	-3	1	multi-exon	FALSE	canonical	3	520	junction_7	29.158959137102	702	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCATCTTTTAG	860	False	NA	NA	False	NA	NA	NA	122851504	122865901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
tx.16987	chr6	-	3152	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	-19	6	11	-6	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGGACTGACGTGG	NA	False	NA	NA	False	NA	NA	NA	124392015	124373796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
tx.16988	chr6	-	3052	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	2	19	2	-4	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGACTGACGTGGGT	NA	False	NA	NA	False	NA	NA	NA	124392024	124373794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
tx.16989	chr6	-	2426	8	ISM	ENSMUSG00000008153.13	ENSMUST00000112523.8	3703	18	12551	0	-21	0	3prime_fragment	FALSE	canonical	3	22	junction_7	10.5211157940126	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	9232	False	NA	NA	False	NA	NA	NA	124427152	124407717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732
tx.1699	chr10	-	4238	6	FSM	ENSMUSG00000060301.7	ENSMUST00000039271.7	4229	6	-9	0	-9	0	multi-exon	FALSE	canonical	1	4	junction_1	2.33238075793812	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCAGGATATTTTATAA	NA	False	NA	NA	False	NA	NA	NA	78933443	78900207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_78903886_78904467_78904563_78924120_78924214_78928245_78928339_78930264_78930392_78933291
tx.16990	chr6	-	3978	18	FSM	ENSMUSG00000008153.13	ENSMUST00000008297.5	4014	18	36	0	36	0	multi-exon	FALSE	canonical	2	7	junction_17	12.5334155436701	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	8476	False	NA	NA	False	NA	NA	NA	124441717	124407717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732_124426891_124427664_124427719_124428264_124428428_124433835_124433949_124434814_124435097_124435502_124435689_124436116_124436267_124436724_124436934_124438490_124438687_124439068_124439192_124441379
tx.16991	chr6	+	2988	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	7	15	7	-15	multi-exon	TRUE	canonical	2	10	junction_3	3.13687742827162	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGTTGGCAGGATATA	NA	False	NA	NA	False	NA	NA	NA	124470078	124487587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
tx.16992	chr6	+	1949	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	92	240	-53	161	multi-exon	TRUE	canonical	3	738	junction_2	58.4776785524946	846	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGACTGCTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	124640081	124681141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
tx.16993	chr6	-	1013	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	24	-3	-13	3	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	528	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCAGACCTGATTGTT	NA	False	NA	NA	False	NA	NA	NA	124689117	124681340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
tx.16994	chr6	+	1358	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	902.100985200659	1612	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	False	NA	NA	False	NA	NA	NA	124689252	124693913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
tx.16995	chr6	-	2168	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	41	10	-3	3	multi-exon	FALSE	canonical	3	99	junction_10	22.1017847444248	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8771	False	NA	NA	False	NA	NA	NA	124710076	124697679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
tx.16996	chr6	-	2361	15	NIC	ENSMUSG00000004266.16	novel	2219	16	NA	NA	19	3	intron_retention	FALSE	canonical	3	99	junction_9	22.8728740508695	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8749	False	NA	NA	False	NA	NA	NA	124710098	124697679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
tx.16997	chr6	-	546	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	317	0	8	0	multi-exon	FALSE	canonical	3	807	junction_1	71.5	144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTCAGTCATTTGT	9260	False	NA	NA	False	NA	NA	NA	124718020	124716145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124716377_124717481_124717659_124717882
tx.16998	chr6	-	3621	6	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	8691	0	-2208	0	3prime_fragment	FALSE	canonical	3	72	junction_4	10.4307238483242	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	8385	False	NA	NA	False	NA	NA	NA	124724796	124719506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982
tx.16999	chr6	-	4548	10	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	-120	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	27.442869950337	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTGTGACGTGTTT	9095	False	NA	NA	False	NA	NA	NA	124733607	124719508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724950_124726198_124726313_124726424_124726563_124726709_124726885_124733258
tx.17	chr1	+	4262	6	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	58	83	at_least_one_novel_splicesite	TRUE	canonical	2	17	junction_2	49.9623858517585	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	7159211	7242966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7231115_7231288_7233471_7233596_7239738
tx.1700	chr10	-	1629	6	FSM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	20	5	-4	0	multi-exon	FALSE	canonical	3	49	junction_5	6.89927532426414	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	79369610	79362268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
tx.17000	chr6	-	4655	10	FSM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	-222	0	-222	0	multi-exon	FALSE	canonical	3	30	junction_9	22.6083126851416	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	8993	False	NA	NA	False	NA	NA	NA	124733709	124719506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124733258
tx.17001	chr6	-	2672	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	120	3	-3	-3	multi-exon	FALSE	canonical	3	32	junction_11	8.77449346328266	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTTGGCTGAACTAAG	9986	False	NA	NA	False	NA	NA	NA	124746516	124737020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
tx.17002	chr6	+	1221	3	FSM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	-5	3	-5	-3	multi-exon	FALSE	canonical	3	20	junction_1	6.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGTTTCATTATTGTT	NA	False	NA	NA	False	NA	NA	NA	124785863	124787579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_124785994_124786189_124786933_124787231
tx.17003	chr6	-	1339	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	139	123	1	-123	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	1152	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	NA	False	NA	NA	NA	124791120	124787677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
tx.17004	chr6	-	3107	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	-13	-18	-13	-1	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	1692	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	7892	False	NA	NA	False	NA	NA	NA	124806411	124791982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
tx.17005	chr6	+	1069	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	511	396	-18	-227	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	342	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCGGGTCTTGTGTGTA	1326	False	NA	NA	False	NA	NA	NA	124807161	124810268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
tx.17006	chr6	+	1051	5	ISM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	748	406	61	-237	3prime_fragment	FALSE	canonical	0	0	junction_2	388.333941344302	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAAGCTACACCGGGT	1563	False	NA	NA	False	NA	NA	NA	124807398	124810258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
tx.17007	chr6	-	1386	7	ISM	ENSMUSG00000023191.10	ENSMUST00000023958.10	2850	15	7080	0	321	0	3prime_fragment	FALSE	canonical	3	8	junction_4	3.85861230093008	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGTCTGCTCTATCCC	1837	False	NA	NA	False	NA	NA	NA	124827635	124818051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_124818803_124819034_124819176_124821978_124822055_124822164_124822283_124822470_124822622_124822904_124823007_124827588
tx.17008	chr6	-	2816	15	FSM	ENSMUSG00000023191.10	ENSMUST00000023958.10	2850	15	34	0	11	0	multi-exon	FALSE	canonical	1	4	junction_14	4.42396073348629	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGTCTGCTCTATCCC	5517	False	NA	NA	False	NA	NA	NA	124834681	124818051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124818803_124819034_124819176_124821978_124822055_124822164_124822283_124822470_124822622_124822904_124823007_124827588_124827714_124827880_124827949_124828041_124828095_124830013_124830104_124831273_124831411_124831810_124831943_124832043_124832240_124832906_124833060_124834158
tx.17009	chr6	-	2648	5	FSM	ENSMUSG00000038390.12	ENSMUST00000046893.10	2676	5	28	0	28	0	multi-exon	FALSE	canonical	1	2	junction_4	3.56195171219375	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGTTCAGCGTTTGC	NA	False	NA	NA	False	NA	NA	NA	124840852	124835406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124836184_124836454_124836613_124836985_124837176_124837781_124839086_124840633
tx.1701	chr10	-	1584	6	FSM	ENSMUSG00000052151.13	ENSMUST00000163602.9	1609	6	16	9	-4	-4	multi-exon	FALSE	canonical	3	7	junction_5	21.5462293684997	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCATGCATGTTG	NA	False	NA	NA	False	NA	NA	NA	79369610	79362272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369498
tx.17010	chr6	-	802	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	271.262211706681	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	False	NA	NA	False	NA	NA	NA	124892546	124890643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124892506
tx.17011	chr6	-	1977	4	FSM	ENSMUSG00000030122.13	ENSMUST00000181150.2	629	4	-982	-366	-677	-2	multi-exon	FALSE	canonical	3	521	junction_3	94.9139961579253	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCGTCTCCTGCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	124893169	124890645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880
tx.17012	chr6	-	1151	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	521	junction_3	90.7837402842601	388	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	False	NA	NA	False	NA	NA	NA	124894911	124890643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
tx.17013	chr6	+	1508	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-34	1	-7	0	multi-exon	FALSE	canonical	3	3449	junction_8	252.103029533562	2566	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGATTCTGGCTGTACT	NA	False	NA	NA	False	NA	NA	NA	124908360	124913107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
tx.17014	chr6	-	2055	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	14	-44	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_7	630.862642315574	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTCTCTGTCCCTTTT	NA	False	NA	NA	False	NA	NA	NA	124942239	124935419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942196
tx.17015	chr6	-	1776	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	19	3	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_7	623.446346479611	43	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAACTGGGCCTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	124942234	124935775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942114
tx.17016	chr6	-	1706	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	583.751379843669	129	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	124942234	124935778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
tx.17017	chr6	-	1761	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	863	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	124942472	124935778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
tx.17018	chr6	+	2202	6	FSM	ENSMUSG00000030329.12	ENSMUST00000032479.11	2250	6	48	0	48	0	multi-exon	FALSE	canonical	3	20	junction_1	10.6094297678999	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTGCCTGTTTTGCCT	8078	False	NA	NA	False	NA	NA	NA	124973704	124980059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_124973903_124975880_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
tx.17019	chr6	+	2100	5	ISM	ENSMUSG00000030329.12	ENSMUST00000162170.8	2053	6	385	0	183	0	3prime_fragment	FALSE	canonical	3	36	junction_1	6.9462219947249	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTGCCTGTTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	124975784	124980059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
tx.1702	chr10	-	2887	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	38	junction_13	53.1463314291654	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	NA	False	NA	NA	NA	79390716	79376078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
tx.17020	chr6	+	3543	12	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-134	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	63.0599871826111	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	NA	False	NA	NA	NA	124985973	125014829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
tx.17021	chr6	+	3359	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112428.8	3132	11	-226	-1	-133	1	multi-exon	FALSE	canonical	0	0	junction_7	64.1467068523397	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	NA	False	NA	NA	NA	124985974	125014829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
tx.17022	chr6	+	3261	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-126	-2	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	42.3661290288467	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	NA	False	NA	NA	NA	124985981	125014831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
tx.17023	chr6	+	3436	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	-255	-109	-117	-1	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGTGAGCTACTGTGT	NA	False	NA	NA	False	NA	NA	NA	124985990	125014832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
tx.17024	chr6	+	1638	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	-8	-1	-8	0	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7099	False	NA	NA	False	NA	NA	NA	125016790	125026228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
tx.17025	chr6	+	1255	5	FSM	ENSMUSG00000072770.10	ENSMUST00000112414.8	1498	5	242	1	-16	0	multi-exon	FALSE	canonical	3	86	junction_4	12.3490890352285	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTTGTCGTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	125026893	125031156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452
tx.17026	chr6	+	1910	10	FSM	ENSMUSG00000072770.10	ENSMUST00000088294.12	1883	10	-27	0	-15	0	multi-exon	FALSE	canonical	3	10	junction_9	45.7669890199324	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACGTGCTCTGCTTAGT	NA	False	NA	NA	False	NA	NA	NA	125026894	125040230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635_125031769_125037772_125037953_125038048_125038217_125039398_125039483_125039898
tx.17027	chr6	+	2963	2	FSM	ENSMUSG00000107761.2_ENSMUSG00000067714.14	ENSMUST00000088292.7	1393	2	1	-1571	1	14	multi-exon	FALSE	canonical	2	17	junction_1	0	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCACACATTCCATTTA	5039	False	NA	NA	False	NA	NA	NA	125044883	125061006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125044940_125058099
tx.17028	chr6	+	3078	2	FSM	ENSMUSG00000107761.2_ENSMUSG00000067714.14	ENSMUST00000171989.3	1458	2	-50	-1570	-50	13	multi-exon	FALSE	canonical	1	2	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGCACACATTCCATTT	8345	False	NA	NA	False	NA	NA	NA	125048189	125061005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125048362_125058099
tx.17029	chr6	+	6583	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	-46	0	-46	0	multi-exon	FALSE	canonical	3	54	junction_3	116.234542355382	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1743	False	NA	NA	False	NA	NA	NA	125073078	125107554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
tx.1703	chr10	-	3362	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	38	junction_12	52.1999361430005	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	NA	False	NA	NA	NA	79390721	79376078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
tx.17030	chr6	+	2476	14	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	24047	0	442	0	3prime_fragment	FALSE	canonical	3	410	junction_5	46.734045469199	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	78	False	NA	NA	False	NA	NA	NA	125097171	125107554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
tx.17031	chr6	+	2624	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-27	0	-27	0	multi-exon	TRUE	canonical	0	0	junction_7	206.283558885983	820	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5410	False	NA	NA	False	NA	NA	NA	125108844	125121716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
tx.17032	chr6	+	3167	9	NNC	ENSMUSG00000038271.18	novel	3056	8	NA	NA	2	-2	intron_retention	FALSE	canonical	2	8	junction_1	17.2898091371767	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8229	False	NA	NA	False	NA	NA	NA	125122205	125138743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
tx.17033	chr6	-	1407	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	15	-2	15	1	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	NA	False	NA	NA	NA	125142721	125138814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
tx.17034	chr6	-	3489	14	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	16388	0	-784	0	intron_retention	TRUE	canonical	3	496	junction_10	62.5108747935559	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	125152276	125144969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742
tx.17035	chr6	-	4564	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	65	0	-33	0	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	824	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3460	False	NA	NA	False	NA	NA	NA	125168599	125144969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
tx.17036	chr6	+	1556	3	FSM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	-11	-690	-11	690	multi-exon	FALSE	canonical	3	70	junction_1	333	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAGCAAGTGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	125168752	125171211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125169172_125169478_125169590_125170185
tx.17037	chr6	+	688	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	26	2713	-26	-2	multi-exon	FALSE	canonical	3	716	junction_1	10	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTGCCTCGTTCCTA	NA	False	NA	NA	False	NA	NA	NA	125169153	125170519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125169397_125169478_125169590_125170185
tx.17038	chr6	-	2388	7	FSM	ENSMUSG00000038213.8	ENSMUST00000043422.8	2352	7	-30	-6	-30	6	multi-exon	FALSE	canonical	1	1	junction_3	4.61880215351701	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTCTCTCTCCCTG	8483	False	NA	NA	False	NA	NA	NA	125208853	125200889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_125201673_125201826_125201914_125203453_125203760_125205025_125205365_125207107_125207381_125207517_125207761_125208496
tx.17039	chr6	-	1517	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	-15	7	-15	-7	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	638	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGAGGCATTTCCTCT	3446	False	NA	NA	False	NA	NA	NA	125263020	125255243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
tx.1704	chr10	-	2581	14	FSM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	95	0	10	0	multi-exon	FALSE	canonical	3	111	junction_13	38.1023225308973	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	NA	False	NA	NA	NA	79390938	79376078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
tx.17040	chr6	-	2089	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	18	0	18	0	multi-exon	FALSE	canonical	3	11	junction_6	2.62936879248872	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGGTTTTATGTGG	NA	False	NA	NA	False	NA	NA	NA	125290830	125283533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
tx.17041	chr6	+	3488	12	FSM	ENSMUSG00000030340.17	ENSMUST00000081440.14	3499	12	11	0	11	0	multi-exon	FALSE	canonical	2	3	junction_6	2.74539434009845	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGCAGTGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	125298313	125321906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125299338_125307873_125308148_125309055_125309247_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
tx.17042	chr6	+	2168	10	FSM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	-13	1	-13	-1	multi-exon	TRUE	canonical	3	24	junction_1	4.54062594260057	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTGACCCTGGAAAGAGT	3763	False	NA	NA	False	NA	NA	NA	125326672	125339446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
tx.17043	chr6	-	3016	17	FSM	ENSMUSG00000038167.7	ENSMUST00000042647.7	3299	17	292	-9	292	9	multi-exon	FALSE	canonical	0	0	junction_7	3.59198326137525	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTGGTGAACACTGGA	NA	False	NA	NA	False	NA	NA	NA	125357464	125339613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_125339831_125340004_125340683_125341546_125341699_125347343_125347460_125347544_125347678_125349020_125349141_125349440_125349579_125349775_125349926_125350069_125350181_125351491_125351642_125351936_125351988_125352205_125352302_125352686_125352852_125354344_125354501_125355664_125355874_125356717_125356940_125357312
tx.17044	chr6	-	1196	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	32	0	32	0	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	2411	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9998	False	NA	NA	False	NA	NA	NA	125471722	125437228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
tx.17045	chr6	-	1215	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	-3	233	-3	42	multi-exon	FALSE	canonical	3	1115	junction_7	83.3223259396904	723	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAAGTGTCTTTCTTGAC	NA	False	NA	NA	False	NA	NA	NA	126826091	126798916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
tx.17046	chr6	-	1872	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5264	False	NA	NA	False	NA	NA	NA	126916551	126900377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
tx.17047	chr6	+	2186	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	9	306	0	47	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATGTGCTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	126916937	126952624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
tx.17048	chr6	-	2679	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	2	970	2	-970	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	742	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAATGGTTAGGCTGCC	NA	False	NA	NA	False	NA	NA	NA	127086511	127063048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
tx.17049	chr6	+	3451	6	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	18.7125626251457	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	127430587	127471202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_127430786_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
tx.1705	chr10	-	3359	12	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	3	intron_retention	FALSE	canonical	3	111	junction_11	35.7373337672718	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCATGGATTCCAGGG	NA	False	NA	NA	False	NA	NA	NA	79390929	79376075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
tx.17050	chr6	+	3821	9	FSM	ENSMUSG00000037997.13	ENSMUST00000039680.7	3746	9	-97	22	6	-1	multi-exon	FALSE	canonical	3	34	junction_4	10.4403065089106	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	127430588	127471202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
tx.17051	chr6	+	3708	8	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	15.8513502933488	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	127430580	127471202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_127430786_127444994_127445116_127447664_127447794_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
tx.17052	chr6	-	3924	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	-11	-2508	-8	-3	multi-exon	FALSE	canonical	3	88	junction_5	10.9971587239614	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAGACTGTTATTTAGT	6155	False	NA	NA	False	NA	NA	NA	128120534	127938361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
tx.17053	chr6	-	3824	8	FSM	ENSMUSG00000030352.16	ENSMUST00000112173.8	3819	8	-8	3	-8	-3	multi-exon	FALSE	canonical	0	0	junction_7	35.3305094494713	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAGACTGTTATTTAGT	6155	False	NA	NA	False	NA	NA	NA	128120534	127938361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128120476
tx.17054	chr6	-	5676	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	4202	3	intron_retention	TRUE	canonical	1	1	junction_11	28.5309749031753	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCGCTCGTGTGATTT	5634	False	NA	NA	False	NA	NA	NA	128273499	128201247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128273238
tx.17055	chr6	-	5520	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	282	-3893	207	0	multi-exon	FALSE	canonical	3	25	junction_7	24.4991836598692	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATCTGCGCTCGTGTGA	1639	False	NA	NA	False	NA	NA	NA	128277494	128201250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
tx.17056	chr6	-	5669	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	260	-2853	185	-2	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATATCTGCGCTCGTGT	1617	False	NA	NA	False	NA	NA	NA	128277516	128201252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
tx.17057	chr6	-	2849	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	3596	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	28.0695711838689	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCGTGAGAACTTCAACT	5028	False	NA	NA	False	NA	NA	NA	128274105	128204106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128273812
tx.17058	chr6	-	3361	11	FSM	ENSMUSG00000001521.13	ENSMUST00000001562.9	3374	11	13	0	3	0	multi-exon	FALSE	canonical	3	32	junction_5	4.7169905660283	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGCTTTCCCAGAATACC	7504	False	NA	NA	False	NA	NA	NA	128332801	128298123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
tx.17059	chr6	-	3389	12	NNC	ENSMUSG00000001521.13	novel	3374	11	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.9394515496136	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCGCTTTCCCAGA	7512	False	NA	NA	False	NA	NA	NA	128332793	128298128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128324680_128324722_128332700
tx.1706	chr10	-	2158	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	10	-1	intron_retention	FALSE	canonical	3	14	junction_1	63.0349880798134	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	NA	False	NA	NA	NA	79390938	79376080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79377034_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
tx.17060	chr6	-	1299	4	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	21	37	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	133.417473451652	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTTCTGCCTCGAACT	452	False	NA	NA	False	NA	NA	NA	128339853	128334285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_128335157_128336068_128336318_128339020_128339148_128339801
tx.17061	chr6	-	1954	3	ISM	ENSMUSG00000048668.17	ENSMUST00000112152.8	2015	4	-76	320	-20	40	intron_retention	FALSE	canonical	3	55	junction_2	142.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTGCCTCGAACTAAT	454	False	NA	NA	False	NA	NA	NA	128339851	128334282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_128335157_128336068_128336318_128339020
tx.17062	chr6	-	1173	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	-21	-44	-21	39	multi-exon	FALSE	canonical	3	139	junction_2	100.5	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCTGCCTCGAACTAA	453	False	NA	NA	False	NA	NA	NA	128339852	128334283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_128335157_128336068_128336318_128339801
tx.17063	chr6	-	4975	2	FSM	ENSMUSG00000048668.17	ENSMUST00000155573.3	3697	2	-308	-970	-19	-1	multi-exon	FALSE	canonical	3	340	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGCCTGTCTCAGTGGT	455	False	NA	NA	False	NA	NA	NA	128339850	128333963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_128335157_128336068
tx.17064	chr6	-	4308	3	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	-5	0	intron_retention	FALSE	canonical	3	59	junction_2	140.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTGTCTCAGTGGTC	469	False	NA	NA	False	NA	NA	NA	128339836	128333962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_128335157_128336068_128339148_128339801
tx.17065	chr6	-	1623	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	0	-39	0	39	multi-exon	FALSE	canonical	3	41	junction_2	149.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCTGCCTCGAACTAA	474	False	NA	NA	False	NA	NA	NA	128339831	128334283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_128335157_128336068_128336318_128339330
tx.17066	chr6	+	4570	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-220	-260	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	67.396834742689	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	128339709	128352849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349493_128349567_128349739
tx.17067	chr6	+	4558	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-211	-260	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	128339718	128352849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
tx.17068	chr6	+	4603	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-211	260	-211	-260	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	128339718	128352849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
tx.17069	chr6	+	4561	8	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-168	-262	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	60.3665673115475	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGTACACAGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	128339761	128352847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349493_128349567_128349739
tx.1707	chr10	-	2752	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	9	junction_12	62.3803944318041	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	NA	False	NA	NA	NA	79390935	79376078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390907
tx.17070	chr6	+	4075	7	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	2855	262	117	-262	3prime_fragment	FALSE	canonical	3	86	junction_5	42.175888319697	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGTACACAGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	128342784	128352847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
tx.17071	chr6	-	2307	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	12	1	-1	-1	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	329	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGCTCTCCAATCTGGA	NA	False	NA	NA	False	NA	NA	NA	128401882	128386407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
tx.17072	chr6	-	2200	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	17	0	17	0	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	6279	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	9286	False	NA	NA	False	NA	NA	NA	128415623	128407065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
tx.17073	chr6	-	626	7	ISM	ENSMUSG00000030359.15	ENSMUST00000112132.8	4681	36	38804	6	-61	-6	3prime_fragment	FALSE	canonical	3	30	junction_1	17.1464281994822	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTGGGTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	128464879	128460535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_128460690_128461826_128461869_128462520_128462624_128463080_128463150_128463855_128463947_128464365_128464497_128464843
tx.17074	chr6	+	1802	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	3	15	3	-15	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	166	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGACTCAGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	129510125	129519294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
tx.17075	chr6	-	618	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	24	125	24	0	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	131270183	131261475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
tx.17076	chr6	-	1872	10	FSM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	2076	junction_5	391.631661162235	2669	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	4952	False	NA	NA	False	NA	NA	NA	131365420	131341817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
tx.17077	chr6	+	5599	9	FSM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	108	0	108	0	multi-exon	FALSE	canonical	3	28	junction_2	19.2418814048939	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCCAAGTCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	134012770	134247121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
tx.17078	chr6	+	5454	8	FSM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	94	-3	94	0	multi-exon	FALSE	canonical	3	29	junction_1	18.3358687176979	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCCAAGTCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	134012756	134247121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_134013102_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
tx.17079	chr6	+	4478	4	ISM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	212772	0	907	0	3prime_fragment	FALSE	canonical	3	58	junction_1	9.10433352249844	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCCAAGTCTCTGTT	2497	False	NA	NA	False	NA	NA	NA	134225434	134247121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_134225768_134238652_134238796_134239981_134240083_134243220
tx.1708	chr10	-	3044	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-6	0	intron_retention	FALSE	canonical	3	111	junction_12	34.2502027569019	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	NA	False	NA	NA	NA	79390931	79376078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
tx.17080	chr6	+	2204	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	-6	-620	-6	-1	multi-exon	FALSE	canonical	3	57	junction_3	10	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAGTTGCCTGTAAC	NA	False	NA	NA	False	NA	NA	NA	134391384	134415698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
tx.17081	chr6	-	7079	14	ISM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	82494	0	-13126	0	3prime_fragment	FALSE	canonical	3	65	junction_12	11.5855449621934	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGCTTTGTGTGATT	9788	False	NA	NA	False	NA	NA	NA	134461382	134423438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176
tx.17082	chr6	-	9435	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-73	6	-21	-6	multi-exon	FALSE	canonical	3	65	junction_12	12.4923116851794	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGACTGTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	134543949	134423444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
tx.17083	chr6	-	2275	4	FSM	ENSMUSG00000032718.5	ENSMUST00000047443.5	2376	4	100	1	100	-1	multi-exon	FALSE	canonical	3	7	junction_1	3.09120616516523	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCTGGATAGCTTTCA	NA	False	NA	NA	False	NA	NA	NA	134609351	134586170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_134587815_134594279_134594421_134598695_134599013_134609178
tx.17084	chr6	+	1710	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	50	4	29	-4	multi-exon	FALSE	canonical	3	52	junction_1	6.37704215656966	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAACTTGATCTGATTC	NA	False	NA	NA	False	NA	NA	NA	134617952	134688146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
tx.17085	chr6	-	5198	7	FSM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	-95	1	-95	-1	multi-exon	FALSE	canonical	3	50	junction_6	14.7309198626562	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTAAGTGTGAGACGTGGC	NA	False	NA	NA	False	NA	NA	NA	134769683	134692436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
tx.17086	chr6	+	3611	5	FSM	ENSMUSG00000032652.14	ENSMUST00000046303.12	3629	5	15	3	15	-3	multi-exon	FALSE	canonical	3	17	junction_3	2.06155281280883	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTTCAGTTGCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	134807131	134835891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_134807408_134826065_134826264_134828042_134828188_134829240_134829278_134832936
tx.17087	chr6	+	3444	4	FSM	ENSMUSG00000032652.14	ENSMUST00000111937.2	612	4	-63	-2769	-36	-2	multi-exon	FALSE	canonical	0	0	junction_2	9.41629792788369	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTCAGTTGCCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	134807154	134835892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_134807408_134826065_134826264_134829240_134829278_134832936
tx.17088	chr6	-	1575	4	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	8.64098759787715	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATTGATTTACTTAG	NA	False	NA	NA	False	NA	NA	NA	134874874	134846119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_134847407_134864592_134864749_134874124_134874177_134874794
tx.17089	chr6	-	1662	5	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.3664085533089	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACTATTGATTATGGT	NA	False	NA	NA	False	NA	NA	NA	134874866	134846070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_134847407_134863853_134863900_134864592_134864749_134874124_134874177_134874794
tx.1709	chr10	-	3931	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	30	-718	30	117	multi-exon	FALSE	canonical	3	15	junction_3	3.42681419915868	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTTTTAAAAAATTAAAGC	NA	False	NA	NA	False	NA	NA	NA	79473722	79453767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
tx.17090	chr6	-	1524	2	ISM	ENSMUSG00000032641.19	ENSMUST00000165392.8	1643	4	9957	56	-26	8	3prime_fragment	FALSE	canonical	3	94	junction_1	0	29	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTACTTAGTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	134864821	134846111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_134847407_134864592
tx.17091	chr6	-	1590	2	ISM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	10008	6	-18	-6	3prime_fragment	FALSE	canonical	3	36	junction_1	0	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTTCACTATTGAT	NA	False	NA	NA	False	NA	NA	NA	134864813	134846076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_134847446_134864592
tx.17092	chr6	+	438	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	2	5222	2	1	multi-exon	FALSE	canonical	3	145	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	7967	False	NA	NA	False	NA	NA	NA	134906056	134928539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_134906224_134928268
tx.17093	chr6	+	1741	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	19	4	-1	0	multi-exon	TRUE	canonical	3	485	junction_5	30.2182146373304	455	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGTGTGTG	6593	False	NA	NA	False	NA	NA	NA	134988593	135000735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
tx.17094	chr6	+	2081	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	-2	4	-2	-4	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	135042646	135061703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
tx.17095	chr6	+	1854	3	ISM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	12989	10	12989	-10	3prime_fragment	FALSE	canonical	3	128	junction_2	3.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTAAATGTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	135055637	135061697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_135056483_135060440_135060497_135060744
tx.17096	chr6	-	1013	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	39	6	16	-6	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGTGGAGACAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	135145174	135114525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
tx.17097	chr6	+	4152	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	67	2	-65	2	multi-exon	TRUE	canonical	3	64	junction_6	10.7558123821495	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGTGTGTCCTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	135175041	135213238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
tx.17098	chr6	+	4182	13	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-65	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	20.9165006633519	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGTGTGTCCTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	135175041	135213238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_135175100_135186030_135186430_135188802_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
tx.17099	chr6	+	2697	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	24	0	24	0	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	135339952	135360171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
tx.171	chr1	-	6642	41	FSM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	-101	5	-101	-2	multi-exon	TRUE	canonical	3	231	junction_29	35.4925256216009	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAATTGTTTTGTTTTG	7120	False	NA	NA	False	NA	NA	NA	36978709	36831276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
tx.1710	chr10	+	1077	2	FSM	ENSMUSG00000020308.8	ENSMUST00000239401.2	1101	2	25	-1	25	0	multi-exon	FALSE	canonical	3	316	junction_1	0	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	8031	False	NA	NA	False	NA	NA	NA	79505268	79511961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79505618_79511233
tx.17100	chr6	+	4259	15	FSM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	27	3773	-12	-1230	multi-exon	FALSE	canonical	3	154	junction_2	25.3043716477963	162	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGGGTTTTGAAATGTA	7075	False	NA	NA	False	NA	NA	NA	136495826	136584087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
tx.17101	chr6	-	2083	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	-75	2	-75	-2	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGGTCCTGCGTTTA	NA	False	NA	NA	False	NA	NA	NA	136639001	136589069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
tx.17102	chr6	-	2657	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	80	2	-10	-2	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	2846	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCTGTGTTTGTGTAA	2912	False	NA	NA	False	NA	NA	NA	136805151	136790653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
tx.17103	chr6	-	2268	5	FSM	ENSMUSG00000030222.14	ENSMUST00000117919.8	2262	5	-2	-4	-2	-2	multi-exon	FALSE	canonical	3	37	junction_2	7.44983221287567	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGGAATTCTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	137146732	137031824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137146477
tx.17104	chr6	-	4042	21	FSM	ENSMUSG00000015766.15	ENSMUST00000111878.8	3560	21	23	-505	-20	-4	multi-exon	FALSE	canonical	0	0	junction_20	34.6389953664941	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGAATGTTTGCTTGGT	4021	False	NA	NA	False	NA	NA	NA	137626260	137454669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137626049
tx.17105	chr6	-	4122	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	17	428	17	-5	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAGAATGTTTGCTTGG	4015	False	NA	NA	False	NA	NA	NA	137626266	137454670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
tx.17106	chr6	-	4049	21	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	11	-4	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	31.4249502784014	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGAATGTTTGCTTGGT	4009	False	NA	NA	False	NA	NA	NA	137626272	137454669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137626049
tx.17107	chr6	+	2597	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	43	10	43	-10	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	653	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGGAAGTCGCTTGGA	NA	False	NA	NA	False	NA	NA	NA	137712118	137728920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
tx.17108	chr6	+	1741	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	-14	2	-2	-2	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	292	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	137731541	137814890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
tx.17109	chr6	+	4325	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-138	-2697	combination_of_known_junctions	FALSE	canonical	3	61	junction_24	12.1857726696158	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGTGAGAATCTATACG	NA	False	NA	NA	False	NA	NA	NA	140369641	140540139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280
tx.1711	chr10	+	1274	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	-10	2	-10	2	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	854	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	NA	False	NA	NA	NA	79518018	79524230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
tx.17110	chr6	+	4424	26	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-131	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_24	11.9895954894233	67	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	NA	False	NA	NA	NA	140369648	140542836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
tx.17111	chr6	+	4319	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	22.1014076977513	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	NA	False	NA	NA	NA	140369653	140542836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525152_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
tx.17112	chr6	+	4313	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-123	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_24	15.4811152878452	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	NA	False	NA	NA	NA	140369656	140542836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
tx.17113	chr6	+	4415	26	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-119	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	19.6910538062339	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	NA	False	NA	NA	NA	140369660	140542836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525152_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
tx.17114	chr6	+	4614	27	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	24.6783149904776	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	NA	False	NA	NA	NA	140369647	140542836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526072_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
tx.17115	chr6	+	6718	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-40	0	intron_retention	FALSE	canonical	3	61	junction_23	12.0449822425034	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	NA	False	NA	NA	NA	140369845	140542836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
tx.17116	chr6	+	3412	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	102.668687412473	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGATGACTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	140569218	140601206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140599483
tx.17117	chr6	+	3721	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	11	-5	11	5	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAACAATTCAATTT	NA	False	NA	NA	False	NA	NA	NA	140569235	140598557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
tx.17118	chr6	+	4147	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	12	-627	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTATTTTCACATGTGT	NA	False	NA	NA	False	NA	NA	NA	140569236	140599517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
tx.17119	chr6	+	1726	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	2	1103	2	103	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGTTTAATGACTCATTT	NA	False	NA	NA	False	NA	NA	NA	142291381	142307880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
tx.1712	chr10	+	1258	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	3	0	3	0	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	3478	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	NA	False	NA	NA	NA	79540327	79547803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
tx.17120	chr6	-	3367	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	13	9	0	-9	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTCTGGAAAGAGGAGA	6193	False	NA	NA	False	NA	NA	NA	142332800	142307110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
tx.17121	chr6	-	3507	15	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	19	-10	intron_retention	FALSE	canonical	3	14	junction_14	37.9085903785645	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACTTCTGGAAAGAGGAG	6212	False	NA	NA	False	NA	NA	NA	142332781	142307111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332587
tx.17122	chr6	+	2781	6	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	283.233190145505	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	142332947	142349584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_142333096_142338055_142338148_142339653_142339729_142339832_142339901_142341913_142341996_142347268
tx.17123	chr6	+	2814	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	3	1	3	-1	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	407	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGTCAAGTTTATCT	NA	False	NA	NA	False	NA	NA	NA	142332949	142349583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
tx.17124	chr6	+	2543	3	FSM	ENSMUSG00000030245.11	ENSMUST00000146508.2	367	3	-28	-2148	4	0	multi-exon	FALSE	canonical	3	32	junction_1	306	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	142332950	142349584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_142333096_142341913_142341996_142347268
tx.17125	chr6	-	2771	7	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	685	junction_1	70.5275753793429	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	142453667	142435974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_142436331_142438218_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
tx.17126	chr6	-	1288	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	2	-3	2	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	400	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	142453667	142435974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
tx.17127	chr6	+	3540	7	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	50	1051	-18	-1	5prime_fragment	FALSE	canonical	3	691	junction_3	53.4189417092227	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGTGAGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	142702461	142720389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
tx.17128	chr6	+	1719	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	36	5	-32	-5	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	316	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTTTCTGTACTGTAA	NA	False	NA	NA	False	NA	NA	NA	142702447	142721435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
tx.17129	chr6	-	5334	5	FSM	ENSMUSG00000030283.8	ENSMUST00000032421.4	8991	5	10	3647	10	3040	multi-exon	FALSE	canonical	2	8	junction_4	3.11247489949718	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCAGGTAGTGTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	142910168	142770917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_142774997_142813579_142813673_142822373_142822484_142859749_142859895_142909261
tx.1713	chr10	+	3229	8	FSM	ENSMUSG00000020331.10	ENSMUST00000099513.8	3195	8	-29	-5	-29	5	multi-exon	FALSE	canonical	3	76	junction_3	3.18157963590287	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCGTCTCATTACTTT	NA	False	NA	NA	False	NA	NA	NA	79552438	79571947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79553054_79560221_79560646_79561980_79562143_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
tx.17130	chr6	-	4315	26	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	20.7068684257181	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	NA	NA	NA	143045574	142956652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
tx.17131	chr6	-	4183	24	FSM	ENSMUSG00000030279.16	ENSMUST00000204655.3	3526	24	-102	-555	-20	1	multi-exon	FALSE	canonical	3	38	junction_3	28.8381180218075	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	NA	NA	NA	143045595	142956652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
tx.17132	chr6	-	4439	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	21.2642225290113	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	NA	NA	NA	143045834	142956652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
tx.17133	chr6	-	4282	25	FSM	ENSMUSG00000030279.16	ENSMUST00000171349.8	4292	25	3	7	3	1	multi-exon	FALSE	canonical	3	38	junction_3	28.9653768412489	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	NA	NA	NA	143045830	142956652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
tx.17134	chr6	-	3552	22	FSM	ENSMUSG00000030279.16	ENSMUST00000203349.3	4584	22	14	1018	-3	-1018	multi-exon	FALSE	canonical	3	110	junction_6	17.6396276203619	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTATGTGTGTGTTCAC	NA	False	NA	NA	False	NA	NA	NA	143045819	142974056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
tx.17135	chr6	+	6524	9	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	8	-2	intron_retention	FALSE	canonical	2	6	junction_4	112.716943602104	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCATGTGGTTCAT	NA	False	NA	NA	False	NA	NA	NA	143112963	143154270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143138586_143138688_143140957_143141042_143143130_143143292_143148804_143148879_143149109
tx.17136	chr6	+	6423	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	8	2	8	-2	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	315	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCATGTGGTTCAT	NA	False	NA	NA	False	NA	NA	NA	143112963	143154270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
tx.17137	chr6	+	7451	4	ISM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	26031	2	26007	-2	3prime_fragment	FALSE	canonical	3	268	junction_2	5.73488351136175	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCATGTGGTTCAT	NA	False	NA	NA	False	NA	NA	NA	143138986	143154270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_143141042_143143130_143143292_143148804_143148879_143149109
tx.17138	chr6	-	2475	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	86	-5	86	5	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	3249	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8571	False	NA	NA	False	NA	NA	NA	145021824	144944878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
tx.17139	chr6	+	2336	19	FSM	ENSMUSG00000030263.14	ENSMUST00000032396.13	2319	19	-23	6	-23	0	multi-exon	FALSE	canonical	3	14	junction_2	13.9594872380979	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	NA	False	NA	NA	NA	145067441	145120654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_145067833_145083185_145083334_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
tx.1714	chr10	+	3061	7	NIC	ENSMUSG00000020331.10	novel	3195	8	NA	NA	-23	5	intron_retention	FALSE	canonical	1	1	junction_2	29.8142396999972	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCGTCTCATTACTTT	NA	False	NA	NA	False	NA	NA	NA	79552444	79571947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_79553054_79560221_79560646_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
tx.17140	chr6	+	1639	4	FSM	ENSMUSG00000040370.14	ENSMUST00000111724.8	1618	4	-21	0	-2	0	multi-exon	TRUE	canonical	3	14	junction_1	142.199390528464	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	145156879	145162265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_145156979_145160247_145160511_145160909_145160998_145161076
tx.17141	chr6	+	1362	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	12	0	-2	0	multi-exon	FALSE	canonical	3	230	junction_1	45.5	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	145156893	145162265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_145156979_145160909_145160998_145161076
tx.17142	chr6	+	2020	3	FSM	ENSMUSG00000040370.14	ENSMUST00000039729.5	2436	3	19	397	0	3	multi-exon	FALSE	canonical	3	14	junction_1	153.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAGTCTTTATCAAC	NA	False	NA	NA	False	NA	NA	NA	145156900	145162268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_145156979_145160247_145160998_145161076
tx.17143	chr6	+	1478	3	NNC	ENSMUSG00000040370.14	novel	1374	3	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	145	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTAAAGGAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	145156922	145162262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_145157127_145160909_145160998_145161076
tx.17144	chr6	-	4782	6	FSM	ENSMUSG00000030265.15	ENSMUST00000111710.8	1194	6	-52	-3536	10	-10	multi-exon	FALSE	canonical	3	20	junction_2	471.744252747185	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGAAGTGTGTAATT	NA	False	NA	NA	False	NA	NA	NA	145195955	145162434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_145166451_145170799_145170924_145177820_145177981_145179973_145180153_145192420_145192543_145195774
tx.17145	chr6	-	4672	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	1	5	1	-5	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	585	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGTGTGTAATTATGTA	NA	False	NA	NA	False	NA	NA	NA	145195964	145162429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
tx.17146	chr6	+	1091	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	-182	-10	-182	10	multi-exon	FALSE	canonical	3	46	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGACTTGTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	145196072	145197585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_145196516_145196937
tx.17147	chr6	+	1512	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	261	2	261	-2	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	762	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTGCTTCCCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	145561743	145567203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
tx.17148	chr6	+	5446	5	FSM	ENSMUSG00000030259.13	ENSMUST00000111704.8	5446	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	5.44862367942584	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTGTTGCTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	145692473	145766805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_145692693_145754109_145754289_145760778_145761669_145762223_145762369_145762792
tx.17149	chr6	+	5050	3	ISM	ENSMUSG00000030259.13	ENSMUST00000032388.5	1733	4	6670	-3497	-4891	2	3prime_fragment	FALSE	canonical	2	4	junction_2	7	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTTGCTTGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	145760778	145766807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_145761669_145762223_145762369_145762792
tx.1715	chr10	-	3528	19	ISM	ENSMUSG00000020329.13	ENSMUST00000020580.13	3755	21	2870	-6	2862	-1	3prime_fragment	TRUE	canonical	3	126	junction_16	17.2998251614658	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGCGCTCGGCGCCAA	7579	False	NA	NA	False	NA	NA	NA	79579543	79571957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011
tx.17150	chr6	-	2934	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	146479288	146451131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
tx.17151	chr6	-	3014	18	FSM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	43	2	-12	-2	multi-exon	FALSE	canonical	3	82	junction_2	56.6296167637544	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	146479290	146451131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
tx.17152	chr6	+	2702	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	63	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	146479419	146500695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
tx.17153	chr6	+	913	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	1	4	1	-4	multi-exon	FALSE	canonical	0	0	junction_3	170.445005793658	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACGGTGTGCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	146479419	146494359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
tx.17154	chr6	+	2809	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	70	1	8	-1	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	146479426	146500695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
tx.17155	chr6	+	5153	2	ISM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	14181	1	3719	-1	3prime_fragment	FALSE	canonical	3	226	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	146493537	146500695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_146496788_146498792
tx.17156	chr6	-	3193	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	47	1	47	-1	multi-exon	FALSE	canonical	3	689	junction_8	114.912830779186	494	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	NA	NA	NA	146536048	146503850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
tx.17157	chr6	+	779	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	34	1	0	-1	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGTTTTTGTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	146544078	146552099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
tx.17158	chr6	+	4379	12	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-31	-5	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	45.7221215244242	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTGGTGGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	146626461	146680305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_146626546_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
tx.17159	chr6	+	4570	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-28	8	-28	-8	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTGTTGGTGGGGTG	NA	False	NA	NA	False	NA	NA	NA	146626464	146680302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
tx.1716	chr10	-	3753	21	FSM	ENSMUSG00000020329.13	ENSMUST00000020580.13	3755	21	5	-3	-1	0	multi-exon	FALSE	canonical	3	126	junction_16	17.3118456555042	280	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACGCTGCGCTCGGCGC	4714	False	NA	NA	False	NA	NA	NA	79582408	79571960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
tx.17160	chr6	+	4555	14	FSM	ENSMUSG00000001630.14	ENSMUST00000111644.2	2274	14	-33	-2248	8	-8	multi-exon	FALSE	canonical	1	2	junction_13	43.6006622825765	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTGTTGGTGGGGTG	NA	False	NA	NA	False	NA	NA	NA	146626500	146680302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677070
tx.17161	chr6	+	2155	9	ISM	ENSMUSG00000040187.16	ENSMUST00000129788.8	1664	15	14875	-887	-26	4	3prime_fragment	FALSE	canonical	0	0	junction_7	1.49478259288767	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCCTTTCTGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	146721902	146735031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_146722167_146723407_146723649_146724086_146724194_146724591_146724743_146726664_146726727_146728713_146728823_146729596_146729685_146731190_146731300_146734007
tx.17162	chr6	+	4874	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	35	junction_15	73.2858432087318	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7546	False	NA	NA	False	NA	NA	NA	146789991	146933523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
tx.17163	chr6	+	4843	27	FSM	ENSMUSG00000016487.16	ENSMUST00000016631.14	4851	27	7	1	7	1	multi-exon	TRUE	canonical	1	79	junction_5	45.7139938177494	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTATTTGTCATTGT	7546	False	NA	NA	False	NA	NA	NA	146789991	146933522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
tx.17164	chr6	+	5005	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	49	junction_2	70.7910234325529	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7546	False	NA	NA	False	NA	NA	NA	146789991	146933523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
tx.17165	chr6	+	1067	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	5	3090	5	2	multi-exon	FALSE	canonical	3	595	junction_4	51.0230040155958	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTGTCTTACGTCAGG	NA	False	NA	NA	False	NA	NA	NA	146944266	146972399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
tx.17166	chr6	+	6159	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	106	2	106	-2	multi-exon	FALSE	canonical	3	50	junction_2	10.5	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGATGTGTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	146992982	147014274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146993866_147003063_147003258_147009192
tx.17167	chr6	+	2303	13	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	22.1514672200286	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	147377360	147534110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_147377394_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
tx.17168	chr6	+	2386	14	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	34.4726973691547	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGTCATGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	147377366	147534111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_147377394_147409281_147409326_147412321_147412401_147434773_147434862_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
tx.17169	chr6	+	2456	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	3	0	3	0	multi-exon	FALSE	canonical	3	65	junction_1	9.07683253612673	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	147377371	147534110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
tx.1717	chr10	-	1581	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	32	26	-10	1	multi-exon	FALSE	canonical	3	909	junction_4	92.4302946819927	675	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCATGGCTTGGCGTCT	NA	False	NA	NA	False	NA	NA	NA	79602754	79594374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
tx.17170	chr6	+	865	2	Intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGCTGCTGCTGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	147804599	147805676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_+_147805183_147805394
tx.17171	chr6	-	3441	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-964	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	256.271329030074	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	NA	False	NA	NA	NA	148113520	148081540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104624_148106273_148106383_148108030_148108174_148113467
tx.17172	chr6	-	3429	15	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-2	-506	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	326.611866325291	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTACCTCCTGAGATAG	NA	False	NA	NA	False	NA	NA	NA	148113522	148081082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148107597_148107709_148108030_148108174_148113467
tx.17173	chr6	-	3370	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-5	-506	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	344.562702017066	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTACCTCCTGAGATAG	NA	False	NA	NA	False	NA	NA	NA	148113525	148081082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
tx.17174	chr6	-	3309	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	352	513	0	-513	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	343	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAACTGTCTACCTCCT	NA	False	NA	NA	False	NA	NA	NA	148113520	148081089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
tx.17175	chr6	-	3281	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-2	-513	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	251.358274676846	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAACTGTCTACCTCCT	NA	False	NA	NA	False	NA	NA	NA	148113522	148081089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
tx.17176	chr6	-	3236	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-1	-516	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	251.686423065599	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTTAACTGTCTACCT	NA	False	NA	NA	False	NA	NA	NA	148113521	148081092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106383_148108030_148108174_148113467
tx.17177	chr6	-	5353	25	FSM	ENSMUSG00000040029.16	ENSMUST00000048418.14	5360	25	3	4	0	-4	multi-exon	TRUE	canonical	3	188	junction_1	23.3505516827524	132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCTGTCTGCTCTATG	NA	False	NA	NA	False	NA	NA	NA	148732962	148672184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
tx.17178	chr6	-	3642	19	FSM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	55	0	-20	0	multi-exon	FALSE	canonical	3	65	junction_10	9.04805415272352	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	148797680	148743989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
tx.17179	chr6	-	4504	18	ISM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	53	1	-22	0	intron_retention	FALSE	canonical	3	65	junction_10	8.75226120065937	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	148797682	148743990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
tx.1718	chr10	+	1954	5	FSM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	1	0	1	0	multi-exon	FALSE	canonical	2	5	junction_4	2.6809513236909	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTATTTTCTGCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	79613106	79618464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79613232_79614396_79614583_79615798_79616015_79616957_79617186_79617265
tx.17180	chr6	-	3005	18	FSM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	-52	-1	35	0	multi-exon	FALSE	canonical	3	19	junction_10	17.2566621205624	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	148797700	148743989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
tx.17181	chr6	-	3293	19	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	19.154746695993	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCAGTTGTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	148797678	148743992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_148744553_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
tx.17182	chr6	-	2647	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	24	26	0	-4	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	768	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCTCATGACTTT	NA	False	NA	NA	False	NA	NA	NA	148847941	148822558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
tx.17183	chr6	-	7711	21	FSM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	131	1989	-11	-1989	multi-exon	FALSE	canonical	3	13	junction_11	5.03487835006964	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGTACTTTAGTACT	NA	False	NA	NA	False	NA	NA	NA	149003047	148891557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
tx.17184	chr6	-	3303	7	NNC	ENSMUSG00000030313.16	novel	3160	14	NA	NA	11	-5183	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	10.975983884018	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCCTCATTTTTGCTTA	NA	False	NA	NA	False	NA	NA	NA	149003167	148944775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148985152_148985196_148986368_148986435_149002680
tx.17185	chr6	-	1022	7	FSM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	4	431	4	0	multi-exon	FALSE	canonical	3	74	junction_5	14.7723465374402	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGTCCCATATTTATTT	NA	False	NA	NA	False	NA	NA	NA	149090206	149059075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
tx.17187	chr6	+	6136	6	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_3	89.6852273231216	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	NA	False	NA	NA	NA	149210924	149237156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226902_149231283_149232923_149233005_149236089
tx.17188	chr6	+	6190	7	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	89.5693399923583	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	NA	False	NA	NA	NA	149210921	149237156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_149211403_149211819_149211858_149219132_149219207_149226229_149226299_149226902_149231283_149232923_149233005_149236089
tx.17189	chr6	+	6103	6	FSM	ENSMUSG00000032712.17	ENSMUST00000100765.11	5356	6	-19	-728	-1	0	multi-exon	FALSE	canonical	3	26	junction_2	93.1227147370608	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	NA	False	NA	NA	NA	149210952	149237156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_149211403_149211819_149211876_149226229_149226299_149226902_149231283_149232923_149233005_149236089
tx.1719	chr10	+	2536	8	FSM	ENSMUSG00000035863.15	ENSMUST00000105379.3	2519	8	2	-19	2	19	multi-exon	FALSE	canonical	3	161	junction_7	12.869835005206	308	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGAGCCAGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	79629407	79656749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79654874
tx.17190	chr6	+	6202	7	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	80.8489675602327	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	NA	False	NA	NA	NA	149210927	149237156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226229_149226299_149226902_149231283_149232923_149233005_149236089
tx.17191	chr6	+	6035	5	FSM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	26	5	-2	0	multi-exon	FALSE	canonical	3	27	junction_2	95.7405347802069	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	NA	False	NA	NA	NA	149210951	149237156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_149211403_149211819_149211876_149226902_149231283_149232923_149233005_149236089
tx.17192	chr6	+	4308	3	ISM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	17197	5	1167	0	3prime_fragment	FALSE	canonical	3	234	junction_2	22	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	NA	False	NA	NA	NA	149228122	149237156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_149231283_149232923_149233005_149236089
tx.17193	chr6	+	4149	9	FSM	ENSMUSG00000003452.16	ENSMUST00000086829.11	9667	9	22	5496	-10	14	multi-exon	FALSE	canonical	3	5	junction_7	6.68487097856047	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATAGTAAACCTTAGCTC	172	False	NA	NA	False	NA	NA	NA	149310503	149459331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149451847_149451924_149458141
tx.17194	chr6	+	9544	8	FSM	ENSMUSG00000003452.16	ENSMUST00000111513.9	4049	8	-4	-5491	-4	-19	multi-exon	FALSE	canonical	3	6	junction_7	6.57763681898362	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCCCTTTTCTAAAAAC	178	False	NA	NA	False	NA	NA	NA	149310509	149464808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
tx.17195	chr6	+	4071	7	ISM	ENSMUSG00000003452.16	ENSMUST00000003544.14	2928	10	-400	36407	13	-112	5prime_fragment	FALSE	canonical	3	14	junction_4	5.13160143944688	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATTTTTCTTGGATCT	195	False	NA	NA	False	NA	NA	NA	149310526	149421822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403
tx.17196	chr7	-	3412	2	NNC	ENSMUSG00000055452.7	novel	2866	3	NA	NA	1	514	intron_retention	FALSE	canonical	0	0	junction_1	0	24	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACCATAGGACCTGTGG	7185	False	NA	NA	False	NA	NA	NA	3161962	3158505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_3160173_3160217
tx.17197	chr7	-	2842	10	ISM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	6842	0	2144	0	3prime_fragment	FALSE	canonical	3	207	junction_9	19.1659420152867	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	4809	False	NA	NA	False	NA	NA	NA	3212187	3204497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041
tx.17198	chr7	-	3352	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	97	0	-1	0	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9603	False	NA	NA	False	NA	NA	NA	3218932	3204497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
tx.17199	chr7	-	3354	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9598	False	NA	NA	False	NA	NA	NA	3218937	3204497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
tx.172	chr1	-	6637	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-100	-3	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	49.5943482163038	38	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7121	False	NA	NA	False	NA	NA	NA	36978708	36831277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
tx.1720	chr10	+	2427	5	FSM	ENSMUSG00000035852.12	ENSMUST00000046833.5	2414	5	-13	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_1	3.57071421427143	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	NA	False	NA	NA	NA	79658447	79666286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79658521_79661529_79663269_79663711_79663846_79665226_79665266_79665844
tx.17200	chr7	-	2401	7	ISM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	9919	0	5221	0	3prime_fragment	FALSE	canonical	3	233	junction_5	12.1928941054479	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	7886	False	NA	NA	False	NA	NA	NA	3209110	3204497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891
tx.17201	chr7	+	3093	2	Genic_Genomic	ENSMUSG00000077886.3_ENSMUSG00000077903.3_ENSMUSG00000077815.3	novel	84	1	NA	NA	-788	174	multi-exon	FALSE	non_canonical	0	0	junction_1	0	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGCTTTCTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	3266511	3269689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr7_+_3268626_3268710
tx.17202	chr7	+	189	2	Intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTTTCTAGGTTGGTGT	886	False	NA	NA	False	NA	NA	NA	3304590	3309581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_+_3304759_3309560
tx.17203	chr7	+	2777	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	36	0	-5	0	multi-exon	FALSE	canonical	3	335	junction_1	308.5	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	266	False	NA	NA	False	NA	NA	NA	3339094	3347865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3339156_3341727_3341816_3345237
tx.17204	chr7	+	2890	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	-65	-27	-65	0	multi-exon	FALSE	canonical	3	952	junction_1	0	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	2725	False	NA	NA	False	NA	NA	NA	3341553	3347865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3341816_3345237
tx.17205	chr7	+	2971	17	FSM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	-121	-731	2	-1	multi-exon	TRUE	canonical	3	19	junction_9	8.11802585300146	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGATGTTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	3352039	3379614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
tx.17206	chr7	+	3120	18	FSM	ENSMUSG00000078816.11	ENSMUST00000100301.11	3127	18	7	0	7	0	multi-exon	FALSE	canonical	3	18	junction_10	8.64845927034781	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGATGTTTTCTTGTA	NA	False	NA	NA	False	NA	NA	NA	3352044	3379615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
tx.17207	chr7	+	2442	3	FSM	ENSMUSG00000078815.9	ENSMUST00000108647.3	868	3	-1070	-504	-603	0	multi-exon	FALSE	canonical	2	4	junction_2	11.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	NA	NA	NA	3472107	3484183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3473509_3478953_3479029_3483217
tx.17208	chr7	+	2730	5	NNC	ENSMUSG00000078815.9	novel	1977	4	NA	NA	-619	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	7.79422863405995	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTGTGTTGGAGCT	NA	False	NA	NA	False	NA	NA	NA	3472091	3484182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_3473509_3478953_3479029_3480334_3480473_3481159_3481295_3483217
tx.17209	chr7	-	903	6	NNC	ENSMUSG00000053338.10	novel	1535	6	NA	NA	-30989	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.7467330487208	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACTCCTTTTTACGTG	NA	False	NA	NA	False	NA	NA	NA	3582129	3537588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_3537738_3544441_3544508_3545190_3545488_3545940_3546232_3546711_3546748_3582065
tx.1721	chr10	+	2847	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	-15	337	9	2	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	967	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1570	False	NA	NA	False	NA	NA	NA	79690447	79700268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
tx.17210	chr7	+	346	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	4	165	-3	-1	multi-exon	FALSE	canonical	3	2080	junction_1	661.918591839074	300	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTCTTTCGTGGGT	259	False	NA	NA	False	NA	NA	NA	3620375	3623161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
tx.17211	chr7	-	1096	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	NA	False	NA	NA	NA	3632888	3623322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
tx.17212	chr7	-	1126	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	40	0	-5	0	multi-exon	FALSE	canonical	3	150	junction_1	47.3142684610044	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	NA	False	NA	NA	NA	3632888	3623322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
tx.17213	chr7	+	1863	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	24	1257	17	0	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	728	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	2957	False	NA	NA	False	NA	NA	NA	3633007	3644228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
tx.17214	chr7	+	1816	13	ISM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	572	1257	0	0	3prime_fragment	FALSE	canonical	3	845	junction_3	49.0102030193714	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	3505	False	NA	-54	True	NA	NA	NA	3633555	3644228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
tx.17215	chr7	+	2876	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-63	9	-1	0	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	1125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2749	False	NA	NA	False	NA	NA	NA	3648287	3664099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
tx.17216	chr7	-	1851	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	367	4	367	-4	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCAAGCAGGCACCATCAA	9070	False	NA	NA	False	NA	NA	NA	3668472	3663100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
tx.17217	chr7	-	2284	15	FSM	ENSMUSG00000019734.17	ENSMUST00000038743.15	2310	15	25	1	-4	0	multi-exon	FALSE	canonical	3	9	junction_12	9.74077271376478	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCGTTTTGAAACCCC	5423	False	NA	NA	False	NA	NA	NA	3680527	3668789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3673041_3673936_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3680422
tx.17218	chr7	-	1537	3	ISM	ENSMUSG00000035596.15	ENSMUST00000127106.8	1964	6	6146	-4	-1444	0	3prime_fragment	FALSE	canonical	3	185	junction_2	22	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	4595	False	NA	NA	False	NA	NA	NA	3688971	3680787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_3681849_3686807_3686985_3688672
tx.17219	chr7	-	4021	7	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	178	junction_3	25.2762514801718	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7938	False	NA	NA	False	NA	NA	NA	3695977	3680787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_3681849_3686807_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
tx.1722	chr10	+	2925	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	187	-2	9	2	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	1579	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1570	False	NA	NA	False	NA	NA	NA	79690447	79700268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
tx.17220	chr7	-	2561	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	317	0	-220	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7710	False	NA	NA	False	NA	NA	NA	3696205	3680787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
tx.17222	chr7	+	1319	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	6	-6	6	-2	multi-exon	FALSE	canonical	3	1035	junction_3	83.107694522763	346	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2939	False	NA	NA	False	NA	NA	NA	3697527	3704009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
tx.17223	chr7	+	706	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	45	0	0	0	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	2211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1309	False	NA	NA	False	NA	NA	NA	3707036	3709896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
tx.17224	chr7	+	3356	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	10	-854	7	-507	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGATGGGAAGAAA	300	False	NA	NA	False	NA	NA	NA	4122538	4139200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
tx.17225	chr7	+	2968	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	13	1374	-10	1	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATGCTTACATGTGA	306	False	NA	NA	False	NA	NA	NA	4122544	4138333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
tx.17226	chr7	+	2451	11	ISM	ENSMUSG00000030428.17	ENSMUST00000206869.2	1491	13	1036	-1106	-142	-2	3prime_fragment	FALSE	canonical	3	27	junction_10	13.9513440212762	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGTGAGAGGATAAAAA	6285	False	NA	NA	False	NA	NA	NA	4128523	4138344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
tx.17227	chr7	+	3645	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_15	69.6971225294767	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	81	False	NA	NA	False	NA	NA	NA	4140036	4151172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
tx.17228	chr7	-	865	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	157	3	157	-3	multi-exon	FALSE	canonical	3	137	junction_2	5.5	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	NA	False	NA	NA	False	NA	NA	NA	4167702	4154261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4154787_4167091_4167187_4167457
tx.17229	chr7	-	3031	7	FSM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	3	0	3	0	multi-exon	FALSE	canonical	3	20	junction_3	6.10100173924104	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTCATTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	4448645	4428665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448445
tx.1723	chr10	-	3196	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	-24	-222	-1	-5	multi-exon	TRUE	canonical	3	153	junction_9	18.1911617921159	357	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCTTTGGCTGTCACC	1813	False	NA	NA	False	NA	NA	NA	79744756	79730546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
tx.17230	chr7	-	2971	22	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	62.1848243621575	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9938	False	NA	NA	False	NA	NA	NA	4504682	4484518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488202_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
tx.17231	chr7	-	3884	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-6	0	intron_retention	FALSE	canonical	3	232	junction_7	20.8868379607829	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9935	False	NA	NA	False	NA	NA	NA	4504685	4484518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
tx.17232	chr7	-	2995	22	FSM	ENSMUSG00000019254.17	ENSMUST00000013886.9	2983	22	-12	0	-12	0	multi-exon	FALSE	canonical	3	198	junction_16	25.6093980765123	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9929	False	NA	NA	False	NA	NA	NA	4504691	4484518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
tx.17233	chr7	-	3000	22	FSM	ENSMUSG00000019254.17	ENSMUST00000124248.8	2667	22	-333	0	-14	0	multi-exon	FALSE	canonical	3	46	junction_7	53.3921869151542	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9927	False	NA	NA	False	NA	NA	NA	4504693	4484518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
tx.17234	chr7	-	2234	12	FSM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	-10	0	-10	0	multi-exon	FALSE	canonical	2	8	junction_9	6.85022772137618	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTCTCCAGTGCCAAGA	NA	False	NA	NA	False	NA	NA	NA	4535462	4525931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535185_4535275_4535376
tx.17235	chr7	-	3851	24	FSM	ENSMUSG00000052296.8	ENSMUST00000064099.8	3862	24	11	0	11	0	multi-exon	TRUE	canonical	3	244	junction_23	30.5598053220771	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	NA	False	NA	NA	NA	4662007	4634493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
tx.17236	chr7	+	2231	13	ISM	ENSMUSG00000035390.17	ENSMUST00000048248.9	2996	19	8110	4	6795	-4	3prime_fragment	TRUE	canonical	2	3	junction_4	4.15999465811623	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACAGCTGGCTGGCCTTT	NA	False	NA	NA	False	NA	NA	NA	4702036	4718992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_4702106_4707126_4707274_4707682_4707715_4708066_4708238_4709018_4709117_4709333_4709494_4709660_4709722_4710114_4710485_4710896_4710946_4711047_4711172_4711816_4712016_4713420_4713511_4718331
tx.17237	chr7	+	2178	9	FSM	ENSMUSG00000059851.16	ENSMUST00000098853.9	2189	9	11	0	11	0	multi-exon	FALSE	canonical	3	38	junction_1	214.33585648463	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	594	False	NA	NA	False	NA	NA	NA	4743124	4750513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_4743181_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
tx.17238	chr7	+	2545	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	456	junction_1	90.2970155675599	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	616	False	NA	NA	False	NA	NA	NA	4743146	4750513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
tx.17239	chr7	+	2191	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_6	216.601448517779	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	603	False	NA	NA	False	NA	NA	NA	4743133	4750513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
tx.1724	chr10	-	2152	6	ISM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	3067	0	-1252	0	intron_retention	FALSE	canonical	3	161	junction_1	8.30421579681068	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	9428	False	NA	NA	False	NA	NA	NA	79749773	79745885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058
tx.17240	chr7	+	2210	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-33	0	-1	0	multi-exon	FALSE	canonical	3	456	junction_1	88.3026578025826	395	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	620	False	NA	NA	False	NA	NA	NA	4743150	4750513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
tx.17241	chr7	+	4080	7	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	599	junction_4	48.5297732210742	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	621	False	NA	NA	False	NA	NA	NA	4743151	4750513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
tx.17242	chr7	+	3745	8	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	570	junction_2	59.1256013474187	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	625	False	NA	NA	False	NA	NA	NA	4743155	4750513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
tx.17243	chr7	+	4221	6	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	599	junction_3	37.866079807659	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	620	False	NA	NA	False	NA	NA	NA	4743150	4750513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
tx.17244	chr7	-	485	4	FSM	ENSMUSG00000051811.15	ENSMUST00000063324.14	553	4	68	0	-3	0	multi-exon	FALSE	canonical	3	648	junction_1	73.0677007226099	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	4756025	4754790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4754975_4755059_4755161_4755722_4755849_4755951
tx.17245	chr7	-	1132	2	NIC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	803	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	4756025	4754790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_4755849_4755951
tx.17246	chr7	-	675	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	85	615	85	0	multi-exon	FALSE	canonical	3	322	junction_1	0	91	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGCTTGCCTGTCTGGT	247	False	NA	NA	False	NA	NA	NA	4792570	4788170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4788279_4792003
tx.17247	chr7	+	520	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	78	508	-38	-4	multi-exon	FALSE	canonical	3	3938	junction_1	1160.31525888441	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTGTGCTCATTG	2771	False	NA	NA	False	NA	NA	NA	4795950	4797557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
tx.17248	chr7	+	814	4	FSM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	-10	-32	-10	-4	multi-exon	FALSE	canonical	3	6459	junction_1	109.515092820832	301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTGTGCTCATTG	2799	False	NA	NA	False	NA	NA	NA	4795978	4797557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416
tx.17249	chr7	-	995	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	236	7	-3	-7	multi-exon	FALSE	canonical	3	9878	junction_1	292.246851518066	1258	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGTTTCTATGCCTG	NA	False	NA	NA	False	NA	NA	NA	4815353	4811019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
tx.1725	chr10	-	1812	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	85	1	-2	-1	multi-exon	FALSE	canonical	3	145	junction_7	14.1608831731957	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCCCCGTGTTTGT	9767	False	NA	NA	False	NA	NA	NA	79752755	79745886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
tx.17250	chr7	-	6127	5	FSM	ENSMUSG00000053550.14	ENSMUST00000117452.8	5211	5	-916	0	-916	0	multi-exon	FALSE	canonical	3	9	junction_4	3.08220700148449	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGCCTCAAGGTTTTC	4914	False	NA	NA	False	NA	NA	NA	4840089	4828550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4833275_4833757_4833908_4834671_4834723_4837228_4837384_4839042
tx.17251	chr7	-	5466	4	ISM	ENSMUSG00000053550.14	ENSMUST00000119433.4	3481	5	8216	-2475	-306	0	3prime_fragment	FALSE	canonical	3	5	junction_2	2.86744175568088	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGCCTCAAGGTTTTC	5524	False	NA	NA	False	NA	NA	NA	4839479	4828550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_4833275_4833757_4833908_4837228_4837384_4839042
tx.17252	chr7	+	3533	3	FSM	ENSMUSG00000074406.6	ENSMUST00000116354.4	3523	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	14	junction_2	2	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTTTTGTTTTCATG	2961	False	NA	NA	False	NA	NA	NA	4918205	4925001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_4918405_4920408_4920516_4921774
tx.17253	chr7	-	2557	3	FSM	ENSMUSG00000061374.15	ENSMUST00000077385.15	2546	3	-11	0	8	0	multi-exon	FALSE	canonical	3	184	junction_2	130	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	2821	False	NA	NA	False	NA	NA	NA	5017688	5010057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_5012205_5015676_5016022_5017623
tx.17254	chr7	+	1132	2	FSM	ENSMUSG00000051184.8	ENSMUST00000086349.5	1142	2	15	-5	15	4	multi-exon	FALSE	canonical	3	22	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTTCAGTCATGGT	2955	False	NA	NA	False	NA	NA	NA	5018483	5021491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_5018560_5020435
tx.17255	chr7	+	3788	2	ISM	ENSMUSG00000074405.9	ENSMUST00000085427.6	2751	3	-15	461	-15	-109	5prime_fragment	FALSE	canonical	2	2	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCTGGGGTCTGTCCTTG	2933	False	NA	NA	False	NA	NA	NA	5023553	5035676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_5023655_5031989
tx.17256	chr7	+	1079	2	FSM	ENSMUSG00000055633.7	ENSMUST00000069324.7	1096	2	16	1	16	-1	multi-exon	FALSE	canonical	3	32	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGGGTTCTTACTTGC	2935	False	NA	NA	False	NA	NA	NA	5054552	5056721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_5054714_5055803
tx.17257	chr7	+	2125	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	53	5	-49	0	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	1776	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	125	False	NA	NA	False	NA	NA	NA	5065194	5082932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
tx.17258	chr7	+	2573	12	FSM	ENSMUSG00000035203.17	ENSMUST00000098845.10	2565	12	-8	0	-8	0	multi-exon	FALSE	canonical	3	82	junction_1	31.9772646507711	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1300	False	NA	NA	False	NA	NA	NA	5083225	5101177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
tx.17259	chr7	+	2468	11	NIC	ENSMUSG00000035203.17	novel	2334	11	NA	NA	-9	0	combination_of_known_splicesites	TRUE	canonical	3	18	junction_1	44.445584707595	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGGCTCCCTTAAAT	1299	False	NA	NA	False	NA	NA	NA	5083224	5101175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_5083477_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
tx.1726	chr10	+	2993	9	FSM	ENSMUSG00000019564.13	ENSMUST00000019708.12	5361	9	13	2355	13	20	multi-exon	FALSE	canonical	3	22	junction_1	9.40661336507459	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGCCATGGTCGGTCCC	1860	False	NA	NA	False	NA	NA	NA	79762889	79788497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79763091_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
tx.17260	chr7	+	2506	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	43.5085248605051	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1300	False	NA	NA	False	NA	NA	NA	5083225	5101177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_5083477_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
tx.17261	chr7	+	1260	5	ISM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	14763	0	5218	0	3prime_fragment	FALSE	canonical	3	84	junction_2	25.2128439490669	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGGCTCCCTTAAAT	465	False	NA	NA	False	NA	NA	NA	5098054	5101175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
tx.17262	chr7	-	1966	4	NNC	ENSMUSG00000046792.9	novel	1897	3	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	74.9933330370107	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTGTTTCTTGAG	9625	False	NA	NA	False	NA	NA	NA	6158971	6134488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_6136171_6137640_6137708_6146060_6146150_6158843
tx.17263	chr7	-	1904	3	FSM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	-7	0	-7	0	multi-exon	FALSE	canonical	3	46	junction_1	59	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGCCTGTTTCTTGA	9619	False	NA	NA	False	NA	NA	NA	6158977	6134489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_6136171_6146060_6146150_6158843
tx.17264	chr7	-	574	3	FSM	ENSMUSG00000046792.9	ENSMUST00000207628.2	576	3	14	-12	-12	12	multi-exon	FALSE	canonical	3	90	junction_1	37	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGCCGACTTGAGGTT	9614	False	NA	NA	False	NA	NA	NA	6158982	6145272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_6145619_6146060_6146150_6158843
tx.17265	chr7	+	1643	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	1	4	1	-4	multi-exon	FALSE	canonical	3	144	junction_2	66.2740522376593	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTCTGACTCTCCGGT	2968	False	NA	NA	False	NA	NA	NA	6175512	6193416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404
tx.17266	chr7	+	1523	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	12	932	1	-4	multi-exon	FALSE	canonical	3	89	junction_1	90.9004339312464	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTCTGACTCTCCGGT	2968	False	NA	NA	False	NA	NA	NA	6175512	6193416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
tx.17267	chr7	+	2738	4	ISM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	312	5	253	-5	3prime_fragment	FALSE	canonical	3	144	junction_1	65.0350332940297	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGAGTCTGACTCTCCGG	3279	False	NA	NA	False	NA	NA	NA	6175823	6193415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_6177101_6186860_6187202_6191132_6191242_6192404
tx.17268	chr7	+	2753	3	ISM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	10058	4	-1005	-4	3prime_fragment	FALSE	canonical	3	275	junction_2	6.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTCTGACTCTCCGGT	NA	False	NA	NA	False	NA	NA	NA	6185569	6193416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_6187202_6191132_6191242_6192404
tx.17269	chr7	+	1831	5	NIC	ENSMUSG00000058028.15	novel	1980	6	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTGATTGACTTATT	3055	False	NA	NA	False	NA	NA	NA	6225251	6242422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_6225336_6233070_6233538_6234335_6234537_6236813_6236968_6241497
tx.1727	chr10	+	2566	9	FSM	ENSMUSG00000019564.13	ENSMUST00000105376.2	4892	9	-24	2350	-24	-290	multi-exon	FALSE	canonical	3	17	junction_1	10.5089247784919	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCACTGCGTGTTCACAAT	2121	False	NA	NA	False	NA	NA	NA	79763150	79788187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79763235_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
tx.17270	chr7	+	957	9	NIC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-238	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	26.4952825989835	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	2974	False	NA	NA	False	NA	NA	NA	6263296	6284860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_6263544_6266905_6266933_6269287_6269345_6269828_6269847_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
tx.17271	chr7	+	3615	6	NNC	ENSMUSG00000054893.16	novel	3498	5	NA	NA	-39	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.0957706993288	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATATACAAAGAGGTTC	2933	False	NA	NA	False	NA	NA	NA	6289538	6310668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_6289654_6290851_6290970_6292356_6292437_6293534_6293662_6296847_6296941_6307586
tx.17272	chr7	+	3464	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	1	207	1	-6	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGAGGTTCTTTTACA	2973	False	NA	NA	False	NA	NA	NA	6289578	6310675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
tx.17273	chr7	-	2535	5	FSM	ENSMUSG00000030443.17	ENSMUST00000062765.14	2550	5	10	5	3	-5	multi-exon	FALSE	canonical	3	15	junction_1	5.61248608016091	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAGTTGATTATTTTA	NA	False	NA	NA	False	NA	NA	NA	6334274	6318663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_6320779_6326645_6326742_6328451_6328579_6332253_6332316_6334139
tx.17274	chr7	+	2956	5	FSM	ENSMUSG00000109398.3	ENSMUST00000207173.3	2950	5	-18	12	-18	-12	multi-exon	FALSE	canonical	3	12	junction_1	2.6809513236909	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTACAAAACAGCCATGCA	2994	False	NA	NA	False	NA	NA	NA	6346739	6358943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_6346862_6349343_6349432_6351435_6351563_6352716_6352813_6356420
tx.17275	chr7	+	2292	5	FSM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	-150	1741	-150	60	multi-exon	FALSE	canonical	2	8	junction_1	5.71729831301464	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGACTGTATTAAGTTT	2804	False	NA	NA	False	NA	NA	NA	6366128	6382967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_6366347_6374304_6374396_6376125_6376253_6378517_6378614_6381207
tx.17276	chr7	+	2120	5	NNC	ENSMUSG00000055150.16	novel	3883	5	NA	NA	5	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.5841423566947	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATTGACTGTATTAAG	2989	False	NA	NA	False	NA	NA	NA	6366313	6382964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_6366363_6374304_6374396_6376125_6376253_6378517_6378614_6381207
tx.17277	chr7	+	3257	7	FSM	ENSMUSG00000062861.9	ENSMUST00000081022.9	4447	7	29	1161	29	-1161	multi-exon	FALSE	canonical	3	6	junction_3	4.21966296705739	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTCACGGGTTTGTGA	2988	False	NA	NA	False	NA	NA	NA	6386322	6398753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
tx.17278	chr7	-	8688	9	FSM	ENSMUSG00000002265.18	ENSMUST00000051209.11	8694	9	1	5	-1	-5	multi-exon	FALSE	canonical	3	81	junction_3	8.98262211161084	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTCTCAGTCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	6733419	6706895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6733256
tx.17279	chr7	-	3296	5	NIC	ENSMUSG00000108043.3	novel	3226	7	NA	NA	-8	2426	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	4.15331193145904	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTACTTATATCCTT	NA	False	NA	NA	False	NA	NA	NA	6980427	6963907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_6966692_6968979_6969038_6976160_6976339_6978232_6978301_6980219
tx.1728	chr10	+	1481	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-7	81	intron_retention	FALSE	canonical	3	1673	junction_5	35.3120022088808	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2279	False	NA	NA	False	NA	NA	NA	79795978	79803526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802304_79802393_79802561_79803153_79803223_79803304
tx.17280	chr7	+	4119	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-162	1089	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	8.7086164228309	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGTAGTCTGTTTGTG	2992	False	NA	NA	False	NA	NA	NA	6980082	6995175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6988152_6989101_6989202_6991881
tx.17281	chr7	+	3135	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-165	-3	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	11.3419575030063	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAATATAGTGGAG	2989	False	NA	NA	False	NA	NA	NA	6980079	6994083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_6980472_6984231_6984357_6985317_6985477_6987994_6988152_6989101_6989202_6991881
tx.17282	chr7	+	4065	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-165	1086	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	7.34846922834953	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGATGGTAGTCTGTTT	2989	False	NA	NA	False	NA	NA	NA	6980079	6995172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_6980472_6984231_6984357_6987994_6988152_6989101_6989202_6991881
tx.17283	chr7	+	1749	6	NIC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	0	-1	intron_retention	FALSE	canonical	2	56	junction_5	137.89706305792	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTCTTGCTTGAGTG	2914	False	NA	NA	False	NA	NA	NA	6998501	7006086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
tx.17284	chr7	+	1208	7	FSM	ENSMUSG00000070837.7	ENSMUST00000208049.2	1401	7	192	1	-11	-1	multi-exon	FALSE	canonical	2	56	junction_6	128.262751152988	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2903	False	NA	NA	False	NA	NA	NA	6998490	7006089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
tx.17286	chr7	-	2031	5	FSM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	11	0	11	0	multi-exon	FALSE	canonical	3	51	junction_3	2.54950975679639	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAATGACTCTTGAGGT	6247	False	NA	NA	False	NA	NA	NA	7124476	7117688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221
tx.17287	chr7	-	5407	6	Fusion	ENSMUSG00000063535.8_ENSMUSG00000062116.11	novel	2042	5	NA	NA	6004	2584	multi-exon	FALSE	canonical	3	3	junction_5	20.5270553173123	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCATTTGATTAAAGTC	3026	False	NA	NA	False	NA	NA	NA	7133719	7115104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221_7125093_7133543
tx.17288	chr7	-	3021	4	FSM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	9	-2	9	2	multi-exon	TRUE	canonical	3	13	junction_1	4.32049379893857	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTTGCGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	7139745	7133671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_7136168_7137165_7137250_7138290_7138418_7139431
tx.17289	chr7	+	2705	4	FSM	ENSMUSG00000034538.9	ENSMUST00000051435.8	2725	4	11	9	11	-9	multi-exon	FALSE	canonical	3	16	junction_3	9.89949493661167	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATGTATTTTTAATCAA	2980	False	NA	NA	False	NA	NA	NA	7174339	7186552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_7174558_7175135_7175175_7177553_7177681_7184231
tx.1729	chr10	+	1399	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	1	2511	1	81	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	1398	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2287	False	NA	NA	False	NA	NA	NA	79795986	79803526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
tx.17290	chr7	-	2768	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	10	-1	10	1	multi-exon	FALSE	canonical	3	42	junction_2	7.29725975966321	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGACTATTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	7212987	7205114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
tx.17291	chr7	-	4253	12	ISM	ENSMUSG00000000605.10	ENSMUST00000000619.8	4607	13	758	0	-4	0	3prime_fragment	FALSE	canonical	2	21	junction_11	8.98943365042381	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	7301774	7285307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
tx.17292	chr7	-	4158	13	FSM	ENSMUSG00000000605.10	ENSMUST00000210061.2	2445	13	31	-1744	-4	-2	multi-exon	FALSE	canonical	2	9	junction_5	11.9335544672249	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTGTCTTTGGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	7301774	7285309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294726_7294818_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
tx.17294	chr7	-	4101	11	ISM	ENSMUSG00000000605.10	ENSMUST00000210594.2	2539	12	482	-1791	-9	-2	3prime_fragment	FALSE	canonical	3	23	junction_10	8.12465383877984	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTGTCTTTGGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	7301779	7285309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
tx.17295	chr7	-	2539	5	FSM	ENSMUSG00000092574.5	ENSMUST00000210322.2	1179	5	11	-1371	11	1371	multi-exon	FALSE	canonical	3	23	junction_4	6.74536878161602	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTCTCACTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	8096029	8087953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_8089971_8091140_8091228_8091987_8092114_8093259_8093299_8095759
tx.17296	chr7	-	2531	5	FSM	ENSMUSG00000092490.8	ENSMUST00000174729.2	825	5	-183	-1523	16	1093	multi-exon	FALSE	canonical	3	19	junction_4	6.67083203206317	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTCTCACTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	8865834	8857752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865573
tx.17297	chr7	-	4201	4	FSM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	1	-3	1	3	multi-exon	TRUE	canonical	3	55	junction_1	5.43650214343336	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTATTAAGACTTCAT	NA	False	NA	NA	False	NA	NA	NA	10229320	10221152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_10224936_10226205_10226333_10228416_10228456_10229068
tx.17298	chr7	-	2298	4	FSM	ENSMUSG00000110097.2	ENSMUST00000210573.2	2279	4	-21	2	-21	-2	multi-exon	FALSE	canonical	2	8	junction_3	3.29983164553722	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCAGAGTAGTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	10533005	10528170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_10529709_10529792_10529953_10531798_10532271_10532877
tx.17299	chr7	-	1824	4	NNC	ENSMUSG00000110103.2	novel	2015	4	NA	NA	-32	-175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.54247233265651	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTATGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	10803650	10799240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_10800353_10800436_10800597_10802422_10802895_10803570
tx.173	chr1	-	3269	26	NIC	ENSMUSG00000026116.12	novel	591	6	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	61.8143543200121	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTTCTTTTCATTATA	7122	False	NA	NA	False	NA	NA	NA	36978707	36853222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_36853499_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
tx.1730	chr10	-	2146	11	FSM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	77	2	77	-2	multi-exon	FALSE	canonical	3	84	junction_4	19.7891384350103	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	NA	False	NA	NA	NA	79820087	79812953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
tx.17300	chr7	-	2802	4	FSM	ENSMUSG00000095936.4	ENSMUST00000210521.2	1745	4	2	-1059	2	1059	multi-exon	FALSE	canonical	1	3	junction_3	9.89949493661167	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCGGTCTCAGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	11044607	11039245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_11041336_11041419_11041580_11043399_11043872_11044527
tx.17301	chr7	+	1832	4	NNC	ENSMUSG00000110190.2	novel	2277	4	NA	NA	-23	-420	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	3.29983164553722	12	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTTGTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	11248213	11252618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_11248296_11248948_11249421_11251256_11251417_11251500
tx.17302	chr7	+	3500	4	FSM	ENSMUSG00000030386.20	ENSMUST00000123589.8	3509	4	10	-1	10	1	multi-exon	FALSE	canonical	3	113	junction_3	4.98887651569859	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGTAATGTCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	12212241	12217829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861
tx.17303	chr7	+	4116	8	FSM	ENSMUSG00000030386.20	ENSMUST00000151933.2	4069	8	-44	-3	14	3	multi-exon	FALSE	canonical	2	2	junction_5	49.3550237295753	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTACCTAATTCCTGT	NA	False	NA	NA	False	NA	NA	NA	12212245	12229492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12215044_12215109_12223496_12223624_12223875_12223972_12226283
tx.17304	chr7	+	4714	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	27	7	15	-7	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAATTGATGACCTT	NA	False	NA	NA	False	NA	NA	NA	12212246	12230155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
tx.17305	chr7	+	2227	5	ISM	ENSMUSG00000030386.20	ENSMUST00000151933.2	4069	8	-54	12848	4	-1187	5prime_fragment	FALSE	canonical	2	4	junction_4	49.6959505392542	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATTTTGCCTGCATGT	NA	False	NA	NA	False	NA	NA	NA	12212235	12216641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12215044
tx.17306	chr7	-	3704	7	FSM	ENSMUSG00000070822.6	ENSMUST00000211392.2	3709	7	5	0	5	0	multi-exon	FALSE	canonical	3	19	junction_4	11.5854314646552	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTCATTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	12514576	12502018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12506043_12507367_12507518_12508039_12509586_12514498
tx.17307	chr7	-	3844	7	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	13.5082279453014	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTCATTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	12514553	12502018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12506043_12507367_12507518_12507876_12509586_12514498
tx.17308	chr7	-	5640	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	-1	1088	-1	3	multi-exon	FALSE	canonical	3	14	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAGTAAATAAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	12552786	12539996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12545594_12552743
tx.17309	chr7	-	3684	4	NNC	ENSMUSG00000057894.11	novel	2577	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.55777733351102	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGATTTTTTAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	12552780	12538908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_12540520_12541838_12541901_12543619_12545594_12552743
tx.1731	chr10	-	2236	10	FSM	ENSMUSG00000013858.15	ENSMUST00000124536.2	1767	10	-231	-238	59	-2	multi-exon	FALSE	canonical	3	99	junction_9	17.0257611638915	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	NA	False	NA	NA	NA	79820105	79812953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
tx.17310	chr7	+	3358	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	236	-3	-40	3	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	471	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACTATAGCGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	12568923	12584507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
tx.17311	chr7	+	2243	4	FSM	ENSMUSG00000060397.7	ENSMUST00000144578.2	3834	4	10	1581	10	0	multi-exon	FALSE	canonical	2	3	junction_3	3.55902608401044	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTTGTGTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	12615113	12625768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12615288_12618569_12618697_12618949_12619046_12623922
tx.17312	chr7	+	2892	2	NIC	ENSMUSG00000054715.12	novel	1826	3	NA	NA	-8	-29	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACCACATGGGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	12631733	12642981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_12631805_12640160
tx.17313	chr7	+	2918	2	FSM	ENSMUSG00000054715.12	ENSMUST00000119989.3	2087	2	-29	-802	2	-38	multi-exon	FALSE	canonical	3	22	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAAAATCCTACCACAT	NA	False	NA	NA	False	NA	NA	NA	12631764	12642972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12631871_12640160
tx.17314	chr7	+	2960	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	6	29	1	-29	multi-exon	FALSE	canonical	3	21	junction_1	0	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACCACATGGGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	12631768	12642981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12631908_12640160
tx.17315	chr7	+	3437	3	FSM	ENSMUSG00000054715.12	ENSMUST00000055528.11	2620	3	27	-844	1	0	multi-exon	FALSE	canonical	2	3	junction_1	9	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGCTTCTCCAACATC	NA	False	NA	NA	False	NA	NA	NA	12631768	12643010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12631871_12637527_12638013_12640160
tx.17316	chr7	+	3052	2	ISM	ENSMUSG00000054715.12	ENSMUST00000055528.11	2620	3	6040	-815	5988	-29	3prime_fragment	FALSE	canonical	3	21	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACCACATGGGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	12637781	12642981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_12638013_12640160
tx.17317	chr7	+	733	6	FSM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	28	0	0	0	multi-exon	FALSE	canonical	3	14799	junction_5	1601.25238485381	4122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	NA	False	NA	NA	NA	12656244	12660613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
tx.17318	chr7	+	4285	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	-8	38	-8	-15	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAGATGATATTAAAT	NA	False	NA	NA	False	NA	NA	NA	12699756	12707711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
tx.17319	chr7	+	3580	5	FSM	ENSMUSG00000033961.17	ENSMUST00000108535.8	2594	5	-2	-984	-2	40	multi-exon	FALSE	canonical	3	25	junction_1	5.2618912949623	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTTTCAACACT	NA	False	NA	NA	False	NA	NA	NA	12711772	12718307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772
tx.1732	chr10	+	1771	7	FSM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	17	672	17	-672	multi-exon	FALSE	canonical	3	82	junction_2	7.8616509433805	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTACATTCCTGAGTT	1786	False	NA	NA	False	NA	NA	NA	79824434	79831224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
tx.17320	chr7	+	3389	6	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	1	43	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	4.88262224629348	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTTTCAACACTGTC	NA	False	NA	NA	False	NA	NA	NA	12711775	12718310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
tx.17321	chr7	+	4463	3	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	-1	26	intron_retention	FALSE	canonical	3	27	junction_2	4.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTCGTCTAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	12711773	12718293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_12713907_12715772_12715855_12716045
tx.17322	chr7	+	3481	5	ISM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	-1	1326	-1	48	intron_retention	FALSE	canonical	2	6	junction_1	12.051970793194	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCAACACTGTCCATTT	NA	False	NA	NA	False	NA	NA	NA	12711773	12718315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772
tx.17323	chr7	-	2240	3	NNC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	163	44	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	92	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTCGTAGGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	12743564	12739593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_12740308_12740950_12742257_12743344
tx.17324	chr7	-	2208	3	FSM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	8	-45	0	45	multi-exon	FALSE	canonical	3	66	junction_2	65	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	12743749	12739592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12740308_12740950_12742257_12743562
tx.17325	chr7	-	2271	3	NIC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	19	45	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	12743942	12739592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_12740308_12740950_12742257_12743692
tx.17326	chr7	+	3205	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	40	0	40	0	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	7022	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	12758118	12764962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
tx.17327	chr7	+	2502	16	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	985	0	-621	0	3prime_fragment	FALSE	canonical	3	3307	junction_6	392.926320489393	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	12759063	12764962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
tx.17328	chr7	-	895	6	FSM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	54	0	-14	0	multi-exon	FALSE	canonical	3	2610	junction_5	213.695671458268	709	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	6989	False	NA	NA	False	NA	NA	NA	12768680	12765940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
tx.17329	chr7	-	1451	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	21	0	21	0	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	1211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGCCTCTTCCTTC	8464	False	NA	NA	False	NA	NA	NA	12772179	12769164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
tx.1733	chr10	+	6751	47	NIC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	11.8955758960178	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	5979	False	NA	NA	False	NA	NA	NA	79832296	79851406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
tx.17330	chr7	-	3363	4	NIC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	5.43650214343336	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTGAGTTCGTGGCT	1930	False	NA	NA	False	NA	NA	NA	13012361	12992891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_12995567_13003260_13003574_13011071_13011355_13012269
tx.17331	chr7	+	3083	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	9	-1	0	1	multi-exon	TRUE	canonical	0	0	junction_1	267.791767474326	1683	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2629	False	NA	NA	False	NA	NA	NA	13012760	13045351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
tx.17332	chr7	+	5807	16	FSM	ENSMUSG00000033847.16	ENSMUST00000108528.9	3390	16	-2417	0	-1405	0	multi-exon	FALSE	canonical	0	0	junction_1	1.78138522878498	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATTGAATTATTTATT	NA	False	NA	NA	False	NA	NA	NA	13057174	13094593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_13059703_13063572_13063688_13063895_13064033_13069117_13069308_13071661_13071783_13073525_13073667_13074537_13074592_13076315_13076358_13077297_13077442_13077815_13077966_13078361_13078458_13079921_13080077_13082138_13082311_13090100_13090252_13090950_13091078_13093109
tx.17333	chr7	-	1362	3	FSM	ENSMUSG00000041583.9	ENSMUST00000108513.5	1344	3	-21	3	-21	-3	multi-exon	FALSE	canonical	3	46	junction_1	9.5	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCAGTTTTTACC	NA	False	NA	NA	False	NA	NA	NA	15573624	15567168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_15567876_15568304_15568891_15573555
tx.17334	chr7	+	2133	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	-45	2	2	-2	multi-exon	FALSE	canonical	3	257	junction_2	3	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGATCTGTGCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	15630050	15634221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_15630183_15631328_15631478_15632369
tx.17335	chr7	+	932	5	FSM	ENSMUSG00000074365.14	ENSMUST00000098801.9	934	5	2	0	2	0	multi-exon	FALSE	canonical	3	145	junction_3	373.339992500134	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGCTTTAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	15630050	15637945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_15630183_15631328_15631478_15632369_15632542_15636774_15636933_15637624
tx.17336	chr7	+	612	3	FSM	ENSMUSG00000074365.14	ENSMUST00000171280.3	571	3	-41	0	-41	0	multi-exon	FALSE	canonical	3	864	junction_1	106.5	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGCTTTAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	15635529	15637945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_15635663_15636774_15636933_15637624
tx.17337	chr7	-	679	6	FSM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	52	5	52	-5	multi-exon	FALSE	canonical	3	1985	junction_1	35.4028247460566	495	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGGAGATGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	15656275	15651137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15654373_15654399_15656176
tx.17338	chr7	-	1525	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	-1	1652	-1	3	multi-exon	FALSE	canonical	3	1334	junction_1	195.89089579548	1564	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGGTCTTGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	15680000	15671759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
tx.17339	chr7	+	1525	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	145	847	-5	389	multi-exon	TRUE	canonical	3	1130	junction_8	65.9754499795189	1057	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	15832527	15851053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
tx.1734	chr10	+	3908	23	FSM	ENSMUSG00000035697.15	ENSMUST00000099501.10	3948	23	36	4	36	0	multi-exon	TRUE	canonical	1	1	junction_1	23.4611072568839	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCGATCTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	79852522	79867302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79852753_79853613_79853939_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
tx.17340	chr7	+	1638	12	FSM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	-8	0	-8	0	multi-exon	FALSE	canonical	3	76	junction_5	5.62609034427847	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTCTGGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	15853811	15861441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
tx.17341	chr7	+	3223	8	ISM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	1037	0	481	0	3prime_fragment	FALSE	canonical	3	76	junction_1	6.94291593155592	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTCTGGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	15854856	15861441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
tx.17342	chr7	-	3965	15	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	3041	4	intron_retention	FALSE	canonical	3	60	junction_11	12.051970793194	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTTATTTATTTA	6948	False	NA	NA	False	NA	NA	NA	15952877	15931067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
tx.17343	chr7	-	3893	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	-14	-78	-9	4	multi-exon	FALSE	canonical	3	51	junction_16	13.8562655051785	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTTATTTATTTA	8428	False	NA	NA	False	NA	NA	NA	15955971	15931067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
tx.17344	chr7	-	3836	16	ISM	ENSMUSG00000006019.16	ENSMUST00000094816.3	4073	17	3041	-71	3041	-6	3prime_fragment	FALSE	canonical	3	60	junction_12	12.4347184215093	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATTAATTAATTGTTT	6948	False	NA	NA	False	NA	NA	NA	15952877	15931077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
tx.17345	chr7	-	2167	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	68.79796336603	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAACTGTGCTGCTAG	NA	False	NA	NA	False	NA	NA	NA	16020701	16007966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_16008342_16009180_16009301_16009662_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
tx.17346	chr7	-	2162	14	FSM	ENSMUSG00000041375.20	ENSMUST00000118976.10	2175	14	16	-3	0	0	multi-exon	FALSE	canonical	3	30	junction_1	66.2157134678708	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAACTGTGCTGCTAG	NA	False	NA	NA	False	NA	NA	NA	16020699	16007966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
tx.17347	chr7	-	1938	12	ISM	ENSMUSG00000041375.20	ENSMUST00000118976.10	2175	14	14	1424	-2	-5	5prime_fragment	FALSE	canonical	3	130	junction_1	29.1238449918179	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCACTGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	16020701	16009393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
tx.17348	chr7	-	1938	12	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	37.3980155923805	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCACTGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	16020698	16009393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
tx.17349	chr7	+	1851	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	-37	0	-37	0	multi-exon	FALSE	canonical	3	119	junction_1	49.2769948578667	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	16043503	16052130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
tx.1735	chr10	+	3507	22	FSM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	-7	-1	-7	0	multi-exon	FALSE	canonical	3	46	junction_7	15.7468637773006	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	813	False	NA	NA	False	NA	NA	NA	79855479	79867303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
tx.17350	chr7	+	1764	4	NIC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-114	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	92.4589999224882	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	NA	False	NA	NA	NA	16044265	16052128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_16044464_16046050_16046340_16047551_16047743_16051042
tx.17351	chr7	-	1919	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	-44	0	-23	0	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	3494	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	16121754	16060974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
tx.17352	chr7	+	7116	13	NIC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1294	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	29.3317944672103	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTCTAGTCTCAT	3187	False	NA	NA	False	NA	NA	NA	16133540	16171620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
tx.17353	chr7	+	7356	14	NIC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1285	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	34.2757699018835	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTCTAGTCTCAT	3196	False	NA	NA	False	NA	NA	NA	16133549	16171620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
tx.17354	chr7	+	5824	13	NIC	ENSMUSG00000059273.10	novel	6039	14	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	31.572997429238	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTCTAGTCTCAT	4744	False	NA	NA	False	NA	NA	NA	16135097	16171620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_16135232_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
tx.17355	chr7	+	6082	14	FSM	ENSMUSG00000059273.10	ENSMUST00000098789.5	6039	14	-43	0	-43	0	multi-exon	FALSE	canonical	0	0	junction_9	35.8403758961691	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTCTAGTCTCAT	4735	False	NA	NA	False	NA	NA	NA	16135088	16171620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16135232_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
tx.17356	chr7	+	5353	10	ISM	ENSMUSG00000059273.10	ENSMUST00000098789.5	6039	14	20179	2	6541	-2	3prime_fragment	FALSE	canonical	0	0	junction_5	39.1836448622554	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGTGAGTCTAGTCTC	NA	False	NA	NA	False	NA	NA	NA	16155310	16171618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
tx.17357	chr7	+	4828	7	ISM	ENSMUSG00000059273.10	ENSMUST00000209289.2	5853	14	21231	0	7593	0	3prime_fragment	FALSE	canonical	0	0	junction_3	33.9803864996658	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGTCTAGTCTCATC	NA	False	NA	NA	False	NA	NA	NA	16156362	16171621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
tx.17358	chr7	+	3884	2	ISM	ENSMUSG00000059273.10	ENSMUST00000098789.5	6039	14	31605	2	17967	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGTGAGTCTAGTCTC	6534	False	NA	NA	False	NA	NA	NA	16166736	16171618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_16166948_16167945
tx.17359	chr7	+	656	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	163	-4	-21	0	multi-exon	FALSE	canonical	3	728	junction_1	16.5	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCTGAGTGATAGCTC	NA	False	NA	NA	False	NA	NA	NA	16186866	16189419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16187096_16188045_16188139_16189085
tx.1736	chr10	-	1074	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	74	0	-11	0	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	1016	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5589	False	NA	NA	False	NA	NA	NA	79875555	79871782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
tx.17360	chr7	+	712	3	FSM	ENSMUSG00000019158.10	ENSMUST00000209536.2	699	3	-17	4	-17	0	multi-exon	FALSE	canonical	3	42	junction_1	359.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAGACTCTGAGTGATA	NA	False	NA	NA	False	NA	NA	NA	16186870	16189415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16187096_16187981_16188139_16189085
tx.17361	chr7	-	5906	6	ISM	ENSMUSG00000058230.13	ENSMUST00000171937.2	6251	8	51009	-1215	51009	1215	3prime_fragment	TRUE	canonical	3	90	junction_2	8	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGCTGTCAGCTTAT	NA	False	NA	NA	False	NA	NA	NA	16297853	16228961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382
tx.17362	chr7	-	7515	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	313	1319	257	1214	multi-exon	FALSE	canonical	3	71	junction_6	12.7366487830285	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGCTGCTGTCAGCTTA	NA	False	NA	NA	False	NA	NA	NA	16348605	16228962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
tx.17363	chr7	+	800	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	36	0	2	0	multi-exon	FALSE	canonical	3	580	junction_2	14.0423466699836	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	False	NA	NA	False	NA	NA	NA	16472370	16483219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
tx.17364	chr7	+	2704	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	29	31	1	-31	multi-exon	FALSE	canonical	3	1461	junction_5	112.684293492927	2706	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	NA	False	NA	NA	NA	16515293	16532168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
tx.17365	chr7	+	4650	4	ISM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	8963	31	-2724	-31	3prime_fragment	FALSE	canonical	3	1624	junction_2	79.984720763128	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	NA	False	NA	NA	NA	16524227	16532168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_16527806_16529682_16529878_16529948_16530084_16531426
tx.17366	chr7	-	2807	3	FSM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	-3	23	-3	-23	multi-exon	FALSE	canonical	3	12	junction_2	10.5	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTTTGTTTCCTTGCT	NA	False	NA	NA	False	NA	NA	NA	16550660	16543193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_16545902_16548988_16549052_16550624
tx.17367	chr7	+	3104	18	FSM	ENSMUSG00000030374.16	ENSMUST00000019220.16	3535	18	429	2	1	2	multi-exon	FALSE	canonical	3	94	junction_8	104.795467294144	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	NA	False	NA	NA	NA	16550242	16574854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
tx.17368	chr7	+	3083	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	1	-2	1	2	multi-exon	FALSE	canonical	3	350	junction_8	55.9168933502007	687	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	NA	False	NA	NA	NA	16550242	16574854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
tx.17369	chr7	+	3243	19	FSM	ENSMUSG00000041187.17	ENSMUST00000168093.9	3251	19	1	7	1	-7	multi-exon	FALSE	canonical	2	2	junction_2	2.9465401347058	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCACCCACTGGCCATG	NA	False	NA	NA	False	NA	NA	NA	16576827	16604290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16576959_16577406_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
tx.1737	chr10	+	815	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	144	0	144	0	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	1371	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	799	False	NA	NA	False	NA	NA	NA	79889465	79892273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
tx.17370	chr7	+	2823	4	FSM	ENSMUSG00000078794.5	ENSMUST00000108493.3	2989	4	-2	168	-2	-168	multi-exon	FALSE	canonical	3	26	junction_3	6.53197264742181	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGATTCTTGTTCTGC	NA	False	NA	NA	False	NA	NA	NA	16609239	16621219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_16609599_16617051_16617149_16617282_16617436_16619005
tx.17371	chr7	-	2182	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	108	0	108	0	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	1109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	NA	False	NA	NA	NA	16657931	16649303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
tx.17372	chr7	-	2254	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-21	-12	intron_retention	FALSE	canonical	3	1050	junction_5	58.5383959607102	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCTCAAACCCACCTC	NA	False	NA	NA	False	NA	NA	NA	16761755	16738576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
tx.17373	chr7	-	1974	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	86	12	-21	-12	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	1335	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCTCAAACCCACCTC	NA	False	NA	NA	False	NA	NA	NA	16761755	16738576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
tx.17374	chr7	-	1939	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-21	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	317.791718565618	36	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCTCAAACCCACCTC	NA	False	NA	NA	False	NA	NA	NA	16761755	16738576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756374_16756582_16761617
tx.17375	chr7	-	6411	15	FSM	ENSMUSG00000004328.16	ENSMUST00000108492.9	6402	15	-8	-1	-8	1	multi-exon	TRUE	canonical	0	0	junction_10	3.50218590632322	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGTGTTGACTCATCT	NA	False	NA	NA	False	NA	NA	NA	16796360	16765430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_16769891_16771058_16771141_16773482_16773595_16774893_16775166_16776513_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16788606_16788753_16790184_16790376_16796280
tx.17376	chr7	+	723	3	FSM	ENSMUSG00000030413.8	ENSMUST00000032573.8	694	3	-27	-2	-27	2	multi-exon	FALSE	canonical	3	241	junction_2	21	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCCTCCGGTGAATCTC	NA	False	NA	NA	False	NA	NA	NA	18618577	18624368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18618899_18623202_18623325_18624088
tx.17377	chr7	-	1992	14	NIC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	82	junction_7	38.5657050949086	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2778	False	NA	NA	False	NA	NA	NA	18644322	18624807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
tx.17378	chr7	-	2011	14	FSM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	11	0	-6	0	multi-exon	FALSE	canonical	3	126	junction_7	27.4902887640592	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2771	False	NA	NA	False	NA	NA	NA	18644329	18624807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
tx.17379	chr7	+	2149	3	FSM	ENSMUSG00000048481.16	ENSMUST00000059331.9	2173	3	26	-2	26	0	multi-exon	FALSE	canonical	2	7	junction_2	1	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGGCTCTGAGACAGGC	6990	False	NA	NA	False	NA	NA	NA	18725195	18735691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18725280_18725756_18726546_18734415
tx.1738	chr10	+	1605	6	FSM	ENSMUSG00000075706.12	ENSMUST00000183037.3	735	6	-825	-45	152	0	multi-exon	FALSE	canonical	3	7423	junction_4	813.086120899871	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	807	False	NA	NA	False	NA	NA	NA	79889473	79892273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
tx.17380	chr7	-	2143	2	FSM	ENSMUSG00000040891.7	ENSMUST00000036018.6	2037	2	-106	0	-106	0	multi-exon	FALSE	canonical	3	25	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGTGTCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	18757569	18747208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_18749056_18757273
tx.17381	chr7	+	4084	27	FSM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	32	0	-11	0	multi-exon	FALSE	canonical	3	103	junction_24	19.2187654844311	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGATGTGCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	18758333	18788542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
tx.17382	chr7	+	4725	22	ISM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	34	2861	-9	3	5prime_fragment	FALSE	canonical	3	129	junction_5	14.4793229693516	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCAGTGGTGTTTGGG	NA	False	NA	NA	False	NA	NA	NA	18758335	18785681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
tx.17383	chr7	+	2508	5	FSM	ENSMUSG00000030410.17	ENSMUST00000032570.14	2494	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	219	junction_3	47.1858029496161	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	18810137	18816701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18815843_18815919_18816200
tx.17384	chr7	+	2431	4	FSM	ENSMUSG00000030410.17	ENSMUST00000108479.2	2388	4	-43	0	-12	0	multi-exon	FALSE	canonical	3	165	junction_3	77.0757203447796	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	18810139	18816701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18816200
tx.17385	chr7	+	3404	3	ISM	ENSMUSG00000030410.17	ENSMUST00000032570.14	2494	5	-11	0	-11	0	intron_retention	FALSE	canonical	3	302	junction_1	22	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	18810140	18816701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_18810627_18811979_18812163_18813966
tx.17386	chr7	+	3858	4	FSM	ENSMUSG00000030410.17	ENSMUST00000146429.2	2080	4	-1777	-1	-11	0	multi-exon	FALSE	canonical	3	219	junction_2	52.8288641642889	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	18810140	18816701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18812163_18813966_18815227_18815843_18815919_18816200
tx.17387	chr7	+	3787	3	NIC	ENSMUSG00000030410.17	novel	2388	4	NA	NA	-14	1	intron_retention	FALSE	canonical	3	165	junction_2	90.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTTCTGTTCCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	18810137	18816702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_18812163_18813966_18815227_18816200
tx.17388	chr7	+	3031	3	FSM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	-230	206	-230	-206	multi-exon	FALSE	canonical	2	8	junction_2	0.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAGCTATTGAGGGTA	NA	False	NA	NA	False	NA	NA	NA	18828288	18832268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18829344_18830156_18830945_18831080
tx.17389	chr7	+	2944	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	12	1917	12	443	multi-exon	FALSE	canonical	3	58	junction_1	0	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCTGGCGTGTGTG	9349	False	NA	NA	False	NA	NA	NA	18853795	18872180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18853862_18869302
tx.1739	chr10	-	4661	32	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-14	-8	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	18.0258226152743	196	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGCTGTGGCCTA	NA	False	NA	NA	False	NA	NA	NA	79938546	79892833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
tx.17390	chr7	-	2730	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	47	-67	47	67	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTTCCAAGATTCACCC	7251	False	NA	NA	False	NA	NA	NA	18883169	18873559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
tx.17391	chr7	+	510	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	97	813	-40	-813	multi-exon	FALSE	canonical	3	3249	junction_1	86	685	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCCAGTGGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	18883743	18886654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18883820_18885142_18885323_18886400
tx.17392	chr7	+	1832	2	NIC	ENSMUSG00000040824.4	novel	1420	3	NA	NA	-42	-816	intron_retention	FALSE	canonical	3	3421	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTTTTCCAGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	18883741	18886651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_18885323_18886400
tx.17393	chr7	+	2536	21	ISM	ENSMUSG00000040811.16	ENSMUST00000117338.8	2765	22	2917	-223	-1832	1	3prime_fragment	FALSE	canonical	3	14	junction_1	46.9870992933167	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	18913262	18940405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_18913371_18913450_18913575_18913675_18913781_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
tx.17394	chr7	+	2251	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	2	2	2	1	multi-exon	FALSE	canonical	3	61	junction_1	24.7224719088515	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	18915096	18940405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
tx.17395	chr7	+	2337	19	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	28.4707452191426	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	18915142	18940405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_18915281_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
tx.17396	chr7	+	2047	2	FSM	ENSMUSG00000044317.8	ENSMUST00000060225.6	2882	2	1	834	1	-834	multi-exon	FALSE	canonical	2	8	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTCTCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	18946463	18957265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18946560_18955314
tx.17397	chr7	+	3338	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	27	1	-22	-1	multi-exon	FALSE	canonical	3	147	junction_1	0	221	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTCAATTTTA	3260	False	NA	NA	False	NA	NA	NA	18962285	18981792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18962510_18978678
tx.17398	chr7	-	2231	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	-19	3	-19	-3	multi-exon	TRUE	canonical	3	1236	junction_9	117.461666323765	1750	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCTGGAGTACTTT	NA	False	NA	NA	False	NA	NA	NA	19005761	18990856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
tx.17399	chr7	-	2151	4	ISM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	216	0	216	0	intron_retention	FALSE	canonical	3	13	junction_1	6.12825877028341	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTCTTCGTTGTTGT	9771	False	NA	NA	False	NA	NA	NA	19013773	19010729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194
tx.174	chr1	+	1262	8	NIC	ENSMUSG00000050122.20	novel	4717	27	NA	NA	-17	4	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	16.9440857179231	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTTCTCCCTCAGAGG	NA	False	NA	NA	False	NA	NA	NA	37139731	37180421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_37139908_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
tx.1740	chr10	-	4366	29	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-1	-12	combination_of_known_junctions	FALSE	canonical	3	19	junction_28	32.0305179732182	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTACTTTGTGCTGTGG	5693	False	NA	NA	False	NA	NA	NA	79911235	79892837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79911061
tx.17400	chr7	+	1954	10	FSM	ENSMUSG00000030401.17	ENSMUST00000032559.17	1990	10	33	3	22	-3	multi-exon	FALSE	canonical	3	51	junction_4	11.5662343819316	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGCATTCTGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	19016581	19030082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
tx.17401	chr7	+	1058	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	317	0	-6	0	multi-exon	TRUE	canonical	3	315	junction_9	39.5851948880006	137	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1028	False	NA	NA	False	NA	NA	NA	19079019	19090449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
tx.17402	chr7	-	2195	4	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	13	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.490987293304	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTACTTTTGATACATG	2171	False	NA	NA	False	NA	NA	NA	19093393	19089931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_19090087_19090124_19091942_19093014_19093157_19093312
tx.17403	chr7	-	1879	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	14	346	14	-346	multi-exon	FALSE	canonical	3	228	junction_1	10	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGTTCTGCCTCTTAT	2172	False	NA	NA	False	NA	NA	NA	19093392	19090284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19091942_19093014_19093157_19093312
tx.17404	chr7	-	2917	2	FSM	ENSMUSG00000047649.10	ENSMUST00000176333.2	489	2	36	-2464	34	-361	multi-exon	FALSE	canonical	3	248	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCTGTTTGGAATGG	2192	False	NA	NA	False	NA	NA	NA	19093372	19090299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19093157_19093312
tx.17405	chr7	+	3151	13	FSM	ENSMUSG00000040734.15	ENSMUST00000047621.14	3130	13	-18	-3	-18	3	multi-exon	FALSE	canonical	3	31	junction_4	11.000946928939	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATCATTTTGATTCTG	396	False	NA	NA	False	NA	NA	NA	19095122	19112461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
tx.17406	chr7	+	3569	23	FSM	ENSMUSG00000030400.18	ENSMUST00000062831.16	3578	23	9	0	1	0	multi-exon	TRUE	canonical	3	88	junction_1	20.1272809394744	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	NA	False	NA	NA	NA	19115943	19129619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
tx.17407	chr7	+	3764	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	3	0	intron_retention	FALSE	canonical	3	111	junction_10	16.2438894843024	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	NA	False	NA	NA	NA	19115967	19129619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
tx.17408	chr7	-	2093	12	ISM	ENSMUSG00000040714.15	ENSMUST00000108459.9	1849	13	18	-3	18	0	intron_retention	FALSE	canonical	3	22	junction_10	3.28532927265321	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCGATCTGCTCAATT	6350	False	NA	NA	False	NA	NA	NA	19133828	19128361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208
tx.17409	chr7	-	1824	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108458.10	1823	13	0	-1	0	1	multi-exon	TRUE	canonical	2	9	junction_12	5.99247212944893	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCGATCTGCTCAATTC	2149	False	NA	NA	False	NA	NA	NA	19138029	19128360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
tx.1741	chr10	-	2407	18	ISM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	1660	5424	-12	0	internal_fragment	FALSE	canonical	3	133	junction_10	12.4322384803871	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGGTCTCCATTCCTC	NA	False	NA	NA	False	NA	NA	NA	79938544	79898249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
tx.17410	chr7	-	3636	18	FSM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	0	330	0	-3	multi-exon	TRUE	canonical	2	4	junction_2	31.7309188501163	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGACGTACAGAGTCCG	NA	False	NA	NA	False	NA	NA	NA	19192746	19159029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19160337_19161998_19162044_19163030_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
tx.17411	chr7	-	3563	17	FSM	ENSMUSG00000030397.12	ENSMUST00000085715.7	3886	17	-6	329	-6	-2	multi-exon	FALSE	canonical	3	72	junction_16	12.0219525764328	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGACGTACAGAGTCCGT	NA	False	NA	NA	False	NA	NA	NA	19192752	19159028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
tx.17412	chr7	+	4086	12	NNC	ENSMUSG00000011263.17	novel	4016	12	NA	NA	-164	0	intron_retention	TRUE	canonical	1	4	junction_6	3.17010832257504	16	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAGATTCCCACTGCTC	NA	False	NA	NA	False	NA	NA	NA	19197091	19230685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_19197279_19203392_19203930_19207852_19208448_19212233_19212346_19213712_19213815_19213904_19214006_19215170_19215282_19218523_19218660_19222976_19223100_19223532_19223689_19225580_19225703_19228881
tx.17413	chr7	+	3640	11	ISM	ENSMUSG00000011263.17	ENSMUST00000137613.9	4016	12	6398	0	6398	0	3prime_fragment	FALSE	canonical	1	4	junction_5	3.13209195267316	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATTCCCACTGCTCTT	1275	False	NA	NA	False	NA	NA	NA	19203653	19230687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_19203930_19207852_19208448_19212233_19212346_19213712_19213815_19213904_19214006_19215170_19215282_19218523_19218660_19222976_19223100_19223532_19223689_19225580_19225703_19228881
tx.17414	chr7	-	1853	2	FSM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	13	1322	13	-1322	multi-exon	FALSE	canonical	3	24	junction_1	0	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCCTCTTGATTCTAAC	NA	False	NA	NA	False	NA	NA	NA	19242279	19239732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19241536_19242229
tx.17415	chr7	+	701	5	FSM	ENSMUSG00000002043.18	ENSMUST00000147114.2	719	5	16	2	0	2	multi-exon	FALSE	canonical	3	104	junction_1	197.958802532244	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTGCAGTGCTTATCA	521	False	NA	NA	False	NA	NA	NA	19242650	19250068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_19242758_19248346_19248465_19248931_19249016_19249128_19249223_19249770
tx.17416	chr7	+	770	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	12	3	-2	1	multi-exon	FALSE	canonical	3	436	junction_1	62.2009646227452	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTGCAGTGCTTATC	519	False	NA	NA	False	NA	NA	NA	19242648	19250067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
tx.17417	chr7	-	2986	13	FSM	ENSMUSG00000051403.10	ENSMUST00000058444.10	3816	13	830	0	830	0	multi-exon	FALSE	canonical	3	79	junction_4	17.5752351019521	188	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8344	False	NA	NA	False	NA	NA	NA	19296171	19264724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
tx.17418	chr7	-	816	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	-50	-3	-8	0	multi-exon	FALSE	canonical	3	225	junction_1	0	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	2894	False	NA	NA	False	NA	NA	NA	19307318	19298870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19299602_19307233
tx.17419	chr7	+	1512	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	17	1	17	-1	multi-exon	FALSE	canonical	3	235	junction_1	5.5	280	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGGACTTTCTTGGGG	744	False	NA	NA	False	NA	NA	NA	19311228	19314580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_19311554_19311741_19311886_19313537
tx.1742	chr10	+	2571	10	FSM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	-8	3	-8	-3	multi-exon	FALSE	canonical	3	36	junction_1	19.2898617266195	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCACCTGGGCTGTTCT	2639	False	NA	NA	False	NA	NA	NA	79951628	79966513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
tx.17420	chr7	-	2391	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	13	junction_13	58.629500104883	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCACATGCTGTCCCCT	NA	False	NA	NA	False	NA	NA	NA	19338392	19314966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
tx.17421	chr7	-	2413	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-7	-1	intron_retention	TRUE	canonical	3	190	junction_19	27.1360581324836	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	NA	False	NA	NA	NA	19338395	19314963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
tx.17422	chr7	-	2157	21	FSM	ENSMUSG00000061028.8	ENSMUST00000086041.7	2180	21	17	6	-6	0	multi-exon	FALSE	canonical	3	161	junction_6	32.5501152071694	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACATGCTGTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	19338394	19314965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
tx.17423	chr7	-	2198	11	FSM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	1	1	1	-1	multi-exon	FALSE	canonical	3	48	junction_10	60.3088716525189	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGGTCTTCTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	19363362	19340142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19363115
tx.17424	chr7	-	2326	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_10	54.7927002437368	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGGTCTTCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	19362376	19340143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362000
tx.17425	chr7	-	2466	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	7	1670	4	8	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	2315	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCACCTCCTCTGCCT	5155	False	NA	NA	False	NA	NA	NA	19398951	19367165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
tx.17426	chr7	-	412	4	FSM	ENSMUSG00000040564.15	ENSMUST00000045035.12	432	4	20	0	-2	0	multi-exon	FALSE	canonical	3	965	junction_3	145.90027035235	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGAAGTGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	19426565	19423405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19423562_19425812_19425961_19426335_19426412_19426533
tx.17427	chr7	-	1111	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	136	161	0	2	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	5159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	19432977	19430194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
tx.17428	chr7	-	1577	10	FSM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	-5	5	-5	-5	multi-exon	TRUE	canonical	3	2342	junction_9	200.868177398407	2198	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTGGGAGGCCTCGG	9876	False	NA	NA	False	NA	NA	NA	19449368	19435242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
tx.17429	chr7	-	2660	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	55	20	15	-20	multi-exon	FALSE	canonical	3	309	junction_4	306.654528745297	448	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTTGTGTTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	19483443	19450588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
tx.1743	chr10	-	3943	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	12	2	intron_retention	FALSE	canonical	2	8	junction_5	10.4774890970011	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTCTGGGTTTTCTC	9088	False	NA	NA	False	NA	NA	NA	79975185	79966382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972496_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
tx.17430	chr7	-	1939	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	16	0	16	0	multi-exon	FALSE	canonical	3	559	junction_1	167.41517255016	588	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGGGTGTTTTGTAATC	NA	False	NA	NA	False	NA	NA	NA	19483442	19458085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
tx.17431	chr7	-	2396	15	FSM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	26	7	26	-7	multi-exon	TRUE	canonical	3	510	junction_11	49.5145824737624	818	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCCTACCGCCAGGTT	3938	False	NA	NA	False	NA	NA	NA	19504446	19490062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
tx.17432	chr7	-	1666	12	FSM	ENSMUSG00000040525.14	ENSMUST00000043822.8	1662	12	-4	0	-4	0	multi-exon	FALSE	canonical	2	11	junction_1	3.71283233757493	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCCGTGTGTGACAGAG	NA	False	NA	NA	False	NA	NA	NA	19530738	19513642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19513722_19514697_19514773_19514894_19515002_19518727_19518806_19519162_19519325_19520107_19520240_19522893_19522982_19524324_19524463_19526032_19526155_19526433_19526591_19526733_19526881_19530357
tx.17433	chr7	-	4531	3	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	9	0	intron_retention	TRUE	canonical	3	703	junction_2	19	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5738	False	NA	NA	False	NA	NA	NA	19556686	19542386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_19546439_19553971_19554126_19556361
tx.17434	chr7	-	1856	9	FSM	ENSMUSG00000053175.18	ENSMUST00000120537.8	1850	9	-6	0	-6	0	multi-exon	FALSE	canonical	3	615	junction_1	42.6314144733669	793	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5723	False	NA	NA	False	NA	NA	NA	19556701	19542386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
tx.17435	chr7	-	2169	7	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	678	junction_4	25.3223660470783	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5731	False	NA	NA	False	NA	NA	NA	19556693	19542386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
tx.17436	chr7	-	2351	6	ISM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	3988	0	-2410	0	3prime_fragment	FALSE	canonical	3	90	junction_4	11.805083650699	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCCGAGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	19651097	19637502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798
tx.17437	chr7	-	2871	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	34	0	-13	0	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCCGAGCCTTTG	9965	False	NA	NA	False	NA	NA	NA	19655051	19637502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
tx.17438	chr7	+	3452	10	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-72	2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	7.83786315046595	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTTTCCTCAATGAAT	NA	False	NA	NA	False	NA	NA	NA	19725317	19796867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_19725614_19741948_19742019_19753060_19753368_19757035_19758615_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
tx.17439	chr7	+	3452	10	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-46	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	8.7658146325849	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTTTCCTCAATGAAT	NA	False	NA	NA	False	NA	NA	NA	19725343	19796867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_19725614_19741948_19742019_19753034_19753368_19757035_19758615_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
tx.1744	chr10	-	3188	11	FSM	ENSMUSG00000035640.19	ENSMUST00000147778.9	3175	11	-13	0	-13	0	multi-exon	FALSE	canonical	3	10	junction_6	10.1788997440784	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9061	False	NA	NA	False	NA	NA	NA	79975212	79966384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
tx.17440	chr7	+	3581	11	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-37	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	7.39256383131049	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGTTTCCTCAATGAA	NA	False	NA	NA	False	NA	NA	NA	19725352	19796866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_19725614_19741948_19742019_19753060_19753368_19757035_19758615_19760440_19760606_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
tx.17441	chr7	+	3893	5	FSM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	0	8	0	7	multi-exon	FALSE	canonical	3	55	junction_2	15.0499169432924	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGATGTCCCACTTGT	NA	False	NA	NA	False	NA	NA	NA	23781348	23807130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800872_23800994_23803829
tx.17442	chr7	+	3815	4	NIC	ENSMUSG00000057101.9	novel	3901	5	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	41.2660743091573	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCCCACTTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	23781349	23807134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_23781664_23797245_23797321_23800872_23800994_23803829
tx.17443	chr7	+	5514	6	Fusion	ENSMUSG00000047603.10_ENSMUSG00000068962.8	novel	1332	5	NA	NA	-2	2012	multi-exon	TRUE	canonical	0	0	junction_3	18.7018715640975	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCTATTACAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	23833596	23884625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_+_23833913_23834682_23834741_23836470_23836598_23875533_23875592_23877174_23877302_23879797
tx.17444	chr7	+	3442	4	FSM	ENSMUSG00000047603.10	ENSMUST00000056549.9	3373	4	-67	-2	1	2	multi-exon	FALSE	canonical	3	32	junction_3	6.18241233033047	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTCATCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	23833599	23842668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_23833913_23834682_23834741_23836470_23836598_23839724
tx.17445	chr7	-	4454	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	-9	1957	-9	973	multi-exon	TRUE	canonical	3	37	junction_1	10.4986771653491	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGCTCTCTCTGGTTT	NA	False	NA	NA	False	NA	NA	NA	23907583	23895328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
tx.17446	chr7	-	5016	4	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-138	2232	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	2.49443825784929	30	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTTGTCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	23937123	23924764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_23929266_23933775_23933903_23936042_23936101_23936793
tx.17447	chr7	+	2710	5	NNC	ENSMUSG00000055305.16	novel	2324	3	NA	NA	-1683	-11	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	4.43705983732471	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAGAAAAGGATTCTGA	NA	False	NA	NA	False	NA	NA	NA	23968161	23976241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_23968442_23968718_23968881_23971037_23971096_23972672_23972800_23974158
tx.17448	chr7	+	2543	4	FSM	ENSMUSG00000055305.16	ENSMUST00000108438.10	3508	4	-6	971	-6	-4	multi-exon	FALSE	canonical	3	7	junction_2	2.44948974278318	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATTCTGATTTAATT	NA	False	NA	NA	False	NA	NA	NA	23969838	23976248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_23970107_23971037_23971096_23972672_23972800_23974158
tx.17449	chr7	-	2026	6	NIC	ENSMUSG00000050605.18	novel	2480	7	NA	NA	6	-8	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	15.3310143173894	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGTATCATGTGGATTC	NA	False	NA	NA	False	NA	NA	NA	23998820	23990471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23997698_23997801_23998617
tx.1745	chr10	-	3217	11	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	10.5380263806844	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9059	False	NA	NA	False	NA	NA	NA	79975214	79966384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972496_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
tx.17450	chr7	-	2335	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	137	8	99	-8	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGTATCATGTGGATTC	NA	False	NA	NA	False	NA	NA	NA	23998963	23990471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
tx.17451	chr7	-	3199	6	FSM	ENSMUSG00000074282.11_ENSMUSG00000050605.18	ENSMUST00000108436.8	2599	6	-60	-540	1	540	multi-exon	FALSE	canonical	1	2	junction_2	3.8262252939418	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGCAACAGCTTCCATCA	NA	False	NA	NA	False	NA	NA	NA	24016090	24000588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24003299_24008495_24008623_24010889_24010929_24011806_24011921_24013774_24013837_24015943
tx.17452	chr7	-	3163	5	FSM	ENSMUSG00000074282.11_ENSMUSG00000050605.18	ENSMUST00000032673.15	2529	5	-1	-633	-1	541	multi-exon	FALSE	canonical	2	9	junction_1	0.866025403784439	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACAGCTTCCATCAT	NA	False	NA	NA	False	NA	NA	NA	24016092	24000587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24003299_24008495_24008623_24011806_24011921_24013774_24013837_24015943
tx.17453	chr7	+	2231	14	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_3	34.9034170348701	36	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGGGTTTGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	24099043	24122201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105121_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
tx.17454	chr7	+	2232	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	7	3	7	-3	multi-exon	FALSE	canonical	3	128	junction_3	14.7828462881374	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGGGTTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	24099050	24122200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
tx.17455	chr7	+	1508	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	-1	-1	-1	0	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTAGGTCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	24161907	24175393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
tx.17456	chr7	+	2180	9	FSM	ENSMUSG00000054793.9	ENSMUST00000068023.8	2161	9	-19	0	-19	0	multi-exon	FALSE	canonical	3	44	junction_8	7.9912061042123	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGGTGGCTGTGTGTCT	6382	False	NA	NA	False	NA	NA	NA	24181428	24203964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24181588_24198580_24198728_24198937_24199091_24199348_24199484_24199900_24200066_24200156_24200248_24200989_24201163_24202090_24202220_24202936
tx.17457	chr7	+	1442	4	NNC	ENSMUSG00000064264.15	novel	1159	3	NA	NA	-28	-14	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	89.1777251709566	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCTCCGCATATGTT	NA	False	NA	NA	False	NA	NA	NA	24206466	24215091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214461
tx.17458	chr7	+	1186	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	-41	14	-10	-14	multi-exon	FALSE	canonical	3	276	junction_2	107	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCTCCGCATATGTT	NA	False	NA	NA	False	NA	NA	NA	24206513	24215091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24206862_24209970_24210179_24214461
tx.17459	chr7	+	1148	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	19	15	-10	-13	multi-exon	FALSE	canonical	3	407	junction_2	41.5	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	NA	False	NA	NA	NA	24206513	24215092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24206862_24209970_24210179_24214500
tx.1746	chr10	+	901	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	25	5	25	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	675	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTCTGTTTCTAAC	4470	False	NA	NA	False	NA	NA	NA	79978173	79981647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
tx.17460	chr7	+	6117	3	FSM	ENSMUSG00000041037.9	ENSMUST00000049020.9	6083	3	-34	0	-34	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTGTCTTCTATTTA	NA	False	NA	NA	False	NA	NA	NA	24230079	24238025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24230330_24230808_24231341_24232690
tx.17461	chr7	+	2109	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	44	2	-4	1	multi-exon	FALSE	canonical	3	337	junction_4	31.1527862919194	508	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	NA	False	NA	NA	False	NA	NA	NA	24246618	24272861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
tx.17462	chr7	+	973	7	ISM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	6330	0	6330	0	3prime_fragment	FALSE	canonical	3	79	junction_1	14.7384606462894	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTCTGCTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	24293297	24308350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
tx.17463	chr7	-	1069	6	FSM	ENSMUSG00000062773.7	ENSMUST00000078001.7	1059	6	-10	0	-10	0	multi-exon	FALSE	canonical	2	2	junction_5	1.72046505340853	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCGCGTGCATGCATG	992	False	NA	NA	False	NA	NA	NA	24371485	24367431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24367828_24367933_24368066_24369138_24369325_24369757_24369899_24370003_24370109_24371376
tx.17464	chr7	+	512	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	262	0	0	0	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	2423	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	NA	False	NA	NA	NA	24584057	24589231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
tx.17465	chr7	+	274	3	FSM	ENSMUSG00000040952.17	ENSMUST00000130335.8	395	3	123	-2	123	0	multi-exon	FALSE	canonical	3	8873	junction_2	3389.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	214	False	NA	NA	False	NA	NA	NA	24587737	24589231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24587891_24588331_24588387_24589165
tx.17466	chr7	+	3229	29	FSM	ENSMUSG00000040940.19	ENSMUST00000047873.16	3212	29	-14	-3	-14	0	multi-exon	FALSE	canonical	3	35	junction_1	58.1352662647508	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	8540	False	NA	NA	False	NA	NA	NA	24602447	24626017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
tx.17467	chr7	+	3259	29	FSM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	-45	0	4	0	multi-exon	FALSE	canonical	3	251	junction_1	33.6220742600902	434	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9879	False	NA	NA	False	NA	NA	NA	24603786	24626017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
tx.17468	chr7	-	819	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	80	0	-36	0	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTCCTGGTATTTTC	4575	False	NA	NA	False	NA	NA	NA	24672099	24669176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
tx.17469	chr7	-	3594	23	FSM	ENSMUSG00000040907.16	ENSMUST00000080882.11	3621	23	27	0	12	0	multi-exon	FALSE	canonical	2	6	junction_18	15.2038490124504	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTGTGTTATGCTT	NA	False	NA	NA	False	NA	NA	NA	24705356	24677591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700584_24705179
tx.1747	chr10	+	1260	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	61	0	-1	0	multi-exon	FALSE	canonical	3	285	junction_6	33.736314097555	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	6190	False	NA	NA	False	NA	NA	NA	80003672	80007489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
tx.17470	chr7	+	3087	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	42	1011	-37	1	multi-exon	FALSE	canonical	3	224	junction_1	0	395	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	4997	False	NA	NA	False	NA	NA	NA	24776671	24781906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24776812_24778959
tx.17471	chr7	+	3174	2	FSM	ENSMUSG00000045252.12	ENSMUST00000053410.11	3145	2	-28	-1	-28	1	multi-exon	FALSE	canonical	3	92	junction_1	0	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	5006	False	NA	NA	False	NA	NA	NA	24776680	24781906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24776908_24778959
tx.17472	chr7	-	1710	5	FSM	ENSMUSG00000054499.10	ENSMUST00000206750.2	4594	5	-39	2923	-27	2	multi-exon	FALSE	canonical	3	21	junction_4	29.7237278954037	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTCTCCGGTACTTT	NA	False	NA	NA	False	NA	NA	NA	24919323	24902262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918457_24919211
tx.17473	chr7	-	1846	5	NIC	ENSMUSG00000054499.10	novel	1942	6	NA	NA	-28	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	23.466731770743	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGCTCTCCGGTACTT	NA	False	NA	NA	False	NA	NA	NA	24919324	24902263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919211
tx.17474	chr7	-	4170	9	ISM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	1366	2	1366	-2	intron_retention	FALSE	canonical	3	363	junction_8	12.941575445053	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGGCTGCCTG	NA	False	NA	NA	False	NA	NA	NA	24935910	24927684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252
tx.17475	chr7	-	2150	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	57	-1	intron_retention	FALSE	canonical	2	7	junction_2	115.505151400273	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	NA	False	NA	NA	NA	24937219	24927683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_24928356_24928889_24928946_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
tx.17476	chr7	-	2205	11	FSM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	54	1	54	-1	multi-exon	FALSE	canonical	3	276	junction_10	34.6278789416851	371	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	NA	False	NA	NA	NA	24937222	24927683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
tx.17477	chr7	-	3835	10	ISM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	61	1	61	-1	intron_retention	FALSE	canonical	3	363	junction_8	12.2090838474908	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	NA	False	NA	NA	NA	24937215	24927683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977
tx.17478	chr7	-	2025	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	42	-1	intron_retention	FALSE	canonical	3	64	junction_10	96.9278597721006	35	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	NA	False	NA	NA	NA	24937234	24927683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936994
tx.17479	chr7	+	5632	20	NIC	ENSMUSG00000005442.14	novel	6096	20	NA	NA	-164	0	intron_retention	FALSE	canonical	3	38	junction_9	26.7689405334862	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	326	False	NA	NA	False	NA	NA	NA	24982070	24993570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
tx.1748	chr10	+	1477	6	FSM	ENSMUSG00000045193.14	ENSMUST00000140774.2	912	6	-47	-518	-1	0	multi-exon	FALSE	canonical	3	335	junction_5	19.6936538001459	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	6190	False	NA	NA	False	NA	NA	NA	80003672	80007489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
tx.17480	chr7	+	5635	20	FSM	ENSMUSG00000005442.14	ENSMUST00000163320.8	6096	20	460	1	-171	-1	multi-exon	FALSE	canonical	3	37	junction_13	27.4875947844843	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	319	False	NA	NA	False	NA	NA	NA	24982063	24993569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
tx.17481	chr7	+	4011	11	ISM	ENSMUSG00000005442.14	ENSMUST00000167379.2	4732	15	2200	-2	-1240	-1	3prime_fragment	FALSE	canonical	3	45	junction_7	26.8841961010554	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	5703	False	NA	NA	False	NA	NA	NA	24987447	24993569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
tx.17482	chr7	+	3966	11	NIC	ENSMUSG00000005442.14	novel	6096	20	NA	NA	-1191	0	intron_retention	FALSE	canonical	3	51	junction_7	26.0660698993922	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	5752	False	NA	NA	False	NA	NA	NA	24987496	24993570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
tx.17483	chr7	+	2804	3	NIC	ENSMUSG00000005442.14	novel	6096	20	NA	NA	-83	0	intron_retention	FALSE	canonical	3	129	junction_2	1	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	15	False	NA	NA	False	NA	NA	NA	24990512	24993570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_24992207_24992380_24992513_24992592
tx.17484	chr7	-	1164	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	5	-310	5	0	multi-exon	TRUE	canonical	3	385	junction_2	17.4570902500961	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8608	False	NA	NA	False	NA	NA	NA	24997302	24994473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
tx.17485	chr7	-	849	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	52	0	0	0	multi-exon	FALSE	canonical	3	245	junction_5	66.0714764478591	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8551	False	NA	NA	False	NA	NA	NA	24997359	24994473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
tx.17486	chr7	+	4932	10	ISM	ENSMUSG00000045039.10	ENSMUST00000153077.2	5669	18	8242	0	8242	0	3prime_fragment	FALSE	canonical	3	20	junction_4	7.54901677842801	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGCATCGTAACTTCAT	NA	False	NA	NA	False	NA	NA	NA	25053647	25065339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
tx.17487	chr7	-	3113	10	FSM	ENSMUSG00000003123.16	ENSMUST00000003207.11	3613	10	382	118	382	0	multi-exon	FALSE	canonical	3	24	junction_6	4.8099690715363	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGAGTGTGTTTTCCCAG	NA	False	NA	NA	False	NA	NA	NA	25095422	25079069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
tx.17488	chr7	-	3196	7	FSM	ENSMUSG00000074272.11	ENSMUST00000098668.3	1478	7	-95	-1623	-26	1	multi-exon	FALSE	canonical	3	11	junction_6	8	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTTGTGGGGTTTTCT	2822	False	NA	NA	False	NA	NA	NA	25177054	25161130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_25163326_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25175768_25176129_25176895
tx.17489	chr7	+	1463	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	2	0	2	0	multi-exon	FALSE	canonical	3	84	junction_1	20.2938414303453	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1741	False	NA	NA	False	NA	NA	NA	25318840	25324976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
tx.1749	chr10	+	1415	2	ISM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	275	22	275	-22	3prime_fragment	FALSE	canonical	3	59	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTCCCCCTTGATGCCA	NA	False	NA	NA	False	NA	NA	NA	80009052	80010958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_80010160_80010650
tx.17490	chr7	+	2876	5	NIC	ENSMUSG00000057229.12	novel	2387	6	NA	NA	13	-1	intron_retention	FALSE	canonical	3	96	junction_4	15.0332963783729	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGGCCTTTCCTCCC	1762	False	NA	NA	False	NA	NA	NA	25318861	25324975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
tx.17491	chr7	+	998	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	22	0	-5	0	multi-exon	FALSE	canonical	3	1190	junction_2	58.9528625259198	476	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	NA	False	NA	NA	NA	25358610	25367457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
tx.17492	chr7	+	1000	4	FSM	ENSMUSG00000063439.8	ENSMUST00000205658.2	995	4	-3	-2	-3	2	multi-exon	FALSE	canonical	3	77	junction_2	1.69967317119759	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCCTCCTTGTATCCG	NA	False	NA	NA	False	NA	NA	NA	25380201	25385985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_25380404_25380807_25380900_25382715_25382842_25385405
tx.17493	chr7	+	2174	7	FSM	ENSMUSG00000002603.16	ENSMUST00000002678.10	2175	7	2	-1	2	1	multi-exon	FALSE	canonical	3	17	junction_4	3.1446603773522	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTCCGTGTCATTG	NA	False	NA	NA	False	NA	NA	NA	25386428	25404503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_25387649_25391801_25391963_25393647_25393766_25396342_25396421_25396549_25396698_25403549_25403704_25404208
tx.17494	chr7	-	2856	4	ISM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	2900	6	-82	-6	3prime_fragment	FALSE	canonical	3	101	junction_3	5.43650214343336	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATCCATTCATCTGTT	NA	False	NA	NA	False	NA	NA	NA	25415613	25410536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159
tx.17495	chr7	-	3118	6	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	47.4189835403502	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATCCATTCATCTGTT	NA	False	NA	NA	False	NA	NA	NA	25418459	25410536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25416278_25416425_25418342
tx.17496	chr7	-	2972	5	FSM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	54	6	11	-6	multi-exon	FALSE	canonical	3	101	junction_3	5.52268050859363	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATCCATTCATCTGTT	NA	False	NA	NA	False	NA	NA	NA	25418459	25410536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25418342
tx.17497	chr7	-	3702	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	-35	-313	-28	-4	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGCAGGGTTGAAA	9514	False	NA	NA	False	NA	NA	NA	25454210	25420593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
tx.17498	chr7	-	3824	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-44	4	-44	-4	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	1542	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGCAGGGTTGAAA	9498	False	NA	NA	False	NA	NA	NA	25454226	25420593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
tx.17499	chr7	-	3022	13	NIC	ENSMUSG00000002602.17	novel	4265	20	NA	NA	-268	7	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	2.09496751499609	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAGATCTTAAATCTCT	3249	False	NA	NA	False	NA	NA	NA	25474371	25457047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473939
tx.175	chr1	-	3829	3	NNC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	-41	-4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	192	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTTCTGTTTCAAG	6334	False	NA	NA	False	NA	NA	NA	37469122	37456168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_37459741_37467422_37467507_37468949
tx.1750	chr10	+	2152	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	63	junction_2	9.10433352249844	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGGCCTCTCTGTTACA	NA	False	NA	NA	False	NA	NA	NA	80015294	80025844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
tx.17500	chr7	-	2656	9	FSM	ENSMUSG00000040703.12	ENSMUST00000043314.10	2745	9	91	-2	-4	2	multi-exon	FALSE	canonical	3	20	junction_7	4.7368238303741	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCCCCTCTGCCTGTGT	1695	False	NA	NA	False	NA	NA	NA	25515987	25501897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_25503185_25503340_25503483_25505295_25505484_25507468_25507611_25508603_25508784_25508862_25509024_25511026_25511177_25514309_25514476_25515747
tx.17501	chr7	+	3238	2	Intergenic	novelGene_352	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAGCTAAACACAGGAGC	NA	False	NA	NA	False	NA	NA	NA	26706918	26711436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_+_26707052_26708331
tx.17502	chr7	-	2549	5	ISM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	124	-330	-7	0	3prime_fragment	FALSE	canonical	3	566	junction_4	16.7984374273323	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	26865714	26858082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044
tx.17503	chr7	-	1702	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	232.127206505399	59	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	26866185	26858082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864407_26865154_26866108
tx.17504	chr7	-	2067	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	40	0	40	0	multi-exon	FALSE	canonical	3	451	junction_5	57.8840219749803	673	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	26866187	26858082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
tx.17505	chr7	-	1254	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_4	214.357085257287	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	26866198	26858083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864867_26865154_26866108
tx.17506	chr7	-	1181	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	10	1	2	-1	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	328	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	NA	False	NA	NA	NA	26878311	26867849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
tx.17507	chr7	-	1259	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	107	-1	-11	1	multi-exon	FALSE	canonical	3	1453	junction_6	315.533102683203	1111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	NA	False	NA	NA	NA	26895589	26886430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
tx.17508	chr7	-	3270	7	FSM	ENSMUSG00000003752.10	ENSMUST00000003850.8	3247	7	-23	0	10	0	multi-exon	FALSE	canonical	3	37	junction_2	5.28099317258495	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGGTATTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	26928076	26906596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_26907870_26911736_26911809_26912384_26912487_26913800_26914006_26916376_26916591_26919024_26919128_26926775
tx.17509	chr7	+	2177	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	0	4	0	1	multi-exon	TRUE	canonical	3	74	junction_1	14.7544528041883	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTCTTTTCTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	26932447	26957371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
tx.1751	chr10	+	2397	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	241	2	3	0	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8459	False	NA	NA	False	NA	NA	NA	80062508	80079735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
tx.17510	chr7	+	2201	14	FSM	ENSMUSG00000003762.14	ENSMUST00000108378.10	2276	14	76	-1	-72	0	multi-exon	FALSE	canonical	3	76	junction_6	13.8260537867321	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	26932713	26957370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
tx.17511	chr7	+	2741	10	FSM	ENSMUSG00000063160.13	ENSMUST00000079258.7	2760	10	21	-2	21	-1	multi-exon	FALSE	canonical	3	70	junction_4	11.8415464455544	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGGAAATCAAGGTGTG	NA	False	NA	NA	False	NA	NA	NA	26958170	26981568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
tx.17512	chr7	-	1610	8	ISM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	22978	1	-7	-1	3prime_fragment	FALSE	canonical	3	513	junction_4	58.3896132781808	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	27010110	27004565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945
tx.17513	chr7	-	4050	24	ISM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	5330	1	5280	-1	3prime_fragment	FALSE	canonical	3	305	junction_13	106.170387720557	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	27027758	27004565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
tx.17514	chr7	-	5092	30	FSM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	25	1	10	-1	multi-exon	FALSE	canonical	3	195	junction_24	119.840530186521	300	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	27033063	27004565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
tx.17515	chr7	-	2139	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-15	2	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	85.4033627850801	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATAGTCTTGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	27055394	27041555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
tx.17516	chr7	-	2315	18	FSM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	44	-1	-21	1	multi-exon	FALSE	canonical	3	272	junction_5	29.8825845289775	445	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATAGTCTTGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	27055400	27041556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
tx.17517	chr7	-	4776	19	FSM	ENSMUSG00000011751.17	ENSMUST00000108363.8	4724	19	-52	0	-52	0	multi-exon	FALSE	canonical	2	8	junction_18	8.28150549920323	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	NA	False	NA	NA	NA	27096030	27055807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27095913
tx.17518	chr7	+	836	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	35	157	-19	3	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTCTCTCTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	27147437	27165412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
tx.17519	chr7	-	1652	2	Genic_Genomic	ENSMUSG00000082016.4	novel	765	1	NA	NA	-64	904	multi-exon	FALSE	canonical	2	18	junction_1	0	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATCTGAAAGAAAG	8893	False	NA	NA	False	NA	NA	NA	27170024	27168291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr7_-_27169547_27169627
tx.1752	chr10	+	3369	13	FSM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	24	-1	-1	0	multi-exon	FALSE	canonical	3	168	junction_1	107.02790394202	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8463	False	NA	NA	False	NA	NA	NA	80062512	80079735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
tx.17520	chr7	-	1628	2	Genic_Genomic	ENSMUSG00000082016.4	novel	765	1	NA	NA	-65	904	multi-exon	FALSE	canonical	3	204	junction_1	0	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATCTGAAAGAAAG	8892	False	NA	NA	False	NA	NA	NA	27170025	27168291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr7_-_27169781_27169886
tx.17521	chr7	+	1352	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	-22	-1	-22	1	multi-exon	FALSE	canonical	3	104	junction_1	0	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTGTAATTAAATCTG	NA	False	NA	NA	False	NA	NA	NA	27173170	27176790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27173297_27175564
tx.17522	chr7	+	1196	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	33	4	33	-4	multi-exon	FALSE	canonical	3	24	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTGTGTGTGCTTCTTT	6622	False	NA	NA	False	NA	NA	NA	27186367	27189737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27186504_27188677
tx.17523	chr7	+	5088	2	ISM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	1	0	1	0	intron_retention	FALSE	canonical	3	43	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	NA	False	NA	NA	False	NA	NA	NA	27207231	27219466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_27207529_27214675
tx.17524	chr7	+	4481	3	FSM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	16	0	16	0	multi-exon	FALSE	canonical	3	33	junction_2	5	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	NA	False	NA	NA	False	NA	NA	NA	27207246	27219466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27207529_27214675_27214873_27215464
tx.17525	chr7	-	1882	12	ISM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	10412	6	-55	-6	3prime_fragment	FALSE	canonical	3	435	junction_11	36.0309784069025	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGGTATGAGATGG	NA	False	NA	NA	False	NA	NA	NA	27242225	27231430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168
tx.17526	chr7	-	2109	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	169	4	-27	-4	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	472	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGGTATGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	27252468	27231428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
tx.17527	chr7	-	2133	14	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-28	-4	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	126.954541554455	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGGTATGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	27252469	27231428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244711_27252422
tx.17528	chr7	-	2033	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-26	-4	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	130.304211367093	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGGTATGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	27252467	27231428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27252422
tx.17529	chr7	+	2801	11	NNC	ENSMUSG00000049643.16	novel	1989	11	NA	NA	-1	0	intron_retention	FALSE	canonical	2	11	junction_4	129.933983237643	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	429	False	NA	NA	False	NA	NA	NA	27252690	27281524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_27252779_27255838_27255960_27259976_27260029_27260463_27260597_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
tx.1753	chr10	+	2478	14	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	122.224887305831	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8480	False	NA	NA	False	NA	NA	NA	80062529	80079735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
tx.17530	chr7	+	2662	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	39	0	2	0	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	541	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	435	False	NA	NA	False	NA	NA	NA	27252696	27281524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
tx.17531	chr7	+	3883	13	ISM	ENSMUSG00000004056.16	ENSMUST00000167435.8	2865	15	-39	-3	-39	0	intron_retention	FALSE	canonical	3	377	junction_6	56.056704921594	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	27291131	27338878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516
tx.17532	chr7	+	3015	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	156	1373	-38	0	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	801	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	27291132	27338878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
tx.17533	chr7	-	1828	3	NIC	ENSMUSG00000040390.14	novel	3682	10	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	40.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCAAGGTGTAGGTGA	NA	False	NA	NA	False	NA	NA	NA	27373996	27363580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_27363999_27367773_27367955_27372767
tx.17534	chr7	-	1616	2	FSM	ENSMUSG00000040390.14	ENSMUST00000138243.2	1621	2	-8	13	5	-13	multi-exon	FALSE	canonical	3	84	junction_1	0	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGAAACACCACCCACT	NA	False	NA	NA	False	NA	NA	NA	27374014	27367585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_27367955_27372767
tx.17535	chr7	+	4515	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	97	0	97	0	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	NA	False	NA	NA	NA	27388861	27405909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
tx.17536	chr7	+	6142	5	ISM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	198	0	198	0	3prime_fragment	FALSE	canonical	3	19	junction_1	18.3762754659371	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	NA	False	NA	NA	NA	27388962	27405909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
tx.17537	chr7	+	4478	5	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	233	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.5554871372799	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	NA	False	NA	NA	NA	27391570	27405909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_27391665_27391906_27391960_27392906_27393034_27398077_27398177_27401804
tx.17538	chr7	+	4442	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	3	1451	3	-1451	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATATATTTAAA	NA	False	NA	NA	False	NA	NA	NA	27430816	27451676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
tx.17539	chr7	+	3803	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	-30	-336	-30	336	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTTTATTTTGCAT	378	False	NA	NA	False	NA	NA	NA	27538001	27556199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
tx.1754	chr10	+	1819	10	ISM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	5857	-1	-1682	0	3prime_fragment	FALSE	canonical	3	469	junction_4	48.7733483182449	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	NA	False	NA	NA	False	NA	NA	NA	80068345	80079735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
tx.17540	chr7	+	3352	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	11	148	11	-148	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGACTGAGTGAGTGGA	3338	False	NA	NA	False	NA	NA	NA	27560020	27580102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
tx.17541	chr7	-	7568	9	Fusion	ENSMUSG00000063047.10_ENSMUSG00000070709.13	novel	3354	5	NA	NA	11	1975	multi-exon	FALSE	canonical	3	5	junction_4	26.0144190786571	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTAGCTTGTCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	27678585	27604841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_-_27611687_27620121_27620221_27625708_27625836_27626825_27626879_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
tx.17542	chr7	-	3989	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	-24	-25	0	25	multi-exon	FALSE	canonical	3	18	junction_4	22.29798197147	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAGTTAAAATCCTATT	NA	False	NA	NA	False	NA	NA	NA	27678596	27660760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
tx.17543	chr7	-	5398	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	2	-778	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAAATCTTAATT	NA	False	NA	NA	False	NA	NA	NA	27678594	27659337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
tx.17544	chr7	-	6273	3	ISM	ENSMUSG00000096916.8	ENSMUST00000180024.2	2070	4	976	-4236	976	378	3prime_fragment	FALSE	canonical	3	147	junction_2	7.5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCATAGCAGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	27706865	27683900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_27689948_27704643_27704743_27706738
tx.17545	chr7	-	3989	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1648	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	28.6454184818445	219	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTGAGTCCATTAAATA	NA	False	NA	NA	False	NA	NA	NA	27713581	27686488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713445
tx.17546	chr7	-	4146	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1645	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	44.8578000154067	75	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATTGTGAGTCCATTAA	NA	False	NA	NA	False	NA	NA	NA	27713581	27686491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713445
tx.17547	chr7	-	3870	5	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1644	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	65.3657976314831	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	NA	False	NA	NA	NA	27713581	27686492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27713445
tx.17548	chr7	-	1393	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	45	2	0	-2	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	1711	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTTCTTAGGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	27749481	27741133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
tx.17549	chr7	+	1186	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	11	0	-1	0	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	1268	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8542	False	NA	NA	False	NA	NA	NA	27869145	27878694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
tx.1755	chr10	+	754	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	5	-1	-3	0	multi-exon	FALSE	canonical	3	1255	junction_1	343.259525783067	488	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9697	False	NA	NA	False	NA	NA	NA	80085290	80092627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
tx.17550	chr7	+	2393	11	FSM	ENSMUSG00000002409.19	ENSMUST00000172761.8	2018	11	-5	-370	-5	-1	multi-exon	FALSE	canonical	0	0	junction_8	5.57135531087365	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCCTGAGCGTTTGC	NA	False	NA	NA	False	NA	NA	NA	27878913	27886718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885258_27885455_27885786_27885894_27885976
tx.17551	chr7	+	2528	11	FSM	ENSMUSG00000002409.19	ENSMUST00000085901.13	2534	11	5	1	5	-1	multi-exon	TRUE	canonical	2	7	junction_5	4.15210789840534	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCCTGAGCGTTTGC	NA	False	NA	NA	False	NA	NA	NA	27878898	27886718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885455_27885786_27885894_27885976
tx.17552	chr7	-	1331	10	ISM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	1087	2	954	-2	3prime_fragment	FALSE	canonical	3	2125	junction_9	143.83023257462	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGCCGTGTGTGGCTCT	3743	False	NA	NA	False	NA	NA	NA	28010410	28004942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293
tx.17553	chr7	-	1497	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	16	2	0	-2	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	1510	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGCCGTGTGTGGCTCT	2672	False	NA	NA	False	NA	NA	NA	28011481	28004942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
tx.17554	chr7	-	3534	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	225	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	158.096782360023	243	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	28037906	28014318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776
tx.17555	chr7	-	3549	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	156.353178178541	1140	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	28038180	28014318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
tx.17556	chr7	+	556	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	94	459	-17	0	multi-exon	FALSE	canonical	3	19383	junction_3	806.134294023024	1531	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	28050170	28052121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
tx.17557	chr7	-	5059	18	NNC	ENSMUSG00000037552.18	novel	4880	19	NA	NA	-73	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7.97096808298282	12	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	28072097	28059027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070539_28070671_28071284
tx.17558	chr7	-	5047	18	NNC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7.75177175863195	17	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGCCTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	28072084	28059029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070539_28070671_28071284
tx.17559	chr7	-	1793	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	998	-1	0	1	multi-exon	FALSE	canonical	3	36	junction_1	0	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAATTTGTCTTTTTCG	6671	False	NA	NA	False	NA	NA	NA	28078680	28076207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28077919_28078598
tx.1756	chr10	+	719	7	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	2944	0	-919	0	3prime_fragment	FALSE	canonical	3	2110	junction_6	98.5387684563233	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	NA	False	NA	NA	False	NA	NA	NA	80088229	80092626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
tx.17560	chr7	-	666	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	27	588	27	-588	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTCCTGTTGCTGATT	NA	False	NA	NA	False	NA	NA	NA	28092106	28086158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
tx.17561	chr7	-	760	5	NNC	ENSMUSG00000003444.9	novel	1281	4	NA	NA	36	-590	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	249.415692168717	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGGTTCCTGTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	28092097	28086160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_28086450_28086623_28086729_28090236_28090322_28090514_28090574_28091875
tx.17562	chr7	+	1993	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	7	3	-4	2	multi-exon	FALSE	canonical	3	164	junction_5	16.9726546514433	230	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCCTAAAGTCTCTGT	576	False	NA	NA	False	NA	NA	NA	28092382	28098810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
tx.17563	chr7	-	4502	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	-111	0	-75	0	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	413	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAAGACTCTTCATTTT	6525	False	NA	NA	False	NA	NA	NA	28135727	28098946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
tx.17564	chr7	-	4710	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-77	0	intron_retention	FALSE	canonical	3	429	junction_11	37.2212504841429	536	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAAGACTCTTCATTTT	6523	False	NA	NA	False	NA	NA	NA	28135729	28098946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
tx.17565	chr7	-	1698	3	ISM	ENSMUSG00000109336.2	ENSMUST00000207766.2	2336	13	-100	11776	-100	-5939	5prime_fragment	FALSE	canonical	3	429	junction_2	55	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTCTAGTTTCTCTT	6500	False	NA	NA	False	NA	NA	NA	28135752	28112661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_28113768_28122860_28123263_28135562
tx.17566	chr7	+	663	7	FSM	ENSMUSG00000060791.16	ENSMUST00000108292.9	657	7	-3	-3	-3	3	multi-exon	FALSE	canonical	3	339	junction_1	45.6070170039655	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTATCTGCAAAATCTG	1812	False	NA	NA	False	NA	NA	NA	28136868	28145974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
tx.17567	chr7	+	3436	5	NIC	ENSMUSG00000030600.16	novel	812	4	NA	NA	-193	-1	combination_of_known_junctions	TRUE	canonical	3	51	junction_1	6.68954408012983	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	3785	False	NA	NA	False	NA	NA	NA	28151211	28167666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_28151470_28153921_28153955_28157383_28157439_28158051_28159489_28166013
tx.17568	chr7	-	2878	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	19	2	-11	0	multi-exon	TRUE	canonical	3	622	junction_9	35.4843036069349	902	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	4615	False	NA	NA	False	NA	NA	NA	28297591	28258245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
tx.17569	chr7	+	1969	6	NIC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	31	junction_1	12.2637677734047	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCATATCTTTTTCTT	8825	False	NA	NA	False	NA	NA	NA	28392253	28398763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
tx.1757	chr10	-	977	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	8	3	8	-3	multi-exon	FALSE	canonical	3	22	junction_3	3.91918358845308	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGGTTGGTTGGCAGT	9257	False	NA	NA	False	NA	NA	NA	80096838	80093987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
tx.17570	chr7	+	1507	6	NNC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-23	997	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.2688633155984	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGGTATCTGT	8822	False	NA	NA	False	NA	NA	NA	28392250	28399760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28399125
tx.17571	chr7	+	2841	6	NNC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	-13	994	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	21.4811545313561	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	9127	False	NA	NA	False	NA	NA	NA	28392555	28399757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_28392578_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
tx.17572	chr7	+	1978	7	FSM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	89	junction_6	22.6838170411321	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416208	28437569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
tx.17573	chr7	+	1860	8	FSM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	-48	-6	-20	0	multi-exon	FALSE	canonical	3	49	junction_7	33.4310133418242	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416208	28437569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
tx.17574	chr7	+	1652	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	-89	0	-20	0	multi-exon	FALSE	canonical	3	40	junction_6	37.5340586075574	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416208	28437569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
tx.17575	chr7	-	879	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	4	0	4	0	multi-exon	FALSE	canonical	3	939	junction_1	0	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1698	False	NA	NA	False	NA	NA	NA	28441191	28439065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28439665_28440911
tx.17576	chr7	-	710	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	13	-1	13	0	multi-exon	FALSE	canonical	3	503	junction_2	218	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1657	False	NA	NA	False	NA	NA	NA	28441232	28439065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28439665_28440911_28440980_28441189
tx.17577	chr7	+	1875	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	-15	8	-5	-8	multi-exon	TRUE	canonical	3	180	junction_5	21.0516824347446	225	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCATGAGCACAGGAAGT	263	False	NA	NA	False	NA	NA	NA	28441411	28453288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
tx.17578	chr7	-	1220	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	12	11	12	-11	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	327	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGACTGACCCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	28465927	28458467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
tx.17579	chr7	+	1797	15	FSM	ENSMUSG00000015149.15	ENSMUST00000122915.8	1828	15	23	8	-9	-8	multi-exon	FALSE	canonical	3	61	junction_1	14.0365775815931	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTAACCATGACTTGTG	NA	False	NA	NA	False	NA	NA	NA	28466182	28488077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
tx.1758	chr10	+	2074	12	FSM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	-82	2	8	-2	multi-exon	FALSE	canonical	3	126	junction_4	263.9061002555	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGAGTGCTGTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	80100825	80124240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
tx.17580	chr7	+	2104	5	ISM	ENSMUSG00000051735.8	ENSMUST00000059857.8	2871	12	7015	3	-954	-3	3prime_fragment	FALSE	canonical	3	40	junction_1	3.11247489949718	51	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGGAGGTGCAGACCT	NA	False	NA	NA	False	NA	NA	NA	28495408	28498385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_28495772_28496077_28496372_28496534_28496667_28496984_28497149_28497234
tx.17581	chr7	+	1674	4	ISM	ENSMUSG00000051735.8	ENSMUST00000209035.2	2898	12	7745	0	-224	0	3prime_fragment	FALSE	canonical	3	41	junction_1	2.86744175568088	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACGAGCAATGGAGGTGC	NA	False	NA	NA	False	NA	NA	NA	28496138	28498379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_28496372_28496534_28496667_28496984_28497149_28497234
tx.17582	chr7	+	2107	13	FSM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	21	14	21	3	multi-exon	FALSE	canonical	3	4757	junction_8	508.744178235868	4043	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGGGCTCCAAGGGT	NA	False	NA	NA	False	NA	NA	NA	28510335	28521677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
tx.17583	chr7	+	1179	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	89	-1	-43	1	multi-exon	TRUE	canonical	3	645	junction_5	36.3137901908447	362	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTTTACTGCAGT	NA	False	NA	NA	False	NA	NA	NA	28524730	28531673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
tx.17584	chr7	+	3064	20	NNC	ENSMUSG00000054083.9	novel	3040	21	NA	NA	2	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1.14587058195143	4	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTAAGTTTTTAAAGTT	NA	False	NA	NA	False	NA	NA	NA	28580848	28593015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_28581386_28581975_28582046_28582194_28582314_28582552_28582687_28585152_28585322_28585795_28585871_28585957_28586044_28586122_28586198_28586997_28587162_28587244_28587492_28588036_28588246_28588497_28588541_28588621_28588682_28589205_28589264_28589580_28589652_28589748_28589812_28590335_28590415_28592043_28592161_28592247_28592307_28592386
tx.17585	chr7	-	3835	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	36	6	36	-6	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	2215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTCTGGTGTCATCT	NA	False	NA	NA	False	NA	NA	NA	28661729	28592678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
tx.17586	chr7	-	3836	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	35	-6	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	958	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTCTGGTGTCATCT	NA	False	NA	NA	False	NA	NA	NA	28661730	28592678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
tx.17587	chr7	-	768	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	6	0	-3	0	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	813	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	False	NA	NA	False	NA	NA	NA	28681233	28670796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
tx.17588	chr7	+	2752	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	-30	2	-30	0	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTCGGAGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	28682222	28702701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
tx.17589	chr7	+	2050	16	ISM	ENSMUSG00000030589.16	ENSMUST00000159975.8	2296	17	2691	0	2551	0	3prime_fragment	FALSE	non_canonical	0	0	junction_2	17.9245331567907	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	404	False	NA	NA	False	NA	NA	NA	28837048	28851046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
tx.1759	chr10	+	2066	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	13	2	13	-2	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	614	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGAGTGCTGTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	80100830	80124240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
tx.17590	chr7	+	2782	14	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2557	0	intron_retention	FALSE	non_canonical	0	0	junction_2	15.6541769006828	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	410	False	NA	NA	False	NA	NA	NA	28837054	28851046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
tx.17591	chr7	+	2036	16	ISM	ENSMUSG00000030589.16	ENSMUST00000032811.12	4621	17	2689	2341	2549	1	3prime_fragment	TRUE	non_canonical	0	0	junction_2	15.5905954558082	29	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGCCAGTCACACTC	402	False	NA	NA	False	NA	NA	NA	28837046	28851045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
tx.17592	chr7	-	2583	5	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	257	junction_2	27.2213151776324	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	28855630	28851936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28855456_28855554
tx.17593	chr7	-	2210	7	FSM	ENSMUSG00000030590.16	ENSMUST00000147561.8	2169	7	-39	-2	12	0	multi-exon	FALSE	canonical	3	257	junction_2	24.4386988196999	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	NA	False	NA	NA	NA	28855647	28851934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
tx.17594	chr7	-	1270	8	FSM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	22	1	-9	1	multi-exon	FALSE	canonical	3	257	junction_3	23.9565934002925	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATCTTGTTTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	28855637	28851935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
tx.17595	chr7	-	2261	6	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	4	1	intron_retention	FALSE	canonical	3	257	junction_2	24.6121921006643	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATCTTGTTTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	28855624	28851935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099_28855456_28855554
tx.17596	chr7	-	1346	7	FSM	ENSMUSG00000030590.16	ENSMUST00000123545.8	1359	7	13	0	-7	0	multi-exon	FALSE	canonical	3	257	junction_3	25.8698666405531	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	28855615	28851936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309
tx.17597	chr7	-	1347	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	39	5	-32	-5	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	816	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATATGAGTGTATCCA	NA	False	NA	NA	False	NA	NA	NA	28879938	28873617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
tx.17598	chr7	-	4179	3	FSM	ENSMUSG00000046410.11	ENSMUST00000085818.6	4084	3	-98	3	-98	-3	multi-exon	FALSE	canonical	1	1	junction_2	2	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTACTACCTTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	28932038	28921353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28924685_28924896_28925293_28931586
tx.17599	chr7	+	1115	8	FSM	ENSMUSG00000030588.13	ENSMUST00000108238.8	1126	8	11	0	11	0	multi-exon	FALSE	canonical	3	755	junction_1	273.775194535329	578	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6048	False	NA	NA	False	NA	NA	NA	28937764	28946954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
tx.176	chr1	-	3798	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	61	4	-42	-4	multi-exon	FALSE	canonical	3	395	junction_2	27.5	547	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTTCTGTTTCAAG	6333	False	NA	NA	False	NA	NA	NA	37469123	37456168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_37459709_37467422_37467507_37468949
tx.1760	chr10	+	2063	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105361.10	1537	12	-13	-513	-13	-2	multi-exon	FALSE	canonical	3	55	junction_11	285.507146282737	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGAGTGCTGTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	80100836	80124240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123369
tx.17600	chr7	-	882	6	NNC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	244	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	491.498931840141	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	713	False	NA	NA	False	NA	NA	NA	28981091	28955765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_28956178_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
tx.17601	chr7	-	1259	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	-48	0	-46	0	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	281	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	421	False	NA	NA	False	NA	NA	NA	28981383	28955765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
tx.17602	chr7	-	1417	7	FSM	ENSMUSG00000074227.13	ENSMUST00000098604.12	1384	7	-33	0	-33	0	multi-exon	FALSE	canonical	0	0	junction_2	452.801066204084	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	434	False	NA	NA	False	NA	NA	NA	28981370	28955765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
tx.17603	chr7	-	2589	5	NIC	ENSMUSG00000074227.13	novel	1384	7	NA	NA	-46	0	intron_retention	FALSE	canonical	0	0	junction_1	445.694612374886	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	421	False	NA	NA	False	NA	NA	NA	28981383	28955765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
tx.17604	chr7	+	2269	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	12	2	combination_of_known_junctions	TRUE	canonical	3	21	junction_7	17.2568826848884	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTCCATCTCTAACC	1776	False	NA	NA	False	NA	NA	NA	29003387	29017011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
tx.17605	chr7	+	2318	12	FSM	ENSMUSG00000030584.15	ENSMUST00000049977.13	2309	12	-9	0	-9	0	multi-exon	FALSE	canonical	3	46	junction_7	12.1008161735527	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCATCTCTAACCTC	1780	False	NA	NA	False	NA	NA	NA	29003391	29017013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
tx.17606	chr7	+	2341	12	FSM	ENSMUSG00000030584.15	ENSMUST00000108231.8	2040	12	20	-321	-5	1	multi-exon	FALSE	canonical	3	12	junction_10	19.1570283587301	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCTTCCATCTCTAAC	1784	False	NA	NA	False	NA	NA	NA	29003395	29017010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015638_29015751_29015905
tx.17607	chr7	+	2207	11	NIC	ENSMUSG00000030584.15	novel	1574	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	20.5338744517444	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCATCTCTAACCTC	5826	False	NA	NA	False	NA	NA	NA	29007437	29017013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
tx.17608	chr7	+	2239	12	FSM	ENSMUSG00000030584.15	ENSMUST00000065181.12	1574	12	17	-682	11	1	multi-exon	FALSE	canonical	3	23	junction_1	16.304438375602	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCTTCCATCTCTAAC	5842	False	NA	NA	False	NA	NA	NA	29007453	29017010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
tx.17609	chr7	-	8008	22	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	-350	-3	combination_of_known_junctions	TRUE	canonical	3	33	junction_11	9.24962461700774	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	NA	False	NA	NA	False	NA	NA	NA	29218416	29019799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
tx.1761	chr10	+	499	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	1	0	1	0	multi-exon	FALSE	canonical	3	5732	junction_1	1157.99510649513	919	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6343	False	NA	NA	False	NA	NA	NA	80128287	80129948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
tx.17610	chr7	-	3013	8	NIC	ENSMUSG00000030583.17	novel	2660	10	NA	NA	-56	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	14.6844357420101	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	965	False	NA	NA	False	NA	NA	NA	29041349	29019799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29041243
tx.17611	chr7	+	3017	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	23	1073	23	-1073	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTAGGAGCTTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	29467999	29478173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
tx.17612	chr7	+	3538	5	NIC	ENSMUSG00000047473.15	novel	3558	5	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	7.96868872525461	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATGTTAAACATGAAT	NA	False	NA	NA	False	NA	NA	NA	29483438	29494126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_29484327_29485643_29485729_29487473_29487601_29488765_29488862_29491784
tx.17613	chr7	+	1584	4	FSM	ENSMUSG00000047473.15	ENSMUST00000126504.2	3707	4	0	2123	0	-2123	multi-exon	FALSE	canonical	1	3	junction_1	10.7806410858642	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTATTTGTATGGTTGC	NA	False	NA	NA	False	NA	NA	NA	29483447	29489214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29484327_29485599_29485729_29487473_29487601_29488765
tx.17614	chr7	+	4417	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	-33	-1028	-33	1028	multi-exon	FALSE	canonical	2	3	junction_1	16.6789538041209	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACCAGATTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	29515505	29531458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
tx.17615	chr7	+	4510	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-42	-1092	-37	1027	multi-exon	TRUE	canonical	3	32	junction_1	5.78791845139511	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGACCAGATTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	29515501	29531457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
tx.17616	chr7	-	3744	4	FSM	ENSMUSG00000050855.17	ENSMUST00000145098.2	3712	4	-14	-18	-7	18	multi-exon	FALSE	canonical	3	25	junction_3	12.2836838484589	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTGTGTGTATCTGTGT	3437	False	NA	NA	False	NA	NA	NA	29553080	29542656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_29545674_29545893_29546386_29550366_29550443_29552921
tx.17617	chr7	-	2773	5	FSM	ENSMUSG00000050855.17	ENSMUST00000085792.5	2764	5	-7	-2	-7	2	multi-exon	FALSE	canonical	3	25	junction_4	10.6624340560681	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGACTTTGTGGTGTT	3437	False	NA	NA	False	NA	NA	NA	29553080	29543358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552921
tx.17618	chr7	-	2852	5	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	9.83298021964857	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGACTTTGTGGTGTT	3429	False	NA	NA	False	NA	NA	NA	29553088	29543358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552850
tx.17619	chr7	-	3115	4	NNC	ENSMUSG00000050855.17	novel	3712	4	NA	NA	-7	4	intron_retention	FALSE	canonical	3	27	junction_3	11.3431330181157	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGACTTTGTGGTGTTCG	3437	False	NA	NA	False	NA	NA	NA	29553080	29543356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_29545674_29545893_29546386_29550366_29550443_29552850
tx.1762	chr10	-	1642	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	2	5	2	-5	multi-exon	FALSE	canonical	3	349	junction_1	0	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGATGGAGTGGCTCGCTT	8719	False	NA	NA	False	NA	NA	NA	80156369	80154092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80155382_80156016
tx.17620	chr7	+	2529	4	FSM	ENSMUSG00000058402.15	ENSMUST00000074876.13	2537	4	1	7	1	-7	multi-exon	FALSE	canonical	3	31	junction_2	4.02768199119819	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAATATTAGCTGCTAT	NA	False	NA	NA	False	NA	NA	NA	29559404	29575923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29559519_29560440_29560494_29572316_29572359_29573603
tx.17621	chr7	+	3458	5	NNC	ENSMUSG00000058402.15	novel	2537	4	NA	NA	12	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.7270979012358	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGCCCTCAGACTGGT	NA	False	NA	NA	False	NA	NA	NA	29559415	29576654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_29559519_29560440_29560494_29572316_29572359_29572728_29572938_29573603
tx.17622	chr7	+	3920	3	FSM	ENSMUSG00000058402.15	ENSMUST00000057652.7	2744	3	-69	-1107	-7	642	multi-exon	FALSE	canonical	2	5	junction_1	17.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACCGGTGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	29559396	29577359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29559519_29572316_29572359_29573603
tx.17623	chr7	-	3403	5	NIC	ENSMUSG00000062040.15	novel	3150	5	NA	NA	6	-108	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	18.1245689603919	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAAAGTGTACCTGG	NA	False	NA	NA	False	NA	NA	NA	29605523	29592865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605478
tx.17624	chr7	-	3681	5	NIC	ENSMUSG00000062040.15	novel	3845	5	NA	NA	1	-107	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	15.9902313929474	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAAGTGTACCTGGC	NA	False	NA	NA	False	NA	NA	NA	29605956	29592864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605634
tx.17625	chr7	-	3425	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	3	-278	3	-105	multi-exon	FALSE	canonical	2	2	junction_4	19.4084388862165	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAAGTGTACCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	29605526	29592862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
tx.17626	chr7	+	2591	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	22	1	22	-1	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAGTTTCATAATTTT	NA	False	NA	NA	False	NA	NA	NA	29607963	29616231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
tx.17627	chr7	+	4611	4	NNC	ENSMUSG00000099689.7	novel	3208	4	NA	NA	13	2	intron_retention	FALSE	canonical	0	0	junction_3	14.9740516301441	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCATAATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	29607954	29616234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_29608077_29609607_29609673_29611593_29612188_29612404
tx.17628	chr7	-	3929	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	15.0119952038362	25	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATATTGCTCGTGGTC	NA	False	NA	NA	False	NA	NA	NA	29653498	29632213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
tx.17629	chr7	-	3707	5	NIC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	-51	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	18.3626659284539	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGATATTGCTCGTGGT	5327	False	NA	NA	False	NA	NA	NA	29643231	29632214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29643056
tx.1763	chr10	+	1937	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	190	0	-2	0	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	393	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7217	False	NA	NA	False	NA	NA	NA	80165976	80172275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
tx.17630	chr7	+	7180	10	NIC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	59.6777353689417	40	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	NA	False	NA	NA	NA	29683379	29727707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
tx.17631	chr7	+	7193	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	205	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTCAAGACTCACTTTCT	NA	False	NA	NA	False	NA	NA	NA	29683368	29727706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
tx.17632	chr7	-	3468	6	NNC	ENSMUSG00000053985.11	novel	3411	5	NA	NA	-14	-18	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	6.15142259969188	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGCTTTATAGTCAA	NA	False	NA	NA	False	NA	NA	NA	29750819	29735801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864_29749926_29750769
tx.17633	chr7	-	2751	5	NIC	ENSMUSG00000053985.11	novel	3411	5	NA	NA	871	-155	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	3.67423461417477	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCTGCATTTATAAACC	NA	False	NA	NA	False	NA	NA	NA	29749927	29736470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864
tx.17634	chr7	-	2786	6	NIC	ENSMUSG00000053985.11	novel	3411	5	NA	NA	-7	-164	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	3.65513337649941	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCACATCTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	29750812	29736479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864_29749929_29750769
tx.17635	chr7	-	1682	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	27	0	27	0	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTGTGTGGCAGTGTAA	9950	False	NA	NA	False	NA	NA	NA	29789925	29776761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
tx.17636	chr7	+	3646	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	359	1	-9	-1	multi-exon	FALSE	canonical	3	89	junction_1	24	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTTGTTGTTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	29794577	29807046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29794637_29798952_29799148_29803654
tx.17637	chr7	+	3588	2	ISM	ENSMUSG00000049421.14	ENSMUST00000134365.8	594	4	4349	-2	1370	-1	intron_retention	FALSE	canonical	3	137	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTTGTTGTTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	29798951	29807046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_29799148_29803654
tx.17638	chr7	+	3975	5	NIC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-2	1828	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	10.5445483544816	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTAGTGTATGAGGT	5257	False	NA	NA	False	NA	NA	NA	29821364	29836203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_29821502_29825192_29825267_29830097_29830253_29830956_29831050_29832687
tx.17639	chr7	+	6454	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-15	4325	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	11.4537111889553	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTTCTAGAGTTTTGT	5244	False	NA	NA	False	NA	NA	NA	29821351	29838700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832690
tx.1764	chr10	+	2070	15	FSM	ENSMUSG00000035486.15	ENSMUST00000105351.2	2100	15	26	4	26	-4	multi-exon	FALSE	canonical	1	5	junction_11	2.25876975726313	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	80192318	80201319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80192502_80193817_80193926_80194075_80194193_80194620_80194751_80195075_80195164_80195243_80195340_80195988_80196188_80196273_80196401_80196519_80196597_80196955_80197029_80197237_80197316_80198842_80199000_80199849_80199980_80200056_80200168_80200923
tx.17640	chr7	+	6452	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	-8	-4327	-8	4327	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTAGAGTTTTGTTT	5251	False	NA	NA	False	NA	NA	NA	29821358	29838702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
tx.17641	chr7	+	5858	3	ISM	ENSMUSG00000074220.11	ENSMUST00000156543.2	730	4	5086	-5355	5086	3950	3prime_fragment	FALSE	canonical	3	29	junction_2	4.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGAACCTCTCTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	29830125	29838325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_29830253_29830956_29831050_29832687
tx.17642	chr7	-	2821	2	FSM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	-13	-779	10	779	multi-exon	FALSE	canonical	3	29	junction_1	0	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTAAATCCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	29869165	29859914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_29862654_29869083
tx.17643	chr7	-	2950	2	NIC	ENSMUSG00000037029.9	novel	585	3	NA	NA	4	780	intron_retention	FALSE	canonical	3	14	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATCCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	29869148	29859913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29862799_29869083
tx.17644	chr7	+	5115	3	FSM	ENSMUSG00000066647.9	ENSMUST00000209028.2	5117	3	2	0	2	0	multi-exon	FALSE	canonical	3	26	junction_2	2	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCACGCGTGTG	9191	False	NA	NA	False	NA	NA	NA	29869301	29881749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29869640_29875275_29875372_29877068
tx.17645	chr7	+	360	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	33	0	-17	0	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTCCAGCCTGTGTGT	5707	False	NA	NA	False	NA	NA	NA	29883601	29885455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
tx.17646	chr7	-	1282	9	FSM	ENSMUSG00000001794.14	ENSMUST00000207082.2	1241	9	-48	7	-48	0	multi-exon	FALSE	canonical	3	1474	junction_7	82.1492544092763	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	NA	False	NA	NA	False	NA	NA	NA	29892445	29886367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291
tx.17647	chr7	-	1327	10	ISM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	1007	-1	-260	0	3prime_fragment	FALSE	canonical	3	1106	junction_9	168.3138602598	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	29893466	29886366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302
tx.17648	chr7	-	1449	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	-20	0	-20	0	multi-exon	FALSE	canonical	3	766	junction_10	279.009032111866	809	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	NA	False	NA	NA	False	NA	NA	NA	29894493	29886367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
tx.17649	chr7	-	920	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	496	0	496	0	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	260	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAGTCTCTTGATTCC	NA	False	NA	NA	False	NA	NA	NA	29931201	29923555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
tx.1765	chr10	-	3285	2	FSM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	-21	2	-21	-2	multi-exon	FALSE	canonical	3	72	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCTGGCGTTCGCGTGG	NA	False	NA	NA	False	NA	NA	NA	80223514	80216190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80218456_80222494
tx.17650	chr7	+	839	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	-23	3	-23	0	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	29931349	29932812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
tx.17651	chr7	-	4670	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_10	38.4508107034169	25	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	NA	False	NA	NA	NA	29979835	29939562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
tx.17652	chr7	-	4724	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	41	junction_22	30.5222607032556	177	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	NA	False	NA	NA	NA	29979835	29939562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
tx.17653	chr7	-	4780	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	0	combination_of_known_junctions	TRUE	canonical	1	41	junction_22	36.4423774608628	57	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	NA	False	NA	NA	NA	29979834	29939562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
tx.17654	chr7	+	932	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	50	0	-10	0	multi-exon	FALSE	canonical	3	231	junction_5	88.8144132446981	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30008191	30013729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
tx.17655	chr7	+	1135	6	FSM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	-22	-1	-11	0	multi-exon	FALSE	canonical	3	431	junction_1	28.3125413906982	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30008190	30013729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30013343
tx.17656	chr7	+	1342	8	FSM	ENSMUSG00000019737.15	ENSMUST00000054594.15	1355	8	12	1	12	0	multi-exon	FALSE	canonical	3	130	junction_4	40.5593543401494	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	NA	False	NA	NA	NA	30014252	30018470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
tx.17657	chr7	+	2291	6	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	15	0	intron_retention	FALSE	canonical	3	156	junction_2	32.932658562588	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	NA	False	NA	NA	NA	30014255	30018471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30017468_30018097_30018157_30018248
tx.17658	chr7	+	2012	12	FSM	ENSMUSG00000036931.16	ENSMUST00000108176.9	2014	12	1	1	1	0	multi-exon	FALSE	canonical	2	3	junction_1	5.20965410250706	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTGTGGTGTCATTAA	NA	False	NA	NA	False	NA	NA	NA	30121157	30128170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_30121260_30122827_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125447_30125540_30125690_30126492_30126610_30126850_30127016_30127558
tx.17659	chr7	-	2391	17	FSM	ENSMUSG00000006651.9	ENSMUST00000006828.9	2343	17	-48	0	-48	0	multi-exon	TRUE	canonical	3	317	junction_16	59.4064390449386	520	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	30145008	30134406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
tx.1766	chr10	-	3109	3	NIC	ENSMUSG00000048696.12	novel	3266	2	NA	NA	-21	-2	combination_of_known_junctions	FALSE	non_canonical	2	28	junction_1	22	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCTGGCGTTCGCGTGG	NA	False	NA	NA	False	NA	NA	NA	80223514	80216190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80216897_80217072_80218456_80222494
tx.17660	chr7	+	2897	19	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	5577	-26	5577	26	3prime_fragment	FALSE	canonical	2	33	junction_1	11.515555769973	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGATGCCCCAGTGGGA	NA	False	NA	NA	False	NA	NA	NA	30164726	30186674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
tx.17661	chr7	-	2515	12	FSM	ENSMUSG00000036864.17	ENSMUST00000215288.2	2465	12	-48	-2	-16	2	multi-exon	TRUE	canonical	3	27	junction_11	10.5595517059866	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCAGTTTACTGTTCA	NA	False	NA	NA	False	NA	NA	NA	30251740	30238556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30250182_30250260_30251632
tx.17662	chr7	-	2434	11	NIC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	7.82304288624318	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCCAGTTTACTGTT	NA	False	NA	NA	False	NA	NA	NA	30251738	30238558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30251632
tx.17663	chr7	-	997	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	1	0	1	0	multi-exon	FALSE	canonical	3	222	junction_2	22.8363744933385	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCTCAAGTGCATTTA	4886	False	NA	NA	False	NA	NA	NA	30259070	30254865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
tx.17664	chr7	-	692	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	16	0	16	0	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTTCTTGGGATCTT	1306	False	NA	NA	False	NA	NA	NA	30262650	30261289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
tx.17665	chr7	+	870	8	FSM	ENSMUSG00000078765.12	ENSMUST00000043273.16	884	8	11	3	2	0	multi-exon	FALSE	canonical	3	411	junction_1	81.3154602866678	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	30262756	30264787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
tx.17666	chr7	-	1745	7	ISM	ENSMUSG00000006307.17	ENSMUST00000131002.2	6345	35	14049	-2	-627	0	3prime_fragment	FALSE	canonical	3	102	junction_6	31.244999599936	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	9663	False	NA	NA	False	NA	NA	NA	30270716	30268282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125
tx.17667	chr7	-	2591	10	ISM	ENSMUSG00000006307.17	ENSMUST00000006470.14	8469	37	13291	0	-1252	0	3prime_fragment	FALSE	canonical	3	102	junction_6	26.8429359399553	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	5528	False	NA	NA	False	NA	NA	NA	30274851	30268282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749
tx.17668	chr7	-	7045	35	ISM	ENSMUSG00000006307.17	ENSMUST00000006470.14	8469	37	2676	0	-701	0	3prime_fragment	FALSE	canonical	3	47	junction_34	35.509209780545	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	NA	False	NA	NA	NA	30285466	30268282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418
tx.17669	chr7	-	8488	37	FSM	ENSMUSG00000006307.17	ENSMUST00000006470.14	8469	37	-19	0	-10	0	multi-exon	FALSE	canonical	3	32	junction_36	36.953257094288	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	NA	False	NA	NA	NA	30288161	30268282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
tx.1767	chr10	-	1473	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	92	1	-36	-1	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	389	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	NA	False	NA	NA	NA	80235292	80228373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
tx.17670	chr7	-	5022	2	ISM	ENSMUSG00000006310.11	ENSMUST00000108151.3	1775	6	-1908	0	-1908	0	intron_retention	FALSE	canonical	3	83	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	NA	False	NA	NA	NA	30294275	30289105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30289633_30289780
tx.17671	chr7	-	1869	6	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	21.6277599394852	38	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	NA	False	NA	NA	NA	30298329	30289105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30298204
tx.17672	chr7	-	488	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	17	113	17	0	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	933	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTGTGTGTATTACAC	NA	False	NA	NA	False	NA	NA	NA	30325559	30316398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
tx.17673	chr7	-	1615	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	169	0	-4	0	multi-exon	TRUE	canonical	3	640	junction_5	133.345925331332	509	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3780	False	NA	NA	False	NA	NA	NA	30349573	30340425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
tx.17674	chr7	-	1543	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	-19	2	-19	0	multi-exon	FALSE	canonical	3	345	junction_5	209.790818435889	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3765	False	NA	NA	False	NA	NA	NA	30349588	30340425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
tx.17675	chr7	-	2181	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	11	-5	11	0	multi-exon	FALSE	canonical	3	112	junction_13	34.9573373142001	280	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	NA	False	NA	NA	NA	30364408	30353135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
tx.17676	chr7	-	854	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	20	-4	2	0	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	265	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9277	False	NA	NA	False	NA	NA	NA	30428945	30427125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
tx.17677	chr7	-	943	6	FSM	ENSMUSG00000006315.10	ENSMUST00000209065.2	727	6	-216	0	3	0	multi-exon	FALSE	canonical	3	791	junction_1	3.48711915483254	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9260	False	NA	NA	False	NA	NA	NA	30428962	30427125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626
tx.17678	chr7	+	1115	7	Fusion	ENSMUSG00000097320.9_ENSMUSG00000046056.16	novel	1276	6	NA	NA	6	1	multi-exon	FALSE	canonical	1	1	junction_4	6.02771377334171	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTGGCTCACTGTGCTT	532	False	NA	NA	False	NA	NA	NA	30429009	30455557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_+_30429280_30431838_30432187_30434128_30434194_30435240_30435388_30454233_30454306_30454426_30454472_30455389
tx.17679	chr7	+	456	6	FSM	ENSMUSG00000074199.8	ENSMUST00000098559.3	470	6	2	12	2	0	multi-exon	FALSE	canonical	3	54	junction_5	10.9105453575887	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCTGAATCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	30487331	30490510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490344
tx.1768	chr10	-	1550	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-38	-2	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	NA	False	NA	NA	NA	80235294	80228374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
tx.17680	chr7	-	1681	2	FSM	ENSMUSG00000019429.8	ENSMUST00000094583.2	1625	2	-49	-7	-49	7	multi-exon	FALSE	canonical	3	35	junction_1	0	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATGTTTCCTTATCT	7617	False	NA	NA	False	NA	NA	NA	30555652	30553747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30555330_30555553
tx.17681	chr7	-	1168	4	ISM	ENSMUSG00000030577.15	ENSMUST00000189718.7	3672	13	10540	-2	5510	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0.471404520791032	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGTATTGGTGATTG	NA	False	NA	NA	False	NA	NA	NA	30567334	30565251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30566088_30566442_30566528_30566886_30567006_30567206
tx.17682	chr7	-	1347	7	ISM	ENSMUSG00000058239.14	ENSMUST00000171338.8	994	9	809	-586	-42	580	3prime_fragment	FALSE	canonical	3	80	junction_3	24.3064920454506	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGTGTGTCCATGTT	9619	False	NA	NA	False	NA	NA	NA	30655373	30645418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224
tx.17683	chr7	-	2125	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-453	747	-453	579	multi-exon	TRUE	canonical	3	69	junction_9	26.650458036969	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTGTGTGTCCATGT	8311	False	NA	NA	False	NA	NA	NA	30656681	30645419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
tx.17684	chr7	-	2122	10	FSM	ENSMUSG00000001247.17	ENSMUST00000001279.15	2167	10	45	0	-4	0	multi-exon	TRUE	canonical	3	74	junction_7	47.1029867208513	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	30672844	30657199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
tx.17685	chr7	-	2073	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	0	-2	0	0	multi-exon	FALSE	canonical	3	93	junction_6	34.291945118351	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	30672852	30657199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
tx.17686	chr7	-	1569	6	FSM	ENSMUSG00000019194.16	ENSMUST00000098548.8	1573	6	3	1	3	-1	multi-exon	FALSE	canonical	3	16	junction_5	3.38230690505755	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTATTCTCTCATTAA	NA	False	NA	NA	False	NA	NA	NA	30826425	30815949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30816562_30816648_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
tx.17687	chr7	-	1684	5	FSM	ENSMUSG00000019194.16	ENSMUST00000211945.2	1501	5	-183	0	-24	0	multi-exon	FALSE	canonical	3	16	junction_4	3.69966214673719	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATTCTCTCATTAAC	NA	False	NA	NA	False	NA	NA	NA	30826452	30815948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
tx.17688	chr7	-	2756	18	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	92.7901229679928	17	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5709	False	NA	NA	False	NA	NA	NA	30850484	30829551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
tx.17689	chr7	-	2668	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	76.1130101324254	146	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5726	False	NA	NA	False	NA	NA	NA	30850467	30829551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
tx.1769	chr10	-	1558	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105348.8	1222	7	-36	-300	-36	0	multi-exon	FALSE	canonical	3	94	junction_5	422.225617676406	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80235292	80228372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80235051
tx.17690	chr7	-	3752	17	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_15	75.5900745799341	71	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5721	False	NA	NA	False	NA	NA	NA	30850472	30829551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
tx.17691	chr7	-	1971	8	FSM	ENSMUSG00000036459.16	ENSMUST00000038537.9	1962	8	-11	2	-11	-2	multi-exon	FALSE	canonical	3	249	junction_5	31.7027005866976	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCATGGTGGTTATTTC	NA	False	NA	NA	False	NA	NA	NA	33832704	33808969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
tx.17692	chr7	-	2115	7	FSM	ENSMUSG00000036459.16	ENSMUST00000140911.4	968	7	-466	-681	-16	-2	multi-exon	FALSE	canonical	3	259	junction_4	28.1286725997197	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCATGGTGGTTATTTC	NA	False	NA	NA	False	NA	NA	NA	33832709	33808969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818632_33824909_33825012_33831913
tx.17693	chr7	-	2552	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	21	6	21	-6	multi-exon	FALSE	canonical	0	0	junction_4	386.788858543974	1674	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTGTTGCCCTAGT	NA	False	NA	NA	False	NA	NA	NA	33867979	33840118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
tx.17694	chr7	-	4071	6	NIC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	-3	1	intron_retention	FALSE	canonical	3	713	junction_1	37.7232024091275	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTGTTTACCTTATT	5729	False	NA	NA	False	NA	NA	NA	33896089	33884056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_33884237_33885718_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
tx.17695	chr7	-	1169	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	-8	134	-8	0	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	335	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTTTACCTTAT	5724	False	NA	NA	False	NA	NA	NA	33896094	33884057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
tx.17696	chr7	-	2036	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	45	803	-2	26	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	2060	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCAGTACTTTTATCT	NA	False	NA	NA	False	NA	NA	NA	33929716	33901557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
tx.17697	chr7	+	4252	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	-76	-1	-76	1	multi-exon	FALSE	canonical	3	45	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	33933725	33939633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_33933921_33935576
tx.17698	chr7	-	2977	4	ISM	ENSMUSG00000066571.14	ENSMUST00000085592.6	5798	13	43131	-7	2648	0	3prime_fragment	FALSE	canonical	3	151	junction_3	1.69967317119759	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	3195	False	NA	NA	False	NA	NA	NA	33941893	33936131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664
tx.17699	chr7	-	6161	13	FSM	ENSMUSG00000066571.14	ENSMUST00000085592.6	5798	13	-356	-7	-356	0	multi-exon	FALSE	canonical	3	102	junction_10	17.4664360671801	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	NA	False	NA	NA	False	NA	NA	NA	33985380	33936131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126
tx.177	chr1	+	2257	5	ISM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	43	-3	-4	0	intron_retention	FALSE	canonical	3	315	junction_1	77.3413699128739	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	37469262	37478068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457
tx.1770	chr10	-	1571	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	91	0	-37	0	multi-exon	FALSE	canonical	3	303	junction_6	355.847657791302	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80235293	80228372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
tx.17700	chr7	-	6215	14	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_13	26.7307415605834	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	9812	False	NA	NA	False	NA	NA	NA	34012972	33936131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
tx.17701	chr7	-	2745	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	31	9	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	198.945615746342	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGGTTTTTGTTAAC	NA	False	NA	NA	False	NA	NA	NA	34089081	34044061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34065039_34065163_34070479_34070610_34074653_34074818_34088782
tx.17702	chr7	-	2944	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-2	2	-2	-2	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	663	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTAACTATTTTGG	NA	False	NA	NA	False	NA	NA	NA	34089114	34044072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
tx.17703	chr7	-	2860	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	19	-8	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	198.720599191956	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAATATTTTTAACTA	NA	False	NA	NA	False	NA	NA	NA	34089093	34044078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_34045384_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
tx.17704	chr7	-	3501	6	FSM	ENSMUSG00000030499.10	ENSMUST00000108070.9	2409	6	-1092	0	460	0	multi-exon	TRUE	canonical	3	27	junction_2	6.01996677731696	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGGCTCCGTCCTGTG	7268	False	NA	NA	False	NA	NA	NA	34353354	34338439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008
tx.17705	chr7	-	2417	7	FSM	ENSMUSG00000030499.10	ENSMUST00000108069.8	2407	7	-15	5	-15	0	multi-exon	FALSE	canonical	3	15	junction_6	8.78761755097605	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGAGGCTCCGTCC	6784	False	NA	NA	False	NA	NA	NA	34353838	34338443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34353671
tx.17706	chr7	-	2321	7	NNC	ENSMUSG00000030499.10	novel	2407	7	NA	NA	280	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.6065752079239	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGGCTCCGTCCTGTG	5968	False	NA	NA	False	NA	NA	NA	34354654	34338439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34354587
tx.17707	chr7	+	1850	15	FSM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	30	1	30	0	multi-exon	FALSE	canonical	3	282	junction_1	31.3925930429327	258	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTGCCCATCTTCCT	NA	False	NA	NA	False	NA	NA	NA	34611833	34744132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
tx.17708	chr7	-	3677	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	6	1026	6	-1026	multi-exon	FALSE	canonical	3	425	junction_1	0	459	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTTTTTCTTCGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	34755992	34746872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_34750358_34755800
tx.17709	chr7	-	4015	8	FSM	ENSMUSG00000001802.17	ENSMUST00000122409.8	4147	8	129	3	-77	-2	multi-exon	FALSE	canonical	3	19	junction_6	4.69041575982343	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCGGCTGTTCCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	34914794	34900305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
tx.1771	chr10	-	1652	6	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-42	0	intron_retention	FALSE	canonical	3	303	junction_5	389.715485963799	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80235298	80228372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
tx.17710	chr7	-	5668	7	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-87	-1	intron_retention	FALSE	canonical	3	19	junction_6	4.56131072780134	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGGCTGTTCCAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	34914804	34900304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34912613_34914280
tx.17711	chr7	-	3056	20	FSM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	9	0	9	0	multi-exon	FALSE	canonical	3	140	junction_17	13.3084023611853	272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCTTGATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	35017856	34975960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
tx.17712	chr7	+	3398	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	108	2	-52	-2	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTCTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	35033702	35091712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
tx.17713	chr7	-	1698	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	28	131	28	22	multi-exon	TRUE	canonical	3	143	junction_2	4.92160768674447	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACAATGAACATGACTT	NA	False	NA	NA	False	NA	NA	NA	35096233	35091707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
tx.17714	chr7	+	1399	12	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	4	959	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_11	38.1133585396715	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTCATCCCACGTTTT	NA	False	NA	NA	False	NA	NA	NA	35096483	35121618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35121492
tx.17715	chr7	+	2524	17	ISM	ENSMUSG00000023072.15	ENSMUST00000141704.8	2825	20	26	8231	6	-2118	5prime_fragment	FALSE	canonical	2	50	junction_16	33.5018073206506	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTGTCTGTACTCAGTG	NA	False	NA	NA	False	NA	NA	NA	35096485	35129881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
tx.17716	chr7	+	2601	19	FSM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	7	2	7	0	multi-exon	FALSE	canonical	2	65	junction_12	24.7032386540712	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	35096486	35138112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
tx.17717	chr7	-	1579	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	27	14	-25	-14	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	333	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATTCTTGCTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	35237143	35193050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
tx.17718	chr7	-	2775	11	NIC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-8	863	intron_retention	FALSE	canonical	3	378	junction_5	49.5177745865058	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTTTGTTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	35237126	35192170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
tx.17719	chr7	-	2008	11	Fusion	ENSMUSG00000100068.2_ENSMUSG00000030491.17	novel	769	6	NA	NA	-23	113	multi-exon	FALSE	canonical	3	19	junction_1	140.882362274346	16	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTGGTTAGTATTT	NA	False	NA	NA	False	NA	NA	NA	35237141	35196766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_-_35197571_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
tx.1772	chr10	-	415	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	30	0	-5	0	multi-exon	FALSE	canonical	3	4161	junction_1	104.5	514	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	False	NA	NA	False	NA	NA	NA	80242634	80238830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80238990_80239969_80240121_80242529
tx.17720	chr7	-	1831	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	460	7	460	-7	multi-exon	FALSE	canonical	3	351	junction_1	2	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAAGTTGTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	35255269	35246616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_35247549_35250878_35251087_35254578
tx.17721	chr7	+	1914	12	FSM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	0	12	0	-12	multi-exon	FALSE	canonical	3	240	junction_4	23.6388110621019	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGAGTGAATTTGAGTT	NA	False	NA	NA	False	NA	NA	NA	35285674	35308527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
tx.17722	chr7	+	4277	29	FSM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	6	1	0	-1	multi-exon	FALSE	canonical	3	207	junction_17	26.9819242214835	471	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	35285674	35338650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
tx.17723	chr7	-	625	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	27	32	10	0	multi-exon	FALSE	canonical	3	1740	junction_2	86.0883267348135	284	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGGGTGTTTCAGAAT	NA	False	NA	NA	False	NA	NA	NA	35346919	35341438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
tx.17724	chr7	-	4295	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	42	3669	-13	1891	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAGTTGATTAAAAT	NA	False	NA	NA	False	NA	NA	NA	35453837	35388258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
tx.17725	chr7	-	3411	18	NIC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	-13	1131	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	5.11933711106696	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCCCTCCCGCTCTTGC	NA	False	NA	NA	False	NA	NA	NA	35453837	35389018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
tx.17726	chr7	-	6699	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	-9	3	5	-3	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTTTCTAAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	35502423	35471770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
tx.17727	chr7	-	6806	8	NNC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.3542751466929	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTTTCTAAGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	35502399	35471769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35499232_35499363_35500862_35500954_35502258
tx.17728	chr7	-	5991	5	ISM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	7823	3	-1122	-3	3prime_fragment	FALSE	canonical	3	60	junction_1	4.43705983732471	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTTTCTAAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	35494591	35471770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947
tx.17729	chr7	-	6599	6	NIC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	25.6093732840146	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTTTCTAAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	35502414	35471770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35502258
tx.1773	chr10	-	2881	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105346.10	2839	19	-27	-15	-1	15	multi-exon	FALSE	canonical	3	458	junction_2	257.439271275891	301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCGTCATATTTCATGG	NA	False	NA	NA	False	NA	NA	NA	80269482	80245426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
tx.17730	chr7	-	4592	6	FSM	ENSMUSG00000044452.11	ENSMUST00000187282.3	944	6	-26	-3622	-4	-9	multi-exon	FALSE	canonical	3	8	junction_4	23.3957261054236	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCACTTGTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	35502418	35471776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35500862_35500954_35502258
tx.17731	chr7	+	1896	2	Antisense	novelGene_ENSMUSG00000043456.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCAACTTCTATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	37179205	37181236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_+_37179678_37179812
tx.17732	chr7	-	3351	11	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	48	junction_1	265.936383370159	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	NA	False	NA	NA	NA	37718972	37659417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_37661029_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
tx.17733	chr7	-	3413	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	145	junction_9	251.968251968378	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	NA	False	NA	NA	NA	37718975	37659417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
tx.17734	chr7	-	3448	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-9	2	-9	-1	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	1030	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAGCCTGCTTTATC	NA	False	NA	NA	False	NA	NA	NA	37718976	37659418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
tx.17735	chr7	-	1868	12	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	279	0	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_11	244.136054738215	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	False	NA	NA	False	NA	NA	NA	37806648	37797408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806567
tx.17736	chr7	-	1987	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	13	0	13	0	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	356	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	False	NA	NA	False	NA	NA	NA	37806946	37797408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
tx.17737	chr7	+	2160	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	146	976	-49	0	multi-exon	FALSE	canonical	3	43	junction_1	1.5	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTCATATCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	37883223	37896016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_37883325_37888030_37888202_37894128
tx.17738	chr7	-	1537	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	25	3701	25	-3701	multi-exon	FALSE	canonical	3	140	junction_1	0	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGATTGTTAAGAGT	NA	False	NA	NA	False	NA	NA	NA	37927415	37920096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_37921583_37927364
tx.17739	chr7	-	1237	7	FSM	ENSMUSG00000030423.8	ENSMUST00000032585.8	2113	7	48	828	-2	-828	multi-exon	FALSE	canonical	3	243	junction_2	18.1567251085284	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	NA	False	NA	NA	NA	37970799	37962247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968325_37968379_37970570
tx.1774	chr10	-	2918	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	-1	33	-1	0	multi-exon	TRUE	canonical	3	747	junction_5	176.383700711101	525	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	NA	False	NA	NA	NA	80269482	80245380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
tx.17740	chr7	+	3540	6	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2051	1501	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.58483105326173	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAATTACTTTCATTAT	NA	False	NA	NA	False	NA	NA	NA	39136810	39149726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_39136985_39138848_39138976_39139461_39139541_39143154_39143248_39145691_39145802_39146769
tx.17741	chr7	+	5219	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	-22	10824	-21	4555	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	39201902	39219189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
tx.17742	chr7	-	2760	4	FSM	ENSMUSG00000056383.11	ENSMUST00000071804.10	2671	4	-89	0	30	0	multi-exon	FALSE	canonical	3	26	junction_3	27.3901847788988	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	41042773	41022346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41042650
tx.17743	chr7	-	2904	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	31	-864	31	-3	multi-exon	FALSE	canonical	3	47	junction_4	16.2845785944863	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTTTTTTCTGACT	NA	False	NA	NA	False	NA	NA	NA	41042772	41022349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
tx.17744	chr7	-	3478	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	476	-543	-6	543	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCCACTTTCTGAGC	NA	False	NA	NA	False	NA	NA	NA	41148838	41127754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
tx.17745	chr7	-	5828	4	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-4	4380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	110.605404730309	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATAATCTGGCTGTACT	NA	False	NA	NA	False	NA	NA	NA	41210257	41190717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_41196224_41197139_41197201_41197407_41197549_41210137
tx.17746	chr7	-	2830	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	-6	-1394	-6	1394	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTTCTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	41210259	41193703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
tx.17747	chr7	+	4105	7	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	76.9518247563587	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGGGTAATGAATTTC	NA	False	NA	NA	False	NA	NA	NA	41248681	41277956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
tx.17748	chr7	+	4000	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	3	1	3	-1	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGGGTAATGAATTTC	NA	False	NA	NA	False	NA	NA	NA	41248687	41277956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
tx.17749	chr7	-	4089	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	-16	-4	-2	4	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACTGCTGTCTTGGGA	NA	False	NA	NA	False	NA	NA	NA	42155166	42122805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
tx.1775	chr10	-	2875	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	-13	-33	-1	15	multi-exon	FALSE	canonical	3	581	junction_5	199.277305392371	255	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCGTCATATTTCATGG	NA	False	NA	NA	False	NA	NA	NA	80269482	80245426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
tx.17750	chr7	-	4029	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-9	5	combination_of_known_junctions	FALSE	canonical	3	125	junction_5	88.2813683627525	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGCTGTCTTGGGAT	NA	False	NA	NA	False	NA	NA	NA	42155173	42122804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42155033
tx.17751	chr7	-	3688	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	-11	-2252	-11	2252	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTCTTATCT	NA	False	NA	NA	False	NA	NA	NA	42241982	42226954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
tx.17752	chr7	-	3561	3	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	-11	2252	multi-exon	FALSE	canonical	3	30	junction_2	106	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTCTTATCT	NA	False	NA	NA	False	NA	NA	NA	42241982	42226954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_-_42230333_42232070_42232132_42241860
tx.17753	chr7	-	5024	4	FSM	ENSMUSG00000074158.10	ENSMUST00000098503.9	1976	4	-50	-2998	-9	20	multi-exon	FALSE	canonical	3	68	junction_3	11.7284080571728	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCTGAGTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	42292021	42258929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_42263648_42265396_42265458_42265656_42265784_42291903
tx.17754	chr7	-	3066	3	NIC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	158	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	42342187	42309528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_42312421_42314181_42314243_42342074
tx.17755	chr7	-	3191	4	FSM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	-45	2	-21	-2	multi-exon	FALSE	canonical	3	231	junction_3	55.1784982277215	383	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGGCGTGTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	42342187	42309530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_42312421_42314181_42314243_42314441_42314569_42342074
tx.17756	chr7	-	5728	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11973	2007	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	18	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	42388414	42352885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
tx.17757	chr7	-	4348	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-5	11	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	72.2787812723916	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAATTTGTTTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	42516663	42466241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_42470287_42471782_42471844_42472041_42472168_42516547
tx.17758	chr7	-	4185	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	86.8993670863028	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATTTGTTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	42516657	42466242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_42470028_42470526_42470630_42471782_42471844_42472041_42472168_42516547
tx.17759	chr7	-	5848	3	NIC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-10	10	intron_retention	FALSE	canonical	3	126	junction_2	42.5	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATTTGTTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	42516668	42466242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_42471844_42472041_42472168_42516547
tx.1776	chr10	-	3645	14	ISM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	11068	735	-1030	4	3prime_fragment	FALSE	canonical	3	315	junction_13	33.5269916872605	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9055	False	NA	NA	False	NA	NA	NA	80386326	80377493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166
tx.17760	chr7	-	4090	4	FSM	ENSMUSG00000092225.2	ENSMUST00000174558.2	4073	4	-10	-7	-10	7	multi-exon	FALSE	canonical	3	126	junction_3	34.9888871246603	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAGTAATTTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	42516668	42466245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_42470028_42471782_42471844_42472041_42472168_42516547
tx.17761	chr7	-	8878	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-11	4686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.3752845215117	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGCCCAACTTCTGGCCC	NA	False	NA	NA	False	NA	NA	NA	42516669	42461566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_42470028_42470178_42470287_42471782_42471844_42472041_42472168_42516547
tx.17762	chr7	+	5658	4	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	-9	2816	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	124	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTGATGGTTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	42727465	42752083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
tx.17763	chr7	+	2962	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	-6	156	-6	-156	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCCAGTGCATTTGCC	NA	False	NA	NA	False	NA	NA	NA	42827005	42841377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
tx.17764	chr7	+	1974	5	FSM	ENSMUSG00000074887.5	ENSMUST00000205748.2	1492	5	-13	-469	-13	469	multi-exon	FALSE	canonical	3	31	junction_2	99.780697031039	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCCCATGCATTTGCCC	9985	False	NA	NA	False	NA	NA	NA	42863449	42876735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_42863572_42870265_42870330_42872998_42873126_42873324_42873386_42875135
tx.17765	chr7	+	2081	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-12	-641	-12	641	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGGTATTTTCCTCATT	9986	False	NA	NA	False	NA	NA	NA	42863450	42876907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
tx.17766	chr7	+	3346	3	NNC	ENSMUSG00000074887.5	novel	1386	3	NA	NA	-12	16698	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGACAGGTATGCCTC	9986	False	NA	NA	False	NA	NA	NA	42863450	42892964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_42863572_42884606_42884794_42889926
tx.17767	chr7	+	2679	4	Intergenic	novelGene_355	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	80.425258608364	49	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGTATTGACATTTT	NA	False	NA	NA	False	NA	NA	NA	42903159	42915069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_+_42903292_42910109_42910237_42910431_42910493_42912710
tx.17768	chr7	+	2784	5	Intergenic	novelGene_356	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_1	56.6629287982893	92	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGTATTGACATTTT	NA	False	NA	NA	False	NA	NA	NA	42903168	42915069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_+_42903292_42906867_42906982_42910109_42910237_42910431_42910493_42912710
tx.17769	chr7	-	4086	5	NNC	ENSMUSG00000012640.17	novel	4184	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	35.7657308047802	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	NA	False	NA	NA	NA	42962522	42945946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962468
tx.1777	chr10	-	4772	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	98.9900273270196	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTCATAGTGTGTGGT	9430	False	NA	NA	False	NA	NA	NA	80397385	80377495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
tx.17770	chr7	-	4149	5	NNC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	37.0607609204128	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTGTTCATATTGCTT	NA	False	NA	NA	False	NA	NA	NA	42962521	42945947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962468
tx.17771	chr7	-	4200	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	-16	0	-8	0	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	NA	False	NA	NA	NA	42962695	42945946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
tx.17772	chr7	-	4265	5	NIC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	30.589009464185	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	NA	False	NA	NA	NA	42962695	42945946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962527
tx.17773	chr7	+	1588	2	FSM	ENSMUSG00000118553.2	ENSMUST00000239023.2	558	2	-27	-1003	-27	1003	multi-exon	FALSE	canonical	3	10	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTGTGTGGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	43077082	43079259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43077145_43077733
tx.17774	chr7	+	833	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	41	19	5	0	multi-exon	FALSE	canonical	3	1745	junction_1	117.194539121923	546	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGCCTCTTTCCTCAT	1949	False	NA	NA	False	NA	NA	NA	43093547	43107205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
tx.17775	chr7	+	3311	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	-1	1184	-1	-1184	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGCTGGATAGTAATA	7266	False	NA	NA	False	NA	NA	NA	43229032	43241475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
tx.17776	chr7	+	2416	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-57	3	-1	-3	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCCACATTCATCCAT	2835	False	NA	NA	False	NA	NA	NA	43256591	43267706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
tx.17777	chr7	+	2220	4	FSM	ENSMUSG00000055102.16	ENSMUST00000120935.2	2156	4	-1	-63	-1	-6	multi-exon	FALSE	canonical	2	5	junction_1	36.4630711207319	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATACCCACATTCATC	2835	False	NA	NA	False	NA	NA	NA	43256591	43267703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43256699_43261406_43261534_43261970_43262064_43265810
tx.17778	chr7	+	2449	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATACCCACATTCATC	2842	False	NA	NA	False	NA	NA	NA	43256598	43267703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
tx.17779	chr7	+	2475	3	FSM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	1	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTTTGGTCTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	43321439	43327722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43321500_43324527_43325071_43325850
tx.1778	chr10	-	4587	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	11	4	intron_retention	FALSE	canonical	3	315	junction_12	36.5310923742936	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9432	False	NA	NA	False	NA	NA	NA	80397383	80377493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
tx.17780	chr7	+	2418	2	ISM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	3085	0	3085	0	3prime_fragment	FALSE	canonical	3	66	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTTTGGTCTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	43324524	43327722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_43325071_43325850
tx.17781	chr7	+	2358	5	ISM	ENSMUSG00000054046.8	ENSMUST00000066834.8	1809	6	523	15	-309	-15	3prime_fragment	FALSE	canonical	3	49	junction_2	9.8488578017961	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTCCTTGCTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	43362513	43376943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
tx.17782	chr7	+	1783	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-263	-14	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	15.8694675399019	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCCTTGCTTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	43362559	43376944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
tx.17783	chr7	+	1381	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	-8	0	-8	0	multi-exon	FALSE	canonical	2	31	junction_4	14.5134420452214	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAATGTGTGTGCCTCT	347	False	NA	NA	False	NA	NA	NA	43430450	43434834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
tx.17784	chr7	+	896	5	FSM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	57	1	-21	-1	multi-exon	FALSE	canonical	3	34	junction_1	17.0934929139717	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAAGTTCTGACATTCT	NA	False	NA	NA	False	NA	NA	NA	43874840	43879041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334_43878472_43878837
tx.17785	chr7	-	1135	4	NIC	ENSMUSG00000038782.8	novel	1306	5	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	1.24721912892465	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTCAGTATCTGACT	NA	False	NA	NA	False	NA	NA	NA	43896084	43879356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_43880066_43880749_43880897_43881779_43881981_43896006
tx.17786	chr7	+	2065	7	FSM	ENSMUSG00000045411.17	ENSMUST00000185481.7	759	7	32	-1338	-1	0	multi-exon	FALSE	canonical	3	30	junction_1	300.418411922808	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896209	43901739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43896233_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.17787	chr7	+	3150	6	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_1	301.065707113912	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTGTGCTGTTTGATT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.17788	chr7	+	2077	7	FSM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	52	2	0	0	multi-exon	FALSE	canonical	3	44	junction_1	296.487211641019	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43896233_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.17789	chr7	+	1913	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	65	4	0	0	multi-exon	FALSE	canonical	3	217	junction_1	215.342889364845	223	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.1779	chr10	-	4505	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	10	735	10	4	multi-exon	FALSE	canonical	3	315	junction_13	35.2049393566022	536	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9431	False	NA	NA	False	NA	NA	NA	80397384	80377493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
tx.17790	chr7	+	3614	4	FSM	ENSMUSG00000045411.17	ENSMUST00000107949.8	3610	4	1	-5	1	0	multi-exon	FALSE	canonical	3	709	junction_3	48.6095555306659	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	NA	False	NA	NA	NA	43896211	43901741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732
tx.17791	chr7	+	2242	8	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	327.388554024301	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_43896248_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.17792	chr7	+	1898	6	FSM	ENSMUSG00000045411.17	ENSMUST00000137702.8	784	6	59	-1173	0	0	multi-exon	FALSE	canonical	3	108	junction_1	258.311904487579	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43896233_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.17793	chr7	+	3341	5	FSM	ENSMUSG00000045411.17	ENSMUST00000107950.9	3336	5	-2	-3	0	0	multi-exon	FALSE	canonical	3	709	junction_3	44.6933999601731	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.17794	chr7	+	4860	3	FSM	ENSMUSG00000045411.17	ENSMUST00000071296.11	4201	3	-654	-5	1	0	multi-exon	FALSE	canonical	3	709	junction_2	56.5	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	NA	False	NA	NA	NA	43896211	43901741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43899024_43899444_43899484_43899732
tx.17795	chr7	+	4586	4	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	709	junction_2	50.8745734352852	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896211	43901739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_43899024_43899444_43899484_43899732_43899765_43900036
tx.17796	chr7	+	2227	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	337.565594532744	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTGTGCTGTTTGATT	NA	False	NA	NA	False	NA	NA	NA	43896211	43901740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_43896233_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.17797	chr7	-	1526	4	FSM	ENSMUSG00000008028.16	ENSMUST00000137946.2	973	4	-497	-56	19	0	multi-exon	FALSE	canonical	3	16	junction_3	6.79869268479038	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCTCTCGGCAAAGT	NA	False	NA	NA	False	NA	NA	NA	44024435	44009466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44009806_44010473_44010608_44012075_44012440_44023746
tx.17798	chr7	+	2490	11	FSM	ENSMUSG00000030731.14	ENSMUST00000118962.8	2494	11	4	0	4	0	multi-exon	FALSE	canonical	2	9	junction_1	3.88458491991101	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCACCTGTCTCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	44033529	44049453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44033601_44034229_44034374_44035379_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
tx.17799	chr7	+	873	5	FSM	ENSMUSG00000038695.14	ENSMUST00000118628.8	864	5	-5	-4	1	0	multi-exon	FALSE	canonical	3	36	junction_1	14.4460202131937	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGGGCTCAGCTC	4802	False	NA	NA	False	NA	NA	NA	44117463	44121076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44117615_44118230_44118394_44119835_44119962_44120536_44120732_44120838
tx.178	chr1	+	1065	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	32	-3	1	0	multi-exon	FALSE	canonical	3	315	junction_1	76.7739539166767	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	37469251	37478068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
tx.1780	chr10	-	4529	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	98.8862467480608	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9431	False	NA	NA	False	NA	NA	NA	80397384	80377493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
tx.17800	chr7	-	1695	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	-45	12	12	-12	multi-exon	FALSE	canonical	3	258	junction_1	346.110162950988	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	44145875	44139546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
tx.17801	chr7	-	1608	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	62	185	12	-12	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	698	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	44145875	44139546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
tx.17802	chr7	-	3408	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	43	3	34	0	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	1386	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	44198228	44182172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
tx.17803	chr7	-	1986	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107911.8	1988	10	1	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_9	219.110209599227	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGAGCCCAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	44203371	44199041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203232
tx.17804	chr7	-	1991	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107910.8	1948	10	-25	-18	0	0	multi-exon	FALSE	canonical	0	0	junction_9	233.829683717988	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	NA	False	NA	NA	NA	44203372	44199040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202182_44203002_44203133_44203232
tx.17805	chr7	-	2257	9	FSM	ENSMUSG00000060601.14	ENSMUST00000123358.9	1853	9	-36	-368	1	0	multi-exon	TRUE	canonical	0	0	junction_8	201.405336014218	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	NA	False	NA	NA	NA	44203371	44199040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002_44203133_44203232
tx.17806	chr7	-	1995	10	FSM	ENSMUSG00000060601.14	ENSMUST00000073488.12	1999	10	2	2	1	-1	multi-exon	FALSE	canonical	0	0	junction_9	207.457626195488	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGAGCCCAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	44203371	44199041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
tx.17807	chr7	-	1998	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	224.012290227209	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGAGCCCAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	44203371	44199041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203232
tx.17808	chr7	-	2257	9	NIC	ENSMUSG00000060601.14	novel	1948	10	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_8	224.141696254847	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCCTGAGCCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	44203371	44199043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202182_44203002_44203133_44203232
tx.17809	chr7	-	2092	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	241.126522804937	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCCTGAGCCCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	44203371	44199042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201768_44201930_44202045_44202120_44202179_44203002_44203133_44203232
tx.1781	chr10	-	4525	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	11	4	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	101.704177868554	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9432	False	NA	NA	False	NA	NA	NA	80397383	80377493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380729_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
tx.17810	chr7	-	1577	7	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-29	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_6	26.7669987526099	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	44263578	44255226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263266
tx.17811	chr7	-	3763	5	FSM	ENSMUSG00000048012.20	ENSMUST00000140599.9	1006	5	220	-2977	-80	-2	multi-exon	FALSE	canonical	3	48	junction_2	7.63216876123687	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCTATTTTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	44397553	44380905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397333
tx.17812	chr7	-	3757	5	NIC	ENSMUSG00000048012.20	novel	3559	5	NA	NA	-77	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	16.8077363139716	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCTATTTTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	44397550	44380905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397333
tx.17813	chr7	-	3588	5	FSM	ENSMUSG00000048012.20	ENSMUST00000120798.8	3559	5	-12	-17	-12	5	multi-exon	FALSE	canonical	2	7	junction_4	24.8633766813762	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACTGGCTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	44397827	44380909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397775
tx.17814	chr7	-	3598	5	FSM	ENSMUSG00000048012.20	ENSMUST00000060270.13	3800	5	211	-9	-15	-2	multi-exon	FALSE	canonical	2	7	junction_4	22.9605640174626	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCTATTTTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	44397830	44380905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397775
tx.17815	chr7	+	1763	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	206	0	-17	0	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGTTCAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	44398042	44426939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
tx.17816	chr7	-	1813	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	2	1	2	0	multi-exon	FALSE	canonical	3	52	junction_1	35.5	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	9688	False	NA	NA	False	NA	NA	NA	44466080	44461680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44462945_44464412_44464707_44465825
tx.17817	chr7	+	2455	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	265	2	-30	1	multi-exon	FALSE	canonical	3	986	junction_1	0	1685	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCTGTGAGTATGGGT	340	False	NA	NA	False	NA	NA	NA	44465776	44480234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44465908_44477910
tx.17818	chr7	-	2169	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	174	6407	-6	2	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	173	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTGGCTGGCATCAGGAC	7877	False	NA	NA	False	NA	NA	NA	44498325	44490453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
tx.17819	chr7	+	1694	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	-106	4	-106	0	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCGTGTTGTGTGTGAGT	1294	False	NA	NA	False	NA	NA	NA	44498541	44504841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
tx.1782	chr10	-	2747	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	-71	-2	-71	2	multi-exon	FALSE	canonical	3	135	junction_1	0	251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTCTGTCTGTCTGAT	8635	False	NA	NA	False	NA	NA	NA	80413226	80402955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80405057_80412580
tx.17820	chr7	+	1512	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	328	-680	-50	-1	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCGTGTTGTGTGTGAG	2133	False	NA	NA	False	NA	NA	NA	44499380	44504840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
tx.17821	chr7	+	4048	4	ISM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	762	4	-21	0	3prime_fragment	FALSE	canonical	3	274	junction_1	24.1246761636296	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCGTGTTGTGTGTGAGT	2162	False	NA	NA	False	NA	NA	NA	44499409	44504841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_44502384_44503203_44503282_44503362_44503533_44504015
tx.17822	chr7	+	1772	17	FSM	ENSMUSG00000002963.18	ENSMUST00000107876.8	1770	17	-2	0	-2	0	multi-exon	FALSE	canonical	3	28	junction_1	53.8118466859297	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9313	False	NA	NA	False	NA	NA	NA	44506560	44512074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44506727_44506818_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
tx.17823	chr7	+	1677	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	165	342	-16	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9500	False	NA	NA	False	NA	NA	NA	44506747	44512074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
tx.17824	chr7	-	1593	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	106	0	combination_of_known_junctions	FALSE	canonical	3	386	junction_1	117.813647577671	277	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5546	False	NA	NA	False	NA	NA	NA	44519106	44512491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
tx.17825	chr7	-	1767	12	FSM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	116	0	116	0	multi-exon	FALSE	canonical	3	715	junction_7	41.0738097969944	404	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5556	False	NA	NA	False	NA	NA	NA	44519096	44512491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
tx.17826	chr7	-	2734	17	FSM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	-51	-5	0	-2	multi-exon	FALSE	canonical	3	744	junction_8	64.3087948398195	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6950	False	NA	NA	False	NA	NA	NA	44541841	44528809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
tx.17827	chr7	-	2322	18	FSM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	295	2	0	-2	multi-exon	FALSE	canonical	3	744	junction_9	66.5493546850497	1082	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6950	False	NA	NA	False	NA	NA	NA	44541841	44528809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
tx.17828	chr7	-	2245	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	203.468018064265	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6955	False	NA	NA	False	NA	NA	NA	44541836	44528809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
tx.17829	chr7	+	1685	11	FSM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	12	1	-2	-1	multi-exon	FALSE	canonical	3	81	junction_5	12.7373466624725	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	NA	False	NA	NA	NA	44545514	44550047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
tx.1783	chr10	-	4573	4	ISM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	39	0	13	0	intron_retention	TRUE	canonical	3	372	junction_3	33.2565782966318	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7837	False	NA	NA	False	NA	NA	NA	80426136	80419487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348
tx.17830	chr7	+	1485	10	FSM	ENSMUSG00000011658.17	ENSMUST00000209039.2	1453	10	-13	-19	0	-1	multi-exon	FALSE	canonical	3	34	junction_5	26.1448954015034	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	NA	False	NA	NA	NA	44545516	44550047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
tx.17831	chr7	-	3375	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	144.442358888666	1656	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	NA	False	NA	NA	NA	44578913	44549797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
tx.17832	chr7	-	2742	19	FSM	ENSMUSG00000007783.11	ENSMUST00000063761.8	2793	19	52	-1	-21	0	multi-exon	FALSE	canonical	3	39	junction_13	17.8819862459058	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	2716	False	NA	NA	False	NA	NA	NA	44624223	44608795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
tx.17833	chr7	-	1254	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	125	768	-11	1	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	2236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTCTCGCCCTGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	44635791	44626180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
tx.17835	chr7	-	1079	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	-4	0	-4	0	multi-exon	FALSE	canonical	3	119	junction_2	18.8473399243029	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	44647007	44640645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
tx.17836	chr7	-	983	6	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	59.7943141109587	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCCGAAAGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	44647007	44640649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44640879_44642167_44642456_44643786_44643874_44645967_44646111_44646301_44646417_44646886
tx.17837	chr7	+	1649	7	FSM	ENSMUSG00000003184.16	ENSMUST00000207555.2	1641	7	-20	12	3	0	multi-exon	FALSE	canonical	3	134	junction_1	17.7458915433028	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	NA	False	NA	NA	NA	44647092	44651813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
tx.17838	chr7	+	1566	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	7	458	7	0	multi-exon	TRUE	canonical	3	81	junction_5	29.0601066054199	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	NA	False	NA	NA	NA	44647078	44651814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
tx.17839	chr7	-	4141	11	FSM	ENSMUSG00000038406.18	ENSMUST00000211735.2	4209	11	68	0	68	0	multi-exon	FALSE	canonical	0	0	junction_10	69.4230509269075	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	7081	False	NA	NA	False	NA	NA	NA	44663760	44652371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628
tx.1784	chr10	-	1440	5	FSM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	28	0	2	0	multi-exon	FALSE	canonical	3	337	junction_4	42.7631558704453	372	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7826	False	NA	NA	False	NA	NA	NA	80426147	80419487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422865_80426008
tx.17840	chr7	-	4764	12	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	45	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	85.2363752714854	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTAGTGGTGTACCCT	5331	False	NA	NA	False	NA	NA	NA	44665510	44652369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44664888
tx.17841	chr7	-	4010	10	ISM	ENSMUSG00000038406.18	ENSMUST00000211735.2	4209	11	810	0	-33	0	3prime_fragment	FALSE	canonical	3	182	junction_5	29.3371209675842	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	7823	False	NA	NA	False	NA	NA	NA	44663018	44652371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903
tx.17842	chr7	-	2995	5	ISM	ENSMUSG00000038406.18	ENSMUST00000211735.2	4209	11	5959	0	5116	0	3prime_fragment	FALSE	canonical	3	212	junction_4	19.904459299363	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	7394	False	NA	NA	False	NA	NA	NA	44657869	44652371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729
tx.17843	chr7	-	4178	12	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	81.4000426421802	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5300	False	NA	NA	False	NA	NA	NA	44665541	44652371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44665503
tx.17844	chr7	-	4048	11	FSM	ENSMUSG00000038406.18	ENSMUST00000085383.11	4293	11	245	0	13	0	multi-exon	FALSE	canonical	3	86	junction_10	46.9408137978029	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5299	False	NA	NA	False	NA	NA	NA	44665542	44652371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
tx.17845	chr7	+	980	6	FSM	ENSMUSG00000038387.10	ENSMUST00000044111.10	995	6	12	3	12	-3	multi-exon	FALSE	canonical	3	253	junction_4	17.1860408471527	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGATGCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	44667396	44671068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
tx.17846	chr7	-	2230	9	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	9430	138	-9057	-138	3prime_fragment	FALSE	canonical	3	23	junction_8	7.73688406272189	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGAGTGCTCTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	44692875	44677124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775
tx.17847	chr7	-	3128	10	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	6592	144	6592	-144	3prime_fragment	FALSE	canonical	3	21	junction_9	9.01849950564579	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCAGGCTGGAGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	44695713	44677130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146
tx.17848	chr7	-	5134	11	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	4143	138	4143	-138	3prime_fragment	FALSE	canonical	3	21	junction_9	9.28224110869784	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGAGTGCTCTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	44698162	44677124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262
tx.17849	chr7	-	1859	6	FSM	ENSMUSG00000046574.9	ENSMUST00000210410.2	1487	6	181	-553	181	-139	multi-exon	FALSE	canonical	3	41	junction_4	2.4	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGAGTGCTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	44683637	44677125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168
tx.1785	chr10	+	4294	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	intron_retention	TRUE	canonical	3	56	junction_1	229.039601136766	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	80438713	80451618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_80438784_80442147_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
tx.17850	chr7	-	1405	7	FSM	ENSMUSG00000007837.12	ENSMUST00000007981.9	1295	7	-81	-29	-27	0	multi-exon	FALSE	canonical	3	16	junction_5	9.01233722306385	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTCTGGGCGCATT	NA	False	NA	NA	False	NA	NA	NA	44711157	44703007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011
tx.17851	chr7	-	1187	6	FSM	ENSMUSG00000007837.12	ENSMUST00000209920.2	876	6	7	-318	7	-1	multi-exon	FALSE	canonical	3	12	junction_4	10.7962956610126	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCCTTTCTGGGCGCAT	NA	False	NA	NA	False	NA	NA	NA	44711122	44703008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44710164_44710317_44711011
tx.17852	chr7	+	1787	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	17	10	0	-10	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGCCAAATTCTTTG	3102	False	NA	NA	False	NA	NA	NA	44711896	44727624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
tx.17853	chr7	+	1704	9	FSM	ENSMUSG00000003421.14	ENSMUST00000107829.9	972	9	55	-787	-5	-7	multi-exon	FALSE	canonical	3	37	junction_6	164.802912595621	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCAAATTCTTTGTTG	3113	False	NA	NA	False	NA	NA	NA	44711907	44727627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
tx.17854	chr7	-	1442	7	FSM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	15	5	8	-5	multi-exon	FALSE	canonical	3	94	junction_6	35.1362427637839	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTCTGTCTGTCTGT	6675	False	NA	NA	False	NA	NA	NA	44741630	44732341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
tx.17855	chr7	-	1429	7	FSM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	19	5	12	-5	multi-exon	FALSE	canonical	3	54	junction_6	48.2482008875864	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTCTGTCTGTCTGT	6679	False	NA	NA	False	NA	NA	NA	44741626	44732341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
tx.17856	chr7	-	1632	7	FSM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	69	69	13	5	multi-exon	FALSE	canonical	3	66	junction_3	11.6583303550151	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCATCGTTATTCT	834	False	NA	NA	False	NA	NA	NA	44753206	44742482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063
tx.17857	chr7	-	588	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	67	6	-21	-6	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	4087	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGGCTTGGAGTCTCA	NA	False	NA	NA	False	NA	NA	NA	44773796	44771808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
tx.17858	chr7	-	434	2	ISM	ENSMUSG00000074129.15	ENSMUST00000210792.2	464	4	446	-5	104	4	3prime_fragment	FALSE	canonical	3	17594	junction_1	0	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCCTGCCCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	44775857	44775341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44775457_44775538
tx.17859	chr7	-	659	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	25	363	0	1	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	2461	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGGCCTGCCCTTC	NA	False	NA	NA	False	NA	NA	NA	44778160	44775344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
tx.1786	chr10	+	1802	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	3	-1	3	1	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	514	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	80438716	80451618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
tx.17860	chr7	-	2604	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	3	930	3	0	multi-exon	FALSE	canonical	3	349	junction_15	41.3256881370413	434	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9336	False	NA	NA	False	NA	NA	NA	44803994	44791258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
tx.17861	chr7	-	3542	16	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	0	1	intron_retention	FALSE	canonical	3	357	junction_11	39.9080053233545	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGGATGTGGGAACAG	9322	False	NA	NA	False	NA	NA	NA	44804008	44791257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44799191_44803815
tx.17862	chr7	+	1066	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	10	1	-1	0	multi-exon	FALSE	canonical	3	233	junction_1	50.5151242478703	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	NA	False	NA	NA	NA	44803736	44809488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
tx.17863	chr7	+	1175	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	10	0	10	0	multi-exon	FALSE	canonical	3	114	junction_1	85.8518678298646	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	NA	False	NA	NA	NA	44803747	44809488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
tx.17864	chr7	-	1177	11	ISM	ENSMUSG00000038292.15	ENSMUST00000121017.5	2262	20	14757	-4	-69	4	3prime_fragment	FALSE	canonical	3	35	junction_4	6.66033032213868	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATGATTTCCTCATCA	9336	False	NA	NA	False	NA	NA	NA	44839559	44833043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373
tx.17865	chr7	-	2029	20	NNC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	384	2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	15.2344557716802	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGGATGATTTCCTCAT	9462	False	NA	NA	False	NA	NA	NA	44853932	44833045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373_44839452_44842599_44842651_44842882_44843001_44843383_44843546_44843773_44843841_44844952_44845018_44845391_44845579_44845930_44846036_44849668_44849810_44853866
tx.17866	chr7	+	2089	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	43	8	5	1	multi-exon	FALSE	canonical	3	157	junction_1	60.1724793633042	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5473	False	NA	NA	False	NA	NA	NA	44865219	44883060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
tx.17867	chr7	+	2054	11	FSM	ENSMUSG00000030796.18	ENSMUST00000107801.10	3396	11	1359	-17	0	1	multi-exon	FALSE	canonical	3	317	junction_7	23.9883304963059	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	6888	False	NA	NA	False	NA	NA	NA	44866634	44883060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
tx.17868	chr7	-	1250	8	FSM	ENSMUSG00000030798.16	ENSMUST00000098461.10	1227	8	-13	-10	-13	10	multi-exon	FALSE	canonical	3	49	junction_1	15.6426940630769	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTAAAAATAGCTTTATT	4406	False	NA	NA	False	NA	NA	NA	44888277	44883045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
tx.17869	chr7	-	2578	6	FSM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	-29	-8	-4	3	multi-exon	FALSE	canonical	3	78	junction_5	4.63033476111609	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTGGTAAAAATAG	4415	False	NA	NA	False	NA	NA	NA	44888268	44883052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
tx.1787	chr10	+	1759	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	238.087285581477	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	80438725	80451618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_80438784_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
tx.17871	chr7	-	4059	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	-23	198	-12	-3	multi-exon	FALSE	canonical	3	102	junction_19	18.3832181168949	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACATGCTTGGCTCCTGT	3178	False	NA	NA	False	NA	NA	NA	44983216	44952776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
tx.17872	chr7	-	1765	8	ISM	ENSMUSG00000003863.19	ENSMUST00000211067.2	4565	30	23052	0	-2502	0	3prime_fragment	FALSE	canonical	3	8	junction_7	19.3422451897289	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	4484	False	NA	NA	False	NA	NA	NA	44993086	44988549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44992976
tx.17873	chr7	-	3236	3	ISM	ENSMUSG00000063511.12	ENSMUST00000209993.2	707	9	9280	-690	844	-3	3prime_fragment	FALSE	canonical	3	1406	junction_2	27	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGATGTCTTACTGC	NA	False	NA	NA	False	NA	NA	NA	45032465	45025879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_45026703_45026779_45026868_45030140
tx.17874	chr7	-	1712	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	17	6	-16	0	multi-exon	FALSE	canonical	3	1192	junction_9	143.840189098875	1346	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCATGTGATGTCTTAC	9058	False	NA	NA	False	NA	NA	NA	45045149	45025882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
tx.17875	chr7	+	1470	3	FSM	ENSMUSG00000074121.4	ENSMUST00000058879.8	1963	3	-25	518	-25	-518	multi-exon	FALSE	canonical	3	16	junction_1	4	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGGTATGTACTGTAA	612	False	NA	NA	False	NA	NA	NA	45063093	45066085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45063213_45064154_45064279_45064858
tx.17876	chr7	-	1509	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	327	-2	-19	1	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	1794	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	9509	False	NA	NA	False	NA	NA	NA	45083720	45071319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
tx.17877	chr7	+	3677	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	14	-13	14	13	multi-exon	TRUE	canonical	3	89	junction_1	61.1041369757855	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTCTTGTGGTGTGGTG	1041	False	NA	NA	False	NA	NA	NA	45084281	45106056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
tx.17878	chr7	+	2184	6	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	13031	0	144	0	3prime_fragment	FALSE	canonical	3	219	junction_3	11.2605506082074	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	NA	False	NA	NA	False	NA	NA	NA	45097298	45106043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
tx.17879	chr7	-	920	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	47	1	2	0	multi-exon	TRUE	canonical	3	56898	junction_1	7359.57672393974	5318	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	NA	False	NA	NA	NA	45109261	45107368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
tx.1788	chr10	+	2408	12	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-139	2	combination_of_known_junctions	FALSE	canonical	3	537	junction_4	57.9097331204578	669	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAATGTTGGCCTGGGCT	NA	False	NA	NA	False	NA	NA	NA	80458532	80476577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
tx.17880	chr7	-	2697	4	NIC	ENSMUSG00000003873.12	novel	1100	5	NA	NA	2	-3	intron_retention	FALSE	canonical	3	3184	junction_2	23.3666428910958	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATGGTCCCTTGTCCGC	9984	False	NA	NA	False	NA	NA	NA	45116253	45111123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_45112928_45114612_45114749_45115400_45115548_45115643
tx.17881	chr7	-	1271	5	FSM	ENSMUSG00000003873.12	ENSMUST00000210392.2	1100	5	-6	-165	-1	-5	multi-exon	FALSE	canonical	3	3046	junction_1	70.515955641259	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9976	False	NA	NA	False	NA	NA	NA	45116261	45111125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643
tx.17882	chr7	-	801	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	61	5	-1	-5	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	340	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9976	False	NA	NA	False	NA	NA	NA	45116261	45111125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
tx.17883	chr7	-	761	5	NIC	ENSMUSG00000003873.12	novel	867	6	NA	NA	-13	-5	combination_of_known_splicesites	FALSE	canonical	3	105	junction_4	1322.49735349452	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9964	False	NA	NA	False	NA	NA	NA	45116273	45111125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45116165
tx.17884	chr7	-	2350	12	ISM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	557	2421	466	229	3prime_fragment	FALSE	canonical	3	464	junction_7	38.5353760408741	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTGTGGCTCAGTTGGC	NA	False	NA	NA	False	NA	NA	NA	45159273	45142302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129
tx.17885	chr7	-	2432	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	0	2421	0	229	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	434	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTGTGGCTCAGTTGGC	NA	False	NA	NA	False	NA	NA	NA	45159830	45142302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
tx.17886	chr7	-	2043	2	FSM	ENSMUSG00000040435.13	ENSMUST00000167273.2	2809	2	767	-1	767	1	multi-exon	FALSE	canonical	3	424	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTCTTACGTGTGTTCT	4750	False	NA	NA	False	NA	NA	NA	45174803	45172344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45172747_45173162
tx.17887	chr7	-	2285	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	45	3	45	2	multi-exon	FALSE	canonical	3	356	junction_2	34	310	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTACGTGTGTTCTT	3906	False	NA	NA	False	NA	NA	NA	45175647	45172343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45172747_45173162_45174816_45175418
tx.17888	chr7	+	601	3	FSM	ENSMUSG00000040428.20	ENSMUST00000210797.2	646	3	45	0	-9	0	multi-exon	FALSE	canonical	3	5	junction_2	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	45199303	45203653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45199390_45202668_45202719_45203188
tx.17889	chr7	+	1356	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	37	7	-7	-4	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	NA	False	NA	NA	NA	45204353	45216738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
tx.1789	chr10	+	2490	11	FSM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	-140	-2	-140	2	multi-exon	FALSE	canonical	3	651	junction_8	40.2685981876698	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAATGTTGGCCTGGGCT	NA	False	NA	NA	False	NA	NA	NA	80458531	80476577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
tx.17890	chr7	+	1222	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3147	2	-15	-2	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACCTTGGAGTGGTCGT	NA	False	NA	NA	False	NA	NA	NA	45208614	45216740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
tx.17891	chr7	+	1580	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	190	2	-7	-1	multi-exon	TRUE	canonical	3	349	junction_4	47.8895604490164	158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGCTATCATGCTCTA	2445	False	NA	NA	False	NA	NA	NA	45219766	45239133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
tx.17892	chr7	+	2879	10	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	1004	1	1004	-1	3prime_fragment	FALSE	canonical	3	17	junction_1	24.3026188702086	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTTGTCAAGATTTGG	370	False	NA	NA	False	NA	NA	NA	45277915	45288516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_45278506_45279563_45279920_45281659_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
tx.17893	chr7	+	1819	8	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	4863	0	4863	0	3prime_fragment	FALSE	canonical	3	61	junction_1	11.5245965886278	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTGTCAAGATTTGGG	4229	False	NA	NA	False	NA	NA	NA	45281774	45288517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
tx.17894	chr7	-	3218	2	FSM	ENSMUSG00000110357.2	ENSMUST00000211533.2	1542	2	-26	-1650	-26	1650	multi-exon	FALSE	canonical	3	16	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTCTCTGTGTAGCCCT	9996	False	NA	NA	False	NA	NA	NA	45288215	45283453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45286563_45288106
tx.17895	chr7	-	2995	2	FSM	ENSMUSG00000055978.6	ENSMUST00000069800.6	2955	2	-40	0	-40	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGGTTTTTGTTTGCT	9475	False	NA	NA	False	NA	NA	NA	45315858	45298014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45300773_45315621
tx.17896	chr7	-	2499	5	NNC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	28	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.33853912601566	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCAATTGAGTGGGTTG	NA	False	NA	NA	False	NA	NA	NA	45343798	45327103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_45328949_45333603_45333716_45334118_45334170_45334689_45334780_45343397
tx.17897	chr7	-	2351	3	NIC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACCCAGCAATTGAGT	NA	False	NA	NA	False	NA	NA	NA	45343797	45327109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_45328949_45333603_45333716_45343397
tx.17898	chr7	+	1801	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	-14	50	-14	39	multi-exon	FALSE	canonical	3	28	junction_1	14.613540144522	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGCTGTTGTGGCGGA	NA	False	NA	NA	False	NA	NA	NA	45354497	45359577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
tx.17899	chr7	+	3758	2	FSM	ENSMUSG00000059824.13	ENSMUST00000211748.2	1732	2	-2022	-4	-6	4	multi-exon	FALSE	canonical	3	63	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCCCCACCTCCCTTG	NA	False	NA	NA	False	NA	NA	NA	45354505	45359456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45357896_45359088
tx.179	chr1	+	2468	5	ISM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	12	137	-4	0	intron_retention	FALSE	canonical	3	180	junction_1	134.998148135447	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	37469262	37478068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457
tx.1790	chr10	-	2449	9	FSM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	-6	6	-6	0	multi-exon	TRUE	canonical	3	325	junction_4	58.371118714652	622	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	NA	False	NA	NA	NA	80492334	80478456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
tx.17900	chr7	-	3126	6	ISM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	265	794	165	6	intron_retention	FALSE	canonical	3	87	junction_5	18.0554700852678	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTTTCAGTTATTGTG	3427	False	NA	NA	False	NA	NA	NA	45367161	45359684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416
tx.17901	chr7	-	2630	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	-47	-6	-47	6	multi-exon	FALSE	canonical	3	8	junction_5	47.003829631212	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTTTCAGTTATTGTG	3215	False	NA	NA	False	NA	NA	NA	45367373	45359684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
tx.17902	chr7	-	2990	6	FSM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	-5	-17	-5	-1	multi-exon	FALSE	canonical	3	46	junction_5	32.4678302324008	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	5952	False	NA	NA	False	NA	NA	NA	45364636	45359691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020
tx.17903	chr7	-	2686	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	61	801	-39	-1	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	3223	False	NA	NA	False	NA	NA	NA	45367365	45359691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
tx.17904	chr7	+	654	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	20	5	-8	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	866	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTCTGTGTTCATTC	5942	False	NA	NA	False	NA	NA	NA	45367514	45370254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
tx.17905	chr7	-	1559	12	FSM	ENSMUSG00000003269.18	ENSMUST00000107729.10	2519	12	13	947	4	25	multi-exon	FALSE	canonical	3	144	junction_4	92.1110540651432	199	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATGCCCTCATTTCTT	3175	False	NA	NA	False	NA	NA	NA	45463722	45457007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
tx.17906	chr7	-	2400	2	ISM	ENSMUSG00000058743.7	ENSMUST00000071937.7	2681	3	4762	2	3324	-2	3prime_fragment	TRUE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTTCTGTAGTAAG	5623	False	NA	NA	False	NA	NA	NA	45469444	45465885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_45467637_45468795
tx.17907	chr7	-	1904	7	FSM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	-9	3	-3	0	multi-exon	FALSE	canonical	3	447	junction_1	34.207292919623	384	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAAGTCCTCTGAGCTT	8625	False	NA	NA	False	NA	NA	NA	45480222	45474653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
tx.17908	chr7	+	1548	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	45	6	-8	-3	multi-exon	TRUE	canonical	3	208	junction_1	16.5378354085412	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTTGCTGTTCCCTG	3989	False	NA	NA	False	NA	NA	NA	45522240	45533150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
tx.17909	chr7	-	833	4	FSM	ENSMUSG00000040231.17	ENSMUST00000120299.4	722	4	-48	-63	-4	2	multi-exon	FALSE	canonical	3	35	junction_1	18.0616229121921	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCCTGTCTGTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	45546142	45536266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45536550_45538035_45538274_45545114_45545316_45546031
tx.1791	chr10	-	2467	9	NIC	ENSMUSG00000003344.15	novel	3026	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_4	127.904994038544	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	NA	False	NA	NA	NA	80492334	80478456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
tx.17910	chr7	-	965	5	FSM	ENSMUSG00000040231.17	ENSMUST00000039049.16	967	5	7	-5	7	5	multi-exon	FALSE	canonical	3	25	junction_2	22.466641938661	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTTCCTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	45546131	45536263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45536550_45536790_45536931_45538035_45538274_45545114_45545316_45546031
tx.17911	chr7	+	2230	8	FSM	ENSMUSG00000002781.20	ENSMUST00000069772.16	2297	8	67	0	67	0	multi-exon	FALSE	canonical	3	12	junction_1	17.4414472344658	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTAGTGTGGCTGC	5559	False	NA	NA	False	NA	NA	NA	45546431	45566837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
tx.17912	chr7	+	2141	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	332	-7	10	3	multi-exon	FALSE	canonical	3	48	junction_2	6.94422221866655	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTAGTGTGGCTGCAGG	5984	False	NA	NA	False	NA	NA	NA	45546856	45566840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
tx.17913	chr7	+	3118	2	NNC	ENSMUSG00000040189.19	novel	2928	4	NA	NA	-332	2992	intron_retention	FALSE	canonical	3	12	junction_1	0	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	2657	False	NA	NA	False	NA	NA	NA	45573163	45577483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_45574014_45575215
tx.17914	chr7	+	4218	31	FSM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	35	4	35	-4	multi-exon	FALSE	canonical	3	214	junction_14	37.3234510730184	380	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATAGTGTGGGGTGC	8128	False	NA	NA	False	NA	NA	NA	45683156	45733632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
tx.17915	chr7	-	1438	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	10	17	7	0	multi-exon	FALSE	canonical	3	75	junction_10	7.18609768928867	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTCCCTGGAGAACCC	NA	False	NA	NA	False	NA	NA	NA	46289221	46092594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
tx.17916	chr7	-	1513	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	19	3196	0	0	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	191	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCATCGGGATGATGGT	NA	False	NA	NA	False	NA	NA	NA	46360085	46338727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
tx.17917	chr7	-	2417	8	ISM	ENSMUSG00000014418.17	ENSMUST00000142663.8	4735	24	23529	0	-162	0	3prime_fragment	FALSE	canonical	3	51	junction_7	5.54020555133295	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATATGAGATTTACTT	NA	False	NA	NA	False	NA	NA	NA	46421573	46409889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030
tx.17918	chr7	-	4647	23	FSM	ENSMUSG00000014418.17	ENSMUST00000014562.14	4953	23	306	0	-18	0	multi-exon	FALSE	canonical	3	17	junction_22	12.9471270625399	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATATGAGATTTACTT	NA	False	NA	NA	False	NA	NA	NA	46445145	46409889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
tx.17919	chr7	-	4973	23	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	12.4724489764871	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	NA	False	NA	NA	NA	46445500	46409894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
tx.1792	chr10	-	3440	14	FSM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	0	-1	0	1	multi-exon	FALSE	canonical	3	105	junction_13	111.384031022692	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGCAGTGACAGCAGC	9981	False	NA	NA	False	NA	NA	NA	80512127	80501159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
tx.17920	chr7	-	4494	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107654.8	4422	23	-77	5	-12	-1	multi-exon	FALSE	canonical	2	7	junction_22	14.2782270816457	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	NA	False	NA	NA	NA	46445500	46409894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
tx.17921	chr7	+	2806	16	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	187.878920821067	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4705	False	NA	NA	False	NA	NA	NA	46445525	46473224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_46445713_46446820_46446890_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
tx.17922	chr7	+	2723	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	13	0	2	0	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	475	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4719	False	NA	NA	False	NA	NA	NA	46445539	46473224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
tx.17923	chr7	+	1584	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	4	0	0	0	multi-exon	FALSE	canonical	3	6684	junction_1	674.726490316405	4113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	46495266	46505051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
tx.17924	chr7	+	1191	8	FSM	ENSMUSG00000030851.16	ENSMUST00000014545.11	1370	8	31	148	31	-106	multi-exon	FALSE	canonical	1	3	junction_1	3.73619909446343	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATCTCAAGGCTAGAAAG	NA	False	NA	NA	False	NA	NA	NA	46510657	46527418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_46510726_46511186_46511320_46515832_46515951_46519022_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
tx.17925	chr7	-	1515	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	10	424	10	213	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	792	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTTCTTGGACTTG	NA	False	NA	NA	False	NA	NA	NA	46569707	46539120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
tx.17926	chr7	-	1397	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	10	216	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	371.517940679738	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCTTGGACTTGAGA	NA	False	NA	NA	False	NA	NA	NA	46569707	46539117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_46539453_46540669_46540789_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
tx.17927	chr7	-	1399	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-3	214	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	371.218746865903	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCTTGGACTTGA	NA	False	NA	NA	False	NA	NA	NA	46569695	46539119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558712_46560492_46560559_46563125_46563211_46569568
tx.17928	chr7	-	1448	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	2	215	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	331.9070969227	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTTCTTGGACTTGAG	NA	False	NA	NA	False	NA	NA	NA	46569715	46539118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46560559_46563125_46563211_46569568
tx.17929	chr7	-	1350	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-10	212	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	409.120460280842	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	NA	False	NA	NA	NA	46569702	46539121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
tx.1793	chr10	-	3398	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	433	junction_2	28.6420471318886	849	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGCAGTGACAGCAGC	9981	False	NA	NA	False	NA	NA	NA	80512127	80501159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
tx.17930	chr7	-	5230	11	NIC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	-11	-6	intron_retention	FALSE	canonical	2	49	junction_9	11.4699607671517	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTGCTATGTGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	46608286	46573292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
tx.17931	chr7	-	4564	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	50	2	-5	-2	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATCTGCTGTCTGATTA	NA	False	NA	NA	False	NA	NA	NA	46608225	46572965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
tx.17932	chr7	-	5225	6	FSM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	-3	1	-3	-1	multi-exon	FALSE	canonical	3	20	junction_2	5.03587132480567	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTGGTTTTCATTT	9269	False	NA	NA	False	NA	NA	NA	46658162	46640144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46657822
tx.17933	chr7	+	1814	3	FSM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	17	0	17	0	multi-exon	FALSE	canonical	3	21	junction_1	1	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCCTGACTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	46700365	46704525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_46700550_46702597_46702863_46703160
tx.17934	chr7	+	2380	17	FSM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	29	1	0	-1	multi-exon	TRUE	canonical	3	240	junction_5	25.4348893009189	304	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAGTTTCTAATGCTT	NA	False	NA	NA	False	NA	NA	NA	48438779	48477187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
tx.17935	chr7	-	3698	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	-8	1	-8	-1	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACATTTTCATTTGGC	NA	False	NA	NA	False	NA	NA	NA	48530797	48516177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
tx.17936	chr7	-	3593	13	FSM	ENSMUSG00000046179.18	ENSMUST00000119223.2	3499	13	-94	0	-94	0	multi-exon	FALSE	canonical	3	85	junction_12	21.1073644336126	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	NA	False	NA	NA	NA	48531438	48516176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
tx.17937	chr7	+	1662	5	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	8	22	intron_retention	FALSE	canonical	3	230	junction_1	21.9928965804871	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTTGTTCTAGTTGC	9902	False	NA	NA	False	NA	NA	NA	49408884	49423745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
tx.17938	chr7	+	2482	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	14	11	14	-11	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	448	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGCATCACACTGAAT	NA	False	NA	NA	False	NA	NA	NA	49428107	49508002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
tx.17939	chr7	-	4713	2	Genic_Genomic	ENSMUSG00000092118.2	novel	1691	1	NA	NA	-4	3628	multi-exon	FALSE	canonical	0	0	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATTTTAGCAGATGGG	NA	False	NA	NA	False	NA	NA	NA	51512019	51506696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr7_-_51508550_51509159
tx.1794	chr10	-	3578	13	ISM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	1	0	1	0	intron_retention	FALSE	canonical	3	433	junction_2	27.8601417799695	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCAGTGACAGCAG	9982	False	NA	NA	False	NA	NA	NA	80512126	80501160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657
tx.17940	chr7	+	2571	10	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	19.956124713487	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCCCAGCAATATGA	617	False	NA	NA	False	NA	NA	NA	51511774	51644264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_51512193_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
tx.17941	chr7	+	2945	10	NIC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	-162	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.8980071581387	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATTTCCCAGCAATATG	443	False	NA	NA	False	NA	NA	NA	51511600	51644263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_51512394_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
tx.17942	chr7	+	2765	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-140	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	15.4008928312614	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACACATTATTTGTCTCT	465	False	NA	NA	False	NA	NA	NA	51511622	51644201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_51512394_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
tx.17943	chr7	+	2522	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-90	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	19.2142525225417	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTCTCTGTATCAGT	515	False	NA	NA	False	NA	NA	NA	51511672	51644209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_51512193_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
tx.17944	chr7	-	2910	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	145	-2	-25	2	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAGAGTTAGATGCACG	NA	False	NA	NA	False	NA	NA	NA	51655621	51646916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
tx.17945	chr7	+	184	2	Antisense	novelGene_ENSMUSG00000099647.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACCAAAACACAAACTT	NA	False	NA	NA	False	NA	NA	NA	54025607	54075276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_+_54025767_54075251
tx.17946	chr7	-	526	2	Genic_Genomic	ENSMUSG00000099647.2	novel	321	1	NA	NA	-46	275	multi-exon	FALSE	canonical	3	158	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGCTACTTCAAAGC	NA	False	NA	NA	False	NA	NA	NA	54062272	54061630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr7_-_54062012_54062127
tx.17947	chr7	+	2270	11	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	-36	17553	-25	602	5prime_fragment	FALSE	canonical	3	83	junction_7	5.8172158288996	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCTTGCTTATTTGGG	NA	False	NA	NA	False	NA	NA	NA	55443876	55459294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258
tx.17948	chr7	+	4150	14	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	-6	8284	5	-225	intron_retention	FALSE	canonical	3	83	junction_7	5.82384407099929	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACCTGGCAGAATGTGT	NA	False	NA	NA	False	NA	NA	NA	55443906	55468563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205
tx.17949	chr7	+	3668	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	5	232	5	-1	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACCTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	55443906	55481193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
tx.1795	chr10	-	3455	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	131.855892289124	33	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9981	False	NA	NA	False	NA	NA	NA	80512127	80501161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507909_80511657_80511775_80511956
tx.17950	chr7	+	4441	2	ISM	ENSMUSG00000033790.12	ENSMUST00000205311.2	931	7	-3516	8254	802	3641	5prime_fragment	FALSE	canonical	3	72	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGATCCCCAACTACAAGAA	NA	False	NA	NA	False	NA	NA	NA	55467874	55472429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_55471612_55471725
tx.17951	chr7	+	4378	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	158	1904	-21	200	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	800	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	NA	False	NA	NA	NA	55491976	55580446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
tx.17952	chr7	+	4369	31	FSM	ENSMUSG00000030447.16	ENSMUST00000085255.11	4195	31	27	-201	-17	201	multi-exon	FALSE	canonical	3	23	junction_15	147.013453654948	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCGTTTGTTCATTGGC	NA	False	NA	NA	False	NA	NA	NA	55491980	55580447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
tx.17953	chr7	-	3174	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	24	-1	-2	1	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	55612200	55581033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
tx.17954	chr7	-	2979	7	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	69.789564644962	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	55612201	55581033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55612143
tx.17955	chr7	-	3053	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	-13	-1	-2	1	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	55612200	55581033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
tx.17956	chr7	-	2876	6	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	84.7924524943111	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	55612219	55581033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55612143
tx.17957	chr7	-	1901	5	FSM	ENSMUSG00000047037.6	ENSMUST00000052204.6	3183	5	368	914	368	-914	multi-exon	FALSE	canonical	3	26	junction_2	3.34477204006491	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTTGTTACATTAGAGA	NA	False	NA	NA	False	NA	NA	NA	55669334	55628228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_55629652_55635151_55635313_55646181_55646273_55647263_55647312_55669156
tx.17958	chr7	+	5570	9	FSM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	7	2	-4	2	multi-exon	FALSE	canonical	3	23	junction_5	6.11223158919883	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGAAGACTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	57240916	57478548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
tx.17959	chr7	+	5388	21	FSM	ENSMUSG00000025324.9	ENSMUST00000168747.3	5419	21	-33	64	-33	-64	multi-exon	FALSE	canonical	1	3	junction_4	4.04474968323134	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGGTGTTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	58307960	58479104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474047_58474249_58476820_58476902_58476993_58477099_58477522_58477711_58477866
tx.1796	chr10	-	2624	3	ISM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	10286	1	2167	-1	3prime_fragment	FALSE	canonical	3	64	junction_1	8	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGGGCTGCTCCTTGTT	NA	False	NA	NA	False	NA	NA	NA	80527403	80521087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_80523008_80525685_80525889_80526902
tx.17960	chr7	+	4910	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	7	-6	7	4	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTTCAGTTTATT	NA	False	NA	NA	False	NA	NA	NA	58878505	58956481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
tx.17961	chr7	+	5095	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	-44	4805	7	2	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTGTTCTTCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	58878505	58956479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
tx.17962	chr7	+	5031	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTCTTCAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	58878503	58956480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
tx.17963	chr7	+	8102	8	ISM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	47018	710	-1115	-710	3prime_fragment	FALSE	canonical	3	221	junction_3	26.2281979431859	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCCATAAATATGGAGTG	NA	False	NA	NA	False	NA	NA	NA	58925567	58960574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
tx.17964	chr7	-	4211	3	FSM	ENSMUSG00000100826.7	ENSMUST00000188976.2	2193	3	-2018	0	-690	0	multi-exon	FALSE	canonical	3	77	junction_2	5.5	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATAGTTTGTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	59626197	59619324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_59620292_59621627_59621693_59623018
tx.17965	chr7	-	6341	5	ISM	ENSMUSG00000077191.3_ENSMUSG00000100826.7	ENSMUST00000189581.7	6861	12	-3113	32206	2	0	5prime_fragment	FALSE	canonical	3	50	junction_4	15.4008928312614	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATAGTTTGTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	59628620	59619324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_59620292_59621627_59621693_59623018_59623399_59623594_59623648_59623744
tx.17966	chr7	-	1330	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	-17	619	-17	-612	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	1113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	59654876	59632861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
tx.17967	chr7	+	1342	2	Genic_Genomic	ENSMUSG00000047370.6	novel	492	1	NA	NA	-48	7869	multi-exon	FALSE	canonical	0	0	junction_1	0	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTCATCAACATAAAGA	NA	False	NA	NA	False	NA	NA	NA	59805308	59813717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr7_+_59806578_59813644
tx.17968	chr7	-	5235	10	FSM	ENSMUSG00000030525.9	ENSMUST00000032738.7	2078	10	-28	-3129	28	3129	multi-exon	FALSE	canonical	3	9	junction_2	5.31478255248951	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTATTACTGTTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	62862289	62745310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855_62861996_62862169
tx.17969	chr7	-	6471	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	-78	3	-78	-3	multi-exon	FALSE	canonical	3	56	junction_1	0	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTGTTTGCCTCGGTT	NA	False	NA	NA	False	NA	NA	NA	63588741	63536101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_63541546_63587714
tx.1797	chr10	-	2681	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	1	0	1	0	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGGCTGCTCCTTGTTG	9118	False	NA	NA	False	NA	NA	NA	80537688	80521086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
tx.17970	chr7	+	1921	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	72	-1	-6	1	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	672	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGAGTTTTCAGACT	NA	False	NA	NA	False	NA	NA	NA	63835200	63861176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
tx.17971	chr7	+	2872	14	FSM	ENSMUSG00000030523.19	ENSMUST00000177102.8	2928	14	-16	72	-16	0	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATCTTAGATGAATTG	NA	False	NA	NA	False	NA	NA	NA	63835190	63874512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
tx.17972	chr7	+	2708	11	FSM	ENSMUSG00000030523.19	ENSMUST00000205731.2	2575	11	-133	0	-37	0	multi-exon	FALSE	canonical	3	82	junction_10	225.867682504603	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGCTCTTTGACTCAT	NA	False	NA	NA	False	NA	NA	NA	63835169	63868483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
tx.17973	chr7	+	5212	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	-21	14	-4	-14	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGCCTTGGCATTGG	706	False	NA	NA	False	NA	NA	NA	63937396	63990540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
tx.17974	chr7	-	3996	14	Fusion	ENSMUSG00000092187.2_ENSMUSG00000033458.18	novel	3460	14	NA	NA	749	1870	multi-exon	TRUE	non_canonical	0	0	junction_1	6.88536738480008	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGCTCAGTGGGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	64022372	63994635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_-_63996282_63996339_63996644_63998595_63998725_63999064_63999260_63999782_63999887_64003323_64003475_64004118_64004284_64011687_64011808_64012879_64012989_64014277_64014410_64016302_64016537_64018767_64018970_64021266_64021408_64022008
tx.17975	chr7	-	2167	11	FSM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	32	49	0	-49	multi-exon	FALSE	canonical	3	635	junction_4	61.7421250039226	926	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTGTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	64041984	64026323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
tx.17976	chr7	+	564	3	FSM	ENSMUSG00000033429.11	ENSMUST00000206194.2	532	3	-34	2	1	-2	multi-exon	FALSE	canonical	3	108	junction_2	103	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTATTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	64042488	64061867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_64042592_64049916_64050093_64061582
tx.17977	chr7	+	723	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	99	6	4	-2	multi-exon	FALSE	canonical	3	203	junction_2	55.5	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTATTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	64042491	64061867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_64042592_64049916_64050255_64061582
tx.17978	chr7	-	6856	27	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-26	0	intron_retention	FALSE	canonical	3	35	junction_1	34.2514198729572	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	65021013	64945912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_64947416_64949456_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
tx.17979	chr7	-	6896	27	FSM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	-251	-543	-27	0	multi-exon	FALSE	canonical	3	136	junction_1	23.0143060730422	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	65021014	64945912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
tx.1798	chr10	-	4797	31	FSM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	8	0	8	0	multi-exon	FALSE	canonical	1	82	junction_14	55.4957555934586	347	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9216	False	NA	NA	False	NA	NA	NA	80578090	80542789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
tx.17980	chr7	-	6835	27	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-26	0	intron_retention	FALSE	canonical	3	43	junction_1	33.0858664117024	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	65021013	64945912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
tx.17981	chr7	-	6893	28	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-103	0	intron_retention	FALSE	canonical	1	4	junction_26	48.3012097023518	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	65177632	64945912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65162946_65163080_65177311
tx.17982	chr7	+	3198	19	FSM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	-6	0	-6	0	multi-exon	FALSE	canonical	3	56	junction_9	7.60035736651675	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCGGTATGTTCCATTGT	NA	False	NA	NA	False	NA	NA	NA	65294639	65341839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
tx.17983	chr7	+	861	5	FSM	ENSMUSG00000078681.11	ENSMUST00000032726.14	908	5	52	-5	-7	-4	multi-exon	FALSE	canonical	3	473	junction_3	21.6333076527839	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCCAGAACTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	65343207	65351655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65351340
tx.17984	chr7	-	2236	2	FSM	ENSMUSG00000093405.2	ENSMUST00000176744.2	380	2	-114	-1742	-114	1742	multi-exon	FALSE	canonical	3	34	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTATATATCATATATA	NA	False	NA	NA	False	NA	NA	NA	65511854	65509011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_65510986_65511592
tx.17985	chr7	-	2011	3	NNC	ENSMUSG00000093405.2	novel	380	2	NA	NA	-278	1755	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	15	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATTGAATTATGTTC	NA	False	NA	NA	False	NA	NA	NA	65512018	65508998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_65510336_65510737_65510986_65511592
tx.17986	chr7	+	4379	22	FSM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	-17	43	-17	3	multi-exon	FALSE	canonical	3	127	junction_4	20.9878487682365	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTTGTATTTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	65511759	65700091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
tx.17987	chr7	+	4227	21	FSM	ENSMUSG00000030513.15	ENSMUST00000098391.11	4207	21	-11	-9	-11	3	multi-exon	FALSE	canonical	3	46	junction_14	34.1808060174128	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTTGTATTTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	65511872	65700091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
tx.17988	chr7	+	2021	7	NIC	ENSMUSG00000030512.14	novel	955	8	NA	NA	1	-3	intron_retention	FALSE	canonical	3	2772	junction_5	192.939253537365	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGTGCTGTGTATCT	NA	False	NA	NA	False	NA	NA	NA	65710292	65724332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65720414_65720979_65721074_65724069
tx.17989	chr7	+	1042	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	203	3	-3	-3	multi-exon	FALSE	canonical	3	2395	junction_6	274.913622798144	475	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGTGCTGTGTATCT	NA	False	NA	NA	False	NA	NA	NA	65710288	65724332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
tx.1799	chr10	+	6806	28	FSM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	2	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	16.1546877685662	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1657	False	NA	NA	False	NA	NA	NA	80591041	80631295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
tx.17990	chr7	+	1171	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	20	0	-8	0	multi-exon	FALSE	canonical	3	410	junction_5	18.3804243694209	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	65729416	65739153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
tx.17991	chr7	+	4235	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	-68	9	-68	-9	multi-exon	FALSE	canonical	3	165	junction_1	21	355	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGACCCATTTTGTC	NA	False	NA	NA	False	NA	NA	NA	65759194	65823537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_65759976_65774989_65775486_65820579
tx.17992	chr7	-	3405	13	FSM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	36	2	36	-2	multi-exon	FALSE	canonical	3	10	junction_1	4.11214326382511	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATTGTTTTTCATTGG	NA	False	NA	NA	False	NA	NA	NA	66077229	66040639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_66042510_66048435_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
tx.17993	chr7	-	5133	8	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	0	90	intron_retention	FALSE	canonical	3	10	junction_5	27.0539898600362	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTAGGTCACTGGTGA	NA	False	NA	NA	False	NA	NA	NA	66339295	66294222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66337631_66337707_66338570_66338669_66338847
tx.17994	chr7	-	5024	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	29	junction_2	17.1407571465077	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	66339351	66294312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
tx.17995	chr7	-	4926	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	2	0	2	0	multi-exon	FALSE	canonical	3	23	junction_2	20.3273215156351	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	66339342	66294312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
tx.17996	chr7	+	2650	8	FSM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	0	-3	0	0	multi-exon	FALSE	canonical	3	24	junction_5	18.4113984215413	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	66339705	66364495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
tx.17997	chr7	+	5091	8	FSM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	-5	2	4	0	multi-exon	FALSE	canonical	3	20	junction_5	19.3454102556442	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCAAGTGTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	66339700	66367002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
tx.17998	chr7	+	2914	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	-9	-7	3	0	multi-exon	FALSE	canonical	3	45	junction_1	19.5	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	66872346	66878211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_66872378_66873356_66873640_66875611
tx.17999	chr7	+	3301	3	FSM	ENSMUSG00000043831.13	ENSMUST00000208998.2	2110	3	5	-1196	5	0	multi-exon	FALSE	canonical	3	29	junction_1	27.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	66872368	66878211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_66872787_66873356_66873640_66875611
tx.18	chr1	+	6389	3	FSM	ENSMUSG00000051285.18	ENSMUST00000182892.8	4207	3	-2058	-124	-2058	83	multi-exon	FALSE	canonical	3	143	junction_2	5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	7228250	7242966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_7231288_7233471_7233596_7239738
tx.180	chr1	+	1109	6	NIC	ENSMUSG00000026111.16	novel	1179	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	188.928134485047	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	37469262	37478068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_37469419_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
tx.1800	chr10	+	7445	29	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_27	19.5948764648688	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	1648	False	NA	NA	False	NA	NA	NA	80591032	80631294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976_80628608_80629340
tx.18000	chr7	-	5403	11	FSM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	30	-2957	-1	-87	multi-exon	FALSE	canonical	3	15	junction_6	11.6120626935958	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTTAAGACAATGCTT	NA	False	NA	NA	False	NA	NA	NA	67022576	66880997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
tx.18001	chr7	-	5412	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	25	-678	-6	-77	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATGCTTGAGGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	67022581	66880987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
tx.18002	chr7	-	5417	11	FSM	ENSMUSG00000030557.18	ENSMUST00000076325.12	2664	11	32	-2785	1	-91	multi-exon	FALSE	canonical	3	7	junction_9	15.401623291069	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAAATGGTTAAGACAAT	NA	False	NA	NA	False	NA	NA	NA	67022574	66881001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999596_66999670_67022460
tx.18003	chr7	-	5412	11	NIC	ENSMUSG00000030557.18	novel	4759	11	NA	NA	-1	-92	intron_retention	FALSE	canonical	3	7	junction_9	12.5713961038542	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATCAAATGGTTAAGACAA	NA	False	NA	NA	False	NA	NA	NA	67022576	66881002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596_66999670_67022460
tx.18004	chr7	-	2826	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	574	False	NA	NA	False	NA	NA	NA	67294977	67163157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
tx.18005	chr7	+	2209	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	8	-1	8	1	multi-exon	FALSE	canonical	3	46	junction_1	12.2429571591181	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTGTGTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	67297180	67376325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
tx.18006	chr7	+	4232	12	NIC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	-1952	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	27.3674113977112	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTTGTGTGTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	67295205	67376324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_67297594_67301670_67301720_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
tx.18007	chr7	+	5295	21	FSM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	-954	7068	-954	432	multi-exon	FALSE	canonical	2	11	junction_1	3.59826347006441	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAAGCAGCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	67601620	67876348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
tx.18008	chr7	+	5367	22	NNC	ENSMUSG00000005533.11	novel	11409	21	NA	NA	-935	430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	5.74870585850581	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGCAAGCAGCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	67601639	67876346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67858660_67858754_67861741_67861905_67864666_67864797_67868149_67868285_67875767
tx.18009	chr7	-	211	1	Intergenic	novelGene_357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGAACTCTCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	67905256	67905045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_67905000_67905300
tx.1801	chr10	+	4574	9	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	30655	0	697	0	3prime_fragment	FALSE	canonical	3	80	junction_3	13.9798962800158	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	6281	False	NA	NA	False	NA	NA	NA	80621694	80631295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
tx.18010	chr7	+	2728	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-39	-21	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	43.556203428936	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCACATGTTAATAGCT	NA	False	NA	NA	False	NA	NA	NA	67925703	68012814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_67925790_67950580_67950712_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
tx.18011	chr7	+	2823	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	-34	26	-34	-21	multi-exon	FALSE	canonical	3	103	junction_5	20.4328167417025	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCACATGTTAATAGCT	NA	False	NA	NA	False	NA	NA	NA	67925708	68012814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
tx.18012	chr7	+	2568	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-30	-8	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	52.588813766174	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTTAATTTTAGGACT	NA	False	NA	NA	False	NA	NA	NA	67925712	68012827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67999981_68000165_68003356_68003492_68007932_68008037_68010989
tx.18013	chr7	+	2644	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-33	-21	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	44.7788215247215	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCACATGTTAATAGCT	NA	False	NA	NA	False	NA	NA	NA	67925709	68012814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67999981_68000165_68003356_68003492_68007932_68008037_68010989
tx.18014	chr7	+	2750	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-35	-9	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	51.6048565978997	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGCTTAATTTTAGGAC	NA	False	NA	NA	False	NA	NA	NA	67925707	68012826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
tx.18015	chr7	-	3883	8	FSM	ENSMUSG00000042659.16	ENSMUST00000048068.15	3905	8	21	1	21	-1	multi-exon	FALSE	canonical	3	375	junction_1	213.33809518495	698	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGGTGGCTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	68398968	68386743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
tx.18016	chr7	-	1082	5	FSM	ENSMUSG00000042659.16	ENSMUST00000118110.3	1129	5	-34	81	19	-81	multi-exon	FALSE	canonical	3	754	junction_4	68.2289344779764	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGATTGCAAATGTGATCT	NA	False	NA	NA	False	NA	NA	NA	68398970	68391339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
tx.18017	chr7	-	4445	23	FSM	ENSMUSG00000032776.10	ENSMUST00000079323.8	5802	23	-111	1468	-111	1115	multi-exon	FALSE	canonical	1	1	junction_22	2.92220057462644	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATGTCTGTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	71956467	71729045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_71730606_71732834_71732933_71739918_71740029_71752891_71753002_71771445_71771488_71776885_71777009_71810887_71811008_71812945_71813021_71814357_71814460_71833552_71833656_71835510_71835614_71850093_71850188_71852036_71852224_71861342_71861474_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896855_71896919_71908846_71909380_71956218
tx.18018	chr7	+	3630	4	FSM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	-45	1	-34	-1	multi-exon	FALSE	canonical	3	9	junction_1	7.93025150224688	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCTGTTGGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	73025222	73069646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_73025637_73041128_73041245_73058979_73059498_73067064
tx.18019	chr7	+	3352	3	FSM	ENSMUSG00000070509.16	ENSMUST00000139780.3	3371	3	18	1	18	-1	multi-exon	FALSE	canonical	3	22	junction_1	3	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCTGTTGGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	73040992	73069646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_73041245_73058979_73059498_73067064
tx.1802	chr10	+	3656	5	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	33408	0	-449	0	3prime_fragment	FALSE	canonical	3	86	junction_4	14.0066948278314	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1730	False	NA	NA	False	NA	NA	NA	80624447	80631295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
tx.18020	chr7	-	3629	14	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	22216	61972	-15961	9097	internal_fragment	FALSE	canonical	3	31	junction_10	5.66417162846311	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTTAATGAGTTGAACA	NA	False	NA	NA	False	NA	NA	NA	73169278	73138357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224
tx.18021	chr7	-	4444	16	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	-3	61972	-3	9097	5prime_fragment	FALSE	canonical	3	19	junction_14	8.62142035217451	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTTAATGAGTTGAACA	NA	False	NA	NA	False	NA	NA	NA	73191497	73138357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
tx.18022	chr7	-	1608	2	FSM	ENSMUSG00000078671.12	ENSMUST00000200218.2	1387	2	-221	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTGTATGACTGTA	NA	False	NA	NA	False	NA	NA	NA	73191494	73189545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_73190653_73190993
tx.18023	chr7	-	2369	2	ISM	ENSMUSG00000101970.9	ENSMUST00000183916.8	432	5	4433	-338	4433	131	3prime_fragment	FALSE	canonical	3	269	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	73201235	73193652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_73194131_73199344
tx.18024	chr7	-	3162	4	ISM	ENSMUSG00000101970.9	ENSMUST00000187421.7	519	5	-561	-228	-139	0	intron_retention	FALSE	canonical	3	218	junction_3	22.9540604009158	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGGGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	73208282	73193783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602
tx.18025	chr7	-	1050	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	-145	4235	-145	0	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGGGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	73208288	73193783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
tx.18026	chr7	+	2700	3	FSM	ENSMUSG00000078670.4	ENSMUST00000107456.4	2683	3	-18	1	-18	-1	multi-exon	FALSE	canonical	3	29	junction_2	1.5	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGAGTCACGAGTGTGC	NA	False	NA	NA	False	NA	NA	NA	73390031	73426666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_73390577_73416234_73416367_73424643
tx.18027	chr7	-	5372	6	FSM	ENSMUSG00000025789.10	ENSMUST00000026896.10	5368	6	-7	3	-7	-3	multi-exon	FALSE	canonical	2	7	junction_2	2.31516738055805	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTGGGTGTCTATAGA	NA	False	NA	NA	False	NA	NA	NA	73663429	73588869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_73593213_73610439_73610734_73616488_73616747_73621665_73621795_73626405_73626469_73663144
tx.18028	chr7	-	4769	10	FSM	ENSMUSG00000025790.15	ENSMUST00000026897.14	4589	10	-182	2	-16	-2	multi-exon	FALSE	canonical	0	0	junction_7	1.82574185835055	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATGATTTCCATGAGT	NA	False	NA	NA	False	NA	NA	NA	74204544	73931607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_73934418_73946968_73947034_73952869_73953046_73968206_73968346_73970232_73970432_73977607_73977773_73996395_73996660_74009568_74009668_74153924_74154391_74204158
tx.18029	chr7	-	1400	3	FSM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	-20	-724	-20	0	multi-exon	FALSE	canonical	3	19	junction_1	6.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTAGTGGTCTTGCCC	NA	False	NA	NA	False	NA	NA	NA	75431867	75418785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_75419986_75430372_75430505_75431799
tx.1803	chr10	+	2776	2	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	35535	0	-713	0	3prime_fragment	FALSE	canonical	3	86	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	3857	False	NA	NA	False	NA	NA	NA	80626574	80631295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_80627396_80629340
tx.18030	chr7	-	172	2	ISM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	10	10861	10	-10861	5prime_fragment	FALSE	canonical	3	32	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGCTTTCCTTACG	NA	False	NA	NA	False	NA	NA	NA	75431837	75430370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_75430505_75431799
tx.18031	chr7	+	3374	3	FSM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	30	-1	-1	1	multi-exon	FALSE	canonical	3	36	junction_1	5	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGGGTTCTGATTCT	NA	False	NA	NA	False	NA	NA	NA	75498087	75523880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_75498222_75515084_75516890_75522445
tx.18032	chr7	-	4399	14	FSM	ENSMUSG00000059146.13	ENSMUST00000039438.9	3977	14	-422	0	-1	0	multi-exon	FALSE	canonical	3	25	junction_10	6.48804088737217	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	NA	NA	NA	78228152	77950437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
tx.18033	chr7	-	3821	15	NNC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	10.2342462310796	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	NA	NA	NA	78228152	77950437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78228124
tx.18034	chr7	-	4265	13	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-2	0	intron_retention	FALSE	canonical	2	6	junction_1	10.1680326951131	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	NA	NA	NA	78228153	77950437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_77952496_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
tx.18035	chr7	-	983	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	46	105	46	-105	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATTTGTCCTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	78432791	78425088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
tx.18036	chr7	+	856	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	200	0	6	0	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	78433066	78442737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
tx.18037	chr7	+	2647	4	FSM	ENSMUSG00000030611.11	ENSMUST00000136001.8	548	4	-33	-2066	-18	0	multi-exon	FALSE	canonical	3	364	junction_2	42.7083130081252	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	78433084	78442737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384
tx.18038	chr7	-	2239	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	31	-1	31	-1	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTCTCTTCCTTGAT	NA	False	NA	NA	False	NA	NA	NA	78496980	78477220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
tx.18039	chr7	-	1746	4	ISM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	3366	-1	-644	-1	3prime_fragment	FALSE	canonical	3	86	junction_2	6.23609564462324	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTCTCTTCCTTGAT	NA	False	NA	NA	False	NA	NA	NA	78493645	78477220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919
tx.1804	chr10	-	3054	3	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	49	1694	intron_retention	FALSE	canonical	3	953	junction_2	138.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTTCCTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	80634345	80630238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80632657_80633606_80633812_80633914
tx.18040	chr7	+	2118	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	11	2827	4	1	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	325	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	78545685	78558130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
tx.18041	chr7	+	1998	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	10	-1	-7	1	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	441	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	78545691	78558130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
tx.18042	chr7	+	2236	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	-2	-4	-2	1	multi-exon	FALSE	canonical	2	13	junction_1	306.901721511409	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	78545754	78558130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_78545950_78551977_78552579_78555590_78555792_78556891
tx.18043	chr7	+	2045	3	ISM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	6216	-3	-136	0	3prime_fragment	FALSE	canonical	3	660	junction_1	4	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGGTCCTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	78551972	78558129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_78552579_78555590_78555792_78556891
tx.18044	chr7	+	5054	2	ISM	ENSMUSG00000030609.19	ENSMUST00000123824.2	4428	3	6375	2827	-132	1	3prime_fragment	FALSE	canonical	3	668	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	78551976	78558130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_78555792_78556891
tx.18045	chr7	+	5798	13	NNC	ENSMUSG00000030607.8	novel	2596	7	NA	NA	-10355	-222	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	4.27849921766448	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACATTGTGTGTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	78739143	78764153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_78739351_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
tx.18046	chr7	-	2008	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_6	144.155948541848	1190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	NA	False	NA	NA	NA	78798801	78783515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
tx.18047	chr7	-	2118	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	8	-1	1	0	multi-exon	TRUE	canonical	3	296	junction_6	379.595691346581	470	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	NA	False	NA	NA	NA	78798800	78783515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
tx.18048	chr7	+	6822	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	28	27	-27	-27	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAGACAAAAAA	2750	False	NA	NA	False	NA	NA	NA	78922974	79015229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
tx.18049	chr7	+	6373	8	ISM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	50334	-1	50279	1	3prime_fragment	FALSE	canonical	3	33	junction_2	7.01892485516471	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTATGTGCTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	78973280	79015257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
tx.1805	chr10	-	727	4	ISM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	640	-3	-19	0	3prime_fragment	FALSE	canonical	3	943	junction_2	138.96362433705	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	80633754	80631932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606
tx.18050	chr7	-	2254	9	FSM	ENSMUSG00000039194.17	ENSMUST00000179243.3	2142	9	-111	-1	-111	1	multi-exon	FALSE	canonical	3	11	junction_8	4.45638586749397	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTTCATGATGAACTTA	NA	False	NA	NA	False	NA	NA	NA	79036907	79024616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
tx.18051	chr7	+	4646	38	FSM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	0	-1	0	1	multi-exon	TRUE	canonical	3	260	junction_14	37.7798783892034	694	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTAGTTTTGAAAATG	NA	False	NA	NA	False	NA	NA	NA	79042059	79100013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
tx.18052	chr7	-	6157	17	ISM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	6522	0	-44	0	3prime_fragment	FALSE	canonical	3	236	junction_15	46.4781114477557	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTTTGATCATGGTG	NA	False	NA	NA	False	NA	NA	NA	79109588	79095978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436
tx.18053	chr7	-	4548	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	138	3151	-26	0	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	411	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	NA	False	NA	NA	NA	79115972	79099129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
tx.18054	chr7	-	4285	22	ISM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	1099	3151	807	0	3prime_fragment	FALSE	canonical	3	224	junction_20	46.7652020949779	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	NA	False	NA	NA	NA	79115011	79099129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351
tx.18055	chr7	-	1997	11	FSM	ENSMUSG00000030549.7	ENSMUST00000032766.5	2090	11	93	0	93	0	multi-exon	FALSE	canonical	2	10	junction_10	3.38969025133566	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGGAGTGGATGTTCT	NA	False	NA	NA	False	NA	NA	NA	79267312	79243110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79243549_79244529_79244737_79248288_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
tx.18056	chr7	+	7172	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	27	0	1	0	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	277	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1951	False	NA	NA	False	NA	NA	NA	79309970	79347896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
tx.18057	chr7	+	2109	6	ISM	ENSMUSG00000046591.11	ENSMUST00000206591.2	3655	20	-21	18211	4	9	5prime_fragment	FALSE	canonical	3	244	junction_2	18.3847763108502	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGGCAAATTTCCATAT	1954	False	NA	NA	False	NA	NA	NA	79309973	79325470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019
tx.18058	chr7	+	3264	3	ISM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	33979	5	23254	-5	3prime_fragment	FALSE	canonical	3	279	junction_1	11.5	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTATTACTTTCC	NA	False	NA	NA	False	NA	NA	NA	79343922	79347891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_79345571_79345682_79345809_79346401
tx.18059	chr7	-	2679	12	ISM	ENSMUSG00000050382.15	ENSMUST00000178048.8	4524	18	6548	-1	6548	0	3prime_fragment	FALSE	canonical	3	38	junction_9	8.01238710419298	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCTTACATCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	79357386	79347845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267
tx.1806	chr10	-	903	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	357	0	25	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	80634103	80631932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
tx.18060	chr7	-	4587	19	FSM	ENSMUSG00000050382.15	ENSMUST00000183846.8	4577	19	-10	0	-10	0	multi-exon	FALSE	canonical	3	29	junction_12	9.36634374031449	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCTTACATCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	79365478	79347845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
tx.18061	chr7	-	4582	19	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_12	10.3147981913557	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGCTTACATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	79365477	79347846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357423_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
tx.18062	chr7	-	2242	3	FSM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	-1	0	-1	0	multi-exon	TRUE	canonical	3	20	junction_1	0	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTCTGTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	79392829	79385704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79387659_79389912_79390029_79392657
tx.18063	chr7	-	3788	21	FSM	ENSMUSG00000039062.16	ENSMUST00000107392.8	3797	21	9	0	-8	0	multi-exon	FALSE	canonical	1	4	junction_7	3.71853465763061	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCAGACTTGTCACTCA	6809	False	NA	NA	False	NA	NA	NA	79497949	79471550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385_79492409_79497892
tx.18064	chr7	-	3410	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	7	2396	7	-2396	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGGGGTTTTGGGTCTA	NA	False	NA	NA	False	NA	NA	NA	79570390	79527468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
tx.18065	chr7	-	1706	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	65	506	65	-506	multi-exon	FALSE	canonical	3	36	junction_1	5.76194411635517	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTGCTCCATGCTTGCT	9958	False	NA	NA	False	NA	NA	NA	79585042	79575614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
tx.18066	chr7	-	216	2	Antisense	novelGene_ENSMUSG00002076150.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	16	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGAATTCCCCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	79654221	79598466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_-_79598634_79654172
tx.18067	chr7	+	4452	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	-6	1425	-6	-1	multi-exon	TRUE	canonical	3	72	junction_4	112.192635676322	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGACTGTACGTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	79674555	79742496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
tx.18068	chr7	+	2278	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-23	4979	-3	5	5prime_fragment	FALSE	canonical	3	198	junction_1	67.6214955961983	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTGAGTGCTGTGTAAC	NA	False	NA	NA	False	NA	NA	NA	79674558	79736599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
tx.18069	chr7	+	2565	4	FSM	ENSMUSG00000048897.16	ENSMUST00000206039.2	2194	4	-365	-6	-15	6	multi-exon	FALSE	canonical	3	96	junction_1	115.519118186847	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGAGTGCTGTGTAACT	NA	False	NA	NA	False	NA	NA	NA	79675769	79736600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181
tx.1807	chr10	-	1273	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	-9	-3	-9	0	multi-exon	FALSE	canonical	3	943	junction_2	144.890260197157	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	80634403	80631932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633812_80633914
tx.18070	chr7	+	4581	5	FSM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	139	1	139	-1	multi-exon	FALSE	canonical	3	72	junction_4	128.705817661829	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGACTGTACGTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	79675923	79742496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79740082
tx.18071	chr7	-	183	2	Intergenic	novelGene_358	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	137	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAACCTGGGAG	9041	False	NA	NA	False	NA	NA	NA	79781739	79700268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_79700404_79781691
tx.18072	chr7	+	4189	4	ISM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	55097	0	53320	0	3prime_fragment	FALSE	canonical	3	72	junction_3	126.809568513842	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	79730881	79742497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_79732289_79735698_79735891_79736181_79736357_79740082
tx.18073	chr7	-	1694	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	51	0	-9	0	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	1647	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	79765089	79744593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
tx.18074	chr7	+	3804	15	FSM	ENSMUSG00000030539.14	ENSMUST00000032754.9	3949	15	17	128	17	-12	multi-exon	FALSE	canonical	3	35	junction_1	17.3394972033593	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGGCCCACATTCCT	NA	False	NA	NA	False	NA	NA	NA	79836605	79876147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
tx.18075	chr7	+	3647	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	100	13	5	-13	multi-exon	FALSE	canonical	3	56	junction_5	14.4283580075107	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTGGCCCACATTCC	5717	False	NA	NA	False	NA	NA	NA	79848288	79876146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
tx.18076	chr7	-	2612	6	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	4	3	intron_retention	FALSE	canonical	3	721	junction_2	27.9814224084481	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTATGATGGTAGC	2244	False	NA	NA	False	NA	NA	NA	79882368	79876903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79880173_79882091_79882127_79882257
tx.18077	chr7	-	831	6	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	305.980130073833	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2220	False	NA	NA	False	NA	NA	NA	79882392	79876906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882257
tx.18078	chr7	-	870	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	167	10	-22	2	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTTGTATGATGGTAG	2218	False	NA	NA	False	NA	NA	NA	79882394	79876904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
tx.18079	chr7	-	2846	5	ISM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	239	12	7	0	intron_retention	FALSE	canonical	3	721	junction_2	52.8978969336211	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2290	False	NA	NA	False	NA	NA	NA	79882322	79876906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063
tx.1808	chr10	-	883	6	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	211	junction_2	375.955529285047	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	80634119	80631932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633743_80633812_80633914
tx.18080	chr7	-	708	5	FSM	ENSMUSG00000030538.16	ENSMUST00000071457.12	702	5	-4	-2	-4	2	multi-exon	FALSE	canonical	3	77	junction_4	297.709904941035	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTTGTATGATGGTAG	2236	False	NA	NA	False	NA	NA	NA	79882376	79876904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79882257
tx.18081	chr7	+	1936	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	7	2246	7	-2246	multi-exon	FALSE	canonical	3	81	junction_1	0	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTTTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	79882619	79889563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79882954_79887961
tx.18082	chr7	+	2647	3	ISM	ENSMUSG00000045467.14	ENSMUST00000205270.2	2723	14	9353	-148	9353	-3	intron_retention	FALSE	canonical	2	15	junction_2	1.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGCGTGCTGTACCTCCT	NA	False	NA	NA	False	NA	NA	NA	79906488	79910566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_79906779_79907924_79908106_79908390
tx.18083	chr7	+	1712	2	FSM	ENSMUSG00000047084.9	ENSMUST00000138005.2	1709	2	-2	-1	-2	1	multi-exon	FALSE	canonical	3	448	junction_1	0	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGCTTGGTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	79910965	79915123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79911680_79914125
tx.18084	chr7	+	2561	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	11	2	11	-2	multi-exon	FALSE	canonical	3	97	junction_6	14.9188576657057	167	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTTTGTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	79919407	79941325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
tx.18085	chr7	+	2929	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	-10	-7	4	1	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	628	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTGTCTTCAATG	NA	False	NA	NA	False	NA	NA	NA	79944216	79966006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
tx.18086	chr7	+	3048	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-36	-4	4	1	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	572	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTGTCTTCAATG	NA	False	NA	NA	False	NA	NA	NA	79944216	79966006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
tx.18087	chr7	-	3249	20	FSM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	14	-3	1	0	multi-exon	TRUE	canonical	3	61	junction_19	11.9833679753749	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	NA	NA	NA	79989953	79975039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
tx.18088	chr7	-	3209	20	NIC	ENSMUSG00000030533.17	novel	3932	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	16.1947975641576	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	NA	NA	NA	79989958	79975039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
tx.18089	chr7	+	884	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	14	612	2	0	multi-exon	FALSE	canonical	3	96	junction_1	13.490737563232	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTTCTTCCTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	79992865	79995850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
tx.1809	chr10	+	1743	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	469	1	-65	-1	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	1108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGCTGTGTGTT	4821	False	NA	NA	False	NA	NA	NA	80634500	80640757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
tx.18090	chr7	-	5185	24	FSM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	52	1317	52	853	multi-exon	FALSE	canonical	0	0	junction_22	14.6847142211905	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAAGGCATTCTGTGAGT	4053	False	NA	NA	False	NA	NA	NA	80021071	80000161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
tx.18091	chr7	-	4333	16	FSM	ENSMUSG00000030530.16	ENSMUST00000122232.8	4286	16	-47	0	-47	0	multi-exon	FALSE	canonical	3	55	junction_15	14.0469055508876	179	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTCTCCAGTGTCTAT	3632	False	NA	NA	False	NA	NA	NA	80052557	80038941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
tx.18092	chr7	-	4499	22	FSM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	1	98	1	1	multi-exon	FALSE	canonical	3	335	junction_6	41.4509518092853	792	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGGCCATTGTTTC	NA	False	NA	NA	False	NA	NA	NA	80184866	80104838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
tx.18093	chr7	-	5166	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	-56	5	-56	-5	multi-exon	TRUE	canonical	0	0	junction_3	5.85757838102026	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTCTCGGTGTTTCTCT	1541	False	NA	NA	False	NA	NA	NA	80338681	80236379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
tx.18094	chr7	-	3859	12	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	73066	3	-102	-3	3prime_fragment	FALSE	canonical	3	584	junction_10	61.1956623537085	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTTATTTTTCTTG	9787	False	NA	NA	False	NA	NA	NA	80380098	80361333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989
tx.18095	chr7	-	7330	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	112	2	-23	-2	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	947	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATTTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	80453052	80361332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
tx.18096	chr7	+	2269	3	FSM	ENSMUSG00000038797.14	ENSMUST00000147125.2	1582	3	-32	-655	1	6	multi-exon	FALSE	canonical	2	3	junction_1	2.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTTTGTCGTCATTTC	2889	False	NA	NA	False	NA	NA	NA	80510668	80526291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_80510826_80512915_80513420_80524683
tx.18097	chr7	-	3147	7	FSM	ENSMUSG00000025722.17	ENSMUST00000152518.8	3142	7	-4	-1	-2	0	multi-exon	FALSE	canonical	3	95	junction_6	17.3365381652611	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	NA	False	NA	NA	NA	80550984	80540470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
tx.18098	chr7	-	2084	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	28	2	3	-1	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTTGTGTGTATGA	NA	False	NA	NA	False	NA	NA	NA	80550989	80540472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
tx.18099	chr7	-	2004	7	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	46.1173021278951	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTGTGTGTATGAG	NA	False	NA	NA	False	NA	NA	NA	80550997	80540471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391_80550460_80550932
tx.181	chr1	+	1265	6	FSM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	12	137	-4	0	multi-exon	FALSE	canonical	3	180	junction_1	129.498416978741	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	37469262	37478068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
tx.1810	chr10	+	1114	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	7082	junction_2	297.278021761149	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	80662519	80665119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544
tx.18100	chr7	-	2011	7	FSM	ENSMUSG00000025722.17	ENSMUST00000139990.8	2549	7	-4	542	-2	-5	multi-exon	FALSE	canonical	3	120	junction_4	7.94599829404014	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTAAGAAGCAATTAGCA	NA	False	NA	NA	False	NA	NA	NA	80550984	80541013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
tx.18101	chr7	-	1123	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	218	4	-17	-4	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	374	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCCTTTCCCTGAATT	1603	False	NA	NA	False	NA	NA	NA	80597310	80565128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
tx.18102	chr7	+	4880	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-29	2446	-29	1265	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGGCTCTTGTATTCCT	NA	False	NA	NA	False	NA	NA	NA	80643399	80692466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
tx.18103	chr7	+	4401	3	ISM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	4	17677	4	2894	5prime_fragment	FALSE	canonical	3	63	junction_1	21	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTAATTGTACCTGGCT	NA	False	NA	NA	False	NA	NA	NA	80643432	80677235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_80643511_80659181_80659288_80673018
tx.18104	chr7	+	4356	8	ISM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	29896	2447	157	1264	3prime_fragment	FALSE	canonical	3	89	junction_2	12.2690917449051	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTAGGCTCTTGTATTCC	NA	False	NA	NA	False	NA	NA	NA	80673324	80692465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
tx.18105	chr7	+	4423	9	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	34753	0	-2478	0	3prime_fragment	FALSE	canonical	3	11	junction_1	5.1234753829798	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGGTGTGATGATTAT	NA	False	NA	NA	False	NA	NA	NA	80742100	80755360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_80743933_80744654_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
tx.18106	chr7	+	1983	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27006	0	27006	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	118	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	NA	False	NA	NA	NA	80791603	80820164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
tx.18107	chr7	+	4095	22	FSM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	-292	-1	-292	1	multi-exon	FALSE	canonical	3	151	junction_8	20.0953509362663	348	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTGCCATTTCTTT	815	False	NA	NA	False	NA	NA	NA	80863051	80984282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
tx.18108	chr7	-	478	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	16	0	-4	0	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	1373	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	80994986	80992480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
tx.18109	chr7	-	3153	12	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	10.3116719552358	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTTTTGTCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81104563	80996773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
tx.1811	chr10	+	1038	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	6566	junction_4	420.790624895565	1398	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	80662520	80665118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
tx.18110	chr7	-	3152	12	FSM	ENSMUSG00000025586.18	ENSMUST00000098331.10	3111	12	-41	0	-41	0	multi-exon	FALSE	canonical	3	28	junction_5	13.4250290487089	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTTTTGTCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81104547	80996773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
tx.18111	chr7	-	3668	26	NIC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_25	13.1209755734854	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	81139567	81110148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81139285
tx.18112	chr7	-	3789	26	FSM	ENSMUSG00000062444.16	ENSMUST00000082090.15	3806	26	15	2	15	-2	multi-exon	FALSE	canonical	3	16	junction_25	15.5434873821804	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	7655	False	NA	NA	False	NA	NA	NA	81143658	81110148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
tx.18113	chr7	+	748	4	NNC	ENSMUSG00000097277.8	novel	725	4	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	40.7458245986288	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGTATTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	81173307	81181250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_81173429_81178534_81178689_81179094_81179276_81180958
tx.18114	chr7	+	787	4	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	41.2148840428633	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGTATTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	81173311	81181250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_81173472_81178534_81178689_81179094_81179276_81180958
tx.18115	chr7	+	5821	3	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	23	5	intron_retention	FALSE	canonical	3	93	junction_2	5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGGTATTATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	81173341	81181251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_81178689_81179094_81179276_81180958
tx.18116	chr7	+	2756	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	-25	338	1	21	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGTATTGAACACAGA	6959	False	NA	NA	False	NA	NA	NA	81221014	81246246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
tx.18117	chr7	+	3077	10	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	1	0	intron_retention	FALSE	canonical	2	4	junction_2	20.9961783706664	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCGTTTCCAGAGGCC	6959	False	NA	NA	False	NA	NA	NA	81221014	81246584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_81221658_81224293_81224451_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
tx.18118	chr7	-	2141	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	-12	-393	-12	393	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGAACTTAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	81356704	81259084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
tx.18119	chr7	-	2189	9	FSM	ENSMUSG00000025813.15	ENSMUST00000207983.2	1634	9	-164	-391	-29	391	multi-exon	FALSE	canonical	3	22	junction_5	5.73230974389905	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGCAGAACTTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	81356721	81259086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268464_81273999_81274093_81286108_81286241_81299301_81299459_81356506
tx.1812	chr10	-	3451	2	FSM	ENSMUSG00000051067.9	ENSMUST00000053986.9	3439	2	-12	0	-12	0	multi-exon	FALSE	canonical	3	10	junction_1	0	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACGTTTAGATATTAT	NA	False	NA	NA	False	NA	NA	NA	80679885	80668634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80671976_80679775
tx.18120	chr7	+	1421	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	30	1	30	-1	multi-exon	FALSE	canonical	3	441	junction_1	195	254	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTAGTTTTGACAGCC	NA	False	NA	NA	False	NA	NA	NA	81412702	81419238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_81412805_81417274_81417472_81418116
tx.18121	chr7	-	1315	5	NNC	ENSMUSG00000025102.15	novel	504	4	NA	NA	0	2349	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_4	96.0325465662553	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGGCGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	81439213	81429580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81438999
tx.18122	chr7	-	1356	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	0	2493	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	126.089254102005	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	81439213	81429436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439102
tx.18123	chr7	-	1089	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	13	-215	0	215	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGCAGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	81439213	81431714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
tx.18124	chr7	-	782	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	16	-3	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	106.699051073569	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCTAGCAGTTTCGAG	NA	False	NA	NA	False	NA	NA	NA	81439197	81431932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439175
tx.18125	chr7	-	3141	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	316.438555449553	42	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGTCACCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	81479213	81441822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
tx.18126	chr7	-	3035	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-34	0	-34	0	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	910	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	81479213	81441821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
tx.18127	chr7	+	2524	10	FSM	ENSMUSG00000038623.10	ENSMUST00000041890.8	2226	10	67	-365	48	2	multi-exon	TRUE	canonical	3	11	junction_7	3.33703498170693	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAACCCTGACTTAAC	NA	False	NA	NA	False	NA	NA	NA	81508815	81534184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_81509289_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
tx.18128	chr7	-	5988	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	-112	11	-112	-11	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAACAACAATGCTCTTGT	NA	False	NA	NA	False	NA	NA	NA	81584333	81531009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
tx.18129	chr7	-	1432	2	Intergenic	novelGene_359	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	11	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTTAATTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	81814527	81761504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_81762785_81814375
tx.1813	chr10	-	466	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	2	0	2	0	multi-exon	FALSE	canonical	3	2872	junction_3	751.769616009822	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	False	NA	NA	False	NA	NA	NA	80691041	80688658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
tx.18130	chr7	+	1618	9	FSM	ENSMUSG00000030638.14	ENSMUST00000032874.14	1647	9	24	5	-22	-5	multi-exon	FALSE	canonical	3	252	junction_3	40.04040927613	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGACTGGTTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	81824567	81956622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
tx.18131	chr7	+	1096	5	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.1139542868376	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGGCCTGTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	82297809	82308234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82307474
tx.18132	chr7	+	3600	20	FSM	ENSMUSG00000038563.15	ENSMUST00000179489.8	3608	20	-5	13	-5	-13	multi-exon	FALSE	canonical	3	42	junction_1	25.8006420500325	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAACTTCCAAACCGT	NA	False	NA	NA	False	NA	NA	NA	82297816	82427047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
tx.18133	chr7	+	3614	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	-16	12	-4	-12	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAACTTCCAAACCGTT	NA	False	NA	NA	False	NA	NA	NA	82297832	82427048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
tx.18134	chr7	+	3567	19	ISM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	881	9	389	-9	3prime_fragment	FALSE	canonical	3	73	junction_8	20.7522124359706	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTCCAAACCGTTTGT	NA	False	NA	NA	False	NA	NA	NA	82298729	82427051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
tx.18135	chr7	+	3432	2	FSM	ENSMUSG00000057706.8	ENSMUST00000082237.7	3355	2	-21	-56	-21	56	multi-exon	FALSE	canonical	3	9	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTGTATGGTGACTT	NA	False	NA	NA	False	NA	NA	NA	82516519	82520779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_82517136_82517963
tx.18136	chr7	+	6975	21	NNC	ENSMUSG00000038540.15	novel	627	3	NA	NA	-17027	1231	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	3.01454805899657	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCTTTGCTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	83217107	83276053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_83217217_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311
tx.18137	chr7	+	2447	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	33	3	-8	-3	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATCTTGAGTTCCTCAT	NA	False	NA	NA	False	NA	NA	NA	83281199	83291533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
tx.18138	chr7	+	1885	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	255	2352	-75	1100	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	1465	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATAGGTATATTCTGTC	NA	False	NA	NA	False	NA	NA	NA	83541462	83548388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_83541684_83544737_83544971_83546957
tx.18139	chr7	-	2438	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	-202	2	-202	-2	multi-exon	FALSE	canonical	3	1379	junction_1	80.5	2454	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCGTGGGCTTATGTGCT	NA	False	NA	NA	False	NA	NA	NA	83801303	83758565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_83760010_83763458_83763639_83800489
tx.1814	chr10	-	1593	2	FSM	ENSMUSG00000035215.10	ENSMUST00000218931.2	785	2	-12	-796	4	0	multi-exon	FALSE	canonical	3	4552	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	False	NA	NA	False	NA	NA	NA	80691039	80688658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80689664_80690451
tx.18140	chr7	-	6200	19	FSM	ENSMUSG00000015709.10	ENSMUST00000085077.5	6151	19	-52	3	5	0	multi-exon	FALSE	canonical	1	1	junction_5	2.23123173644702	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGAGTGCCTTGGACTG	NA	False	NA	NA	False	NA	NA	NA	84059379	83895488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_83899363_83900573_83900711_83911600_83911752_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549_83996764_84003727_84003776_84010761_84010877_84059062
tx.18141	chr7	-	1513	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	66	6	28	-6	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATCTCTGTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	84255084	84234372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
tx.18142	chr7	-	1598	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	78	1279	4	9	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	403	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	84339087	84264252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
tx.18143	chr7	+	3767	18	FSM	ENSMUSG00000030562.18	ENSMUST00000126887.8	3749	18	-28	10	-28	-10	multi-exon	FALSE	canonical	3	4	junction_2	3.42896273924463	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAAATGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	86895828	87047908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_86896111_86896695_86896792_86944995_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
tx.18144	chr7	+	3766	18	FSM	ENSMUSG00000030562.18	ENSMUST00000032781.14	3753	18	-13	0	-13	0	multi-exon	FALSE	canonical	2	6	junction_2	3.12706679058871	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTGTGGAATTTCTA	NA	False	NA	NA	False	NA	NA	NA	86895843	87047918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_86896111_86896695_86896792_86944991_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
tx.18145	chr7	+	1887	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	30	576	-19	-576	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	423	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTCTTTCTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	87927322	87959520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
tx.18146	chr7	+	1460	3	FSM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	3	114	3	-114	multi-exon	FALSE	canonical	3	30	junction_1	4.5	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGTTTCTGATATTAC	NA	False	NA	NA	False	NA	NA	NA	88079483	88140666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_88079812_88099688_88099970_88139815
tx.18147	chr7	-	3374	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	13	313	13	-313	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCATTTCTGTGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	88987982	88789234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
tx.18148	chr7	+	6714	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	3	3	3	-3	multi-exon	FALSE	canonical	3	13	junction_1	0	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGTGTGTGCATTGGTG	NA	False	NA	NA	False	NA	NA	NA	89053565	89062339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_89054180_89056239
tx.18149	chr7	-	814	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	8	-16	8	0	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	NA	False	NA	NA	NA	89590399	89567895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
tx.1815	chr10	-	929	3	FSM	ENSMUSG00000035215.10	ENSMUST00000217781.2	646	3	-175	-108	-5	0	multi-exon	FALSE	canonical	3	4365	junction_1	93.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	False	NA	NA	False	NA	NA	NA	80691032	80688658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80688935_80689591_80689664_80690451
tx.18150	chr7	-	1049	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	16	1159	11	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	230	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	NA	False	NA	NA	NA	89590396	89567895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
tx.18151	chr7	-	2353	6	FSM	ENSMUSG00000062797.15	ENSMUST00000078918.10	1053	6	-135	-1165	-2	-9	multi-exon	FALSE	canonical	3	19	junction_4	509.123403508422	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTCAGTTATGTACCT	NA	False	NA	NA	False	NA	NA	NA	89590409	89566745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89579527_89579669_89584934_89585173_89590176
tx.18152	chr7	-	2027	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	11	22	11	-16	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	1189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTTGTAATGTTTACT	NA	False	NA	NA	False	NA	NA	NA	89630173	89603883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
tx.18153	chr7	-	1935	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	14	-16	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	335	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTTGTAATGTTTACT	NA	False	NA	NA	False	NA	NA	NA	89630170	89603883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
tx.18154	chr7	+	3487	19	NIC	ENSMUSG00000039361.12	novel	3511	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_13	32.2637663220516	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACGGTGTTCTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	89779437	89858140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
tx.18155	chr7	+	3797	20	NIC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	45.9396207370349	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAAGAATAATGTCTG	NA	False	NA	NA	False	NA	NA	NA	89779431	89858309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
tx.18156	chr7	+	3649	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	17	-177	0	6	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGTCTGAATTCTTG	NA	False	NA	NA	False	NA	NA	NA	89779437	89858317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
tx.18157	chr7	+	2685	3	FSM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-864	-930	76	644	multi-exon	FALSE	canonical	3	58	junction_1	21.5	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTTACTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	90092012	90095956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_90093296_90093507_90093586_90094632
tx.18158	chr7	+	2808	3	ISM	ENSMUSG00000051451.7	ENSMUST00000208379.2	1269	4	-1082	1246	68	644	5prime_fragment	FALSE	canonical	0	0	junction_1	50.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTTACTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	90092004	90095956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_90093411_90093507_90093586_90094632
tx.18159	chr7	+	3882	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-885	-1617	64	0	multi-exon	FALSE	canonical	3	101	junction_1	0	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGTGTCTTAAAATAGA	NA	False	NA	NA	False	NA	NA	NA	90092000	90096929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_90093586_90094632
tx.1816	chr10	-	473	4	NNC	ENSMUSG00000035215.10	novel	468	4	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	2086.65489879536	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCCTCCCTTCCTGCTC	NA	False	NA	NA	False	NA	NA	NA	80691039	80688667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_80688935_80689591_80689664_80690451_80690561_80691014
tx.18160	chr7	+	1948	4	FSM	ENSMUSG00000051451.7	ENSMUST00000207252.2	873	4	-1075	0	83	0	multi-exon	FALSE	canonical	3	27	junction_3	30.3424894606007	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGTGTCTTAAAATAGA	NA	False	NA	NA	False	NA	NA	NA	90092019	90096929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_90093296_90093507_90093586_90094632_90094702_90096404
tx.18161	chr7	+	3765	3	FSM	ENSMUSG00000051451.7	ENSMUST00000209102.2	789	3	-1388	-1588	66	1315	multi-exon	FALSE	canonical	3	27	junction_2	37	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAATTGAATTATGCAT	NA	False	NA	NA	False	NA	NA	NA	90092002	90098517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_90093586_90094632_90094702_90096404
tx.18162	chr7	-	766	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	28	5	7	-5	multi-exon	FALSE	canonical	3	739	junction_4	32.5297940356222	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGTCTGCAACATTAAAA	1673	False	NA	NA	False	NA	NA	NA	90106409	90099912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
tx.18163	chr7	-	3537	4	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	3	879	intron_retention	FALSE	canonical	3	242	junction_2	12.657891697365	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAACCTCGAGTCTGACC	6029	False	NA	NA	False	NA	NA	NA	90125200	90115766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_90118890_90119972_90120167_90121805_90121928_90125102
tx.18164	chr7	-	2252	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	7	0	1	0	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCATGGAGGTCCCTG	6027	False	NA	NA	False	NA	NA	NA	90125202	90116645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
tx.18165	chr7	+	1248	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	347	1	347	-1	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTGTAAATGTGTTA	NA	False	NA	NA	False	NA	NA	NA	92210703	92231501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
tx.18166	chr7	-	7826	15	ISM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	1558	174	1527	-174	3prime_fragment	FALSE	canonical	3	109	junction_14	50.802739762211	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTTGGTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	92317584	92292924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947
tx.18167	chr7	-	3115	9	ISM	ENSMUSG00000041328.17	ENSMUST00000151177.2	4731	13	4976	-548	4976	-169	3prime_fragment	FALSE	canonical	3	164	junction_7	31.850971335267	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTGTATTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	92307769	92292919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515
tx.18168	chr7	-	4178	12	ISM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	8490	169	2093	-169	3prime_fragment	FALSE	canonical	3	110	junction_9	48.895232913372	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTGTATTTCTTGA	NA	False	NA	53	True	NA	NA	NA	92310652	92292919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166
tx.18169	chr7	-	6220	16	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	-1	-169	intron_retention	FALSE	canonical	3	46	junction_9	61.6724681955679	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTGTATTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	92319143	92292919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
tx.1817	chr10	+	2877	15	NIC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	9.35387074740632	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	NA	False	NA	NA	NA	80691103	80704542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
tx.18170	chr7	-	5814	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	12	169	12	-169	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTGTATTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	92319130	92292919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
tx.18171	chr7	+	1518	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	53	7885	-11	3	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCAGTCTTCTTCAGT	NA	False	NA	NA	False	NA	NA	NA	92390863	92485858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
tx.18172	chr7	-	3460	7	FSM	ENSMUSG00000030641.11	ENSMUST00000208356.2	840	7	4	-2624	-1	0	multi-exon	FALSE	canonical	3	86	junction_4	58.4648517392193	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	NA	False	NA	NA	NA	92523441	92506732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92521969_92522053_92523348
tx.18173	chr7	-	3373	6	FSM	ENSMUSG00000030641.11	ENSMUST00000032877.11	3387	6	14	0	-1	0	multi-exon	FALSE	canonical	3	123	junction_4	35.6168499449348	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	NA	False	NA	NA	NA	92523441	92506732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
tx.18174	chr7	+	2285	9	NNC	ENSMUSG00000061119.8	novel	2967	9	NA	NA	67	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0403074366291	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAATGTACTTCTGTTCA	NA	False	NA	NA	False	NA	NA	NA	92523744	92583234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_92523869_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
tx.18175	chr7	+	2388	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	10	569	10	0	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTGAAAAAGTAGAATG	NA	False	NA	NA	False	NA	NA	NA	92524469	92583222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
tx.18176	chr7	+	2003	7	ISM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	29858	575	29810	-6	3prime_fragment	FALSE	canonical	3	101	junction_1	10.0332779621949	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCATTTATTGAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	92554317	92583216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
tx.18177	chr7	+	7170	4	ISM	ENSMUSG00000048078.17	ENSMUST00000107166.8	13172	33	682363	5	96359	-5	3prime_fragment	FALSE	canonical	3	20	junction_2	4.32049379893857	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGGTGTGCAGTGGCCT	9478	False	NA	NA	False	NA	NA	NA	96542206	96560295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_96542363_96543859_96545475_96552051_96552195_96555039
tx.18178	chr7	+	6047	3	ISM	ENSMUSG00000048078.17	ENSMUST00000107166.8	13172	33	684988	0	98984	0	3prime_fragment	FALSE	canonical	3	20	junction_1	4	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCAGTGGCCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	96544831	96560300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_96545475_96552051_96552195_96555039
tx.18179	chr7	+	2207	14	NIC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	3	523	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	27.7429024987159	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAGAAGTTATTTTTAA	7361	False	NA	NA	False	NA	NA	NA	96600730	96712702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_96600863_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
tx.1818	chr10	+	2848	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	21	0	15	0	multi-exon	FALSE	canonical	3	19	junction_5	7.35298079221021	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	NA	False	NA	NA	NA	80691129	80704542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
tx.18180	chr7	+	2482	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	34	1262	18	524	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAGTTATTTTTAAA	7376	False	NA	NA	False	NA	NA	NA	96600745	96712703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
tx.18181	chr7	+	2971	2	FSM	ENSMUSG00000044952.6	ENSMUST00000054107.6	2966	2	-5	0	-5	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGTCTGCTTCCA	NA	False	NA	NA	False	NA	NA	NA	96981528	96999420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_96981579_96996499
tx.18182	chr7	+	1973	13	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	6	-26	combination_of_known_junctions	TRUE	canonical	3	13	junction_9	36.0380778560061	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAAAGTGTTTTGGGTCC	NA	False	NA	NA	False	NA	NA	NA	97020818	97041366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
tx.18183	chr7	+	2002	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	8	29	8	-29	multi-exon	FALSE	canonical	3	93	junction_8	19.8289560996034	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCAAAGTGTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	97020820	97041363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
tx.18184	chr7	+	986	8	ISM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	12	8311	12	-7775	5prime_fragment	FALSE	canonical	3	115	junction_7	14.6175739911846	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCCCGTGTTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	97020824	97033081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892
tx.18185	chr7	+	606	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	72	5	-28	-5	multi-exon	FALSE	canonical	3	2164	junction_2	233	379	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGTTCCTTTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	97049281	97057004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_97049565_97056072_97056217_97056825
tx.18186	chr7	-	1090	2	FSM	ENSMUSG00000035686.9	ENSMUST00000043077.8	1277	2	191	-4	-20	4	multi-exon	FALSE	canonical	3	27	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTGGTCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	97066746	97062140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_97062723_97066238
tx.18187	chr7	+	3187	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	56	-3	-1	2	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	545	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	989	False	NA	NA	False	NA	NA	NA	97130218	97190604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
tx.18188	chr7	-	879	5	FSM	ENSMUSG00000035642.17	ENSMUST00000154853.8	883	5	4	0	4	0	multi-exon	FALSE	canonical	3	45	junction_3	23.5902522241709	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGTTGAGAGCATTAG	NA	False	NA	NA	False	NA	NA	NA	97228699	97199546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97228572
tx.18189	chr7	-	768	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	12	9	1	0	multi-exon	FALSE	canonical	3	37	junction_3	30.4740326617051	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGTTGAGAGCATTAG	NA	False	NA	NA	False	NA	NA	NA	97228692	97199546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
tx.1819	chr10	+	3578	14	ISM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	29	1	23	-1	intron_retention	FALSE	canonical	3	19	junction_5	6.4925993372336	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCCTCCTGTCCTGTGA	NA	False	NA	NA	False	NA	NA	NA	80691137	80704541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
tx.18190	chr7	+	4780	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-12	6356	-4	2	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCATAGATGATGATTA	NA	False	NA	NA	False	NA	NA	NA	97229091	97335629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
tx.18191	chr7	+	4168	11	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	81132	5985	-1523	185	3prime_fragment	FALSE	canonical	3	124	junction_7	10.590561835899	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTGAAATGAGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	97310235	97336000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
tx.18192	chr7	+	1471	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	32	1	-29	-1	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	864	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCTGTGATTTTGCTC	NA	False	NA	NA	False	NA	NA	NA	97345872	97368085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
tx.18193	chr7	-	3497	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	228	12	-123	-12	multi-exon	FALSE	canonical	3	30	junction_1	4.5	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAGAAATTTAATGT	NA	False	NA	NA	False	NA	NA	NA	97387268	97373224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_97375912_97378177_97378295_97386575
tx.18194	chr7	+	3319	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	-33	-492	-33	-6	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTACAGGAAGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	97437714	97561582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
tx.18195	chr7	+	3318	15	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-34	-5	combination_of_known_splicesites	TRUE	canonical	3	45	junction_1	51.4204358644479	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACAGGAAGTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	97437713	97561583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_97438182_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
tx.18196	chr7	+	3523	16	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	74.1309352130105	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	97437720	97561588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_97438182_97480061_97480266_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
tx.18197	chr7	+	3061	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	2	2	2	-2	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGAAGTGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	97492143	97561586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
tx.18198	chr7	-	4495	13	FSM	ENSMUSG00000035547.15	ENSMUST00000107112.2	2232	13	-166	-2097	-166	-5	multi-exon	FALSE	canonical	2	4	junction_12	45.8223471681668	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCTGTCTGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	97811715	97770770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97811482
tx.18199	chr7	-	3481	8	ISM	ENSMUSG00000035547.15	ENSMUST00000107112.2	2232	13	30525	-2097	30393	-5	3prime_fragment	FALSE	canonical	3	144	junction_6	14.4165437846204	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCTGTCTGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	97781024	97770770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882
tx.182	chr1	-	7269	16	FSM	ENSMUSG00000026110.16	ENSMUST00000151952.8	7251	16	-20	2	-20	-2	multi-exon	FALSE	canonical	2	9	junction_15	49.471158825679	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTGGATAGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	37580117	37478422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119_37575486_37580045
tx.1820	chr10	-	594	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	172	459	-12	-5	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	660	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCGTGTCACCTCACTG	5620	False	NA	NA	False	NA	NA	NA	80736631	80735742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80736094_80736315_80736385_80736457
tx.18200	chr7	-	4444	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	48	6	48	-6	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGATCTGTCTGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	97827433	97770771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
tx.18201	chr7	-	3705	9	ISM	ENSMUSG00000035547.15	ENSMUST00000107112.2	2232	13	29336	-2095	29204	-7	3prime_fragment	FALSE	canonical	3	144	junction_6	14.3853223808158	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGATCTGTCTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	97782213	97770772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039
tx.18202	chr7	-	3911	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	7	7422	-3	-153	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	184	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGTTTTGGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	97958738	97863017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
tx.18203	chr7	-	2565	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	-58	-197	-18	-3	multi-exon	FALSE	canonical	3	40	junction_1	0	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAGCATTTGCTGACAA	NA	False	NA	NA	False	NA	NA	NA	98010553	97999877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_98002338_98010448
tx.18204	chr7	-	7716	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	-24	1	-20	-1	multi-exon	TRUE	canonical	3	39	junction_14	16.3198636678896	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTGAATTTTAAAGACTC	3482	False	NA	NA	False	NA	NA	NA	98306010	98236344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.18205	chr7	-	6002	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	22.5075542873943	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGGAAATAAGAACAAACT	3728	False	NA	NA	False	NA	NA	NA	98305764	98238140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.18206	chr7	-	5219	19	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.2454017531745	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATCAGGAAATAAGAACAAA	3701	False	NA	NA	False	NA	NA	NA	98305791	98238142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.18207	chr7	-	5391	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-20	-569	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	19.749113904173	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTTGAACTGTATATA	3482	False	NA	NA	False	NA	NA	NA	98306010	98238711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.18208	chr7	-	5509	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-65	-565	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	21.2537759395772	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3437	False	NA	NA	False	NA	NA	NA	98306055	98238707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.18209	chr7	-	4660	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	0	-570	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	20.2039752841848	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTGAACTGTATAT	3690	False	NA	NA	False	NA	NA	NA	98305802	98238712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.1821	chr10	-	3376	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	-6	0	-6	0	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	507	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGAGTAGATCTTCA	3105	False	NA	NA	False	NA	NA	NA	80754085	80737197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
tx.18210	chr7	-	5857	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	19.5153144991312	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGATCAGGAAATAAGA	3691	False	NA	NA	False	NA	NA	NA	98305801	98238147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.18211	chr7	-	5098	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	0	-570	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	18.2976082900417	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTGAACTGTATAT	3690	False	NA	NA	False	NA	NA	NA	98305802	98238712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.18212	chr7	-	5217	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-75	-756	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	21.478198699858	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGCAGGTGTGGTCTT	3427	False	NA	NA	False	NA	NA	NA	98306065	98238898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.18213	chr7	+	3822	6	FSM	ENSMUSG00000030753.16	ENSMUST00000126356.8	1123	6	-4	-2695	-4	0	multi-exon	FALSE	canonical	3	28	junction_2	87.2958189147682	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	98352305	98367269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
tx.18214	chr7	+	3726	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	406	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	98352306	98367269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
tx.18215	chr7	+	1767	6	NIC	ENSMUSG00000015957.13	novel	3451	7	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	8.48528137423857	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGTGAAATAAATGC	NA	False	NA	NA	False	NA	NA	NA	98484317	98503022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_98484556_98488214_98488398_98495580_98495817_98496380_98496495_98499433_98499727_98502319
tx.18216	chr7	-	2783	10	NNC	ENSMUSG00000035354.10	novel	3147	11	NA	NA	-15776	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	50.8374315287903	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	NA	False	NA	NA	NA	98681627	98535956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681491
tx.18217	chr7	-	2866	10	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-15779	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	49.6083425879255	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTTCCCCCCCAGCT	NA	False	NA	NA	False	NA	NA	NA	98681630	98535954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681413
tx.18218	chr7	-	3431	15	FSM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	0	1726	0	3	multi-exon	FALSE	canonical	3	139	junction_11	14.4016722385043	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTTCCCCCCCAGCTT	NA	False	NA	NA	False	NA	NA	NA	98790348	98535953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
tx.18219	chr7	-	3396	14	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	2	5	combination_of_known_splicesites	FALSE	canonical	3	4	junction_12	45.2728741753235	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCCCCCCCAGCTTTG	NA	False	NA	NA	False	NA	NA	NA	98790346	98535951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98767394_98767513_98790040
tx.1822	chr10	-	3445	11	NIC	ENSMUSG00000062075.14	novel	3370	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	226	junction_7	23.5501592351305	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGAGTAGATCTTCA	3105	False	NA	NA	False	NA	NA	NA	80754085	80737197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
tx.18220	chr7	-	2263	8	FSM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	97	junction_4	10.965623464226	149	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGTTGCTTAATGC	NA	False	NA	NA	False	NA	NA	NA	98831927	98802864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98818904_98819034_98831598
tx.18221	chr7	-	1778	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	2	0	2	0	multi-exon	FALSE	canonical	3	105	junction_3	4.4	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	98887824	98868290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
tx.18222	chr7	+	2520	4	FSM	ENSMUSG00000055407.15	ENSMUST00000208924.2	2906	4	386	0	12	0	multi-exon	FALSE	canonical	0	0	junction_3	32.8768746825012	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	98917564	98986344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_98918521_98964895_98965110_98966678_98966876_98985191
tx.18223	chr7	+	4043	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	877	0	20	0	multi-exon	FALSE	canonical	3	32	junction_2	24	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTCTTGATCGTATTT	NA	False	NA	NA	False	NA	NA	NA	98917572	98969559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_98918521_98964895_98965110_98966678
tx.18224	chr7	+	2318	3	FSM	ENSMUSG00000055407.15	ENSMUST00000107100.3	2335	3	17	0	17	0	multi-exon	FALSE	canonical	3	44	junction_2	18	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	98917569	98986344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_98918521_98964895_98965110_98985191
tx.18225	chr7	-	2051	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	125	39	0	-33	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	2139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	NA	False	NA	NA	NA	99002321	98994634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
tx.18226	chr7	+	3717	18	FSM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	1	893	1	-1	multi-exon	FALSE	canonical	1	1	junction_3	3.03839331062234	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	NA	False	NA	NA	False	NA	NA	NA	99030621	99110191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
tx.18227	chr7	-	833	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	86	989	-1	-3	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	3772	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCTGACTGGATTGTG	8421	False	NA	NA	False	NA	NA	NA	99132859	99128091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
tx.18228	chr7	+	7108	16	FSM	ENSMUSG00000018909.16	ENSMUST00000098266.9	7132	16	22	2	22	-2	multi-exon	FALSE	canonical	3	7	junction_3	4.9486249493055	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGCTGTGTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	99184694	99255976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_99185006_99231467_99231499_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
tx.18229	chr7	-	4020	14	FSM	ENSMUSG00000030737.18	ENSMUST00000107088.8	4369	14	327	22	327	-22	multi-exon	FALSE	canonical	0	0	junction_5	2.1483446221183	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTCTTCCACGACAAA	NA	False	NA	NA	False	NA	NA	NA	99356041	99307617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090_99335325_99338069_99338233_99339638_99339777_99340963_99341101_99355717
tx.1823	chr10	+	1283	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	1	0	1	0	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	249	False	NA	NA	False	NA	NA	NA	80765907	80768038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
tx.18230	chr7	-	1494	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	77	1338	-1	-3	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	1021	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGGAGTCTTGAAAG	NA	False	NA	NA	False	NA	NA	NA	99508107	99488113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
tx.18231	chr7	-	6671	5	ISM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	24907	0	10193	0	3prime_fragment	FALSE	canonical	3	16	junction_4	5.30919014539883	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTATTTCTGATCAGTC	NA	False	NA	NA	False	NA	NA	NA	99604748	99569460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673
tx.18232	chr7	-	7148	6	FSM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	-6	5	-6	-5	multi-exon	FALSE	canonical	3	16	junction_4	4.83321838943783	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACAGACTATTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	99629661	99569465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
tx.18233	chr7	-	3003	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	66	0	-33	0	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	1016	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	99770706	99731317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
tx.18234	chr7	-	2992	12	NNC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_4	154.789059343876	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGTGCGAGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	99770693	99731318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742692_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
tx.18235	chr7	+	2626	14	FSM	ENSMUSG00000030729.18	ENSMUST00000084935.11	8834	14	-13	6221	-13	-4763	multi-exon	TRUE	canonical	2	3	junction_8	2.32557176274323	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGTTCCAGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	99876587	99921853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_99877242_99899498_99899667_99901391_99901499_99902439_99902525_99904740_99904825_99909090_99909285_99910806_99910997_99911272_99911371_99912117_99912296_99915871_99915966_99916692_99916823_99917323_99917514_99919534_99919669_99921533
tx.18236	chr7	-	2431	14	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	101.852195962999	585	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGAGGAGCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	100021173	99975943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004007_100004472_100004569_100020929
tx.18237	chr7	+	7779	33	FSM	ENSMUSG00000047248.21	ENSMUST00000051777.15	7803	33	26	-2	13	0	multi-exon	TRUE	canonical	3	28	junction_15	6.6496446098645	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTACAAGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	100021465	100119359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100103809_100104699_100108983_100109096_100118585
tx.18238	chr7	+	1591	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	2	2395	2	323	multi-exon	TRUE	canonical	3	366	junction_1	56.4938140012529	224	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	NA	False	NA	NA	NA	100142545	100148832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
tx.18239	chr7	-	2292	7	ISM	ENSMUSG00000030708.15	ENSMUST00000130534.8	1159	8	1572	-1299	-46	-6	3prime_fragment	FALSE	canonical	3	16	junction_5	19.1020650425259	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCATGTTACTGTGCCA	NA	False	NA	NA	False	NA	NA	NA	100161034	100150928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100156582_100156741_100159901_100160064_100160956
tx.1824	chr10	-	3368	4	FSM	ENSMUSG00000048240.15	ENSMUST00000092285.10	3362	4	-8	2	-8	-2	multi-exon	FALSE	canonical	2	3	junction_3	3.68178700572909	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTCGACTCTAAATTAT	4436	False	NA	NA	False	NA	NA	NA	80850767	80784459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80787581_80788664_80788781_80833825_80833879_80850689
tx.18240	chr7	-	2140	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	2969	-1365	-46	0	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTACTGTGCCATACACA	NA	False	NA	NA	False	NA	NA	NA	100161034	100150922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
tx.18241	chr7	+	835	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	-4	560	-4	30	multi-exon	FALSE	canonical	3	255	junction_1	0	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAAGTGCCTCTATCT	7567	False	NA	NA	False	NA	NA	NA	100186302	100189016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100186400_100188278
tx.18242	chr7	-	925	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	-6	3366	2	120	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTTTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	100232315	100198323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
tx.18243	chr7	+	3100	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	112	2	8	-2	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	827	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGTTCACATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	100256904	100290473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
tx.18244	chr7	+	3100	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	8	2	8	-2	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	454	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGTTCACATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	100256904	100290473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
tx.18245	chr7	-	1800	7	FSM	ENSMUSG00000030701.18	ENSMUST00000107044.10	1806	7	8	-2	8	0	multi-exon	FALSE	canonical	3	13	junction_3	4.3365372770859	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGCTTTGCTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	100307655	100293104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100307499
tx.18246	chr7	+	6591	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-70	-2444	15	-30	multi-exon	TRUE	canonical	3	35	junction_2	3.48173074484398	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100355856	100490833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
tx.18247	chr7	-	2996	11	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	10.0179838290946	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGAGCTTTTTTTCTGT	2195	False	NA	NA	False	NA	NA	NA	100512616	100495053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512318
tx.18248	chr7	-	2486	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	42	323	2	-323	multi-exon	FALSE	canonical	3	27	junction_8	6.09590026165127	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2200	False	NA	NA	False	NA	NA	NA	100512611	100495376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
tx.18249	chr7	-	8261	21	FSM	ENSMUSG00000032875.9	ENSMUST00000107032.3	10190	21	-451	2380	-451	3	multi-exon	FALSE	canonical	2	6	junction_5	4.18658572108586	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTCCCCCGGGCCTT	9092	False	NA	NA	False	NA	NA	NA	100581765	100521338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100577775
tx.1825	chr10	-	3646	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	145	5	1	-2	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTATTTATTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	80873115	80864376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
tx.18250	chr7	-	3030	3	FSM	ENSMUSG00000032860.6	ENSMUST00000037540.5	3011	3	-19	0	-19	0	multi-exon	FALSE	canonical	2	2	junction_1	4	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCATTTTGTTG	3084	False	NA	NA	False	NA	NA	NA	100661224	100645774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_100648308_100652770_100652962_100660918
tx.18251	chr7	+	4548	20	FSM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	-210	-22	-168	-1	multi-exon	FALSE	canonical	0	0	junction_17	7.64481610612047	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTGTCCTGATAAAGA	NA	False	NA	NA	False	NA	NA	NA	100757771	100933611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100758247_100759945_100760044_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
tx.18252	chr7	-	2351	16	NIC	ENSMUSG00000047767.18	novel	2083	17	NA	NA	-1	1	intron_retention	FALSE	canonical	3	10	junction_9	7.29383301152419	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCCTCTTTGAAGCAT	8413	False	NA	NA	False	NA	NA	NA	100951259	100938822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
tx.18253	chr7	-	2073	17	FSM	ENSMUSG00000047767.18	ENSMUST00000122116.8	2083	17	11	-1	-9	1	multi-exon	FALSE	canonical	3	10	junction_10	7.54750579661917	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCCTCTTTGAAGCAT	8405	False	NA	NA	False	NA	NA	NA	100951267	100938822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
tx.18254	chr7	+	1433	7	FSM	ENSMUSG00000030688.16	ENSMUST00000032927.14	1400	7	-33	0	-33	0	multi-exon	TRUE	canonical	3	28	junction_2	26.7581763205193	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTCTTTGTGCCTGCT	NA	False	NA	NA	False	NA	NA	NA	100970286	100995515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
tx.18255	chr7	+	5125	34	FSM	ENSMUSG00000032812.19	ENSMUST00000107010.9	5147	34	22	0	22	0	multi-exon	FALSE	canonical	3	35	junction_3	24.8085044217444	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	NA	False	NA	NA	NA	100997295	101061101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
tx.18256	chr7	+	2979	21	FSM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	21	693	21	-1	multi-exon	FALSE	canonical	3	23	junction_1	25.1838738084513	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	101043595	101061100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
tx.18257	chr7	+	4024	30	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	751	-2	-45	0	3prime_fragment	TRUE	canonical	0	0	junction_1	2.53630007564597	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCACAGGAGGTTGTC	7599	False	NA	NA	False	NA	NA	NA	101100477	101162026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_101100676_101130577_101130668_101133748_101133838_101143777_101143888_101144843_101144900_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
tx.18258	chr7	+	2157	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	116	2354	-8	4	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	1171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTTGCCCTCATGCCT	NA	False	NA	NA	False	NA	NA	NA	101312955	101437021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
tx.18259	chr7	-	4739	29	FSM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	-21	12	-21	2	multi-exon	FALSE	canonical	3	95	junction_28	22.1558429663829	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGGAAAAGGAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	101487031	101471857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
tx.1826	chr10	-	1971	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	-2	-5	1	3	multi-exon	TRUE	canonical	3	688	junction_11	105.465203223192	708	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTCCTGTGTCAG	4770	False	NA	NA	False	NA	NA	NA	80896014	80879905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
tx.18260	chr7	-	4648	28	ISM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	839	12	1	2	3prime_fragment	FALSE	canonical	3	134	junction_22	18.3629017075757	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGGAAAAGGAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	101486171	101471857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777
tx.18261	chr7	-	5304	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_28	28.1340631655664	32	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAACCATTTTGTTCCG	NA	False	NA	NA	False	NA	NA	NA	101487026	101471848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
tx.18262	chr7	-	931	4	FSM	ENSMUSG00000001827.13	ENSMUST00000106981.8	960	4	13	16	13	-16	multi-exon	FALSE	canonical	3	303	junction_2	18.9267594221045	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTATGAATTATTTG	8111	False	NA	NA	False	NA	NA	NA	101513339	101507553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131
tx.18263	chr7	-	1220	5	ISM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	1960	15	-56	-15	3prime_fragment	FALSE	canonical	3	257	junction_4	35.4788669492136	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTATGAATTATTTGG	3520	False	NA	NA	False	NA	NA	NA	101517930	101507552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604
tx.18264	chr7	+	828	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-29	2304	-20	1	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	7797	False	NA	NA	False	NA	NA	NA	101545594	101548752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
tx.18265	chr7	+	3296	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-50	-2309	-30	2	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	7787	False	NA	NA	False	NA	NA	NA	101545584	101551054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
tx.18266	chr7	+	1127	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-12	4	-12	-4	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	449	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACCTGCTCTGTCCTGCC	7015	False	NA	NA	False	NA	NA	NA	101555098	101561106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
tx.18267	chr7	+	7091	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	65.3807226091062	181	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2093	False	NA	NA	False	NA	NA	NA	101583317	101664166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
tx.18268	chr7	+	7196	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	10	4	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	69.0609131290792	138	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2130	False	NA	NA	False	NA	NA	NA	101583354	101664166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
tx.18269	chr7	+	4766	12	ISM	ENSMUSG00000066306.14	ENSMUST00000084852.13	7180	25	29474	5	-1870	4	3prime_fragment	FALSE	canonical	3	317	junction_2	41.2496932119821	131	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	NA	False	NA	NA	False	NA	NA	NA	101648501	101664166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
tx.1827	chr10	+	2441	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	52	339	-40	-339	multi-exon	TRUE	canonical	3	459	junction_3	51.2387521532504	846	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5502	False	NA	NA	False	NA	NA	NA	80905920	80918054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
tx.18270	chr7	-	2139	8	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	128.061050491792	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCTTTTTTTTTTTGC	NA	False	NA	NA	False	NA	NA	NA	101714364	101668344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101684513_101684669_101688756_101688899_101691833_101691872_101714272
tx.18271	chr7	-	2202	9	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	120.056692337412	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTTTTTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	101714364	101668343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101714272
tx.18272	chr7	-	2356	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	0	-12	0	-3	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	101714676	101668346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
tx.18273	chr7	-	2238	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	5	6	5	-6	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	315	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCATTTGCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	101714360	101668349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
tx.18274	chr7	+	3231	11	FSM	ENSMUSG00000099481.7_ENSMUSG00000100254.2	ENSMUST00000094130.4	2298	11	-256	-677	-9	-4	multi-exon	FALSE	canonical	3	50	junction_1	17.4482090771517	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTATGTGTTGCCGATC	NA	False	NA	NA	False	NA	NA	NA	101714708	101732965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
tx.18275	chr7	+	3134	10	FSM	ENSMUSG00000099481.7	ENSMUST00000106950.8	3131	10	-6	3	-6	-3	multi-exon	FALSE	canonical	2	5	junction_1	31.0606734006004	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGTGTTGCCGATCT	NA	False	NA	NA	False	NA	NA	NA	101714711	101732966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101715012_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
tx.18276	chr7	+	3196	11	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	-7	-5	intron_retention	FALSE	canonical	2	17	junction_2	28.6462912084619	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTATGTGTTGCCGAT	NA	False	NA	NA	False	NA	NA	NA	101714710	101732964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
tx.18277	chr7	+	3104	11	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	9	-4	intron_retention	FALSE	canonical	3	7	junction_1	28.9048438847194	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTATGTGTTGCCGATC	NA	False	NA	NA	False	NA	NA	NA	101714973	101732965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_+_101715150_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
tx.18278	chr7	-	6620	33	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-5	-2	combination_of_known_junctions	TRUE	canonical	3	48	junction_9	39.344581504319	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTGGTATTGACTTT	9991	False	NA	NA	False	NA	NA	NA	101859362	101768606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
tx.18279	chr7	-	4053	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-24	-281	10	6	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGGAAAATCCATTCTA	9980	False	NA	NA	False	NA	NA	NA	101859373	101783403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
tx.1828	chr10	+	1559	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	1	-4	1	4	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	582	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGCTCCTGCCCATT	1133	False	NA	NA	False	NA	NA	NA	80941781	80959721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
tx.18280	chr7	-	4064	23	NIC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	-33	4	combination_of_known_junctions	FALSE	canonical	3	26	junction_22	30.1171610287184	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	9946	False	NA	NA	False	NA	NA	NA	101859107	101783405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
tx.18281	chr7	+	2206	7	NIC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-31	2	intron_retention	FALSE	canonical	3	7	junction_1	59.4065559419909	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGAGGTAGGTATGTT	NA	False	NA	NA	False	NA	NA	NA	101859510	101887769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_101859799_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
tx.18282	chr7	+	2023	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	8	3	8	-3	multi-exon	FALSE	canonical	3	53	junction_5	43.1689188601655	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	602	False	NA	NA	False	NA	NA	NA	101872242	101887771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
tx.18283	chr7	+	2034	7	FSM	ENSMUSG00000030990.19	ENSMUST00000033292.14	1201	7	-33	-800	8	3	multi-exon	FALSE	canonical	3	107	junction_5	27.0657635317306	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGAGGTAGGTATGTTG	602	False	NA	NA	False	NA	NA	NA	101872242	101887770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
tx.18284	chr7	-	1261	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	8	0	8	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCTCCCTATGTG	6368	False	NA	NA	False	NA	NA	NA	101899322	101888329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_101889520_101899251
tx.18285	chr7	+	3430	12	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-541	-6	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_10	21.4830319358564	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGCTGGCTGTGACT	NA	False	NA	NA	False	NA	NA	NA	101916471	102086519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
tx.18286	chr7	+	3519	13	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-535	-4	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	14.8847423745107	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTGGCTGTGACTCT	NA	False	NA	NA	False	NA	NA	NA	101916477	102086521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
tx.18287	chr7	+	4110	12	FSM	ENSMUSG00000030987.6	ENSMUST00000033289.6	4085	12	-25	0	-25	0	multi-exon	FALSE	canonical	2	5	junction_10	17.5852116683732	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	NA	False	NA	NA	NA	101916987	102086525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
tx.18288	chr7	+	4683	13	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	-505	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.93856620135735	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	NA	False	NA	NA	NA	101916507	102086525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
tx.18289	chr7	+	3039	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	113	845	-75	244	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	1790	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTACTAAACTTGT	NA	False	NA	NA	False	NA	NA	NA	102091014	102118133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
tx.1829	chr10	+	3836	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	222	-1754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCTGGCCAGTGGCC	NA	False	NA	NA	False	NA	NA	NA	80971275	80986302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_80971357_80979795_80981052_80983803
tx.18290	chr7	-	2789	8	FSM	ENSMUSG00000030966.14	ENSMUST00000033264.12	2793	8	2	2	2	-1	multi-exon	FALSE	canonical	3	11	junction_3	2.61861468283191	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGCTTCTTTCATTCTA	NA	False	NA	NA	False	NA	NA	NA	102214691	102207129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_102208871_102209174_102209276_102209799_102209823_102210994_102211226_102212472_102212569_102212900_102213333_102213478_102213548_102214595
tx.18291	chr7	-	2395	7	FSM	ENSMUSG00000073968.5	ENSMUST00000082175.7	2388	7	-4	-3	-4	3	multi-exon	FALSE	canonical	2	5	junction_6	1.21335164821342	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACGAGTCTGCCTGTCA	NA	False	NA	NA	False	NA	NA	NA	102336538	102326785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_102328045_102328242_102328344_102328880_102328904_102329343_102329605_102330869_102330966_102333254_102333719_102336347
tx.18292	chr7	+	3570	8	FSM	ENSMUSG00000072244.12	ENSMUST00000098180.10	3827	8	10	247	10	-247	multi-exon	FALSE	canonical	2	421	junction_3	109.572825470701	455	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	NA	False	NA	NA	NA	103868011	103884112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
tx.18293	chr7	+	3518	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	15	-248	intron_retention	TRUE	canonical	0	0	junction_8	239.859203492382	376	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	NA	False	NA	NA	NA	103868016	103884111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
tx.18294	chr7	+	3573	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-20	-248	intron_retention	FALSE	canonical	0	0	junction_8	276.31221018985	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	NA	False	NA	NA	NA	103868615	103884111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
tx.18295	chr7	+	3620	8	NIC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-20	-247	intron_retention	FALSE	canonical	2	115	junction_1	215.402423574185	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	NA	False	NA	NA	NA	103868615	103884112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
tx.18296	chr7	+	2509	8	FSM	ENSMUSG00000056144.15	ENSMUST00000060315.12	2590	8	86	-5	52	5	multi-exon	TRUE	canonical	1	1	junction_3	5.3642809587196	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCTGTTCATTTATAT	NA	False	NA	NA	False	NA	NA	NA	103893751	103911446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_103893814_103896737_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909426_103909684_103909712_103910097
tx.18297	chr7	-	1889	2	FSM	ENSMUSG00000062369.3	ENSMUST00000076501.2	1407	2	-80	-402	19	347	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTCGTCTTCCTTATT	NA	False	NA	NA	False	NA	NA	NA	104491791	104489116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_104490898_104491683
tx.18298	chr7	-	3555	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_12	109.915118765952	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	105049229	105027816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
tx.18299	chr7	-	3464	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	-20	-1	10	0	multi-exon	FALSE	canonical	3	83	junction_4	97.8877751760945	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	105049229	105027816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
tx.183	chr1	-	6289	15	FSM	ENSMUSG00000026110.16	ENSMUST00000042161.15	7030	15	-24	765	-8	-765	multi-exon	FALSE	canonical	3	116	junction_2	34.7575421267655	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTACTCTATCACTAGC	NA	False	NA	NA	False	NA	NA	NA	37575340	37479185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119
tx.1830	chr10	+	4862	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	174	902	-104	-902	multi-exon	FALSE	canonical	3	9	junction_1	37	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATCTATAGAACCCA	NA	False	NA	NA	False	NA	NA	NA	80972278	80987154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80972534_80979795_80981052_80983803
tx.18300	chr7	-	3421	12	FSM	ENSMUSG00000044465.20	ENSMUST00000179474.9	10853	12	33	7399	-10	0	multi-exon	TRUE	canonical	3	88	junction_4	97.1164419950871	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	105049228	105027816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
tx.18301	chr7	-	3523	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	-1	-1	-1	0	multi-exon	FALSE	canonical	3	82	junction_12	109.388038905337	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	105049240	105027817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
tx.18302	chr7	-	2853	12	FSM	ENSMUSG00000044465.20	ENSMUST00000118726.8	2855	12	1	1	1	0	multi-exon	FALSE	canonical	3	18	junction_3	116.98315199737	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	NA	False	NA	NA	NA	105049214	105027818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
tx.18303	chr7	+	2518	5	FSM	ENSMUSG00000030898.16	ENSMUST00000033189.6	2573	5	54	1	-32	-1	multi-exon	FALSE	canonical	3	14	junction_2	1.6583123951777	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAAGGCTCAGATTATTC	NA	False	NA	NA	False	NA	NA	NA	105074991	105085545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_105075383_105082789_105083042_105083201_105083452_105083726_105083903_105084096
tx.18304	chr7	+	2381	6	FSM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	28	3	28	-3	multi-exon	FALSE	canonical	3	35	junction_2	5.53534100123922	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGTTCCTATTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	105203594	105207593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_105204045_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
tx.18305	chr7	-	2640	14	FSM	ENSMUSG00000037032.17	ENSMUST00000189378.7	2878	14	257	-19	-42	0	multi-exon	FALSE	canonical	3	117	junction_6	14.1718113410527	270	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	NA	False	NA	NA	NA	105230441	105207690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
tx.18306	chr7	-	2852	12	FSM	ENSMUSG00000036989.17	ENSMUST00000057525.14	3016	12	-16	180	-5	0	multi-exon	FALSE	canonical	3	8	junction_11	13.9497326613206	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	105282783	105259856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282609
tx.18307	chr7	-	4015	11	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	39	junction_8	7.22841614740048	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	105282783	105259856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_105260418_105260535_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
tx.18308	chr7	-	2878	12	FSM	ENSMUSG00000036989.17	ENSMUST00000106789.8	2841	12	-39	2	-5	0	multi-exon	FALSE	canonical	3	39	junction_9	7.22140985754018	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	105282783	105259856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
tx.18309	chr7	-	1992	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	32	0	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGTGAGGTCAATTTG	NA	False	NA	NA	False	NA	NA	NA	105289591	105284827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
tx.1831	chr10	+	4254	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-38	-2375	-38	-1404	multi-exon	FALSE	canonical	3	10	junction_1	36.5	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAGAGAATTGTGGAAT	NA	False	NA	NA	False	NA	NA	NA	80972344	80986652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80972494_80979795_80981052_80983803
tx.18310	chr7	-	1820	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	38	1417	-27	1	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGAGGTCAATTTGT	NA	False	NA	NA	False	NA	NA	NA	105289585	105284826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
tx.18311	chr7	+	581	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	408	2284	16	5	multi-exon	FALSE	canonical	3	351	junction_1	22.5	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTATGGGTACCAGC	NA	False	NA	NA	False	NA	NA	NA	105289670	105290560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_105289830_105289968_105290065_105290234
tx.18312	chr7	+	683	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	14	-3	14	3	multi-exon	FALSE	canonical	3	108	junction_3	126.499011853848	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCTTTCTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	105289668	105291053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
tx.18313	chr7	+	3023	2	FSM	ENSMUSG00000089847.9	ENSMUST00000151193.2	1083	2	-93	-1847	23	0	multi-exon	FALSE	canonical	3	351	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTGTTTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	105289677	105292839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_105289830_105289968
tx.18314	chr7	-	2294	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	282	477	-126	197	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	412	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCGTTGATCTCACT	9861	False	NA	NA	False	NA	NA	NA	105385706	105381413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
tx.18315	chr7	+	1762	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	30	3	30	0	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCGTGTGGGGACAGA	NA	False	NA	NA	False	NA	NA	NA	105385828	105392129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
tx.18316	chr7	+	1668	12	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	375	0	-1	0	3prime_fragment	FALSE	canonical	3	270	junction_7	30.9136360294609	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCGTGTGGGGACAGA	NA	False	NA	NA	False	NA	NA	NA	105386306	105392129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
tx.18317	chr7	-	769	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	11	3501	-8	2	multi-exon	FALSE	canonical	3	1140	junction_4	81.1861287413065	329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGATCCCTCCCATGT	6450	False	NA	NA	False	NA	NA	NA	105393557	105392100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
tx.18318	chr7	-	3584	12	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	82	9	43	-9	3prime_fragment	FALSE	canonical	3	296	junction_11	21.0119997199554	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105401360	105394026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188
tx.18319	chr7	-	3530	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	18	10	0	-10	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	453	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTCTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	105401424	105394027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
tx.1832	chr10	+	4885	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-216	-2806	-216	-958	multi-exon	FALSE	canonical	3	48	junction_1	17.5	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80973570	80987098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80973905_80979795_80981052_80983803
tx.18320	chr7	-	869	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	56	6375	-15	76	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	661	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGGTCTAGTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	105460250	105458787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105459352_105459656_105459726_105460014
tx.18321	chr7	+	3326	11	FSM	ENSMUSG00000016626.11	ENSMUST00000084763.5	3272	11	-46	-8	-46	-1	multi-exon	FALSE	canonical	2	8	junction_7	2.19089023002066	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTGTCATGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	106766150	106797308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_106766289_106780365_106780453_106780877_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353_106796525_106796983
tx.18322	chr7	+	4745	4	Fusion	ENSMUSG00000057215.7_ENSMUSG00000073894.2	novel	1294	6	NA	NA	0	-4402	multi-exon	FALSE	canonical	0	0	junction_1	17.1529071070248	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGTGTTTGTCCCA	NA	False	NA	NA	False	NA	NA	NA	106808651	106895201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_106894609
tx.18323	chr7	+	3872	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-57	2	5	1	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	311	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCGTTGTCTCATTAA	NA	False	NA	NA	False	NA	NA	NA	106969939	107147861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
tx.18324	chr7	+	3489	24	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-153	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	7.22105721461798	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGTGAAACATTTTTA	7092	False	NA	NA	False	NA	NA	NA	107194260	107344092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
tx.18325	chr7	-	2125	9	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	-13	3	intron_retention	FALSE	canonical	3	29	junction_7	8.01171017948103	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAATGTGTGGATATGTA	NA	False	NA	NA	False	NA	NA	NA	107357252	107349168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
tx.18326	chr7	+	1254	8	FSM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	0	1260	0	683	multi-exon	FALSE	canonical	3	2245	junction_2	107.423632105296	1074	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTGATGCGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	108533623	108540898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
tx.18327	chr7	+	5944	12	NIC	ENSMUSG00000031028.15	novel	772	4	NA	NA	-147	-1	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	6.12676016199791	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGTCCTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	108549716	108633666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_108549979_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
tx.18328	chr7	+	7068	10	NIC	ENSMUSG00000031028.15	novel	5997	12	NA	NA	-35	1	intron_retention	FALSE	canonical	3	8	junction_1	5.53774924194538	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCCTTGGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	108609996	108633668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108627078_108628468_108628568_108628760
tx.18329	chr7	+	6011	12	FSM	ENSMUSG00000031028.15	ENSMUST00000033341.12	5997	12	-14	0	-14	0	multi-exon	FALSE	canonical	3	8	junction_1	5.29306422836714	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGTCCTTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	108610017	108633667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
tx.1833	chr10	+	3152	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4027	1133	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGGTAGAATCCACTT	NA	False	NA	NA	False	NA	NA	NA	80977813	80985425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_80978088_80979795_80981052_80983803
tx.18330	chr7	-	6241	5	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	62	junction_1	2.23606797749979	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATTCAAAAAGTCACTT	NA	False	NA	NA	False	NA	NA	NA	108682532	108633518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108657217_108682369
tx.18331	chr7	-	4072	6	FSM	ENSMUSG00000048330.15	ENSMUST00000120876.2	1633	6	8	-2447	-3	-1189	multi-exon	FALSE	canonical	3	26	junction_2	14.7837748900611	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGAGGATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	108682521	108634707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_108638091_108647157_108647301_108653571_108653666_108655950_108656024_108656989_108657217_108682369
tx.18332	chr7	-	4081	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	17	1183	-3	-1183	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATTTTTTCTTAAAC	NA	False	NA	NA	False	NA	NA	NA	108682521	108634701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
tx.18333	chr7	-	1910	5	FSM	ENSMUSG00000048330.15	ENSMUST00000133876.2	3258	5	-13	1361	-2	-1361	multi-exon	FALSE	canonical	3	56	junction_3	4.55521678957215	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGCATCATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	108682531	108645949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
tx.18334	chr7	-	958	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	58	-104	58	1	multi-exon	FALSE	canonical	3	61	junction_1	6.37704215656966	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGACTGCATTGTTCAC	NA	False	NA	NA	False	NA	NA	NA	108774356	108737777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
tx.18335	chr7	-	1737	11	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51226	4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_10	9.45568612000208	24	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCCCTCACGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	108986798	108878425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
tx.18336	chr7	+	514	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	49	595	0	6	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	554	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCATCCTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	109118402	109120979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
tx.18337	chr7	+	1459	4	NIC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	0	-9	intron_retention	FALSE	canonical	3	12965	junction_3	1855.24883027108	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTGTCTACATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	109118405	109121565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_109118856_109119124_109119201_109119674_109119850_109120807
tx.18338	chr7	-	4449	20	FSM	ENSMUSG00000031024.14	ENSMUST00000077909.9	4612	20	165	-2	-35	2	multi-exon	TRUE	canonical	3	89	junction_19	35.017605386157	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGTCTTATTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	109215795	109123124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109215504
tx.18339	chr7	-	4320	21	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	65	junction_20	42.4156810625504	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGAGTCTTATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	109302817	109123125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
tx.1834	chr10	+	4116	2	ISM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	6005	-2367	6005	-1397	3prime_fragment	FALSE	canonical	3	83	junction_1	0	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGTGGAATTCACTAG	NA	False	NA	NA	False	NA	NA	NA	80979791	80986659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_80981052_80983803
tx.18340	chr7	-	3711	18	ISM	ENSMUSG00000031024.14	ENSMUST00000077909.9	4612	20	59632	0	-16688	0	3prime_fragment	FALSE	canonical	3	171	junction_15	24.3838962117146	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	NA	False	NA	NA	NA	109156328	109123126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417
tx.18341	chr7	+	1014	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	11	3	11	-3	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCATTTTATTGCTATT	NA	False	NA	NA	False	NA	NA	NA	109302907	109311393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
tx.18342	chr7	+	1084	5	ISM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	110	3	48	-3	3prime_fragment	FALSE	canonical	3	347	junction_1	28.0624304008046	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCATTTTATTGCTATT	NA	False	NA	NA	False	NA	NA	NA	109303006	109311393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
tx.18343	chr7	-	1683	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	18	2	-15	0	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAATGTTTCTGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	109351468	109335042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
tx.18344	chr7	-	3914	7	FSM	ENSMUSG00000034825.15	ENSMUST00000033331.7	3910	7	0	-4	0	0	multi-exon	FALSE	canonical	2	8	junction_6	3.54338193757822	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTGAGTCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	109380752	109357261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_109360397_109360853_109360949_109361027_109361081_109362690_109362831_109364672_109364756_109365679_109365842_109380506
tx.18345	chr7	-	5261	23	NNC	ENSMUSG00000007279.15	novel	3563	22	NA	NA	-5	1886	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.12083329950695	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTATTTTATGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	109464891	109395996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_109396573_109396779_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
tx.18346	chr7	-	5469	22	FSM	ENSMUSG00000007279.15	ENSMUST00000106729.8	3563	22	-6	-1900	-6	1886	multi-exon	FALSE	canonical	1	3	junction_18	1.71560795568113	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTATTTTATGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	109464892	109395996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
tx.18347	chr7	-	4989	23	FSM	ENSMUSG00000035901.15	ENSMUST00000080437.13	5004	23	15	0	15	0	multi-exon	FALSE	canonical	3	123	junction_12	18.0282148014056	256	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	109559662	109492986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
tx.18348	chr7	-	2939	6	NIC	ENSMUSG00000047554.15	novel	2774	9	NA	NA	1	0	intron_retention	TRUE	canonical	3	346	junction_5	24.5324275195098	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTATCTGTCTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	109585481	109572691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_109574159_109575801_109575941_109577916_109578690_109580195_109580325_109581862_109581981_109585168
tx.18349	chr7	-	2370	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	170	1300	-6	-2	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	350	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTATCTGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	109585488	109572693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
tx.1835	chr10	-	2365	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	187	19	-22	-19	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	728	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTCCGGCATCTGAAC	NA	False	NA	NA	False	NA	NA	NA	81003570	80989118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
tx.18350	chr7	+	4731	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	28	4	-13	-4	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	1247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCCTTTGTGTTGTGTT	7226	False	NA	NA	False	NA	NA	NA	109617508	109655812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
tx.18351	chr7	+	3188	12	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	28403	0	16611	0	3prime_fragment	FALSE	canonical	3	710	junction_2	96.4500470204547	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	109645883	109655816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
tx.18352	chr7	+	3017	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	-7	-7	-7	0	multi-exon	TRUE	canonical	3	81	junction_4	55.3423285861133	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	109660909	109694601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
tx.18353	chr7	+	3012	16	FSM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	-5	-376	-5	0	multi-exon	FALSE	canonical	3	74	junction_4	56.3191698171137	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	109660911	109694601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
tx.18354	chr7	+	3415	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	4	0	4	0	multi-exon	TRUE	canonical	3	352	junction_6	26.6084573021436	727	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAAATCTTCACGGTG	NA	False	NA	NA	False	NA	NA	NA	109721256	109742493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
tx.18355	chr7	+	3963	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	-4	68	-4	-68	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	464	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	109820913	109882645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
tx.18356	chr7	-	7174	41	NIC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	25.4321523863003	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	110214118	109907220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109947093_109947190_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
tx.18357	chr7	-	7083	40	FSM	ENSMUSG00000038371.16	ENSMUST00000164759.8	7090	40	6	1	-2	-1	multi-exon	FALSE	canonical	3	82	junction_32	14.3447273642903	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	110214123	109907220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
tx.18358	chr7	+	3986	15	FSM	ENSMUSG00000005686.18	ENSMUST00000170374.8	3489	15	-17	-480	-17	-6	multi-exon	FALSE	canonical	3	40	junction_1	9.21539306745812	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAACAAATGTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	110367395	110411606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
tx.18359	chr7	+	4145	15	FSM	ENSMUSG00000005686.18	ENSMUST00000213373.2	3337	15	-331	-477	237	-9	multi-exon	FALSE	canonical	3	8	junction_1	15.4927567012485	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATAGAACAAATGTTTCT	NA	False	NA	NA	False	NA	NA	NA	110367786	110411603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_110368140_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
tx.1836	chr10	+	3074	14	FSM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	15	0	15	0	multi-exon	TRUE	canonical	3	5618	junction_10	706.418033369635	10254	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	NA	False	NA	NA	NA	81012479	81018332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
tx.18360	chr7	-	3795	5	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	-12	0	intron_retention	FALSE	canonical	2	4	junction_4	48.6640267548833	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	110443621	110412737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110443545
tx.18361	chr7	-	3992	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	40	0	-15	0	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	110443624	110412737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
tx.18362	chr7	-	3906	6	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	-15	0	intron_retention	FALSE	canonical	3	12	junction_4	41.252393869932	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	110443624	110412737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436369_110436478_110443545
tx.18363	chr7	+	4265	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	35	0	-9	0	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	209	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	534	False	NA	NA	False	NA	NA	NA	110628192	110655584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
tx.18364	chr7	-	3789	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	24	4182	11	0	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	8817	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	NA	False	NA	NA	NA	110682213	110671138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
tx.18365	chr7	-	3675	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	11	0	11	0	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	1838	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	NA	False	NA	NA	NA	110682213	110671138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
tx.18366	chr7	+	7390	28	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-26	0	intron_retention	FALSE	canonical	3	115	junction_12	66.4543739225875	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	NA	False	NA	NA	NA	111622684	111710591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
tx.18367	chr7	+	5562	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-22	0	-22	0	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	452	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	NA	False	NA	NA	NA	111622688	111710591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
tx.18368	chr7	+	5622	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-24	-901	-22	0	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	293	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	NA	False	NA	NA	NA	111622688	111710591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
tx.18369	chr7	-	3186	6	NIC	ENSMUSG00000030772.7	novel	3359	8	NA	NA	631	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	21.3971960779912	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCATGGTATGGGT	NA	False	NA	NA	False	NA	NA	NA	111757633	111715228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111749817_111749956_111757389
tx.1837	chr10	+	1519	9	FSM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	13	198	1	16	multi-exon	FALSE	canonical	3	321	junction_1	26.7675176286483	291	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCCTGTCTCCCACGC	8568	False	NA	NA	False	NA	NA	NA	81018851	81028833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
tx.18370	chr7	-	3386	8	FSM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	-32	5	-32	-5	multi-exon	FALSE	canonical	0	0	junction_7	18.9198092927352	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCATGGTATGGGT	NA	False	NA	NA	False	NA	NA	NA	111758296	111715228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389_111757626_111758172
tx.18371	chr7	-	3272	7	ISM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	629	5	629	-5	3prime_fragment	FALSE	canonical	3	37	junction_5	9.03234926989282	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCATGGTATGGGT	NA	False	NA	NA	False	NA	NA	NA	111757635	111715228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389
tx.18372	chr7	+	4263	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	186	5	-13	-5	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAACTCTTCGCTGTTTCT	3515	False	NA	NA	False	NA	NA	NA	112027098	112190894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
tx.18373	chr7	+	2303	12	FSM	ENSMUSG00000055320.19	ENSMUST00000084705.13	2543	12	-2	242	-2	-242	multi-exon	TRUE	canonical	2	15	junction_1	4.44804720826366	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTCTTTTTAAAAC	NA	False	NA	NA	False	NA	NA	NA	112278522	112498424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
tx.18374	chr7	+	2862	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	46	0	-15	0	multi-exon	FALSE	canonical	3	63	junction_10	14.0300429530047	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTTCCCAATTGATAA	3793	False	NA	NA	False	NA	NA	NA	112806717	112913333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
tx.18375	chr7	+	1686	9	ISM	ENSMUSG00000055116.9	ENSMUST00000211770.2	2464	20	60853	-286	-9944	0	3prime_fragment	FALSE	canonical	3	70	junction_1	14.6287388383278	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTTCCCAATTGATAA	NA	False	NA	NA	False	NA	NA	NA	112894682	112913333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
tx.18376	chr7	-	2453	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	13	7	combination_of_known_splicesites	FALSE	canonical	3	63	junction_7	47.410734836931	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACTTTATGAACACCTT	NA	False	NA	NA	False	NA	NA	NA	112968586	112914842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112964111_112964177_112968078_112968166_112968405
tx.18377	chr7	-	2388	9	FSM	ENSMUSG00000038187.15	ENSMUST00000119278.8	2394	9	13	-7	13	7	multi-exon	FALSE	canonical	3	59	junction_7	50.6814500088543	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACTTTATGAACACCTT	NA	False	NA	NA	False	NA	NA	NA	112968586	112914842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968166_112968405
tx.18378	chr7	-	2607	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	-40	14	13	3	multi-exon	FALSE	canonical	3	112	junction_8	39.4138300600183	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGACCAACTTTATGAACA	NA	False	NA	NA	False	NA	NA	NA	112968586	112914846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
tx.18379	chr7	+	4690	11	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	-3	-8	combination_of_known_splicesites	FALSE	canonical	2	15	junction_8	124.397588401062	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAAGTTTGATGTACTC	NA	False	NA	NA	False	NA	NA	NA	113113064	113170710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113160582_113160713_113165591_113165720_113167301
tx.1838	chr10	+	1846	11	NIC	ENSMUSG00000004933.18	novel	2228	13	NA	NA	21	1	intron_retention	FALSE	canonical	2	6	junction_6	3.13687742827162	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGTCTGATGCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	81093302	81098816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_81093409_81094313_81094374_81095010_81095122_81095216_81095333_81095420_81095641_81095922_81096017_81096741_81096808_81097276_81097377_81097464_81097991_81098281_81098369_81098456
tx.18380	chr7	+	4317	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	19	626	-8	427	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	616	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	NA	NA	NA	113113059	113170092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
tx.18381	chr7	+	4170	3	FSM	ENSMUSG00000030759.17	ENSMUST00000155183.2	775	3	-660	-2735	-660	427	multi-exon	FALSE	canonical	2	280	junction_1	80.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	NA	NA	NA	113159461	113170092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_113160713_113165591_113165720_113167301
tx.18382	chr7	-	2274	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	0	1	0	-1	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	274	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACGCTTGACGGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	113717016	113646017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
tx.18383	chr7	-	3346	22	FSM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	-2	2	-2	-2	multi-exon	FALSE	canonical	3	435	junction_12	34.3731688854697	928	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTATCTGTGGGATTT	NA	False	NA	NA	False	NA	NA	NA	113853948	113814795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
tx.18384	chr7	-	1157	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	42	2	-9	-2	multi-exon	TRUE	canonical	3	2548	junction_6	196.061655709387	1126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	113875311	113863842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
tx.18385	chr7	+	5335	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-77	1315	-77	-1315	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAACTTGCGTTTATATA	NA	False	NA	NA	False	NA	NA	NA	114014438	114137171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
tx.18386	chr7	+	4149	16	NNC	ENSMUSG00000030671.10	novel	719	4	NA	NA	-102	-1315	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	18.5021320092818	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAACTTGCGTTTATATA	NA	False	NA	NA	False	NA	NA	NA	114014413	114137171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_114014487_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
tx.18387	chr7	-	957	5	FSM	ENSMUSG00000030669.14	ENSMUST00000032906.11	994	5	33	4	-12	-4	multi-exon	FALSE	canonical	3	77	junction_2	7.39932429347437	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGGAGTCTTTGCTGT	2067	False	NA	NA	False	NA	NA	NA	114235559	114230716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235446
tx.18388	chr7	-	3324	3	FSM	ENSMUSG00000030669.14	ENSMUST00000205933.2	458	3	-5	-2861	1	-2	multi-exon	FALSE	canonical	3	87	junction_2	4	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGAGTCTTTGCTGTTA	2080	False	NA	NA	False	NA	NA	NA	114235546	114230714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_114233844_114234361_114234457_114235446
tx.18389	chr7	-	2847	4	NIC	ENSMUSG00000030669.14	novel	994	5	NA	NA	8	-7	intron_retention	FALSE	canonical	3	87	junction_3	3.77123616632825	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAAGTGGAGTCTTTGC	2042	False	NA	NA	False	NA	NA	NA	114235584	114230719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_114231141_114231650_114233844_114234361_114234457_114235446
tx.1839	chr10	-	588	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	8	8	-2	-8	multi-exon	FALSE	canonical	3	958	junction_1	11.5	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCACATGTGTGTCAT	3102	False	NA	NA	False	NA	NA	NA	81102760	81100554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81100832_81101484_81101642_81102606
tx.18390	chr7	+	1458	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	20	1	-15	-1	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	1163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTGATGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	115692555	115704444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
tx.18391	chr7	-	5131	27	FSM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	21	-3	0	3	multi-exon	FALSE	canonical	3	186	junction_4	26.6807778245958	423	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGGCTCTTGCTGGC	NA	False	NA	NA	False	NA	NA	NA	115907590	115722724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
tx.18392	chr7	-	5278	28	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	71.9149207738142	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGTGTCCTGGCTCTTGC	NA	False	NA	NA	False	NA	NA	NA	115907589	115722728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115803865_115804018_115907159_115907218_115907306_115907384_115907485
tx.18393	chr7	-	4618	23	FSM	ENSMUSG00000045659.19	ENSMUST00000182487.8	3476	23	0	-1142	0	0	multi-exon	FALSE	canonical	3	231	junction_11	21.5147460482494	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGATTGGCGTGGTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	115907590	115733025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
tx.18394	chr7	-	198	2	Intergenic	novelGene_362	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGGTGCCTTTAATC	NA	False	NA	NA	False	NA	NA	NA	115962483	115935234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_115935259_115962309
tx.18395	chr7	-	8122	34	FSM	ENSMUSG00000030660.10	ENSMUST00000206219.2	5670	34	6	-2458	-4	-4	multi-exon	FALSE	canonical	3	22	junction_32	16.3820323083798	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTGGCTGTCATTTCC	NA	False	NA	NA	False	NA	NA	NA	116042678	115936503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116041825_116041914_116042538
tx.18396	chr7	-	8035	33	FSM	ENSMUSG00000030660.10	ENSMUST00000170430.3	8044	33	-2	11	-2	0	multi-exon	FALSE	canonical	3	47	junction_32	13.7259733261434	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGAACTTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	116042686	115936510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
tx.18397	chr7	-	7541	32	ISM	ENSMUSG00000030660.10	ENSMUST00000170430.3	8044	33	25221	4	25211	-4	3prime_fragment	FALSE	canonical	3	53	junction_14	13.3923425400367	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTGGCTGTCATTTCC	NA	False	NA	NA	False	NA	NA	NA	116017463	115936503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687
tx.18398	chr7	+	1686	14	FSM	ENSMUSG00000030659.15	ENSMUST00000032895.15	1685	14	0	-1	0	1	multi-exon	FALSE	canonical	3	41	junction_2	11.132340009308	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACACGTTTTTATCTTT	NA	False	NA	NA	False	NA	NA	NA	116103603	116139820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
tx.18399	chr7	-	435	4	FSM	ENSMUSG00000008683.17	ENSMUST00000106590.5	637	4	307	-105	9	0	multi-exon	FALSE	canonical	3	8104	junction_2	1380.96640879575	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	117714470	117708286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331
tx.184	chr1	-	771	6	ISM	ENSMUSG00000026110.16	ENSMUST00000042161.15	7030	15	-24	25135	-8	-1559	5prime_fragment	FALSE	canonical	3	167	junction_4	20.3666393889615	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCGACTTGACAAACCTGA	NA	False	NA	NA	False	NA	NA	NA	37575340	37503555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119
tx.1840	chr10	+	1994	11	NIC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	59.7863696840676	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1343	False	NA	NA	False	NA	NA	NA	81104028	81109070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_81104154_81104691_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
tx.18400	chr7	-	481	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	6	4692	6	0	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	1202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	117715405	117708286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
tx.18401	chr7	-	2076	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	87	8	-1	-8	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	2338	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTCACTTTCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	117728798	117718121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
tx.18402	chr7	-	6835	14	ISM	ENSMUSG00000030655.16	ENSMUST00000179331.9	12147	61	60511	-2741	6805	2	3prime_fragment	FALSE	canonical	3	89	junction_9	11.1121235567658	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTAAGCTCTGAATTTA	NA	False	NA	NA	False	NA	NA	NA	117751682	117730528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500
tx.18403	chr7	-	15593	63	FSM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	-39	3	-6	-3	multi-exon	TRUE	canonical	3	32	junction_39	26.3486045060696	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTATCTAAGCTCTGA	NA	False	NA	NA	False	NA	NA	NA	117842899	117730533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
tx.18404	chr7	-	195	2	Intergenic	novelGene_364	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGTGCTTTAGAGAGGCT	NA	False	NA	NA	False	NA	NA	NA	117819883	117781226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_117781373_117819834
tx.18405	chr7	-	864	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	50	0	-5	0	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	247	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6675	False	NA	NA	False	NA	NA	NA	118132529	118124284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
tx.18406	chr7	-	4526	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	31.5472132947851	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTGGGTGCGTGTTG	4147	False	NA	NA	False	NA	NA	NA	118183956	118135063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_118137441_118138637_118138717_118141108_118141248_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
tx.18407	chr7	-	4532	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	12	2	12	-2	multi-exon	FALSE	canonical	3	106	junction_8	12.8571640211466	202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTGTTGGGTGCGTGT	4156	False	NA	NA	False	NA	NA	NA	118183947	118135065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
tx.18408	chr7	-	4005	5	NIC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	-1	-10	intron_retention	FALSE	canonical	3	428	junction_4	45.5137341909011	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGCAAACTGTGTACTG	NA	False	NA	NA	False	NA	NA	NA	118305002	118287777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
tx.18409	chr7	-	1566	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	5	11	5	-11	multi-exon	TRUE	canonical	3	428	junction_5	40.804901666344	408	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGGCAAACTGTGTACT	NA	False	NA	NA	False	NA	NA	NA	118304996	118287778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
tx.1841	chr10	+	2065	11	FSM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	30	11	17	0	multi-exon	FALSE	canonical	3	174	junction_1	25.7441255435099	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1350	False	NA	NA	False	NA	NA	NA	81104035	81109069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
tx.18410	chr7	+	5066	16	FSM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	4	3	4	0	multi-exon	TRUE	canonical	3	57	junction_14	14.3789970288458	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGTTGGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	118311778	118336244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332196_118334490
tx.18411	chr7	+	4980	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_14	17.3487634094403	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGTTGGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	118311778	118336244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
tx.18412	chr7	+	3959	11	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	183	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_10	18.3182968640646	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	118321020	118336247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
tx.18413	chr7	+	3101	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	517	1479	-4	0	multi-exon	TRUE	canonical	3	302	junction_1	75.0223744403406	1043	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCAGTGTCTCGGTGTG	NA	False	NA	NA	False	NA	NA	NA	118339965	118440710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
tx.18414	chr7	-	5011	4	ISM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	2655	-2	2270	2	3prime_fragment	FALSE	canonical	0	0	junction_3	289.540248593448	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	-50	True	NA	NA	NA	118452566	118441442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625
tx.18415	chr7	-	4930	4	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	14	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	275.587050171488	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	NA	False	NA	NA	NA	118454893	118441442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_118445318_118449843_118449913_118451625_118452564_118454845
tx.18416	chr7	-	5069	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	315	-2	1	2	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	810	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	NA	False	NA	NA	NA	118454906	118441442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
tx.18417	chr7	-	5022	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	217	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTCTTTTGAATGTG	NA	False	NA	NA	False	NA	NA	NA	118454906	118441441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
tx.18418	chr7	-	4586	5	FSM	ENSMUSG00000030980.18	ENSMUST00000063607.12	4884	5	318	-20	1	5	multi-exon	FALSE	canonical	3	187	junction_3	184.092877374438	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	NA	False	NA	NA	NA	118454906	118441439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118452111_118452564_118454845
tx.18419	chr7	-	4518	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	2	-2	2	2	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATGCGTGGTAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	118594432	118571267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
tx.1842	chr10	-	3011	21	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	33.8096140173176	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	7814	False	NA	NA	False	NA	NA	NA	81121641	81109040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
tx.18420	chr7	-	753	2	Intergenic	novelGene_365	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGCCTTCTTCCTCTC	NA	False	NA	NA	False	NA	NA	NA	118622950	118610807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_118611350_118622739
tx.18421	chr7	-	2229	2	ISM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	2525	0	2491	0	3prime_fragment	FALSE	canonical	3	902	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	119317496	119314315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_119316293_119317244
tx.18422	chr7	-	2669	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	20	0	-14	0	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	1432	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	119320001	119314315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
tx.18423	chr7	+	2182	2	NNC	ENSMUSG00000100153.3	novel	1437	2	NA	NA	-15	18	intron_retention	FALSE	canonical	3	208	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339133	119341467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_119339946_119340097
tx.18424	chr7	+	1470	2	FSM	ENSMUSG00000100153.3	ENSMUST00000207161.2	1437	2	-15	-18	-15	18	multi-exon	FALSE	canonical	3	469	junction_1	0	170	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339133	119341467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_119340294_119341157
tx.18425	chr7	+	2226	2	NNC	ENSMUSG00000100153.3	novel	1437	2	NA	NA	-12	18	intron_retention	FALSE	canonical	3	37	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339136	119341467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_119339769_119339873
tx.18426	chr7	-	3127	4	ISM	ENSMUSG00000030929.18	ENSMUST00000033224.14	3487	9	6005	6	-25	-2	3prime_fragment	FALSE	canonical	3	53	junction_1	9.0921211313239	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCAGATTTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	119387200	119383055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956
tx.18427	chr7	-	3484	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	76	4	0	-4	multi-exon	FALSE	canonical	3	53	junction_1	8.7571399440685	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCAGATTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	119393205	119383057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
tx.18428	chr7	+	2367	11	ISM	ENSMUSG00000030924.17	ENSMUST00000106520.9	2492	20	67	20723	-42	210	intron_retention	FALSE	canonical	3	15	junction_1	8.75728268357257	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTTTGTAGTATGTATT	NA	False	NA	NA	False	NA	NA	NA	119393299	119427443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_119393726_119398787_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525
tx.18429	chr7	-	5760	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	17	-338	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	52.0917993119412	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAATTTATTCTGAGGT	NA	False	NA	NA	False	NA	NA	NA	119494951	119452356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_119457280_119458602_119459139_119469637_119469768_119494780
tx.1843	chr10	-	3031	21	FSM	ENSMUSG00000034917.9	ENSMUST00000045744.7	3024	21	-4	-3	-4	3	multi-exon	TRUE	canonical	3	41	junction_20	26.4920271025077	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATACAAGACTGAGGACT	7293	False	NA	NA	False	NA	NA	NA	81127105	81109037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81126881
tx.18430	chr7	-	5538	3	NNC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	4	-370	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	47.5	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATTGATATTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	119494964	119452388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_119457280_119458602_119459139_119494853
tx.18431	chr7	-	4320	2	ISM	ENSMUSG00000048787.14	ENSMUST00000142120.2	630	3	1918	-3721	1890	-1476	3prime_fragment	FALSE	canonical	3	117	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCAAAAGATGTGTTTA	136	False	NA	NA	False	NA	NA	NA	119459137	119453494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_119457280_119458602
tx.18432	chr7	-	5607	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	8	370	8	-370	multi-exon	FALSE	canonical	3	85	junction_2	16	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATTGATATTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	119494960	119452388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_119457280_119458602_119459139_119494780
tx.18433	chr7	-	2864	3	FSM	ENSMUSG00000048787.14	ENSMUST00000142120.2	630	3	-20	-2214	-20	27	multi-exon	FALSE	canonical	3	12	junction_2	52.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTATTAAATATTTGGA	NA	False	NA	NA	False	NA	NA	NA	119461075	119455001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_119457280_119458602_119459139_119461025
tx.18434	chr7	+	1086	5	FSM	ENSMUSG00000030922.13	ENSMUST00000054440.11	752	5	-15	-319	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	26.343879744639	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTTGTTTTGTTGA	NA	False	NA	NA	False	NA	NA	NA	119495089	119515975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_119495114_119499333_119499532_119509026_119509186_119513395_119513489_119515363
tx.18435	chr7	+	1461	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	25	-2	-17	2	multi-exon	FALSE	canonical	3	63	junction_3	8.8423695919137	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTTTCTTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	119701600	119720211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
tx.18436	chr7	-	1284	8	FSM	ENSMUSG00000030905.6	ENSMUST00000033198.6	1383	8	94	5	94	-5	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTCCTTTGACAACT	NA	False	NA	NA	False	NA	NA	NA	119801240	119785607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_119785922_119788948_119789034_119789674_119789797_119794547_119794732_119796872_119796975_119798470_119798534_119800299_119800451_119800977
tx.18437	chr7	+	1671	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	36	189	-28	-189	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	873	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAGAGTAATTTTTGA	NA	False	NA	NA	False	NA	NA	NA	120234434	120258558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
tx.18438	chr7	+	4200	4	FSM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-78	-3777	-16	0	multi-exon	FALSE	canonical	3	73	junction_1	54.0514158515349	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	120276824	120333494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_120276936_120277012_120277094_120325342_120325556_120329699
tx.18439	chr7	+	4276	3	FSM	ENSMUSG00000046096.8	ENSMUST00000060175.8	4831	3	-28	583	-15	0	multi-exon	FALSE	canonical	3	80	junction_2	55.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	120276825	120333494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_120277094_120325342_120325556_120329699
tx.1844	chr10	+	4193	17	FSM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	15	0	-2	0	multi-exon	FALSE	canonical	3	97	junction_16	27.8766815636295	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	4990	False	NA	NA	False	NA	NA	NA	81128811	81155806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
tx.18440	chr7	+	827	2	FSM	ENSMUSG00000046096.8	ENSMUST00000208454.2	813	2	-17	3	-15	-3	multi-exon	FALSE	canonical	3	191	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGTGAAGGCAGTCATT	NA	False	NA	NA	False	NA	NA	NA	120276825	120325901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_120277094_120325342
tx.18441	chr7	+	2380	3	NIC	ENSMUSG00000046096.8	novel	4831	3	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	16	junction_2	87.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTTCTATTACTTTTA	NA	False	NA	NA	False	NA	NA	NA	120276830	120333491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_120277094_120325342_120325556_120331587
tx.18442	chr7	+	3117	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	14	3449	14	0	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGCCTTTATACATGC	NA	False	NA	NA	False	NA	NA	NA	120442067	120503224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
tx.18443	chr7	+	3019	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	-8	1183	5	0	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	120516998	120545472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
tx.18444	chr7	+	3418	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	6	0	intron_retention	TRUE	canonical	0	0	junction_21	76.9953616413724	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCAGAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	120516999	120546655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
tx.18445	chr7	+	187	2	Antisense	novelGene_ENSMUSG00000030878.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAAAGGTTAAAATATA	16	False	NA	NA	False	NA	NA	NA	120553083	120560733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_+_120553247_120560709
tx.18446	chr7	-	2522	5	FSM	ENSMUSG00000030878.12	ENSMUST00000033169.9	2525	5	-2	5	-2	-5	multi-exon	FALSE	canonical	3	32	junction_2	6.89202437604511	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGGTCTACGTCTGT	NA	False	NA	NA	False	NA	NA	NA	120581537	120556263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_120558021_120559314_120559480_120559732_120559882_120569548_120569662_120581199
tx.18447	chr7	+	1698	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	125	0	125	0	multi-exon	FALSE	canonical	3	223	junction_4	46.4435140789325	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9552	False	NA	NA	False	NA	NA	NA	120633792	120676058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
tx.18449	chr7	-	10375	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-190	13	-190	-13	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCTTCAAGACATATTT	NA	False	NA	NA	False	NA	NA	NA	121306666	121241256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
tx.1845	chr10	+	4272	18	FSM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	-2	-1719	-2	0	multi-exon	FALSE	canonical	3	84	junction_16	35.5956725335284	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTCTCCGGTGACTTA	4990	False	NA	NA	False	NA	NA	NA	81128811	81155807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
tx.18450	chr7	-	3028	15	ISM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-188	9088	-188	7673	5prime_fragment	FALSE	canonical	3	25	junction_5	9.49032805179106	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTCTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	121306664	121250331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
tx.18451	chr7	-	2888	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	17	-3	0	3	multi-exon	TRUE	canonical	3	174	junction_8	14.1585607937389	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTTTCCTTCTTCTCTG	8941	False	NA	NA	False	NA	NA	NA	121580917	121522058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
tx.18452	chr7	-	2837	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	35	2043	0	0	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	1272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGGTGTTGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	121620410	121587987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
tx.18453	chr7	-	3409	8	FSM	ENSMUSG00000030871.12	ENSMUST00000147397.2	3222	8	-22	-165	-22	165	multi-exon	FALSE	canonical	3	137	junction_2	8.41281820819169	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAGTGCGTCATTACCA	NA	False	NA	NA	False	NA	NA	NA	121666315	121637878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121647798_121654781_121654972_121662151_121662308_121666127
tx.18454	chr7	-	2020	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	190	-164	-3	164	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGTGCGTCATTACC	NA	False	NA	NA	False	NA	NA	NA	121666296	121637879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
tx.18455	chr7	+	4825	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	24	0	-9	0	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	924	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTCTCTTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	121666421	121681417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
tx.18456	chr7	+	2529	6	ISM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	18	4561	-15	1	5prime_fragment	FALSE	canonical	3	624	junction_1	34.3685903115039	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTTGTCCCCATTGTT	NA	False	NA	NA	False	NA	NA	NA	121666415	121676856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330
tx.18457	chr7	+	4540	6	ISM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	488	0	216	0	3prime_fragment	FALSE	canonical	3	672	junction_3	19.7281524730523	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTCTCTTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	121666885	121681417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
tx.18458	chr7	-	3037	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	42	400	7	-400	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGTGTCATAATTTCCA	6400	False	NA	NA	False	NA	NA	NA	121701067	121685025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
tx.18459	chr7	-	630	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	7	779	7	-2	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	538	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTATTTTTCTCAATTA	6400	False	NA	NA	False	NA	NA	NA	121701067	121690057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
tx.1846	chr10	+	2611	9	FSM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	104	0	104	0	multi-exon	FALSE	canonical	3	160	junction_2	15.2786615905975	332	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	5573	False	NA	NA	False	NA	NA	NA	81157040	81162076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
tx.18460	chr7	-	3738	13	FSM	ENSMUSG00000044702.14	ENSMUST00000098068.10	3750	13	10	2	10	1	multi-exon	FALSE	canonical	3	74	junction_9	28.0835806121655	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGCTTGTTCTATT	NA	False	NA	NA	False	NA	NA	NA	121732159	121706486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
tx.18461	chr7	-	3311	12	FSM	ENSMUSG00000044702.14	ENSMUST00000106468.7	3304	12	-8	1	-6	-1	multi-exon	FALSE	canonical	3	17	junction_1	44.3423943183529	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATTGCTTGTCGAATTTT	NA	False	NA	NA	False	NA	NA	NA	121732148	121710795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121710994_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
tx.18462	chr7	+	1520	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	12	0	-1	0	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	False	NA	NA	False	NA	NA	NA	121732275	121748267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
tx.18463	chr7	+	2173	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	30	-4	30	4	multi-exon	FALSE	canonical	3	1108	junction_2	92.3724345606776	1318	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCTCTTTTTGGTCT	NA	False	NA	NA	False	NA	NA	NA	121758691	121769100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
tx.18464	chr7	+	8824	17	FSM	ENSMUSG00000052889.12	ENSMUST00000064989.12	2911	17	-166	-5747	-166	0	multi-exon	TRUE	canonical	0	0	junction_4	2.23257138743647	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTGTGTACATGTCTG	NA	False	NA	NA	False	NA	NA	NA	121888353	122233625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_121888741_121889735_121889768_122024181_122024265_122056437_122056550_122057266_122057396_122116051_122116209_122117267_122117403_122127698_122127796_122143855_122144003_122167356_122167531_122181652_122181745_122183620_122183684_122189267_122189407_122193825_122193907_122194188_122194297_122199912_122200054_122226878
tx.18465	chr7	+	2931	3	FSM	ENSMUSG00000030779.17	ENSMUST00000098062.9	6345	3	-797	4211	-661	1420	multi-exon	FALSE	canonical	3	123	junction_1	1.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTTGTGTGTTCCCTG	6905	False	NA	NA	False	NA	NA	NA	122569125	122579404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_122570351_122575158_122575259_122577798
tx.18466	chr7	+	6826	18	FSM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	-642	0	-642	0	multi-exon	FALSE	canonical	3	62	junction_15	18.9192419579373	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTGCAAATGTATATTA	6924	False	NA	NA	False	NA	NA	NA	122569144	122601780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599806
tx.18467	chr7	+	6728	17	FSM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	-1001	1	-647	-1	multi-exon	TRUE	canonical	3	56	junction_15	18.1597726789186	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTTGCAAATGTATATT	6919	False	NA	NA	False	NA	NA	NA	122569139	122601779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
tx.18468	chr7	+	7113	17	ISM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	-627	2	-627	1	intron_retention	FALSE	canonical	3	62	junction_15	16.5452740608912	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGTTGCAAATGTATAT	6939	False	NA	NA	False	NA	NA	NA	122569159	122601778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747
tx.18469	chr7	+	3404	2	ISM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	27931	1	-1430	-1	3prime_fragment	FALSE	canonical	3	144	junction_1	0	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTTGCAAATGTATATT	NA	False	NA	NA	False	NA	NA	NA	122598071	122601779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_122599503_122599806
tx.1847	chr10	-	1624	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	0	-3	0	0	multi-exon	FALSE	canonical	3	490	junction_7	50.249222630803	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	81186258	81181881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
tx.18470	chr7	+	2577	3	FSM	ENSMUSG00000109814.2	ENSMUST00000211504.2	662	3	-45	-1870	-45	4	multi-exon	FALSE	canonical	2	5	junction_2	0.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTTATGGTTTTTTA	1691	False	NA	NA	False	NA	NA	NA	122630592	122667532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_122630774_122660895_122661022_122665262
tx.18471	chr7	+	6891	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-19	27	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	33.5151686393731	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122723380	122793237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
tx.18472	chr7	+	7465	24	FSM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	-13	731	-9	578	multi-exon	FALSE	canonical	3	73	junction_8	29.037424518788	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTAATTGTCTCTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	122723390	122793788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
tx.18473	chr7	+	4335	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-13	27	combination_of_known_splicesites	FALSE	canonical	3	38	junction_5	32.7131282565666	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122723386	122793237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
tx.18474	chr7	+	5943	19	ISM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	46171	730	-279	579	3prime_fragment	FALSE	canonical	3	73	junction_3	29.1070819942883	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATTGTCTCTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	122769574	122793789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
tx.18475	chr7	-	3354	20	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	48.7393428936662	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	NA	False	NA	NA	NA	122969121	122878496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
tx.18476	chr7	-	3413	21	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	122969137	122878493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
tx.18477	chr7	-	3364	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-28	0	1	0	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	122969137	122878493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
tx.18478	chr7	-	3305	19	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	53.6950982888281	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	NA	False	NA	NA	NA	122969122	122878497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
tx.18479	chr7	+	1306	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	54	9	-20	0	multi-exon	FALSE	canonical	0	0	junction_5	88.7783757454483	139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGCTACATCTGTACA	6878	False	NA	NA	False	NA	NA	NA	122977258	123029572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
tx.1848	chr10	-	1732	9	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-15	0	intron_retention	FALSE	canonical	3	169	junction_8	141.437044298868	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	81186293	81181881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81185323_81185967_81186024_81186240
tx.18480	chr7	+	1580	6	FSM	ENSMUSG00000030762.12	ENSMUST00000033023.10	1487	6	-98	5	-98	1	multi-exon	FALSE	canonical	3	25	junction_2	2.57681974534503	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGTGTCTGTTGACTT	4278	False	NA	NA	False	NA	NA	NA	123061415	123067222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_123061682_123061796_123062042_123063411_123063539_123064331_123064547_123065808_123065944_123066630
tx.18481	chr7	-	3379	5	ISM	ENSMUSG00000030757.14	ENSMUST00000042470.14	7831	7	-141	12907	-141	5923	5prime_fragment	FALSE	canonical	3	12	junction_2	1.87082869338697	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCATAATCTTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	123099813	123087513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
tx.18482	chr7	-	3716	4	NIC	ENSMUSG00000030757.14	novel	7831	7	NA	NA	-118	5923	intron_retention	FALSE	canonical	3	13	junction_2	1.69967317119759	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCATAATCTTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	123099790	123087513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_123089486_123094028_123094587_123097808_123097996_123098791
tx.18483	chr7	+	1739	2	Intergenic	novelGene_366	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGAATTTGGTTGTA	NA	False	NA	NA	False	NA	NA	NA	123451892	123453794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_+_123451923_123452085
tx.18484	chr7	+	2400	8	FSM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	-15	4	-15	-4	multi-exon	FALSE	canonical	3	41	junction_7	4.74664220738176	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAAAGAAACATTTC	NA	False	NA	NA	False	NA	NA	NA	125043832	125061437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_125043965_125051399_125051901_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
tx.18485	chr7	-	931	7	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	5111	6	4914	-6	3prime_fragment	FALSE	canonical	3	915	junction_1	63.0951662173894	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGGGCTTGTGTGAGG	NA	False	NA	NA	False	NA	NA	NA	125085657	125066817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509
tx.18486	chr7	-	961	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	153	6	-44	-6	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	286	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGGGCTTGTGTGAGG	NA	False	NA	NA	False	NA	NA	NA	125090615	125066817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
tx.18487	chr7	-	6904	37	FSM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	57	0	19	0	multi-exon	FALSE	canonical	3	171	junction_34	23.9112782676933	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGTATTGGCCTAATG	NA	False	NA	NA	False	NA	NA	NA	125306895	125240125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
tx.18488	chr7	+	6151	28	FSM	ENSMUSG00000032743.16	ENSMUST00000069660.13	6148	28	-4	1	-4	-1	multi-exon	FALSE	canonical	3	6	junction_1	4.90904934097212	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTGTGGTACACTGGA	NA	False	NA	NA	False	NA	NA	NA	125307082	125473964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_125307121_125327480_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
tx.18489	chr7	+	6089	27	FSM	ENSMUSG00000032743.16	ENSMUST00000124223.8	5874	27	32	-247	3	2	multi-exon	FALSE	canonical	2	4	junction_1	5.03772748616398	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGTACACTGGATGT	NA	False	NA	NA	False	NA	NA	NA	125307091	125473967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_125307121_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
tx.1849	chr10	-	1441	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	22	0	-14	0	multi-exon	FALSE	canonical	3	169	junction_9	133.860992944542	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	81186292	81181881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
tx.18490	chr7	-	4497	24	FSM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	52	3	-27	-2	multi-exon	TRUE	canonical	3	436	junction_21	38.8223134638356	1254	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	NA	NA	NA	125799621	125700889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
tx.18491	chr7	+	4190	4	FSM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	-82	1	-82	-1	multi-exon	FALSE	canonical	3	196	junction_2	13.4412301024373	431	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGAGCTGCAGGGTG	NA	False	NA	NA	False	NA	NA	NA	125871708	125894187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_125872272_125889028_125889262_125890214_125890418_125890996
tx.18492	chr7	-	1218	12	NIC	ENSMUSG00000030742.8	novel	1235	12	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	13.1689592452595	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTCGTTGTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	125968731	125962998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967713_125967973_125968009_125968113_125968142_125968319
tx.18493	chr7	-	1261	12	FSM	ENSMUSG00000030742.8	ENSMUST00000032997.8	1235	12	-26	0	10	0	multi-exon	FALSE	canonical	3	34	junction_9	5.32264769756525	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTCGTTGTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	125968732	125962998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967755_125967973_125968009_125968113_125968142_125968319
tx.18495	chr7	-	2190	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	22	7	-7	0	multi-exon	TRUE	canonical	3	348	junction_9	48.6508899292612	289	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	125976600	125969238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
tx.18496	chr7	-	3388	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	1	-1	1	1	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	228	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	125995908	125982024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
tx.18497	chr7	+	2233	12	NNC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.1880331980083	105	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTTGTGCCTGCAA	NA	False	NA	NA	False	NA	NA	NA	126028238	126045075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043490_126043694_126043751_126043991_126044109_126044468
tx.18498	chr7	-	4481	10	ISM	ENSMUSG00000030733.11	ENSMUST00000205440.2	3089	11	-13	1	0	-1	intron_retention	FALSE	canonical	3	19	junction_9	85.0607625955313	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGGCTGATATTT	8204	False	NA	NA	False	NA	NA	NA	126074275	126066166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650
tx.18499	chr7	-	2971	10	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_2	41.0918873973506	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8198	False	NA	NA	False	NA	NA	NA	126074281	126066165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
tx.185	chr1	-	4356	10	FSM	ENSMUSG00000026090.17	ENSMUST00000162875.8	4634	10	278	0	-12	0	multi-exon	FALSE	canonical	1	1	junction_1	2.83278861866266	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTCTGTGCGTCAAT	NA	False	NA	NA	False	NA	NA	NA	37758888	37650757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_37651478_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37758650
tx.1850	chr10	+	3927	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	42	2	-19	-2	multi-exon	FALSE	canonical	3	201	junction_9	22.6077666104176	455	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	864	False	NA	NA	False	NA	NA	NA	81193366	81202057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
tx.18500	chr7	-	4835	9	ISM	ENSMUSG00000030733.11	ENSMUST00000205440.2	3089	11	16	2	16	0	intron_retention	FALSE	canonical	3	197	junction_2	37.3528362376942	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8233	False	NA	NA	False	NA	NA	NA	126074246	126066167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
tx.18501	chr7	-	3335	10	FSM	ENSMUSG00000030733.11	ENSMUST00000205340.2	3366	10	33	-2	6	-1	multi-exon	FALSE	canonical	3	29	junction_9	82.2103595046059	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGGCTGATATTT	8210	False	NA	NA	False	NA	NA	NA	126074269	126066166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
tx.18502	chr7	-	3018	10	NIC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	75.3988571154828	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGGCTGATATTT	8203	False	NA	NA	False	NA	NA	NA	126074276	126066166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
tx.18503	chr7	-	4755	9	ISM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	164	-2	111	0	intron_retention	FALSE	canonical	3	53	junction_2	78.2606821782177	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8368	False	NA	NA	False	NA	NA	NA	126074111	126066165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
tx.18504	chr7	+	1687	10	FSM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	-8	0	-8	0	multi-exon	FALSE	canonical	3	611	junction_6	33.4490583749803	372	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTTGTCTTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	126086524	126089899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
tx.18505	chr7	-	4008	22	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	1	-3	intron_retention	FALSE	canonical	3	238	junction_21	181.885750689423	77	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	6929	False	NA	NA	False	NA	NA	NA	126101585	126090882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
tx.18506	chr7	-	4440	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-13	3	intron_retention	FALSE	canonical	3	324	junction_21	166.887513543916	207	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	9401	False	NA	NA	False	NA	NA	NA	126102622	126090883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
tx.18507	chr7	-	2872	5	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	16264	456	16057	-456	3prime_fragment	FALSE	canonical	3	2679	junction_1	132.01799119817	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	126149319	126146082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934
tx.18508	chr7	-	2915	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	12	456	12	-456	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	4578	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	126165571	126146082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
tx.18509	chr7	-	1616	14	FSM	ENSMUSG00000030720.17	ENSMUST00000098036.9	1571	14	-45	0	-9	0	multi-exon	FALSE	canonical	3	16	junction_11	40.0146422904558	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	126182407	126171257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180817_126180915_126181935_126182015_126182171
tx.1851	chr10	+	4427	9	NIC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	6	-2	intron_retention	FALSE	canonical	3	201	junction_8	23.7404586097236	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	889	False	NA	NA	False	NA	NA	NA	81193391	81202057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81199518_81199603
tx.18510	chr7	-	1689	15	FSM	ENSMUSG00000030720.17	ENSMUST00000032962.11	2386	15	11	686	-10	0	multi-exon	FALSE	canonical	3	116	junction_11	19.7815880173912	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	126182408	126171257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
tx.18511	chr7	-	645	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	185	-1	-16	1	multi-exon	FALSE	canonical	3	3716	junction_2	16	828	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCGTGTGTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	126224663	126222419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126222752_126224061_126224206_126224494
tx.18512	chr7	-	939	2	FSM	ENSMUSG00000030717.10	ENSMUST00000131174.2	2449	2	1514	-4	-21	1	multi-exon	FALSE	canonical	3	3748	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCGTGTGTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	126224668	126222419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126222752_126224061
tx.18513	chr7	+	1159	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	7	146	4	0	multi-exon	FALSE	canonical	3	419	junction_3	31.8433666561813	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	118	False	NA	NA	False	NA	NA	NA	126248487	126271951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
tx.18514	chr7	+	1409	9	ISM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	8	146	5	0	intron_retention	FALSE	canonical	3	419	junction_3	30.3840007240653	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	119	False	NA	NA	False	NA	NA	NA	126248488	126271951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327
tx.18515	chr7	-	2303	4	NIC	ENSMUSG00000059772.13	novel	2062	5	NA	NA	-19	12	intron_retention	FALSE	canonical	3	82	junction_2	7.93025150224688	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGCCGGGCGTGGTGGCG	5007	False	NA	NA	False	NA	NA	NA	126294936	126289837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_126290828_126290910_126291832_126291924_126291977_126294596
tx.18516	chr7	-	1888	5	FSM	ENSMUSG00000059772.13	ENSMUST00000142337.7	1390	5	-48	-450	12	10	multi-exon	FALSE	canonical	3	27	junction_4	31.8276609256791	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTAGCCGGGCGTGGTGG	4999	False	NA	NA	False	NA	NA	NA	126294944	126289839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126294596
tx.18517	chr7	-	1946	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	1	1205	1	5	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTCTAGCCGGGCGT	4988	False	NA	NA	False	NA	NA	NA	126294955	126289844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
tx.18518	chr7	+	381	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	520	365	-10	0	multi-exon	FALSE	canonical	3	2284	junction_2	148	358	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1131	False	NA	NA	False	NA	NA	NA	126295127	126295865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126295272_126295354_126295453_126295726
tx.18519	chr7	+	1781	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	17	2	17	-2	multi-exon	FALSE	canonical	3	189	junction_5	18.155147341732	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGCCTCTGTCTGTGT	5233	False	NA	NA	False	NA	NA	NA	126358789	126364989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
tx.1852	chr10	-	2375	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	30	652	-23	224	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	901	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCGGTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	81214320	81202707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
tx.18520	chr7	+	962	5	FSM	ENSMUSG00000042675.16	ENSMUST00000038614.12	973	5	10	1	-10	0	multi-exon	FALSE	canonical	3	187	junction_2	12.73528562695	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCTGGCTCACATGGAA	8231	False	NA	NA	False	NA	NA	NA	126376136	126379685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198
tx.18521	chr7	-	1420	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	-19	-1	-19	-1	multi-exon	FALSE	canonical	3	2424	junction_1	142.291307979548	328	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGGTTCTGTCAGGTTT	5207	False	NA	NA	False	NA	NA	NA	126391531	126385038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
tx.18522	chr7	-	1372	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	-13	0	-13	0	multi-exon	FALSE	canonical	3	1828	junction_8	282.244574792856	1015	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	5057	False	NA	NA	False	NA	NA	NA	126391681	126385037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
tx.18523	chr7	-	1594	10	FSM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	-43	-2	-14	0	multi-exon	FALSE	canonical	3	862	junction_9	8041.23258932084	630	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	126398356	126394405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
tx.18524	chr7	-	1441	9	FSM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	70	0	-14	0	multi-exon	FALSE	canonical	3	19253	junction_4	564.678448322583	10941	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	126398356	126394405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
tx.18525	chr7	+	2433	11	FSM	ENSMUSG00000052301.15	ENSMUST00000064110.14	2538	11	105	0	20	0	multi-exon	FALSE	canonical	1	1	junction_1	8.4829240241794	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTTGAGTTTGCTGGC	776	False	NA	NA	False	NA	NA	NA	126446829	126451877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126447205_126447586_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
tx.18526	chr7	-	1995	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	-22	0	0	0	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	244	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9172	False	NA	NA	False	NA	NA	NA	126461032	126450756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
tx.18527	chr7	-	2090	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	206	junction_2	316.419574202949	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACATGTTTTGTGCTTGG	9168	False	NA	NA	False	NA	NA	NA	126461036	126450757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
tx.18528	chr7	-	2253	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	4	1	intron_retention	FALSE	canonical	3	76	junction_7	292.908775936141	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTTGTGCTTGGAT	9921	False	NA	NA	False	NA	NA	NA	126461545	126450755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
tx.18529	chr7	+	2527	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	-9	248	-9	211	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCCCAAACCGTCATGC	1467	False	NA	NA	False	NA	NA	NA	126461134	126464301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
tx.1853	chr10	+	1437	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	7	0	7	0	multi-exon	FALSE	canonical	3	742	junction_3	32.2286751201473	561	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	81220268	81224186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
tx.18530	chr7	+	1806	4	ISM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	1377	5	-494	-5	3prime_fragment	FALSE	canonical	3	257	junction_1	7.34846922834953	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACACACACACTCTCAGGC	2853	False	NA	NA	False	NA	NA	NA	126462520	126464544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_126463423_126463491_126463658_126463734_126463834_126463905
tx.18531	chr7	-	4976	16	FSM	ENSMUSG00000059981.13	ENSMUST00000117394.2	4985	16	11	-2	11	2	multi-exon	TRUE	canonical	3	97	junction_14	9.03228776236797	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCCCAGGCTGCCTC	8444	False	NA	NA	False	NA	NA	NA	126483864	126468672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
tx.18532	chr7	+	3008	5	NIC	ENSMUSG00000030685.6	novel	1676	6	NA	NA	-10	-12	intron_retention	FALSE	canonical	3	174	junction_1	5.53962995154008	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAGGTCTGCTGCTGA	NA	False	NA	NA	False	NA	NA	NA	126528040	126544791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
tx.18533	chr7	+	1675	6	FSM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	-2	3	-2	-3	multi-exon	FALSE	canonical	3	174	junction_2	8.49470423263812	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTGACTCTCGGGT	NA	False	NA	NA	False	NA	NA	NA	126528048	126544800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
tx.18534	chr7	+	1873	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	438	-337	-26	0	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	243	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	NA	False	NA	NA	NA	126575523	126579671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
tx.18535	chr7	-	2795	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	38	4	-33	-4	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTTCTTTTTCCCTC	NA	False	NA	NA	False	NA	NA	NA	126613755	126586035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
tx.18536	chr7	-	1372	3	FSM	ENSMUSG00000107068.2	ENSMUST00000202798.2	1412	3	26	14	26	0	multi-exon	FALSE	canonical	3	276	junction_2	10	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCGTGGTGGCGCACG	9456	False	NA	NA	False	NA	NA	NA	126616498	126614236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126614642_126615371_126615455_126615614
tx.18537	chr7	-	2496	5	ISM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	226	1	152	-1	intron_retention	FALSE	canonical	0	0	junction_1	321.496014749794	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGAGTTCCTAAGTTA	482	False	NA	NA	False	NA	NA	NA	126625472	126621302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475
tx.18538	chr7	-	2460	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	193	-1	intron_retention	FALSE	canonical	3	387	junction_1	181.38770630889	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGAGTTCCTAAGTTA	523	False	NA	NA	False	NA	NA	NA	126625431	126621302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475
tx.18539	chr7	-	2884	2	ISM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	162	-2	162	-2	intron_retention	FALSE	canonical	3	463	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGAGTTCCTAAGTT	492	False	NA	NA	False	NA	NA	NA	126625462	126621303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126622341_126623615
tx.1854	chr10	-	5321	5	ISM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	19503	-2883	-29	-69	3prime_fragment	FALSE	canonical	3	21	junction_3	6.13901457890434	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81243504	81232088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388
tx.18540	chr7	-	2926	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-226	-1	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_1	162.349006772447	298	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGAGTTCCTAAGTTA	-16	False	NA	NA	False	NA	NA	NA	126625970	126621302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
tx.18541	chr7	-	2222	4	ISM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	201	-3	201	-1	intron_retention	FALSE	canonical	3	463	junction_1	152.057737572133	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGAGTTCCTAAGTTA	531	False	NA	NA	False	NA	NA	NA	126625423	126621302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475
tx.18542	chr7	-	3141	4	NNC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	-7	0	intron_retention	FALSE	canonical	3	387	junction_1	176.98775852207	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	203	False	NA	NA	False	NA	NA	NA	126625751	126621305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047
tx.18543	chr7	-	2922	6	FSM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	-274	2	224	-2	multi-exon	FALSE	canonical	0	0	junction_1	289.408085581588	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGAGTTCCTAAGTT	NA	False	NA	NA	False	NA	NA	NA	126625972	126621303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
tx.18544	chr7	-	2690	5	FSM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	-341	-2	-221	-2	multi-exon	FALSE	canonical	3	463	junction_1	136.928813622261	330	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGAGTTCCTAAGTT	-11	True	NA	NA	False	NA	NA	NA	126625965	126621303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
tx.18545	chr7	-	2209	13	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-30	0	intron_retention	FALSE	canonical	3	712	junction_7	45.9422191453569	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAGCCTGGTTTTTGA	7957	False	NA	NA	False	NA	NA	NA	126641611	126626902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
tx.18546	chr7	-	2091	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	25	-1	25	-1	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	747	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGCCTGGTTTTTGAG	7950	False	NA	NA	False	NA	NA	NA	126641618	126626901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
tx.18547	chr7	+	1880	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	52	0	-13	0	multi-exon	FALSE	canonical	3	90	junction_1	0	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTGTATGACCTCTG	NA	False	NA	NA	False	NA	NA	NA	126690582	126693158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126690645_126691340
tx.18548	chr7	-	1714	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	182	154	-3	-154	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	126721216	126706439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
tx.18549	chr7	-	2435	3	ISM	ENSMUSG00000042502.11	ENSMUST00000205525.2	3072	6	1325	2	820	0	3prime_fragment	FALSE	canonical	3	601	junction_2	17	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	6834	False	NA	NA	False	NA	NA	NA	126793796	126791196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126793103_126793186_126793294_126793374
tx.1855	chr10	-	6278	10	FSM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	-21	-2909	-7	-43	multi-exon	FALSE	canonical	3	18	junction_9	5.66557723732532	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAATGTATAAAAAT	3891	False	NA	NA	False	NA	NA	NA	81263028	81232062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
tx.18550	chr7	-	3323	6	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	0	30	0	-1	intron_retention	FALSE	canonical	3	578	junction_3	18.2274518241031	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5520	False	NA	NA	False	NA	NA	NA	126795110	126791197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532
tx.18551	chr7	-	2971	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	-53	366	-3	-1	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	338	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5405	False	NA	NA	False	NA	NA	NA	126795225	126791197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
tx.18552	chr7	-	2999	7	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	200.670058110876	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5520	False	NA	NA	False	NA	NA	NA	126795110	126791196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794958
tx.18553	chr7	-	2908	7	NNC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	218.838156839453	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5462	False	NA	NA	False	NA	NA	NA	126795168	126791197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_126793103_126793186_126793288_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
tx.18554	chr7	-	3630	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-123	107	-123	-107	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	880	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATGTACGTCTCTGTTT	1419	False	NA	NA	False	NA	NA	NA	126807763	126796737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
tx.18555	chr7	+	751	6	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1102	10	31	0	3prime_fragment	FALSE	canonical	3	600	junction_1	477.333007448678	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4062	False	NA	NA	False	NA	NA	NA	126811881	126813460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
tx.18556	chr7	+	558	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1506	10	0	0	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	118	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4466	False	NA	NA	False	NA	NA	NA	126812285	126813460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
tx.18557	chr7	-	1462	11	FSM	ENSMUSG00000000486.14	ENSMUST00000106314.8	1486	11	43	-19	16	4	multi-exon	FALSE	canonical	3	221	junction_10	48.9043965303734	132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCGGAGTCTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	126817627	126813614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
tx.18558	chr7	+	3197	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	8	137	8	-1	multi-exon	FALSE	canonical	3	192	junction_1	0	298	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGGTTATGTGT	8116	False	NA	NA	False	NA	NA	NA	126832240	126837214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126832659_126834435
tx.18559	chr7	+	3205	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	-163	1	31	-1	multi-exon	FALSE	canonical	3	35	junction_1	0	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGGTTATGTGT	8139	False	NA	NA	False	NA	NA	NA	126832263	126837214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126832690_126834435
tx.1856	chr10	-	2885	14	FSM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	-43	-1	23	1	multi-exon	FALSE	canonical	3	153	junction_4	76.7224306246012	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCAGGTGTCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	81332203	81322289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
tx.18560	chr7	+	1393	3	NNC	ENSMUSG00000054716.5	novel	1484	3	NA	NA	262	158	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	61.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTGTTTTGCAGTC	NA	False	NA	NA	False	NA	NA	NA	126843707	126854133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_126843781_126844143_126844307_126852976
tx.18561	chr7	+	1224	3	FSM	ENSMUSG00000054716.5	ENSMUST00000052509.6	1484	3	259	1	259	-1	multi-exon	FALSE	canonical	3	88	junction_1	20	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGATGCCTGTAAGTG	NA	False	NA	NA	False	NA	NA	NA	126843704	126853974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126843781_126844156_126844307_126852976
tx.18562	chr7	-	638	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	38	0	38	0	multi-exon	FALSE	canonical	3	3852	junction_1	65	430	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCGATTTTTCTTGAGT	2528	False	NA	NA	False	NA	NA	NA	126859843	126856130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126856509_126858529_126858641_126859694
tx.18563	chr7	-	2536	2	FSM	ENSMUSG00000047371.8	ENSMUST00000060783.7	2356	2	-179	-1	-13	1	multi-exon	FALSE	canonical	3	6	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCGTCCTTAAGATGTG	5142	False	NA	NA	False	NA	NA	NA	126944774	126941965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126944048_126944320
tx.18564	chr7	-	2682	3	FSM	ENSMUSG00000054381.6	ENSMUST00000067425.6	2684	3	2	0	2	0	multi-exon	FALSE	canonical	3	22	junction_2	4	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGATTTCTGCTCCTC	917	False	NA	NA	False	NA	NA	NA	126975220	126971708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126973871_126974560_126974675_126974814
tx.18565	chr7	-	1064	2	NNC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	1	True	NA	NA	False	NA	NA	NA	127021209	127018138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_127018814_127020820
tx.18566	chr7	-	1023	3	FSM	ENSMUSG00000045251.14	ENSMUST00000106300.2	1015	3	-8	0	-3	0	multi-exon	FALSE	canonical	3	34	junction_1	2.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	-4	True	NA	NA	False	NA	NA	NA	127021214	127018138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127018814_127020576_127020691_127020980
tx.18567	chr7	-	1289	4	NNC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.553639765383	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6900	False	NA	NA	False	NA	NA	NA	127021224	127018138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_127018814_127019181_127019278_127020576_127020691_127020820
tx.18568	chr7	-	3605	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	9	7	9	-7	multi-exon	FALSE	canonical	3	47	junction_1	4.5	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAAGAATTCTGCTCCT	4366	False	NA	NA	False	NA	NA	NA	127048321	127041314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127044310_127047534_127047649_127047825
tx.18569	chr7	+	4873	2	FSM	ENSMUSG00000086502.2	ENSMUST00000144796.2	1778	2	16	-3111	16	3111	multi-exon	FALSE	canonical	3	8	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAATAAATAAAT	919	False	NA	NA	False	NA	NA	NA	127047827	127062643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127048744_127058686
tx.1857	chr10	-	2884	14	FSM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	27	207	-23	1	multi-exon	TRUE	canonical	3	251	junction_4	53.9264236863306	447	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCAGGTGTCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	81332199	81322289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
tx.18570	chr7	+	2419	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	-16	-1	-16	0	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTCCTTTGTGCC	NA	False	NA	NA	False	NA	NA	NA	127070645	127075931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
tx.18571	chr7	+	5177	18	FSM	ENSMUSG00000042423.10	ENSMUST00000205432.3	4166	18	-1014	3	-1014	1	multi-exon	TRUE	canonical	3	16	junction_6	6.52702659137892	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCCCTACCCTCCGGCT	NA	False	NA	NA	False	NA	NA	NA	127077356	127090675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
tx.18572	chr7	+	1824	4	ISM	ENSMUSG00000053877.13	ENSMUST00000189136.7	1960	6	5	2101	5	767	5prime_fragment	FALSE	canonical	3	58	junction_2	2.05480466765633	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTCTTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	127111178	127119908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752
tx.18573	chr7	+	1502	9	NIC	ENSMUSG00000030815.12	novel	1722	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	33.5016324229134	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	127172522	127182477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
tx.18574	chr7	+	1614	10	FSM	ENSMUSG00000030815.12	ENSMUST00000033086.8	1570	10	-46	2	18	0	multi-exon	FALSE	canonical	3	46	junction_3	31.2018517968975	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	127172529	127182477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
tx.18575	chr7	+	2001	3	FSM	ENSMUSG00000030815.12	ENSMUST00000151908.8	1918	3	-52	-31	12	31	multi-exon	FALSE	canonical	3	119	junction_1	14	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTCCATCCAAAATCC	NA	False	NA	NA	False	NA	NA	NA	127172523	127178489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127172629_127173025_127173139_127176706
tx.18576	chr7	-	1423	9	FSM	ENSMUSG00000057176.5	ENSMUST00000072155.5	2536	9	410	703	-16	274	multi-exon	FALSE	canonical	3	15	junction_4	3.80788655293195	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGTCCTCCTGG	8696	False	NA	NA	False	NA	NA	NA	127187357	127182257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127184434_127184625_127184697_127185446_127185617_127185994_127186061_127186735_127186768_127187048
tx.18577	chr7	+	4191	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-26	4	intron_retention	FALSE	canonical	3	259	junction_5	49.6009072497671	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTCCATTTGGTCTAAC	NA	False	NA	NA	False	NA	NA	NA	127187912	127202770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
tx.18578	chr7	+	4081	20	FSM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	-3	1201	-3	4	multi-exon	FALSE	canonical	3	259	junction_5	49.1177002358039	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTCCATTTGGTCTAAC	NA	False	NA	NA	False	NA	NA	NA	127187935	127202770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
tx.18579	chr7	-	5794	3	FSM	ENSMUSG00000045639.15	ENSMUST00000084564.10	5829	3	31	4	17	-4	multi-exon	FALSE	canonical	2	2	junction_1	0.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTTGTTTTTACTTCTT	4433	False	NA	NA	False	NA	NA	NA	127214413	127206206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127211735_127211838_127211946_127214254
tx.1858	chr10	-	3046	3	NNC	ENSMUSG00000034792.9	novel	1046	2	NA	NA	0	2038	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	38	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTAAGCACCTGTTATG	6420	False	NA	NA	False	NA	NA	NA	81344007	81336101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_81336729_81336766_81338940_81343761
tx.18580	chr7	-	5302	6	FSM	ENSMUSG00000030814.18	ENSMUST00000205977.2	891	6	-155	-4256	-9	-1084	multi-exon	FALSE	canonical	3	31	junction_1	191.890176924198	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATACGTTTTCTGAGAGT	NA	False	NA	NA	False	NA	NA	NA	127307966	127261711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
tx.18581	chr7	-	992	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	140	0	-8	0	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	False	NA	NA	False	NA	NA	NA	127307965	127304149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
tx.18582	chr7	+	1372	3	FSM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	-20	0	-20	0	multi-exon	FALSE	canonical	3	6	junction_1	5.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTCCATGTGGGGAGAG	NA	False	NA	NA	False	NA	NA	NA	127311887	127317364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127311952_127313096_127313216_127316175
tx.18583	chr7	+	3138	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	-232	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	34.5797628678972	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCAGTTTGGCTCTTCC	296	False	NA	NA	False	NA	NA	NA	127344709	127368101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_127344800_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
tx.18584	chr7	+	4232	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-274	-548	-274	0	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGGCCGCTGACTTTT	1259	False	NA	NA	False	NA	NA	NA	127345672	127368648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
tx.18585	chr7	+	4104	11	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-270	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	29.982661656364	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGCTGACTTTTTGTGT	1263	False	NA	NA	False	NA	NA	NA	127345676	127368653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
tx.18586	chr7	+	2738	5	ISM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	3787	0	3787	0	3prime_fragment	FALSE	canonical	3	84	junction_3	16.7537309277665	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	6819	False	NA	NA	False	NA	NA	NA	127351232	127368655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
tx.18587	chr7	+	1844	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	10	142	10	-142	multi-exon	FALSE	canonical	3	68	junction_1	0	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCTATGGCTATGAATG	NA	False	NA	NA	False	NA	NA	NA	127368996	127374180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127369389_127372728
tx.18588	chr7	+	5965	19	FSM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	-31	-7	-31	0	multi-exon	TRUE	canonical	3	14	junction_7	11.9666460332021	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	NA	False	NA	NA	NA	127376529	127399294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127376686_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
tx.18589	chr7	+	3751	12	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	8777	-7	7589	0	3prime_fragment	FALSE	canonical	3	26	junction_5	11.9094378852993	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	NA	False	NA	NA	NA	127385337	127399294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
tx.1859	chr10	-	1071	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	-32	7	-32	0	multi-exon	FALSE	canonical	3	76	junction_1	0	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAGGGAACTGAGGAAG	6388	False	NA	NA	False	NA	NA	NA	81344039	81338146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81338940_81343761
tx.18590	chr7	+	2278	6	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	18391	-7	17203	0	3prime_fragment	FALSE	canonical	3	45	junction_1	4.73286382647969	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	NA	False	NA	NA	NA	127394951	127399294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
tx.18591	chr7	+	1826	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	1	1	1	-1	multi-exon	TRUE	canonical	3	65	junction_6	10.2794292967395	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACCTTTTACCC	1885	False	NA	NA	False	NA	NA	NA	127399776	127402973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
tx.18592	chr7	+	2214	6	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	1	0	1	0	intron_retention	FALSE	canonical	3	82	junction_2	5.54977477020464	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1885	False	NA	NA	False	NA	NA	NA	127399776	127402974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407
tx.18593	chr7	+	1774	7	NIC	ENSMUSG00000042289.12	novel	1828	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	28.5389597256491	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACCTTTTACCC	1885	False	NA	NA	False	NA	NA	NA	127399776	127402973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127399887_127400298_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
tx.18594	chr7	+	1499	10	NIC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	20	-7	intron_retention	FALSE	canonical	3	172	junction_3	25.7681974534502	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGCCAGCTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	127440955	127448184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447840_127447922
tx.18595	chr7	+	1861	9	ISM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	-262	10	-262	9	intron_retention	FALSE	canonical	3	172	junction_3	23.6207006669997	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTTGGAGCCAGCTGTG	NA	False	NA	NA	False	NA	NA	NA	127440673	127448181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559
tx.18596	chr7	+	1429	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	20	7	20	-7	multi-exon	FALSE	canonical	3	172	junction_3	24.7872951327893	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGCCAGCTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	127440955	127448184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
tx.18597	chr7	+	1533	10	FSM	ENSMUSG00000030805.15	ENSMUST00000121705.8	1316	10	-205	-12	-1	-7	multi-exon	FALSE	canonical	3	172	junction_3	22.9965107390847	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGCCAGCTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	127440934	127448184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740
tx.18598	chr7	-	3125	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	38	2605	-10	65	multi-exon	FALSE	canonical	3	42	junction_2	4	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCTATGTGGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	127475962	127464823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127466536_127466927_127467597_127475218
tx.18599	chr7	+	7832	3	FSM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	-1523	1	-43	-1	multi-exon	FALSE	canonical	3	99	junction_1	27	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTGGTGTGGTTATAT	140	False	NA	NA	False	NA	NA	NA	127475349	127485167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127477280_127477741_127483091_127484614
tx.186	chr1	-	4595	10	NIC	ENSMUSG00000026090.17	novel	4634	10	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	2.62466929133727	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTCTGTGCGTCAAT	NA	False	NA	NA	False	NA	NA	NA	37759124	37650757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_37651481_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37758650
tx.1860	chr10	-	3378	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	31	5	31	-5	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	661	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCTTTGTGATTA	4254	False	NA	NA	False	NA	NA	NA	81380993	81364562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
tx.18600	chr7	+	6200	3	NIC	ENSMUSG00000049739.11	novel	2241	3	NA	NA	116	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	73	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTACTGGTGTGGTTA	874	False	NA	NA	False	NA	NA	NA	127476083	127485164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127476385_127477741_127483091_127484614
tx.18601	chr7	+	6416	4	NIC	ENSMUSG00000049739.11	novel	6310	3	NA	NA	106	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	56.7802782663136	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTACTGGTGTGGTTAT	864	False	NA	NA	False	NA	NA	NA	127476073	127485165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127476385_127477074_127477280_127477741_127483091_127484614
tx.18602	chr7	+	5022	2	ISM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	1748	2	138	-2	3prime_fragment	FALSE	canonical	3	153	junction_1	0	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACTGGTGTGGTTATA	62	False	NA	NA	False	NA	NA	NA	127478620	127485166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_127483091_127484614
tx.18603	chr7	-	751	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	262	junction_2	18.5	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGCATATGTCTGCC	NA	False	NA	NA	False	NA	NA	NA	127494792	127492234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127492664_127493676_127493787_127494580
tx.18604	chr7	+	1799	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	5	1601	5	12	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	624	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGGGAGGGCAGGCG	NA	False	NA	NA	False	NA	NA	NA	127503258	127507792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
tx.18605	chr7	+	1515	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	1	63	1	-63	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGAGATGCCAAAGGGTG	NA	False	NA	NA	False	NA	NA	NA	127511688	127524946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
tx.18606	chr7	-	1049	5	FSM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	-34	1	1	-1	multi-exon	FALSE	canonical	3	15	junction_3	32.1820990614348	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGGCTTTGTGGCATC	NA	False	NA	NA	False	NA	NA	NA	127534685	127531810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534618
tx.18607	chr7	-	2547	3	ISM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	-35	0	0	0	intron_retention	FALSE	canonical	3	62	junction_2	22	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	NA	NA	NA	127534686	127531809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_127532287_127532542_127532665_127532738
tx.18608	chr7	-	1297	6	FSM	ENSMUSG00000070371.12	ENSMUST00000156152.3	1132	6	-6	-159	-6	-2	multi-exon	TRUE	canonical	3	17	junction_5	34.92506263416	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGTGGCTTTGTGGCAT	NA	False	NA	NA	False	NA	NA	NA	127534628	127531811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533310_127533453_127533561_127533800_127534574
tx.18609	chr7	-	889	4	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	36.3409777890836	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGGCTTTGTGGCATC	NA	False	NA	NA	False	NA	NA	NA	127534671	127531810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_127532287_127532542_127532665_127533561_127533800_127534618
tx.1861	chr10	-	3004	6	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	9932	5	-125	-5	3prime_fragment	FALSE	canonical	3	379	junction_1	22.9399215343035	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCTTTGTGATTA	7744	False	NA	NA	False	NA	NA	NA	81371092	81364562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913
tx.18610	chr7	+	1833	15	FSM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	-2	0	-2	0	multi-exon	FALSE	canonical	3	245	junction_3	273.376618440941	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1181	False	NA	NA	False	NA	NA	NA	127566659	127581204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
tx.18611	chr7	+	1835	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	32	3669	-1	0	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	599	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1182	False	NA	NA	False	NA	NA	NA	127566660	127581204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
tx.18612	chr7	+	4205	8	ISM	ENSMUSG00000030795.19	ENSMUST00000128851.8	4909	13	5173	-3	789	0	3prime_fragment	FALSE	canonical	3	1068	junction_1	116.906381523065	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	6357	False	NA	NA	False	NA	NA	NA	127571835	127581204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
tx.18613	chr7	-	747	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	128	2925	128	-993	multi-exon	FALSE	canonical	3	1219	junction_2	45	355	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGGATGTTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	127592911	127591804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127592138_127592286_127592344_127592554
tx.18614	chr7	-	558	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	-57	179	-57	-179	multi-exon	FALSE	canonical	3	110	junction_1	3.5	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTCTGGCTCTTTGG	5326	False	NA	NA	False	NA	NA	NA	127805616	127804785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127804985_127805071_127805209_127805394
tx.18615	chr7	+	3088	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	746	0	746	0	multi-exon	FALSE	canonical	3	88	junction_1	5.30659966456864	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	NA	False	NA	NA	NA	127837274	127844272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
tx.18616	chr7	-	2577	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	50	0	-11	0	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	240	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTTCATACTGCAGGC	1156	False	NA	NA	False	NA	NA	NA	127897292	127870550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
tx.18617	chr7	-	4422	13	FSM	ENSMUSG00000030846.16	ENSMUST00000106228.8	2835	13	36	-1623	15	-3	multi-exon	FALSE	canonical	3	12	junction_12	81.5772895275803	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGCTTTCTCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	128063361	128041503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128060320_128060381_128062848
tx.18618	chr7	-	3404	6	ISM	ENSMUSG00000030846.16	ENSMUST00000106226.9	4451	12	15943	3	-24	-3	3prime_fragment	FALSE	canonical	3	187	junction_2	26.4529771481397	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGCTTTCTCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	128047453	128041503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374
tx.18619	chr7	-	1179	9	ISM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	12962	-29	-47	29	3prime_fragment	FALSE	canonical	3	163	junction_7	31.8119474411737	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGGTAATACACTTCG	NA	False	NA	NA	False	NA	NA	NA	128050117	128043974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065
tx.1862	chr10	+	1253	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-39	197	-33	108	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	1720	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTATGATTTCTTTC	18	False	NA	NA	False	NA	NA	NA	81395288	81401999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
tx.18620	chr7	-	1859	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-250	-29	47	29	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGGTAATACACTTCG	NA	False	NA	NA	False	NA	NA	NA	128063329	128043974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
tx.18621	chr7	-	8440	5	ISM	ENSMUSG00000030846.16	ENSMUST00000141079.8	4266	11	8721	2055	2097	0	intron_retention	FALSE	canonical	3	231	junction_2	12.1937483982572	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	NA	NA	NA	128054655	128044003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374
tx.18622	chr7	+	2594	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	-32	0	-32	0	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	7110	False	NA	NA	False	NA	NA	NA	128125307	128148705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
tx.18623	chr7	+	4606	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	-23	151	9	0	multi-exon	TRUE	canonical	3	45	junction_6	8.64088073894081	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCGTATGAGAATTTC	7153	False	NA	NA	False	NA	NA	NA	128213060	128297998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
tx.18624	chr7	-	3693	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	6	538	-3	-538	multi-exon	TRUE	canonical	3	440	junction_10	48.8278608992858	1021	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGAAAATGCATTTTC	3868	False	NA	NA	False	NA	NA	NA	128342213	128298702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
tx.18625	chr7	+	3456	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	1	1048	1	-1048	multi-exon	TRUE	canonical	3	121	junction_10	14.275615919341	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCAATATGTTATTTTT	1932	False	NA	NA	False	NA	NA	NA	128346667	128385512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
tx.18626	chr7	+	4293	20	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	34.6985434804919	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTTGTCTCTCCCTGT	1932	False	NA	NA	False	NA	NA	NA	128346667	128386557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151_128385885_128386092
tx.18627	chr7	+	3417	19	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	2	-1049	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	31.2793072450205	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCAATATGTTATTTT	1967	False	NA	NA	False	NA	NA	NA	128346702	128385511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380789_128380950_128381359_128381462_128385151
tx.18628	chr7	+	4503	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	35.0779561862444	271	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTGTTTGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	129193631	129237460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
tx.18629	chr7	-	4301	16	FSM	ENSMUSG00000030849.19	ENSMUST00000117872.8	4223	16	-17	-61	1	0	multi-exon	FALSE	canonical	1	1	junction_14	4.75347825866024	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGTGTCTTACCAAATG	NA	False	NA	NA	False	NA	NA	NA	129867992	129764180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863797_129867523
tx.1863	chr10	+	2792	6	FSM	ENSMUSG00000054452.11	ENSMUST00000219870.2	1410	6	-1579	197	-23	107	multi-exon	FALSE	canonical	3	2772	junction_5	277.977984739799	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	28	False	NA	NA	False	NA	NA	NA	81395298	81401998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
tx.18630	chr7	-	4663	18	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	4.98232168890816	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGTGTCTTACCAAATG	NA	False	NA	NA	False	NA	NA	NA	129868009	129764180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129844107_129844375_129863478_129863797_129867523
tx.18631	chr7	-	4478	17	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	4.60934851687307	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCGTGTCTTACCAAA	NA	False	NA	NA	False	NA	NA	NA	129868001	129764182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_129765946_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129863478_129863797_129867523
tx.18632	chr7	-	4835	13	FSM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	-87	-3068	-18	3	multi-exon	FALSE	canonical	3	14	junction_6	69.1801191737112	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCGGCCGTGGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	130121278	129993219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
tx.18633	chr7	-	4701	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	-16	0	-16	0	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	130121276	129993222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
tx.18634	chr7	-	4703	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	32	0	-18	0	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	130121278	129993222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
tx.18635	chr7	-	1417	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	18	0	18	0	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	983	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	130149093	130134255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
tx.18636	chr7	+	3774	15	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-30	0	intron_retention	FALSE	canonical	1	5	junction_1	82.3265337741442	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	NA	False	NA	NA	NA	130247628	130366515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_130248161_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
tx.18637	chr7	+	3879	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	48	junction_1	73.3327272702229	105	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	130247660	130366514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
tx.18638	chr7	+	3997	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	10	0	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	281	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	130247668	130366514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
tx.18639	chr7	+	3000	13	ISM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	35863	-1	-122	0	3prime_fragment	FALSE	canonical	3	280	junction_9	29.1046960701075	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	NA	False	NA	NA	NA	130330357	130366515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
tx.1864	chr10	-	1774	11	NIC	ENSMUSG00000034758.13	novel	1855	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_10	15.7445228571716	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	NA	False	NA	NA	NA	81433179	81426737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433129
tx.18640	chr7	+	3859	13	FSM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	89	-171	-40	171	multi-exon	FALSE	canonical	3	31	junction_12	62.5128320160482	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTTTCAGATCCTTG	NA	False	NA	NA	False	NA	NA	NA	130467574	130515213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
tx.18641	chr7	+	5935	11	FSM	ENSMUSG00000040268.18	ENSMUST00000151119.9	2397	11	-52	-3486	-34	-5	multi-exon	FALSE	canonical	3	173	junction_1	25.6961086548139	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	130467580	130515037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
tx.18642	chr7	+	3762	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-11	180	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	65.7594522145338	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTTGAATTCTTGG	NA	False	NA	NA	False	NA	NA	NA	130467603	130515222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
tx.18643	chr7	+	3580	13	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	74.0793024775177	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	130467618	130515038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
tx.18644	chr7	+	3697	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-3	153	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAATTTTA	NA	False	NA	NA	False	NA	NA	NA	130467611	130515195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
tx.18645	chr7	+	3698	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-37	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	71.3206764472189	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	130467577	130515038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
tx.18646	chr7	+	3733	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-9	-1423	2	179	multi-exon	FALSE	canonical	3	88	junction_1	52.7225441975884	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATCCTTGAATTCTTG	NA	False	NA	NA	False	NA	NA	NA	130467618	130515221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
tx.18647	chr7	+	3887	14	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	172	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	91.649318781626	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTTCAGATCCTTGA	NA	False	NA	NA	False	NA	NA	NA	130467618	130515214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
tx.18648	chr7	+	4212	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	219	177	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	84.2151263135074	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAGATCCTTGAATTCT	NA	False	NA	NA	False	NA	NA	NA	130467858	130515219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
tx.18649	chr7	+	2060	9	FSM	ENSMUSG00000006205.14	ENSMUST00000006367.8	2041	9	-21	2	-21	-2	multi-exon	FALSE	canonical	3	73	junction_3	16.015617378047	147	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGCGTGCTTCTTTT	6601	False	NA	NA	False	NA	NA	NA	130537911	130587388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586692
tx.1865	chr10	-	1758	11	NIC	ENSMUSG00000034758.13	novel	1961	14	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_8	22.2405035914208	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	NA	False	NA	NA	NA	81433193	81426737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81433129
tx.18650	chr7	-	2235	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	40	4498	-9	468	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGATTACGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	130964448	130944446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
tx.18651	chr7	-	5837	5	ISM	ENSMUSG00000040177.11	ENSMUST00000208526.2	3703	6	-16	2769	-2	-2444	5prime_fragment	FALSE	canonical	3	85	junction_4	3.96074487943871	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGGTTTATATATATA	NA	False	NA	NA	False	NA	NA	NA	130964441	130947683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
tx.18652	chr7	+	1368	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	158	junction_1	24.4885177174936	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	NA	False	NA	NA	NA	130972870	130989568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_130973119_130975264_130975993_130985653_130985730_130986228_130986323_130989346
tx.18653	chr7	+	1122	6	FSM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	10	3	5	0	multi-exon	FALSE	canonical	3	133	junction_2	32.2713495224479	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCTGATTTGGATAAA	NA	False	NA	NA	False	NA	NA	NA	130972879	130989565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130989346
tx.18654	chr7	+	825	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	59.6547357717726	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	NA	False	NA	NA	NA	130972884	130989568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130989346
tx.18655	chr7	-	4422	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	8	0	8	0	multi-exon	TRUE	canonical	3	63	junction_1	6.97614984548545	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	131012242	130990380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
tx.18656	chr7	-	3959	4	FSM	ENSMUSG00000040167.17	ENSMUST00000121033.8	2231	4	-15	-1713	9	-3	multi-exon	FALSE	canonical	2	3	junction_1	34.7658836600865	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGACTTTTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	131012241	130990383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_130993851_130995483_130995667_130998397_130998581_131012115
tx.18657	chr7	+	3299	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	45	2737	45	-2	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATTCTCCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	131012374	131047936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
tx.18658	chr7	+	2132	9	FSM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	-8	4	-8	-1	multi-exon	FALSE	canonical	3	44	junction_4	579.695609781547	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCCAGGTGTGTTACC	NA	False	NA	NA	False	NA	NA	NA	131162100	131173620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
tx.18659	chr7	+	2056	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	159	3	1	-3	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	1001	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTTCCAGGTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	131162109	131173618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
tx.1866	chr10	-	1959	14	FSM	ENSMUSG00000034758.13	ENSMUST00000142948.8	1961	14	2	0	2	0	multi-exon	FALSE	canonical	2	14	junction_8	19.8357158000858	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	NA	False	NA	NA	NA	81436707	81426737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
tx.18660	chr7	+	1895	7	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	433	145	46	-145	3prime_fragment	FALSE	canonical	3	1325	junction_5	56.2840020688729	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTTTGAAGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	131162383	131173476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
tx.18661	chr7	+	3944	4	ISM	ENSMUSG00000066979.7	ENSMUST00000209131.2	4015	6	3409	1	3106	-1	3prime_fragment	FALSE	canonical	3	1325	junction_2	40.5490101262931	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCCAGGTGTGTTACC	NA	False	NA	NA	False	NA	NA	NA	131165544	131173620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_131168081_131169912_131170091_131170233_131170451_131172607
tx.18662	chr7	-	2139	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	13	0	13	0	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	563	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGATGTGAATCTATTTA	NA	False	NA	NA	False	NA	NA	NA	132178114	132159206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
tx.18663	chr7	-	3647	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	-119	-264	-119	264	multi-exon	FALSE	canonical	3	59	junction_1	0	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAATTTCTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	132201485	132196342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_132199546_132201041
tx.18664	chr7	-	3360	3	NNC	ENSMUSG00000048528.8	novel	3264	2	NA	NA	-171	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTGACGAATTATTC	NA	False	NA	NA	False	NA	NA	NA	132201537	132196608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_132198239_132198311_132199546_132201041
tx.18665	chr7	+	1602	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	9	1	9	-1	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	271	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGACTCAGCCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	132212376	132308148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
tx.18666	chr7	-	4503	4	NIC	ENSMUSG00000030956.16	novel	5052	5	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	49.9355139710763	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	NA	False	NA	NA	NA	132415591	132313812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_132317732_132373306_132373359_132380864_132381115_132415309
tx.18667	chr7	-	5829	10	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-2	0	multi-exon	FALSE	canonical	3	29	junction_4	114.264799673585	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	NA	False	NA	NA	NA	132454370	132313812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
tx.18668	chr7	-	5633	9	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-17	4	multi-exon	FALSE	canonical	3	26	junction_5	130.145051288937	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGCATGGCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	132454385	132313806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132438828_132438937_132452323_132452439_132453154_132453221_132454227
tx.18669	chr7	-	5002	4	ISM	ENSMUSG00000030956.16	ENSMUST00000065371.14	5052	5	7533	-1	937	-1	3prime_fragment	FALSE	canonical	3	108	junction_1	13.9124245031395	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCTGCCTGCGCATGGCT	NA	False	NA	NA	False	NA	NA	NA	132381115	132313811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864
tx.1867	chr10	-	1990	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	25	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	15.2183321404185	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	NA	False	NA	NA	NA	81436709	81426738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
tx.18670	chr7	-	5525	5	FSM	ENSMUSG00000030956.16	ENSMUST00000097999.9	5465	5	-61	1	-61	-1	multi-exon	FALSE	canonical	3	27	junction_4	41.3430768085782	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCTGCCTGCGCATGGCT	NA	False	NA	NA	False	NA	NA	NA	132415318	132313811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132414794
tx.18671	chr7	-	5278	5	NIC	ENSMUSG00000030956.16	novel	5052	5	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	NA	False	NA	NA	NA	132415587	132313812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
tx.18672	chr7	-	5126	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	38.4537059332387	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTGCGCATGGCTG	NA	False	NA	NA	False	NA	NA	NA	132415615	132313810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415491
tx.18673	chr7	-	1078	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	29	0	-5	0	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	132454373	132429185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
tx.18674	chr7	-	2069	3	FSM	ENSMUSG00000030960.17	ENSMUST00000154914.2	811	3	-1	-1257	-1	1257	multi-exon	FALSE	canonical	3	351	junction_1	20.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGGTACTGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	132454369	132450577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_132452439_132453154_132453221_132454227
tx.18675	chr7	+	2877	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	15	0	3	0	multi-exon	FALSE	canonical	3	195	junction_8	19.6273883896967	322	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATATTTTAGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	132460968	132486840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
tx.18676	chr7	+	3612	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	33	1363	33	1032	multi-exon	TRUE	canonical	3	56	junction_1	22.7129157795708	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTAAGGTGGTCAATGC	NA	False	NA	NA	False	NA	NA	NA	132532903	132586757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
tx.18677	chr7	+	3779	11	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	33	1034	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	39.6359685134601	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAGGTGGTCAATGCAT	NA	False	NA	NA	False	NA	NA	NA	132532903	132586759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_132533275_132549772_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
tx.18678	chr7	+	2716	9	FSM	ENSMUSG00000030967.16	ENSMUST00000033265.5	2210	9	29	-535	29	535	multi-exon	FALSE	canonical	3	94	junction_3	13.1142813375343	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTAGTTCCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	132551341	132586260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
tx.18679	chr7	-	4628	6	ISM	ENSMUSG00000030970.17	ENSMUST00000169570.8	3604	9	19900	-3072	19900	3057	3prime_fragment	FALSE	canonical	3	827	junction_5	69.5384785568393	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCGTGGATAATTTG	2548	False	NA	NA	False	NA	NA	NA	132597077	132586234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887
tx.1868	chr10	-	1710	8	NNC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	12	0	intron_retention	FALSE	canonical	1	2	junction_6	79.6005332768517	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9901	False	NA	NA	False	NA	NA	NA	81463388	81457620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462261_81462452_81463305
tx.18680	chr7	-	2446	8	ISM	ENSMUSG00000030970.17	ENSMUST00000169570.8	3604	9	15910	-580	15910	565	3prime_fragment	FALSE	canonical	3	751	junction_6	77.2758113539299	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAGTACATCTCACCT	NA	False	NA	NA	False	NA	NA	NA	132601067	132588726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919
tx.18681	chr7	-	3293	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-11	875	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	311.11800012214	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTACTTACCTTCTGA	NA	False	NA	NA	False	NA	NA	NA	132725596	132588416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869_132725086_132725386
tx.18682	chr7	-	1927	5	ISM	ENSMUSG00000030970.17	ENSMUST00000169570.8	3604	9	23482	-571	23482	556	3prime_fragment	FALSE	canonical	3	845	junction_4	67.819613682179	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	6130	False	NA	NA	False	NA	NA	NA	132593495	132588735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290
tx.18683	chr7	-	2801	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	-225	-579	-24	558	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTGACATTTAAGTACAT	NA	False	NA	NA	False	NA	NA	NA	132725120	132588733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
tx.18684	chr7	-	2960	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	-23	-616	-23	558	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	639	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTGACATTTAAGTACAT	NA	False	NA	NA	False	NA	NA	NA	132725119	132588733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
tx.18685	chr7	-	3139	12	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-17	555	combination_of_known_junctions	FALSE	canonical	3	44	junction_11	251.022010164003	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCCTGACATTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	132725602	132588736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132725086_132725386
tx.18686	chr7	-	2871	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-133	552	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_10	265.033658239855	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCCTGACATTTAA	NA	False	NA	NA	False	NA	NA	NA	132724477	132588739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724310
tx.18687	chr7	-	2823	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	61	552	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	266.085625316363	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCCTGACATTTAA	NA	False	NA	NA	False	NA	NA	NA	132724834	132588739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724715
tx.18688	chr7	-	3065	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	119	552	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	264.508147322535	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCCTGACATTTAA	NA	False	NA	NA	False	NA	NA	NA	132724776	132588739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724415
tx.18689	chr7	+	4483	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	151	790	1	2	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	NA	False	NA	NA	NA	133239422	133273910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
tx.1869	chr10	-	2027	8	NIC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	-33	0	intron_retention	FALSE	canonical	3	27	junction_7	72.5548349983146	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9676	False	NA	NA	False	NA	NA	NA	81463187	81457620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81462725
tx.18690	chr7	+	4480	25	NIC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	29	junction_24	36.1270664537761	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	NA	False	NA	NA	NA	133239422	133273910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273097
tx.18691	chr7	+	4382	24	FSM	ENSMUSG00000039990.17	ENSMUST00000128901.9	4380	24	0	-2	0	2	multi-exon	FALSE	canonical	3	27	junction_6	37.3605535837356	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	NA	False	NA	NA	NA	133239421	133273910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
tx.18692	chr7	-	1782	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	202	-222	-10	100	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAAACATAACTGCAG	NA	False	NA	NA	False	NA	NA	NA	133310808	133287871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
tx.18693	chr7	-	2259	10	NIC	ENSMUSG00000030979.14	novel	1644	10	NA	NA	-407	10	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	18.4477908610847	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTAGCACACTCATCA	NA	False	NA	NA	False	NA	NA	NA	133312208	133288074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133311457
tx.18694	chr7	+	1233	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	8	3	-7	-3	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	803	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGAAGTGTTCATG	1315	False	NA	-81	True	NA	NA	NA	133311069	133322871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
tx.18695	chr7	-	2944	12	FSM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	11	0	11	0	multi-exon	FALSE	canonical	3	247	junction_11	48.5725154403017	472	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	133378521	133322670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
tx.18696	chr7	-	2891	12	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	105.850978984921	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	133378513	133322670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133378330
tx.18697	chr7	+	2580	21	FSM	ENSMUSG00000058325.7	ENSMUST00000211593.2	2589	21	5	4	1	-1	multi-exon	FALSE	canonical	3	101	junction_11	23.1652217774836	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGATGTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	134272420	134384911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475
tx.18698	chr7	+	6813	52	FSM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	2	-8	-2	8	multi-exon	FALSE	canonical	3	98	junction_42	17.5348283073368	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTGGCTGGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	134272417	134775376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
tx.18699	chr7	-	5333	3	ISM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	17564	0	12114	0	3prime_fragment	FALSE	canonical	3	286	junction_2	30	233	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	NA	False	NA	NA	NA	135300526	135291512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_135291863_135294808_135295226_135295960
tx.187	chr1	-	3874	8	FSM	ENSMUSG00000060771.16	ENSMUST00000193669.2	1981	8	-25	-1868	-19	0	multi-exon	FALSE	canonical	2	6	junction_4	7.29830844253989	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACAGTATAATTTTTTG	NA	False	NA	NA	False	NA	NA	NA	37904179	37871483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880390_37881535_37881602_37888311_37888528_37894325_37894455_37904103
tx.1870	chr10	-	1672	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	219	0	-12	0	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9877	False	NA	NA	False	NA	NA	NA	81463412	81457620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
tx.18700	chr7	-	10165	14	FSM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	-104	0	-104	0	multi-exon	FALSE	canonical	3	124	junction_9	63.2390037685062	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	NA	False	NA	NA	NA	135318194	135291512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
tx.18701	chr7	-	9205	13	NIC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-104	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	77.8015191939649	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	NA	False	NA	NA	NA	135318194	135291512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
tx.18702	chr7	+	846	5	FSM	ENSMUSG00000054612.5	ENSMUST00000081510.4	2894	5	-25	2073	-25	-2073	multi-exon	FALSE	canonical	3	172	junction_1	21.7887585695009	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGCCCTTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	136496317	136729922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_136496417_136552996_136553134_136687677_136687839_136723217_136723358_136729613
tx.18703	chr7	-	1280	5	FSM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	-15	-566	6	3	multi-exon	FALSE	canonical	3	25	junction_1	88.1373218336024	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	137012479	136977299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_136978081_136978683_136978847_136989099_136989163_136989268_136989431_137012368
tx.18704	chr7	-	1122	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	7	-3	1	3	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	137012484	136977299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
tx.18705	chr7	-	1180	5	NNC	ENSMUSG00000040139.15	novel	699	5	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	104.760142707043	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	137012482	136977299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_136978081_136989099_136989163_136989268_136989431_136990647_136990708_137012368
tx.18706	chr7	+	1247	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	31	407	-10	-407	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	1759	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	NA	False	NA	NA	NA	137039373	137069916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
tx.18707	chr7	-	1521	2	FSM	ENSMUSG00000041775.8	ENSMUST00000075667.5	1502	2	-12	-7	1	-3	multi-exon	FALSE	canonical	3	55	junction_1	0	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCAACTTGTTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	138448001	138437554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_138438760_138447685
tx.18708	chr7	+	1958	9	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	209.072318528781	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	138448080	138484783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474729_138474781_138475848_138476014_138478184_138478447_138483937
tx.18709	chr7	+	2083	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	-5	3	-5	0	multi-exon	FALSE	canonical	3	482	junction_4	89.4111814875522	479	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	138448082	138484783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
tx.1871	chr10	+	2020	5	FSM	ENSMUSG00000054708.18	ENSMUST00000132458.2	829	5	-1058	-133	-1058	0	multi-exon	FALSE	canonical	3	22	junction_1	34.9070193514141	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGTCGCAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	81478578	81483441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
tx.18710	chr7	+	1918	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	212.306863011144	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	138448084	138484786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
tx.18711	chr7	+	1945	8	FSM	ENSMUSG00000041769.14	ENSMUST00000155672.8	1938	8	-7	0	1	0	multi-exon	FALSE	canonical	3	482	junction_3	92.005767343628	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	138448316	138484783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
tx.18712	chr7	+	5916	4	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	680	junction_2	35.1220095603249	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCCACTGCAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	138470136	138484782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_138474781_138475848_138476014_138478184_138478447_138483937
tx.18713	chr7	-	1626	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	2	128	2	-128	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	290	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	NA	False	NA	NA	NA	138511233	138492692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
tx.18714	chr7	+	2644	14	FSM	ENSMUSG00000025478.16	ENSMUST00000026551.15	3552	14	-1	909	-1	0	multi-exon	FALSE	canonical	1	1	junction_6	3.36181128975572	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGTTAGAAACTGCCT	NA	False	NA	NA	False	NA	NA	NA	138665915	138681711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_138666078_138669425_138669515_138670074_138670260_138671777_138671943_138673521_138673584_138673676_138673758_138674309_138674379_138674772_138674894_138676083_138676241_138676582_138676725_138677737_138677909_138678385_138678566_138679655_138679822_138680817
tx.18715	chr7	+	2617	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	-48	-26	-43	26	multi-exon	FALSE	canonical	3	21	junction_2	19.5	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTGCTCCTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	138828354	138847103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_138828560_138834685_138836382_138846387
tx.18716	chr7	+	2591	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	-269	735	-269	79	multi-exon	FALSE	canonical	3	49	junction_2	5.5	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCTTGCCTGAATAGT	NA	False	NA	NA	False	NA	NA	NA	138828128	138847156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_138828560_138834685_138836077_138846387
tx.18717	chr7	+	2847	16	FSM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	-21	0	-21	0	multi-exon	TRUE	canonical	3	132	junction_13	16.0850517216728	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTGCTTATTCTCC	NA	False	NA	NA	False	NA	NA	NA	138969003	139159568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
tx.18718	chr7	-	3764	4	FSM	ENSMUSG00000041309.18	ENSMUST00000097974.9	1907	4	-5	-1852	-5	1852	multi-exon	FALSE	canonical	3	11	junction_1	33.9803864996658	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTCTGCTTGCTTGGTA	NA	False	NA	NA	False	NA	NA	NA	139162718	139157439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_139159538_139160780_139161605_139161796_139161970_139162049
tx.18719	chr7	-	1305	3	FSM	ENSMUSG00000041309.18	ENSMUST00000106095.3	1299	3	-12	6	-5	-6	multi-exon	FALSE	canonical	3	81	junction_2	2	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCAAGGCTGCACATCG	NA	False	NA	NA	False	NA	NA	NA	139162718	139161141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_139161605_139161796_139161970_139162049
tx.1872	chr10	+	3406	3	NIC	ENSMUSG00000054708.18	novel	829	5	NA	NA	-194	4	intron_retention	FALSE	canonical	3	98	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCAAGAGTTGTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	81479442	81483448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_81482268_81482626_81482693_81482933
tx.18720	chr7	+	1225	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	2	0	2	0	multi-exon	FALSE	canonical	3	805	junction_1	0	429	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTGAATGAATTCGGAC	NA	False	NA	NA	False	NA	NA	NA	139523703	139525025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_139524343_139524439
tx.18721	chr7	-	2865	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	288	-93	9	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616294	139575867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
tx.18722	chr7	-	2832	17	ISM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	2466	-41	-23	0	3prime_fragment	FALSE	canonical	3	352	junction_11	31.5017360632712	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139613713	139575867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
tx.18723	chr7	-	3072	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-73	-39	-7	-2	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTGGCTCAATGATT	NA	False	NA	NA	False	NA	NA	NA	139616252	139575869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
tx.18724	chr7	+	1071	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	5	0	5	0	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	NA	False	NA	NA	NA	139616329	139620515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
tx.18725	chr7	+	1264	5	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	23	1	intron_retention	FALSE	canonical	3	319	junction_3	26.6176633084123	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATCTGTTCTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	139616347	139620513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
tx.18726	chr7	-	674	2	ISM	ENSMUSG00000025468.16	ENSMUST00000211044.2	1029	6	11390	5	11390	1	3prime_fragment	FALSE	canonical	3	34	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGGTCGTGGTTTCTCT	9429	False	NA	NA	False	NA	NA	NA	139650750	139649798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_139649947_139650224
tx.18727	chr7	-	865	6	NNC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	171.429752376885	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1588	False	NA	NA	False	NA	NA	NA	139682237	139679382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681922
tx.18728	chr7	-	639	6	FSM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	46	0	8	0	multi-exon	FALSE	canonical	3	247	junction_5	86.8506764510214	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1517	False	NA	NA	False	NA	NA	NA	139682308	139679382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
tx.18729	chr7	-	1500	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	55	2	1	-2	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	1256	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTGTGTGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	139696334	139685624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
tx.1873	chr10	+	2162	4	FSM	ENSMUSG00000096856.8	ENSMUST00000189672.7	4735	4	-13	2586	-13	544	multi-exon	FALSE	canonical	2	7	junction_1	17.4610678049451	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACTGCCATCTATTT	NA	False	NA	NA	False	NA	NA	NA	81484879	81500609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81485001_81497831_81497959_81498158_81498220_81498756
tx.18730	chr7	+	1756	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	9	2890	9	0	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	224	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	NA	False	NA	NA	NA	139705578	139714247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
tx.18731	chr7	+	1952	6	ISM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	256	2890	205	0	3prime_fragment	FALSE	canonical	3	213	junction_1	25.4165300542777	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	NA	False	NA	NA	NA	139705825	139714247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
tx.18732	chr7	+	1969	10	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	3	168	intron_retention	FALSE	non_canonical	0	0	junction_1	157.516920509873	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	139717479	139730528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
tx.18733	chr7	+	1379	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-37	168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	150.393783116191	191	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	139717524	139730528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
tx.18734	chr7	-	1469	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	-10	1	-10	-1	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTCTATATTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	140367775	140357142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
tx.18735	chr7	-	3893	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	-42	0	4	0	multi-exon	FALSE	canonical	3	50	junction_1	4	91	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACATTGGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140402087	140389601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140393228_140398500_140398628_140401947
tx.18736	chr7	+	702	4	FSM	ENSMUSG00000025481.13	ENSMUST00000106050.8	719	4	98	-81	98	2	multi-exon	FALSE	canonical	3	242	junction_1	5.43650214343336	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTGAACCTATCATTGG	NA	False	NA	NA	False	NA	NA	NA	140415028	140417881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140415172_140415524_140415665_140416659_140416796_140417598
tx.18737	chr7	-	1467	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	792	9	0	-9	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCGTGCCCGTCTCTA	NA	False	NA	NA	False	NA	NA	NA	140436230	140433315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
tx.18738	chr7	-	1599	3	ISM	ENSMUSG00000025484.10	ENSMUST00000210710.2	489	4	1271	-1390	11	-7	3prime_fragment	FALSE	canonical	3	105	junction_1	3	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGTGCCCGTCTCTATG	NA	False	NA	NA	False	NA	NA	NA	140436219	140433313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_140434735_140434986_140435079_140436133
tx.18739	chr7	+	3616	9	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-507	0	intron_retention	FALSE	canonical	3	213	junction_1	24.9446261747896	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	NA	False	NA	NA	NA	140436362	140443056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
tx.1874	chr10	+	2416	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	-32	0	-32	0	multi-exon	FALSE	canonical	3	15	junction_1	8.5764535535124	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATACTGCCATCCATT	NA	False	NA	NA	False	NA	NA	NA	81540626	81557810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
tx.18740	chr7	+	2381	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	438	587	-27	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	359	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	NA	False	NA	NA	NA	140437307	140443056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
tx.18741	chr7	-	1296	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	76.8188706561668	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCCTGTCTCTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	140461753	140443579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140457965_140461675
tx.18742	chr7	-	1410	7	FSM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	10	-4	10	0	multi-exon	FALSE	canonical	3	125	junction_6	42.0135560133737	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTGTCTCTTTGGGAT	NA	False	NA	NA	False	NA	NA	NA	140461772	140443578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
tx.18743	chr7	+	1560	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	429	0	-17	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	818	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	140462309	140478555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
tx.18744	chr7	+	2980	14	FSM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	-5	6	5	0	multi-exon	FALSE	canonical	3	42	junction_1	11.3032434995212	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGAGTGTGTGATGGA	NA	False	NA	NA	False	NA	NA	NA	140521488	140527571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
tx.18745	chr7	+	3134	13	FSM	ENSMUSG00000062031.14	ENSMUST00000169736.8	3145	13	13	-2	-2	2	multi-exon	FALSE	canonical	3	42	junction_1	11.7505910016854	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGTGATGGATT	NA	False	NA	NA	False	NA	NA	NA	140521491	140527573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
tx.18746	chr7	+	2915	13	ISM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	703	4	-71	2	3prime_fragment	FALSE	canonical	3	43	junction_3	10.7480618407848	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGTGATGGATT	NA	False	NA	NA	False	NA	NA	NA	140522196	140527573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
tx.18747	chr7	-	645	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	10	0	10	0	multi-exon	FALSE	canonical	3	9574	junction_1	0	2094	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	140535890	140534749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140535087_140535582
tx.18748	chr7	+	651	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	81	4	81	-4	multi-exon	FALSE	canonical	3	1139	junction_1	0	236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGACTAGTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	140548033	140549734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140548352_140549401
tx.18749	chr7	-	647	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	28	3	28	-3	multi-exon	FALSE	canonical	3	1854	junction_1	0	432	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACTGCTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	140590655	140589501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140589803_140590309
tx.1875	chr10	+	1847	4	Antisense	novelGene_ENSMUSG00000112697.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	10.9645894689324	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGTAATCAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	81682336	81693748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_+_81682454_81691309_81691437_81691636_81691698_81692206
tx.18750	chr7	+	2803	14	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-128	3323	-128	-1775	5prime_fragment	FALSE	canonical	3	174	junction_7	12.6579955787244	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGAGCACTGCAGGGT	NA	False	NA	NA	False	NA	NA	NA	140640888	140648990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
tx.18751	chr7	+	3681	20	FSM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-126	1	-126	-1	multi-exon	FALSE	canonical	3	132	junction_14	21.3235203654468	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	140640890	140652312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
tx.18752	chr7	+	1903	7	ISM	ENSMUSG00000055629.6	ENSMUST00000209546.2	3076	16	3562	0	-2219	0	3prime_fragment	FALSE	canonical	3	132	junction_1	32.7503180646133	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	140647968	140652313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
tx.18753	chr7	+	3004	14	FSM	ENSMUSG00000054065.13	ENSMUST00000106039.9	2919	14	-84	-1	-84	1	multi-exon	TRUE	canonical	0	0	junction_4	30.8055554814503	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCCGTGTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	140658046	140670424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140658348_140659818_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140667724_140668196_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
tx.18754	chr7	+	2855	13	FSM	ENSMUSG00000054065.13	ENSMUST00000066873.5	2848	13	-6	-1	-6	1	multi-exon	FALSE	canonical	0	0	junction_3	30.7431112428279	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCCGTGTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	140659666	140670424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140667724_140668196_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
tx.18755	chr7	+	1443	7	FSM	ENSMUSG00000054065.13	ENSMUST00000160403.8	1425	7	-15	-3	-15	0	multi-exon	FALSE	canonical	3	51	junction_3	7.83156008298049	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCTCCGTGTGTTTC	599	False	NA	NA	False	NA	NA	NA	140668043	140670423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
tx.18756	chr7	-	1778	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-108	0	combination_of_known_splicesites	TRUE	canonical	3	90	junction_9	19.9616917069288	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	140676760	140671087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
tx.18757	chr7	-	1853	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-123	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	41.7703894176098	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	140676775	140671087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676472
tx.18758	chr7	-	1659	10	FSM	ENSMUSG00000025494.9	ENSMUST00000209294.2	1612	10	-45	-2	-15	0	multi-exon	FALSE	canonical	3	23	junction_9	39.3474550920669	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	140680500	140671087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
tx.18759	chr7	-	3027	24	FSM	ENSMUSG00000054662.9	ENSMUST00000067836.9	3019	24	-14	6	-14	0	multi-exon	FALSE	canonical	3	82	junction_10	30.0592986723404	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	NA	False	NA	NA	NA	140697733	140681130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
tx.1876	chr10	-	4186	5	NNC	ENSMUSG00000096718.3	novel	4067	4	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	5.06828373317832	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAACAGTCCTGGAG	4786	False	NA	NA	False	NA	NA	NA	81766374	81737746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_81741500_81742039_81742101_81742300_81742428_81746721_81746858_81766265
tx.18760	chr7	+	2143	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	31	1450	16	554	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	342	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTCTGGCTGCCCTTTG	6841	False	NA	NA	False	NA	NA	NA	140711229	140736069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
tx.18761	chr7	+	2083	12	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	2040	556	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	84.6823915463925	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGCTGCCCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	140714505	140736071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_140714645_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
tx.18762	chr7	-	1653	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	5	0	5	0	multi-exon	FALSE	canonical	3	224	junction_9	176.376561249007	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTCCTTGTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	140748597	140740238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
tx.18763	chr7	-	1592	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	501	-2	-36	0	multi-exon	FALSE	canonical	3	441	junction_9	110.454616120026	352	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTCCTTGTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	140748638	140740238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
tx.18764	chr7	-	1641	10	FSM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	17	-2	17	0	multi-exon	FALSE	canonical	3	317	junction_9	147.871899850621	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTCCTTGTCGTTCTT	8009	False	NA	NA	False	NA	NA	NA	140752753	140740238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
tx.18765	chr7	-	1211	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	-13	1	-13	0	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	NA	False	NA	NA	NA	140773931	140770839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
tx.18766	chr7	-	1068	6	FSM	ENSMUSG00000025499.19	ENSMUST00000026572.11	2828	6	-62	1822	-17	0	multi-exon	FALSE	canonical	3	237	junction_1	141.994366085419	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	NA	False	NA	NA	NA	140773935	140770839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140771108_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
tx.18767	chr7	-	1283	6	FSM	ENSMUSG00000025499.19	ENSMUST00000168550.8	2272	6	-4	993	-3	0	multi-exon	FALSE	canonical	3	72	junction_2	252.24797323269	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	NA	False	NA	NA	NA	140773921	140770839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
tx.18768	chr7	-	1145	7	NIC	ENSMUSG00000025499.19	novel	2272	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	236.49154318918	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	NA	False	NA	NA	NA	140773930	140770839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_140771108_140771254_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
tx.18769	chr7	+	2552	13	FSM	ENSMUSG00000038637.16	ENSMUST00000070458.11	2502	13	-49	-1	-30	1	multi-exon	FALSE	canonical	3	14	junction_2	5.23609269080167	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGCCTGGCCTGGCTG	367	False	NA	NA	False	NA	NA	NA	140774039	140789963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140774531_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
tx.1877	chr10	-	4033	4	NNC	ENSMUSG00000096718.3	novel	4067	4	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	2.35702260395516	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAACAGTCCTGGAGTG	4805	False	NA	NA	False	NA	NA	NA	81766355	81737744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_81741500_81742039_81742101_81742300_81742428_81766265
tx.18770	chr7	+	2250	13	FSM	ENSMUSG00000038637.16	ENSMUST00000047093.11	2197	13	-45	-8	-45	0	multi-exon	FALSE	canonical	1	3	junction_1	6.88597608670453	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCCTGGCTGACCTA	1273	False	NA	NA	False	NA	NA	NA	140774945	140789968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140775130_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
tx.18771	chr7	+	1517	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	8	0	-7	0	multi-exon	TRUE	canonical	3	288	junction_1	23.1395764870492	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	140795780	140798571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
tx.18772	chr7	+	1583	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	-20	-3	-1	0	multi-exon	FALSE	canonical	3	288	junction_1	22.576259654779	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	140795786	140798571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
tx.18773	chr7	+	5385	18	FSM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	-14	-123	-9	-1	multi-exon	FALSE	canonical	3	178	junction_2	28.6346754247049	202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGGACTGATGCTTA	NA	False	NA	NA	False	NA	NA	NA	140808687	140842662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
tx.18774	chr7	+	3130	5	FSM	ENSMUSG00000038611.18	ENSMUST00000142572.8	2519	5	-614	3	-614	0	multi-exon	FALSE	canonical	3	53	junction_1	95.4865828271177	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	2908	False	NA	NA	False	NA	NA	NA	140838488	140842660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
tx.18775	chr7	+	3433	5	ISM	ENSMUSG00000038611.18	ENSMUST00000122143.8	4864	13	14729	-152	-962	0	3prime_fragment	FALSE	canonical	3	188	junction_1	45.7083143421413	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	2560	False	NA	NA	False	NA	NA	NA	140838140	140842660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
tx.18776	chr7	+	2178	5	FSM	ENSMUSG00000038611.18	ENSMUST00000130687.2	1189	5	-993	4	214	1	multi-exon	FALSE	canonical	3	56	junction_2	94.5647926027441	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTTTCTATGGACTGA	3736	False	NA	NA	False	NA	NA	NA	140839316	140842656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
tx.18777	chr7	-	5309	11	ISM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	-75	0	-57	0	intron_retention	FALSE	canonical	3	74	junction_2	11.2911469745106	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTGTCAAGCCATTT	NA	False	NA	NA	False	NA	NA	NA	140907660	140877092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994
tx.18778	chr7	-	5484	12	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-496	-2	intron_retention	FALSE	canonical	0	0	junction_11	32.0206544912746	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	140908099	140877094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
tx.18779	chr7	-	5395	11	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-497	-2	intron_retention	FALSE	canonical	0	0	junction_10	42.7906531850123	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	140908100	140877094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_140877530_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
tx.1878	chr10	+	2936	4	Antisense	novelGene_ENSMUSG00000112051.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	11.0855260988773	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCATCTCTCCCTTTATG	2303	False	NA	NA	False	NA	NA	NA	81814476	81827937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_+_81814609_81824424_81824552_81824751_81824813_81825321
tx.18780	chr7	-	2660	12	FSM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	-527	2	-509	-2	multi-exon	FALSE	canonical	0	0	junction_11	32.0206544912746	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	140908112	140877094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
tx.18781	chr7	-	5145	11	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	-513	0	intron_retention	FALSE	canonical	0	0	junction_10	42.9842994592212	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTTTGGACTTTT	NA	False	NA	NA	False	NA	NA	NA	140908116	140890205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_140890375_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
tx.18782	chr7	+	3112	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	79	0	3	0	multi-exon	TRUE	canonical	3	69	junction_6	10.2434125173206	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	140918871	140942933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
tx.18783	chr7	+	3321	20	FSM	ENSMUSG00000025504.15	ENSMUST00000140025.8	3341	20	18	2	-6	-2	multi-exon	FALSE	canonical	3	69	junction_6	10.3329610036278	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAGATATCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	140918886	140942931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
tx.18784	chr7	+	1257	8	FSM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	-28	0	-28	0	multi-exon	FALSE	canonical	3	3267	junction_3	222.11993450864	1092	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	3812	False	NA	NA	False	NA	NA	NA	140972083	140982881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
tx.18785	chr7	-	1467	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	41	390	-5	0	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5478	False	NA	NA	False	NA	NA	NA	140994008	140988096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
tx.18786	chr7	-	2622	11	NNC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-3	0	intron_retention	TRUE	canonical	2	2	junction_10	49.3238279130888	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	465	False	NA	NA	False	NA	NA	NA	141017547	141009661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141016705_141016780_141017481
tx.18787	chr7	-	2545	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	261	5	0	0	multi-exon	FALSE	canonical	3	72	junction_9	20.9708792800344	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	468	False	NA	NA	False	NA	NA	NA	141017544	141009661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
tx.18788	chr7	-	3833	15	FSM	ENSMUSG00000025507.14	ENSMUST00000106005.9	2900	15	-531	-402	106	0	multi-exon	FALSE	canonical	3	24	junction_13	13.1049531063017	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	NA	False	NA	NA	NA	141023799	141018025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880
tx.18789	chr7	-	3352	16	FSM	ENSMUSG00000025507.14	ENSMUST00000026580.12	3357	16	3	2	3	-2	multi-exon	FALSE	canonical	3	24	junction_13	13.4154140201983	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	NA	False	NA	NA	NA	141023935	141018027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
tx.1879	chr10	+	2335	4	Genic_Genomic	ENSMUSG00000112790.2	novel	2758	1	NA	NA	-17471	-2659	multi-exon	FALSE	canonical	3	45	junction_1	10.7806410858642	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTATACTGCCATCC	NA	False	NA	NA	False	NA	NA	NA	81832835	81850405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr10_+_81832952_81847436_81847564_81847762_81847824_81848374
tx.18790	chr7	-	3433	15	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	24	junction_12	13.4416729400983	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAATACCTTTGCAGA	NA	False	NA	NA	False	NA	NA	NA	141023945	141018033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
tx.18791	chr7	+	460	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	268	236	7	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	1620	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2385	False	NA	NA	False	NA	NA	NA	141027550	141031262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
tx.18792	chr7	+	2008	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	-29	646	-29	3	multi-exon	FALSE	canonical	3	56	junction_3	8.3132048573339	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCACTTCTGCATGTTAC	9916	False	NA	NA	False	NA	NA	NA	141035081	141040010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
tx.18793	chr7	+	1753	10	NIC	ENSMUSG00000048200.13	novel	1158	8	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	4.21929723245501	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTCTTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	141041695	141046526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_141041847_141043296_141043486_141043562_141043675_141044043_141044207_141044608_141044756_141044851_141044943_141045176_141045270_141045431_141045599_141045678_141045751_141045958
tx.18794	chr7	+	1872	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	-1	-6	0	6	multi-exon	FALSE	canonical	3	98	junction_1	68.1968938187848	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCTTGCTGACAGGAC	NA	False	NA	NA	False	NA	NA	NA	141047304	141051392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
tx.18795	chr7	+	1757	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	-33	-16	-3	6	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCTTGCTGACAGGAC	NA	False	NA	NA	False	NA	NA	NA	141047301	141051392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
tx.18796	chr7	-	395	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	0	1255	0	-1255	multi-exon	FALSE	canonical	3	1072	junction_1	0	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGCTCCATGTCCATG	8000	False	NA	NA	False	NA	NA	NA	141055045	141053027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141053318_141054940
tx.18797	chr7	-	354	2	NNC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	-222	-1257	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	0	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGGTGCTCCATGTCCA	7778	False	NA	NA	False	NA	NA	NA	141055267	141053029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_141053318_141055201
tx.18798	chr7	+	1423	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	43	0	43	0	multi-exon	FALSE	canonical	3	56	junction_1	68.6787850082111	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	3534	False	NA	NA	False	NA	NA	NA	141055195	141073340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
tx.18799	chr7	+	1659	7	FSM	ENSMUSG00000025511.16	ENSMUST00000239217.2	1157	7	-30	-472	-30	-2	multi-exon	FALSE	canonical	3	206	junction_2	25.1241362482817	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAAGTTCTTTCAT	624	False	NA	NA	False	NA	NA	NA	141061946	141073338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
tx.188	chr1	-	3610	8	FSM	ENSMUSG00000060771.16	ENSMUST00000155852.7	2861	8	-9	-740	-3	-292	multi-exon	FALSE	canonical	2	9	junction_4	6.49960752347276	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTGTGGACATATGT	NA	False	NA	NA	False	NA	NA	NA	37904163	37871775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
tx.1880	chr10	-	190	2	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	439	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACAAAGCTTAGACCCA	NA	False	NA	NA	False	NA	NA	NA	81879619	81873334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_-_81873475_81879569
tx.18800	chr7	-	2092	12	ISM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	6841	2048	-41	165	3prime_fragment	FALSE	canonical	3	185	junction_5	13.5207217764205	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGAGTTTCTGAGAT	4926	False	NA	NA	False	NA	NA	NA	141112888	141075096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731
tx.18801	chr7	-	2138	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-3	2047	0	166	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGAGTTTCTGAGATT	NA	False	NA	NA	False	NA	NA	NA	141119732	141075095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
tx.18802	chr7	+	4601	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	3	207	junction_7	117.945873284924	400	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATGTGTGTGGTTTTTG	9641	False	NA	NA	False	NA	NA	NA	141142130	141212921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
tx.18803	chr7	+	4590	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	51	5	16	-5	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	496	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACATGTGTGTGGTTTT	9647	False	NA	NA	False	NA	NA	NA	141142136	141212919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
tx.18804	chr7	-	3793	7	FSM	ENSMUSG00000025139.15	ENSMUST00000130439.3	1892	7	-95	-1806	12	0	multi-exon	FALSE	canonical	3	12	junction_6	128.120602905578	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	2781	False	NA	NA	False	NA	NA	NA	141456140	141435319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141452431_141452521_141456012
tx.18805	chr7	-	3712	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	76	0	4	0	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	604	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	2773	False	NA	NA	False	NA	NA	NA	141456148	141435319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
tx.18806	chr7	-	1488	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	16	-14	0	0	multi-exon	FALSE	canonical	3	149	junction_3	10.8857705285386	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGCCATTTCATATTAT	NA	False	NA	NA	False	NA	NA	NA	141614786	141562272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
tx.18807	chr7	-	1980	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	142	5	-39	1	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	2708	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTATTGGTGTGCTCTGT	8826	False	NA	NA	False	NA	NA	NA	141941633	141929652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
tx.18808	chr7	+	557	5	FSM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	130	5	-19	5	multi-exon	FALSE	canonical	3	973	junction_1	229.96847610053	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTGGTGGACACTTT	NA	False	NA	NA	False	NA	NA	NA	142086878	142094479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094255
tx.18809	chr7	-	1639	3	FSM	ENSMUSG00000009248.7	ENSMUST00000009392.6	1605	3	-31	-3	-31	3	multi-exon	FALSE	canonical	3	20	junction_1	4	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCAGTGCCTTGTACCT	NA	False	NA	NA	False	NA	NA	NA	142523032	142520562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_142521077_142521636_142522437_142522707
tx.1881	chr10	+	2709	5	NIC	ENSMUSG00000061371.8	novel	2360	4	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	14.0423466699836	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	81883931	81900579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350_81897183_81900022
tx.18810	chr7	+	1478	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	49	6	-6	-6	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	5616	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	NA	False	NA	NA	NA	142606524	142621665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
tx.18811	chr7	+	1515	11	FSM	ENSMUSG00000000154.17	ENSMUST00000052348.12	1525	11	10	0	10	0	multi-exon	FALSE	canonical	2	3	junction_2	2.44131112314674	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGGCTTTGCCTAG	866	False	NA	NA	False	NA	NA	NA	143027482	143053071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_143027575_143029806_143030043_143033021_143033120_143033456_143033618_143034126_143034260_143044548_143044662_143045482_143045591_143046578_143046680_143050687_143050790_143051046_143051168_143052821
tx.18812	chr7	-	2289	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	-8	4	4	0	multi-exon	FALSE	canonical	3	502	junction_2	192.287354411741	786	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGGTTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	143102837	143067319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
tx.18813	chr7	-	2253	15	FSM	ENSMUSG00000059119.10	ENSMUST00000208190.2	2259	15	6	0	4	0	multi-exon	FALSE	canonical	3	471	junction_1	167.71624785905	688	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGGTTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	143102837	143067319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
tx.18814	chr7	-	2723	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	23	476	-11	0	multi-exon	TRUE	canonical	3	290	junction_21	336.211639490553	544	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	NA	False	NA	NA	NA	143153804	143111442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
tx.18815	chr7	-	2458	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_20	300.317345380695	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	NA	False	NA	NA	NA	143153806	143111441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140912_143142228_143142321_143153718
tx.18816	chr7	-	2476	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	-13	-1	11	0	multi-exon	FALSE	canonical	3	1234	junction_21	93.4109735380392	1583	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	NA	False	NA	NA	NA	143153806	143111442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
tx.18817	chr7	-	4203	7	FSM	ENSMUSG00000010751.16	ENSMUST00000146692.8	2298	7	8	-1913	-1	-4	multi-exon	FALSE	canonical	3	15	junction_2	62.0232931154811	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTAATCTGGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	143203390	143188548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143192174_143192981_143193027_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
tx.18818	chr7	-	4166	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	7	-3	-2	1	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGCTTGAATTGGCTC	NA	False	NA	NA	False	NA	NA	NA	143203391	143188541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
tx.18819	chr7	-	2633	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	1	7	1	-7	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAATAAGCTTATTGAT	NA	False	NA	NA	False	NA	NA	NA	143376577	143349327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
tx.1882	chr10	+	2326	3	FSM	ENSMUSG00000061371.8	ENSMUST00000209622.2	2284	3	-43	1	-23	1	multi-exon	FALSE	canonical	1	2	junction_2	19	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTATCTATATTATCAA	NA	False	NA	NA	False	NA	NA	NA	81883933	81897419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81884064_81894203_81894331_81895350
tx.18820	chr7	+	2368	8	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	587	0	-21	0	3prime_fragment	TRUE	canonical	3	394	junction_5	16.39686381163	308	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	143383949	143402147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
tx.18821	chr7	+	2557	9	NIC	ENSMUSG00000058454.16	novel	2752	9	NA	NA	-41	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_1	171.596137412822	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	143383929	143402147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_143384003_143387504_143387674_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
tx.18822	chr7	-	3028	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	259	-1	-5	-1	multi-exon	FALSE	canonical	0	0	junction_7	258.149054338875	1504	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTGATCTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	144024487	143989470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
tx.18823	chr7	-	2916	17	FSM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	-4	1	-4	-1	multi-exon	TRUE	canonical	3	340	junction_7	190.956545694956	280	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTGATCTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	144024486	143989470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
tx.18824	chr7	-	5060	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	132	junction_22	23.3465570993897	380	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAGAGTGCTGTGAACA	NA	False	NA	NA	False	NA	NA	NA	144107466	144030495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
tx.18825	chr7	-	1528	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	1	2374	1	-2374	multi-exon	FALSE	canonical	3	26	junction_1	0	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTGGGTGTGATAA	NA	False	NA	NA	False	NA	NA	NA	144136199	144133428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_144134598_144135840
tx.18826	chr7	-	4540	25	NNC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	4	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	7.42637473244292	6	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTCTCCTGGCTGTT	NA	False	NA	NA	False	NA	NA	NA	144232618	144142284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144202311_144202378_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
tx.18827	chr7	-	4488	24	NNC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	6.22756844166744	11	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCTCTCCTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	144232633	144142285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
tx.18828	chr7	-	4601	25	NNC	ENSMUSG00000031075.20	novel	4585	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	7.1820329449413	9	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCTCTCCTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	144292329	144142285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292099
tx.18829	chr7	+	2541	4	FSM	ENSMUSG00000031074.15	ENSMUST00000155320.8	599	4	-225	-1717	-225	0	multi-exon	FALSE	canonical	3	7	junction_1	23.9768406778059	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACCATATGGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	144391594	144398173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_144391847_144392341_144392665_144394407_144394512_144396311
tx.1883	chr10	+	4466	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	-10	-2096	-10	-1068	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCTGATAGAACAAGTTC	NA	False	NA	NA	False	NA	NA	NA	81883946	81899511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
tx.18830	chr7	+	2659	3	FSM	ENSMUSG00000031074.15	ENSMUST00000105898.2	2299	3	-354	-6	158	6	multi-exon	FALSE	canonical	3	54	junction_2	3.5	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATATGGTTGGTGATGTTT	NA	False	NA	NA	False	NA	NA	NA	144391977	144398179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_144392665_144394407_144394512_144396311
tx.18831	chr7	+	3031	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	1	-2	1	2	multi-exon	FALSE	canonical	3	677	junction_2	22.5	1196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTGTCTGCTTTGTC	8003	False	NA	NA	False	NA	NA	NA	144415123	144418982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_144415570_144415968_144416073_144416501
tx.18832	chr7	+	2002	5	FSM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	13	0	13	0	multi-exon	FALSE	canonical	3	87	junction_3	3.69966214673719	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGTCTGGGATCATT	NA	False	NA	NA	False	NA	NA	NA	144468884	144474871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960_144473079_144473346
tx.18833	chr7	-	3095	3	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	2423	48	751	-48	3prime_fragment	FALSE	canonical	3	385	junction_1	12.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144491183	144483715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_144486509_144487752_144487902_144491030
tx.18834	chr7	-	3735	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	4	1	4	-1	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	512	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCACTGTTGTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	144493602	144483668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
tx.18835	chr7	-	3766	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	163.518347594391	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	144493566	144483667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_144486575_144487752_144487902_144491030_144491191_144491623_144491840_144493232
tx.18836	chr7	-	2802	25	FSM	ENSMUSG00000048677.10	ENSMUST00000058022.6	2993	25	56	135	-24	0	multi-exon	FALSE	canonical	3	14	junction_4	4.91860837364933	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCTCTTTCTACTTC	NA	False	NA	NA	False	NA	NA	NA	144837692	144807794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
tx.18837	chr8	+	5372	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_2	81.8694692788466	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	NA	False	NA	NA	NA	3443027	3506601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_3443103_3475294_3475386_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
tx.18838	chr8	+	5304	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	61.0774450483058	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	NA	False	NA	NA	NA	3443028	3506601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
tx.18839	chr8	+	5275	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-4	0	-4	0	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	437	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	NA	False	NA	NA	NA	3443033	3506601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
tx.1884	chr10	+	4039	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	-37	-1276	-37	1276	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAACAGTCCTGGAGTG	NA	False	NA	NA	False	NA	NA	NA	81919149	81948326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
tx.18840	chr8	+	5393	20	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	63.6920830279809	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	NA	False	NA	NA	NA	3443037	3506601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_3443225_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
tx.18841	chr8	+	3040	4	ISM	ENSMUSG00000004568.14	ENSMUST00000238786.2	3794	19	25237	-2062	1179	1	3prime_fragment	FALSE	canonical	3	228	junction_3	26.2466929133727	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGCTGAAACAGACCTT	1397	False	NA	NA	False	NA	NA	NA	3501936	3506602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_3502286_3503037_3503372_3504158_3504285_3504371
tx.18842	chr8	+	2643	3	ISM	ENSMUSG00000004568.14	ENSMUST00000238786.2	3794	19	26385	-2061	2327	0	3prime_fragment	FALSE	canonical	3	228	junction_2	25	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	2545	False	NA	NA	False	NA	NA	NA	3503084	3506601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_3503372_3504158_3504285_3504371
tx.18843	chr8	-	1126	5	FSM	ENSMUSG00000069633.13	ENSMUST00000004686.13	2870	5	32	1712	-3	-1709	multi-exon	FALSE	canonical	3	21	junction_1	4.14578098794425	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGTGCATGAGGTG	NA	False	NA	NA	False	NA	NA	NA	3517648	3508816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517571
tx.18844	chr8	+	1982	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	17	0	-15	0	multi-exon	FALSE	canonical	3	37	junction_1	0	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	6333	False	NA	NA	False	NA	NA	NA	3543154	3547208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_3543310_3545381
tx.18845	chr8	+	2035	14	FSM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	30	0	-8	0	multi-exon	FALSE	canonical	3	278	junction_8	29.619280463035	234	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	NA	False	NA	NA	NA	3550486	3565232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
tx.18846	chr8	+	4110	17	FSM	ENSMUSG00000044433.17	ENSMUST00000057028.15	4450	17	337	3	-164	-3	multi-exon	FALSE	canonical	3	66	junction_7	31.8251448347058	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAAGTTTACGTCTCGT	6490	False	NA	NA	False	NA	NA	NA	3637629	3659072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
tx.18847	chr8	+	4144	18	NIC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-144	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	42.9626859907903	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTACGTCTCGTGTT	6510	False	NA	NA	False	NA	NA	NA	3637649	3659075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
tx.18848	chr8	+	4126	18	FSM	ENSMUSG00000044433.17	ENSMUST00000207077.2	3832	18	-153	-141	-135	-6	multi-exon	FALSE	canonical	3	30	junction_5	41.5373263579742	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACCAAGTTTACGTCT	6519	False	NA	NA	False	NA	NA	NA	3637658	3659069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
tx.18849	chr8	+	4111	17	FSM	ENSMUSG00000044433.17	ENSMUST00000171962.3	3925	17	-167	-19	-167	-8	multi-exon	TRUE	canonical	3	47	junction_7	34.0677174903163	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGACCAAGTTTACGT	6487	False	NA	NA	False	NA	NA	NA	3637626	3659067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
tx.1885	chr10	-	2365	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	-27	-303	-20	303	multi-exon	FALSE	canonical	3	32	junction_1	52.6898683071254	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAACTAGATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	82077134	82060380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
tx.18850	chr8	+	2287	7	ISM	ENSMUSG00000044433.17	ENSMUST00000208064.2	3241	10	1968	-26	1968	-6	3prime_fragment	FALSE	canonical	3	122	junction_1	19.073687518557	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACCAAGTTTACGTCT	5416	False	NA	NA	False	NA	NA	NA	3654050	3659069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
tx.18851	chr8	-	2659	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	18	0	4	0	multi-exon	FALSE	canonical	3	374	junction_12	44.2084358744927	674	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1029	False	NA	NA	False	NA	NA	NA	3671298	3660086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
tx.18852	chr8	+	325	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	5	863	1	0	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5592	False	NA	NA	False	NA	NA	NA	3671555	3673372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
tx.18853	chr8	+	1876	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	183	849	-14	0	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	403	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4570	False	NA	NA	False	NA	NA	NA	3681137	3692795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
tx.18854	chr8	-	377	2	FSM	ENSMUSG00000089665.3	ENSMUST00000159364.3	392	2	17	-2	17	2	multi-exon	FALSE	canonical	3	78	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTCTTTCTATTA	NA	False	NA	NA	False	NA	NA	NA	3722345	3721185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_3721397_3722179
tx.18855	chr8	+	2019	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	192	335	-19	0	multi-exon	FALSE	canonical	3	198	junction_1	0	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGGCTATTATTATTG	NA	False	NA	NA	False	NA	NA	NA	3726490	3730920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_3726604_3729014
tx.18856	chr8	+	1561	11	FSM	ENSMUSG00000011832.17	ENSMUST00000239400.2	1542	11	-19	0	-19	0	multi-exon	FALSE	canonical	3	12	junction_10	5.9464274989274	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCTCCGGATGTAGT	NA	False	NA	NA	False	NA	NA	NA	4216547	4243701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4243548
tx.18857	chr8	+	4104	21	NNC	ENSMUSG00000011832.17	novel	3938	20	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.60143218483576	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGATGCCGAATAGAGA	NA	False	NA	NA	False	NA	NA	NA	4216554	4258047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_4216764_4232379_4232538_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
tx.18858	chr8	+	3940	20	FSM	ENSMUSG00000011832.17	ENSMUST00000176149.9	3938	20	-7	5	-7	0	multi-exon	FALSE	canonical	3	9	junction_12	7.46144290294483	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	NA	False	NA	NA	NA	4216559	4258046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
tx.18859	chr8	+	3419	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110998.9	3497	11	78	0	-11	0	multi-exon	FALSE	canonical	3	271	junction_7	24.9617707705203	517	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	4288817	4297896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
tx.1886	chr10	-	2161	4	FSM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	-28	-9	-28	5	multi-exon	FALSE	canonical	2	18	junction_1	59.275252471462	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTCATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	82077142	82060678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_82062428_82063278_82063426_82063632_82063760_82077004
tx.18860	chr8	+	1526	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	9	1	-5	1	multi-exon	FALSE	canonical	3	110	junction_3	11.3880419739304	125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGATTCCCCCTTTGA	NA	False	NA	NA	False	NA	NA	NA	4303088	4306219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
tx.18861	chr8	-	1783	13	FSM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	7	0	7	0	multi-exon	FALSE	canonical	3	458	junction_5	35.4920765805553	590	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	4325906	4309730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
tx.18862	chr8	-	2507	7	NNC	ENSMUSG00000040028.11	novel	2317	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	192	junction_6	712.072483826065	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	4375080	4338342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
tx.18863	chr8	-	2451	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	331	2961	4	0	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	1717	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	4375082	4338342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
tx.18864	chr8	-	2648	8	NNC	ENSMUSG00000040028.11	novel	2317	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	808.566178680584	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	4375091	4338342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4372702_4372833_4374885
tx.18865	chr8	+	1151	7	NIC	ENSMUSG00000023235.15	novel	867	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	6.71854812358213	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTCTAGTGTGCAGTA	NA	False	NA	NA	False	NA	NA	NA	4375221	4410020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_4375289_4377756_4377851_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
tx.18866	chr8	+	3222	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	128	6125	-122	433	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAAATATTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	4543326	4575555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
tx.18867	chr8	+	3962	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-28	-1570	-28	1570	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTGGCGTTTTCATCT	NA	False	NA	NA	False	NA	NA	NA	4663138	4681801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
tx.18868	chr8	+	3150	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-28	640	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	48	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATTTGACTTATGGT	NA	False	NA	NA	False	NA	NA	NA	4663138	4680871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
tx.18869	chr8	-	2163	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	-7	0	-2	0	multi-exon	TRUE	canonical	3	204	junction_9	39.0672497112351	349	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTGAAATGTGGATT	NA	False	NA	NA	False	NA	NA	NA	4829561	4785975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
tx.1887	chr10	-	433	3	ISM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	-12	2554	-12	-2554	5prime_fragment	FALSE	canonical	3	139	junction_1	4.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCTTAGGGTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	82077126	82063241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_82063426_82063632_82063760_82077004
tx.18870	chr8	-	4834	5	FSM	ENSMUSG00000001300.17	ENSMUST00000001319.15	4793	5	-41	0	-41	0	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTTCAAAGTATTTTCC	NA	False	NA	NA	False	NA	NA	NA	8711283	8667433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_8670977_8672330_8672445_8673147_8673241_8689205_8689490_8710483
tx.18871	chr8	-	3225	2	ISM	ENSMUSG00000040459.12	ENSMUST00000207070.2	525	3	-1504	-773	-1504	0	intron_retention	FALSE	canonical	3	955	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	NA	False	NA	-6	True	NA	NA	NA	8733767	8716575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_8717417_8731383
tx.18872	chr8	-	1707	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	-11	1501	-11	0	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	325	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5244	False	NA	NA	False	NA	NA	NA	8740532	8716575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
tx.18873	chr8	-	3987	3	FSM	ENSMUSG00000040459.12	ENSMUST00000208252.2	3559	3	-428	0	-11	0	multi-exon	FALSE	canonical	3	891	junction_2	32	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5244	False	NA	NA	False	NA	NA	NA	8740532	8716575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_8717417_8731383_8733974_8739976
tx.18874	chr8	-	4085	2	FSM	ENSMUSG00000049717.10	ENSMUST00000095476.6	5028	2	-28	971	-28	857	multi-exon	FALSE	canonical	2	7	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAACTTTATGTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	10026327	10020019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_10023808_10026030
tx.18875	chr8	+	5042	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	26	6	26	-6	multi-exon	FALSE	canonical	3	144	junction_1	0	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGTAGTGAGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	10027742	10042149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_10028020_10037384
tx.18876	chr8	+	5131	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	37	23	27	-23	multi-exon	FALSE	canonical	3	35	junction_1	0	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCATGAGTTTCACTG	NA	False	NA	NA	False	NA	NA	NA	10027743	10042132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_10028020_10032863_10032971_10037384
tx.18877	chr8	-	6794	2	FSM	ENSMUSG00000038894.8	ENSMUST00000040514.8	6323	2	-471	0	-471	0	multi-exon	FALSE	canonical	2	9	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGATTGGAGGACATTTT	NA	False	NA	NA	False	NA	NA	NA	11058929	11034680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_11037015_11054469
tx.18878	chr8	-	6496	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	23	96	23	-88	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTTTTATGGATTTGT	NA	False	NA	NA	False	NA	NA	NA	11362803	11248518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
tx.18879	chr8	-	4888	29	NNC	ENSMUSG00000031502.12	novel	6615	52	NA	NA	4895	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	14.4823960696553	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTTTTATGGATTTGT	4541	False	NA	NA	False	NA	NA	NA	11277544	11248518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11277412
tx.1888	chr10	+	3399	4	FSM	ENSMUSG00000073427.5	ENSMUST00000210381.2	3330	4	-64	-5	-3	5	multi-exon	FALSE	canonical	3	117	junction_3	14.0554457615387	162	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTATGTTGTCATCCA	NA	False	NA	NA	False	NA	NA	NA	82190085	82215475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82212394
tx.18880	chr8	-	4817	29	ISM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	81368	96	981	-88	3prime_fragment	FALSE	canonical	3	49	junction_27	9.04241705090232	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTTTTATGGATTTGT	627	False	NA	NA	False	NA	NA	NA	11281458	11248518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397
tx.18881	chr8	+	6407	48	FSM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	41	2	41	-2	multi-exon	TRUE	canonical	3	15	junction_4	6.83737233737166	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGTTTTCTGTCCCCC	8521	False	NA	NA	False	NA	NA	NA	11362845	11499285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_11363115_11363418_11363508_11363629_11363685_11404276_11404358_11448661_11448797_11449703_11449749_11451147_11451265_11452162_11452235_11452983_11453020_11453341_11453405_11454963_11455000_11456812_11456855_11458051_11458145_11458881_11458918_11459421_11459473_11460054_11460100_11463978_11464033_11464741_11464809_11465363_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
tx.18882	chr8	+	4987	30	ISM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	102595	0	10492	0	3prime_fragment	FALSE	canonical	3	23	junction_4	5.69727807008292	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTCTGTCCCCCGA	783	False	NA	NA	False	NA	NA	NA	11465399	11499287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
tx.18883	chr8	+	1243	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	64	0	2	0	multi-exon	FALSE	canonical	3	162	junction_1	41.4568048294447	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	11547569	11563287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
tx.18884	chr8	+	1329	10	FSM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	30	0	5	0	multi-exon	FALSE	canonical	3	77	junction_1	63.9388210675343	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	11547597	11563287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
tx.18885	chr8	+	3084	3	NIC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	-2184	0	intron_retention	FALSE	canonical	3	252	junction_2	10.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	885	False	NA	NA	False	NA	NA	NA	11557777	11563287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_11560348_11561876_11561998_11562894
tx.18886	chr8	-	1811	15	NIC	ENSMUSG00000056228.11	novel	1902	15	NA	NA	6	4	combination_of_known_junctions	FALSE	canonical	3	153	junction_9	26.6340468006571	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGGGCCTATGCTGC	NA	False	NA	NA	False	NA	NA	NA	11600735	11564016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
tx.18887	chr8	-	1808	15	FSM	ENSMUSG00000056228.11	ENSMUST00000049461.7	1902	15	52	42	10	2	multi-exon	FALSE	canonical	3	35	junction_9	50.1547096288991	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAAAGTGGGCCTATGCT	NA	False	NA	NA	False	NA	NA	NA	11600731	11564018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580428_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
tx.18888	chr8	+	2434	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	380	0	335	0	multi-exon	FALSE	canonical	3	454	junction_1	0	337	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	NA	False	NA	NA	NA	11606445	11613251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_11607046_11611417
tx.18889	chr8	+	1978	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	-6	-1	-6	0	multi-exon	FALSE	canonical	3	111	junction_1	0	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	NA	False	NA	NA	NA	11608422	11613251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_11608567_11611417
tx.1889	chr10	-	558	3	FSM	ENSMUSG00000063320.12	ENSMUST00000185168.8	469	3	-5	-84	-5	-7	multi-exon	FALSE	canonical	3	100	junction_2	174.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGTCTTACTATACA	NA	False	NA	NA	False	NA	NA	NA	82459067	82455691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_82456052_82458541_82458659_82458986
tx.18890	chr8	-	5803	3	ISM	ENSMUSG00000031508.15	ENSMUST00000211690.2	2625	4	1223	-2	1223	0	3prime_fragment	FALSE	canonical	3	454	junction_1	47	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	5338	False	NA	NA	False	NA	NA	NA	11673403	11661582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_11662948_11665814_11665911_11669061
tx.18891	chr8	-	9417	2	ISM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	11607	0	476	0	3prime_fragment	FALSE	canonical	3	548	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	4591	False	NA	NA	False	NA	NA	NA	11674150	11661582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_11665911_11669061
tx.18892	chr8	-	5722	4	ISM	ENSMUSG00000031508.15	ENSMUST00000210530.2	2398	7	11468	0	340	0	3prime_fragment	FALSE	canonical	3	159	junction_3	165.724671267336	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	4455	False	NA	NA	False	NA	NA	NA	11674286	11661582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261
tx.18893	chr8	-	2441	7	FSM	ENSMUSG00000031508.15	ENSMUST00000211174.2	2447	7	7	-1	7	0	multi-exon	FALSE	canonical	3	27	junction_4	195.638626610959	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	NA	False	NA	NA	NA	11685747	11661582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11685410
tx.18894	chr8	-	2395	7	FSM	ENSMUSG00000031508.15	ENSMUST00000210530.2	2398	7	3	0	3	0	multi-exon	FALSE	canonical	3	111	junction_4	160.305350988529	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	NA	False	NA	NA	NA	11685751	11661582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11685410
tx.18895	chr8	-	5312	6	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	27	junction_3	204.957166256757	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	NA	False	NA	NA	NA	11685751	11661582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11685410
tx.18896	chr8	-	5150	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	6	0	3	0	multi-exon	FALSE	canonical	3	209	junction_2	122.541829593001	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	NA	False	NA	NA	NA	11685751	11661582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
tx.18897	chr8	-	2284	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	2	-1	2	0	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	NA	False	NA	NA	NA	11685752	11661582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
tx.18898	chr8	-	7026	6	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	89	junction_3	156.362399572276	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	NA	False	NA	NA	NA	11685752	11661582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11678531_11682865_11683019_11685410
tx.18899	chr8	-	6355	3	ISM	ENSMUSG00000031508.15	ENSMUST00000211445.2	1767	6	12986	-3382	2576	2	3prime_fragment	FALSE	canonical	3	159	junction_2	194.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTCTGAAACTGCTTT	6691	False	NA	NA	False	NA	NA	NA	11672050	11661580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_11665911_11669061_11669298_11670261
tx.189	chr1	+	1494	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	65	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCCTTTTCCTTAAGG	NA	False	NA	NA	False	NA	NA	NA	37911277	37915309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_37911407_37913944
tx.1890	chr10	-	695	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	13	8	7	-8	multi-exon	FALSE	canonical	3	302	junction_2	73.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGATAGTCTTACTATAC	NA	False	NA	NA	False	NA	NA	NA	82459017	82455692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_82456052_82458541_82458659_82458798
tx.18900	chr8	-	773	6	NNC	ENSMUSG00000031509.11	novel	1263	6	NA	NA	-3534	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	15.5897402159241	17	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTGATAGGGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	11716138	11705477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_11705682_11706108_11706190_11711671_11711756_11712589_11712692_11715035_11715099_11715899
tx.18901	chr8	+	4895	21	NIC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	170	-5	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	19.8655480669424	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTGTTGCTTCATCT	NA	False	NA	NA	False	NA	NA	NA	11777890	11885214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
tx.18902	chr8	+	4447	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	-1	5	-1	-5	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTGTTGCTTCATCT	9627	False	NA	NA	False	NA	NA	NA	11808352	11885214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
tx.18903	chr8	+	4214	19	NIC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	24.1689654079129	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9640	False	NA	NA	False	NA	NA	NA	11808365	11885219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
tx.18904	chr8	-	3772	23	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_19	48.7379779624449	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	12722116	12664278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12708479_12708589_12711299_12711368_12713931_12714040_12721954
tx.18905	chr8	-	3663	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	132	2	7	0	multi-exon	FALSE	canonical	3	142	junction_11	12.9206544206397	317	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	12722116	12664278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
tx.18906	chr8	-	4847	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	35.7078089365284	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	12722116	12664278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
tx.18907	chr8	+	3925	29	NIC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_28	12.9998037661798	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGATGTGCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	12807018	12912205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911911
tx.18908	chr8	+	7493	30	FSM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	-5	61	-5	0	multi-exon	FALSE	canonical	3	17	junction_29	16.4441186100344	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGGACTGAGAGCCCAGT	NA	False	NA	NA	False	NA	NA	NA	12807008	12918667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
tx.18909	chr8	+	7522	30	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_29	16.6168259924755	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	NA	False	NA	NA	NA	12807021	12918728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
tx.1891	chr10	-	590	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	-16	-168	-10	-7	multi-exon	FALSE	canonical	3	187	junction_2	131	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGTCTTACTATACA	NA	False	NA	NA	False	NA	NA	NA	82459040	82455691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_82456052_82458541_82458659_82458927
tx.18910	chr8	+	3376	26	NIC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_25	17.1588344592516	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAAATGTGACCTCTTC	NA	False	NA	NA	False	NA	NA	NA	12807031	12901726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12901632
tx.18911	chr8	+	7470	29	FSM	ENSMUSG00000031441.16	ENSMUST00000091237.12	7443	29	-27	0	-25	0	multi-exon	FALSE	canonical	3	7	junction_28	15.8999983955846	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	NA	False	NA	NA	NA	12806988	12918728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12914919
tx.18912	chr8	+	5284	30	FSM	ENSMUSG00000031442.22	ENSMUST00000095456.10	3926	30	91	-1449	-30	1	multi-exon	FALSE	canonical	3	19	junction_2	5.78098074781942	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTAGCATTTCTGGTTA	7995	False	NA	NA	False	NA	NA	NA	12923917	13070502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
tx.18913	chr8	-	2250	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	84.1979915149282	346	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATTTGTGTTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	13154844	13127188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147600_13147669_13148562_13148637_13150324_13150415_13154774
tx.18914	chr8	+	3621	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.5342344512295	592	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACTTTACTAATACAT	NA	False	NA	NA	False	NA	NA	NA	13155724	13197937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
tx.18915	chr8	+	3685	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-26	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	113.293236076653	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTACTTTACTAATACA	NA	False	NA	NA	False	NA	NA	NA	13155713	13197936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183296_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
tx.18916	chr8	+	3435	18	NIC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	84.9753475343368	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTACTTTACTAATAC	NA	False	NA	NA	False	NA	NA	NA	13155734	13197935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_13155904_13156193_13156310_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
tx.18917	chr8	+	2141	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	81	7	81	-7	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	3188	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTGGACGTGTCCTT	8283	False	NA	NA	False	NA	NA	NA	13209241	13225331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
tx.18918	chr8	-	1613	8	NIC	ENSMUSG00000038515.11	novel	1408	7	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	134.762678779537	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTCTGTGCTCATGGT	3648	False	NA	NA	False	NA	NA	NA	13250609	13222020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_13222613_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
tx.18919	chr8	-	1263	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	7	1743	4	17	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCTTTGGAGTCATAAAC	3644	False	NA	NA	False	NA	NA	NA	13250613	13226904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
tx.1892	chr10	+	2990	10	NIC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	-9	-43	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	344.226023937115	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCAGTCTGAGCGTTT	NA	False	NA	NA	False	NA	NA	NA	82465683	82486115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484414
tx.18920	chr8	-	2957	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110838.8	2955	6	0	-2	0	1	multi-exon	FALSE	canonical	3	14	junction_2	13.5558105622644	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGATGTCCTTTATTCTT	NA	False	NA	NA	False	NA	NA	NA	13338131	13305961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_13307977_13308946_13309044_13321589_13321721_13328516_13328686_13330908_13331126_13337803
tx.18921	chr8	-	3017	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	-268	-1	15	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	13338109	13305962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
tx.18922	chr8	-	2859	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	-6	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	12.0701077045733	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	13338131	13305962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
tx.18923	chr8	+	3118	13	FSM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	-308	1525	-287	3	multi-exon	TRUE	canonical	3	15	junction_7	13.4873912311545	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTTTTAATTTGATTT	NA	False	NA	NA	False	NA	NA	NA	13337902	13371399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
tx.18924	chr8	+	3090	13	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-266	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_7	12.8344155387856	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTAGTTTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	13337923	13371395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
tx.18925	chr8	+	2516	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	-8	3	-8	-3	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	654	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2095	False	NA	NA	False	NA	NA	NA	13388742	13428445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
tx.18926	chr8	+	2448	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	-24	-3	-7	-3	multi-exon	FALSE	canonical	3	161	junction_2	290.39449030586	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2096	False	NA	NA	False	NA	NA	NA	13388743	13428445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
tx.18927	chr8	+	2573	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	502	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2152	False	NA	NA	False	NA	NA	NA	13388799	13428445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
tx.18928	chr8	+	2508	11	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	161	junction_2	301.20167662216	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2150	False	NA	NA	False	NA	NA	NA	13388797	13428445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_13388921_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
tx.18929	chr8	+	2787	12	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	274.517427828942	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2164	False	NA	NA	False	NA	NA	NA	13388811	13428445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
tx.1893	chr10	+	2985	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	-1	518	-1	-43	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	641	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCAGTCTGAGCGTTT	NA	False	NA	NA	False	NA	NA	NA	82465691	82486115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
tx.18930	chr8	+	3301	11	FSM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	-858	-743	-5	-3	multi-exon	FALSE	canonical	3	905	junction_5	61.5983766019852	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2168	False	NA	NA	False	NA	NA	NA	13388815	13428445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
tx.18931	chr8	-	2593	15	FSM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	-45	0	-45	0	multi-exon	FALSE	canonical	3	43	junction_8	9.27719389312373	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTGGTCACTGTCT	5715	False	NA	NA	False	NA	NA	NA	13544535	13515373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_13515901_13516626_13516856_13518191_13518365_13520218_13520388_13521448_13521614_13524656_13524847_13525038_13525158_13526111_13526234_13527043_13527167_13528251_13528375_13529006_13529130_13533673_13533737_13535670_13535696_13543845_13544013_13544260
tx.18932	chr8	-	4152	24	FSM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	-18	270	-18	-268	multi-exon	FALSE	canonical	3	46	junction_3	7.20402114134286	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGAGTGGTTTGGATT	NA	False	NA	NA	False	NA	NA	NA	13727621	13617217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
tx.18933	chr8	-	3198	21	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	-18	9529	-18	993	5prime_fragment	FALSE	canonical	3	48	junction_6	6.62947961758689	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCACCGTTTTGTCTC	NA	False	NA	NA	False	NA	NA	NA	13727621	13626476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
tx.18934	chr8	+	2291	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	5	5	4	-5	multi-exon	FALSE	canonical	3	559	junction_10	60.600055957127	869	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTTTCCAAGCTGGTA	NA	False	NA	NA	False	NA	NA	NA	13807680	13831933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
tx.18935	chr8	+	1560	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	25	472	5	-472	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCAGGTTTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	13835639	13848721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
tx.18936	chr8	+	3971	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	40	2	-23	-2	multi-exon	FALSE	canonical	3	209	junction_1	0	473	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCATGTGTACTTAAT	NA	False	NA	NA	False	NA	NA	NA	13919680	13931637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13919812_13927797
tx.18937	chr8	-	1117	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-5	-319	-5	319	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATATGAGTACACTGTT	NA	False	NA	NA	False	NA	NA	NA	13940273	13934474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
tx.18938	chr8	+	2043	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	-31	0	-31	0	multi-exon	FALSE	canonical	3	86	junction_9	11.3572731903828	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTCTGCAACAAT	NA	False	NA	NA	False	NA	NA	NA	13957771	13990522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
tx.18939	chr8	+	2067	11	NIC	ENSMUSG00000038365.9	novel	2035	11	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	39.2779836549688	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTTTCTGCAACAA	NA	False	NA	NA	False	NA	NA	NA	13957773	13990521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13988921_13988949_13989562
tx.1894	chr10	+	4103	13	NIC	ENSMUSG00000020246.14	novel	3422	15	NA	NA	-92	-3	intron_retention	FALSE	canonical	0	0	junction_12	25.2729543627614	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGCCCAAATTGTATTT	NA	False	NA	NA	False	NA	NA	NA	82534952	82577226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574813
tx.18940	chr8	-	2580	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	-118	1	-118	-1	multi-exon	FALSE	canonical	3	271	junction_2	12.5	381	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTAGTGTGTATATTT	4662	False	NA	NA	False	NA	NA	NA	14024895	14002008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_14004136_14005719_14005818_14024540
tx.18941	chr8	-	2566	3	NNC	ENSMUSG00000050052.13	novel	2463	3	NA	NA	-80	-1	intron_retention	TRUE	canonical	3	30	junction_2	133	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTAGTGTGTATATTT	4700	False	NA	NA	False	NA	NA	NA	14024857	14002008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_14004136_14005719_14005818_14024516
tx.18942	chr8	-	2475	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	26	-2	intron_retention	FALSE	canonical	3	23	junction_3	123.22427610752	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGTGTATATT	4551	False	NA	NA	False	NA	NA	NA	14025006	14002009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14024944
tx.18943	chr8	-	2478	4	FSM	ENSMUSG00000050052.13	ENSMUST00000145695.2	373	4	0	-2105	0	0	multi-exon	FALSE	canonical	3	28	junction_3	120.875509880575	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4525	False	NA	NA	False	NA	NA	NA	14025032	14002007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_14004136_14005719_14005818_14024540_14024730_14024969
tx.18944	chr8	-	1624	6	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	79.7696684210233	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGATAAGATTATAAAT	NA	False	NA	NA	False	NA	NA	NA	14140298	14077554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
tx.18945	chr8	-	1583	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-22	-4	-22	4	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGTGATAAGATTATAA	NA	False	NA	NA	False	NA	NA	NA	14140323	14077556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
tx.18946	chr8	+	2465	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	-150	2880	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	81.7897032367495	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	NA	False	NA	NA	NA	14938853	14947939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_14939119_14940491_14940624_14944571_14945231_14946530
tx.18947	chr8	+	2333	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	743	3781	-150	2880	multi-exon	FALSE	canonical	3	162	junction_1	24.5	240	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	NA	False	NA	NA	NA	14938853	14947939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_14939119_14944571_14945231_14946530
tx.18948	chr8	+	5502	29	FSM	ENSMUSG00000071176.11	ENSMUST00000084207.12	5528	29	19	7	19	4	multi-exon	TRUE	canonical	3	14	junction_9	8.00541908296359	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTATTTCAAGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	14961681	15051078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
tx.18949	chr8	+	5384	28	FSM	ENSMUSG00000071176.11	ENSMUST00000110800.9	5336	28	-55	7	20	4	multi-exon	FALSE	canonical	3	16	junction_8	7.20558387346064	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTATTTCAAGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	14961682	15051078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
tx.1895	chr10	+	4284	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	113	1040	-91	-7	intron_retention	FALSE	canonical	3	69	junction_7	9.81666256450355	108	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAATTGCCCAAATTGT	NA	False	NA	NA	False	NA	NA	NA	82534953	82577222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
tx.18950	chr8	+	4398	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_12	46.4396262785231	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	NA	NA	NA	18645172	18853205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
tx.18951	chr8	+	4637	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	25	0	-8	0	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	314	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	NA	NA	NA	18645171	18853205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
tx.18952	chr8	+	2496	8	FSM	ENSMUSG00000039842.16	ENSMUST00000146819.8	2067	8	-426	-3	-8	3	multi-exon	FALSE	canonical	3	150	junction_4	14.4391757354209	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGACCTGTATACCTTT	NA	False	NA	NA	False	NA	NA	NA	18645171	18682920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531
tx.18953	chr8	+	4518	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	45.9480382848084	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGCAATAATTTTA	NA	False	NA	NA	False	NA	NA	NA	18645172	18853202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
tx.18954	chr8	-	2328	3	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATCTATTCTGAGTTT	6105	False	NA	NA	False	NA	NA	NA	18896167	18889595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_18891541_18892796_18892933_18895920
tx.18955	chr8	+	4688	7	NIC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	12	-13	intron_retention	FALSE	canonical	3	636	junction_4	36.4783040541452	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAGGGAAAATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	18896306	18933424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18928185_18929620_18929745_18931753
tx.18956	chr8	+	2820	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	15	7944	13	-4	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	613	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTGCTTCTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	18896307	18933433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
tx.18957	chr8	-	2942	7	NNC	ENSMUSG00000039814.16	novel	3176	7	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	13.7204227340122	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	NA	False	NA	NA	NA	19000988	18982744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000784
tx.18958	chr8	-	2838	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	7.05730511991338	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	NA	False	NA	NA	NA	19000991	18982744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
tx.18959	chr8	+	4425	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-24	-573	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	469	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCTTTTTAAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	19834737	20045315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
tx.1896	chr10	-	2857	8	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	166	-33	combination_of_known_junctions	FALSE	canonical	3	60	junction_7	291.808505841815	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	NA	False	NA	NA	NA	82599769	82584567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599292
tx.18960	chr8	+	4129	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-25	-703	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	518	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAGCTTCCAGAGCATT	NA	False	NA	NA	False	NA	NA	NA	19834736	20045185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
tx.18961	chr8	+	4325	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	7	10370	7	-760	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	275	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	NA	NA	NA	20016472	20045128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
tx.18962	chr8	+	4339	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	18	-568	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	253	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTTAAGCAGGGGGTAA	NA	False	NA	NA	False	NA	NA	NA	20016483	20045320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
tx.18963	chr8	+	4855	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-8	-177	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	574.067940230074	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	20016457	20045711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_20016689_20030550_20030856_20035860_20036160_20039783_20039904_20041811
tx.18964	chr8	+	4748	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-91	-11	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	337.871647227168	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	7097	False	NA	NA	False	NA	NA	NA	20143756	20172983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_20143957_20157802_20158009_20163109_20163409_20167037_20167158_20169060
tx.18965	chr8	+	4302	2	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21084	-3725	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCTTGAATATAGTGT	5305	False	NA	NA	False	NA	NA	NA	20555615	20580612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_20555835_20576529
tx.18966	chr8	+	4714	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-226	multi-exon	FALSE	canonical	3	434	junction_2	317.198183317622	481	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	20697891	20727040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149
tx.18967	chr8	+	6247	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-602	intron_retention	FALSE	canonical	3	434	junction_2	283.832109999321	16	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCTTTTTAAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	20697891	20726664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120
tx.18968	chr8	+	4891	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-103	-226	multi-exon	FALSE	canonical	3	200	junction_2	399.990234255788	182	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	20697881	20727040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120_20721241_20723149
tx.18969	chr8	+	4199	3	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	5154	-278	at_least_one_novel_splicesite	FALSE	canonical	3	1117	junction_1	42	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGAGAAATTTGCTGG	NA	False	NA	NA	False	NA	NA	NA	20717256	20726988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_20717497_20721120_20721241_20723149
tx.1897	chr10	-	2381	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	9	-33	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	324.615884118788	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	NA	False	NA	NA	NA	82599969	82584567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599837
tx.18970	chr8	+	4647	2	ISM	ENSMUSG00000096401.3	ENSMUST00000096485.6	930	5	8382	226	8382	-226	internal_fragment	FALSE	canonical	3	1201	junction_1	0	31	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	20720484	20727040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_20721241_20723149
tx.18971	chr8	+	4727	5	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17364	-185	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	210.10771047251	18	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTAGATGTCTTTTTC	5848	False	NA	NA	False	NA	NA	NA	21090248	21122602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_21090445_21107448_21107655_21112754_21113054_21116684_21116805_21118696
tx.18972	chr8	+	4879	5	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17364	-200	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	217.448125997903	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	5848	False	NA	NA	False	NA	NA	NA	21090248	21122587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_21090445_21107448_21107822_21112754_21113054_21116684_21116805_21118696
tx.18973	chr8	+	7276	2	NIC	ENSMUSG00000095403.9	novel	955	5	NA	NA	5236	-771	intron_retention	FALSE	canonical	3	607	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATGTACGTGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	21112848	21122016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_21116805_21118696
tx.18974	chr8	-	6550	21	FSM	ENSMUSG00000006567.12	ENSMUST00000006742.11	6505	21	-42	-3	-42	3	multi-exon	FALSE	canonical	1	1	junction_18	3.94810080924994	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTTTTTTTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	22550363	22482797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22503391_22503626_22504528_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312_22512571_22517545_22518753_22549987
tx.18975	chr8	+	4963	4	FSM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	-5	2	-5	-2	multi-exon	FALSE	canonical	3	45	junction_2	9.93310961716756	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCTGGCTCCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	22550731	22561641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_22550787_22551901_22552133_22555015_22555948_22557896
tx.18976	chr8	-	2030	16	FSM	ENSMUSG00000031478.17	ENSMUST00000033865.16	2021	16	-11	2	-11	1	multi-exon	FALSE	canonical	3	19	junction_15	6.34350061086148	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTGTGTGCTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	22656439	22618300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
tx.18977	chr8	-	2292	9	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	308	-2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	79.0283770236995	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCATTGATTGACTTA	NA	False	NA	NA	False	NA	NA	NA	22675527	22658462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675405
tx.18978	chr8	-	2302	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	6	285	6	0	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATTGATTGACTTATT	NA	False	NA	NA	False	NA	NA	NA	22675829	22658460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
tx.18979	chr8	+	3548	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	19	7	19	-7	multi-exon	TRUE	canonical	3	316	junction_5	36.370219952707	308	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATGTGGGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	22682843	22710852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
tx.1898	chr10	-	2526	8	NNC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	10	-33	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	315.938446601259	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	NA	False	NA	NA	NA	82599968	82584567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588454_82590798_82590930_82592535_82592630_82597666_82597748_82599837
tx.18980	chr8	+	2814	4	FSM	ENSMUSG00000031480.16	ENSMUST00000160585.2	3276	4	-13	475	-13	-473	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGCATTTTGAACA	NA	False	NA	NA	False	NA	NA	NA	22717347	22749920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_22717446_22728470_22728614_22733012_22733973_22748307
tx.18981	chr8	-	3637	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	222	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	86.8192566965033	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTCTGGTCGTAGTGT	NA	False	NA	NA	False	NA	NA	NA	22888338	22865566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22887973
tx.18982	chr8	-	3426	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	4	0	4	0	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	426	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTCTGGTCGTAGTGT	NA	False	NA	NA	False	NA	NA	NA	22888609	22865566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
tx.18983	chr8	-	3284	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	87.5893194909567	36	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGGTCGTAGTGTC	NA	False	NA	NA	False	NA	NA	NA	22888609	22865565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879972_22880089_22885728_22885844_22888455
tx.18984	chr8	+	1293	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	37	185	0	-185	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	362	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTGTGTTGATCATTG	NA	False	NA	NA	False	NA	NA	NA	22901413	22919496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
tx.18985	chr8	-	1373	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	27	2	0	-2	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGCCTTGCATCATTT	NA	False	NA	NA	False	NA	NA	NA	22966871	22952632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
tx.18986	chr8	+	3626	11	FSM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-60	0	-60	0	multi-exon	FALSE	canonical	3	459	junction_6	45.0493063209635	1237	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	22966743	23059628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
tx.18987	chr8	+	5861	2	FSM	ENSMUSG00000097042.3	ENSMUST00000180411.3	2311	2	-3550	0	-3550	0	multi-exon	FALSE	canonical	3	14	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTCAGTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	22966756	22973348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_22972071_22972801
tx.18988	chr8	-	1357	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	-5	2	-5	-2	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	1183	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTCATCTGACTTCTT	NA	False	NA	NA	False	NA	NA	NA	23083779	23067103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
tx.18989	chr8	-	1218	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	-21	4	-4	-4	multi-exon	FALSE	canonical	3	173	junction_8	16.1157058899497	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTCTTAACAAATGT	NA	False	NA	NA	False	NA	NA	NA	23143455	23118145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
tx.1899	chr10	-	2517	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	4	33	4	-33	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	466	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	NA	False	NA	NA	NA	82599974	82584567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
tx.18990	chr8	-	4506	21	FSM	ENSMUSG00000031537.16	ENSMUST00000063401.10	3977	21	27	-556	1	0	multi-exon	FALSE	canonical	3	51	junction_9	16.2802794816305	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	NA	False	NA	NA	NA	23196578	23149227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
tx.18991	chr8	-	3564	22	FSM	ENSMUSG00000031537.16	ENSMUST00000033939.13	3580	22	16	0	1	0	multi-exon	FALSE	canonical	3	43	junction_1	18.670796433355	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	NA	False	NA	NA	NA	23196578	23149227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
tx.18992	chr8	-	3408	9	FSM	ENSMUSG00000031539.7	ENSMUST00000210656.2	3373	9	-34	-1	-34	1	multi-exon	FALSE	canonical	3	19	junction_1	1.96452920568771	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTCTGGTTACTGAGA	NA	False	NA	NA	False	NA	NA	NA	23295672	23277368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295591
tx.18993	chr8	-	3082	13	NNC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	-14	-2468	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	68.2336671543699	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	23698376	23663748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_23664677_23665355_23665436_23665523_23665671_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
tx.18994	chr8	-	3080	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-30	2468	-30	-2468	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	497	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	23698392	23663748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
tx.18995	chr8	-	3003	12	ISM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	16653	2468	-755	-2468	3prime_fragment	FALSE	canonical	3	189	junction_11	21.3150317502085	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	23681709	23663748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731
tx.18996	chr8	-	1354	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	-8	3	-8	-3	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTCAAATGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	23727683	23716634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
tx.18997	chr8	-	1951	5	FSM	ENSMUSG00000015341.18	ENSMUST00000121783.7	1945	5	1	-7	1	0	multi-exon	TRUE	canonical	3	1223	junction_2	41.2946727799119	277	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	NA	False	NA	NA	NA	23747036	23731361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689
tx.18998	chr8	-	1791	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	1	0	1	0	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	962	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	NA	False	NA	NA	NA	23747089	23731361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
tx.18999	chr8	+	4373	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-4	3	-4	-3	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	1511	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCGTGAGTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	23901513	23939645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_23902345_23907345_23907424_23936181
tx.19	chr1	-	1951	3	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	1	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTCTTTTTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	9615429	9613134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_9614799_9615067_9615264_9615338
tx.190	chr1	-	1206	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	25	0	21	0	multi-exon	FALSE	canonical	3	173	junction_5	18.2543754267908	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	NA	False	NA	NA	NA	37929467	37917968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
tx.1900	chr10	-	2808	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	3	-33	intron_retention	FALSE	canonical	3	756	junction_3	68.4505092911822	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	NA	False	NA	NA	NA	82599975	82584567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
tx.19000	chr8	+	3477	2	NNC	ENSMUSG00000037492.17	novel	4182	7	NA	NA	115428	12	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTAATGTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	24534496	24553133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_24534602_24549761
tx.19001	chr8	+	1232	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	49	0	1	0	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	177	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGAGTATTTC	NA	False	NA	NA	False	NA	NA	NA	25507275	25513276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
tx.19002	chr8	-	3270	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	200	-7	-14	7	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	5811	False	NA	NA	False	NA	NA	NA	25591801	25530848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
tx.19003	chr8	-	3487	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	0	1689	0	7	multi-exon	FALSE	canonical	3	27	junction_11	35.6008635794598	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	9688	False	NA	NA	False	NA	NA	NA	25592392	25530848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
tx.19004	chr8	-	4914	12	NIC	ENSMUSG00000031557.17	novel	5176	12	NA	NA	-22	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	41.1584320513503	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATCTGGTTGTGTGTTT	8153	False	NA	NA	False	NA	NA	NA	25581384	25529164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25581298
tx.19005	chr8	-	7473	13	NIC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	2	0	combination_of_known_splicesites	TRUE	canonical	3	6	junction_12	23.0523257443196	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTGTGTTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	25730915	25644567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25730809
tx.19006	chr8	-	7817	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	-31	2	-31	-2	multi-exon	FALSE	canonical	0	0	junction_12	24.1986856851542	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCGGGGTGTGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	25691589	25644569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
tx.19007	chr8	-	6250	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	20.3492014585339	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCGGGGTGTGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	25730918	25644569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
tx.19008	chr8	-	6583	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	-115	3	-22	-3	multi-exon	FALSE	canonical	0	0	junction_10	23.6550206087418	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCGGGGTGTGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	25691580	25644570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
tx.19009	chr8	-	5140	3	ISM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	-52	23828	-52	4142	5prime_fragment	FALSE	canonical	0	0	junction_2	16.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTCCAGCGTGGTAA	NA	False	NA	NA	False	NA	NA	NA	25691610	25668395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_25672947_25690106_25690223_25691137
tx.1901	chr10	+	3374	15	Fusion	ENSMUSG00000020250.12_ENSMUSG00000056821.14	novel	894	3	NA	NA	-65	0	multi-exon	FALSE	canonical	1	47	junction_2	264.185193238627	60	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	NA	False	NA	NA	NA	82647891	82733546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr10_+_82647970_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
tx.19010	chr8	+	4069	18	NIC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	55.8011174250333	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	NA	False	NA	NA	NA	26008785	26064801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
tx.19011	chr8	+	4084	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-5	6	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	52.4816659369305	91	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGGCGTGTGAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	26008782	26064807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
tx.19012	chr8	-	2113	11	FSM	ENSMUSG00000037363.10	ENSMUST00000079160.8	2126	11	21	-8	-4	8	multi-exon	TRUE	canonical	0	0	junction_10	4	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAATGGCTTCCTGTTTGTG	2370	False	NA	NA	False	NA	NA	NA	26087508	26068497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_26068821_26069735_26069811_26070331_26070425_26071688_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084183_26086377_26086462_26087135
tx.19013	chr8	+	3694	10	FSM	ENSMUSG00000054823.18	ENSMUST00000146919.8	3652	10	-43	1	-43	-1	multi-exon	FALSE	canonical	3	19	junction_9	30.118285328204	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCCTTTTTTTTCCC	9642	False	NA	NA	False	NA	NA	NA	26092256	26167987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26166718
tx.19014	chr8	+	3847	8	FSM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	-35	6	-35	-6	multi-exon	FALSE	canonical	3	91	junction_5	11.0435131943358	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATCCTTACATATTTA	9650	False	NA	NA	False	NA	NA	NA	26092264	26164926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349
tx.19015	chr8	+	9599	24	FSM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	-35	541	-35	-541	multi-exon	FALSE	canonical	3	27	junction_15	30.6634885068579	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCTTGTGTTCTTTG	9650	False	NA	NA	False	NA	NA	NA	26092264	26209153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
tx.19016	chr8	+	2520	6	FSM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	-102	-2	-67	2	multi-exon	FALSE	canonical	3	91	junction_5	11.4960862905599	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTGCCTGCTGATTTG	9618	False	NA	NA	False	NA	NA	NA	26092232	26153617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756
tx.19017	chr8	+	9986	23	FSM	ENSMUSG00000054823.18	ENSMUST00000139966.8	5261	23	-34	-4691	-34	-6	multi-exon	FALSE	canonical	2	6	junction_14	32.1331488683936	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGAATATGGGCTGGT	9651	False	NA	NA	False	NA	NA	NA	26092265	26209688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
tx.19018	chr8	+	9553	24	NIC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-25	-544	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	32.8076827186655	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCACCTTGTGTTCT	9660	False	NA	NA	False	NA	NA	NA	26092274	26209150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196636_26199089_26199232_26200699_26200807_26203384_26203587_26204185
tx.19019	chr8	+	2083	6	NIC	ENSMUSG00000031570.18	novel	1483	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	21	junction_2	21.0047613649858	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATACTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	26210063	26214911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_26210179_26210293_26210363_26210581_26210673_26211200_26211265_26211688_26212628_26214106
tx.1902	chr10	+	3405	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	-1	-1107	-1	0	multi-exon	TRUE	canonical	1	267	junction_3	142.059218034492	1041	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	NA	False	NA	NA	NA	82695039	82733546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
tx.19020	chr8	+	2125	6	FSM	ENSMUSG00000031570.18	ENSMUST00000133117.8	2099	6	-26	0	1	0	multi-exon	FALSE	canonical	3	39	junction_2	15.0545674132471	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	26210064	26214914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26212628_26214106
tx.19021	chr8	+	1431	7	FSM	ENSMUSG00000031570.18	ENSMUST00000124764.8	1419	7	-12	0	-12	0	multi-exon	FALSE	canonical	3	21	junction_2	20.3141986469235	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	26210075	26214914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26210179_26210293_26210363_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
tx.19022	chr8	+	1451	7	FSM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	30	2	3	-2	multi-exon	FALSE	canonical	3	39	junction_2	15.9269164205337	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGTGTGTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	26210093	26214912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
tx.19023	chr8	-	4374	18	FSM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	-130	2	3	-2	multi-exon	FALSE	canonical	3	20	junction_17	11.1150012413475	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTGGCCTTATCTA	NA	False	NA	NA	False	NA	NA	NA	26244438	26215374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
tx.19024	chr8	-	4287	18	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	1	18	junction_17	11.4631952042464	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGGCCTTATCTAT	NA	False	NA	NA	False	NA	NA	NA	26244431	26215373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
tx.19025	chr8	-	4794	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	81	1	-8	-1	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	710	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTTTTCTCTCTAGC	NA	False	NA	NA	False	NA	NA	NA	26275234	26254566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
tx.19026	chr8	+	1206	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	14	1443	14	408	multi-exon	FALSE	canonical	3	365	junction_2	35.9660333586504	217	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGAGTTTCTGGTGG	8454	False	NA	NA	False	NA	NA	NA	26275329	26292560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
tx.19027	chr8	-	2327	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	9	1	9	-1	multi-exon	TRUE	canonical	3	3119	junction_12	186.058007680998	3615	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	NA	False	NA	NA	NA	26337713	26306904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
tx.19028	chr8	-	2686	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	7	1	7	-1	multi-exon	TRUE	canonical	3	85	junction_10	15.0390495171943	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCGTTACAGCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	26466774	26434481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
tx.19029	chr8	-	2742	4	ISM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	4392	824	4392	-824	3prime_fragment	FALSE	canonical	3	90	junction_3	13.8884444373331	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTGTGGTGCTGGCA	NA	False	NA	NA	False	NA	NA	NA	26479769	26471455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677
tx.1903	chr10	+	3500	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	9	119670	9	-119670	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTATTTGGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	83196093	83204699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
tx.19030	chr8	-	2782	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	10	821	10	-821	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	NA	NA	NA	26484151	26471452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
tx.19031	chr8	-	2969	6	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	1	-821	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	45.3431361950185	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	NA	NA	NA	26484160	26471452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479372_26479677_26479770_26484114
tx.19032	chr8	-	3264	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	10	-823	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	38.9711431702997	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTGTGGTGCTGGCAT	NA	False	NA	NA	False	NA	NA	NA	26484151	26471454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479770_26484114
tx.19033	chr8	-	1638	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	46	246	46	152	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	804	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCATAGTGTTTGATGT	NA	False	NA	NA	False	NA	NA	NA	26505632	26488995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
tx.19034	chr8	-	5032	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	7	7797	7	2434	multi-exon	FALSE	canonical	3	25	junction_6	10.5632744184703	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAGCATCCGTCTATA	NA	False	NA	NA	False	NA	NA	NA	26609245	26519245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
tx.19035	chr8	-	3006	16	ISM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	-16	25671	-16	-9003	5prime_fragment	FALSE	canonical	3	40	junction_13	7.13489079570715	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTTTGTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	26609268	26537119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
tx.19036	chr8	+	3857	7	FSM	ENSMUSG00000013878.19	ENSMUST00000124757.8	1297	7	-12	-2548	0	2	multi-exon	FALSE	canonical	2	7	junction_5	26.5685695679856	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATGTGTTATGTTTCT	NA	False	NA	NA	False	NA	NA	NA	26609395	26633901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26629007_26629119_26630838
tx.19037	chr8	+	3901	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	31	-3	11	3	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	26609426	26633902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
tx.19038	chr8	+	4015	8	NIC	ENSMUSG00000013878.19	novel	741	5	NA	NA	-20	3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	26.1799112890407	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	26609671	26633902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_26609988_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
tx.1904	chr10	-	6002	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	25	0	25	0	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTCTCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	83369979	83323313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
tx.19040	chr8	+	2227	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	67	1	-25	-1	multi-exon	FALSE	canonical	3	177	junction_1	13	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGCCCTGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	26648235	26654178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_26648550_26650802_26650999_26652461
tx.19041	chr8	+	3387	2	FSM	ENSMUSG00000085795.9	ENSMUST00000154256.3	3152	2	-234	-1	-205	1	multi-exon	FALSE	canonical	2	5	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGGTGTGTTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	27467147	27471490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_27467640_27468595
tx.19042	chr8	+	3919	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	21	898	13	-898	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	445	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAAATTTACCAGTAGAT	NA	False	NA	NA	False	NA	NA	NA	27513847	27529458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
tx.19043	chr8	+	4109	12	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	-10	-896	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.8177534496809	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTACCAGTAGATTG	NA	False	NA	NA	False	NA	NA	NA	27513918	27529460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
tx.19044	chr8	+	2019	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	20	1564	14	1	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGATGAGTGAATT	NA	False	NA	NA	False	NA	NA	NA	27532602	27544596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
tx.19045	chr8	+	2037	8	ISM	ENSMUSG00000031486.16	ENSMUST00000178514.8	5129	16	-59	10410	-59	-8598	5prime_fragment	FALSE	canonical	3	17	junction_4	4.03049599419025	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATTGTGGCAATTAGTG	NA	False	NA	NA	False	NA	NA	NA	27575551	27603053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370
tx.19046	chr8	-	1898	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	7	-6	7	6	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGCTTTTAAAATGTGT	NA	False	NA	NA	False	NA	NA	NA	27618701	27613385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
tx.19047	chr8	-	6068	4	ISM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	20199	528	29	-528	3prime_fragment	FALSE	canonical	3	14	junction_2	23.0988215187606	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAGAGCTGACTGCT	NA	False	NA	NA	False	NA	NA	NA	27644475	27629328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173
tx.19048	chr8	-	4346	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	0	-1129	0	1129	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTACATGTATATTTC	NA	False	NA	NA	False	NA	NA	NA	27664674	27630856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
tx.19049	chr8	-	5888	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	1	2076	1	1109	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATCCACTTGATCTCTG	NA	False	NA	NA	False	NA	NA	NA	27664673	27630876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
tx.1905	chr10	-	4625	16	NNC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	-387	-376	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	16.867588907593	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTGTTATTCTCAATTA	NA	False	NA	NA	False	NA	NA	NA	83349971	83323689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83349824
tx.19050	chr8	-	1607	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_6	20.0831604418561	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	27713862	27687486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
tx.19051	chr8	-	1986	3	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	38.5	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	NA	False	NA	NA	NA	27718595	27715803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_27716411_27716753_27716822_27717284
tx.19052	chr8	-	2052	3	FSM	ENSMUSG00000031489.16	ENSMUST00000121838.2	1864	3	37	-225	37	0	multi-exon	FALSE	canonical	3	73	junction_1	27.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	NA	False	NA	NA	NA	27718574	27715803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_27716498_27716753_27716822_27717284
tx.19053	chr8	-	2144	3	ISM	ENSMUSG00000031489.16	ENSMUST00000081438.10	2795	4	1009	0	4	0	3prime_fragment	FALSE	canonical	1	3	junction_1	62.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	NA	False	NA	NA	NA	27718607	27715803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_27716557_27716753_27716822_27717284
tx.19054	chr8	+	835	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	29	1133	29	43	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	3609	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGTTTTCCACTCGAAA	NA	False	NA	NA	False	NA	NA	NA	27750385	27765569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_27750579_27763350_27763531_27765107
tx.19055	chr8	+	1792	6	FSM	ENSMUSG00000039328.12	ENSMUST00000217278.2	1726	6	-33	-33	-23	33	multi-exon	FALSE	canonical	2	5	junction_2	3.55527776692624	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTGGCTTGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	31601824	31619694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_31602201_31608458_31608616_31614879_31614926_31615193_31615236_31618279_31618363_31618606
tx.19056	chr8	+	3675	8	FSM	ENSMUSG00000031577.11	ENSMUST00000209986.2	3652	8	-25	2	0	-2	multi-exon	FALSE	canonical	2	10	junction_7	52.8432414152019	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCAGCAACAGCACTC	NA	False	NA	NA	False	NA	NA	NA	31640342	31653365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
tx.19057	chr8	+	2163	7	FSM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	5	965	4	-965	multi-exon	FALSE	canonical	3	124	junction_5	19.2476549798208	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCTCTTCTATTTGT	NA	False	NA	NA	False	NA	NA	NA	31640347	31650117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
tx.19058	chr8	-	1895	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	4	3	3	-3	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	513	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGGTCTTGAGAATT	NA	False	NA	NA	False	NA	NA	NA	31658788	31649493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
tx.19059	chr8	+	3170	5	FSM	ENSMUSG00000046152.17	ENSMUST00000066173.12	3183	5	15	-2	-1	2	multi-exon	FALSE	canonical	3	13	junction_3	11.5758369027902	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTATTCTTTGGAGGA	NA	False	NA	NA	False	NA	NA	NA	31677373	31751513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622_31726459_31749927
tx.1906	chr10	+	5649	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	14	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_33	60.9430630422038	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTTCCATTGGATGCT	NA	False	NA	NA	False	NA	NA	NA	83379818	83432345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
tx.19060	chr8	-	6362	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	-39	-1304	-3	6	multi-exon	FALSE	canonical	3	28	junction_14	7.07885533384216	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGATATGATTATATA	NA	False	NA	NA	False	NA	NA	NA	33875539	33724405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
tx.19061	chr8	-	6273	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033991.13	6262	34	-5	-6	-5	6	multi-exon	FALSE	canonical	3	10	junction_33	8.54201521159467	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGATATGATTATATA	NA	False	NA	NA	False	NA	NA	NA	33875560	33724405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875479
tx.19062	chr8	+	2217	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-684	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	3	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGATTCTTATTTTTC	NA	False	NA	NA	False	NA	NA	NA	33875668	33907499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_33876092_33876357_33877237_33906584
tx.19063	chr8	+	2078	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-679	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	5	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGGATTCTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	33875673	33907498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_33876092_33876357_33877237_33906717
tx.19064	chr8	+	9423	11	NIC	ENSMUSG00000009628.15	novel	706	6	NA	NA	-39	2	combination_of_known_splicesites	TRUE	canonical	3	10	junction_6	4.61410879802373	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGCCTACATGTTTT	NA	False	NA	NA	False	NA	NA	NA	34006726	34075612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_34006848_34017251_34017328_34029640_34029777_34036214_34036381_34047229_34047468_34053003_34053151_34055070_34055234_34060602_34067607_34068978_34069029_34071539_34072775_34075525
tx.19065	chr8	+	6578	4	FSM	ENSMUSG00000009628.15	ENSMUST00000009772.8	8405	4	1830	-3	1830	3	multi-exon	FALSE	canonical	3	20	junction_3	1.63299316185545	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCCTACATGTTTTT	7761	False	NA	NA	False	NA	NA	NA	34062401	34075613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_34067607_34068978_34069029_34071539_34072775_34075525
tx.19066	chr8	+	1857	7	FSM	ENSMUSG00000009630.11	ENSMUST00000009774.11	1469	7	-28	-360	-28	360	multi-exon	FALSE	canonical	3	909	junction_3	33.4398298772919	760	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTAACTGTGATGTA	8837	False	NA	NA	False	NA	NA	NA	34089624	34109829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149
tx.19067	chr8	-	1649	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	-8	1167	-8	-1167	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	166	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCTTAAGGTATCTTT	4662	False	NA	NA	False	NA	NA	NA	34132003	34110780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
tx.19068	chr8	-	236	2	Antisense	novelGene_ENSMUSG00000119577.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCAGCACCCAAGGTGTT	NA	False	NA	NA	False	NA	NA	NA	34190932	34127990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_-_34128177_34190882
tx.19069	chr8	+	2336	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	336	1	336	-1	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	2629	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCAGTGTATTTT	738	False	NA	NA	False	NA	NA	NA	34143601	34188190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
tx.1907	chr10	+	5847	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	19	-8	19	8	multi-exon	FALSE	canonical	3	259	junction_12	27.5850956133924	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTTCCATTGGATGCT	NA	False	NA	NA	False	NA	NA	NA	83379823	83432345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
tx.19070	chr8	+	1553	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	81	0	81	0	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAATGCTTTGTT	5106	False	NA	NA	False	NA	NA	NA	34221941	34267192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
tx.19071	chr8	+	1542	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	25	-1	25	1	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	581	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTAATGCTTTGTTT	5259	False	NA	NA	False	NA	NA	NA	34222094	34267193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
tx.19072	chr8	-	2576	9	FSM	ENSMUSG00000031586.18	ENSMUST00000191473.7	2547	9	-29	0	-7	0	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	271	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGTCTGACAACT	NA	False	NA	NA	False	NA	NA	NA	34419898	34272671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
tx.19073	chr8	-	2473	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	-8	1	-8	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	646	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGTCTGACAACT	NA	False	NA	NA	False	NA	NA	NA	34419899	34272671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
tx.19074	chr8	-	1085	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	-57	11	1	-11	multi-exon	FALSE	canonical	3	456	junction_1	404.856524654791	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAAGTAGACTACAG	NA	False	NA	NA	False	NA	NA	NA	34419890	34293977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
tx.19075	chr8	-	913	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	339	-3	6	0	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	NA	False	NA	NA	NA	34575611	34557573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
tx.19076	chr8	-	3093	5	NIC	ENSMUSG00000031516.12	novel	1249	7	NA	NA	8	0	intron_retention	FALSE	canonical	3	293	junction_4	41.5774878991023	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	NA	False	NA	NA	NA	34575609	34557573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_34557997_34559664_34562127_34564342_34564449_34573495_34573561_34575572
tx.19077	chr8	-	2641	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	238	0	238	0	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	193	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTGTGGGTGTTTT	9024	False	NA	NA	False	NA	NA	NA	34613949	34602725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
tx.19078	chr8	+	1877	6	FSM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	18	2	5	-2	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	283	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCGTGTTTCGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34621734	34637997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
tx.19079	chr8	+	4794	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	3	-2057	3	2057	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGCTTTTGTGGACTC	NA	False	NA	NA	False	NA	NA	NA	35274453	35289105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
tx.1908	chr10	-	2976	21	FSM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	44	0	-19	0	multi-exon	FALSE	canonical	3	74	junction_1	12.9324205004322	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	83484558	83435896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
tx.19080	chr8	-	9167	27	FSM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	-4	0	-4	0	multi-exon	FALSE	canonical	3	108	junction_19	17.0294297993192	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTGTAGCATTCAGC	NA	False	NA	NA	False	NA	NA	NA	35432848	35293613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
tx.19081	chr8	+	4253	2	FSM	ENSMUSG00000046794.10	ENSMUST00000070481.8	4221	2	-32	0	-30	0	multi-exon	FALSE	canonical	2	5	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTCCTTCTATT	NA	False	NA	NA	False	NA	NA	NA	35842862	35855293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_35842960_35851137
tx.19082	chr8	+	4387	2	FSM	ENSMUSG00000046794.10	ENSMUST00000210337.2	4349	2	-28	-10	-28	0	multi-exon	FALSE	canonical	3	17	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTCCTTCTATT	NA	False	NA	NA	False	NA	NA	NA	35842864	35855293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_35843096_35851137
tx.19083	chr8	+	4293	2	ISM	ENSMUSG00000046794.10	ENSMUST00000211648.2	4386	3	859	-5	-43	0	3prime_fragment	FALSE	canonical	3	26	junction_1	0	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTCCTTCTATT	NA	False	NA	NA	False	NA	NA	NA	35843770	35855293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_35843908_35851137
tx.19084	chr8	-	3998	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	3	1078	3	-1078	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	459	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAATTTTTCTTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	35962684	35933484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
tx.19085	chr8	+	6384	3	FSM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	21	3	21	-3	multi-exon	FALSE	canonical	1	3	junction_2	1	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCGTGGTAGCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	36054972	36146600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_36058513_36131821_36131949_36143883
tx.19086	chr8	+	6476	4	NIC	ENSMUSG00000070056.7	novel	6408	3	NA	NA	39	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	1.24721912892465	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCGTGGTAGCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	36054990	36146600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_36058513_36131821_36131949_36138875_36138986_36143883
tx.19087	chr8	+	4953	6	FSM	ENSMUSG00000050271.13	ENSMUST00000110492.2	4780	6	-175	2	-175	-2	multi-exon	FALSE	canonical	3	27	junction_2	3.13687742827162	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAATTTGTTTTTATTGC	NA	False	NA	NA	False	NA	NA	NA	36561806	36614939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_36562143_36566723_36567142_36569709_36571506_36596157_36596316_36606505_36607267_36613455
tx.19088	chr8	-	3603	11	NIC	ENSMUSG00000039633.8	novel	3930	12	NA	NA	179	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	33.7971892322424	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCCCCCTTTAAATCG	NA	False	NA	NA	False	NA	NA	NA	36716491	36683215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36701053_36701177_36703142_36703262_36715720
tx.19089	chr8	-	3753	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	179	-2	179	2	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCCCCCTTTAAATCG	NA	False	NA	NA	False	NA	NA	NA	36716491	36683215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
tx.1909	chr10	-	2758	21	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-18	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	21.7591360122593	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTTATTGTGGTTAG	NA	False	NA	NA	False	NA	NA	NA	83484557	83435899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_83436692_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
tx.19090	chr8	-	6138	14	FSM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	27	-6	27	6	multi-exon	TRUE	canonical	3	9	junction_4	11.0077971289962	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATTGAATTTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	37081070	37034898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
tx.19091	chr8	-	4895	6	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	36	12226	-33	-7832	5prime_fragment	FALSE	canonical	3	26	junction_4	7.49933330370107	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACACATTCCTATGACA	NA	False	NA	NA	False	NA	NA	NA	37081061	37047130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
tx.19092	chr8	+	1706	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	6	1035	6	177	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGTGTTTTGTTATTC	NA	False	NA	NA	False	NA	NA	NA	39473004	39618332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
tx.19093	chr8	+	3425	13	FSM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	-44	0	-44	0	multi-exon	FALSE	canonical	3	62	junction_3	8.82664841387841	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGTCTCCATCCAGTT	1176	False	NA	NA	False	NA	NA	NA	40876811	40938766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
tx.19094	chr8	-	3512	6	FSM	ENSMUSG00000031601.17	ENSMUST00000149992.2	2982	6	-35	-495	-35	-1	multi-exon	FALSE	canonical	3	422	junction_2	73.8495768437437	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGTGACTGATGGCT	NA	False	NA	NA	False	NA	NA	NA	40964380	40945581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055
tx.19095	chr8	-	2597	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	17	1	-15	-1	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	517	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGTGACTGATGGCT	NA	False	NA	NA	False	NA	NA	NA	40964778	40945581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
tx.19096	chr8	-	4284	6	NIC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	422	junction_1	71.4915379607964	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGTGACTGATGGCT	NA	False	NA	NA	False	NA	NA	NA	40964776	40945581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
tx.19097	chr8	-	746	3	FSM	ENSMUSG00000031601.17	ENSMUST00000146280.2	726	3	-15	-5	-15	5	multi-exon	FALSE	canonical	3	487	junction_2	66.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAGTTATAGAGATGTTA	NA	False	NA	NA	False	NA	NA	NA	40964778	40960353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_40960690_40963055_40963268_40964580
tx.19098	chr8	+	5994	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	8	0	8	0	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	40964831	41003798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
tx.19099	chr8	+	4692	11	NIC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	1	-1220	combination_of_known_splicesites	FALSE	canonical	2	13	junction_8	65.3988532009545	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACATACTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	40964844	41002578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40996850_40996995_40997984_40998066_40999316
tx.191	chr1	+	641	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	-5	26	-5	0	multi-exon	FALSE	canonical	3	190	junction_1	367.71796257458	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	37929607	37937419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
tx.1910	chr10	+	1147	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	47	0	-14	0	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTCTTAATTATTT	NA	False	NA	NA	False	NA	NA	NA	83558775	83598626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
tx.19100	chr8	+	4479	11	NIC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	8	3	intron_retention	FALSE	canonical	3	191	junction_7	13.080137613955	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGCTAATTTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	40964851	40999587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40996995_40997984_40998066_40999316
tx.19101	chr8	+	5886	11	NIC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	68.5513676012375	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTTGTGGTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	40964841	41003801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_40965275_40979967_40980043_40981358_40981474_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
tx.19102	chr8	-	5244	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	3	2873	combination_of_known_splicesites	TRUE	canonical	2	6	junction_7	78.4022303395906	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCAACTTGCTAAAGG	NA	False	NA	NA	False	NA	NA	NA	41087829	41001262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
tx.19103	chr8	-	3586	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	-4	1190	combination_of_known_junctions	FALSE	canonical	3	4	junction_12	79.1157731148192	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTGAGCATTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	41087844	41002945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41087740
tx.19104	chr8	-	3164	12	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	-5	951	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	82.870206192456	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAAAGTGTGAAAATTT	NA	False	NA	NA	False	NA	NA	NA	41087824	41003184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41087740
tx.19105	chr8	-	3435	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-5	-942	-5	936	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	443	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTTATAACAGTACTTT	NA	False	NA	NA	False	NA	NA	NA	41087824	41003199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
tx.19106	chr8	+	7692	12	FSM	ENSMUSG00000031596.16	ENSMUST00000098816.10	3677	12	-1	-4014	-1	0	multi-exon	FALSE	canonical	1	1	junction_4	2.4528613751331	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGTTTAGTATGTATAT	NA	False	NA	NA	False	NA	NA	NA	41315431	41375107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_41315595_41351973_41352366_41353092_41353249_41355535_41355702_41357482_41357617_41358541_41358765_41361092_41361233_41364031_41364135_41365516_41365723_41366999_41367167_41367956_41368066_41369374
tx.19107	chr8	-	5979	13	ISM	ENSMUSG00000045636.17	ENSMUST00000118835.8	6426	14	30149	-3	-1742	-1	3prime_fragment	FALSE	canonical	3	91	junction_10	15.6436000403431	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTTGAGTCCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	41537555	41443951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650
tx.19108	chr8	-	4139	10	FSM	ENSMUSG00000045636.17	ENSMUST00000051379.14	3964	10	-37	-138	-37	0	multi-exon	TRUE	canonical	3	9	junction_9	37.6133677314165	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGAGTCCTTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	41494940	41443950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41494509
tx.19109	chr8	-	6233	15	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-34	-361	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	38.0332829538143	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGCCTCTGACATACTT	NA	False	NA	NA	False	NA	NA	NA	41586797	41444449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586517
tx.1911	chr10	-	3097	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	-8	0	-8	0	multi-exon	FALSE	canonical	3	271	junction_1	0	698	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGGTTCTGAGAACT	NA	False	NA	NA	False	NA	NA	NA	84369934	84362168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_84364642_84369310
tx.19110	chr8	-	6573	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-34	9	-34	-5	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGAATCTTGAGTC	NA	False	NA	NA	False	NA	NA	NA	41586797	41443959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
tx.19111	chr8	-	6377	14	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-16	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	31.6824107026122	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGAATCTTGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	41586779	41443957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
tx.19112	chr8	-	6640	14	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-520	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	31.6824107026122	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATCTTGAGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	41587283	41443955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940
tx.19113	chr8	-	3850	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-34	-367	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	35.5937728636157	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGCAGCCTCTGAC	NA	False	NA	NA	False	NA	NA	NA	41586797	41444455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41586517
tx.19114	chr8	+	6630	38	ISM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-38	954	-12	-954	5prime_fragment	TRUE	canonical	3	93	junction_5	36.5724712558759	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAATGCTTTATGACTTT	NA	False	NA	NA	False	NA	NA	NA	41692776	41784175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
tx.19115	chr8	+	6517	37	ISM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-33	1202	-12	-950	5prime_fragment	FALSE	canonical	3	55	junction_5	37.9212960136916	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTATGACTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	41692776	41784179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
tx.19116	chr8	+	8342	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-12	1742	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	42.5841838011169	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGAATTGTATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	41692776	41787123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
tx.19117	chr8	+	6768	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-31	-253	-5	1	multi-exon	FALSE	canonical	3	93	junction_5	36.1727924568649	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTTGGGAAATGTTG	NA	False	NA	NA	False	NA	NA	NA	41692783	41785382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
tx.19118	chr8	+	6658	38	FSM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-33	-1	-12	1	multi-exon	FALSE	canonical	3	55	junction_5	37.5002702692963	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTTGGGAAATGTTG	NA	False	NA	NA	False	NA	NA	NA	41692776	41785382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
tx.19119	chr8	-	2189	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	119	465	-19	-1	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	1238	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCAGTCATGCATGCT	7620	False	NA	NA	False	NA	NA	NA	41827691	41793698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
tx.1912	chr10	-	2387	3	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1014	1074	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	10	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGGCGTTTTTGACTGT	8445	False	NA	NA	False	NA	NA	NA	84390216	84382206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_84384062_84385083_84385495_84390095
tx.19120	chr8	-	1073	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	-37	3	-37	-3	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAGAGTTCTCGAGTCC	NA	False	NA	NA	False	NA	NA	NA	41870148	41850498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
tx.19121	chr8	-	1463	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	56.917093702644	15	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	43633331	43582844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43633233
tx.19122	chr8	-	3876	2	ISM	ENSMUSG00000031651.6	ENSMUST00000059692.4	1850	6	2216	1	-230	-1	intron_retention	FALSE	canonical	3	244	junction_1	0	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	43592307	43582844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_43583726_43589312
tx.19123	chr8	-	1479	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38827	-1	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_6	46.881647676771	18	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	43633350	43582844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43633233
tx.19125	chr8	+	1556	8	FSM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	-17	-20	-17	3	multi-exon	FALSE	canonical	3	424	junction_1	49.9477277781891	272	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	NA	False	NA	NA	NA	43633560	43646921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
tx.19126	chr8	-	1796	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	2773	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	NA	NA	NA	43760041	43748103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
tx.19127	chr8	+	1172	5	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_4	30.1775993080961	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTATGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	43806967	43824716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_+_43807132_43809132_43809201_43811094_43811168_43818030_43818205_43824023
tx.19128	chr8	+	8368	19	ISM	ENSMUSG00000070047.15	ENSMUST00000189017.8	14651	27	74069	-12	-19964	0	3prime_fragment	FALSE	canonical	3	28	junction_2	12.6130688641916	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTTTCTTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	45477313	45505294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45502878_45502915_45503817
tx.19129	chr8	+	9211	18	ISM	ENSMUSG00000070047.15	ENSMUST00000098796.10	14627	26	73188	2	-20845	-2	3prime_fragment	FALSE	canonical	3	28	junction_2	12.0097999199673	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGGTTTTCTTCTGC	NA	False	NA	NA	False	NA	NA	NA	45476432	45505292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45503817
tx.1913	chr10	-	2748	2	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1014	413	intron_retention	FALSE	canonical	3	31	junction_1	0	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCGCATTTATTCAAAA	8445	False	NA	NA	False	NA	NA	NA	84390216	84382867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_84385495_84390095
tx.19130	chr8	+	1583	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	6	51	0	47	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGAATATTCTTTTAA	8866	False	NA	NA	False	NA	NA	NA	46428570	46449944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
tx.19131	chr8	-	2512	2	FSM	ENSMUSG00000050914.17	ENSMUST00000144525.2	416	2	-2033	-63	-34	0	multi-exon	FALSE	canonical	3	53	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGCATTCTTTACTA	NA	False	NA	NA	False	NA	NA	NA	46452938	46449938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_46450163_46450650
tx.19132	chr8	-	714	5	NNC	ENSMUSG00000050914.17	novel	927	5	NA	NA	-33	-4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_4	13.6083614002568	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTCTGTGCATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46452937	46449942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452895
tx.19133	chr8	-	3752	19	FSM	ENSMUSG00000038291.17	ENSMUST00000110378.9	3445	19	-312	5	-312	0	multi-exon	TRUE	canonical	3	42	junction_13	6.48288344625891	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGCTCAAAGGTATT	NA	False	NA	NA	False	NA	NA	NA	46605508	46486302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
tx.19134	chr8	+	4765	6	NIC	ENSMUSG00000031631.16	novel	2043	6	NA	NA	-15	0	intron_retention	FALSE	canonical	3	9	junction_1	20.9990475974507	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTTGATTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	46616672	46648623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_46616787_46617798_46617934_46622595_46623690_46634754_46635024_46644616_46644768_46645621
tx.19135	chr8	+	4580	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	35	4	-6	0	multi-exon	FALSE	canonical	3	40	junction_1	7.58287544405155	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTTGATTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	46616722	46648623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
tx.19136	chr8	+	4667	5	ISM	ENSMUSG00000031631.16	ENSMUST00000110376.8	2043	6	-20	-2	0	0	intron_retention	FALSE	canonical	2	6	junction_1	21.868927728629	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGATTCTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	46616751	46648625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_46616901_46622595_46623690_46634754_46635024_46644616_46644768_46645621
tx.19137	chr8	+	4973	5	NNC	ENSMUSG00000031631.16	novel	4619	5	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	13	junction_1	18.8729303501073	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGTTTTGATTCTGTT	NA	False	NA	NA	False	NA	NA	NA	46616742	46648621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_46617202_46622595_46623690_46634754_46635024_46644616_46644768_46645621
tx.19138	chr8	+	4491	4	FSM	ENSMUSG00000031631.16	ENSMUST00000164504.2	4521	4	28	2	28	0	multi-exon	FALSE	canonical	3	51	junction_2	3.55902608401044	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTTGATTCTGTTTT	5184	False	NA	NA	False	NA	NA	NA	46622620	46648623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_46623690_46634754_46635024_46644616_46644768_46645621
tx.19139	chr8	-	2595	3	ISM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	257	376	3	-376	intron_retention	FALSE	canonical	3	7531	junction_1	92	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATCTCCCTGCCCTTAT	NA	False	NA	NA	False	NA	NA	NA	46664064	46660209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_46660658_46661434_46661576_46662058
tx.1914	chr10	+	2465	10	FSM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	256	4	-15	-4	multi-exon	FALSE	canonical	2	4	junction_1	3.1308895119123	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTAATCTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	84412745	84450219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_84412877_84420611_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
tx.19140	chr8	-	1295	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	255	375	1	-375	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	3573	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTCCCTGCCCTTATT	NA	False	NA	NA	False	NA	NA	NA	46664066	46660208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
tx.19141	chr8	+	3888	21	FSM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	5	4	5	-4	multi-exon	FALSE	canonical	3	339	junction_9	34.1571368823559	398	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAATGTCTTTCAAGTG	2211	False	NA	NA	False	NA	NA	NA	46924078	46989084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
tx.19142	chr8	+	2738	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	0	-1741	0	1741	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAATCAGCACCTTTG	NA	False	NA	NA	False	NA	NA	NA	47005072	47017775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
tx.19143	chr8	+	3999	7	ISM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	-17	14112	0	-2748	5prime_fragment	FALSE	canonical	3	36	junction_3	136.084532552381	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCCTTGTCAACTTCT	NA	False	NA	NA	False	NA	NA	NA	47005072	47018930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452
tx.19144	chr8	+	2611	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	23	297	-4	-297	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	227	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGGCAGTGTTAACAG	NA	False	NA	NA	False	NA	NA	NA	47005085	47032745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
tx.19145	chr8	+	1600	13	NIC	ENSMUSG00000031629.15	novel	2931	13	NA	NA	0	346	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	79.2867510299728	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAGAACGGTTGCTATAA	NA	False	NA	NA	False	NA	NA	NA	47005095	47031759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014859_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
tx.19146	chr8	+	2716	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	-1	295	-1	-295	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAGTGTTAACAGTT	NA	False	NA	NA	False	NA	NA	NA	47005088	47032747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
tx.19147	chr8	-	5023	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-4	15	intron_retention	FALSE	canonical	2	8	junction_7	48.1714148339095	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	NA	False	NA	NA	NA	47070251	47028613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046592_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
tx.19148	chr8	-	5070	14	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-8	0	intron_retention	FALSE	canonical	3	18	junction_6	35.660463247878	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAATTGAAAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	47070225	47028628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
tx.19149	chr8	+	2490	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	111	0	-5	0	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	47070436	47092724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
tx.1915	chr10	+	4931	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	43	1	42	-1	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	261	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTCTGAGAGGTGATG	NA	False	NA	NA	False	NA	NA	NA	84458198	84563041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
tx.19150	chr8	-	4334	30	FSM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	-15	13	-12	0	multi-exon	TRUE	canonical	3	87	junction_18	20.4181612288351	224	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4039	False	NA	NA	False	NA	NA	NA	47986517	47943162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
tx.19151	chr8	+	2937	7	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_6	72.1795600491503	122	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTATATGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	47986679	48005860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003729
tx.19152	chr8	+	3004	6	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_5	75.3885933016395	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTCTATATGTTTTG	NA	False	NA	NA	False	NA	NA	NA	47986691	48005859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_47986979_47990313_47990395_47995726_47996065_47997145_47997264_48000823_48000874_48003729
tx.19153	chr8	-	1767	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	1	1044	1	533	multi-exon	FALSE	canonical	3	212	junction_1	0	195	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCTCCATGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	48128192	48121256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_48122372_48127540
tx.19154	chr8	-	3391	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	-1	3	0	-3	multi-exon	FALSE	canonical	3	65	junction_1	31	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTTATTAGATGATTGG	NA	False	NA	NA	False	NA	NA	NA	48166967	48162482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_48165330_48165922_48166054_48166554
tx.19155	chr8	-	3356	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	0	108	0	-7	multi-exon	FALSE	canonical	3	60	junction_1	33.5	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACATCTTATTAGATGA	NA	False	NA	NA	False	NA	NA	NA	48166967	48162486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_48165330_48165953_48166054_48166554
tx.19156	chr8	-	3800	8	ISM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	134206	2123	134206	-2123	3prime_fragment	TRUE	canonical	3	199	junction_7	24.3184653114057	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTTGCTTATTCAG	NA	False	NA	NA	False	NA	NA	NA	48309380	48279116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218
tx.19157	chr8	-	6143	21	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	54	-2200	combination_of_known_splicesites	FALSE	canonical	2	6	junction_19	52.2994024822464	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCACTTGCCCCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	48443532	48279193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48373623_48373734_48443100
tx.19158	chr8	-	4823	13	ISM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	121848	2126	121848	-2126	3prime_fragment	FALSE	canonical	3	199	junction_7	23.5022162075551	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTAATGTTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	48321738	48279119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206
tx.19159	chr8	-	6135	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	9	2534	9	-2534	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	388	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAACTTAGAATTTAT	NA	False	NA	NA	False	NA	NA	NA	48443577	48279527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
tx.1916	chr10	+	3234	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-325	0	-285	0	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	84753194	84852311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
tx.19160	chr8	+	2068	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	28	0	-27	0	multi-exon	TRUE	canonical	3	319	junction_1	42.4480859403578	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	NA	False	NA	NA	NA	48563020	48594700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
tx.19161	chr8	+	4924	4	FSM	ENSMUSG00000031562.17	ENSMUST00000173991.8	786	4	-164	-3974	-12	0	multi-exon	FALSE	canonical	3	319	junction_1	45.0209827623619	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	NA	False	NA	NA	NA	48563035	48594700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292
tx.19162	chr8	+	2136	6	NIC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	132.43775896624	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	NA	False	NA	NA	NA	48563220	48594700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
tx.19163	chr8	-	5036	3	ISM	ENSMUSG00000031561.17	ENSMUST00000033965.14	8961	29	438023	-2007	63432	2007	3prime_fragment	FALSE	canonical	3	69	junction_2	1.5	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCGTTTATATGTTTC	NA	False	NA	NA	False	NA	NA	NA	48689702	48678709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_48682237_48685042_48685174_48688324
tx.19164	chr8	-	8788	17	ISM	ENSMUSG00000031561.17	ENSMUST00000190840.8	8663	27	338958	-2251	-35627	2007	3prime_fragment	FALSE	canonical	3	50	junction_6	12.0772254677968	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCGTTTATATGTTTC	NA	False	NA	NA	False	NA	NA	NA	48788761	48678709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623
tx.19165	chr8	-	10552	26	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-35	2002	combination_of_known_junctions	FALSE	canonical	3	47	junction_25	12.7658293894286	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTGTGCGTTTATAT	NA	False	NA	NA	False	NA	NA	NA	49009109	48678714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
tx.19166	chr8	-	4625	7	ISM	ENSMUSG00000031561.17	ENSMUST00000033965.14	8961	29	398008	0	23417	0	3prime_fragment	FALSE	canonical	3	50	junction_6	11.2607972877392	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTGTGATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	48729717	48680716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064
tx.19167	chr8	-	5639	20	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-31	950	combination_of_known_junctions	FALSE	canonical	3	47	junction_19	13.0230990180234	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAACAAACCTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	49009105	48727999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
tx.19168	chr8	-	2741	11	NNC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	3	4955	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	24.1331721909906	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGTCACTCTATATTT	NA	False	NA	NA	False	NA	NA	NA	49009071	48783272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_48784145_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
tx.19169	chr8	+	2256	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	0	42640	0	-42640	5prime_fragment	FALSE	canonical	3	54	junction_1	0	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGTTTCTCGTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	52809645	52813734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_52809842_52811674
tx.1917	chr10	+	3533	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	84	-1	-32	1	multi-exon	FALSE	canonical	3	175	junction_1	7	273	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAATGTTTCATAAAGA	NA	False	NA	NA	False	NA	NA	NA	84938574	84953450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_84938862_84946662_84946730_84950271
tx.19170	chr8	+	1273	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	-8	-84	-8	1	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCTACTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	53964753	53976457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
tx.19171	chr8	-	2198	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	55	0	-44	0	multi-exon	FALSE	canonical	3	23	junction_4	6.19039478985961	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	54092045	54039901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
tx.19172	chr8	+	2239	7	FSM	ENSMUSG00000031520.7	ENSMUST00000033919.6	2449	7	-435	645	-435	-645	multi-exon	FALSE	canonical	3	36	junction_4	8.69386757049665	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGAAGTTCAGTCTTTT	586	False	NA	NA	False	NA	NA	NA	54530205	54639486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_54530961_54609992_54610195_54612327_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
tx.19173	chr8	+	2341	7	NIC	ENSMUSG00000031520.7	novel	2449	7	NA	NA	-660	-647	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	19.6044212700435	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGAAGTTCAGTCTT	361	False	NA	NA	False	NA	NA	NA	54529980	54639484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_54530961_54609992_54610195_54612448_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
tx.19174	chr8	-	3444	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	423.496753234308	1105	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTCCAGGTTTATGT	NA	False	NA	NA	False	NA	NA	NA	54983021	54973473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_54976431_54977975_54978092_54979485_54979557_54981374_54981451_54982797
tx.19175	chr8	+	1760	7	FSM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	-74	-3	-74	3	multi-exon	FALSE	canonical	3	14	junction_2	3.18416219575713	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGCCTATTCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	56747545	56774081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
tx.19176	chr8	-	1561	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	38.0914688611505	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATGTGCCGATTTTCTC	NA	False	NA	NA	False	NA	NA	NA	57003903	56984553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
tx.19177	chr8	-	1767	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	55.4532041566551	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCCGATTTTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	57003904	56984550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097_57003157_57003579
tx.19178	chr8	-	1704	11	FSM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	-12	-2	3	2	multi-exon	FALSE	canonical	3	35	junction_10	43.9777216326631	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATGTGCCGATTTTCT	NA	False	NA	NA	False	NA	NA	NA	57003904	56984554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003579
tx.19179	chr8	+	1900	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	25	1646	6	-100	multi-exon	TRUE	canonical	3	53	junction_4	8.56504524214554	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAATATAAAAATGTGTCA	NA	False	NA	NA	False	NA	NA	NA	57004149	57045328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
tx.1918	chr10	-	1546	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	13	8	13	-8	multi-exon	FALSE	canonical	3	41	junction_2	4.5	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGAACTATTATTCCAA	NA	False	NA	NA	False	NA	NA	NA	84963878	84955304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_84956679_84962231_84962351_84963825
tx.19180	chr8	-	1164	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	15	-1	15	1	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	799	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCTTCAGCCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	57940879	57935739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
tx.19181	chr8	-	2789	3	ISM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	6	-1	6	1	intron_retention	FALSE	canonical	3	1666	junction_1	39	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCTTCAGCCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	57940888	57935739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_57936085_57938075_57938175_57938543
tx.19182	chr8	+	1139	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	-21	1510	-21	1280	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	2693	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGTGTTTGTATTA	NA	False	NA	NA	False	NA	NA	NA	57964919	57967523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
tx.19183	chr8	+	1165	4	ISM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	522	1510	-119	1280	3prime_fragment	FALSE	canonical	3	6480	junction_3	312.16377467961	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGTGTTTGTATTA	NA	False	NA	NA	False	NA	NA	NA	57965462	57967523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_57965783_57966095_57966242_57966323_57966499_57966999
tx.19184	chr8	-	4328	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	-13	-2	-12	2	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTCAGTGCTTGTAAT	NA	False	NA	NA	False	NA	NA	NA	58106078	57976859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
tx.19185	chr8	-	3870	11	NIC	ENSMUSG00000031608.14	novel	3413	12	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	50.6782991032651	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTCAGTGCTTGTAAT	NA	False	NA	NA	False	NA	NA	NA	58106081	57976859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58105886
tx.19186	chr8	-	4329	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	-42	-874	-13	2	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTCAGTGCTTGTAAT	NA	False	NA	NA	False	NA	NA	NA	58106079	57976859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
tx.19187	chr8	+	2837	7	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	-31	1	2	-1	intron_retention	FALSE	canonical	3	724	junction_4	83.6827673751027	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	61343453	61360613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581
tx.19188	chr8	+	1203	8	FSM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	-13	1	-7	-1	multi-exon	FALSE	canonical	3	724	junction_4	79.3373062516324	326	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	61343471	61360613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
tx.19189	chr8	-	4546	8	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	20627	0	-11646	0	3prime_fragment	FALSE	canonical	3	202	junction_1	23.6185675834475	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	NA	False	NA	NA	NA	61387640	61363422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518
tx.1919	chr10	-	3025	13	FSM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	1	0	1	0	multi-exon	FALSE	canonical	3	194	junction_12	27.3651999200932	370	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	85020927	84967563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
tx.19190	chr8	-	5163	12	NNC	ENSMUSG00000004319.16	novel	5684	12	NA	NA	-10220	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	65.6371191092257	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTGGCTTTTAATTG	NA	False	NA	NA	False	NA	NA	NA	61418487	61363424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61418315
tx.19191	chr8	-	5366	3	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	30079	3	-2194	-3	3prime_fragment	FALSE	canonical	3	202	junction_1	19	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	3231	False	NA	NA	False	NA	NA	NA	61378188	61363425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_61366210_61372373_61372591_61375823
tx.19192	chr8	-	3985	5	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	25765	3	-6508	-3	3prime_fragment	FALSE	canonical	3	202	junction_1	25.8783210429116	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	61382502	61363425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104
tx.19193	chr8	-	3582	4	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	27816	7	-4457	-7	3prime_fragment	FALSE	canonical	3	202	junction_1	29.0095769627128	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTGGTTTGGCTTTT	968	False	NA	NA	False	NA	NA	NA	61380451	61363429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265
tx.19194	chr8	-	4386	7	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	21981	3	-10292	-3	3prime_fragment	FALSE	canonical	3	202	junction_1	23.6202596655216	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	61386286	61363425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114
tx.19195	chr8	-	5666	13	NNC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	83.8859592939526	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	61436302	61363425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61379337_61379521_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
tx.19196	chr8	-	5674	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-44	-1531	3	-3	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	61436317	61363425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
tx.19197	chr8	-	5501	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	14	3	0	-3	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	61436320	61363425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
tx.19198	chr8	-	5577	13	NIC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	80.1138079373476	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTGGCTTTTAATTG	NA	False	NA	NA	False	NA	NA	NA	61436319	61363424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
tx.19199	chr8	-	5755	14	FSM	ENSMUSG00000004319.16	ENSMUST00000004430.14	4175	14	-50	-1530	-3	-4	multi-exon	FALSE	canonical	3	31	junction_1	79.7742376590516	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGTTTGGCTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	61436323	61363426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
tx.192	chr1	+	709	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	63	197	-3	0	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	37929620	37937419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
tx.1920	chr10	+	5797	17	FSM	ENSMUSG00000020042.16	ENSMUST00000105307.8	5788	17	-10	1	-10	-1	multi-exon	TRUE	canonical	3	26	junction_1	8.15379512865022	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCATCCTCTTTATGG	NA	False	NA	NA	False	NA	NA	NA	85222667	85496155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
tx.19200	chr8	+	5532	34	NIC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	1	0	intron_retention	FALSE	canonical	3	24	junction_17	14.9073046478596	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTTGTCCTTATT	NA	False	NA	NA	False	NA	NA	NA	61446229	61584380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
tx.19201	chr8	+	5485	34	FSM	ENSMUSG00000031644.20	ENSMUST00000120689.8	5478	34	1	-8	1	1	multi-exon	FALSE	canonical	3	7	junction_17	17.7121147315746	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCAGTTGTCCTTATTG	NA	False	NA	NA	False	NA	NA	NA	61446229	61584381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61524784_61524869_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
tx.19202	chr8	+	5400	33	FSM	ENSMUSG00000031644.20	ENSMUST00000034065.14	5401	33	1	0	1	0	multi-exon	FALSE	canonical	3	31	junction_16	13.1719028024618	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTTGTCCTTATT	NA	False	NA	NA	False	NA	NA	NA	61446229	61584380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
tx.19203	chr8	+	5176	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	304	-1	-68	1	multi-exon	FALSE	canonical	3	41	junction_9	7.49876022810956	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCCTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	61677209	61849106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
tx.19204	chr8	+	4264	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	1	44	0	-44	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTCATAAATTAAAAGCT	2567	False	NA	NA	False	NA	NA	NA	61940768	61959684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
tx.19205	chr8	-	3235	8	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	57533	-1	232	1	3prime_fragment	FALSE	canonical	3	101	junction_4	7.79848232226067	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGGCCCTCTGTGATG	NA	False	NA	NA	False	NA	NA	NA	61986643	61964465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387
tx.19206	chr8	-	4249	12	FSM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	-57	1	-57	-1	multi-exon	FALSE	canonical	3	58	junction_8	23.5231554638234	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGGCCCTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	62044233	61964467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62044093
tx.19207	chr8	-	5562	21	FSM	ENSMUSG00000053626.6	ENSMUST00000066166.6	4767	21	-17	-778	-2	778	multi-exon	TRUE	canonical	0	0	junction_18	1.14017542509914	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTACTTTTCTCATTC	NA	False	NA	NA	False	NA	NA	NA	64659044	64467186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_64469215_64470514_64470766_64478095_64478310_64491489_64491618_64494439_64494566_64500037_64500219_64504387_64504549_64506893_64507020_64509288_64509485_64523186_64523333_64524306_64524424_64527258_64527362_64538484_64538601_64546902_64547028_64551462_64551569_64554870_64555050_64570938_64571057_64571565_64571719_64574491_64574573_64577925_64578037_64658248
tx.19208	chr8	-	2118	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	35	junction_4	3.34477204006491	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGGTGTGCATTTCTC	NA	False	NA	NA	False	NA	NA	NA	65146089	65045575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
tx.19209	chr8	-	1835	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	209	0	-2	0	multi-exon	TRUE	canonical	3	690	junction_2	21.3822356174466	552	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	65186617	65171172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
tx.1921	chr10	+	5845	18	NNC	ENSMUSG00000020042.16	novel	5788	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.4534684967911	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	NA	False	NA	NA	NA	85222677	85496156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85464662_85464720_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
tx.19210	chr8	-	3190	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	51	171	-42	2	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	370	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTTACCAGTGTGAC	NA	False	NA	NA	False	NA	NA	NA	65302618	65192879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
tx.19211	chr8	+	2694	6	NIC	ENSMUSG00000025521.16	novel	1122	6	NA	NA	12	1384	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	230.18740191418	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGACTGTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	65399848	65423069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65417185_65418190_65418294_65421362
tx.19212	chr8	+	1107	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	16	-1	16	1	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTGTATGTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	65399852	65421686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
tx.19213	chr8	-	971	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	-23	-3	-23	0	multi-exon	FALSE	canonical	3	429	junction_2	5	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	65489847	65481068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_65481644_65488316_65488407_65489541
tx.19214	chr8	-	1002	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-2	3328	0	-2116	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGAATTTGCTATTGAA	NA	False	NA	NA	False	NA	NA	NA	66939173	66929097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
tx.19215	chr8	-	3503	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-28	-325	-4	325	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGATGTGCTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	66939177	66926656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
tx.19216	chr8	-	2510	6	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2122	intron_retention	FALSE	canonical	3	740	junction_4	84.295670114188	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATGTAAGAATTTGCT	NA	False	NA	NA	False	NA	NA	NA	66939173	66929103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936823_66939063
tx.19217	chr8	+	6391	2	FSM	ENSMUSG00000025519.6	ENSMUST00000183187.2	5485	2	-42	-864	-39	864	multi-exon	FALSE	canonical	3	13	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATAGAGGTGACTTT	NA	False	NA	NA	False	NA	NA	NA	66964368	66971851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_66966353_66967444
tx.19218	chr8	+	2950	8	FSM	ENSMUSG00000014907.11	ENSMUST00000118009.2	2990	8	34	6	34	-6	multi-exon	FALSE	canonical	3	67	junction_6	3.64215679542342	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAATTTAGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	67312902	67343210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67336094_67336256_67338416_67338469_67340424_67340528_67341712
tx.19219	chr8	+	2614	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	112	-8	112	3	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	68729330	68800354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
tx.1922	chr10	+	3854	15	ISM	ENSMUSG00000020042.16	ENSMUST00000105307.8	5788	17	174808	2	-36779	1	3prime_fragment	FALSE	canonical	3	31	junction_1	6.30192714288937	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGCATCCTCTTTATG	NA	False	NA	NA	False	NA	NA	NA	85397485	85496154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
tx.19220	chr8	+	2424	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	4	160	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	163.936296697833	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	NA	False	NA	NA	NA	69246611	69280313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263227_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
tx.19221	chr8	+	2421	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	31	1749	4	160	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	608	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	NA	False	NA	NA	NA	69246611	69280313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
tx.19222	chr8	+	2145	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	69	1901	5	-1901	multi-exon	TRUE	canonical	3	87	junction_5	14.4871164560059	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCAGGAACGTGTGACT	NA	False	NA	NA	False	NA	NA	NA	69333211	69357685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
tx.19223	chr8	+	2705	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	120	0	-2	0	multi-exon	TRUE	canonical	3	1214	junction_12	88.1479391228044	2143	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	69541417	69566363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
tx.19224	chr8	+	2999	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	2	0	2	0	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGACCCTTGTCCTGTA	7202	False	NA	NA	False	NA	NA	NA	69661691	69683188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
tx.19225	chr8	+	6532	5	NIC	ENSMUSG00000079038.4	novel	2002	6	NA	NA	6	4803	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	0.82915619758885	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGCATTAAATCCATC	7167	False	NA	NA	False	NA	NA	NA	69723751	69760830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_69723844_69743913_69743975_69752904_69753032_69753409_69753474_69754642
tx.19226	chr8	-	5666	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	-16	2018	1	-2018	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGCTTACCTCATCATTT	NA	False	NA	NA	False	NA	NA	NA	69848190	69821179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
tx.19227	chr8	-	5777	5	FSM	ENSMUSG00000110444.3	ENSMUST00000213012.2	7778	5	-17	2018	0	-2018	multi-exon	FALSE	canonical	2	5	junction_3	16.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGCTTACCTCATCATTT	NA	False	NA	NA	False	NA	NA	NA	69848191	69821179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69829137_69829248_69848092
tx.19228	chr8	-	2461	5	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	354	201	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	46.3215662515852	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTGCCTCCCATACT	NA	False	NA	NA	False	NA	NA	NA	70077842	70063306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70077727
tx.19229	chr8	-	2463	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	-1	-203	-1	203	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCCTCCCATACTTT	NA	False	NA	NA	False	NA	NA	NA	70078200	70063304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
tx.1923	chr10	+	3862	14	NNC	ENSMUSG00000020042.16	novel	2806	5	NA	NA	-4963	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	12.3872429128619	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGCATCCTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	85460415	85496153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_85460666_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
tx.19230	chr8	-	3325	4	NIC	ENSMUSG00000054648.9	novel	3180	5	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	68	junction_3	10.6770782520313	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	NA	False	NA	NA	NA	70169535	70157791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70160345_70160760_70161116_70163335_70163635_70169417
tx.19231	chr8	-	3622	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238292.2	6080	5	-28	2486	-6	-2	multi-exon	FALSE	canonical	3	12	junction_4	30.1029483605842	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	NA	False	NA	NA	NA	70169515	70157791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70168933
tx.19232	chr8	-	3172	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	3	5	1	-2	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	NA	False	NA	NA	NA	70169549	70157791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
tx.19233	chr8	-	2291	4	FSM	ENSMUSG00000092260.8	ENSMUST00000130458.8	2291	4	-1	1	-1	-1	multi-exon	FALSE	canonical	3	15	junction_3	1.24721912892465	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTTGGAAAAGGTATC	9671	False	NA	NA	False	NA	NA	NA	70202613	70194289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70196261_70196841_70196903_70197110_70197238_70202481
tx.19234	chr8	+	3842	26	FSM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	69	4	-18	0	multi-exon	FALSE	canonical	3	203	junction_10	47.3625337160081	555	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGCTGCCACTTAT	9233	False	NA	NA	False	NA	NA	NA	70243881	70260395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
tx.19235	chr8	+	3843	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-19	0	intron_retention	TRUE	canonical	3	87	junction_12	60.2107410129898	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGCTGCCACTTAT	9232	False	NA	NA	False	NA	NA	NA	70243880	70260395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
tx.19236	chr8	+	3902	21	FSM	ENSMUSG00000036246.15	ENSMUST00000036074.15	3933	21	19	12	8	-12	multi-exon	TRUE	canonical	1	2	junction_20	2.88790581563873	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTGCACATTTGTC	NA	False	NA	NA	False	NA	NA	NA	70261347	70274508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70261471_70262423_70262509_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273083_70273151_70273246
tx.19237	chr8	+	2716	3	FSM	ENSMUSG00000031861.17	ENSMUST00000034325.6	5837	3	146	2975	-9	-2974	multi-exon	FALSE	canonical	3	18	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAAACGTCTCTTTCTTT	480	False	NA	NA	False	NA	NA	NA	70275224	70280777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70275362_70276203_70276946_70278940
tx.19238	chr8	-	6971	3	Fusion	ENSMUSG00000036199.10_ENSMUSG00000048967.17	novel	1251	5	NA	NA	910	-1	intron_retention	FALSE	canonical	3	6124	junction_1	34.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCCTGCCTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	70354298	70340440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr8_-_70347226_70347891_70347971_70354191
tx.19239	chr8	-	500	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	910	-11	910	11	3prime_fragment	FALSE	canonical	3	6124	junction_2	115.905133622286	746	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGACTCTATCGTGGATC	NA	False	NA	NA	False	NA	NA	NA	70354298	70346818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
tx.1924	chr10	+	3633	13	ISM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	26484	0	-4630	0	3prime_fragment	FALSE	canonical	3	37	junction_10	5.1713688280334	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	NA	False	NA	NA	NA	85460748	85496156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
tx.19240	chr8	-	3405	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-114	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	379.372884012507	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	NA	False	NA	NA	NA	70427035	70361305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
tx.19241	chr8	-	3467	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-101	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_6	285.503308017418	313	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	NA	False	NA	NA	NA	70427022	70361305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
tx.19242	chr8	-	3391	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-103	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	313.771143635791	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	NA	False	NA	NA	NA	70427024	70361305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
tx.19243	chr8	-	3466	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	-103	0	-103	0	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	675	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	NA	False	NA	NA	NA	70427024	70361305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
tx.19244	chr8	-	3498	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	NA	False	NA	NA	NA	70448984	70361305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
tx.19245	chr8	-	3574	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	49	-1	49	0	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	299	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	NA	False	NA	NA	NA	70448985	70361305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
tx.19246	chr8	-	3576	13	FSM	ENSMUSG00000036180.16	ENSMUST00000065169.12	3812	13	50	186	50	0	multi-exon	FALSE	canonical	3	188	junction_6	322.35922853584	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	NA	False	NA	NA	NA	70448984	70361305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
tx.19247	chr8	-	3853	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-7	10	intron_retention	TRUE	canonical	3	216	junction_12	35.9747123796125	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGAGTGCTTTTAGTG	NA	False	NA	NA	False	NA	NA	NA	70495357	70471205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
tx.19248	chr8	-	2904	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	27	2438	-7	5	multi-exon	FALSE	canonical	3	161	junction_6	45.5936155374607	236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATGTTAGAGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	70495357	70471210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
tx.19249	chr8	+	4168	8	FSM	ENSMUSG00000011306.8	ENSMUST00000211808.2	2963	8	-234	-971	-13	971	multi-exon	FALSE	canonical	3	384	junction_4	42.1644012728021	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAACTTGTGGAAGAAA	2144	False	NA	NA	False	NA	NA	NA	70495449	70520532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486
tx.1925	chr10	+	2573	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	5	-6	5	6	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCACTTTGACTTCACTC	NA	False	NA	NA	False	NA	NA	NA	85707699	85724966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
tx.19250	chr8	+	2079	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	214	388	-7	-388	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATTCCAGTTCCTGCTG	2371	False	NA	NA	False	NA	NA	NA	70495676	70524609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
tx.19251	chr8	+	3237	5	FSM	ENSMUSG00000007594.11	ENSMUST00000007738.11	3648	5	49	362	9	-362	multi-exon	FALSE	canonical	1	2	junction_2	1.08972473588517	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGCCAGTCCCTGTC	1138	False	NA	NA	False	NA	NA	NA	70536155	70543150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70536214_70537069_70537191_70537431_70537795_70539457_70539782_70540779
tx.19252	chr8	+	1180	5	NNC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	248.840310239318	21	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACACCCCATTTGTGGT	448	False	NA	NA	False	NA	NA	NA	70583983	70586397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236_70585305_70585748
tx.19253	chr8	-	2321	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-101	1389	-101	1071	multi-exon	TRUE	canonical	3	42	junction_5	11.7626261948597	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCCGCCTTTTTTGTTT	9444	False	NA	NA	False	NA	NA	NA	70591905	70584844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
tx.19254	chr8	-	1266	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	-147	2	-89	-2	multi-exon	FALSE	canonical	2	7	junction_5	20.7590341779188	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTCAGGGTGCCTCC	9456	False	NA	NA	False	NA	NA	NA	70591893	70585917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
tx.19255	chr8	+	776	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	-6	-14	-6	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTTTGACCAGTCTG	8815	False	NA	NA	False	NA	NA	NA	70592350	70598199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
tx.19256	chr8	+	1982	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	204	-1376	-4	1313	multi-exon	TRUE	canonical	3	86	junction_5	44.6183818621877	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGGTCTGTGGTGCC	8817	False	NA	NA	False	NA	NA	NA	70592352	70601282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
tx.19257	chr8	+	1329	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110143.8	1312	9	-17	0	-17	0	multi-exon	TRUE	canonical	3	113	junction_6	45.467021015237	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8572	False	NA	NA	False	NA	NA	NA	70605410	70620138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
tx.19258	chr8	+	1357	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110146.9	1342	9	-15	0	-15	0	multi-exon	FALSE	canonical	3	100	junction_6	49.3303595669036	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8574	False	NA	NA	False	NA	NA	NA	70605412	70620138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
tx.19259	chr8	+	2107	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	-8	-19	-5	2	multi-exon	FALSE	canonical	3	25	junction_1	59.2504008425259	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTGGTCTGGCCCAG	5861	False	NA	NA	False	NA	NA	NA	70625049	70635519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
tx.1926	chr10	-	3970	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	76.6399862995812	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	NA	NA	NA	85752826	85727829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
tx.19260	chr8	+	2203	12	FSM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	2	813	-1	1	multi-exon	FALSE	canonical	3	91	junction_1	38.6768771547844	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGTGGTCTGGCCCA	5868	False	NA	NA	False	NA	NA	NA	70625056	70635518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
tx.19261	chr8	+	2167	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1897	816	-1	-2	3prime_fragment	FALSE	canonical	3	184	junction_1	15.5935884260166	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCAGTGTGGTCTGGC	7763	False	NA	NA	False	NA	NA	NA	70626951	70635515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
tx.19262	chr8	-	3104	7	NIC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	19	9	intron_retention	FALSE	canonical	3	75	junction_1	11.231157059221	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTAATTTTAAAGCT	4704	False	NA	NA	False	NA	NA	NA	70687080	70672838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70673528_70674755_70674894_70675167_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
tx.19263	chr8	-	2225	8	FSM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	28	10	11	-10	multi-exon	FALSE	canonical	3	72	junction_3	11.6741472616082	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAAAGCTTCTCATT	4696	False	NA	NA	False	NA	NA	NA	70687088	70672831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
tx.19264	chr8	+	3609	12	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_10	11.7353742277127	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1451	False	NA	NA	False	NA	NA	NA	70687234	70715755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
tx.19265	chr8	+	4259	11	FSM	ENSMUSG00000036054.16	ENSMUST00000131489.8	4609	11	350	0	-41	0	multi-exon	FALSE	canonical	3	99	junction_6	9.88989383158384	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1442	False	NA	NA	False	NA	NA	NA	70687225	70715755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
tx.19266	chr8	+	1857	5	FSM	ENSMUSG00000003573.16	ENSMUST00000087467.12	880	5	190	-1167	-17	1167	multi-exon	FALSE	canonical	3	53	junction_4	81.1202810646018	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTTCTATTTTTCA	NA	False	NA	NA	False	NA	NA	NA	70735666	70740347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70738945
tx.19267	chr8	+	2134	9	ISM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	15	1667	15	-775	5prime_fragment	FALSE	canonical	3	150	junction_8	37.4814537471534	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70735663	70745344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166
tx.19268	chr8	+	2429	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	8	8	8	0	multi-exon	FALSE	canonical	3	142	junction_9	38.9171326009065	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGAGATCTGGCTCCC	NA	False	NA	NA	False	NA	NA	NA	70735656	70747003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
tx.19269	chr8	+	2111	4	FSM	ENSMUSG00000003573.16	ENSMUST00000155711.2	678	4	-41	-1392	-6	1164	multi-exon	FALSE	canonical	3	219	junction_1	13.6707311029399	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTCTTTTTCTATTTT	NA	False	NA	NA	False	NA	NA	NA	70735642	70740344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580
tx.1927	chr10	-	3938	12	FSM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-57	-4	3	0	multi-exon	FALSE	canonical	3	181	junction_11	19.4396714593195	283	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	NA	NA	NA	85752847	85727829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
tx.19270	chr8	-	1534	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	18	585	-8	135	multi-exon	TRUE	canonical	3	250	junction_9	19.6148682268211	266	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9949	False	NA	NA	False	NA	NA	NA	70755121	70746100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
tx.19271	chr8	+	1053	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	249	-2	-2	-1	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	544	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGATACCCACCAGG	701	False	NA	NA	False	NA	NA	NA	70755416	70765642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
tx.19272	chr8	+	2710	8	FSM	ENSMUSG00000087408.11	ENSMUST00000165819.9	2728	8	3	15	3	-10	multi-exon	FALSE	canonical	3	19	junction_4	3.65892813567591	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTTCCATTGCGTTGG	2361	False	NA	NA	False	NA	NA	NA	70768427	70784227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187_70782927_70783348
tx.19273	chr8	+	3116	7	ISM	ENSMUSG00000087408.11	ENSMUST00000140239.4	2711	8	15	2	15	-2	intron_retention	FALSE	canonical	3	19	junction_4	3.09569593683445	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCGTTGGCGCAGGTG	2385	False	NA	NA	False	NA	NA	NA	70768451	70784235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187
tx.19274	chr8	-	4643	24	FSM	ENSMUSG00000058301.9	ENSMUST00000075666.8	4618	24	-25	0	-25	0	multi-exon	FALSE	canonical	0	0	junction_1	146.934304983882	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	NA	False	NA	NA	NA	70805953	70784174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
tx.19275	chr8	-	4749	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-24	0	intron_retention	TRUE	canonical	3	421	junction_16	57.309367788902	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	NA	False	NA	NA	NA	70805952	70784174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
tx.19276	chr8	-	4610	24	FSM	ENSMUSG00000058301.9	ENSMUST00000215817.2	4518	24	-92	0	-25	0	multi-exon	FALSE	canonical	0	0	junction_1	119.404999372875	687	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	NA	False	NA	NA	NA	70805953	70784174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
tx.19277	chr8	-	5727	14	FSM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	-45	1	-45	-1	multi-exon	FALSE	canonical	3	29	junction_8	14.7616166270428	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCTTCCTCTTTTT	5168	False	NA	NA	False	NA	NA	NA	70892274	70835005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
tx.19278	chr8	-	3176	4	NNC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	22.4251842554055	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGCTCTACGCCTGC	NA	False	NA	NA	False	NA	NA	NA	70929600	70902907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_70905670_70908115_70908299_70928456_70928587_70929499
tx.19279	chr8	-	2903	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	9	-178	-9	0	multi-exon	FALSE	canonical	3	8	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCACCAGTGTGACC	NA	False	NA	NA	False	NA	NA	NA	70929609	70902876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70905670_70929499
tx.1928	chr10	-	3959	12	FSM	ENSMUSG00000035529.11	ENSMUST00000220032.2	3962	12	3	0	3	0	multi-exon	FALSE	canonical	3	39	junction_6	54.6866354713247	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	NA	NA	NA	85752847	85727829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
tx.19280	chr8	-	3087	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	-55	-41	8	0	multi-exon	FALSE	canonical	3	54	junction_2	2	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCACCAGTGTGACC	NA	False	NA	NA	False	NA	NA	NA	70929610	70902876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70905670_70908115_70908299_70929499
tx.19281	chr8	-	3420	5	NNC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	22.9932055181525	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGCCACCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	70929613	70902879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_70905670_70908115_70908299_70928456_70928587_70929019_70929223_70929499
tx.19282	chr8	-	630	4	FSM	ENSMUSG00000058833.12	ENSMUST00000133683.8	632	4	1	1	1	-1	multi-exon	FALSE	canonical	3	147	junction_3	338.518340222013	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCCATCAGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	70959075	70956945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70958941
tx.19283	chr8	-	670	5	FSM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	1	0	1	0	multi-exon	FALSE	canonical	3	754	junction_4	53.0518614188041	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	70959401	70956944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959311
tx.19284	chr8	-	1179	3	FSM	ENSMUSG00000090137.9	ENSMUST00000124967.2	611	3	-403	-165	2	-1	multi-exon	FALSE	canonical	3	22365	junction_1	190	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTGTCTAGAGTGACT	NA	False	NA	NA	False	NA	NA	NA	70962998	70960914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70961179_70961945_70962033_70962170
tx.19285	chr8	-	517	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	194	0	-8	0	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	2656	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	NA	False	NA	NA	NA	70963037	70960912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
tx.19286	chr8	+	1696	9	FSM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	3	-1	3	0	multi-exon	FALSE	canonical	0	0	junction_1	448.998590615828	672	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	70980399	70987977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
tx.19287	chr8	+	3076	12	FSM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	-4	0	-4	0	multi-exon	TRUE	canonical	3	95	junction_2	19.7818683154445	247	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTGGTTTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	70992333	71045508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
tx.19288	chr8	+	1849	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	-11	-2	-3	0	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	429	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTGTGTGCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	71047119	71049940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
tx.19289	chr8	-	1719	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	751	junction_3	214.93682792858	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	71060964	71050139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
tx.1929	chr10	-	1986	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	24	-1	24	1	multi-exon	FALSE	canonical	3	1317	junction_1	96.7988457003782	1379	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTCTCTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	85793663	85774499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
tx.19290	chr8	-	1674	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	intron_retention	TRUE	canonical	3	86	junction_1	344.430828404711	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	71060963	71050139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
tx.19291	chr8	-	1475	17	FSM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	289.200298236361	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	71060964	71050139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
tx.19292	chr8	-	1803	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	981	junction_3	172.790615887482	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	71060964	71050139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
tx.19293	chr8	-	1887	14	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	981	junction_2	167.345795837886	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	71060963	71050139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
tx.19294	chr8	-	1087	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	458	0	458	0	multi-exon	FALSE	canonical	3	308	junction_1	0	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	1473	False	NA	NA	False	NA	NA	NA	71084287	71082042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71082825_71083982
tx.19295	chr8	-	1542	3	FSM	ENSMUSG00000038508.8	ENSMUST00000110103.2	1380	3	-161	-1	-161	0	multi-exon	FALSE	canonical	3	72	junction_2	118	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	493	False	NA	NA	False	NA	NA	NA	71085267	71082042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71082825_71083982_71084275_71084799
tx.19296	chr8	-	5065	5	NNC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	80.0199193951106	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCATCCAGTGTCAC	NA	False	NA	NA	False	NA	NA	NA	71113047	71099086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112734
tx.19297	chr8	-	4852	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	28	3	28	-3	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGCATCCAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	71112360	71099087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
tx.19298	chr8	-	4839	5	NIC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	7	junction_4	81.2603839518372	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	False	NA	NA	False	NA	NA	NA	71113035	71099084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112950
tx.19299	chr8	+	790	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	133	2	2	-2	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	764	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCAGCTGTTCTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	71126030	71131400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
tx.193	chr1	+	3052	5	FSM	ENSMUSG00000026087.12	ENSMUST00000194857.6	501	5	-2379	-172	11	-1	multi-exon	FALSE	canonical	3	895	junction_1	64.9514241568266	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGCTGATGGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	37929634	37937418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
tx.1930	chr10	+	1917	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-73	3544	-73	6	multi-exon	TRUE	canonical	3	208	junction_3	24.7878498462452	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	85857762	85884193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
tx.19300	chr8	+	5141	2	NIC	ENSMUSG00000031848.16	novel	575	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3228	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCAGCTGTTCTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	71126034	71131400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_71130785_71131009
tx.19301	chr8	+	5019	3	NIC	ENSMUSG00000031848.16	novel	636	4	NA	NA	-6	0	intron_retention	FALSE	canonical	3	3228	junction_2	221.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGCCAGCTGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	71126075	71131396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_71130527_71130603_71130785_71131009
tx.19302	chr8	+	851	3	FSM	ENSMUSG00000095026.3	ENSMUST00000213065.2	842	3	-7	-2	-7	2	multi-exon	FALSE	canonical	3	28	junction_1	4.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTCTCACGATTCAGA	NA	False	NA	NA	False	NA	NA	NA	71171184	71175285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71171282_71174425_71174587_71174692
tx.19303	chr8	+	3122	15	NIC	ENSMUSG00000031842.16	novel	3380	18	NA	NA	5990	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_14	1.66598625567009	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTGGAGTGTGGCTAAG	NA	False	NA	NA	False	NA	NA	NA	71182703	71203835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198708_71198832_71198886_71199180_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
tx.19304	chr8	+	1366	5	FSM	ENSMUSG00000031840.15	ENSMUST00000034301.12	1363	5	-8	5	0	-5	multi-exon	FALSE	canonical	3	41	junction_1	7.43303437365925	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCACACGCAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	71207351	71211276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71207513_71208502_71208731_71209093_71209213_71209783_71209909_71210543
tx.19305	chr8	-	1017	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_3	276.99311814556	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	71213588	71211294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_71211671_71211754_71211884_71212036_71212155_71213013_71213185_71213365
tx.19306	chr8	-	991	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	71213603	71211294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
tx.19307	chr8	-	982	7	FSM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	-1	-1	-1	1	multi-exon	FALSE	canonical	3	181	junction_6	19.0065778087482	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTCCTAGAGTTGG	NA	False	NA	NA	False	NA	NA	NA	71219308	71215417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
tx.19308	chr8	-	3159	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	3	3	3	-3	multi-exon	FALSE	canonical	3	127	junction_15	21.8259784049498	329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	NA	False	NA	NA	NA	71229354	71220822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
tx.19309	chr8	-	5238	28	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_24	13.9278958417586	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	NA	False	NA	NA	NA	71257645	71230760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242565_71242640_71242730_71252101_71252134_71257586
tx.1931	chr10	+	1876	9	FSM	ENSMUSG00000001786.15	ENSMUST00000117597.2	1799	9	-72	-5	-64	5	multi-exon	FALSE	canonical	3	31	junction_1	75.1232320923428	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGACTTTTTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	85857988	85884192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_85858195_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
tx.19310	chr8	-	2169	8	FSM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	186	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_5	35.6330504688314	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCGTCTTTTCATTTG	NA	False	NA	NA	False	NA	NA	NA	71292178	71287772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337_71291486_71291622_71291690_71291771
tx.19311	chr8	-	2250	7	ISM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	187	0	-15	0	intron_retention	FALSE	canonical	0	0	junction_5	38.4476556141232	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCGTCTTTTCATTTG	NA	False	NA	NA	False	NA	NA	NA	71292177	71287772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337_71291486_71291622
tx.19312	chr8	-	3344	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-83	-6	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	5.77350269189626	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGATTCTGGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	71315985	71295807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71297206_71299138_71299209_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
tx.19313	chr8	-	882	4	ISM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	3859	-1	3307	1	3prime_fragment	FALSE	canonical	3	521	junction_3	35.4902177445498	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTCTGTATGTGTGG	NA	False	NA	NA	False	NA	NA	NA	71322720	71320869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548
tx.19314	chr8	-	910	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	446	0	-106	0	multi-exon	FALSE	canonical	3	353	junction_4	97.9030132324843	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGTCTGTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	71326133	71320870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
tx.19315	chr8	-	1517	4	ISM	ENSMUSG00000000792.3	ENSMUST00000000809.3	2928	15	4871	-3	4871	3	3prime_fragment	FALSE	canonical	0	0	junction_2	1.4142135623731	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCTGTGGCGTAATCA	NA	False	NA	NA	False	NA	NA	NA	71340530	71335529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71336613_71337564_71337681_71338673_71338799_71340337
tx.19316	chr8	-	603	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	0	657	0	0	multi-exon	FALSE	canonical	3	16397	junction_4	7934.97659101777	2045	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	NA	False	NA	NA	NA	71350056	71348022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
tx.19317	chr8	+	3267	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	49	-2	-1	0	multi-exon	FALSE	canonical	3	269	junction_1	20.5236990384829	518	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	71358624	71370173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
tx.19318	chr8	+	2562	3	ISM	ENSMUSG00000019261.4	ENSMUST00000213083.2	4635	5	7141	1	1316	1	3prime_fragment	FALSE	canonical	3	276	junction_1	27	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	71365777	71370172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_71367639_71368994_71369219_71369695
tx.19319	chr8	-	4422	10	ISM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	591	-1	15	1	intron_retention	FALSE	canonical	3	458	junction_6	25.5420254038006	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	729	False	NA	NA	False	NA	NA	NA	71724987	71703767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869
tx.1932	chr10	+	4615	5	FSM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	107	0	-75	0	multi-exon	FALSE	canonical	2	3	junction_1	4.15331193145904	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGCTGTCTCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	86136342	86185370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_86136839_86174236_86174320_86179796_86179909_86180417_86180540_86181568
tx.19320	chr8	-	1584	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	430	-1	-26	1	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	461	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	568	False	NA	NA	False	NA	NA	NA	71725148	71703767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
tx.19321	chr8	+	998	8	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	331.893577730536	57	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	NA	False	NA	NA	NA	71819554	71822373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820763_71821490_71821522_71821775_71821948_71822170
tx.19322	chr8	+	844	7	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	312.764954345378	60	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	NA	False	NA	NA	NA	71819866	71822375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820763_71821490_71821522_71821775_71821948_71822170
tx.19323	chr8	+	752	6	NNC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	341.95344712402	71	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	NA	False	NA	NA	NA	71820232	71822375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_71820338_71820413_71820493_71820602_71820763_71821490_71821522_71821775_71821948_71822170
tx.19324	chr8	+	1105	4	FSM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	-25	531	16	203	multi-exon	FALSE	canonical	3	42	junction_2	9.2736184954957	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTGCAGCTACCTAAAA	NA	False	NA	NA	False	NA	NA	NA	71823957	71825802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71824630_71825111_71825278_71825392_71825447_71825589
tx.19325	chr8	-	3217	3	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	0	1	intron_retention	FALSE	canonical	3	125	junction_1	11	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGCCTCTGCTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	71834604	71826765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71828918_71831032_71831128_71833634
tx.19326	chr8	-	2221	4	FSM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	1	-4	1	0	multi-exon	FALSE	canonical	3	125	junction_2	9.56846672960488	223	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGCCTCTGCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	71834603	71826766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71827399_71828392_71828918_71831032_71831128_71833634
tx.19327	chr8	+	1360	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	4	69	4	-69	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGTGTCACTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	71849508	71857194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
tx.19328	chr8	+	2377	8	FSM	ENSMUSG00000046295.14	ENSMUST00000124520.8	1935	8	-11	-431	1	3	multi-exon	TRUE	canonical	3	94	junction_7	7.9256751466744	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCTCCATGTCTCA	NA	False	NA	NA	False	NA	NA	NA	71858654	71862551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
tx.19329	chr8	+	2076	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	25.4358875410315	54	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTCTCCATGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	71858654	71862552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
tx.1933	chr10	+	4248	4	ISM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	37870	2	35388	-2	3prime_fragment	FALSE	canonical	3	9	junction_3	2.05480466765633	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTGCTGTCTCTTGCC	NA	False	NA	NA	False	NA	NA	NA	86174105	86185368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_86174320_86179796_86179909_86180417_86180540_86181568
tx.19330	chr8	-	1977	5	FSM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	1	0	1	0	multi-exon	FALSE	canonical	3	51	junction_3	6.41774882649672	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCTCCAATTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	71916298	71909348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889_71914617_71916109
tx.19331	chr8	-	2625	4	NIC	ENSMUSG00000007950.10	novel	1978	5	NA	NA	7	-6	intron_retention	FALSE	canonical	3	51	junction_2	6.84754619472471	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAACTGGCCTCCAATTT	NA	False	NA	NA	False	NA	NA	NA	71916292	71909354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71910899_71911021_71911193_71913889_71914617_71916109
tx.19332	chr8	+	616	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	904	junction_1	0	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTACGTATGTATTAACT	8911	False	NA	NA	False	NA	NA	NA	71917593	71918391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71917712_71917893
tx.19333	chr8	+	1923	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	3	7	3	-7	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	426	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGCCCATCCTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	71921845	71928735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
tx.19334	chr8	-	3833	18	FSM	ENSMUSG00000034863.10	ENSMUST00000213382.2	3785	18	-45	-3	-45	3	multi-exon	FALSE	canonical	0	0	junction_6	9.99273092203912	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAGGTCAGAGCAGTGAA	NA	False	NA	NA	False	NA	NA	NA	71938652	71928659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934262_71934395_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
tx.19335	chr8	-	3715	17	FSM	ENSMUSG00000034863.10	ENSMUST00000093450.6	3653	17	-59	-3	-59	3	multi-exon	FALSE	canonical	3	18	junction_5	6.28987281270456	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAGGTCAGAGCAGTGAA	NA	False	NA	NA	False	NA	NA	NA	71938666	71928659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
tx.19336	chr8	+	2057	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	620	123	2	-123	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTAGTAGCATGTGG	NA	False	NA	NA	False	NA	NA	NA	71941366	71945921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
tx.19337	chr8	+	3869	3	NIC	ENSMUSG00000007610.16	novel	2830	6	NA	NA	-2	-122	intron_retention	FALSE	canonical	3	65	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTAGTAGCATGTGGT	NA	False	NA	NA	False	NA	NA	NA	71941384	71945922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_71944235_71944720_71945000_71945182
tx.19338	chr8	-	1623	4	NNC	ENSMUSG00000034845.7	novel	1987	6	NA	NA	3368	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.01387685344754	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTTTGTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	71961028	71950409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_71951050_71959480_71959563_71959663_71959722_71960185
tx.19339	chr8	-	795	5	FSM	ENSMUSG00000046718.9	ENSMUST00000051672.9	792	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	305	junction_3	21.2176223927187	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGCTTCTAAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	71990103	71986898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_71987125_71987315_71987437_71988429_71988470_71989002_71989079_71989771
tx.1934	chr10	+	1632	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	-6	-4	-6	4	multi-exon	FALSE	canonical	3	71	junction_1	95.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATGTGTATGAGTGTAT	NA	False	NA	NA	False	NA	NA	NA	86521382	86525822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_86521473_86521743_86521861_86524397
tx.19340	chr8	+	1069	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	-7	0	1	0	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	71995566	72000670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
tx.19341	chr8	+	3347	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	37	junction_11	40.1631222502545	52	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	NA	False	NA	NA	NA	72022323	72039946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
tx.19342	chr8	+	3358	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	50.2843995025628	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	NA	False	NA	NA	NA	72022783	72039946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
tx.19343	chr8	+	3313	12	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1666	-594	-62	0	3prime_fragment	FALSE	canonical	1	37	junction_10	35.20847005532	70	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	NA	False	NA	NA	NA	72023236	72039946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
tx.19344	chr8	+	895	5	FSM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	546	junction_2	58.7132864009502	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTCTGTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	72044817	72048913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72048700
tx.19345	chr8	+	1159	5	FSM	ENSMUSG00000031807.11	ENSMUST00000143441.2	1062	5	-99	2	8	-2	multi-exon	FALSE	canonical	3	15	junction_1	254.639941878724	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGTTTCTGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	72044835	72048911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72045433_72046727_72046836_72047312_72047415_72047704_72047846_72048700
tx.19346	chr8	+	2468	4	NIC	ENSMUSG00000031807.11	novel	1062	5	NA	NA	4	0	intron_retention	FALSE	canonical	3	546	junction_1	55.9185916211137	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTCTGTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	72044823	72048913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_72046836_72047312_72047415_72047704_72047846_72048700
tx.19347	chr8	+	3051	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	154	2	-19	-2	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	1413	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	NA	False	NA	NA	NA	72063795	72077553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
tx.19348	chr8	+	3858	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	838	junction_7	59.7648726259832	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	NA	False	NA	NA	NA	72063796	72077555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
tx.19349	chr8	+	1615	2	ISM	ENSMUSG00000034807.10	ENSMUST00000212706.2	2860	4	2415	-2	2415	2	3prime_fragment	FALSE	canonical	3	971	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCTTTGGGTTTGGTGC	NA	False	NA	NA	False	NA	NA	NA	72075741	72077552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_72075941_72076136
tx.1935	chr10	+	1721	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	-51	-5	35	5	multi-exon	FALSE	canonical	3	53	junction_1	104.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTGTATGAGTGTATT	NA	False	NA	NA	False	NA	NA	NA	86521423	86525823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_86521602_86521743_86521861_86524397
tx.19350	chr8	-	939	8	FSM	ENSMUSG00000034799.17	ENSMUST00000176777.8	944	8	0	5	0	0	multi-exon	FALSE	canonical	2	5	junction_3	16.3682120998886	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGTGTGTTATATATAACA	NA	False	NA	NA	False	NA	NA	NA	72124385	72112989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_72113294_72114462_72114496_72115124_72115180_72115483_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
tx.19351	chr8	+	3551	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	209	249	-47	-249	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGCGGTTGTCAGCA	NA	False	NA	NA	False	NA	NA	NA	72129148	72140951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
tx.19352	chr8	+	3816	25	FSM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	203	0	-53	0	multi-exon	TRUE	canonical	3	125	junction_24	33.9656689418399	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	72129142	72143219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
tx.19353	chr8	+	3178	16	NIC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1726	-223	intron_retention	FALSE	canonical	3	157	junction_3	27.8684209974101	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTACTGGCACGT	NA	False	NA	NA	False	NA	NA	NA	72132704	72140977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
tx.19354	chr8	-	2652	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1747	-454	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	71.5	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	6774	False	NA	NA	False	NA	NA	NA	72156180	72143853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_72145800_72145960_72146544_72156057
tx.19355	chr8	-	2524	2	ISM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	7896	453	7896	-453	3prime_fragment	FALSE	canonical	3	159	junction_1	0	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGTAATATTTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	72146537	72143852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_72145800_72145960
tx.19356	chr8	-	2641	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-40	454	-40	-454	multi-exon	FALSE	canonical	3	105	junction_2	27	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	8481	False	NA	NA	False	NA	NA	NA	72154473	72143853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_72145800_72145960_72146544_72154361
tx.19357	chr8	+	3238	4	FSM	ENSMUSG00000056019.13	ENSMUST00000188685.7	7186	4	-66	4014	-66	801	multi-exon	FALSE	canonical	3	13	junction_3	3.85861230093008	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGATGTTTATACTGT	NA	False	NA	NA	False	NA	NA	NA	72635796	72645557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72636053_72641107_72641235_72641444_72641506_72642763
tx.19358	chr8	+	2941	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	-20	-1	-20	1	multi-exon	FALSE	canonical	3	55	junction_3	7.78888096369861	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	72676675	72688474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
tx.19359	chr8	+	2869	3	NIC	ENSMUSG00000066880.16	novel	2920	4	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	30	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	72676686	72688474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_72676817_72682045_72682173_72685862
tx.1936	chr10	-	2783	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	42	0	42	0	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	4387	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	NA	False	NA	NA	NA	86541331	86526703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
tx.19360	chr8	+	2707	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	6	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	404	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	NA	False	NA	NA	NA	72704920	72724177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
tx.19361	chr8	+	2646	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	10	-2055	0	0	multi-exon	FALSE	canonical	3	96	junction_2	182.5	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	NA	False	NA	NA	NA	72704920	72724177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72705005_72719637_72719765_72721742
tx.19362	chr8	+	2144	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	10	4	10	-2	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	719	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGGATTTATTCT	NA	False	NA	NA	False	NA	NA	NA	72889082	72906982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
tx.19363	chr8	+	2018	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	23	3	23	-3	multi-exon	FALSE	canonical	3	103	junction_1	228.433708510092	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATTTATTC	NA	False	NA	NA	False	NA	NA	NA	72889674	72906981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
tx.19364	chr8	+	1786	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	141	2623	-18	-2623	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	711	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCCTCCCCTGGAGTC	NA	False	NA	NA	False	NA	NA	NA	72915184	72935125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
tx.19365	chr8	+	1563	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	15	986	15	2	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	474	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTGTGCGTGAAACAG	NA	False	NA	NA	False	NA	NA	NA	72973588	72977276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
tx.19366	chr8	+	1642	3	NIC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	-7	13	intron_retention	FALSE	canonical	3	920	junction_2	39	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAACAGATATATGAGAT	NA	False	NA	-91	True	NA	NA	NA	72973600	72977287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_72973927_72975771_72975826_72976025
tx.19367	chr8	+	2027	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	57	0	-20	0	multi-exon	FALSE	canonical	3	513	junction_9	40.3802177244139	633	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	72993918	73011229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
tx.19368	chr8	+	1513	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	305	29	-305	multi-exon	FALSE	canonical	3	2955	junction_2	16	2521	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	NA	False	NA	NA	NA	73072905	73075195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_73072994_73073269_73074087_73074587
tx.19369	chr8	-	2927	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	80.7011756547953	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	73175304	73094838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.1937	chr10	+	5985	14	NNC	ENSMUSG00000054027.9	novel	5952	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	13.1792377508074	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTTAGACCTATCG	NA	False	NA	NA	False	NA	NA	NA	86614858	86674253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656750_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
tx.19370	chr8	-	2799	22	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	69.7814859566126	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	73175309	73094838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.19371	chr8	-	3139	24	FSM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	-6	-4	-6	4	multi-exon	FALSE	canonical	3	88	junction_2	82.9540606689901	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	73175310	73094838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.19372	chr8	-	3053	24	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-13	4	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	97.7241014284603	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	73175317	73094838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.19373	chr8	-	3012	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-12	4	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	86.0488161471765	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	73175316	73094838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.19374	chr8	-	4366	23	ISM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	-17	3221	-17	1747	5prime_fragment	FALSE	canonical	3	88	junction_1	74.1921923450081	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCAGTGCCGGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	73175321	73098063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.19375	chr8	-	3188	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212950.2	2620	22	-27	-541	-5	541	multi-exon	FALSE	canonical	3	153	junction_1	58.0603720511769	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCCTTAGGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	73175309	73111370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.19376	chr8	-	3388	16	FSM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	-11	-1	-6	1	multi-exon	FALSE	canonical	3	313	junction_2	26.4222128772995	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTTGTTCAGTGTTCCA	NA	False	NA	NA	False	NA	NA	NA	73175310	73131260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.19377	chr8	-	1662	9	FSM	ENSMUSG00000019732.15	ENSMUST00000019876.12	1769	9	117	-10	117	10	multi-exon	FALSE	canonical	3	18	junction_4	4.64858849544676	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGTTTTACTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	73197597	73178009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_73178600_73179610_73179704_73181005_73181138_73181913_73182010_73185216_73185406_73188633_73188729_73192275_73192480_73197238_73197341_73197436
tx.19378	chr8	+	3041	8	NNC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	1	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	27.4694635654107	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTCTGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	73197724	73214384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213256
tx.19379	chr8	+	2409	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	18	460	18	-100	multi-exon	FALSE	canonical	3	59	junction_1	11.7334338276463	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	73197741	73214385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
tx.1938	chr10	+	5945	14	FSM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	3	4	3	-4	multi-exon	FALSE	canonical	3	23	junction_13	8.52632540148867	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTATGTGTGTTAGACCT	NA	False	NA	NA	False	NA	NA	NA	86614871	86674249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
tx.19380	chr8	+	2291	7	ISM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	896	460	844	-100	3prime_fragment	FALSE	canonical	3	61	junction_3	11.6285090283416	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	73198619	73214385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
tx.19381	chr8	-	3707	18	FSM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	86	-147	-5	6	multi-exon	FALSE	canonical	3	416	junction_13	64.9317448394025	472	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	NA	False	NA	NA	NA	73228984	73214326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
tx.19382	chr8	-	4404	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	-21	0	-21	0	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	460	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGAGTTTGGTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	73246479	73234484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
tx.19383	chr8	-	2997	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	3	-3	3	3	multi-exon	FALSE	canonical	3	122	junction_2	2.5	304	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTTGGAATCATTTCT	3620	False	NA	NA	False	NA	NA	NA	73302111	73248401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_73250951_73251366_73251442_73301738
tx.19384	chr8	-	2161	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	27	704	1	-704	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	221	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCTTCTTGGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	73324905	73319735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
tx.19385	chr8	+	2160	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	-38	2	-20	-2	multi-exon	FALSE	canonical	3	40	junction_3	8.51821577561874	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	73325878	73341124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
tx.19386	chr8	+	1972	5	FSM	ENSMUSG00000031791.9	ENSMUST00000211914.2	820	5	-53	-1099	-17	-2	multi-exon	FALSE	canonical	3	7	junction_2	20.2484567313166	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	73325881	73341124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_73326072_73333406_73333564_73335028_73335117_73338543_73338662_73339705
tx.19387	chr8	+	4115	19	FSM	ENSMUSG00000031622.17	ENSMUST00000004494.16	4115	19	2	-2	0	2	multi-exon	FALSE	canonical	3	31	junction_6	282.896831519815	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGGGTCCTTCGTCAT	NA	False	NA	NA	False	NA	NA	NA	73449917	73484831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
tx.19388	chr8	+	4406	18	NIC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	-6	2	intron_retention	TRUE	canonical	3	31	junction_6	288.422988108098	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGGGTCCTTCGTCAT	NA	False	NA	NA	False	NA	NA	NA	73449906	73484831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483681_73483802
tx.19389	chr8	+	1022	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	3	-1	0	1	multi-exon	FALSE	canonical	3	644	junction_5	27.2197844713485	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATGTGCAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	73449915	73466535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
tx.1939	chr10	-	4047	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-26	763	intron_retention	FALSE	canonical	2	6	junction_11	23.4016316447457	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTCCTTTATAAATACT	NA	False	NA	NA	False	NA	NA	NA	87982766	87926530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982441_87982713
tx.19390	chr8	-	4319	15	NNC	ENSMUSG00000004383.19	novel	4746	16	NA	NA	392	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	10.0247143579847	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCTTCTCCCTCCCA	NA	False	NA	NA	False	NA	NA	NA	74079776	73541226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_73542650_73544703_73544958_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
tx.19391	chr8	-	4645	15	FSM	ENSMUSG00000004383.19	ENSMUST00000004497.11	3669	15	-976	0	8	0	multi-exon	FALSE	canonical	2	9	junction_14	8.74000887310996	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCTTCTCCCTCCCA	NA	False	NA	NA	False	NA	NA	NA	74080160	73541226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
tx.19392	chr8	+	3992	12	FSM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	-5	2	-5	-2	multi-exon	FALSE	canonical	3	57	junction_2	21.8858798209528	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAGTCTTAGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	75720301	75758604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
tx.19393	chr8	+	3878	11	FSM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	318	-5	-5	-1	multi-exon	FALSE	canonical	3	15	junction_4	33.0128762757806	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGTCTTAGCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	75720301	75758605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
tx.19394	chr8	+	3885	11	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	24.8185414559357	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGTCTTAGCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	75720305	75758605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
tx.19395	chr8	+	3275	7	ISM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	7165	2	975	-2	3prime_fragment	FALSE	canonical	3	83	junction_1	17.202228537799	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAGTCTTAGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	75727471	75758604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
tx.19396	chr8	+	2266	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	-7	8	-7	-8	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATGATCTGCTCTGGC	NA	False	NA	NA	False	NA	NA	NA	75760325	75796741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
tx.19397	chr8	+	2239	15	NNC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	-2	-12	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	75.3965367580106	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCAGCATGATCTGCTC	NA	False	NA	NA	False	NA	NA	NA	75760330	75796737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778268_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
tx.19398	chr8	+	1572	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	-2	-1	-2	1	multi-exon	FALSE	canonical	0	0	junction_1	104.358456772798	169	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	NA	False	NA	NA	NA	75820246	75827218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
tx.19399	chr8	+	2635	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-27	-4	-20	4	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	595	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	NA	False	NA	NA	NA	75836176	75854325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
tx.194	chr1	+	3962	4	FSM	ENSMUSG00000026087.12	ENSMUST00000195373.2	587	4	-3375	0	17	0	multi-exon	FALSE	canonical	3	1006	junction_1	22.6421435969889	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	37929640	37937419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_37933097_37934410_37934492_37936768_37936916_37937141
tx.1940	chr10	-	3904	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	24	695	intron_retention	FALSE	canonical	3	15	junction_2	20.7605394920267	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATGGATAATAAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	87982771	87926598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
tx.19400	chr8	+	2640	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	-1	742	-1	4	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	1196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	NA	False	NA	NA	NA	75836195	75854325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
tx.19401	chr8	+	2688	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	-27	-8	21	3	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	1183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	NA	False	NA	NA	NA	75836224	75854324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
tx.19402	chr8	-	3064	23	FSM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	20	0	20	0	multi-exon	FALSE	canonical	3	15	junction_7	5.93072961101822	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	78244562	77976994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
tx.19403	chr8	+	2772	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	8	1	-2	0	multi-exon	FALSE	canonical	3	124	junction_5	20.627751506924	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	NA	False	NA	NA	NA	78276033	78307966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
tx.19404	chr8	-	2693	10	FSM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	-11	-4	4	4	multi-exon	FALSE	canonical	3	71	junction_5	10.9927024053615	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTACGTGTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	78337293	78322606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
tx.19405	chr8	-	3266	2	FSM	ENSMUSG00000031688.5	ENSMUST00000034115.5	3204	2	-60	-2	-60	2	multi-exon	FALSE	canonical	2	3	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTTTTAATCATTTAT	NA	False	NA	NA	False	NA	NA	NA	79163334	79159636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_79162308_79162739
tx.19406	chr8	-	1691	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	4	0	4	0	multi-exon	FALSE	canonical	3	249	junction_1	0	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	NA	NA	NA	79235523	79231897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_79233493_79235427
tx.19407	chr8	-	1648	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	-20	-6	-1	-2	multi-exon	FALSE	canonical	3	608	junction_1	0	452	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTGTCTTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	79235528	79231899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_79233447_79235427
tx.19408	chr8	+	3613	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	-16	-2	0	2	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAAATGTCGTGGCT	NA	False	NA	NA	False	NA	NA	NA	79235980	79460634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
tx.19409	chr8	-	4964	4	NIC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	40	-117	intron_retention	FALSE	canonical	3	636	junction_3	248.967199981577	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTAGTCTCCTCGTGGT	NA	False	NA	NA	False	NA	NA	NA	79547729	79533196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_79534875_79536575_79539710_79546615_79546715_79547676
tx.1941	chr10	-	6274	11	FSM	ENSMUSG00000035365.16	ENSMUST00000048518.16	3594	11	33	-2713	25	2713	multi-exon	FALSE	canonical	3	41	junction_10	14.3666279968544	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATACGTTCTCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	87982770	87924580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357
tx.19410	chr8	-	2070	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	21	1701	21	-115	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTAGTCTCCTCGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	79547748	79533194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
tx.19411	chr8	-	1971	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	21	115	21	-115	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTAGTCTCCTCGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	79547748	79533194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
tx.19412	chr8	-	5343	2	FSM	ENSMUSG00000031683.17	ENSMUST00000126174.2	473	2	-3396	-1474	-392	-112	multi-exon	FALSE	canonical	3	1217	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTCCTCGTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	79540235	79533191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_79534875_79536575
tx.19413	chr8	-	1383	7	NIC	ENSMUSG00000037022.4	novel	5650	7	NA	NA	-45	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_5	22.8138603095185	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGAGTTTCCCTGAGT	NA	False	NA	NA	False	NA	NA	NA	80021611	79994534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007809_80008284_80021542
tx.19414	chr8	-	1314	6	ISM	ENSMUSG00000037022.4	ENSMUST00000210231.2	1685	8	13025	-1	13025	1	3prime_fragment	FALSE	canonical	2	9	junction_5	24.0083318870762	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGAGTTTCCCTGAG	NA	False	NA	NA	False	NA	NA	NA	80008284	79994535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007809
tx.19415	chr8	-	3079	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	20	0	20	0	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	246	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTTTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	80126127	80065023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
tx.19416	chr8	+	7618	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	-234	-30	-234	30	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCCATGTATGTT	NA	False	NA	NA	False	NA	NA	NA	80366012	80404383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
tx.19417	chr8	+	7614	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	-320	-81	-234	29	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTTTCCATGTATGT	NA	False	NA	NA	False	NA	NA	NA	80366012	80404382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
tx.19418	chr8	+	7409	21	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-236	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	64.8731647139247	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTGGGATTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	80366010	80404298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391647_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
tx.19419	chr8	-	3550	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	63	180	-7	-180	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	2111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTACCGGTGTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	80438306	80410270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
tx.1942	chr10	-	3233	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	17	20	intron_retention	FALSE	canonical	3	53	junction_4	10.555093557141	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGGCAGACTATATAT	NA	False	NA	NA	False	NA	NA	NA	87982778	87927273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
tx.19420	chr8	+	833	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-50	8	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTCAATCTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	80438398	80501979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
tx.19421	chr8	+	919	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	-34	1916	-34	62	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTCAAGATATATATA	NA	False	NA	NA	False	NA	NA	NA	80438414	80502033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
tx.19422	chr8	+	882	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	-2	3711	-2	6	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGAAGTCAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	80438477	80501977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
tx.19423	chr8	-	8612	13	FSM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	464	-2	464	0	multi-exon	FALSE	canonical	1	1	junction_5	3.65433532488012	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTGCCCTTTTAAA	4770	False	NA	NA	False	NA	NA	NA	80784171	80692479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
tx.19424	chr8	-	3117	14	NIC	ENSMUSG00000064325.5	novel	9074	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	3.68910117177901	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTGCCCTTTTAAA	4296	False	NA	NA	False	NA	NA	NA	80784645	80692479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_80693058_80699026_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
tx.19425	chr8	-	2152	4	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAACGCTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	81095988	81054478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_81056334_81057072_81057172_81087494_81087590_81095885
tx.19426	chr8	-	4645	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	29	1439	29	-1439	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	3480	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTCTTTTCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	81466097	81426574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
tx.19427	chr8	-	4891	10	FSM	ENSMUSG00000031714.10	ENSMUST00000034150.10	4870	10	-17	-4	6	2	multi-exon	FALSE	canonical	3	25	junction_9	135.607913385759	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTGTTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	81607142	81491064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
tx.19428	chr8	-	3962	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21251	4	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	840	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	81585874	81491062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
tx.19429	chr8	-	4683	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	21	3	6	-3	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	261	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCCCTACTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	81741536	81707364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
tx.1943	chr10	-	4129	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	17	763	intron_retention	FALSE	canonical	3	12	junction_11	22.0262803213204	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTCCTTTATAAATACT	NA	False	NA	NA	False	NA	NA	NA	87982778	87926530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982511_87982713
tx.19430	chr8	-	1673	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	3	-1	3	1	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	369	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGGTACTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	83500786	83490248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
tx.19431	chr8	+	5690	21	FSM	ENSMUSG00000031709.16	ENSMUST00000093393.5	5334	21	-351	-5	157	5	multi-exon	TRUE	canonical	2	4	junction_8	3.27528624703246	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTTGTACTTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	83892137	83999568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_83892834_83937049_83937161_83948066_83948186_83960108_83960338_83960740_83961003_83963140_83963349_83966459_83966667_83968166_83968338_83969150_83969302_83976030_83976246_83980086_83980205_83981255_83981542_83982423_83982554_83985623_83985723_83985932_83986002_83987547_83987789_83991475_83991542_83992709_83992797_83995611_83995687_83995772_83995877_83997522
tx.19432	chr8	-	4301	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	14	4	14	-4	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCTTTCTGTGGATGC	8184	False	NA	NA	False	NA	NA	NA	84059101	84039654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
tx.19433	chr8	+	2284	15	NNC	ENSMUSG00000002190.14	novel	2293	15	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	10.2362401420101	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGAGCCAAGAGATTCG	NA	False	NA	NA	False	NA	NA	NA	84116485	84153460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151333_84152153_84152255_84153154
tx.19434	chr8	+	4032	15	FSM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	-21	-1718	-10	-3	multi-exon	FALSE	canonical	3	23	junction_5	6.81834260787527	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATGTGTGTGTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	84116485	84155178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
tx.19435	chr8	-	1789	4	FSM	ENSMUSG00000063253.12	ENSMUST00000212031.2	409	4	-2	-1378	0	1	multi-exon	FALSE	canonical	3	281	junction_1	12.1928941054479	208	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTGTGTTTT	7417	False	NA	NA	False	NA	NA	NA	84169136	84161122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84169050
tx.19436	chr8	+	558	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	65	0	-22	0	multi-exon	FALSE	canonical	3	2087	junction_2	87.5	378	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTGTGCTACTTCAA	NA	False	NA	NA	False	NA	NA	NA	84293364	84298255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84293560_84297458_84297628_84298061
tx.19437	chr8	-	1157	13	FSM	ENSMUSG00000031708.18	ENSMUST00000019382.17	1158	13	3	-2	3	0	multi-exon	FALSE	canonical	3	3555	junction_3	302.48290814891	1494	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	False	NA	NA	False	NA	NA	NA	84321103	84298326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
tx.19438	chr8	-	1112	12	FSM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	10	-2	3	0	multi-exon	FALSE	canonical	3	487	junction_9	1051.54616581631	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	False	NA	NA	False	NA	NA	NA	84321103	84298326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
tx.19439	chr8	+	2204	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	42	750	42	-750	multi-exon	FALSE	canonical	3	562	junction_2	45.5	604	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCAGTCCTTCGACTC	NA	False	NA	NA	False	NA	NA	NA	84334863	84338532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84335172_84336442_84337024_84337217
tx.1944	chr10	+	1261	10	FSM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	9	-3	9	3	multi-exon	FALSE	canonical	3	484	junction_1	64.7921653547559	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCTATTGTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	87982862	88014255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
tx.19440	chr8	+	1616	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	2	-96	2	96	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	854	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCTCTCCCTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	84379307	84391419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
tx.19441	chr8	-	2999	22	FSM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	-3	-1	-3	1	multi-exon	FALSE	canonical	3	45	junction_21	57.6705790816251	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	84420692	84396718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84420588
tx.19442	chr8	-	3103	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	4	3555	4	0	multi-exon	FALSE	canonical	3	231	junction_13	29.0604187256126	488	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGCCTCTGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	84425804	84396719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
tx.19443	chr8	-	7020	21	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	0	0	intron_retention	TRUE	canonical	3	231	junction_12	28.1539961639551	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTGGAAAATGTGAGC	NA	False	NA	NA	False	NA	NA	NA	84425796	84393164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
tx.19444	chr8	+	1524	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	61	71	-30	2	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	1374	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGCTCCAGCCCCATC	NA	False	NA	NA	False	NA	NA	NA	84441866	84449906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
tx.19445	chr8	+	1427	10	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	3836	71	-229	2	3prime_fragment	FALSE	canonical	3	2216	junction_4	99.6272063590743	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGCTCCAGCCCCATC	NA	False	NA	NA	False	NA	NA	NA	84446012	84449906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
tx.19446	chr8	-	2914	18	FSM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	72	0	-71	0	multi-exon	FALSE	canonical	2	28	junction_14	43.193056599508	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAGCTTTGGAACAATA	NA	False	NA	NA	False	NA	NA	NA	84467883	84449879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
tx.19447	chr8	-	2976	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-103	-6	50	4	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGCTGGTGAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	84467905	84449986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
tx.19448	chr8	-	3246	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	-132	-114	25	3	multi-exon	FALSE	canonical	3	18	junction_16	54.4176930653952	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCTTTGGAACAATAAAA	NA	False	NA	NA	False	NA	NA	NA	84467930	84449876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
tx.19449	chr8	+	8167	23	FSM	ENSMUSG00000013033.17	ENSMUST00000141158.8	8181	23	-1	15	-1	-15	multi-exon	FALSE	canonical	3	37	junction_4	11.1024530086786	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTGAAATGATAGAGTG	3071	False	NA	NA	False	NA	NA	NA	84626732	84668568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
tx.1945	chr10	+	1301	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	-20	-4	-20	2	multi-exon	FALSE	canonical	3	51	junction_1	172.048514547568	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTCCTATTGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	87982918	88014254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
tx.19450	chr8	+	5393	14	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	8389	-1938	-2037	-5	3prime_fragment	FALSE	canonical	3	55	junction_2	7.48805755300797	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGAGTGGTGTGATCAA	1219	False	NA	NA	False	NA	NA	NA	84659168	84668578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
tx.19451	chr8	+	5017	12	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	9371	-1933	-1055	-10	3prime_fragment	FALSE	canonical	3	60	junction_8	6.37920174285412	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGATAGAGTGGTGTG	2201	False	NA	NA	False	NA	NA	NA	84660150	84668573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
tx.19452	chr8	+	1600	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	186	2	-21	-2	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	323	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTTTGCTTTTTTCTC	5902	False	NA	NA	False	NA	NA	NA	84682321	84696824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
tx.19453	chr8	+	2300	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	-25	1	-25	-1	multi-exon	FALSE	canonical	3	651	junction_8	27.9342260972865	692	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCGCTGGTTTTCCCG	427	False	NA	NA	False	NA	NA	NA	84699596	84723071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
tx.19454	chr8	+	2157	5	FSM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	114	-6	114	6	multi-exon	FALSE	canonical	3	513	junction_1	22.3941956765587	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTTCTGTATGGAGG	1182	False	NA	NA	False	NA	NA	NA	84724243	84727044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
tx.19455	chr8	-	992	4	NIC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	7	-7	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	63.754738385995	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGCTTCAGTGCAAGC	7542	False	NA	NA	False	NA	NA	NA	84738778	84736857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_84737122_84737339_84737402_84737769_84738400_84738742
tx.19456	chr8	-	1342	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	3	6	1	-6	multi-exon	FALSE	canonical	3	145	junction_2	17	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7536	False	NA	NA	False	NA	NA	NA	84738784	84736856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84737122_84737339_84737402_84737769
tx.19457	chr8	-	1024	4	NIC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	-31	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	68.8250600354906	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7489	False	NA	NA	False	NA	NA	NA	84738831	84736856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_84737122_84737339_84737402_84737769_84738378_84738742
tx.19458	chr8	-	1694	2	ISM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	19	6	17	-6	intron_retention	FALSE	canonical	3	179	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7552	False	NA	NA	False	NA	NA	NA	84738768	84736856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_84737122_84737339
tx.19459	chr8	+	4095	2	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	0	8	intron_retention	FALSE	canonical	3	101	junction_1	0	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	NA	False	NA	NA	NA	84752703	84756932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_84754801_84754934
tx.1946	chr10	+	860	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	43	149	-10	2	multi-exon	FALSE	canonical	3	318	junction_4	34.2377309736236	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	NA	False	NA	NA	NA	88036997	88081871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
tx.19460	chr8	+	2468	5	ISM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	4608	-8	4	8	3prime_fragment	FALSE	canonical	3	94	junction_2	4.49305018890286	84	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	NA	False	NA	NA	NA	84752707	84756932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
tx.19461	chr8	-	2667	14	FSM	ENSMUSG00000005465.10	ENSMUST00000005601.9	2664	14	1	-4	1	4	multi-exon	FALSE	canonical	3	16	junction_12	6.10848667572056	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGTGCCTTAACATTT	5260	False	NA	69	True	NA	NA	NA	84769217	84756918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84757822_84757941_84758051_84758147_84758239_84758645_84758772_84760579_84760739_84760820_84760923_84762713_84762903_84762991_84763176_84765924_84765999_84766106_84766264_84767302_84767461_84767560_84767719_84768715_84768834_84769078
tx.19462	chr8	-	934	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	-31	-269	-31	269	multi-exon	FALSE	canonical	3	87	junction_1	0	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACGCGTGCGTATCAT	2817	False	NA	NA	False	NA	NA	NA	84771660	84769288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84769961_84771398
tx.19463	chr8	+	3832	20	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	11.873058960768	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTGATGACGAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	84793466	84823622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
tx.19464	chr8	+	4177	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	2	-7	2	7	multi-exon	FALSE	canonical	3	25	junction_6	9.14002188181188	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACGAGAGCAGGGTTAG	NA	False	NA	NA	False	NA	NA	NA	84793466	84823628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
tx.19465	chr8	-	2210	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	-13	2	-8	-2	multi-exon	FALSE	canonical	3	169	junction_7	21.0218140669797	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGTCCTGTTCT	9249	False	NA	NA	False	NA	NA	NA	84831405	84823702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
tx.19466	chr8	-	3430	29	FSM	ENSMUSG00000036686.17	ENSMUST00000040383.9	3471	29	32	9	-7	0	multi-exon	TRUE	canonical	3	61	junction_17	12.7601500215095	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCAGCTTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	84874533	84859465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
tx.19467	chr8	+	2488	9	FSM	ENSMUSG00000008129.15	ENSMUST00000118856.8	2366	9	-123	1	11	0	multi-exon	FALSE	canonical	2	9	junction_1	4.49826355386165	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGATCTGTAGCTGT	1894	False	NA	NA	False	NA	NA	NA	84874664	84899218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
tx.19468	chr8	-	2522	5	ISM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	13573	270	13573	-270	3prime_fragment	FALSE	canonical	3	31	junction_1	1.22474487139159	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAGACTGGGTTGCATT	NA	False	NA	NA	False	NA	NA	NA	84950111	84937576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848
tx.19469	chr8	-	4394	14	FSM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	-37	268	-37	-268	multi-exon	TRUE	canonical	3	19	junction_10	5.27694550342846	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACTGGGTTGCATTGC	6049	False	NA	NA	False	NA	NA	NA	84963721	84937574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
tx.1947	chr10	+	862	7	FSM	ENSMUSG00000020056.17	ENSMUST00000182183.8	838	7	-21	-3	-15	2	multi-exon	FALSE	canonical	3	113	junction_4	103.215658803411	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	NA	False	NA	NA	NA	88036992	88081871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081617
tx.19470	chr8	-	619	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	0	-3	0	3	multi-exon	FALSE	canonical	3	1764	junction_2	46	134	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	9834	False	NA	NA	False	NA	NA	NA	84976348	84972863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84973323_84976102_84976159_84976244
tx.19471	chr8	-	618	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	1	-3	1	3	multi-exon	FALSE	canonical	3	1764	junction_2	46	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	9835	False	NA	NA	False	NA	NA	NA	84976347	84972863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84973323_84976102_84976159_84976244
tx.19472	chr8	-	1211	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	34	1574	34	-458	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATCTTCACCCACACTC	7000	False	NA	NA	False	NA	NA	NA	84983919	84978108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
tx.19473	chr8	-	1582	9	ISM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	3303	501	-239	5	3prime_fragment	FALSE	canonical	3	198	junction_2	18.3847763108502	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTCTAAACTCATCT	NA	False	NA	NA	False	NA	NA	NA	84993706	84984924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464
tx.19474	chr8	-	1629	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	-12	502	-12	4	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTTTCTAAACTCATC	NA	False	NA	NA	False	NA	NA	NA	84997021	84984925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
tx.19475	chr8	-	1471	9	FSM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	-29	-1	4	1	multi-exon	FALSE	canonical	3	13	junction_1	76.6823806359714	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	NA	False	NA	NA	NA	84997005	84984928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_84985556_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
tx.19476	chr8	+	1969	7	NIC	ENSMUSG00000034656.19	novel	2941	16	NA	NA	-9220	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	6.02771377334171	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACTTCTGAACTAGAGTG	NA	False	NA	NA	False	NA	NA	NA	85356399	85366876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
tx.19477	chr8	-	4232	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_4	190.539864595312	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	NA	False	NA	NA	NA	85414500	85397107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414303
tx.19478	chr8	-	4215	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	NA	False	NA	NA	NA	85413775	85397107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
tx.19479	chr8	-	3993	5	ISM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	10773	0	-134	0	3prime_fragment	FALSE	canonical	3	507	junction_4	58.4486954516523	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	4259	False	NA	NA	False	NA	NA	NA	85403758	85397107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969
tx.1948	chr10	+	5281	21	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	16	4	intron_retention	FALSE	canonical	2	9	junction_12	52.1003598835939	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	NA	False	NA	NA	NA	88215103	88283186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
tx.19480	chr8	-	4305	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	39	0	39	0	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	978	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	NA	False	NA	NA	NA	85414492	85397107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
tx.19481	chr8	+	2110	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	28	0	3	0	multi-exon	FALSE	canonical	3	116	junction_1	116.091541869983	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	NA	False	NA	NA	NA	85415903	85426416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
tx.19482	chr8	+	2136	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	410	21	4	0	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	NA	False	NA	NA	NA	85415904	85426416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
tx.19483	chr8	+	2033	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	12	-1	4	0	multi-exon	FALSE	canonical	3	38	junction_1	132.785409001705	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	NA	False	NA	NA	NA	85415904	85426416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
tx.19484	chr8	+	2060	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	113.375964714749	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	NA	False	NA	NA	NA	85415904	85426416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
tx.19485	chr8	+	1731	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	752	11	752	-11	multi-exon	FALSE	canonical	3	736	junction_1	0	300	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGTTATATATATATATA	3426	False	NA	NA	False	NA	NA	NA	85558902	85562100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85559270_85560736
tx.19486	chr8	-	1810	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	-13	277	11	-18	multi-exon	FALSE	canonical	3	805	junction_3	189.238440862315	768	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	NA	False	NA	NA	NA	85567283	85561557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
tx.19487	chr8	-	1813	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	11	18	11	-18	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	534	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	NA	False	NA	NA	NA	85567283	85561557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
tx.19488	chr8	-	3426	7	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-4	-16	intron_retention	TRUE	canonical	3	614	junction_1	278.433365257989	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTCATGCCTACTGG	NA	False	NA	NA	False	NA	NA	NA	85567274	85561555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
tx.19489	chr8	-	1876	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	67	241	-37	-241	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	1298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	85573496	85568719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
tx.1949	chr10	+	5269	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	41	1	intron_retention	FALSE	canonical	0	0	junction_5	53.4566179251924	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	NA	False	NA	NA	NA	88215034	88283183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250295_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
tx.19490	chr8	+	1824	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	2	0	2	0	multi-exon	FALSE	canonical	3	551	junction_9	56.0676055212713	671	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	85583619	85595886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
tx.19491	chr8	+	614	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	11	60	11	-50	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	85598832	85614025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
tx.19492	chr8	+	1202	4	NIC	ENSMUSG00000003824.13	novel	929	5	NA	NA	43	-50	intron_retention	FALSE	canonical	3	1047	junction_1	431.92772029074	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	85598864	85614025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85599462_85610059_85610214_85612563_85612753_85613763
tx.19493	chr8	+	766	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	95	825	13	-50	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	233	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	85598834	85614025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
tx.19494	chr8	+	1074	3	NIC	ENSMUSG00000003824.13	novel	685	4	NA	NA	17	-50	intron_retention	FALSE	canonical	3	832	junction_1	576	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	85598838	85614025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85599462_85612563_85612753_85613763
tx.19495	chr8	-	1844	11	FSM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	135	188	135	-188	multi-exon	FALSE	canonical	3	233	junction_6	21.1293634546808	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	NA	False	NA	NA	NA	85620411	85613209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
tx.19496	chr8	-	1889	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	37	188	33	-188	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	NA	False	NA	NA	NA	85620513	85613209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
tx.19497	chr8	+	1850	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	89	-224	2	-15	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTGCATGGCACTGG	NA	False	NA	NA	False	NA	NA	NA	85635277	85638322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
tx.19498	chr8	+	1168	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-47	-3	-47	3	multi-exon	FALSE	canonical	3	99	junction_1	1.5	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGAGTGGGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	85639972	85649547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85640158_85647022_85647134_85648675
tx.19499	chr8	+	730	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-53	-12	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAATAAGCCTTTTC	NA	False	NA	NA	False	NA	NA	NA	85639966	85641138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_85640158_85640599
tx.195	chr1	-	1078	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	100	2203	9	2	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGTCTGTTTTTAATC	NA	False	NA	NA	False	NA	NA	NA	38036296	38026472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
tx.1950	chr10	+	5192	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	7	1	intron_retention	FALSE	canonical	3	18	junction_15	49.5912290632124	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	NA	False	NA	NA	NA	88215094	88283183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
tx.19500	chr8	+	636	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4620	12	-50	-12	3prime_fragment	FALSE	canonical	3	74	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAATAAGCCTTTTC	NA	False	NA	NA	False	NA	NA	NA	85639969	85641138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_85640158_85640690
tx.19501	chr8	-	1732	10	FSM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	195	1054	36	3	multi-exon	FALSE	canonical	3	62	junction_9	446.653979919331	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGAGTGCTTTGTGGCTA	4749	False	NA	NA	False	NA	NA	NA	85696174	85684292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914
tx.19502	chr8	-	1044	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-57	1057	-4	0	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	472	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	8226	False	NA	NA	False	NA	NA	NA	85692697	85684295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
tx.19503	chr8	-	1948	10	NIC	ENSMUSG00000052926.17	novel	1532	11	NA	NA	5	0	intron_retention	FALSE	canonical	3	9	junction_9	457.889387688801	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	4718	False	NA	NA	False	NA	NA	NA	85696205	85684295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695726
tx.19504	chr8	+	945	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	38	517	38	6	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	1189	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	85696277	85700946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
tx.19505	chr8	+	2598	22	FSM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	-18	0	-4	0	multi-exon	FALSE	canonical	3	335	junction_11	39.7071479254288	338	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	NA	False	NA	NA	NA	85717227	85729978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
tx.19506	chr8	+	2598	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-8	-1	intron_retention	TRUE	canonical	3	109	junction_18	72.710434300971	72	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	NA	False	NA	NA	NA	85717223	85729977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
tx.19507	chr8	+	192	2	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGAAGCGGGTACCAG	280	False	NA	NA	False	NA	NA	NA	85731099	85731778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_+_85731272_85731758
tx.19508	chr8	-	1313	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	109	junction_5	750.461950327189	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8408	False	NA	NA	False	NA	NA	NA	85751902	85744559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746603_85750806_85750955_85751733
tx.19509	chr8	-	1258	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	-2	0	-2	0	multi-exon	FALSE	canonical	1	664	junction_3	477.58303524681	1192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8398	False	NA	NA	False	NA	NA	NA	85751912	85744559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
tx.1951	chr10	+	5381	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	1	8	1	1	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	385	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	NA	False	NA	NA	NA	88215088	88283183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
tx.19510	chr8	+	891	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	11	0	11	0	multi-exon	FALSE	canonical	3	920	junction_1	163	359	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	85753462	85756915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85753864_85756167_85756246_85756503
tx.19511	chr8	+	3158	2	NIC	ENSMUSG00000041203.10	novel	902	3	NA	NA	47	-1	intron_retention	FALSE	canonical	3	1246	junction_1	0	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGCTTGGTTTATCT	NA	False	NA	NA	False	NA	NA	NA	85753498	85756914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85756246_85756503
tx.19512	chr8	+	4866	25	FSM	ENSMUSG00000031691.15	ENSMUST00000093360.12	4863	25	-3	0	-3	0	multi-exon	TRUE	canonical	3	89	junction_1	89.272513111384	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	NA	False	NA	NA	NA	85763540	85784209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
tx.19513	chr8	+	4825	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_20	83.055035301232	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	85763541	85784212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
tx.19514	chr8	+	4837	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	70.9023193477399	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	85763542	85784212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
tx.19515	chr8	+	4794	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	140	junction_1	62.568282144834	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	85763542	85784212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
tx.19516	chr8	+	4937	25	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	92.5778951298131	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	85763786	85784212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
tx.19517	chr8	+	4892	25	FSM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	-8	0	-8	0	multi-exon	FALSE	canonical	3	53	junction_1	94.0795227306252	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	85763788	85784212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
tx.19518	chr8	+	4847	25	FSM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	7	-1913	7	0	multi-exon	FALSE	canonical	3	53	junction_1	77.0544540496452	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	85763803	85784212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
tx.19519	chr8	+	4878	25	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	75.1550134167154	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	85763815	85784212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
tx.1952	chr10	+	5273	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	22	1	intron_retention	FALSE	canonical	3	11	junction_9	51.1677632890084	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	NA	False	NA	NA	NA	88215109	88283183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265416_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
tx.19520	chr8	+	5431	24	ISM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	509	-1913	-40	0	3prime_fragment	FALSE	canonical	3	298	junction_6	39.1204818260036	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	85764305	85784212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
tx.19521	chr8	+	1942	9	FSM	ENSMUSG00000008167.15	ENSMUST00000139721.8	1993	9	48	3	7	0	multi-exon	FALSE	canonical	3	68	junction_1	8.18535277187245	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	85786732	85793750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
tx.19522	chr8	+	1859	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	48	0	6	0	multi-exon	TRUE	canonical	3	54	junction_4	11.5864970366477	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	85786731	85793750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
tx.19523	chr8	+	1335	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	-2	0	-2	0	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	85798383	85801791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
tx.19524	chr8	-	1198	9	FSM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	40	0	-3	0	multi-exon	FALSE	canonical	3	89	junction_6	13.3410784796432	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTCTTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	85807335	85801663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
tx.19525	chr8	+	689	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	227	6	-6	1	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCACTGTTGCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	85807595	85808962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
tx.19526	chr8	+	3170	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	-41	693	4	-693	multi-exon	FALSE	canonical	3	158	junction_7	31.1019422681999	305	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCACCCAGTGCACTATC	NA	False	NA	NA	False	NA	NA	NA	85809902	85824218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
tx.19527	chr8	-	3189	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	285	0	-48	0	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	2331	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	86026146	85987020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
tx.19528	chr8	+	4130	5	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-10	1	intron_retention	FALSE	canonical	3	972	junction_1	49.469687688523	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTGTATGAGTATT	NA	False	NA	NA	False	NA	NA	NA	86026250	86034701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
tx.19529	chr8	+	1196	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	95	-4	-37	4	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	437	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTATGAGTATTTTG	NA	False	NA	NA	False	NA	NA	NA	86026514	86034704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
tx.1953	chr10	+	3374	9	ISM	ENSMUSG00000035311.17	ENSMUST00000151273.8	5297	20	54028	-1	-109	1	3prime_fragment	FALSE	canonical	3	194	junction_7	15.5638804608619	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	NA	False	NA	NA	NA	88269113	88283183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
tx.19530	chr8	-	1482	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	10	95	-2	-95	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTAGTGTGGTGTAG	NA	False	NA	NA	False	NA	NA	NA	86159452	86135482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
tx.19531	chr8	-	3706	3	NIC	ENSMUSG00000036934.10	novel	1587	4	NA	NA	5	-98	intron_retention	FALSE	canonical	3	281	junction_2	9.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATTAAGTAGTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	86159457	86135485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_86138925_86153488_86153586_86159287
tx.19532	chr8	+	3637	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	1600	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	False	NA	NA	False	NA	NA	NA	86219206	86254189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
tx.19533	chr8	-	2289	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	0	630	0	-630	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	764	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTCTCATTAAGTTGA	NA	False	NA	NA	False	NA	NA	NA	86281973	86264891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
tx.19534	chr8	-	1620	7	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	2005	993	127	-993	3prime_fragment	FALSE	canonical	3	694	junction_1	59.8843793395981	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTCACATTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	86279968	86265254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815
tx.19535	chr8	-	4112	8	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	-7	7	-7	-7	intron_retention	FALSE	canonical	3	694	junction_1	55.8894681765825	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGTTCCTCAGCATT	NA	False	NA	NA	False	NA	NA	NA	86281980	86264268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545
tx.19536	chr8	-	3304	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	2	0	2	0	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	402	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACGCTGTGGCAAG	NA	False	NA	NA	False	NA	NA	NA	86567548	86444206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
tx.19537	chr8	+	4619	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	21.9062423691205	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	86567611	86787271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
tx.19538	chr8	+	4630	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	-13	734	-2	1	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	86567617	86787271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
tx.19539	chr8	+	4608	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	23.8918391755081	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	86567617	86787271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_86567733_86569654_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
tx.1954	chr10	+	1207	8	FSM	ENSMUSG00000020059.10	ENSMUST00000125612.2	1169	8	-38	0	-38	0	multi-exon	FALSE	canonical	3	104	junction_4	7.98212288268514	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	NA	False	NA	NA	NA	88295487	88309098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537
tx.19540	chr8	+	4513	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.2166379903478	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	86567626	86787272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_86567733_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
tx.19541	chr8	+	4692	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	30.84080533056	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	86567617	86787271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_86567733_86569632_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
tx.19542	chr8	+	2835	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	27	-3	27	2	multi-exon	TRUE	canonical	3	174	junction_5	34.038693468775	258	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGTCTCCAGTGGGT	NA	False	NA	NA	False	NA	NA	NA	87350698	87443262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
tx.19543	chr8	-	2148	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	-106	-74	-106	74	multi-exon	FALSE	canonical	3	375	junction_1	0	446	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTTACTTTAGC	NA	False	NA	NA	False	NA	NA	NA	87472668	87450560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_87452485_87472444
tx.19544	chr8	-	5954	6	ISM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	23227	-1	-9611	1	3prime_fragment	FALSE	canonical	3	315	junction_2	34.9433827784317	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGAGGGTGGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	87588659	87567765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053
tx.19545	chr8	-	6037	3	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	166.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCTGGAGGGTGGTGCT	NA	False	NA	NA	False	NA	NA	NA	87611899	87567767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_87571670_87587053_87588739_87611449
tx.19546	chr8	-	6478	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	658	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGAGGGTGGTGCTT	NA	False	NA	NA	False	NA	NA	NA	87611895	87567766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
tx.19547	chr8	-	2316	3	FSM	ENSMUSG00000031654.17	ENSMUST00000034076.16	2800	3	25	459	25	3	multi-exon	FALSE	canonical	3	8	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACGCTGACCCTGTGTT	125	False	NA	NA	False	NA	NA	NA	88199212	88195491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_88197080_88198319_88198440_88198604
tx.19548	chr8	+	520	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182174.8	498	4	-21	-1	-21	0	multi-exon	FALSE	canonical	3	132	junction_1	31.0590834807897	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	177	False	NA	NA	False	NA	NA	NA	88199418	88252182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88252042
tx.19549	chr8	+	1127	2	NIC	ENSMUSG00000097248.10	novel	1303	2	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGCAGGATGTCT	210	False	NA	NA	False	NA	NA	NA	88199744	88230602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_88199859_88229589
tx.1955	chr10	+	1081	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	59	-1	-36	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	NA	False	NA	NA	NA	88295489	88309098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
tx.19550	chr8	+	1735	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	0	-4	0	0	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGGTTAGAGATTTTCT	NA	False	NA	NA	False	NA	NA	NA	88845396	88861738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
tx.19551	chr8	+	1347	6	NIC	ENSMUSG00000036810.17	novel	728	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	70.6070817977914	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTTTATT	NA	False	NA	NA	False	NA	NA	NA	88845413	88858315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88857363
tx.19552	chr8	+	3248	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	3	0	2	0	multi-exon	FALSE	canonical	3	239	junction_7	19.6926641267291	578	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTCATACAGATT	NA	False	NA	NA	False	NA	NA	NA	88864485	88898655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
tx.19553	chr8	+	4557	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.4849676057116	34	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	NA	False	NA	NA	NA	88925812	88986350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
tx.19554	chr8	+	4669	13	FSM	ENSMUSG00000036779.13	ENSMUST00000119033.8	4624	13	-45	0	-45	0	multi-exon	FALSE	canonical	3	15	junction_1	34.7235110871902	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	NA	False	NA	NA	NA	88925795	88986350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_88925942_88926558_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
tx.19555	chr8	+	4548	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.4717219141608	35	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	NA	False	NA	NA	NA	88925818	88986350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_88925942_88926656_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
tx.19556	chr8	+	4429	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	44.0286365145837	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTGCCTGCTCAT	NA	False	NA	NA	False	NA	NA	NA	88925798	88986349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
tx.19557	chr8	+	4955	12	ISM	ENSMUSG00000036779.13	ENSMUST00000118952.8	4597	13	288	-3	288	3	3prime_fragment	FALSE	canonical	3	98	junction_5	15.7967461865615	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCCTGCTCATTTGT	NA	False	NA	NA	False	NA	NA	NA	88926129	88986353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
tx.19558	chr8	-	2372	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	1	1252	1	476	multi-exon	TRUE	canonical	3	463	junction_12	36.2439650148821	567	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	NA	False	NA	NA	NA	89088821	89058938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
tx.19559	chr8	-	2674	16	NIC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	33	473	intron_retention	FALSE	canonical	3	463	junction_11	32.0534276204936	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGCTGGTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	89088789	89058941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
tx.1956	chr10	-	3430	8	NIC	ENSMUSG00000060002.15	novel	1447	9	NA	NA	6	-1285	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	81.7215281505755	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATATGGAGGAGTTAAAA	4130	False	NA	NA	False	NA	NA	NA	88339826	88306660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_88308847_88311194_88311399_88312209_88312336_88312871_88313031_88318092_88318178_88324243_88324386_88325442_88325591_88339446
tx.19560	chr8	+	3073	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	-39	1	-39	-1	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCTGTTTCACATCCT	NA	False	NA	NA	False	NA	NA	NA	89247942	89320245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
tx.19561	chr8	+	4621	13	FSM	ENSMUSG00000055994.16	ENSMUST00000118370.8	4653	13	30	2	30	-2	multi-exon	TRUE	canonical	0	0	junction_7	1.42156017576933	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTTACTGAAGCTCT	NA	False	NA	NA	False	NA	NA	NA	89373972	89415100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_89374038_89379492_89379960_89387166_89387273_89390325_89392142_89397038_89397123_89397290_89397375_89399302_89399387_89401533_89401618_89402074_89402159_89408241_89408326_89411073_89411158_89413257_89413924_89414187
tx.19562	chr8	+	4005	15	NIC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	2	30	combination_of_known_junctions	TRUE	canonical	3	18	junction_6	14.0152977645347	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACTTTACTCCTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	89423657	89475113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
tx.19563	chr8	+	4669	18	FSM	ENSMUSG00000036712.16	ENSMUST00000211554.2	4638	18	1	-32	1	32	multi-exon	FALSE	canonical	3	5	junction_1	16.8699483019167	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTACTCCTTGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	89423675	89475115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_89423728_89428932_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
tx.19564	chr8	+	4538	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	-28	-34	0	34	multi-exon	FALSE	canonical	3	35	junction_1	10.7172466146861	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTCCTTGGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	89423674	89475117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
tx.19565	chr8	+	4760	18	NNC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	2	33	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.5195392649283	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTACTCCTTGGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	89423676	89475116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_89423822_89428935_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
tx.19567	chr8	+	4673	17	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-2	101	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	15.119833828452	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCGTCCATCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	89423700	89475184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_89423822_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
tx.19569	chr8	-	4456	2	ISM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	11340	7	11340	-7	3prime_fragment	FALSE	canonical	3	240	junction_1	0	47	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATATTGTGTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	89759450	89753869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_89755447_89756571
tx.1957	chr10	-	1469	9	FSM	ENSMUSG00000060002.15	ENSMUST00000117440.8	4863	9	95	3299	-8	4	multi-exon	FALSE	canonical	3	79	junction_1	46.4837001001426	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATATTTCTGCAATATAA	4116	False	NA	NA	False	NA	NA	NA	88339840	88308674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_88308847_88311287_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
tx.19570	chr8	-	5554	3	ISM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	1285	11	1285	-11	3prime_fragment	FALSE	canonical	3	240	junction_1	16.5	260	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACATATTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	89769505	89753873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_89755447_89756571_89760027_89768979
tx.19571	chr8	-	5183	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	628	-8	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	100.141011689628	42	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACATATTGTGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	89770162	89753870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89770103
tx.19572	chr8	-	3398	7	FSM	ENSMUSG00000043668.14	ENSMUST00000109621.10	3356	7	-40	-2	-40	2	multi-exon	FALSE	canonical	2	4	junction_1	2.82842712474619	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTCCCTTGACTAC	NA	False	NA	NA	False	NA	NA	NA	91075011	90973665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_90975646_90979279_90979361_90980902_90981131_90984502_90984773_90996856_90997112_91001259_91001323_91074490
tx.19575	chr8	+	4911	22	FSM	ENSMUSG00000031666.16	ENSMUST00000034091.8	4925	22	14	0	1	0	multi-exon	FALSE	canonical	3	13	junction_12	4.6442610819949	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGTTTAGTTATATTG	NA	False	NA	NA	False	NA	NA	NA	91796698	91850472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
tx.19576	chr8	-	2124	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	16	-61	12	-9	multi-exon	TRUE	canonical	3	258	junction_9	63.7020456287233	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCAACCTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	91860639	91850135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
tx.19577	chr8	-	2063	10	NNC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	118.014228060397	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTTAAATAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	91860634	91850194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_91851310_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
tx.19578	chr8	-	2133	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	-1	68	-1	2	multi-exon	FALSE	canonical	3	60	junction_9	146.200581394193	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTTAAATAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	91860626	91850194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
tx.19579	chr8	-	6634	26	FSM	ENSMUSG00000033282.15	ENSMUST00000047783.14	7009	26	4	371	4	-371	multi-exon	FALSE	canonical	2	7	junction_9	4.90126514279732	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGTTCCTGCCATTC	NA	False	NA	NA	False	NA	NA	NA	92039886	91944028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979109_91979206_91979482_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346_92031646_92034669_92034815_92036965_92037058_92039830
tx.1958	chr10	-	1548	9	FSM	ENSMUSG00000060002.15	ENSMUST00000139109.8	1447	9	-75	-26	6	4	multi-exon	FALSE	canonical	0	0	junction_1	64.1847918123912	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATATTTCTGCAATATAA	4130	False	NA	NA	False	NA	NA	NA	88339826	88308674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_88308847_88311194_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
tx.19580	chr8	+	3547	9	FSM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	12	5	2	-5	multi-exon	FALSE	canonical	3	202	junction_7	44.2492937796752	331	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGAGCGTCCGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	92040164	92395062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
tx.19581	chr8	-	1127	6	NIC	ENSMUSG00000031736.12	novel	1238	7	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_4	5.31413210223457	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGTTTGTGTAATGG	NA	False	NA	NA	False	NA	NA	NA	93082512	93052660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_93053091_93071480_93071668_93072977_93073092_93073411_93073547_93077318_93077383_93082315
tx.19582	chr8	-	2835	6	NIC	ENSMUSG00000031736.12	novel	732	6	NA	NA	7	1977	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	4.87442304278158	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTATTTGATAAAGTC	NA	False	NA	NA	False	NA	NA	NA	93082512	93060861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_93063000_93071480_93071668_93072977_93073092_93073411_93073547_93077318_93077383_93082315
tx.19583	chr8	+	3060	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	18	0	18	0	multi-exon	FALSE	canonical	3	12	junction_9	5.63964143856288	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTGTTTTAGC	NA	False	NA	NA	False	NA	NA	NA	93553936	93580048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
tx.19584	chr8	-	3475	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	191	214	191	-214	multi-exon	TRUE	canonical	3	217	junction_1	15.7862947074897	386	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGTGGGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	94739279	94698429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
tx.19585	chr8	-	1090	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	12	3908	12	1	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	1041	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGGATCCTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	94763647	94746031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
tx.19586	chr8	+	5257	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	51	2	-11	-2	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTATGGTGGTAATTTA	NA	False	NA	NA	False	NA	NA	NA	94763876	94794547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
tx.19587	chr8	+	5119	12	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	45.1189428983488	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTATGGTGGTAATTTA	NA	False	NA	NA	False	NA	NA	NA	94763868	94794547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_94764071_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
tx.19588	chr8	-	2648	17	FSM	ENSMUSG00000031755.7	ENSMUST00000034206.6	3064	17	414	2	414	-2	multi-exon	FALSE	canonical	1	2	junction_15	7.54569413639329	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTTGTTGTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	94825142	94794583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395_94807568_94807652_94807798_94808625_94808766_94808983_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94819022_94819251_94824863
tx.19589	chr8	+	444	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	63	4	63	0	multi-exon	FALSE	canonical	3	13494	junction_2	132	1845	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTTGTCTCTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	94899354	94900192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_94899504_94899754_94899821_94899963
tx.1959	chr10	-	3230	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	5	663	5	-641	multi-exon	FALSE	canonical	3	100	junction_3	42.2794396889098	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTCTGTAAGGTTCTTT	4129	False	NA	NA	False	NA	NA	NA	88339827	88309341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
tx.19590	chr8	+	485	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	64	0	64	0	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	2508	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	94905773	94906955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_94905967_94906450_94906517_94906729
tx.19591	chr8	+	2695	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	12	0	-1	0	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	2168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	94941203	95041488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
tx.19592	chr8	+	2749	23	FSM	ENSMUSG00000032939.15	ENSMUST00000212824.2	2928	23	-27	206	-3	0	multi-exon	FALSE	canonical	3	35	junction_1	328.081966678305	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	94941201	95041488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
tx.19593	chr8	+	1883	8	FSM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	57	12	0	1	multi-exon	FALSE	canonical	3	396	junction_6	55.7864002152818	499	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCATTGTCCTGGCAAG	NA	False	NA	NA	False	NA	NA	NA	95113122	95121993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
tx.19594	chr8	+	2314	16	FSM	ENSMUSG00000034361.11	ENSMUST00000048653.10	2342	16	26	2	-23	-2	multi-exon	FALSE	canonical	2	2	junction_4	2.64491125665032	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAAGCTCCTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	95259643	95297157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95259822_95274955_95275174_95277797_95277978_95278367_95278443_95280017_95280090_95281302_95281387_95281557_95281648_95282136_95282236_95282599_95282687_95284047_95284108_95284752_95284887_95286736_95286792_95289365_95289418_95290584_95290719_95295218_95295456_95296598
tx.19595	chr8	-	1775	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	0	717	intron_retention	FALSE	non_canonical	0	0	junction_3	171.915855070118	341	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3886	False	NA	NA	False	NA	NA	NA	95328329	95301567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
tx.19596	chr8	-	1712	9	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-9	717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	197.424036023986	66	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3852	False	NA	NA	False	NA	NA	NA	95328363	95301567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124_95328213_95328309
tx.19597	chr8	+	3843	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	9	0	9	0	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	286	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTCACAGCTCTCATT	8120	False	NA	NA	False	NA	NA	NA	95328573	95386903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
tx.19598	chr8	+	3504	15	FSM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	-107	0	-6	0	multi-exon	FALSE	canonical	3	30	junction_1	38.5556184529014	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTCACAGCTCTCATT	8133	False	NA	NA	False	NA	NA	NA	95328586	95386903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95328733_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
tx.19599	chr8	+	1909	5	NIC	ENSMUSG00000031776.18	novel	2063	6	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	103.791859025648	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	False	NA	NA	False	NA	NA	NA	95393295	95401053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_95393530_95394224_95394287_95396948_95397056_95398689_95398787_95399644
tx.196	chr1	-	1326	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	654	-281	4	281	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACATAAGGAACTCCATT	NA	False	NA	NA	False	NA	NA	NA	38036320	38026193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
tx.1960	chr10	-	908	4	FSM	ENSMUSG00000060002.15	ENSMUST00000073783.6	852	4	-56	0	-11	0	multi-exon	FALSE	canonical	3	81	junction_1	64.2201076160903	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTCTTCCATATCTT	4113	False	NA	NA	False	NA	NA	NA	88339843	88322903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_88323125_88324243_88324386_88325442_88325591_88339446
tx.19600	chr8	+	2024	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	39	0	39	0	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	False	NA	NA	False	NA	NA	NA	95393266	95401053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
tx.19601	chr8	+	3119	3	FSM	ENSMUSG00000031778.14	ENSMUST00000034230.7	3315	3	196	0	1	0	multi-exon	FALSE	canonical	2	8	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGAACTTTTCTCTGGG	2375	False	NA	NA	False	NA	NA	NA	95498832	95509055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95498963_95504655_95504777_95506187
tx.19602	chr8	+	2950	2	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTGCGCATGTGCCA	NA	False	NA	NA	False	NA	NA	NA	95522133	95526440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_+_95524244_95525600
tx.19603	chr8	-	1504	8	ISM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	5563	-7	-7	7	3prime_fragment	FALSE	canonical	3	1537	junction_1	133.441265838463	359	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGAGTGTGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	95559330	95549181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142
tx.19604	chr8	-	1556	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	53	2750	-40	7	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	1153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGAGTGTGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	95564933	95549181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
tx.19605	chr8	+	1707	9	FSM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	82	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	12.7322179921646	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	95565030	95581523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
tx.19606	chr8	+	1191	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	59	330	8	171	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	1066	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGCGTCATCGTGCCAC	NA	False	NA	NA	False	NA	NA	NA	95584136	95590540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
tx.19607	chr8	-	2239	9	FSM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	65	0	65	0	multi-exon	FALSE	canonical	2	7	junction_8	3.67423461417477	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGTTCTGAAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	95644661	95629496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95644609
tx.19608	chr8	+	3452	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	148	16	146	2	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCCCGTCTCAGTT	827	False	NA	NA	False	NA	NA	NA	95703882	95740829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
tx.19609	chr8	+	2563	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	62	1152	62	-1152	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	192	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTTATGAGAGGAATAT	871	False	NA	NA	False	NA	NA	NA	95807875	95825687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
tx.1961	chr10	-	1778	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-16	-1116	-16	-2	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520893	88510635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
tx.19610	chr8	-	3608	22	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_2	22.097495779565	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCTGAATCGTCAGT	NA	False	NA	NA	False	NA	NA	NA	95869185	95826455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
tx.19611	chr8	-	3584	21	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	3	48	junction_17	16.2668374307977	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	NA	False	NA	NA	False	NA	NA	NA	95869190	95826457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
tx.19612	chr8	-	3255	19	NIC	ENSMUSG00000031788.15	novel	3277	20	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	17.8975134489214	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGCAATCTGAATCGT	NA	False	NA	NA	False	NA	NA	NA	95869184	95826459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
tx.19613	chr8	-	3287	20	FSM	ENSMUSG00000031788.15	ENSMUST00000034240.15	3277	20	-14	4	-14	2	multi-exon	FALSE	canonical	3	25	junction_2	24.0325264354334	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGCAATCTGAATCGT	NA	False	NA	NA	False	NA	NA	NA	95869189	95826459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
tx.19614	chr8	-	4394	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	-283	3121	-283	-3121	multi-exon	FALSE	canonical	3	26	junction_1	0	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCTTCCACTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	96058861	96052759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_96056441_96058148
tx.19615	chr8	+	1739	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	21	-2	2	2	multi-exon	FALSE	canonical	3	182	junction_6	19.6185852927495	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGTCTTATTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	96058932	96074137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
tx.19616	chr8	+	2087	7	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	-348	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	78.3212756677406	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	96058563	96074135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_96059075_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
tx.19617	chr8	+	4347	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	1	787	1	-787	multi-exon	FALSE	canonical	3	26	junction_5	7.43531778858738	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTCTACAGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	96078896	96100921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
tx.19618	chr8	-	2064	5	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	468	junction_1	23.0054341406547	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	96161455	96146876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_96147298_96147763_96148875_96149410_96149523_96151244_96151325_96161115
tx.19619	chr8	-	1269	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	26	0	1	0	multi-exon	FALSE	canonical	3	468	junction_1	23.7200337267888	309	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	96161471	96146876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
tx.1962	chr10	-	1679	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-3	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	88520891	88510636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
tx.19620	chr8	-	1204	5	FSM	ENSMUSG00000031796.8	ENSMUST00000212684.2	1023	5	-28	-153	11	0	multi-exon	FALSE	canonical	3	46	junction_4	193.603977231874	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	96161486	96146876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96161115
tx.19621	chr8	-	2543	11	ISM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	21	1876	21	2	intron_retention	FALSE	canonical	3	171	junction_1	42.5169378013046	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGGAGCGTATTTAGT	NA	False	NA	NA	False	NA	NA	NA	96215434	96174599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192
tx.19622	chr8	-	1907	12	FSM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	-10	1876	-10	2	multi-exon	FALSE	canonical	3	171	junction_1	43.8225195891393	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGGAGCGTATTTAGT	NA	False	NA	NA	False	NA	NA	NA	96215465	96174599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
tx.19623	chr8	-	6055	10	ISM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-28	1419	19	1344	intron_retention	FALSE	canonical	3	275	junction_8	20.1720990540626	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCTTCCCAACTAGGA	NA	False	NA	NA	False	NA	NA	NA	96215436	96176020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192
tx.19624	chr8	-	5041	9	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-26	1105	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	101.486452297831	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCTTCTTGATG	NA	False	NA	NA	False	NA	NA	NA	96215481	96176259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96214192_96214305_96214971
tx.19625	chr8	-	5206	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-86	1659	-39	1104	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGGCTCTTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	96215494	96176260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
tx.19626	chr8	-	5098	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	10	1104	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	87.7781293945138	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGGCTCTTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	96215445	96176260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96215030
tx.19627	chr8	+	2462	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	57	0	-44	0	multi-exon	FALSE	canonical	3	97	junction_2	2	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTTGTCACTAACTG	NA	False	NA	NA	False	NA	NA	NA	96360137	96371688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_96360412_96364437_96364672_96369734
tx.19628	chr8	-	3565	2	Genic_Genomic	ENSMUSG00000110701.2	novel	699	1	NA	NA	-3143	2373	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACAGAATTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	96405165	96398950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr8_-_96402127_96404776
tx.19629	chr8	+	2880	16	NIC	ENSMUSG00000036564.18	novel	713	11	NA	NA	-331	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	8.44169545898347	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGTCGTGTTTCCTAT	NA	False	NA	NA	False	NA	NA	NA	96404381	96441583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_96404500_96423821_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
tx.1963	chr10	+	1927	2	NNC	ENSMUSG00000111919.2	novel	326	2	NA	NA	-199	3020	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCCTATATAAACCTG	NA	False	NA	NA	False	NA	NA	NA	88540257	88543957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_88540492_88542264
tx.19630	chr8	+	2782	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	-45	1	-19	-1	multi-exon	FALSE	canonical	3	13	junction_5	6.1711295754251	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGTCGTGTTTCCTAT	NA	False	NA	NA	False	NA	NA	NA	96429645	96441583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
tx.19631	chr8	+	2967	2	NIC	ENSMUSG00000031671.12	novel	774	4	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	428	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	96442528	96445635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_96444964_96445103
tx.19632	chr8	+	1672	7	FSM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	31	4	-3	-4	multi-exon	FALSE	canonical	3	236	junction_4	62.8342175004105	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	96442539	96445634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
tx.19633	chr8	-	7678	49	FSM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	17	695	-12	10	multi-exon	FALSE	canonical	3	674	junction_30	244.612610932232	739	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	96534073	96446773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
tx.19634	chr8	-	7663	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	10	combination_of_known_junctions	FALSE	canonical	3	469	junction_30	257.98436106779	515	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	96534073	96446773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
tx.19635	chr8	-	3267	11	ISM	ENSMUSG00000036534.7	ENSMUST00000040481.4	3333	12	630	0	613	0	3prime_fragment	FALSE	canonical	3	251	junction_7	40.918944267906	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	NA	False	NA	NA	NA	96579537	96562547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429
tx.19636	chr8	-	3292	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	27	-4	10	0	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	446	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	NA	False	NA	NA	NA	96580140	96562547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
tx.19637	chr8	-	3746	11	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	212	junction_10	48.716013794234	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	NA	False	NA	NA	NA	96580140	96562547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
tx.19638	chr8	-	2390	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	139	1	-16	-1	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	861	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTCTGCTTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	96615036	96590762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
tx.19639	chr8	-	2386	10	FSM	ENSMUSG00000035824.8	ENSMUST00000050211.7	2406	10	7	13	0	0	multi-exon	FALSE	canonical	3	48	junction_4	11.1055541659718	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTAAATTCATTTTCA	NA	False	NA	NA	False	NA	NA	NA	104975183	104953329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
tx.1964	chr10	+	1759	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	319	2	319	-2	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	1097	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGATGTCTTTAGTGTC	NA	False	NA	NA	False	NA	NA	NA	88567248	88579954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
tx.19640	chr8	+	628	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	39	0	-3	0	multi-exon	FALSE	canonical	3	233	junction_3	21.1397466609439	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCAGATCTCCTT	4831	False	NA	NA	False	NA	NA	NA	104977531	104990079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
tx.19641	chr8	+	1587	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	28	1	28	-1	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGGAGTGCGCCTGAC	NA	False	NA	NA	False	NA	NA	NA	105067253	105074303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
tx.19642	chr8	-	7783	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	-62	13	-62	-13	multi-exon	FALSE	canonical	3	33	junction_2	2.49443825784929	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAACAAAAGCGCTTT	NA	False	NA	NA	False	NA	NA	NA	105122501	105074835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
tx.19643	chr8	-	4576	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	49	2	17	-2	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	249	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTTTTGGTGACTTTG	1817	False	NA	NA	False	NA	NA	NA	105169630	105144313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
tx.19644	chr8	-	1789	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	19	0	-4	0	multi-exon	FALSE	canonical	3	645	junction_15	52.7352662859429	523	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3352	False	NA	NA	False	NA	NA	NA	105261250	105237659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
tx.19645	chr8	-	1717	19	FSM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	18	0	-4	0	multi-exon	FALSE	canonical	3	78	junction_15	163.229558869982	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3352	False	NA	NA	False	NA	NA	NA	105261250	105237659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
tx.19646	chr8	+	5671	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	18	3	18	-3	multi-exon	FALSE	canonical	3	69	junction_1	0	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGCTTCCTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	105318100	105325655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_105318228_105320111
tx.19647	chr8	-	816	4	FSM	ENSMUSG00000031879.15	ENSMUST00000163140.2	807	4	-8	-1	-6	1	multi-exon	FALSE	canonical	3	675	junction_1	52.8288641642889	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTAGCGTCTCTCAT	NA	False	NA	NA	False	NA	NA	NA	105368339	105366471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942
tx.19648	chr8	+	2816	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	63	4	-7	4	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTCATGACTCTTTATT	3809	False	NA	NA	False	NA	NA	NA	105897368	105944617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
tx.19649	chr8	+	2847	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	48	-4	-7	4	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTCATGACTCTTTATT	3809	False	NA	NA	False	NA	NA	NA	105897368	105944617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
tx.1965	chr10	-	3284	2	FSM	ENSMUSG00000004356.9	ENSMUST00000218990.2	914	2	-2275	-95	-2275	0	multi-exon	FALSE	canonical	3	257	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	NA	False	NA	NA	NA	88585968	88582468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_88582922_88583137
tx.19650	chr8	+	2873	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	41	2	-20	-2	multi-exon	TRUE	canonical	3	239	junction_9	14.7126551724093	442	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGAGCTGTTGATTTCC	NA	False	NA	NA	False	NA	NA	NA	105951817	105979683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
tx.19651	chr8	-	2303	2	FSM	ENSMUSG00000069920.11	ENSMUST00000093217.9	2325	2	23	-1	23	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTCTCTTCTCAATTC	9986	False	NA	NA	False	NA	NA	NA	105981760	105979269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_105981475_105981662
tx.19652	chr8	-	1808	3	FSM	ENSMUSG00000031887.14	ENSMUST00000136239.2	710	3	327	-1425	327	521	multi-exon	FALSE	canonical	3	66	junction_1	5.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTTTTCTGATTGATT	5321	False	NA	NA	False	NA	NA	NA	105986425	105984396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_105985928_105986068_105986262_105986341
tx.19653	chr8	-	1675	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	13	1	7	-1	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTGCACGCCTTTAA	518	False	NA	NA	False	NA	NA	NA	105991228	105984918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
tx.19654	chr8	+	2761	2	ISM	ENSMUSG00000033313.12	ENSMUST00000036221.12	1901	3	-21	5	-21	-5	intron_retention	FALSE	canonical	1	1	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCCTGTGATCTCGAGT	1509	False	NA	NA	False	NA	NA	NA	105991258	105995953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_105991393_105993326
tx.19655	chr8	+	2026	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	278	872	278	-872	multi-exon	FALSE	canonical	2	9	junction_3	2.05480466765633	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	106003049	106007699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
tx.19656	chr8	-	3131	7	FSM	ENSMUSG00000014837.16	ENSMUST00000014981.8	3492	7	361	0	1	0	multi-exon	FALSE	canonical	3	11	junction_6	11.0302614051829	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	False	NA	NA	False	NA	NA	NA	106016135	106007040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106016035
tx.19657	chr8	-	3240	8	NNC	ENSMUSG00000014837.16	novel	3552	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	14.059639731791	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	False	NA	NA	False	NA	NA	NA	106016141	106007040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015694_106015798_106016035
tx.19659	chr8	-	3528	8	FSM	ENSMUSG00000014837.16	ENSMUST00000171788.8	3552	8	25	-1	1	0	multi-exon	FALSE	canonical	3	15	junction_6	10.3628063333269	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	False	NA	NA	False	NA	NA	NA	106016135	106007040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400_106015798_106016035
tx.1966	chr10	-	8840	62	FSM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	-19	0	-19	0	multi-exon	TRUE	canonical	3	123	junction_48	34.745281900583	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	NA	False	NA	NA	NA	88662685	88582468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
tx.19660	chr8	-	2624	14	FSM	ENSMUSG00000043251.7	ENSMUST00000057855.4	2497	14	-126	-1	-123	1	multi-exon	FALSE	canonical	3	7	junction_13	7.19467258528611	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAATCTATGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	106022856	106016554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106021891_106022068_106022257_106022339_106022537
tx.19661	chr8	-	4057	14	NNC	ENSMUSG00000043251.7	novel	2497	14	NA	NA	-1516	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	8.32619023245219	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAATCTATGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	106024249	106016554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106021891_106022068_106022257_106022379_106022537
tx.19662	chr8	+	1966	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	27	0	-27	0	multi-exon	TRUE	canonical	0	0	junction_3	369.398142461925	1518	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	106024321	106032002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
tx.19663	chr8	+	2419	20	FSM	ENSMUSG00000014791.11	ENSMUST00000109375.4	3189	20	-13	783	-5	0	multi-exon	FALSE	canonical	2	9	junction_11	6.90778195396653	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTTAAATCAGCTC	NA	False	NA	NA	False	NA	NA	NA	106032227	106036609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
tx.19664	chr8	-	2327	7	FSM	ENSMUSG00000041679.10	ENSMUST00000210412.2	2304	7	-15	-8	0	1	multi-exon	TRUE	canonical	0	0	junction_1	2.73353657780945	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTCTCTGATGTTCTC	6331	False	NA	NA	False	NA	NA	NA	106052906	106038971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106039578_106039676_106039895_106040052_106040197_106040312_106040529_106041707_106042701_106049896_106049999_106052858
tx.19665	chr8	+	819	6	FSM	ENSMUSG00000014856.13	ENSMUST00000153146.9	801	6	-18	0	-10	0	multi-exon	FALSE	canonical	3	25	junction_4	152.856010676715	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	241	False	NA	NA	False	NA	NA	NA	106052975	106055687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055117_106055239_106055325_106055403
tx.19666	chr8	+	776	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	7	2	-1	0	multi-exon	FALSE	canonical	3	269	junction_4	56.0556865982391	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	258	False	NA	NA	False	NA	NA	NA	106052992	106055687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
tx.19667	chr8	+	923	5	FSM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	-23	-5	3	0	multi-exon	FALSE	canonical	3	392	junction_2	13.1909059582729	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	262	False	NA	NA	False	NA	NA	NA	106052996	106055689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055325_106055403
tx.19668	chr8	+	4236	16	NNC	ENSMUSG00000014786.9	novel	3499	16	NA	NA	-22	-534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	2.72437556556034	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTCCTCTGTCCATTT	NA	False	NA	NA	False	NA	NA	NA	106075452	106095979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_106076205_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083491_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
tx.19669	chr8	+	4496	16	FSM	ENSMUSG00000014786.9	ENSMUST00000073149.7	3499	16	-393	-604	-393	-534	multi-exon	FALSE	canonical	0	0	junction_14	2.98589275687449	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTCCTCTGTCCATTT	NA	False	NA	NA	False	NA	NA	NA	106075081	106095979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106076205_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083602_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
tx.1967	chr10	-	6293	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	14	-2	1	2	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGCTTTTTTAATGT	NA	False	NA	NA	False	NA	NA	NA	89279815	89245122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
tx.19670	chr8	+	2930	12	NIC	ENSMUSG00000014782.17	novel	4167	21	NA	NA	2253	1	intron_retention	FALSE	canonical	2	5	junction_4	3.35994883865024	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGCATATGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	106104265	106109492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_106104516_106104931_106105115_106105312_106105819_106105886_106106134_106106754_106106845_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572_106108689_106108867
tx.19671	chr8	-	2264	14	FSM	ENSMUSG00000039199.7	ENSMUST00000212303.2	2056	14	-208	0	-176	0	multi-exon	FALSE	canonical	0	0	junction_10	3.75428748981921	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGCGGACTTAATGC	NA	False	NA	NA	False	NA	NA	NA	106223710	106199054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820_106211060_106212093_106212141_106214422_106214499_106223441
tx.19672	chr8	-	1644	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	-14	-1	-14	1	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	537	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTCTGTCTGCTCCC	NA	False	NA	NA	False	NA	NA	NA	106292693	106251095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
tx.19673	chr8	+	4112	22	FSM	ENSMUSG00000038604.10	ENSMUST00000043531.10	4108	22	-7	3	-7	-3	multi-exon	FALSE	canonical	3	65	junction_11	11.8587682955494	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTTTCCTACATGG	2635	False	NA	NA	False	NA	NA	NA	106331879	106348848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
tx.19674	chr8	+	3838	12	FSM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	-57	1	-46	-1	multi-exon	FALSE	canonical	3	206	junction_10	73.0190736997323	364	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	NA	False	NA	NA	NA	106363153	106409553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
tx.19675	chr8	+	3835	12	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	3	229	junction_10	67.2234463229697	360	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	NA	False	NA	NA	NA	106363153	106409553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
tx.19676	chr8	+	4582	39	FSM	ENSMUSG00000050357.10	ENSMUST00000213019.2	4194	39	-336	-52	-336	8	multi-exon	FALSE	canonical	3	28	junction_20	8.5824984578148	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	106412569	106424827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
tx.19677	chr8	+	4503	38	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-341	5	combination_of_known_junctions	TRUE	canonical	3	15	junction_36	9.80481538199191	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	NA	NA	NA	106412564	106424824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
tx.19678	chr8	-	1420	11	FSM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	-4	1738	-3	0	multi-exon	TRUE	canonical	3	179	junction_7	13.7637204272682	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	NA	False	NA	NA	NA	106427720	106424788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
tx.19679	chr8	-	1865	8	NIC	ENSMUSG00000038000.11	novel	2722	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	202	junction_4	10.1840210974981	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGGAGAGAGATTCAGG	NA	False	NA	NA	False	NA	NA	NA	106427717	106424790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426528_106426635_106426991_106427078_106427173_106427334_106427472_106427551
tx.1968	chr10	-	3987	18	FSM	ENSMUSG00000069539.12	ENSMUST00000174252.8	4817	18	-12	842	-12	106	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTTCAAGTATAGTAA	NA	False	NA	NA	False	NA	NA	NA	89522159	89475424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_89476979_89477852_89477973_89481323_89481420_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
tx.19680	chr8	+	1237	3	NIC	ENSMUSG00000005699.17	novel	1234	3	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	106427788	106430126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_106427919_106428805_106429029_106429242
tx.19681	chr8	+	1252	3	FSM	ENSMUSG00000005699.17	ENSMUST00000093195.7	1265	3	14	-1	12	0	multi-exon	FALSE	canonical	3	15	junction_1	5.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	106428292	106430125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106428436_106428805_106429029_106429239
tx.19682	chr8	-	1378	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_7	49.3529562003563	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	106434785	106430280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434675
tx.19683	chr8	-	1500	7	FSM	ENSMUSG00000013155.11	ENSMUST00000013299.11	1275	7	-222	-3	-10	2	multi-exon	FALSE	canonical	3	158	junction_2	11.5854314646552	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	106434787	106430280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455
tx.19684	chr8	-	1322	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	59.2993099729272	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	106434766	106430280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434712
tx.19685	chr8	-	1300	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_7	45.9436211734623	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	106434820	106430280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434788
tx.19686	chr8	-	2368	3	FSM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	36	1948	2	1615	multi-exon	FALSE	canonical	3	21	junction_1	4	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGTTTGGGACAGG	NA	False	NA	NA	False	NA	NA	NA	106485260	106442433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106444283_106454619_106454964_106485085
tx.19687	chr8	-	5164	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	142	2	-3	-2	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGTCTGTTGTTCAGA	NA	False	NA	NA	False	NA	NA	NA	106553840	106494941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
tx.19688	chr8	-	1772	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	46	-4	0	0	multi-exon	FALSE	canonical	3	157	junction_3	25.0593739391514	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	NA	NA	NA	106578640	106571304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
tx.19689	chr8	+	1970	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	46	-1068	15	1068	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTATGGTCTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	106587257	106607030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
tx.1969	chr10	-	3982	18	FSM	ENSMUSG00000069539.12	ENSMUST00000092227.12	3566	18	-29	-387	-12	104	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTGTTTCAAGTATAGT	NA	False	NA	NA	False	NA	NA	NA	89522159	89475426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
tx.19690	chr8	+	3073	4	FSM	ENSMUSG00000008450.9	ENSMUST00000212398.2	518	4	-11	-2544	9	3	multi-exon	FALSE	canonical	3	2641	junction_1	479.48606746066	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTAAATTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	106587285	106605965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141
tx.19691	chr8	+	4747	29	FSM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	13	20	13	-3	multi-exon	TRUE	canonical	3	268	junction_16	54.5128121057194	500	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGTGTGATTTTA	3269	False	NA	NA	False	NA	NA	NA	106607525	106619837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
tx.19692	chr8	+	3287	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	-6	-26	-6	26	multi-exon	FALSE	canonical	3	44	junction_1	10	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGACTGTGCCATGGGA	NA	False	NA	NA	False	NA	NA	NA	106627066	106658436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106627173_106639251_106640279_106656282
tx.19693	chr8	+	2766	2	ISM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	12593	-25	12593	25	3prime_fragment	FALSE	canonical	3	64	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGACTGTGCCATGGG	3373	False	NA	NA	False	NA	NA	NA	106639665	106658435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_106640279_106656282
tx.19694	chr8	-	554	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212686.2	554	4	1	-1	1	0	multi-exon	FALSE	canonical	3	157	junction_3	46.7784375778224	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGAAGGCTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	106663669	106662366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497
tx.19695	chr8	-	582	3	FSM	ENSMUSG00000031897.10	ENSMUST00000212938.2	646	3	77	-13	75	4	multi-exon	FALSE	canonical	3	246	junction_1	9	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAAGGCTGTGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	106663582	106662362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106662538_106662627_106662780_106663327
tx.19696	chr8	-	3820	24	FSM	ENSMUSG00000017765.18	ENSMUST00000116429.9	3755	24	-66	1	-13	-1	multi-exon	FALSE	canonical	3	126	junction_15	19.3746272602721	340	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTGCTCCGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	106692742	106670222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
tx.19697	chr8	-	1709	10	FSM	ENSMUSG00000031898.10	ENSMUST00000034371.9	1698	10	-17	6	-17	-6	multi-exon	FALSE	canonical	3	28	junction_5	8.79955105476592	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAAGTGTCTGAGCCCTC	NA	False	NA	NA	False	NA	NA	NA	106706078	106700150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106700484_106701326_106701463_106701813_106701890_106702751_106702837_106703892_106704070_106704191_106704262_106704531_106704674_106704773_106704904_106705343_106705471_106705645
tx.19698	chr8	+	1885	16	FSM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	-20	-5	-20	5	multi-exon	FALSE	canonical	3	148	junction_9	22.4047613987146	129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGCTTCAACCTTACAT	NA	False	NA	NA	False	NA	NA	NA	106738118	106780456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
tx.19699	chr8	+	6032	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-50	2	-50	-2	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	407	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTTGAAATCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	106786214	106857167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
tx.197	chr1	-	2610	4	FSM	ENSMUSG00000058407.13	ENSMUST00000194747.2	2605	4	-2	-3	-2	1	multi-exon	FALSE	canonical	3	675	junction_1	99.432836069826	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATGTCTGTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	38036307	38026473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_38026861_38029283_38029539_38033072_38034923_38036189
tx.1970	chr10	-	1708	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	-2	-1	-2	1	multi-exon	FALSE	canonical	3	269	junction_5	22.702422778197	148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTTTAATGTTTAT	NA	False	NA	NA	False	NA	NA	NA	89568159	89547831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
tx.19700	chr8	+	6133	11	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	78.5147119971792	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGAAATCTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	106786218	106857168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
tx.19701	chr8	+	3543	2	ISM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	48572	2	9440	-2	3prime_fragment	FALSE	canonical	3	207	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTTGAAATCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	106834836	106857167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_106835762_106854549
tx.19702	chr8	-	3468	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	-13	81	-13	-81	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCAAGTGCTGTAAACA	NA	False	NA	NA	False	NA	NA	NA	106863619	106857031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
tx.19703	chr8	+	3055	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	12	683	-6	178	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGGAATGTTCTACA	1844	False	NA	NA	False	NA	NA	NA	106895500	106924655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
tx.19704	chr8	+	3192	10	NIC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	18	168	intron_retention	FALSE	canonical	3	12	junction_1	155.192671966491	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGCAAGAGGCCTGGA	1879	False	NA	NA	False	NA	NA	NA	106895535	106924645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_106895769_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
tx.19705	chr8	+	2566	7	ISM	ENSMUSG00000031904.6	ENSMUST00000212377.2	2672	11	23173	-169	13697	169	3prime_fragment	FALSE	canonical	3	50	junction_4	156.740408177201	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGCAAGAGGCCTGGAA	1049	False	NA	NA	False	NA	NA	NA	106918679	106924646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
tx.19706	chr8	-	1608	4	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	2	-277	2	277	intron_retention	FALSE	canonical	3	127	junction_1	3.29983164553722	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGCAGTTCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	106937563	106927071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996
tx.19707	chr8	-	1525	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-2	-277	0	277	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGCAGTTCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	106937567	106927071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
tx.19708	chr8	+	2285	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	87	1100	0	-1100	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	1596	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTGGCTCAATGGGG	1906	False	NA	NA	False	NA	NA	NA	106937654	106978326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
tx.19709	chr8	+	2599	4	FSM	ENSMUSG00000031907.10	ENSMUST00000213045.2	3447	4	-24	872	-24	-2	multi-exon	FALSE	canonical	2	7	junction_2	7.48331477354788	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACAGGCTTCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	107141934	107152358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107142403_107145702_107145830_107146052_107146243_107150544
tx.1971	chr10	+	6434	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	14	0	14	0	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	NA	False	NA	NA	NA	89580866	89655733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
tx.19710	chr8	+	2558	4	FSM	ENSMUSG00000031907.10	ENSMUST00000034382.8	2632	4	-6	80	6	-80	multi-exon	FALSE	canonical	2	13	junction_1	5.09901951359278	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCAGAGTCACCAAGT	NA	False	NA	NA	False	NA	NA	NA	107141964	107152441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107142403_107145702_107145830_107146146_107146243_107150544
tx.19711	chr8	+	3245	16	FSM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	-33	1172	-33	-1172	multi-exon	FALSE	canonical	3	35	junction_1	6.02218122167265	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGCTAGGGGAGTGGAT	NA	False	NA	NA	False	NA	NA	NA	107237489	107282757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107237639_107237855_107237974_107262039_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
tx.19712	chr8	+	3229	16	NNC	ENSMUSG00000061048.9	novel	4384	16	NA	NA	-24	-1176	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	12.1039938312388	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGGTGCTAGGGGAGT	NA	False	NA	NA	False	NA	NA	NA	107237498	107282753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_107237639_107237855_107237974_107262042_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
tx.19713	chr8	+	4437	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	-7	0	-7	0	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	2019	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5042	False	NA	NA	False	NA	NA	NA	107329975	107396878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
tx.19714	chr8	+	3833	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	2	574	2	-574	multi-exon	FALSE	canonical	3	69	junction_2	14.9330686662985	229	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCACCGAGCTGGTTG	1115	False	NA	NA	False	NA	NA	NA	107409701	107577497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
tx.19715	chr8	-	2908	4	FSM	ENSMUSG00000046691.15	ENSMUST00000177068.8	2931	4	-6	29	2	2	multi-exon	FALSE	canonical	3	308	junction_2	18.5472369909914	519	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTCGCTCCATTTTG	NA	False	NA	NA	False	NA	NA	NA	107620231	107610523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107620132
tx.19716	chr8	-	2782	3	FSM	ENSMUSG00000117748.2	ENSMUST00000176437.9	369	3	-1	-2412	1	-3	multi-exon	FALSE	canonical	3	66	junction_1	124	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	107620224	107610524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_107613159_107613932_107613989_107620132
tx.19717	chr8	+	2240	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	-6	-2	-6	2	multi-exon	TRUE	canonical	3	1046	junction_1	100.936996902771	1560	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGACATTTTAAATTATT	NA	False	NA	NA	False	NA	NA	NA	107620276	107649722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
tx.19718	chr8	+	4459	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	-11	5497	-11	1037	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	217	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTATGTGGAATCTGA	NA	False	NA	NA	False	NA	NA	NA	107662370	107740849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
tx.19719	chr8	+	2090	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	89	-1	89	1	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	219	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGAGTCGTCTCATT	NA	False	NA	NA	False	NA	NA	NA	107757942	107772388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
tx.1972	chr10	+	6568	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	NA	False	NA	NA	NA	89580866	89655733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
tx.19720	chr8	-	1549	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	-9	-234	-9	234	multi-exon	FALSE	canonical	3	275	junction_1	0	169	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTGGTAGCCACTTTGA	NA	False	NA	79	True	NA	NA	NA	107775255	107772917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_107773904_107774692
tx.19721	chr8	-	2054	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	3	2419	-2	-2413	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTCGCCTGCTGTTCCCG	NA	False	NA	NA	False	NA	NA	NA	107783318	107775339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
tx.19722	chr8	+	1132	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	16	1888	-8	377	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	231	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGAGTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	107783524	107785675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
tx.19723	chr8	+	3100	4	NIC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	714	junction_3	58.9594964549581	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAAGTTGTCTCCGTATC	NA	False	NA	NA	False	NA	NA	NA	107783531	107787557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_107783623_107783724_107784044_107784678_107784820_107785008
tx.19724	chr8	-	2649	10	FSM	ENSMUSG00000031921.18	ENSMUST00000068421.13	2667	10	20	-2	-11	0	multi-exon	FALSE	canonical	3	17	junction_3	7.27247474309048	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTCTAGCTGGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	107823157	107796031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
tx.19725	chr8	-	2330	7	FSM	ENSMUSG00000031921.18	ENSMUST00000116425.3	2471	7	1	140	-1	-140	multi-exon	FALSE	canonical	3	29	junction_6	4.88762609953839	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACACTGTTGTGTATCAT	NA	False	NA	NA	False	NA	NA	NA	107823178	107802288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
tx.19726	chr8	+	4304	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	4	8	4	-8	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	1320	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGACTACGGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	107877275	107914095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
tx.19727	chr8	+	4886	3	ISM	ENSMUSG00000003847.17	ENSMUST00000147588.2	5481	7	11470	-9	11470	9	3prime_fragment	FALSE	canonical	1	2	junction_1	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTTTGTAATTTTAATA	NA	False	NA	NA	False	NA	NA	NA	108093921	108100171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_108096184_108097049_108097292_108097789
tx.19728	chr8	-	1554	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	0	-1	0	1	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGGCGCATGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	108129838	108114855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
tx.19729	chr8	-	1740	8	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	16	-3	-7	0	intron_retention	FALSE	canonical	3	419	junction_2	37.0090998186629	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGTTTTATTTGGG	NA	False	NA	NA	False	NA	NA	NA	108151665	108139117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369
tx.1973	chr10	+	7915	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	20	1629	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	30.3158808478155	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTTGGGTAAATC	NA	False	NA	NA	False	NA	NA	NA	89580872	89657362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
tx.19730	chr8	-	1662	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	-1	-3	-1	0	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	387	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGTTTTATTTGGG	NA	False	NA	NA	False	NA	NA	NA	108151682	108139117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
tx.19731	chr8	+	3106	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	186.108316728607	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	108163002	108283845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108282292_108282473_108283092_108283190_108283343_108283417_108283518
tx.19732	chr8	+	2922	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	10	1382	-9	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	1255	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	108163006	108283845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
tx.19733	chr8	-	1566	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	16	-1	10	1	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	1962	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCTAGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	108315080	108307011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
tx.19734	chr8	-	2717	2	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTCGTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	108408878	108404227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_108406856_108408789
tx.19735	chr8	+	5437	2	ISM	ENSMUSG00000038872.11	ENSMUST00000043896.10	16433	10	234246	3693	234246	-3693	3prime_fragment	FALSE	canonical	2	7	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	109675521	109684569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_109678403_109682013
tx.19736	chr8	-	4344	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	116	0	at_least_one_novel_splicesite	TRUE	canonical	3	48	junction_24	18.695314731221	52	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	NA	False	NA	NA	NA	110292377	110274642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
tx.19737	chr8	-	4351	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	111	1	111	-1	multi-exon	FALSE	canonical	3	61	junction_24	17.2223966609053	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGCATTTTAAATCTC	NA	False	NA	NA	False	NA	NA	NA	110292382	110274643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
tx.19738	chr8	+	1839	4	FSM	ENSMUSG00000031723.9	ENSMUST00000034159.8	1890	4	42	9	42	-9	multi-exon	FALSE	canonical	3	27	junction_1	19.3045763140937	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTCAGCAGGGTTGT	NA	False	NA	NA	False	NA	NA	NA	110292565	110300674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_110292696_110295521_110295730_110298002_110298155_110299325
tx.19739	chr8	-	2521	7	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-26	0	intron_retention	FALSE	canonical	3	350	junction_6	48.3517206404166	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	False	NA	NA	False	NA	NA	NA	110335024	110320108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_110320764_110321251_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
tx.1974	chr10	+	6415	21	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_17	30.3006188055624	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATACTTTGTCCGATT	NA	False	NA	NA	False	NA	NA	NA	89580866	89655729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
tx.19740	chr8	-	1814	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	223	2	20	-2	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTAGAATATATTGTTA	NA	False	NA	NA	False	NA	NA	NA	110335032	110320110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
tx.19741	chr8	-	2324	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	-19	-1	-19	1	multi-exon	FALSE	canonical	3	462	junction_2	71.0226880807973	583	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTGGTCAAATGAGT	NA	False	NA	NA	False	NA	NA	NA	110419911	110397955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
tx.19742	chr8	+	1880	9	NNC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.34322329798262	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	110432147	110451564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_110432197_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
tx.19743	chr8	+	2027	8	FSM	ENSMUSG00000031728.11	ENSMUST00000212964.2	2033	8	7	-1	4	1	multi-exon	FALSE	canonical	2	17	junction_2	5.70356136505061	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCCCTTGTCTCATT	NA	False	NA	NA	False	NA	NA	NA	110432184	110451565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
tx.19744	chr8	+	2147	9	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	4.9180788932265	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	110432179	110451564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
tx.19745	chr8	+	2106	9	FSM	ENSMUSG00000031728.11	ENSMUST00000034163.9	2127	9	22	-1	22	1	multi-exon	FALSE	canonical	2	14	junction_5	6.08147802758507	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCCCTTGTCTCATT	NA	False	NA	NA	False	NA	NA	NA	110432202	110451565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
tx.19746	chr8	-	7501	3	FSM	ENSMUSG00000069895.5	ENSMUST00000212605.2	7439	3	-58	-4	-41	0	multi-exon	FALSE	canonical	3	17	junction_2	6.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTGCGCCTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	110464412	110453082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_110460375_110461936_110461996_110464262
tx.19747	chr8	-	7467	4	FSM	ENSMUSG00000069895.5	ENSMUST00000093162.4	7526	4	-1	60	-1	-56	multi-exon	FALSE	canonical	3	22	junction_3	4.32049379893857	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATCAATATCTATATA	NA	False	NA	NA	False	NA	NA	NA	110464372	110453142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_110460375_110461936_110461996_110462091_110462158_110464262
tx.19748	chr8	+	6672	22	NIC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	20	6	intron_retention	FALSE	canonical	1	4	junction_1	45.8165522773706	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGCCTTGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	110505205	110590842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_110505595_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
tx.19749	chr8	+	6845	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-305	-2848	47	2	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	359	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTTTGCTGCCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	110505232	110590838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
tx.1975	chr10	+	4116	8	ISM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	60055	1	-1669	-1	3prime_fragment	FALSE	canonical	3	122	junction_6	9.45235096552758	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTTTGTCCGATTGGT	NA	False	NA	NA	False	NA	NA	NA	89640907	89655732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
tx.19750	chr8	+	4896	5	FSM	ENSMUSG00000044676.11	ENSMUST00000212754.2	4863	5	-33	0	-17	0	multi-exon	FALSE	canonical	3	11	junction_2	6.21992765231236	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCTGAGACTTGCTTC	918	False	NA	NA	False	NA	NA	NA	110806360	110819373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_110806637_110809309_110809375_110810288_110810416_110810975_110811084_110815053
tx.19751	chr8	+	4933	5	FSM	ENSMUSG00000044676.11	ENSMUST00000058804.10	3180	5	-22	-1731	-4	0	multi-exon	FALSE	canonical	1	4	junction_2	8.66025403784439	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCTGAGACTTGCTTC	931	False	NA	NA	False	NA	NA	NA	110806373	110819373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_110806637_110809309_110809375_110810238_110810416_110810975_110811084_110815053
tx.19752	chr8	+	1582	9	NNC	ENSMUSG00000095941.4	novel	1649	10	NA	NA	121	53	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	7.68114574786861	5	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGATTGTGTGTTTCAG	NA	False	NA	NA	False	NA	NA	NA	110827959	110838646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_110828167_110835615_110835750_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837295_110837438_110837593_110837930_110838005_110838289
tx.19753	chr8	-	1159	9	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	15130	5	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_8	57.2319840648566	37	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTTTCTTGTCGTGGGC	NA	False	NA	NA	False	NA	NA	NA	110879708	110869164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110879655
tx.19754	chr8	-	1439	11	FSM	ENSMUSG00000003657.10	ENSMUST00000003754.8	1431	11	-6	-2	-2	2	multi-exon	FALSE	canonical	3	153	junction_9	44.1960405466372	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACCCGTTTCTTGTCGTG	7610	False	NA	NA	False	NA	NA	NA	110894844	110869167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110881375_110883551_110883629_110894675
tx.19755	chr8	+	3558	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	-12	-1	-12	1	multi-exon	TRUE	canonical	3	60	junction_1	0	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGTGTTTGTTTCAT	3628	False	NA	NA	False	NA	NA	NA	110944608	110951119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_110944719_110947671
tx.19756	chr8	-	1403	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_2	70.5	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGTATTCCTGAGTCTAT	9429	False	NA	NA	False	NA	NA	NA	111248709	111221341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_-_111222416_111227500_111227611_111248490
tx.19757	chr8	-	658	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	156	junction_2	25.5	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGGTATTTGGTCATAT	9329	False	NA	NA	False	NA	NA	NA	111248809	111221979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_-_111222416_111227500_111227611_111248697
tx.19758	chr8	+	5470	19	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	247114	50633	69602	-50633	internal_fragment	FALSE	canonical	3	19	junction_12	4.32370725702428	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAAACTGCCTAGAATTT	NA	False	NA	NA	False	NA	NA	NA	111240722	111286252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
tx.19759	chr8	+	3840	12	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	266101	50636	88589	-50636	internal_fragment	FALSE	canonical	3	19	junction_5	4.76904619949236	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGATTAAACTGCCTAGAA	407	False	NA	NA	False	NA	NA	NA	111259709	111286249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
tx.1976	chr10	-	6607	27	FSM	ENSMUSG00000019979.13	ENSMUST00000020157.13	6577	27	-23	-7	-23	0	multi-exon	TRUE	canonical	3	23	junction_26	18.4606169641815	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCGGGATCCTTT	NA	False	NA	NA	False	NA	NA	NA	90918655	90825172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
tx.19760	chr8	+	3877	17	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	-17	14	1	-14	intron_retention	FALSE	canonical	3	368	junction_15	41.455548482682	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGCCATTGGCAATCAG	7348	False	NA	NA	False	NA	NA	NA	111345217	111440997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379
tx.19761	chr8	+	3080	19	FSM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	-11	0	3	0	multi-exon	FALSE	canonical	3	368	junction_15	41.1869046070606	733	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	7350	False	NA	NA	False	NA	NA	NA	111345219	111447030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
tx.19762	chr8	+	4848	14	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-37	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	23.3298954920214	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCCCCGGCTTCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	111448070	111468030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458593_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
tx.19763	chr8	+	2472	10	ISM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	-22	7960	-22	1430	5prime_fragment	FALSE	canonical	3	89	junction_6	9.56975688894866	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTAACTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	111448085	111460072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689
tx.19764	chr8	+	4751	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	-36	2	-36	-2	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCCCCGGCTTCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	111448071	111468030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
tx.19765	chr8	+	3913	8	ISM	ENSMUSG00000033763.15	ENSMUST00000144041.8	3225	14	3112	-1474	1481	9	3prime_fragment	FALSE	canonical	3	80	junction_5	8.30539534499922	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCCTGGCTCCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	111455469	111468041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
tx.19766	chr8	-	2556	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-13322	757	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_6	7.54247233265651	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCCCCCAAACCAGTC	NA	False	NA	NA	False	NA	NA	NA	111482652	111467703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111482403
tx.19767	chr8	-	4282	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-10	253	1	-253	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	1063	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	111573418	111537123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
tx.19768	chr8	+	2736	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	-1	2	-1	-2	multi-exon	TRUE	canonical	3	332	junction_8	32.668367302671	626	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATTGTGTTGGGTCC	9627	False	NA	NA	False	NA	NA	NA	111573664	111608857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
tx.19769	chr8	-	3826	24	FSM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	8	4	-3	-4	multi-exon	TRUE	canonical	3	94	junction_23	12.3354193641104	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTTCAGAAAACTGTT	1251	False	NA	NA	False	NA	NA	NA	111629083	111609098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
tx.1977	chr10	-	6522	27	FSM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	-90	1	18	-1	multi-exon	FALSE	canonical	3	61	junction_15	13.5705476423617	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTTTCGGGATCCTT	NA	False	NA	NA	False	NA	NA	NA	90918614	90825173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
tx.19770	chr8	+	3826	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-39	609	-39	-609	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	2998	False	NA	NA	False	NA	NA	NA	111646514	111698503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
tx.19771	chr8	+	3405	6	ISM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	37032	611	16050	-611	3prime_fragment	FALSE	canonical	3	80	junction_1	7.93473376995095	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGAGTCACTCATCTGTT	NA	False	NA	NA	False	NA	NA	NA	111683585	111698501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
tx.19772	chr8	-	3003	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-10	-446	-10	446	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	291	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATTATGTATAGT	7676	False	NA	NA	False	NA	NA	NA	111724442	111701181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
tx.19773	chr8	-	810	7	FSM	ENSMUSG00000015023.8	ENSMUST00000173183.2	731	7	-25	-54	5	54	multi-exon	FALSE	canonical	3	259	junction_3	37.1786228900426	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGTGTCATGGGCT	7691	False	NA	NA	False	NA	NA	NA	111724427	111707050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
tx.19774	chr8	-	6577	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	0	-3473	0	2	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTATTTTGTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	111758383	111729817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
tx.19775	chr8	-	6618	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	-5	-1	-5	1	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGGTATTTTGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	111754401	111729818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
tx.19776	chr8	+	3333	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-10	-2095	combination_of_known_junctions	FALSE	canonical	2	881	junction_1	574.494062197339	1817	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	NA	False	NA	NA	NA	111760500	111782201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
tx.19777	chr8	+	3642	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	13	2095	-1	-2095	multi-exon	FALSE	canonical	2	1913	junction_1	386.82599124154	4177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	NA	False	NA	NA	NA	111760546	111782201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
tx.19778	chr8	+	7612	18	FSM	ENSMUSG00000033624.11	ENSMUST00000039333.10	4938	18	31	-2705	17	2705	multi-exon	TRUE	canonical	3	24	junction_1	8.20878085010087	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTTGTGAAATGTCC	NA	False	NA	NA	False	NA	NA	NA	111821303	111866411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_111821459_111828445_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
tx.19779	chr8	+	7558	18	NIC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	22	2703	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	9.5822789149634	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCACTTGTGAAATGT	NA	False	NA	NA	False	NA	NA	NA	111821308	111866409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_111821459_111828492_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
tx.1978	chr10	-	3836	13	ISM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	42751	2	-39500	0	3prime_fragment	FALSE	canonical	3	77	junction_8	10.7225100709779	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGTTTCGGGATCCT	NA	False	NA	NA	False	NA	NA	NA	90875773	90825174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646
tx.19780	chr8	-	8126	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	5	-1110	5	1110	multi-exon	TRUE	canonical	3	407	junction_22	36.1425178978997	639	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCGAATATTCTCTG	6433	False	NA	NA	False	NA	NA	NA	111985843	111879942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
tx.19781	chr8	-	6275	15	ISM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	81453	-1108	13	1108	3prime_fragment	FALSE	canonical	3	424	junction_11	36.632761070843	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTCGAATATTCTC	5785	False	NA	NA	False	NA	NA	NA	111904395	111879944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276
tx.19782	chr8	-	4450	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	-7	0	-7	0	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	643	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5489	False	NA	NA	False	NA	NA	NA	112026861	111997575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
tx.19783	chr8	-	5064	27	NNC	ENSMUSG00000031959.16	novel	4896	27	NA	NA	-8	10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	13.3961047062859	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAACACAGTCTGATGTC	NA	False	NA	NA	False	NA	NA	NA	112248732	112175418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_112176734_112176770_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
tx.19784	chr8	-	5101	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	-13	-5	-13	5	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGTACTAACACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	112248737	112175423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
tx.19785	chr8	+	1636	5	FSM	ENSMUSG00000033545.15	ENSMUST00000168428.8	4451	5	-131	2946	-131	111	multi-exon	FALSE	canonical	3	40	junction_4	33.169074451965	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTTTTCCCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	112263140	112349716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349430
tx.19786	chr8	+	1963	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-615	-110	-135	110	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGTTTTCCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	112263136	112349715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
tx.19787	chr8	+	2758	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-343	693	-141	112	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTTTTCCCTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	112263130	112349717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
tx.19788	chr8	-	2490	7	ISM	ENSMUSG00000031958.17	ENSMUST00000070004.4	2273	11	1152	-673	-635	-95	3prime_fragment	FALSE	canonical	2	7	junction_4	3.60555127546399	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGTATATTTTGGG	NA	False	NA	NA	False	NA	NA	NA	112355854	112352229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355353_112355617
tx.19789	chr8	+	1799	4	FSM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	-62	-328	-5	-1	multi-exon	FALSE	canonical	3	27	junction_2	24.1430919496424	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTGTTTTTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	112370106	112397642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_112370245_112385017_112385074_112392751_112392837_112396122
tx.1979	chr10	+	3251	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-18	-1	-18	1	multi-exon	FALSE	canonical	3	50	junction_2	27	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGAGTACTGTCCATT	737	False	NA	NA	False	NA	NA	NA	90918900	90934520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_90919159_90929000_90929119_90931645
tx.19790	chr8	+	1873	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	-63	1	-37	-1	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTGTTTTTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	112370074	112397642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
tx.19791	chr8	+	4777	2	ISM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	19506	-63	19475	63	3prime_fragment	FALSE	canonical	3	60	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTTTCTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	112389643	112397706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_112392837_112396122
tx.19792	chr8	-	3119	7	FSM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	0	-3	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.2591687354659	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTACAGAAATGCTTG	NA	False	NA	NA	False	NA	NA	NA	112458768	112437105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112458670
tx.19793	chr8	-	3199	7	FSM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	-57	0	-57	0	multi-exon	FALSE	canonical	3	36	junction_6	42.5597619040959	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTACAGAAATGCTTG	NA	False	NA	NA	False	NA	NA	NA	112470498	112437105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112470320
tx.19794	chr8	-	1241	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-47	-16	-47	16	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	1028	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGGTGCCGTGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	112580970	112495106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
tx.19795	chr8	-	3784	3	NNC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8.5	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTGCGTTGGGAACC	NA	False	NA	NA	False	NA	NA	NA	112603359	112589671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_112593129_112596288_112596391_112603134
tx.19796	chr8	-	3850	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	28	0	28	0	multi-exon	FALSE	canonical	3	19	junction_1	7	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCGTTGGGAACCTT	NA	False	NA	NA	False	NA	NA	NA	112603354	112589669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112593129_112596219_112596391_112603134
tx.19797	chr8	-	3280	6	NIC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	4	3	intron_retention	FALSE	canonical	3	257	junction_2	4.66476151587624	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTGGCTTCTGAACGG	NA	False	NA	NA	False	NA	NA	NA	112660427	112638639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
tx.19798	chr8	-	2896	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	86	2	4	-2	multi-exon	FALSE	canonical	3	251	junction_1	6.79256129077161	431	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTTTCCCTTGGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	112660427	112638644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
tx.19799	chr8	+	962	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	18	697	18	173	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	773	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	NA	NA	NA	112667352	112679547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
tx.198	chr1	-	3105	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	81	2618	9	-164	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTAACCTTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	38036315	38026887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
tx.1980	chr10	+	1229	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020150.10	1328	3	103	-4	-14	4	multi-exon	FALSE	canonical	3	39	junction_2	32.5	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGCTCCATAATATTT	741	False	NA	NA	False	NA	NA	NA	90918904	90938473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_90919159_90929000_90929119_90937616
tx.19800	chr8	-	3132	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	29	-2	29	2	multi-exon	FALSE	canonical	3	33	junction_1	12.5521135891752	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTAACATTTTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	112718905	112693537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
tx.19801	chr8	-	3123	10	NNC	ENSMUSG00000031949.18	novel	3159	10	NA	NA	22	11	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_9	16.2784413971666	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTACTTATTTCA	NA	False	NA	NA	False	NA	NA	NA	112718912	112693528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717020_112718812
tx.19802	chr8	-	2038	14	FSM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	-30	0	-30	0	multi-exon	FALSE	canonical	3	1149	junction_10	189.523538373557	984	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	112737985	112720074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
tx.19803	chr8	+	2247	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	-14	1327	-14	-1327	multi-exon	FALSE	canonical	3	135	junction_1	1.5	129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCATTTTCTTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	112738015	112745833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_112738775_112741968_112742094_112744470
tx.19804	chr8	+	4855	6	FSM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	-12	-1373	-12	0	multi-exon	FALSE	canonical	3	24	junction_1	7.91454357496375	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCAGCCTCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	114362206	114371811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_114362341_114362743_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
tx.19805	chr8	+	5038	5	FSM	ENSMUSG00000078908.11	ENSMUST00000035777.10	4998	5	-41	1	-41	-1	multi-exon	FALSE	canonical	3	34	junction_3	4.52769256906871	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTCAGCCTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	114362425	114371810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
tx.19806	chr8	+	1812	9	FSM	ENSMUSG00000004637.16	ENSMUST00000109108.9	1771	9	-34	-7	6	7	multi-exon	FALSE	canonical	0	0	junction_8	40.6294228361664	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGTGGGTGACTGGTAA	NA	False	NA	NA	False	NA	NA	NA	115166400	115601985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115601340
tx.19807	chr8	+	3819	5	FSM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	-31	-7	16	7	multi-exon	FALSE	canonical	3	16	junction_4	47.8663503935698	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTTTTGGGAATTATT	NA	False	NA	NA	False	NA	NA	NA	115166410	115180565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115177256
tx.19808	chr8	+	1155	8	ISM	ENSMUSG00000004637.16	ENSMUST00000160862.8	1715	9	-22	6428	18	5927	5prime_fragment	FALSE	canonical	3	58	junction_7	25.2303671905787	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGCGGCTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	115166412	115438991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726
tx.19809	chr8	-	7894	6	ISM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	108623	-5675	108623	5675	3prime_fragment	FALSE	canonical	3	115	junction_3	6.82934843158555	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCGTTTGTTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	117351107	117295463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522
tx.1981	chr10	-	5090	6	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1248	junction_5	1149.29219957329	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	90959887	90952652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90959569_90959777
tx.19810	chr8	-	7958	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59831	5675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.8867297786024	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCGTTTGTTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	117399899	117295463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399833
tx.19811	chr8	-	8126	8	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59799	5677	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	56.0444430058568	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTTTGTTTGTGTCCC	NA	False	NA	NA	False	NA	NA	NA	117399931	117295461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117380271_117380432_117399859
tx.19812	chr8	-	8393	7	FSM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	-308	-5674	-308	5674	multi-exon	FALSE	canonical	3	57	junction_6	26.9670580935745	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCCGTTTGTTTGTGT	1461	False	NA	NA	False	NA	NA	NA	117460038	117295464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
tx.19813	chr8	-	7960	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59801	5673	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	72	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCCGTTTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	117399929	117295465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
tx.19814	chr8	-	1424	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	16	19	0	-19	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGGAGAAGCTAATCAAT	NA	False	NA	NA	False	NA	NA	NA	117648178	117615442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
tx.19815	chr8	+	1788	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-19	-1	-9	1	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	232	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	NA	False	NA	NA	NA	117648459	117668243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
tx.19816	chr8	+	4876	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	0	1	0	-1	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	602	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTCTGTGTGAATCTTG	NA	False	NA	NA	False	NA	NA	NA	117670131	117687183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
tx.19817	chr8	-	2990	3	FSM	ENSMUSG00000031847.9	ENSMUST00000070577.7	2976	3	-22	8	-6	-8	multi-exon	FALSE	canonical	2	7	junction_1	2	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAATTGGCTCTCTCA	8519	False	NA	NA	False	NA	NA	NA	117705704	117696340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_117698896_117700190_117700439_117705517
tx.19818	chr8	-	5302	4	ISM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	63	162	63	-162	intron_retention	FALSE	canonical	3	1952	junction_3	93.8982901276104	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	117720213	117708710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862
tx.19819	chr8	-	7042	3	ISM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	73	159	73	-159	intron_retention	FALSE	canonical	3	2132	junction_1	17	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGATTTTTATTTGGA	NA	False	NA	NA	False	NA	NA	NA	117720203	117708707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_117709466_117710546_117710679_117714051
tx.1982	chr10	-	1346	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	49	217	-7	0	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	2474	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	90959872	90952652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
tx.19820	chr8	-	1140	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	61	-162	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	974.020647739165	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	117720215	117708710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_117709466_117710546_117710679_117714051_117714116_117720026
tx.19821	chr8	-	1220	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	61	162	61	-162	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	1171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	117720215	117708710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
tx.19822	chr8	+	3457	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	-153	-652	-153	652	multi-exon	TRUE	canonical	3	16	junction_7	6.18465843842649	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTTCCTAAAAGGGT	NA	False	NA	NA	False	NA	NA	NA	117884720	117932577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
tx.19823	chr8	+	4861	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	-382	-2071	-382	2071	multi-exon	TRUE	canonical	3	28	junction_12	7.20052081449669	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTTGGCCTTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	117983420	118188240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
tx.19824	chr8	+	4327	33	FSM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	-31	2	-31	-2	multi-exon	TRUE	canonical	3	77	junction_7	32.3080872228611	200	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTTCTGTACCTGATCT	NA	False	NA	NA	False	NA	NA	NA	118224998	118361879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
tx.19825	chr8	-	5539	3	FSM	ENSMUSG00000031843.3	ENSMUST00000211818.2	887	3	-11	-4641	5	2312	multi-exon	FALSE	canonical	3	698	junction_1	49.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGATTGTCTCCTTAAGG	NA	False	NA	NA	False	NA	NA	NA	118528677	118516071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_118521411_118525782_118525896_118528590
tx.19826	chr8	-	1066	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	4	-2	4	2	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAAGTAATTTTAGTC	NA	False	NA	NA	False	NA	NA	NA	118528678	118518381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
tx.19827	chr8	+	1195	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	16	-3	-12	3	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	394	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAATGGTGTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	120071242	120075664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
tx.19828	chr8	+	2110	5	FSM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	4	14	4	1	multi-exon	TRUE	canonical	0	0	junction_4	28.3317401512862	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTAAGTCTACTTCAC	1473	False	NA	NA	False	NA	NA	NA	120121620	120137827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_120122210_120128219_120128333_120129172_120129330_120134294_120134445_120136726
tx.19829	chr8	+	4839	12	NIC	ENSMUSG00000031837.15	novel	1976	13	NA	NA	-48	-2	intron_retention	FALSE	canonical	3	44	junction_2	4.70975776254132	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCGTGTCTCTGTCCCT	NA	False	NA	NA	False	NA	NA	NA	120173409	120199377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_120176846_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
tx.1983	chr10	-	4673	4	ISM	ENSMUSG00000019961.18	ENSMUST00000213262.2	788	5	-1675	-2113	-1675	0	intron_retention	FALSE	canonical	3	698	junction_3	82.9337084664613	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	NA	False	NA	NA	NA	90991231	90983432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946
tx.19830	chr8	+	1950	13	FSM	ENSMUSG00000031837.15	ENSMUST00000098363.10	1976	13	24	2	24	-2	multi-exon	FALSE	canonical	3	44	junction_3	4.71625439894367	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCGTGTCTCTGTCCCT	NA	False	NA	NA	False	NA	NA	NA	120173481	120199377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_120174004_120176820_120176846_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
tx.19831	chr8	-	4219	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	-23	-1	-23	1	multi-exon	FALSE	canonical	3	394	junction_22	51.0282088571954	979	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8118	False	NA	NA	False	NA	NA	NA	120285497	120234893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
tx.19832	chr8	-	3157	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	-6	-10	-6	10	multi-exon	TRUE	canonical	3	107	junction_4	18.9274932307477	240	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGAGGGTCTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	120301928	120288717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
tx.19833	chr8	-	3242	15	FSM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	-5	-1	-5	1	multi-exon	FALSE	canonical	1	17	junction_9	12.1866856085832	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTAAAGCCCACT	1059	False	NA	NA	False	NA	NA	NA	120331966	120324712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
tx.19834	chr8	+	1949	10	FSM	ENSMUSG00000024266.9	ENSMUST00000098361.4	1926	10	-21	-2	-21	2	multi-exon	FALSE	canonical	3	9	junction_8	9.71571210608852	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4260	False	NA	NA	False	NA	NA	NA	120339464	120343665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343147_120343269_120343352
tx.19835	chr8	+	2186	9	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-26	2	intron_retention	FALSE	canonical	3	28	junction_5	5.50993421013355	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4255	False	NA	NA	False	NA	NA	NA	120339459	120343665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120343269_120343352
tx.19836	chr8	-	3029	2	ISM	ENSMUSG00000045246.12	ENSMUST00000061828.10	3806	3	2332	0	1998	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCAGGCTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	120360087	120350592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_120353159_120359624
tx.19837	chr8	-	3092	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	-8	1	-8	-1	multi-exon	TRUE	canonical	3	25	junction_5	4.74664220738176	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGGTAGCAGGCTTG	NA	False	NA	NA	False	NA	NA	NA	120505163	120486815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
tx.19838	chr8	-	1625	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	-24	-5	-24	5	multi-exon	FALSE	canonical	3	203	junction_1	12.9185482500507	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGGGTTGTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	120567307	120535955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
tx.19839	chr8	+	2188	5	FSM	ENSMUSG00000031828.10	ENSMUST00000034287.10	2181	5	-11	4	-5	-4	multi-exon	FALSE	canonical	3	4	junction_3	6.86931583201704	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTTGTTTGAATACT	NA	False	NA	NA	False	NA	NA	NA	120588999	120603730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_120589187_120591741_120591819_120596360_120597432_120601113_120601272_120603035
tx.1984	chr10	-	3409	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	-10	-1545	0	0	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	NA	False	NA	NA	NA	91007440	90983432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
tx.19840	chr8	+	3280	14	FSM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	451	-5	-3	0	multi-exon	FALSE	canonical	3	816	junction_3	215.032734538435	1534	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8824	False	NA	NA	False	NA	NA	NA	120637549	120684299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
tx.19841	chr8	+	3275	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	-1	0	-1	0	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	1318	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8826	False	NA	NA	False	NA	NA	NA	120637551	120684299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
tx.19842	chr8	+	2802	11	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	30518	0	-2746	0	3prime_fragment	FALSE	canonical	3	1237	junction_3	101.385206021392	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	120668070	120684299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
tx.19843	chr8	+	4165	15	FSM	ENSMUSG00000031825.17	ENSMUST00000132583.8	4182	15	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_7	1.49318178288335	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTAGCACATCTTTTC	NA	False	NA	NA	False	NA	NA	NA	120719193	120779532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_120719340_120737172_120737491_120740748_120740868_120742012_120742146_120742404_120742521_120745591_120745693_120750306_120750442_120752800_120752862_120755535_120755603_120756004_120756136_120757123_120757168_120757806_120757880_120760298_120760375_120766764_120766899_120777021
tx.19844	chr8	-	2958	8	NIC	ENSMUSG00000031823.15	novel	3069	8	NA	NA	149	-200	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	30.1465806772611	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCAGCCCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	120828072	120807828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827592
tx.19845	chr8	-	2711	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	153	205	153	-205	multi-exon	FALSE	canonical	3	71	junction_3	9.07114735222145	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCCTGCAGCCCTC	NA	False	NA	NA	False	NA	NA	NA	120828068	120807833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
tx.19846	chr8	+	7376	16	FSM	ENSMUSG00000031822.21	ENSMUST00000034279.16	7127	16	-261	12	-261	-12	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGACGAAATTCATCTT	NA	False	NA	NA	False	NA	NA	NA	121214924	121308117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_121215891_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.19847	chr8	+	6555	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	-48	-1897	-48	-13	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGACGAAATTCATCT	NA	False	NA	NA	False	NA	NA	NA	121262547	121308116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.19848	chr8	+	6533	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	10	-2051	10	-13	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGACGAAATTCATCT	NA	False	NA	NA	False	NA	NA	NA	121264177	121308116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.19849	chr8	+	6296	15	NIC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	30	-11	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	32.1296004408675	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACGAAATTCATCTTT	NA	False	NA	NA	False	NA	NA	NA	121264197	121308118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_121264302_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.1985	chr10	-	3529	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	4	0	0	0	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	1206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	NA	False	NA	NA	NA	91007440	90983432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
tx.19850	chr8	+	5963	13	ISM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	28966	-2051	3772	-13	3prime_fragment	FALSE	canonical	3	77	junction_3	18.3687158566467	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGACGAAATTCATCT	NA	False	NA	NA	False	NA	NA	NA	121293133	121308116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.19851	chr8	+	5418	10	ISM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	30743	-2053	-3109	-11	3prime_fragment	FALSE	canonical	3	87	junction_2	16.5178541636872	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACGAAATTCATCTTT	NA	False	NA	NA	False	NA	NA	NA	121294910	121308118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.19852	chr8	+	4757	8	ISM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	33313	-2054	-539	-10	3prime_fragment	FALSE	canonical	3	93	junction_3	13.5194493306525	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACGAAATTCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	121297480	121308119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.19853	chr8	+	3964	6	ISM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	35282	-2047	1382	-17	3prime_fragment	FALSE	canonical	3	93	junction_1	15.4064921380566	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATGTTAAGACGAAATTC	NA	False	NA	NA	False	NA	NA	NA	121299449	121308112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.19854	chr8	+	3442	4	ISM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	37724	-2048	3824	-16	3prime_fragment	FALSE	canonical	3	120	junction_1	6.54896090146283	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTTAAGACGAAATTCA	NA	False	NA	NA	False	NA	NA	NA	121301891	121308113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_121302045_121303014_121303294_121304709_121304814_121305207
tx.19855	chr8	-	1147	4	FSM	ENSMUSG00000031821.12	ENSMUST00000146526.8	3662	4	-116	2631	-62	280	multi-exon	FALSE	canonical	3	1091	junction_3	35.3647658929996	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAGAACGGGTTTAATT	NA	False	NA	NA	False	NA	NA	NA	121315835	121308002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463
tx.19856	chr8	-	1057	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	211	2632	-59	279	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	409	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTAGAACGGGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	121315832	121308003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
tx.19857	chr8	-	4950	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	9	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	594.120324513478	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCTACCTCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	121394817	121380660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121386697_121386757_121387522_121387600_121394495
tx.19858	chr8	-	4300	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	14	-823	combination_of_known_junctions	FALSE	canonical	2	17	junction_3	590.205726844462	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTATTCCAGGAGCT	NA	False	NA	NA	False	NA	NA	NA	121394812	121381475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121386697_121386927_121387522_121387600_121394495
tx.19859	chr8	-	988	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	36	3918	2	1	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	527	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTACACGGTGTACCT	NA	False	NA	NA	False	NA	NA	NA	121394824	121384570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
tx.1986	chr10	-	3773	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	173	junction_1	318.417266421838	414	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTGTGTGGTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	91007441	90996278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
tx.19860	chr8	+	683	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	62	0	23	0	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	1392	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	121395022	121400946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
tx.19861	chr8	+	2843	9	FSM	ENSMUSG00000041515.11	ENSMUST00000047737.10	2847	9	0	4	0	-4	multi-exon	TRUE	canonical	3	23	junction_1	7.56637297521078	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAATGTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	121463096	121483429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
tx.19862	chr8	+	2473	7	NNC	ENSMUSG00000041515.11	novel	764	4	NA	NA	-674	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	15.0489940601431	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTTGTTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	121471544	121483433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_121471582_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
tx.19863	chr8	-	1330	10	FSM	ENSMUSG00000031816.16	ENSMUST00000133037.8	1060	10	24	-294	11	0	multi-exon	FALSE	canonical	3	29	junction_2	18.6494629717802	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTGTATGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	121835107	121824295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
tx.19864	chr8	-	1525	9	NIC	ENSMUSG00000031816.16	novel	1060	10	NA	NA	6	-1	intron_retention	FALSE	canonical	3	48	junction_6	14.260412862186	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTTGTATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	121835076	121824296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
tx.19865	chr8	-	1779	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	12	2567	-4	1992	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	225	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGACCGGTGCCTGTGGC	NA	False	NA	NA	False	NA	NA	NA	122305533	122278745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
tx.19866	chr8	-	1684	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	12	1985	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	107.929493236113	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGCTGAATGACCGGTGC	NA	False	NA	NA	False	NA	NA	NA	122305517	122278752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122305196
tx.19867	chr8	+	1717	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	101	714	-15	0	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	404	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTGATGTCTCATTG	9946	False	NA	NA	False	NA	NA	NA	122317200	122324785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
tx.19869	chr8	-	7438	13	FSM	ENSMUSG00000061410.7	ENSMUST00000046386.5	7444	13	1	5	1	-5	multi-exon	FALSE	canonical	3	23	junction_1	7.00545422430901	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATGTTCACCATTCT	NA	False	NA	NA	False	NA	NA	NA	122379639	122325446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_122329071_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
tx.1987	chr10	-	3264	14	NIC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	-16	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	47.0005665331586	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTGAGCTTGAACCT	NA	False	NA	NA	False	NA	NA	NA	92558241	92520606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
tx.19870	chr8	-	4696	2	ISM	ENSMUSG00000061410.7	ENSMUST00000046386.5	7444	13	48022	5	-365	-5	3prime_fragment	FALSE	canonical	3	23	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATGTTCACCATTCT	NA	False	NA	NA	False	NA	NA	NA	122331618	122325446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_122329071_122330546
tx.19871	chr8	-	2660	11	NNC	ENSMUSG00000061410.7	novel	625	6	NA	NA	-6	579	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	10.6470653233649	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCCCTCTTTGACGTG	NA	False	NA	NA	False	NA	NA	NA	122379646	122332373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_122332815_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
tx.19872	chr8	-	2054	12	FSM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	7	17	7	3	multi-exon	FALSE	canonical	3	124	junction_5	29.2453287927892	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCTTTCTTCTACAGA	443	False	NA	NA	False	NA	NA	NA	122556301	122523068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
tx.19873	chr8	-	3510	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	7	0	7	0	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	5089	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	122634426	122607888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
tx.19874	chr8	-	1518	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20933	-712	3503	712	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCTCCCCAACTGACT	NA	False	NA	NA	False	NA	NA	NA	122650710	122642152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
tx.19875	chr8	-	1604	3	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20938	-654	3508	654	intron_retention	FALSE	canonical	3	94	junction_1	2	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAACAAAAATCCAAA	NA	False	NA	NA	False	NA	NA	NA	122650705	122642210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_122643247_122644726_122644883_122650293
tx.19876	chr8	+	2236	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	67.3046040195039	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	122677275	122752917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
tx.19877	chr8	+	2215	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	75	-1	-8	1	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	122677305	122752917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
tx.19878	chr8	+	2333	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	122677304	122752917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
tx.19879	chr8	+	3406	10	FSM	ENSMUSG00000049577.16	ENSMUST00000054052.15	3390	10	-16	0	-16	0	multi-exon	FALSE	canonical	3	32	junction_1	9.32274531706801	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGGAGGCCCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	123008863	123063990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123009262_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
tx.1988	chr10	-	3503	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	31	0	15	0	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	314	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTCTGAGCTTGAACC	NA	False	NA	NA	False	NA	NA	NA	92558251	92520607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
tx.19880	chr8	+	3717	18	FSM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	-12	0	-12	0	multi-exon	FALSE	canonical	3	173	junction_3	41.8252254144417	397	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	927	False	NA	NA	False	NA	NA	NA	123103369	123144099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
tx.19881	chr8	+	3481	17	ISM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	6823	0	6785	0	3prime_fragment	FALSE	canonical	3	173	junction_2	42.9162975307749	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	7762	False	NA	NA	False	NA	NA	NA	123110204	123144099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
tx.19882	chr8	-	748	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	-3	-1	-3	1	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACAAGAAATTCTCCATA	NA	False	NA	NA	False	NA	NA	NA	123159672	123151513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
tx.19883	chr8	-	1759	10	FSM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	-3	0	-3	0	multi-exon	FALSE	canonical	3	183	junction_4	22.2211110833319	208	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	123170164	123160339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
tx.19884	chr8	-	1794	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	-10	-1	-10	1	multi-exon	FALSE	canonical	3	110	junction_3	7.81280999384984	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGAGCCTTGGTCCTGGGT	9971	False	NA	NA	False	NA	NA	NA	123202813	123192884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
tx.19885	chr8	+	1699	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	22	1345	22	3	multi-exon	FALSE	canonical	3	114	junction_5	16.7624458787116	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8884	False	NA	NA	False	NA	NA	NA	123202903	123208486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
tx.19886	chr8	-	8196	51	FSM	ENSMUSG00000014444.18	ENSMUST00000156333.9	8219	51	5	18	5	5	multi-exon	FALSE	canonical	3	43	junction_46	25.1307699842245	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	6116	False	NA	NA	False	NA	NA	NA	123278063	123208454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
tx.19887	chr8	+	2197	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	-2	-6	-2	6	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	1057	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGTCACCGTAAAATCT	2584	False	NA	NA	False	NA	NA	NA	123294751	123299873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
tx.19888	chr8	-	925	4	ISM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	55	0	1	0	intron_retention	FALSE	canonical	0	0	junction_3	665.62518648928	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTTCTCCTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	123303574	123301375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253
tx.19889	chr8	-	1259	5	FSM	ENSMUSG00000006589.9	ENSMUST00000213029.2	929	5	-51	-279	5	0	multi-exon	FALSE	canonical	3	286	junction_3	493.303152229945	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTTCTCCTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	123303643	123301375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123303361_123303491
tx.1989	chr10	-	3027	20	NIC	ENSMUSG00000020014.19	novel	1794	12	NA	NA	-4	11	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	0.223296878269436	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAGGAACCTCACAAAAT	NA	False	NA	NA	False	NA	NA	NA	92917484	92857561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_92857932_92860874_92860997_92861312_92861400_92864453_92864581_92864901_92865031_92868747_92868825_92870532_92870684_92871280_92871416_92873675_92873759_92874674_92874841_92874929_92875112_92879090_92879290_92880888_92880991_92881115_92881230_92883795_92883940_92897323_92897383_92900942_92901115_92902568_92902713_92905690_92905797_92917126
tx.19890	chr8	-	861	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	-11	-1	8	-1	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	433	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	NA	False	NA	NA	NA	123303640	123301374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
tx.19891	chr8	+	909	4	NIC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	-16	-1071	intron_retention	FALSE	canonical	3	528	junction_1	87.3473271231327	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTACGTTGTCCTGTGTC	5500	False	NA	NA	False	NA	NA	NA	123338362	123342328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_123338433_123339804_123339978_123340659_123341127_123342129
tx.19892	chr8	+	601	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	-12	1070	-6	-1070	multi-exon	FALSE	canonical	3	528	junction_1	75.9884859699152	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACGTTGTCCTGTGTCA	5510	False	NA	NA	False	NA	NA	NA	123338372	123342329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
tx.19893	chr8	+	2206	10	FSM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	8.97458689169274	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGACCTGTGAGCTGTG	9534	False	NA	NA	False	NA	NA	NA	123502243	123544619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
tx.19894	chr8	+	2246	10	FSM	ENSMUSG00000015016.9	ENSMUST00000212790.2	2171	10	-73	-2	0	2	multi-exon	FALSE	canonical	3	16	junction_1	7.64489662745314	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACCTGTGAGCTGTGAG	9534	False	NA	NA	False	NA	NA	NA	123502243	123544621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123502368_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
tx.19895	chr8	+	4961	2	FSM	ENSMUSG00000110440.2	ENSMUST00000212728.2	1097	2	2	-3866	2	3866	multi-exon	FALSE	canonical	1	3	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTCTTTGCTAGTCCA	NA	False	NA	NA	False	NA	NA	NA	123597289	123632062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123597547_123627358
tx.19896	chr8	-	9218	13	FSM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-268	-495	-11	495	multi-exon	TRUE	canonical	3	162	junction_12	93.1657349386923	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCACTGTCCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	123769027	123610065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
tx.19897	chr8	-	9324	14	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	-20	495	intron_retention	FALSE	canonical	3	57	junction_10	113.267448072689	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCACTGTCCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	123769036	123610065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
tx.19898	chr8	-	5890	5	ISM	ENSMUSG00000035569.18	ENSMUST00000098333.5	7995	13	21805	-824	5598	495	3prime_fragment	FALSE	canonical	3	382	junction_1	9.9373034571759	276	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCACTGTCCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	123620921	123610065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377
tx.19899	chr8	-	4233	4	ISM	ENSMUSG00000035569.18	ENSMUST00000098333.5	7995	13	25464	-814	9257	485	intron_retention	FALSE	canonical	3	382	junction_1	6.18241233033047	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTACATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123617262	123610075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266
tx.199	chr1	+	4129	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	112	3556	-7	2	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	724	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCTACAGATTTTGTG	1401	False	NA	NA	False	NA	NA	NA	38037202	38091104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
tx.1990	chr10	+	3834	17	FSM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-214	-5	-199	5	multi-exon	FALSE	canonical	3	213	junction_16	22.6329405955126	315	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGAGTCACTGTTC	NA	False	NA	NA	False	NA	NA	NA	92996537	93077195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
tx.19900	chr8	-	2765	7	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-268	13193	-11	5	5prime_fragment	FALSE	canonical	3	162	junction_6	36.6409000374657	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGTTTTCTCTA	NA	False	NA	NA	False	NA	NA	NA	123769027	123623753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
tx.19901	chr8	-	5942	4	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-277	19601	-20	2640	5prime_fragment	FALSE	canonical	3	162	junction_3	28.1937739383873	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCACTGTGAGAAAACAC	NA	False	NA	NA	False	NA	NA	NA	123769036	123630161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123635546_123642639_123642785_123701467_123701532_123768687
tx.19902	chr8	+	2569	17	FSM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	322	5	-7	0	multi-exon	FALSE	canonical	3	204	junction_8	27.3615120881504	344	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	NA	False	NA	NA	NA	123792239	123824494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
tx.19903	chr8	+	3874	18	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-8	1166	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	79.4584176686668	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGTCCAATCTGCC	NA	False	NA	NA	False	NA	NA	NA	123792238	123825665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_123792449_123792965_123793099_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
tx.19904	chr8	+	740	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	36	4	36	-4	multi-exon	FALSE	canonical	3	17818	junction_5	2681.35350895774	2993	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	123829124	123831979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
tx.19905	chr8	+	2307	9	NIC	ENSMUSG00000034796.15	novel	3018	14	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	6.93609219950254	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACAGCCTGTGCCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	123853198	123861919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_123853474_123853559_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
tx.19906	chr8	+	2284	7	NNC	ENSMUSG00000034796.15	novel	2398	15	NA	NA	-25	0	intron_retention	FALSE	canonical	1	1	junction_1	7.95822425754221	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTGTGCCTTTCTTGC	NA	False	NA	NA	False	NA	NA	NA	123853230	123861921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_123854179_123855335_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
tx.19907	chr8	+	1113	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	2	0	2	0	multi-exon	FALSE	canonical	2	12	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACATGGTGGTGTGTCT	3330	False	NA	NA	False	NA	NA	NA	123899585	123905504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123899783_123904588
tx.19908	chr8	-	2144	6	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.847163982072	557	2	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTCAGACTTTTTTTTT	9745	False	NA	NA	False	NA	NA	NA	123939499	123931003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123939379
tx.19909	chr8	+	1635	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	11	-4	-1	4	multi-exon	FALSE	canonical	3	205	junction_10	22.2279853638006	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTTGGCAATCCTTTA	2136	False	NA	NA	False	NA	NA	NA	123951591	123958993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
tx.1991	chr10	+	4381	16	ISM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-211	-11	-196	11	intron_retention	FALSE	canonical	3	223	junction_1	19.4712323413	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCACTGTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	92996540	93077201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
tx.19910	chr8	+	1607	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	-22	-5	2	5	multi-exon	FALSE	canonical	3	85	junction_1	49.2958754190788	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTGGCAATCCTTTAA	2127	False	NA	NA	False	NA	NA	NA	123951582	123958994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
tx.19911	chr8	-	2785	15	FSM	ENSMUSG00000001062.19	ENSMUST00000122363.8	2952	15	167	0	-5	0	multi-exon	FALSE	canonical	1	6	junction_9	6.2274081482506	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATGTGACTTGTTCGTT	2216	False	NA	NA	False	NA	NA	NA	123980920	123969094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
tx.19912	chr8	-	1776	6	ISM	ENSMUSG00000001062.19	ENSMUST00000155869.8	2728	15	6978	1	-201	0	3prime_fragment	FALSE	canonical	3	11	junction_3	6.79411510058521	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCATGTGACTTGTTC	9266	False	NA	NA	False	NA	NA	NA	123973870	123969097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463
tx.19913	chr8	+	4056	10	NIC	ENSMUSG00000001065.16	novel	4111	10	NA	NA	-18	7	intron_retention	FALSE	canonical	3	9	junction_5	5.45237517617124	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTACTGTTTGGAGGT	1692	False	NA	NA	False	NA	NA	NA	123980991	123996491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985097_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994439_123994508
tx.19914	chr8	+	4019	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	44	8	-32	-6	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGCTGCCCAGAGTTG	1678	False	NA	NA	False	NA	NA	NA	123980977	123996476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
tx.19915	chr8	-	2820	12	ISM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	41868	-2	-110	2	3prime_fragment	FALSE	canonical	3	127	junction_9	19.8652485303747	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGGCCTTATTGTTC	NA	False	NA	NA	False	NA	NA	NA	124003447	123995036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870
tx.19916	chr8	-	4384	42	ISM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	404	0	388	0	3prime_fragment	TRUE	canonical	3	94	junction_17	20.4066919305964	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	NA	False	NA	NA	NA	124044911	123995038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800
tx.19917	chr8	-	4481	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	4	0	4	0	multi-exon	FALSE	canonical	3	94	junction_17	20.5305065860605	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	NA	False	NA	NA	NA	124045311	123995038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
tx.19918	chr8	-	4397	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_38	27.438124646495	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	NA	False	NA	NA	NA	124045323	123995038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039978_124040113_124043101_124043196_124044800_124044911_124045213
tx.19919	chr8	-	4574	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	15	-2	intron_retention	FALSE	canonical	3	94	junction_17	20.7630179629934	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGGCCTTAT	NA	False	NA	NA	False	NA	NA	NA	124045284	123995041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124040113_124043101_124043196_124044800_124044911_124045213
tx.1992	chr10	-	4211	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	-21	22	-21	-22	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGAGTGTTTGGATTCG	NA	False	NA	NA	False	NA	NA	NA	93147018	93083297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
tx.19920	chr8	+	2312	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-23	3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	20.1212302140163	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTCTCTTTCCCTAC	NA	False	NA	NA	False	NA	NA	NA	124059428	124096257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_124059760_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
tx.19921	chr8	+	2354	15	FSM	ENSMUSG00000010154.8	ENSMUST00000010298.7	2330	15	-21	-3	-21	3	multi-exon	FALSE	canonical	3	49	junction_7	8.26752930544105	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTCTCTTTCCCTAC	NA	False	NA	NA	False	NA	NA	NA	124059430	124096257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
tx.19922	chr8	+	2915	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-22	2	intron_retention	FALSE	canonical	3	49	junction_7	8.53811503108407	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTCTCTTTCCCTA	NA	False	NA	NA	False	NA	NA	NA	124059429	124096256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
tx.19923	chr8	+	2651	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	-60	-9	10	5	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	124100501	124130554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
tx.19924	chr8	+	2654	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	4	-9	4	5	multi-exon	TRUE	canonical	3	129	junction_17	98.3685253625717	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	124100495	124130554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
tx.19925	chr8	+	2216	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-39	561	1	100	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	124100523	124128070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
tx.19926	chr8	+	1774	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	89	5	-77	-5	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCTGGTATTGGAGA	NA	False	NA	NA	False	NA	NA	NA	124138251	124148749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
tx.19927	chr8	+	3129	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	-2	0	-2	0	multi-exon	FALSE	canonical	3	130	junction_1	53.2429330273546	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	NA	False	NA	NA	NA	124169722	124190009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
tx.19928	chr8	+	2652	8	ISM	ENSMUSG00000001482.16	ENSMUST00000108830.2	3191	12	10954	-5	7080	-3	3prime_fragment	FALSE	canonical	3	222	junction_7	30.6121224487347	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	NA	False	NA	NA	NA	124181000	124190006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
tx.19929	chr8	+	2514	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-25	1738	-25	563	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	844	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGTCTCAGATAAGACC	7470	False	NA	NA	False	NA	NA	NA	124204616	124228917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
tx.1993	chr10	-	3841	6	FSM	ENSMUSG00000008398.17	ENSMUST00000129827.8	1653	6	-296	-1892	28	-17	multi-exon	FALSE	canonical	2	3	junction_3	17.64086165696	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTGGATTCGAGGGT	NA	False	NA	NA	False	NA	NA	NA	93146969	93083292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_93085971_93090550_93090674_93100741_93100873_93101198_93101543_93120630_93120840_93146613
tx.19930	chr8	+	3484	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	-115	2	-115	-2	multi-exon	FALSE	canonical	3	44	junction_2	0.5	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCTTGCTTATTCTA	NA	False	NA	NA	False	NA	NA	NA	124380552	124390621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124380956_124382230_124382290_124387599
tx.19931	chr8	+	1411	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	11	-3	11	3	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACACTGTCCTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	124532734	124562029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
tx.19932	chr8	+	1388	8	NIC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	159.435483721121	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACACTGTCCTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	124532719	124562029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557127_124559541_124559638_124560753_124560887_124561432
tx.19933	chr8	+	1913	7	NIC	ENSMUSG00000019478.18	novel	1080	7	NA	NA	15	1	intron_retention	FALSE	canonical	0	0	junction_5	169.222486685428	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACACTGTCCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	124532738	124562027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557127_124559541_124559638_124560753
tx.19934	chr8	-	3126	3	FSM	ENSMUSG00000031971.16_ENSMUSG00000085030.2	ENSMUST00000034452.12	2390	3	20	-756	20	756	multi-exon	FALSE	canonical	3	74	junction_2	2	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACCTGATTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	124586249	124566813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_124569258_124571918_124572185_124585833
tx.19935	chr8	-	3636	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	-1	2173	-1	-2173	multi-exon	TRUE	canonical	3	328	junction_14	43.1434815470425	610	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGGATCAACCTGAAGT	NA	False	NA	NA	False	NA	NA	NA	124676005	124626034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
tx.19936	chr8	-	4216	12	NIC	ENSMUSG00000031974.9	novel	4306	13	NA	NA	237	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_2	7.03004179242953	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTGTGTTATGA	7114	False	NA	NA	False	NA	NA	NA	124709624	124679197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
tx.19937	chr8	-	4085	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	221	0	221	0	multi-exon	FALSE	canonical	3	39	junction_3	9.48536885008813	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTGTGTTATGA	7098	False	NA	NA	False	NA	NA	NA	124709640	124679197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
tx.19938	chr8	-	2983	5	FSM	ENSMUSG00000038697.16	ENSMUST00000093039.6	2912	5	-63	-8	-63	8	multi-exon	FALSE	canonical	3	323	junction_4	121.207208944023	724	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	4031	False	NA	NA	False	NA	NA	NA	124747810	124723048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599
tx.19939	chr8	-	2998	5	FSM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	-17	-8	-17	8	multi-exon	FALSE	canonical	3	200	junction_4	173.639713199487	401	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	3688	False	NA	NA	False	NA	NA	NA	124748153	124723048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747927
tx.1994	chr10	+	2027	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	3	-1	3	0	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	429	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	NA	False	NA	NA	NA	93289275	93320737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
tx.19940	chr8	+	6119	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-314	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	48.5083676121457	79	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	124747932	124775243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_124748266_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
tx.19941	chr8	+	6102	10	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	31.2552217859494	168	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	124748230	124775243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
tx.19942	chr8	+	4750	7	ISM	ENSMUSG00000031976.15	ENSMUST00000034457.9	5853	9	5185	1	5185	0	3prime_fragment	FALSE	canonical	3	158	junction_1	18.2460041287583	68	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	124755317	124775243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
tx.19943	chr8	+	4118	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	-5	0	-5	0	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	346	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCCGCTGTCAGTCT	8560	False	NA	NA	False	NA	NA	NA	124958124	125072461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
tx.19944	chr8	+	3974	15	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	63847	0	-128	0	3prime_fragment	FALSE	canonical	3	174	junction_2	15.4373321687977	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCCGCTGTCAGTCT	8874	False	NA	NA	False	NA	NA	NA	125021976	125072461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
tx.19945	chr8	-	3377	7	FSM	ENSMUSG00000050751.15	ENSMUST00000140012.8	3222	7	-152	-3	-152	-1	multi-exon	FALSE	canonical	3	72	junction_6	10.4083299973307	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTAGTATGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	125161229	125095788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125160537
tx.19946	chr8	-	2389	4	ISM	ENSMUSG00000050751.15	ENSMUST00000136892.3	1739	7	16659	-973	-1011	-1	3prime_fragment	FALSE	canonical	3	93	junction_3	5.71547606649408	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTAGTATGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	125103296	125095788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848
tx.19947	chr8	+	2793	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	32	0	-5	0	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	359	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	NA	False	NA	NA	NA	125247537	125278747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
tx.19948	chr8	-	3160	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	145	2	145	-2	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	403	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGATCTGTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	125389963	125362496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
tx.19949	chr8	-	3112	4	NNC	ENSMUSG00000031983.8	novel	3307	4	NA	NA	154	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	120.704413985386	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGATCTGTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	125389954	125362496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_125364704_125365829_125366316_125378109_125378161_125389586
tx.1995	chr10	+	1956	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_16	100.405509988178	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	NA	False	NA	NA	NA	93289262	93320736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823_93318929_93320524
tx.19950	chr8	-	3311	23	FSM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	-4	-6	-1	5	multi-exon	FALSE	canonical	3	107	junction_6	114.790718661872	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	125448721	125398065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19951	chr8	-	3314	23	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	3	143	junction_17	103.32721034023	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	125448721	125398065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19952	chr8	-	3155	21	FSM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	1	-8	-1	5	multi-exon	FALSE	canonical	3	213	junction_17	74.4114238541368	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	125448721	125398065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19953	chr8	-	3152	21	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	3	107	junction_6	93.2745410066434	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	125448721	125398065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19954	chr8	-	2929	19	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	125	junction_15	88.9418592170619	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	125448724	125398066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19955	chr8	-	2927	19	FSM	ENSMUSG00000037300.20	ENSMUST00000231984.2	2905	19	-17	-5	-2	5	multi-exon	FALSE	canonical	3	107	junction_6	106.569342173807	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	125448724	125398065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19956	chr8	-	1714	14	ISM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	0	8654	0	-448	5prime_fragment	FALSE	canonical	3	213	junction_10	81.4508963775725	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGCCTCCAGTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	125448722	125406727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19957	chr8	-	1986	16	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	-7	8545	-2	-337	5prime_fragment	FALSE	canonical	3	143	junction_10	122.703146749471	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATATAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	125448724	125406616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19958	chr8	-	1489	12	ISM	ENSMUSG00000037300.20	ENSMUST00000041614.15	3038	18	-13	8653	-2	-447	5prime_fragment	FALSE	canonical	3	125	junction_8	104.246529165125	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTCCAGTTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	125448724	125406726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19959	chr8	-	1781	8	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	-10	22597	-5	1731	5prime_fragment	FALSE	canonical	3	143	junction_2	154.949629735285	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTTATGCATGCTT	NA	False	NA	NA	False	NA	NA	NA	125448727	125420668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.1996	chr10	+	2320	20	FSM	ENSMUSG00000020017.15	ENSMUST00000129421.8	5319	20	287	2712	252	-74	multi-exon	FALSE	canonical	1	3	junction_2	3.06530942706548	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACAATTCCATAGGTT	NA	False	NA	NA	False	NA	NA	NA	93324916	93352454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_93325240_93325735_93325797_93325901_93325930_93326608_93326684_93326776_93326850_93326960_93327028_93327671_93327710_93328314_93328441_93330472_93330613_93332444_93332493_93333336_93333485_93334620_93334717_93334817_93334877_93336478_93336560_93339123_93339190_93339265_93339432_93343276_93343412_93349895_93350005_93350120_93350191_93352043
tx.19960	chr8	-	1684	5	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	180.045133230532	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAGTCATTTAATTCCT	NA	False	NA	NA	False	NA	NA	NA	125448721	125434715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_125435912_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.19961	chr8	+	2431	6	NNC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	40.7950977447046	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGTAACTAAGGTTGTC	NA	False	NA	NA	False	NA	NA	NA	125448893	125460855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125459256
tx.19962	chr8	+	1143	6	FSM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	16	6	-4	-6	multi-exon	FALSE	canonical	3	19	junction_5	35.5111250173801	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTAACTAAGGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	125448893	125460856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460545
tx.19963	chr8	+	3005	5	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	17	8	-3	-8	intron_retention	FALSE	canonical	3	83	junction_2	14.0890028036054	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGTAACTAAGGTTGT	NA	False	NA	NA	False	NA	NA	NA	125448894	125460854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535
tx.19964	chr8	+	2890	5	ISM	ENSMUSG00000031982.6	ENSMUST00000212036.2	891	6	25	-159	25	-8	intron_retention	FALSE	canonical	3	24	junction_2	38.9767558937375	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGTAACTAAGGTTGT	NA	False	NA	NA	False	NA	NA	NA	125448922	125460854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_125449082_125451994_125452115_125455107_125455222_125457577_125457756_125458535
tx.19965	chr8	+	2954	5	NIC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	7	-9	intron_retention	FALSE	canonical	3	24	junction_2	37.5724300518346	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCAGTAACTAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	125448904	125460853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_125449082_125451994_125452115_125455107_125455222_125457530_125457756_125458535
tx.19966	chr8	-	1380	2	FSM	ENSMUSG00000043068.7	ENSMUST00000055257.7	1338	2	-50	8	-50	-8	multi-exon	FALSE	canonical	2	6	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCACCCTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	125478621	125467003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_125468041_125478278
tx.19967	chr8	-	4341	6	NIC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	11	-5	intron_retention	FALSE	canonical	3	1367	junction_2	157.719244228471	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACATGTTGCTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	125589742	125563688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125569159_125587684_125588011_125589623
tx.19968	chr8	-	3768	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	109	-1537	3	-6	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	799	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACATGTTGCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	125589750	125563689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
tx.19969	chr8	+	5212	14	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	34	1	-5	-1	intron_retention	FALSE	canonical	3	573	junction_6	38.1043413327454	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAATGGTCTTATTAA	5154	False	NA	NA	False	NA	NA	NA	125589805	125616795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591
tx.1997	chr10	+	3626	14	NIC	ENSMUSG00000036168.16	novel	3656	16	NA	NA	10	-3	intron_retention	FALSE	canonical	0	0	junction_7	1.73716766009788	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAAGCCTTCTAGATGT	NA	False	NA	NA	False	NA	NA	NA	93385903	93420186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_93386190_93391380_93391446_93398592_93398757_93399066_93399148_93401655_93401808_93403525_93403619_93405737_93405796_93406708_93406782_93409872_93410025_93411134_93411271_93414570_93414754_93415623_93415830_93417594_93417689_93418303
tx.19970	chr8	+	2948	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	31	5	-8	-5	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	965	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACCCAATGGTCTTA	5151	False	NA	NA	False	NA	NA	NA	125589802	125616791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
tx.19971	chr8	+	4469	5	FSM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	-4	-1	-4	1	multi-exon	FALSE	canonical	3	61	junction_4	8.10478253872366	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGATGTGTCTTTCCGG	NA	False	NA	NA	False	NA	NA	NA	125624620	125632901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628632_125629429
tx.19972	chr8	-	3603	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	-18	9	-18	-9	multi-exon	FALSE	canonical	3	265	junction_4	22.6605383872493	406	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCATAACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	125676081	125635334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
tx.19973	chr8	-	3452	4	NIC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	-4	-9	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	128.380510808906	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCATAACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	125676067	125635334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_125637503_125638479_125638548_125642399_125642520_125674971
tx.19974	chr8	+	2350	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	43	-2	-9	2	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	682	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCTGGTTAAGCTTTT	5237	False	NA	NA	False	NA	NA	NA	125739778	125760933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
tx.19975	chr8	+	2482	5	FSM	ENSMUSG00000056820.8	ENSMUST00000212603.2	2169	5	-134	-179	-82	179	multi-exon	FALSE	canonical	3	396	junction_1	23.7631542519086	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGCACACCTCTCTCA	5112	False	NA	NA	False	NA	NA	NA	125739653	125757339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506
tx.19976	chr8	+	1984	2	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCGTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	126054624	126063976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_+_126054863_126062230
tx.19977	chr8	-	6000	20	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	77350	-4	304	4	3prime_fragment	FALSE	canonical	3	164	junction_19	25.4968359342739	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTGTTGCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	126219145	126144808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849
tx.19978	chr8	-	6665	22	FSM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	-75	-4	-23	4	multi-exon	FALSE	canonical	3	164	junction_19	26.9293187551557	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTGTTGCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	126296570	126144808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
tx.19979	chr8	-	6506	22	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-31	5	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_20	48.3676397132274	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGTGTTGCCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	126296578	126144807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219405_126246584_126246646_126296393
tx.1998	chr10	-	454	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	43	364	43	-364	multi-exon	FALSE	canonical	3	2132	junction_3	195.841772867792	406	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTTGTGGACTATTTA	NA	False	NA	NA	False	NA	NA	NA	93425525	93419254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
tx.19980	chr8	+	1122	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	24	9	-6	-9	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATAGACACAGGAGTCC	NA	False	NA	NA	False	NA	NA	NA	126460965	126474965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
tx.19981	chr8	+	1511	4	FSM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	-18	4	-13	-4	multi-exon	FALSE	canonical	3	8	junction_3	41.4273125150814	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCCATGTCTAATTAG	NA	False	NA	NA	False	NA	NA	NA	126460958	126465914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126464793
tx.19982	chr8	-	4253	21	ISM	ENSMUSG00000060212.14	ENSMUST00000047239.13	7236	34	47127	1	-11340	0	3prime_fragment	TRUE	canonical	2	2	junction_9	2.04633819296811	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGTCTGTCTACTGTC	7771	False	NA	NA	False	NA	NA	NA	126577929	126478247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_126479052_126480110_126480560_126485850_126486042_126487446_126487722_126488262_126488494_126489543_126489689_126494955_126495078_126498715_126498950_126500540_126500795_126512010_126512227_126515232_126515292_126528199_126528330_126534738_126534848_126542399_126542578_126545407_126545550_126553657_126553809_126554781_126554875_126564675_126564773_126566322_126566433_126577021_126577114_126577758
tx.19983	chr8	+	2224	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	10	1	10	-1	multi-exon	FALSE	canonical	3	118	junction_2	9	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGGTTTATTACAAC	NA	False	NA	NA	False	NA	NA	NA	126721918	126757423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_126722554_126751750_126752147_126756230
tx.19984	chr8	+	757	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	-9	-1	-9	1	multi-exon	FALSE	canonical	3	239	junction_1	0	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCGTGCTTCTGGCAG	NA	False	NA	NA	False	NA	NA	NA	127149244	127152173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_127149570_127151741
tx.19985	chr8	-	7731	30	FSM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	-21	-1327	-21	1327	multi-exon	FALSE	canonical	3	24	junction_27	8.4550992852775	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTTTGTGGCAAATTA	NA	False	NA	NA	False	NA	NA	NA	127201825	127150740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
tx.19986	chr8	-	2957	17	ISM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	-8	21696	-8	-21696	5prime_fragment	FALSE	canonical	3	24	junction_14	6.3118811577849	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGTGTGGTCAGTAG	NA	False	NA	NA	False	NA	NA	NA	127201812	127173763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
tx.19987	chr8	-	5074	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	0	6	0	-6	multi-exon	FALSE	canonical	3	202	junction_1	0	465	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATGTTTTCCAAGACC	NA	False	NA	NA	False	NA	NA	NA	127320725	127315040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_127318568_127319178
tx.19988	chr8	-	1021	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-4	3885	0	434	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	2632	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGTGCGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	127672594	127661301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
tx.19989	chr8	-	5197	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	1	434	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	2905.22645416842	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGTGCGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	127672593	127661301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127669943_127670143
tx.1999	chr10	+	3883	7	NIC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	-27	1333	intron_retention	FALSE	canonical	3	11	junction_1	4.57043640026736	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACCAAATCTAGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	93669652	93695283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_93669754_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
tx.19990	chr8	-	3245	10	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	2	-9	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	50.1686046137312	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAAAGATGCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	127697797	127673930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127697487_127697660_127697739
tx.19991	chr8	-	3412	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	3	9	2	-9	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAAAGATGCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	127697818	127673930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
tx.19992	chr8	+	3882	21	FSM	ENSMUSG00000025812.19	ENSMUST00000079777.12	3394	21	-172	-316	-9	0	multi-exon	FALSE	canonical	3	22	junction_20	36.1848034401183	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	NA	False	NA	NA	False	NA	NA	NA	127790633	128159622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
tx.19993	chr8	+	5936	24	FSM	ENSMUSG00000025812.19	ENSMUST00000026921.13	4050	24	-406	-1480	-4	-1	multi-exon	FALSE	canonical	3	7	junction_17	35.6545068165681	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	127790638	128338766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
tx.19994	chr8	+	5982	25	FSM	ENSMUSG00000025812.19	ENSMUST00000160272.8	5815	25	-168	1	-5	-1	multi-exon	FALSE	canonical	3	28	junction_17	33.9451917311814	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	127790637	128338766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
tx.19995	chr8	+	4851	16	FSM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	-167	-2	10	2	multi-exon	FALSE	canonical	3	39	junction_15	26.9315180906437	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGTATGTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	127790652	128129060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
tx.19996	chr8	+	4191	14	FSM	ENSMUSG00000025812.19	ENSMUST00000160717.8	4214	14	25	-2	-2	2	multi-exon	FALSE	canonical	3	35	junction_1	34.055645380003	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGTATGTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	128026090	128129060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
tx.19997	chr8	+	3711	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	101	3	-2	-3	multi-exon	TRUE	canonical	3	487	junction_6	37.7685348169905	1258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTTTTGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	129412235	129459678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
tx.19998	chr8	+	2043	5	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	36724	3	-1955	-3	3prime_fragment	FALSE	canonical	3	537	junction_4	29.4310635213884	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTTTTGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	129448858	129459678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
tx.19999	chr8	-	3688	3	NIC	ENSMUSG00000071302.11	novel	2337	4	NA	NA	4	-309	intron_retention	FALSE	canonical	3	10	junction_2	29	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTGGTTATTTGATC	NA	False	NA	NA	False	NA	NA	NA	129960523	129943143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_129946633_129948024_129948086_129960385
tx.2	chr1	-	1166	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	-1	729	-1	501	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTCTCTTAGGGATT	1648	False	NA	NA	False	NA	NA	NA	4855934	4844157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
tx.20	chr1	+	1808	12	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	9	-167	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.4879650744496	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTCTGTTTCATAA	NA	False	NA	NA	False	NA	NA	NA	9618288	9646959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_9618377_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
tx.200	chr1	-	5033	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	6	0	intron_retention	TRUE	canonical	3	30	junction_14	57.1871203128697	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	38168737	38091866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
tx.2000	chr10	-	1973	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	20	2431	-10	8	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	2441	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAATGTGTATGGTTG	NA	False	NA	NA	False	NA	NA	NA	93725656	93696781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
tx.20000	chr8	-	3815	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	-24	-1454	4	-309	multi-exon	FALSE	canonical	3	23	junction_3	18.4451137763426	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTGGTTATTTGATC	NA	False	NA	NA	False	NA	NA	NA	129960523	129943143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
tx.20001	chr8	-	3772	4	FSM	ENSMUSG00000071302.11	ENSMUST00000189965.2	343	4	1	-3430	1	-311	multi-exon	FALSE	canonical	3	6	junction_3	25.9358182185692	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGGCTGGTTATTTGA	NA	False	NA	NA	False	NA	NA	NA	129960886	129943145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960789
tx.20002	chr8	+	508	4	FSM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	-30	656	-30	-656	multi-exon	FALSE	canonical	3	25	junction_3	15.5777619273972	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTGTGGAAATTCTTT	NA	False	NA	NA	False	NA	NA	NA	129990091	130008669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463
tx.20003	chr8	+	2947	4	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-37	2269	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	15.5777619273972	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCGTGGTATC	NA	False	NA	NA	False	NA	NA	NA	129990084	130011594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_129990206_130007503_130007631_130007817_130007879_130008956
tx.20004	chr8	+	5071	5	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-74	4141	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	15.1657508881031	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGCGATGGCTCAGA	NA	False	NA	NA	False	NA	NA	NA	129990047	130013466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_129990206_129993965_129994181_130007503_130007631_130007817_130007879_130008956
tx.20005	chr9	-	7195	5	NNC	ENSMUSG00000042360.13	novel	1128	4	NA	NA	7	5983	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	4.41588043316392	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACTTGAGTCAGAATGG	NA	False	NA	NA	False	NA	NA	NA	3199792	3184287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_3190806_3192311_3192413_3192819_3193049_3197276_3197368_3199536
tx.20006	chr9	+	568	2	Intergenic	novelGene_368	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	405	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGCTTGTGCTCCAC	NA	False	NA	NA	False	NA	NA	NA	3258590	3259351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_+_3258609_3258801
tx.20007	chr9	+	4065	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	2	-464	2	-444	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAGCAAAATTATAGTTA	-6	True	NA	NA	False	NA	NA	NA	3335479	3387393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
tx.20008	chr9	+	3910	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	2	3762	2	-445	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTAGCAAAATTATAGTT	-6	True	NA	NA	False	NA	NA	NA	3335479	3387392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
tx.20009	chr9	+	4029	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	486	-69	-10	69	multi-exon	TRUE	canonical	3	200	junction_7	32.0504576240346	482	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATATCCTGCTCACTG	-1	True	NA	NA	False	NA	NA	NA	3404077	3479305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
tx.2001	chr10	-	1911	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181091.8	1876	11	-24	-11	9	10	multi-exon	FALSE	canonical	3	36	junction_8	660.841047453924	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTGTATGGTTGTA	NA	False	NA	NA	False	NA	NA	NA	93725661	93696779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715436_93715934_93716001_93722855_93722964_93725399
tx.20010	chr9	+	4138	5	FSM	ENSMUSG00000041624.11	ENSMUST00000213060.2	2897	5	-573	-668	-463	668	multi-exon	FALSE	canonical	1	5	junction_4	5.59016994374947	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCAAACTTGCTTCTTAA	-10	True	NA	NA	False	NA	NA	NA	3532314	3761845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395
tx.20011	chr9	-	2723	5	NIC	ENSMUSG00000025894.12	novel	2519	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	350.365077454931	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTTAGGGCTTGACAT	-3	True	NA	NA	False	NA	NA	NA	4309471	4294794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308693_4308920_4309253
tx.20012	chr9	-	2821	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-30	19	-28	-19	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAATAATAATTATGG	14	False	4309513	NA	False	NA	NA	NA	4309499	4294812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
tx.20013	chr9	-	2375	5	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	1	-133	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	348.214732600446	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGACCATCATATTGATGA	2	True	NA	NA	False	NA	NA	NA	4309466	4295097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308733_4308920_4309253
tx.20014	chr9	-	2021	5	ISM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-6	1163	-4	-992	intron_retention	FALSE	canonical	3	643	junction_4	110.637640520756	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCGTCTTAGGGTTTC	-7	True	NA	NA	False	NA	NA	NA	4309475	4295956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693
tx.20015	chr9	-	1684	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-9	1168	-5	-996	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	375	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGTCGTCTTAGGG	-8	True	NA	NA	False	NA	NA	NA	4309476	4295960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
tx.20016	chr9	+	2266	3	FSM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	-119	84	-119	-63	multi-exon	TRUE	canonical	3	30	junction_1	14.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCCAGATTACATAGTAT	NA	False	NA	NA	False	NA	NA	NA	4309713	4331648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_4309935_4316826_4317072_4329848
tx.20017	chr9	+	785	4	FSM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	-110	1638	-108	-1638	multi-exon	FALSE	canonical	3	18	junction_1	18.4571575998762	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGCATTTGTTATCTC	-9	True	NA	NA	False	NA	NA	NA	4309724	4330073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_4309935_4313701_4313807_4316826_4317072_4329848
tx.20018	chr9	+	2809	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	88	junction_1	13	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTCTGAAAGTTTA	-14	True	NA	NA	False	NA	NA	NA	4376552	4386870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_4376624_4383536_4384143_4384738
tx.20019	chr9	+	2740	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	0	-9	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTCTGAAAGTTTA	13	False	NA	NA	False	NA	NA	NA	4383534	4386870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_4384143_4384738
tx.2002	chr10	-	2943	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-50	1586	3	-1586	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTGCTGGGGTTTG	3414	False	NA	NA	False	NA	NA	NA	93871660	93805547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
tx.20020	chr9	-	1905	2	Intergenic	novelGene_369	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	6785397	6780369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_-_6781894_6785016
tx.20021	chr9	+	1243	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	11	1167	11	-2	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATGTCCGTTGAGTGT	-10	True	NA	NA	False	NA	NA	NA	7184530	7207038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
tx.20022	chr9	+	2843	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	64	0	-44	0	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	-12	True	NA	NA	False	NA	NA	NA	7764105	7794334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
tx.20023	chr9	-	3844	6	NIC	ENSMUSG00000057367.13	novel	3130	7	NA	NA	589	-1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	62.474314722132	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	821	False	NA	NA	False	NA	NA	NA	7836217	7818228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505
tx.20024	chr9	-	4864	7	FSM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	-1726	-8	76	-1	multi-exon	FALSE	canonical	3	127	junction_2	23.4781222039204	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	56	True	NA	NA	False	NA	NA	NA	7836982	7818228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
tx.20025	chr9	-	3333	8	FSM	ENSMUSG00000057367.13	ENSMUST00000190341.7	3331	8	-3	1	-3	-1	multi-exon	FALSE	canonical	3	127	junction_2	22.0352222681815	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-23	True	NA	NA	False	NA	NA	NA	7837061	7818228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
tx.20026	chr9	-	3086	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	57.8234861933761	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-31	True	NA	NA	False	NA	NA	NA	7837069	7818228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
tx.20027	chr9	-	2516	9	FSM	ENSMUSG00000032000.18	ENSMUST00000013949.15	2667	9	151	0	-16	0	multi-exon	FALSE	canonical	3	8	junction_2	6.89202437604511	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCTGGGCAGGTTTAT	300	False	7872897	NA	False	NA	NA	NA	7872874	7848699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
tx.20028	chr9	-	2661	9	NIC	ENSMUSG00000032000.18	novel	2667	9	NA	NA	-7	-8	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	7.964766161037	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTGATGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	7873194	7848707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872990
tx.20029	chr9	-	4149	8	FSM	ENSMUSG00000053110.14	ENSMUST00000086580.12	4115	8	-34	0	-26	0	multi-exon	FALSE	canonical	3	104	junction_1	48.6117479712088	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	16	False	NA	NA	False	NA	NA	NA	8004623	7931999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
tx.2003	chr10	-	2942	12	FSM	ENSMUSG00000036099.17	ENSMUST00000119818.8	11138	12	30	8166	-10	-1588	multi-exon	FALSE	canonical	3	20	junction_7	12.5467719993354	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGATGTGTGCTGGGGTT	3425	False	NA	NA	False	NA	NA	NA	93871649	93805549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
tx.20030	chr9	-	4213	9	FSM	ENSMUSG00000053110.14	ENSMUST00000065353.13	4171	9	-42	0	-42	0	multi-exon	FALSE	canonical	3	70	junction_4	65.3241915372858	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	0	True	NA	NA	False	NA	NA	NA	8004639	7931999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
tx.20031	chr9	-	6008	25	NNC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-257	-247	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_24	14.1729765359606	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGCAGTGTGAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	9239363	8994576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630_9239022_9239241
tx.20032	chr9	-	5981	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-8	-245	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	115	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGTGAAGAAGCAT	1	True	NA	NA	False	NA	NA	NA	9239114	8994574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
tx.20033	chr9	-	3608	17	NIC	ENSMUSG00000050730.18	novel	1868	16	NA	NA	-24	1614	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	7.44038809471656	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACCTTTCTCCCCTGA	NA	False	NA	NA	False	NA	NA	NA	9239130	9009624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
tx.20034	chr9	+	4251	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	1	-1883	1	1586	multi-exon	FALSE	canonical	3	27	junction_1	5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTTCAGAATTTTCTG	NA	False	NA	NA	False	NA	NA	NA	13246610	13256307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_13246677_13251695_13252424_13252850
tx.20035	chr9	+	4575	8	FSM	ENSMUSG00000079084.13	ENSMUST00000217444.4	4816	8	75	166	1	-2	multi-exon	FALSE	canonical	2	4	junction_3	11.4944529656523	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTCTTTCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	13246610	13292701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_13246677_13251695_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700
tx.20036	chr9	+	4131	3	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	39443	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1	12	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTCAGAAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	13613198	13620687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_13613418_13613539_13613652_13616887
tx.20037	chr9	+	3193	17	NIC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_4	125.44469336624	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	13660475	13717776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_13660697_13671713_13671785_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
tx.20038	chr9	+	3123	16	FSM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	-18	1	-2	0	multi-exon	FALSE	canonical	3	121	junction_3	100.823057327622	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	13660474	13717776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
tx.20039	chr9	+	3088	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	-1	1	-1	0	multi-exon	FALSE	canonical	3	129	junction_2	100.813138473559	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	13660475	13717776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
tx.2004	chr10	+	4660	21	FSM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	50	3334	50	2134	multi-exon	FALSE	canonical	3	10	junction_10	4.04474968323134	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTTTCTGAGACTCAC	NA	False	NA	NA	False	NA	NA	NA	93871912	93977867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
tx.20040	chr9	+	3017	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	770	1	-1	0	multi-exon	FALSE	canonical	3	316	junction_2	44.4939803312121	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	13660475	13717776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
tx.20041	chr9	-	2513	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	10	0	10	0	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCTAACAAAGGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	13738393	13719089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
tx.20042	chr9	-	2433	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	-141	-30	11	0	multi-exon	FALSE	canonical	3	58	junction_3	63.5314639653475	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCTAACAAAGGCTTTA	NA	False	NA	NA	False	NA	NA	NA	13738392	13719090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
tx.20043	chr9	+	3684	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	6	12	6	-12	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCTGTAATGAATGAC	NA	False	NA	NA	False	NA	NA	NA	13739017	13757825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
tx.20044	chr9	+	3739	11	FSM	ENSMUSG00000037808.14	ENSMUST00000156680.2	3760	11	10	11	-9	-11	multi-exon	FALSE	canonical	2	6	junction_8	54.6652540467892	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGTAATGAATGACT	NA	False	NA	NA	False	NA	NA	NA	13739021	13757826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935_13751038_13755324
tx.20045	chr9	+	3804	11	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	54.2867387121385	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCTGTAATGAATGAC	NA	False	NA	NA	False	NA	NA	NA	13739031	13757825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13742929_13743064_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
tx.20046	chr9	+	1789	5	ISM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	23	17570	23	-1077	5prime_fragment	FALSE	canonical	3	46	junction_3	6.75925291729789	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTCTTTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	14187619	14226827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791
tx.20047	chr9	+	2136	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	23	6966	23	318	multi-exon	FALSE	canonical	3	39	junction_6	6.49976257875985	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCGCTCAAGCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	14187619	14237431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
tx.20048	chr9	-	4246	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	208	16	-51	-16	multi-exon	FALSE	canonical	3	20	junction_1	0	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTCTGTGGGCTATAT	NA	False	NA	NA	False	NA	NA	NA	14292330	14265301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_14269184_14291966
tx.20049	chr9	+	1023	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	58	30	28	-15	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACTGTCCCCAACTT	NA	False	NA	NA	False	NA	NA	NA	14411970	14421843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
tx.2005	chr10	+	7516	20	ISM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	7517	2	7517	-2	3prime_fragment	FALSE	canonical	3	10	junction_9	3.88476675520967	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTGGTGTGAAGTCCT	NA	False	NA	NA	False	NA	NA	NA	93879379	93981199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
tx.20050	chr9	-	9074	15	NNC	ENSMUSG00000013076.18	novel	3046	14	NA	NA	-18028	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	4.0082822418852	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGGCTCCTCTTTTAC	224	False	NA	NA	False	NA	NA	NA	14574380	14453265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14545197_14545249_14556215_14556343_14574164
tx.20051	chr9	-	3713	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	-1536	-424	-2	2	multi-exon	FALSE	canonical	3	189	junction_1	0	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGTGTTTGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	14695796	14691080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_14692908_14693910
tx.20052	chr9	-	2240	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	1	-1204	1	2	multi-exon	FALSE	canonical	3	83	junction_2	53	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGTGTTTGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	14695821	14691080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_14692908_14693910_14694259_14695756
tx.20053	chr9	-	2219	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	293	167	-13	2	multi-exon	FALSE	canonical	3	72	junction_2	58.5	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGTGTTTGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	14695859	14691080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_14692908_14693910_14694259_14695815
tx.20054	chr9	+	3253	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	25	8	3	-8	multi-exon	TRUE	canonical	3	154	junction_1	46.9081733954962	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATAAGATAAATAATCT	NA	False	NA	NA	False	NA	NA	NA	14695974	14745934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
tx.20055	chr9	+	2478	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	6	-682	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	78.7000282366178	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	14695977	14745260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_14696054_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
tx.20056	chr9	+	3260	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	22	-6	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAAGATAAATAATCTCA	NA	False	NA	NA	False	NA	NA	NA	14696019	14745936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
tx.20057	chr9	-	2093	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	-18	3657	-18	0	multi-exon	FALSE	canonical	3	51	junction_1	8.13557004763649	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCCTCTGTGCCCTTA	NA	False	NA	NA	False	NA	NA	NA	14956792	14917080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
tx.20058	chr9	+	1983	4	FSM	ENSMUSG00000031937.8	ENSMUST00000034413.8	1991	4	8	0	8	0	multi-exon	FALSE	canonical	3	5	junction_3	3.68178700572909	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGCAAGTTTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	15150348	15170712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_15150655_15168525_15168853_15168946_15169088_15169503
tx.20059	chr9	-	2441	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	5	1518	5	138	multi-exon	TRUE	canonical	3	139	junction_7	15.3563726777577	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAAGTATTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	15191222	15173164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
tx.2006	chr10	+	3773	13	NIC	ENSMUSG00000005897.15	novel	3732	14	NA	NA	-158	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	10.3289641300568	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTATCCTGTCAATGT	NA	False	NA	NA	False	NA	NA	NA	93983726	94033078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94024010_94024151_94026480_94026619_94028696_94028803_94031038
tx.20060	chr9	-	2637	9	FSM	ENSMUSG00000031938.16	ENSMUST00000178977.9	2650	9	15	-2	-13	0	multi-exon	FALSE	canonical	3	15	junction_1	3.64005494464026	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCTTTTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	15217448	15194632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217332
tx.20061	chr9	+	1344	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-33	-306	17	0	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	9089	False	NA	NA	False	NA	NA	NA	15217526	15223400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
tx.20062	chr9	+	1253	12	FSM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	-29	-8	17	0	multi-exon	FALSE	canonical	3	217	junction_9	145.029663537447	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9089	False	NA	NA	False	NA	NA	NA	15217526	15228274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
tx.20063	chr9	+	2652	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	9	-1	intron_retention	FALSE	canonical	3	217	junction_8	150.386202824594	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	9131	False	NA	NA	False	NA	NA	NA	15217568	15228271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
tx.20064	chr9	-	5435	14	ISM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	22761	-6	-1528	1	3prime_fragment	TRUE	canonical	3	110	junction_2	29.0025503877518	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	NA	False	NA	NA	False	NA	NA	NA	15246323	15228209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231
tx.20065	chr9	-	7576	28	FSM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	35	-6	35	1	multi-exon	FALSE	canonical	3	110	junction_2	25.4723282440542	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	9742	False	NA	NA	False	NA	NA	NA	15269049	15228209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
tx.20066	chr9	-	8309	24	ISM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	35	4280	35	1799	5prime_fragment	FALSE	canonical	3	121	junction_16	23.6825252830166	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGGTAATTATTTT	9742	False	NA	NA	False	NA	NA	NA	15269049	15232495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
tx.20067	chr9	-	8072	23	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	36	1800	intron_retention	FALSE	canonical	3	46	junction_3	35.5783386601761	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGGTAATTATTTTG	9743	False	NA	NA	False	NA	NA	NA	15269048	15232494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
tx.20068	chr9	-	8070	23	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	34	4103	34	1799	5prime_fragment	FALSE	canonical	3	46	junction_3	33.1414449277763	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGGTAATTATTTT	9741	False	NA	NA	False	NA	NA	NA	15269050	15232495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
tx.20069	chr9	-	8292	24	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	56	1800	intron_retention	FALSE	canonical	3	87	junction_2	27.1516082372237	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGGTAATTATTTTG	9763	False	NA	NA	False	NA	NA	NA	15269028	15232494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
tx.2007	chr10	+	3836	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-102	-2	-102	2	multi-exon	FALSE	canonical	3	23	junction_4	6	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCTGTATCCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	93983782	94033075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
tx.20070	chr9	+	3051	10	NNC	ENSMUSG00000043885.15	novel	6539	11	NA	NA	-2	178	intron_retention	FALSE	canonical	1	3	junction_3	3.09120616516523	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATAGCAAAGTACACCTC	NA	False	NA	NA	False	NA	NA	NA	15621031	15650053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_15621134_15630928_15631053_15631995_15633289_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
tx.20071	chr9	+	5540	11	FSM	ENSMUSG00000043885.15	ENSMUST00000061568.9	6539	11	20	979	20	-979	multi-exon	FALSE	canonical	2	6	junction_1	2.41039415863879	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGCCTATTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	15621054	15653678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
tx.20072	chr9	+	5182	9	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-4	1988	intron_retention	FALSE	canonical	3	795	junction_1	63.7411758598788	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8536	False	NA	NA	False	NA	NA	NA	18203591	18225297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
tx.20073	chr9	+	3965	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	146	1678	-29	-1678	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	1101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATTCTGAGTCCTGA	8511	False	NA	NA	False	NA	NA	NA	18203566	18227060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
tx.20074	chr9	+	4043	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	3	26	junction_7	65.1161222355877	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	NA	False	NA	NA	NA	19533381	19561027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
tx.20075	chr9	+	4041	9	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	77.4721724233934	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	NA	False	NA	NA	NA	19533381	19561026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_19533582_19535527_19535595_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
tx.20076	chr9	+	4016	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	10	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	65.5076331430162	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTGTTTCCCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	19533381	19561037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
tx.20077	chr9	+	5494	7	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	124	junction_2	35.7848509226398	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	NA	False	NA	NA	NA	19533381	19561026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19556604_19557997
tx.20078	chr9	+	3972	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	NA	False	NA	NA	NA	19533384	19561027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
tx.20079	chr9	+	4031	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	-40	-3	-14	3	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTGATATTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	19533383	19561030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
tx.2008	chr10	+	535	4	FSM	ENSMUSG00000020022.18	ENSMUST00000179990.8	566	4	32	-1	-1	1	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	594	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTTGTGCGTTCAC	NA	False	NA	NA	False	NA	NA	NA	94034897	94056811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
tx.20080	chr9	+	3982	8	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	67.9891948198013	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	NA	False	NA	NA	NA	19533387	19561027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
tx.20081	chr9	-	4705	7	FSM	ENSMUSG00000045519.16	ENSMUST00000068079.14	4751	7	49	-3	49	3	multi-exon	FALSE	canonical	1	1	junction_4	13.5113121330075	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTCAGTATTGACATTT	NA	False	NA	NA	False	NA	NA	NA	20296424	20256428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20260456_20260876_20260960_20261827_20261909_20263133_20263261_20264048_20264138_20265359_20265546_20296312
tx.20082	chr9	-	563	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	45	0	45	0	multi-exon	FALSE	canonical	3	31	junction_1	0.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTCTTGTCATATATT	NA	False	NA	NA	False	NA	NA	NA	20296428	20263876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20264138_20265359_20265546_20296312
tx.20083	chr9	-	6806	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	2	2287	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	21.7942114865619	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGATGGTTCCTTCG	NA	False	NA	NA	False	NA	NA	NA	20371251	20344038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371211
tx.20084	chr9	-	6755	9	ISM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	288	4516	-45	2065	3prime_fragment	FALSE	canonical	3	62	junction_5	6.557438524302	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	20371168	20344260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842
tx.20085	chr9	-	6605	10	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-11	2063	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	19.3964487013015	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGAGTCTTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	20371264	20344262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371201
tx.20086	chr9	-	6697	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	63	4516	63	2065	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	20371393	20344260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
tx.20087	chr9	-	6662	9	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	3	2056	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	25.7038421252543	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTGAGACAGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	20371453	20344269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
tx.20088	chr9	-	3049	9	FSM	ENSMUSG00000059475.14	ENSMUST00000163348.8	2135	9	-16	-898	-12	-220	multi-exon	FALSE	canonical	2	5	junction_8	10.295630140987	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGTCTATGACTTTGC	NA	False	NA	NA	False	NA	NA	NA	20404054	20380223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20382542_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681_20403748_20403993
tx.20089	chr9	-	6173	8	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	18.5659332528968	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	20432703	20406363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432639
tx.2009	chr10	+	5532	4	FSM	ENSMUSG00000020023.19	ENSMUST00000065060.12	5530	4	-4	2	-4	-2	multi-exon	FALSE	canonical	3	5	junction_3	2.05480466765633	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTCAGAGCCCATC	NA	False	NA	NA	False	NA	NA	NA	94350714	94426816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_94350967_94414284_94415202_94418135_94418272_94422589
tx.20090	chr9	-	6416	9	FSM	ENSMUSG00000060510.15	ENSMUST00000068296.8	2266	9	-153	-3997	-144	0	multi-exon	FALSE	canonical	3	22	junction_8	12.1140414395857	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	20432857	20406363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432650
tx.20091	chr9	-	6283	9	FSM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	12.7156399760295	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	20432713	20406363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
tx.20092	chr9	+	2646	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	106	10222	-94	-7	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACAGCAGCTGAGTTTC	NA	False	NA	NA	False	NA	NA	NA	20492726	20506483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
tx.20093	chr9	+	2668	7	FSM	ENSMUSG00000058192.17	ENSMUST00000140668.8	2661	7	-11	4	-11	-4	multi-exon	FALSE	canonical	2	6	junction_4	12.0369800568452	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCAGCTGAGTTTCATG	31	False	NA	NA	False	NA	NA	NA	20492809	20506486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20500752_20500855_20502108_20502181_20502634_20502718_20504456
tx.20094	chr9	-	2376	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	-287	-3	-287	0	multi-exon	TRUE	canonical	3	69	junction_2	12	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	NA	False	NA	NA	NA	20554389	20549081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20550495_20553319_20553393_20553499
tx.20095	chr9	-	1786	4	FSM	ENSMUSG00000066892.15	ENSMUST00000131343.8	761	4	-10	-1015	-1	0	multi-exon	FALSE	canonical	3	9	junction_3	34.3446583263767	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	NA	False	NA	NA	NA	20556064	20549081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20550495_20553319_20553393_20555490_20555595_20555868
tx.20096	chr9	-	2057	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	2	-3	2	0	multi-exon	FALSE	canonical	3	47	junction_2	23	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	NA	False	NA	NA	NA	20556061	20549081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20550495_20553319_20553393_20555490
tx.20097	chr9	+	449	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	1490	175	-13	12	multi-exon	FALSE	canonical	3	1046	junction_4	63.2114507031756	144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGTGTGAGAGTTGTG	NA	False	NA	NA	False	NA	NA	NA	20556103	20558085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
tx.20098	chr9	+	934	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	16	2893	16	-2893	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	935	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGGTCCTGTATCATT	NA	False	NA	NA	False	NA	NA	NA	20563406	20574987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
tx.20099	chr9	+	4095	3	NIC	ENSMUSG00000032171.8	novel	3843	4	NA	NA	19	-2893	intron_retention	FALSE	canonical	3	2626	junction_1	89.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGGTCCTGTATCATT	NA	False	NA	NA	False	NA	NA	NA	20563409	20574987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_20566877_20573593_20573705_20574470
tx.201	chr1	-	4923	23	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	56	-2	intron_retention	FALSE	canonical	3	30	junction_14	42.6752100606313	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	38168826	38091868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
tx.2010	chr10	-	3885	3	FSM	ENSMUSG00000097164.3	ENSMUST00000181906.3	6566	3	-3	2684	-3	-2684	multi-exon	FALSE	canonical	3	9	junction_2	6	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACATATCTCCATTTCT	NA	False	NA	NA	False	NA	NA	NA	94524441	94509570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_94512992_94514192_94514310_94524094
tx.20100	chr9	-	1849	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	47	-1	47	1	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGGGTTGTTTTGTAG	NA	False	NA	NA	False	NA	NA	NA	20657598	20578987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
tx.20101	chr9	-	6110	67	FSM	ENSMUSG00000004098.8	ENSMUST00000004201.8	6119	67	2	7	2	-7	multi-exon	TRUE	canonical	1	1	junction_62	3.84063264799209	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTTCTCTTTTTCTCT	1605	False	NA	NA	False	NA	NA	NA	20726361	20681352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20682275_20682366_20682607_20682882_20682952_20683403_20683517_20683600_20683800_20684380_20684435_20685189_20685226_20685309_20685364_20685611_20685720_20685856_20685911_20686326_20686381_20686528_20686637_20686761_20686816_20687129_20687184_20687387_20687442_20687608_20687663_20688287_20688396_20689772_20689827_20689960_20690015_20690096_20690151_20690311_20690366_20691196_20691305_20693103_20693158_20693782_20693837_20693920_20694029_20694779_20694888_20695964_20696019_20696441_20696532_20696668_20696777_20696868_20696923_20697494_20697549_20697646_20697701_20698385_20698431_20698556_20698611_20698826_20698872_20699846_20699901_20703940_20703995_20704805_20704914_20705006_20705061_20705242_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331_20710386_20710555_20710610_20710704_20710759_20711538_20711593_20712363_20712418_20712511_20712569_20713062_20713147_20713239_20713315_20713753_20713817_20714302_20714345_20714415_20714464_20715932_20716074_20716165_20716280_20718900_20719051_20719655_20719761_20720735_20720893_20720960_20721151_20721235_20721398_20726161
tx.20102	chr9	+	1664	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	12	7	-4	-7	multi-exon	FALSE	canonical	3	59	junction_6	22.3469853694417	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTCAGAGTAATAGCCT	NA	False	NA	NA	False	NA	NA	NA	20779949	20785596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
tx.20103	chr9	+	1804	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	-5	-6	intron_retention	TRUE	canonical	3	88	junction_5	14.0118997046558	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAGAGTAATAGCCTT	NA	False	NA	NA	False	NA	NA	NA	20779948	20785597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784561_20784837
tx.20104	chr9	+	3331	6	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	9	-8	intron_retention	FALSE	canonical	3	88	junction_4	15.3414471286121	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTTCAGAGTAATAGCC	NA	False	NA	NA	False	NA	NA	NA	20779962	20785595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784561_20784837
tx.20105	chr9	-	2219	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1843	-2	1843	2	3prime_fragment	FALSE	canonical	3	97	junction_3	15.9652400197707	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGTCTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	20789180	20785101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687
tx.20106	chr9	-	1228	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1355	-2	1355	2	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGTCTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	20789668	20785101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
tx.20107	chr9	+	1595	11	FSM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	75	0	0	0	multi-exon	FALSE	canonical	3	766	junction_9	65.2172523186925	612	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	NA	False	NA	NA	NA	20799545	20803474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
tx.20108	chr9	+	1676	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	766	junction_8	67.5113159239085	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	NA	False	NA	NA	NA	20799544	20803474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
tx.20109	chr9	+	1616	10	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	143	0	33	0	3prime_fragment	FALSE	canonical	3	766	junction_8	68.2725113238786	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	NA	False	NA	NA	NA	20799613	20803474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
tx.2011	chr10	+	5161	15	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	-6	144	intron_retention	FALSE	canonical	0	0	junction_12	59.0201020753064	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGTGTTTAATTTTC	9498	False	NA	NA	False	NA	NA	NA	94524509	94626199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
tx.20110	chr9	-	1412	9	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	18	0	1	0	intron_retention	FALSE	canonical	3	2349	junction_1	159.342398626354	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5157	False	NA	NA	False	NA	NA	NA	20809901	20805644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379
tx.20111	chr9	-	1083	11	FSM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	18	0	1	0	multi-exon	FALSE	canonical	3	2112	junction_10	212.212370044727	1176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5157	False	NA	NA	False	NA	NA	NA	20809901	20805644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
tx.20112	chr9	-	5245	39	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	3	490	junction_35	108.724460496474	745	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	20864156	20818504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
tx.20113	chr9	-	5248	39	FSM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	119	0	-15	0	multi-exon	FALSE	canonical	3	422	junction_35	116.269340570878	716	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	20864156	20818504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
tx.20114	chr9	-	2799	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	2	3593	2	2295	multi-exon	FALSE	canonical	3	250	junction_1	0	406	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGTGGTTATGTGTG	8096	False	NA	NA	False	NA	NA	NA	20888075	20877249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20879867_20887893
tx.20115	chr9	+	1115	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	164	9	-13	-1	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	549	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAAATGAGCTGGTCA	NA	False	NA	NA	False	NA	NA	NA	20914197	20920126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
tx.20116	chr9	+	2535	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	-4	4	-4	-4	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	733	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTGTGAGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	20927276	20940109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
tx.20117	chr9	-	1114	5	FSM	ENSMUSG00000079681.4	ENSMUST00000115494.3	1010	5	-106	2	-106	0	multi-exon	FALSE	canonical	3	10	junction_1	4.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTTTAATTATGTT	815	False	NA	NA	False	NA	NA	NA	20978495	20973690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20974014_20974189_20974284_20974609_20974693_20977319_20977674_20978235
tx.20118	chr9	-	3549	12	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	416	junction_6	40.55034621939	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	21003295	20985453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
tx.20119	chr9	-	3460	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	10	0	10	0	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	941	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	21003294	20985453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
tx.2012	chr10	+	3100	16	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	-16	146	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	72.0359786649853	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTAATTTTCCT	9488	False	NA	NA	False	NA	NA	NA	94524499	94626201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625606
tx.20120	chr9	-	4793	25	FSM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	-21	-2	-21	0	multi-exon	FALSE	canonical	3	60	junction_24	14.2647949512077	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	NA	False	NA	NA	NA	21042560	21015363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
tx.20121	chr9	-	4700	24	ISM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	2531	-1	-1366	0	3prime_fragment	FALSE	canonical	3	64	junction_20	13.2590875495451	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	NA	False	NA	NA	NA	21040008	21015364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855
tx.20122	chr9	-	1621	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	21	6209	-19	1522	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	1231	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	21061257	21050726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
tx.20123	chr9	+	4351	15	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	5.62429133857986	31	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGTTTCCTGGGATT	1152	False	NA	NA	False	NA	NA	NA	21092899	21124544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
tx.20124	chr9	-	2935	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	237	0	-21	0	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	NA	False	NA	NA	NA	21150130	21141026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
tx.20125	chr9	-	3111	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	37	3	37	-2	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGGCTCTGAATTAA	NA	False	NA	NA	False	NA	NA	NA	21150591	21141028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
tx.20126	chr9	-	3955	5	FSM	ENSMUSG00000003308.16	ENSMUST00000164812.8	3614	5	-6	-335	-6	-1	multi-exon	FALSE	canonical	3	121	junction_3	9.14808723176599	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTGGCTCTGAATTAAC	NA	False	NA	NA	False	NA	NA	NA	21150115	21141027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366
tx.20127	chr9	+	1898	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	3	7	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_8	152.03800694417	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCGTTGTTGACATTTCA	8640	False	NA	NA	False	NA	NA	NA	21176594	21185048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184113_21184207_21184549
tx.20128	chr9	+	1918	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	10	4023	-3	4	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	374	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTTGTTGACATT	8644	False	NA	NA	False	NA	NA	NA	21176598	21185045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
tx.20129	chr9	-	2603	19	FSM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	-7	2	-7	-2	multi-exon	TRUE	canonical	3	91	junction_10	26.4070697604511	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTCCCCATCCCTTCC	NA	False	NA	NA	False	NA	NA	NA	21199272	21184754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
tx.2013	chr10	+	3917	7	FSM	ENSMUSG00000020024.8	ENSMUST00000220052.2	3910	7	-22	15	-6	-15	multi-exon	FALSE	canonical	3	151	junction_6	27.6872413456692	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTAGTTTTGGTTTT	9498	False	NA	NA	False	NA	NA	NA	94524509	94578540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918
tx.20130	chr9	-	1197	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	173	53	18	3	multi-exon	FALSE	canonical	3	236	junction_1	0	132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTGTTTTGTGTGATTA	NA	False	NA	NA	False	NA	NA	NA	21202431	21199758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21200629_21202104
tx.20131	chr9	-	2580	11	FSM	ENSMUSG00000003309.15	ENSMUST00000003397.9	1706	11	-26	-848	0	0	multi-exon	FALSE	canonical	3	12	junction_6	5.23545604508337	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTTGTTTTGTTTTGT	1319	False	NA	NA	False	NA	NA	NA	21223633	21205908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214062_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
tx.20132	chr9	+	3442	22	FSM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	36	0	-5	0	multi-exon	FALSE	canonical	3	79	junction_1	41.7821257447013	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6616	False	NA	NA	False	NA	NA	NA	21232029	21266324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
tx.20133	chr9	+	4121	22	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	-3	0	intron_retention	FALSE	canonical	3	72	junction_21	46.6520385236562	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6618	False	NA	NA	False	NA	NA	NA	21232031	21266324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
tx.20134	chr9	+	3605	23	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_22	56.9185477184737	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6624	False	NA	NA	False	NA	NA	NA	21232037	21266323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
tx.20135	chr9	+	4128	22	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	72	junction_21	38.6895897334347	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5748	False	NA	NA	False	NA	NA	NA	21249135	21266324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
tx.20136	chr9	+	3575	23	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_22	56.4293605073877	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5748	False	NA	NA	False	NA	NA	NA	21249135	21266324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264425_21264977
tx.20137	chr9	+	3447	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	12	-3	12	0	multi-exon	FALSE	canonical	3	114	junction_21	32.3776608971381	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5748	False	NA	NA	False	NA	NA	NA	21249135	21266324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
tx.20138	chr9	+	3723	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	-123	6	9	3	multi-exon	FALSE	canonical	3	922	junction_17	371.198684895057	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCCGTACTTGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	21279175	21313093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
tx.20139	chr9	+	3756	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	-69	-3	15	3	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCCGTACTTGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	21279181	21313093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
tx.2014	chr10	+	3122	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	1	516	1	144	multi-exon	FALSE	canonical	0	0	junction_13	58.1305045183297	239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGTGTTTAATTTTC	9505	False	NA	NA	False	NA	NA	NA	94524516	94626199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
tx.20140	chr9	+	2949	2	FSM	ENSMUSG00000032178.15	ENSMUST00000214200.2	871	2	-1722	-356	-1722	2	multi-exon	FALSE	canonical	3	1346	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	NA	False	NA	NA	NA	21313206	21316659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21315488_21315991
tx.20141	chr9	+	1320	10	FSM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	-1	-3	-1	3	multi-exon	FALSE	canonical	3	687	junction_5	65.5845510263914	543	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2368	False	NA	NA	False	NA	NA	NA	21323131	21331573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
tx.20142	chr9	+	3501	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	2	224	junction_13	132.11218266634	256	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5868	False	NA	NA	False	NA	NA	NA	21336229	21418436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
tx.20143	chr9	-	1275	4	FSM	ENSMUSG00000032180.12	ENSMUST00000214576.2	1013	4	48	-310	1	0	multi-exon	FALSE	canonical	3	33	junction_2	250.551835399827	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCCTGGTGACTGGG	NA	False	NA	NA	False	NA	NA	NA	21421482	21418852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21419688_21420226_21420411_21420584_21420648_21421289
tx.20144	chr9	-	1319	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	59	0	-6	0	multi-exon	FALSE	canonical	3	533	junction_2	14.8548533034381	321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	NA	False	NA	NA	NA	21421489	21418850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
tx.20145	chr9	+	3614	14	FSM	ENSMUSG00000032185.16	ENSMUST00000154049.8	3585	14	-33	4	-4	-4	multi-exon	FALSE	canonical	3	1025	junction_5	70.328224573052	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCTGCAAAACAGCAG	NA	False	NA	NA	False	NA	NA	NA	21458185	21500759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803
tx.20146	chr9	+	3219	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	-4	5	-4	-5	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	2177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCCTGCAAAACAGCA	NA	False	NA	NA	False	NA	NA	NA	21458185	21500758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
tx.20147	chr9	-	1979	9	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	-12	1	intron_retention	FALSE	canonical	3	27	junction_8	22.544400635191	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCACGCCCATGGTGA	6112	False	NA	NA	False	NA	NA	NA	21504080	21499980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
tx.20148	chr9	-	1904	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	-6	-4	-6	4	multi-exon	FALSE	canonical	3	27	junction_9	21.338541031039	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCCATGGTGACCATGTG	6118	False	NA	NA	False	NA	NA	NA	21504074	21499973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
tx.20149	chr9	-	1962	10	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	4	6	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	17.7478915457862	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGGTGACCATGTGGC	6072	False	NA	NA	False	NA	NA	NA	21504120	21499971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
tx.2015	chr10	-	7470	31	FSM	ENSMUSG00000074785.6	ENSMUST00000099337.5	7302	31	-179	11	-179	-11	multi-exon	TRUE	canonical	0	0	junction_5	2.01218510303821	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAACAAATGTGGACTG	NA	False	NA	NA	False	NA	NA	NA	94780876	94626738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845_94634010_94635132_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032_94663180_94667204_94667404_94669149_94669275_94669509_94669549_94673363_94673468_94673779_94673882_94677326_94677430_94679584_94679771_94680043_94680248_94683376_94683477_94685683_94685864_94688450_94688591_94700578_94700675_94700792_94700896_94702772_94702861_94706836_94706982_94718379_94718495_94742326_94742428_94746397_94746533_94758491_94758633_94779378
tx.20150	chr9	-	2101	8	FSM	ENSMUSG00000032182.16	ENSMUST00000034700.15	2174	8	66	7	10	-3	multi-exon	FALSE	canonical	3	66	junction_3	11.8062591493682	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCATGTCACGCCCATG	6134	False	NA	NA	False	NA	NA	NA	21504058	21499984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
tx.20151	chr9	-	2026	9	ISM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	14	2	14	-2	intron_retention	FALSE	canonical	3	66	junction_4	11.9032558571174	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCACGCCCATGGTGAC	6138	False	NA	NA	False	NA	NA	NA	21504054	21499979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
tx.20152	chr9	-	1951	9	FSM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	40	23	2	-23	multi-exon	FALSE	canonical	3	41	junction_8	18.6463803457937	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATTAAAAAA	6126	False	NA	NA	False	NA	NA	NA	21504066	21500004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
tx.20153	chr9	+	2933	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	214	23	214	-23	multi-exon	FALSE	canonical	3	163	junction_1	0	287	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAGTCTTATTCACCC	4725	False	NA	NA	False	NA	NA	NA	21504231	21507243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21504367_21504445
tx.20154	chr9	+	5448	34	FSM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	56	850	-39	1	multi-exon	FALSE	canonical	3	423	junction_28	87.1904283674422	476	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1293	False	NA	NA	False	NA	NA	NA	21527520	21614663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
tx.20155	chr9	+	4497	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	130	0	14	0	multi-exon	FALSE	canonical	3	262	junction_7	34.4140270749526	693	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1903	False	NA	NA	False	NA	NA	NA	21634908	21661215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
tx.20156	chr9	-	1366	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	645	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671599	21666737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
tx.20157	chr9	-	1244	5	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-3	8	combination_of_known_junctions	FALSE	canonical	3	158	junction_4	926.927552454883	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGCAGCATGGTGG	NA	False	NA	NA	False	NA	NA	NA	21671602	21666729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671547
tx.20158	chr9	-	1280	4	FSM	ENSMUSG00000074476.7	ENSMUST00000216057.2	627	4	17	-670	-4	8	multi-exon	FALSE	canonical	3	69	junction_1	994.029174622154	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGCAGCATGGTGG	NA	False	NA	NA	False	NA	NA	NA	21671582	21666729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21667592_21668585_21668691_21668980_21669126_21671414
tx.20159	chr9	-	2189	4	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	5	8	intron_retention	FALSE	canonical	3	1938	junction_3	181.336397032942	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGCAGCATGGTGG	NA	False	NA	NA	False	NA	NA	NA	21671593	21666729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_21668490_21668585_21668691_21668980_21669126_21671414
tx.2016	chr10	-	1704	2	FSM	ENSMUSG00000045867.11	ENSMUST00000220279.2	1613	2	-84	-7	-84	7	multi-exon	FALSE	canonical	3	86	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTCCATTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	95158911	95010600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_95011841_95158447
tx.20160	chr9	-	4304	10	ISM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	3420	-1	3179	1	3prime_fragment	FALSE	canonical	3	374	junction_8	36.8312803181826	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTCGTGTCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	21706620	21678078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752
tx.20161	chr9	-	4782	11	ISM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	2547	-2	2306	2	3prime_fragment	FALSE	canonical	3	374	junction_8	35.3162851953599	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTCGTGTCTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	21707493	21678077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375
tx.20162	chr9	-	5010	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	30	0	30	0	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	738	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	21710010	21678079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
tx.20163	chr9	-	6449	48	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	48.733186790872	55	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6266	False	NA	NA	False	NA	NA	NA	21763921	21711475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
tx.20164	chr9	-	6434	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	49.6898757122857	46	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6269	False	NA	NA	False	NA	NA	NA	21763918	21711475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
tx.20165	chr9	-	6537	49	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	52.0987143955268	17	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6271	False	NA	NA	False	NA	NA	NA	21763916	21711475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
tx.20166	chr9	-	3045	22	ISM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	-2	5667	-2	-5667	5prime_fragment	FALSE	canonical	3	152	junction_8	19.8113552266968	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTATGTGTACATCTAC	6271	False	NA	NA	False	NA	NA	NA	21763916	21741208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
tx.20167	chr9	-	1888	15	FSM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	-17	-3	2	3	multi-exon	FALSE	canonical	3	13	junction_1	50.5494807094989	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCCTCTGTTCTCTTTT	6258	False	NA	NA	False	NA	NA	NA	21763929	21748641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21748848_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
tx.20168	chr9	-	3758	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	43	34	-10	-15	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTATAATAAAATAAAGGAAG	2276	False	NA	NA	False	NA	NA	NA	21829445	21818820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
tx.20169	chr9	-	3785	5	NNC	ENSMUSG00000019066.14	novel	3835	5	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	14.6692706021806	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGCATTGTATATTGC	2279	False	NA	NA	False	NA	NA	NA	21829442	21818793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827243_21829317
tx.2017	chr10	-	1676	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-35	-526	-35	7	multi-exon	FALSE	canonical	3	30	junction_2	28	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTCCATTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	95159462	95010600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_95011841_95158447_95158752_95159330
tx.20170	chr9	-	721	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	66	-2	66	1	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCATGGTCATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	21838692	21832302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
tx.20171	chr9	+	2629	10	NIC	ENSMUSG00000040563.14	novel	2626	10	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	8.37692303332034	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGGCCTTCTGCCTGC	79	False	NA	NA	False	NA	NA	NA	21848310	21860201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858349_21858676_21858729_21858899
tx.20172	chr9	+	1837	2	FSM	ENSMUSG00000051238.7	ENSMUST00000053583.7	1838	2	2	-1	2	1	multi-exon	FALSE	canonical	3	72	junction_1	0	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGACTCTGGTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	21867052	21869561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21867301_21867972
tx.20173	chr9	+	2024	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	-12	0	-12	0	multi-exon	FALSE	canonical	3	461	junction_11	125.012497645132	540	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	21914301	21925518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
tx.20174	chr9	+	2048	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	-62	-3	-14	1	multi-exon	TRUE	canonical	3	290	junction_11	154.653737577573	319	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTGTTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	21914299	21925519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
tx.20175	chr9	-	2182	9	FSM	ENSMUSG00000038895.17	ENSMUST00000179605.9	1888	9	-54	-240	-19	0	multi-exon	FALSE	canonical	3	19	junction_5	12.5299640861417	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9407	False	NA	NA	False	NA	NA	NA	21982691	21966755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968999_21969099_21969712_21976996_21977213_21979443_21979488_21982344
tx.20176	chr9	-	2162	9	FSM	ENSMUSG00000038895.17	ENSMUST00000043922.7	2108	9	-54	0	-23	0	multi-exon	FALSE	canonical	3	20	junction_5	12.3129758791285	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9403	False	NA	NA	False	NA	NA	NA	21982695	21966755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968975_21969099_21969712_21976996_21977213_21979443_21979488_21982344
tx.20177	chr9	-	1665	9	FSM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	11	0	0	0	multi-exon	TRUE	canonical	3	90	junction_8	49.2772767104677	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5896	False	NA	NA	False	NA	NA	NA	21996723	21983541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
tx.20178	chr9	-	1677	9	FSM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	-4	0	-4	0	multi-exon	FALSE	canonical	3	105	junction_8	44.5222907654132	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5892	False	NA	NA	False	NA	NA	NA	21996727	21983541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996644
tx.20179	chr9	+	192	2	Intergenic	novelGene_370	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAATCAAAGGAAACCTG	NA	False	NA	NA	False	NA	NA	NA	21987027	22178606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_+_21987175_22178561
tx.2018	chr10	-	1651	3	NIC	ENSMUSG00000045867.11	novel	1661	3	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	2	18	junction_2	34	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTCCATTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	95159969	95010600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_95011841_95158447_95158752_95159862
tx.20180	chr9	-	883	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	5	0	5	0	multi-exon	FALSE	canonical	3	357	junction_2	52.5	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCCGCTGTACTTCTT	7949	False	NA	NA	False	NA	NA	NA	22028463	22024286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_22024976_22025103_22025240_22028405
tx.20181	chr9	-	4011	2	FSM	ENSMUSG00000013822.8	ENSMUST00000166335.2	1053	2	-2960	2	-6	0	multi-exon	FALSE	canonical	3	462	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCCGCTGTACTTCTT	7987	False	NA	NA	False	NA	NA	NA	22028425	22024286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_22024976_22025103
tx.20182	chr9	-	1295	3	FSM	ENSMUSG00000013822.8	ENSMUST00000213233.2	810	3	-38	-447	-1	0	multi-exon	FALSE	canonical	1	3	junction_2	229.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCCGCTGTACTTCTT	7992	False	NA	NA	False	NA	NA	NA	22028420	22024286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_22024976_22025103_22025240_22027950
tx.20183	chr9	-	2061	5	FSM	ENSMUSG00000001348.16	ENSMUST00000115315.3	1349	5	-710	-2	345	2	multi-exon	TRUE	canonical	3	21	junction_4	98.7734149455206	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTGTGTCATCAAGGT	9419	False	NA	NA	False	NA	NA	NA	22042604	22038024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818
tx.20184	chr9	-	1340	5	NNC	ENSMUSG00000001348.16	novel	1356	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	83.7048385698222	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	9075	False	NA	NA	False	NA	NA	NA	22042948	22038022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042885
tx.20185	chr9	-	1406	5	FSM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	-52	2	-36	2	multi-exon	FALSE	canonical	3	129	junction_4	52.4374627532645	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTGTGTCATCAAGGT	8860	False	NA	NA	False	NA	NA	NA	22043163	22038024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032
tx.20186	chr9	+	675	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	1	19	1	14	multi-exon	FALSE	canonical	3	566	junction_1	0	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCTTCATCCAAAGACT	NA	False	NA	NA	False	NA	NA	NA	22068142	22069635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_22068210_22069027
tx.20187	chr9	+	737	2	FSM	ENSMUSG00000010607.9	ENSMUST00000148088.2	676	2	-37	-24	-37	-9	multi-exon	FALSE	canonical	3	126	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGACTGTTTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	22068204	22069645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_22068324_22069027
tx.20188	chr9	+	2510	5	NNC	ENSMUSG00000074472.11	novel	2958	4	NA	NA	30	-244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.38484800354236	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAAAGTTTTTTTCTAGTG	136	False	NA	NA	False	NA	NA	NA	22099415	22113175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_22099528_22108362_22108490_22108670_22108732_22110713_22111798_22112049
tx.20189	chr9	+	5265	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-44	-3908	-6	-3	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTGCCTTGGTTGTGTT	734	False	NA	NA	False	NA	NA	NA	22137003	22154647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
tx.2019	chr10	-	1688	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	-25	-2	0	2	multi-exon	FALSE	canonical	3	29	junction_2	28.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTGCGTGTCCATTGT	NA	False	NA	NA	False	NA	NA	NA	95159995	95010605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_95011841_95158447_95158752_95159846
tx.20190	chr9	+	5437	5	FSM	ENSMUSG00000057982.9	ENSMUST00000213371.2	1766	5	-14	-3657	-5	-4	multi-exon	FALSE	canonical	3	33	junction_2	49.3273504254992	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGTTGCCTTGGTTGTGT	735	False	NA	NA	False	NA	NA	NA	22137004	22154646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_22137129_22146315_22146443_22147323_22147591_22148970_22149081_22149837
tx.20191	chr9	-	3613	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	-39	0	-39	0	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTAGTCTGAGATGTAG	NA	False	NA	NA	False	NA	NA	NA	22171230	22158725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
tx.20192	chr9	-	3295	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	-51	-6	-41	6	multi-exon	FALSE	canonical	3	16	junction_6	8.19407451411428	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTAAGCATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	22218985	22188037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
tx.20193	chr9	-	4582	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	23	0	23	0	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	749	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7206	False	NA	NA	False	NA	NA	NA	22300461	22243307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
tx.20194	chr9	-	4645	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7197	False	NA	NA	False	NA	NA	NA	22300470	22243307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
tx.20195	chr9	-	1143	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	-9	0	1	0	multi-exon	FALSE	canonical	3	365	junction_2	10.1311401135312	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTCATTATTAATACAG	9501	False	NA	NA	False	NA	NA	NA	22379653	22359606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
tx.20196	chr9	+	3521	22	FSM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	-20	-6	-4	0	multi-exon	FALSE	canonical	3	19	junction_1	15.2048745018425	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	NA	False	NA	NA	NA	22387006	22799576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
tx.20197	chr9	+	3561	23	NIC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-4	0	intron_retention	FALSE	canonical	3	12	junction_1	19.496609156339	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	NA	False	NA	NA	NA	22387022	22799576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_22387487_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
tx.20198	chr9	+	3421	23	FSM	ENSMUSG00000035919.17	ENSMUST00000150395.8	3425	23	10	-6	1	0	multi-exon	FALSE	canonical	3	14	junction_1	19.2294217582595	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	NA	False	NA	NA	NA	22387027	22799576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
tx.20199	chr9	+	3375	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	7	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	13.43515542748	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	NA	False	NA	NA	NA	22387017	22799576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
tx.202	chr1	-	4334	23	FSM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	-74	2	65	-2	multi-exon	FALSE	canonical	3	101	junction_15	29.8629099122934	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	38168817	38091868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
tx.2020	chr10	-	5324	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	2	1457	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGCTGCCGTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	95252717	95219766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
tx.20200	chr9	-	4824	22	FSM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	-84	-25	-84	0	multi-exon	TRUE	canonical	3	255	junction_7	22.7832137753209	568	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	24414520	24323073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
tx.20201	chr9	-	3584	23	FSM	ENSMUSG00000043067.16	ENSMUST00000142064.8	3489	23	-95	0	-95	0	multi-exon	FALSE	canonical	3	87	junction_1	49.1071732317176	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	24414531	24323073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
tx.20202	chr9	-	2723	8	NNC	ENSMUSG00000008429.9	novel	2781	8	NA	NA	33	4	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	36.7145636454183	29	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTATGGGATATTTAT	NA	False	NA	NA	False	NA	NA	NA	25063083	25019423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_25020302_25020735_25020851_25021735_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
tx.20203	chr9	-	2754	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	31	-4	31	4	multi-exon	FALSE	canonical	3	81	junction_2	20.4550278236258	229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTATGGGATATTTAT	NA	False	NA	NA	False	NA	NA	NA	25063085	25019423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
tx.20204	chr9	+	2450	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	62	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	1420	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCAGTGTCTTGTATA	NA	False	NA	NA	False	NA	NA	NA	25163808	25219863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
tx.20205	chr9	+	2730	8	FSM	ENSMUSG00000036611.6	ENSMUST00000040677.6	2723	8	-8	1	-8	-1	multi-exon	FALSE	canonical	3	10	junction_4	5.11101251999952	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGAGTGTGGAATGGTT	NA	False	NA	NA	False	NA	NA	NA	25392834	25515405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_25393193_25393576_25394616_25458847_25458900_25493187_25493299_25497957_25498093_25500730_25500870_25505856_25506052_25514704
tx.20206	chr9	-	3676	19	FSM	ENSMUSG00000036395.16	ENSMUST00000066560.13	3688	19	13	-1	13	0	multi-exon	FALSE	canonical	3	9	junction_2	5.66884489725515	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTTGTGTCTGGGGA	NA	False	NA	NA	False	NA	NA	NA	26717751	26674339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_26676120_26676397_26676515_26676875_26676988_26677280_26677369_26678372_26678452_26678690_26678763_26679015_26679157_26679714_26679822_26680331_26680413_26681035_26681174_26682323_26682409_26685268_26685340_26689314_26689397_26691969_26692063_26703077_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26717593
tx.20207	chr9	-	2988	11	NNC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	90.3518123780591	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAATTTATTTTCATG	9241	False	NA	NA	False	NA	NA	NA	26910852	26885441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_26887057_26888851_26889051_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
tx.20208	chr9	-	2105	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	11	743	11	489	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTCTAAGTATTAGGT	9259	False	NA	NA	False	NA	NA	NA	26910834	26886182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
tx.20209	chr9	-	2857	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	16	-14	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATCATTTTGAAAAAA	9264	False	NA	NA	False	NA	NA	NA	26910829	26885453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
tx.2021	chr10	-	2207	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	1	14	1	-14	multi-exon	FALSE	canonical	3	447	junction_2	23.5	503	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGCACTCATTACTTT	NA	False	NA	NA	False	NA	NA	NA	95252718	95247365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_95248973_95250692_95251054_95252479
tx.20210	chr9	+	941	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	-23	0	-11	0	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAAGTGTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	26910994	26918630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
tx.20211	chr9	+	809	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	-30	-4	-30	0	multi-exon	FALSE	canonical	3	323	junction_6	112.305634567263	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAAGTGTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	26910975	26918630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
tx.20212	chr9	-	3613	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-36	-2	-36	2	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	233	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGGTCTTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	26941397	26919064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
tx.20213	chr9	+	5071	35	FSM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	81	-3	81	0	multi-exon	FALSE	canonical	3	212	junction_3	21.5907395566265	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	NA	NA	NA	26942025	27006611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
tx.20214	chr9	+	4900	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_23	42.7501391163078	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	NA	NA	NA	26942025	27006611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983089_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
tx.20215	chr9	+	6733	35	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_24	41.1214338069467	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	NA	NA	NA	26942025	27006611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
tx.20216	chr9	-	1945	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5161	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27032685	27008679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
tx.20217	chr9	-	2013	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4324	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27033522	27008679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
tx.20218	chr9	-	1953	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27066700	27008679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
tx.20219	chr9	+	3494	9	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-65	-13283	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	12.8549601321824	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTACTGATGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	30338338	30362686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30362305
tx.2022	chr10	-	3828	2	FSM	ENSMUSG00000020027.19	ENSMUST00000119917.2	948	2	-1769	-1111	128	-15	multi-exon	FALSE	canonical	3	494	junction_1	0	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGCACTCATTACTT	NA	False	NA	NA	False	NA	NA	NA	95252914	95247366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_95248973_95250692
tx.20220	chr9	+	4846	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	-68	984	-68	-984	multi-exon	TRUE	canonical	3	26	junction_9	7.52927619363243	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTGAAATTGTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	30338335	30377038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
tx.20221	chr9	+	4662	10	NIC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-69	-984	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	12.7898493702459	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTGAAATTGTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	30338334	30377038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30374515_30374604_30375581
tx.20222	chr9	-	6057	8	FSM	ENSMUSG00000033453.9	ENSMUST00000065112.7	5928	8	-128	-1	-128	1	multi-exon	FALSE	canonical	1	3	junction_2	0.989743318610787	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGTCTGTCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	30833876	30810449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_30814086_30815776_30815953_30816055_30816238_30817356_30817535_30821893_30822178_30822405_30822574_30822976_30823110_30832576
tx.20223	chr9	+	3648	9	FSM	ENSMUSG00000031994.14	ENSMUST00000068135.13	3631	9	-17	0	-17	0	multi-exon	TRUE	canonical	3	22	junction_2	5.53257399408268	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGTCTAGTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	30853840	30874152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_30854898_30862561_30862802_30863890_30864027_30864651_30864820_30865762_30866068_30867791_30867976_30870209_30870383_30870497_30870674_30872943
tx.20224	chr9	+	3385	6	FSM	ENSMUSG00000047412.17	ENSMUST00000216649.2	3157	6	-245	17	-245	-17	multi-exon	FALSE	canonical	3	75	junction_3	111.276951791465	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGAAGCCACGAGTA	NA	False	NA	NA	False	NA	NA	NA	30941694	30981512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978039_30980040
tx.20225	chr9	+	3445	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-245	5661	-243	-9	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	438	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCACGAGTAATGAACTT	NA	False	NA	NA	False	NA	NA	NA	30941696	30981520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
tx.20226	chr9	+	3388	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-243	-15	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	121.155107197344	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGAAGCCACGAGTAAT	NA	False	NA	NA	False	NA	NA	NA	30941696	30981514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975525_30975639_30977954_30978039_30980040
tx.20227	chr9	+	3666	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-243	-5	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTAATGAACTTTTGT	NA	False	NA	NA	False	NA	NA	NA	30941696	30981524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
tx.20228	chr9	-	3229	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	25	5	25	-5	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	862	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	31043124	31000702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
tx.20229	chr9	-	3658	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	-24	0	0	0	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	1122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8715	False	NA	NA	False	NA	NA	NA	31123111	31060852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
tx.2023	chr10	-	661	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	3	-3	2	0	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	651	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	NA	False	NA	NA	NA	95337799	95316666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
tx.20230	chr9	-	3494	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-32	0	-4	0	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	697	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8711	False	NA	NA	False	NA	NA	NA	31123115	31060852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
tx.20231	chr9	+	4746	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_21	8.75776299624583	13	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTTCTTGTGCA	NA	False	NA	NA	False	NA	NA	NA	31191844	31293024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755
tx.20232	chr9	+	5155	26	FSM	ENSMUSG00000042185.15	ENSMUST00000086167.12	5161	26	6	0	1	0	multi-exon	FALSE	canonical	3	28	junction_5	11.7439346047226	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	NA	False	NA	NA	NA	31297493	31332629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
tx.20233	chr9	+	5191	26	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	9.17387595294377	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	NA	False	NA	NA	NA	31297493	31332629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
tx.20234	chr9	+	5429	26	FSM	ENSMUSG00000042185.15	ENSMUST00000132329.8	5398	26	-31	0	-26	0	multi-exon	FALSE	canonical	2	9	junction_5	14.7460638815923	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	NA	False	NA	NA	NA	31297461	31332629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308089_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
tx.20235	chr9	+	6670	22	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-83763	86	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_1	7.18653313520513	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCATTACCGCCTTATC	NA	False	NA	NA	False	NA	NA	NA	31943668	32172600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_31944029_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32167355_32168008_32168995_32170197
tx.20236	chr9	-	3071	2	Antisense	novelGene_ENSMUSG00000041444.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGAATTGTGTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	32047600	32044431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_-_32046898_32046995
tx.20237	chr9	+	5112	8	FSM	ENSMUSG00000032035.17	ENSMUST00000034534.13	5080	8	-34	2	-34	-2	multi-exon	FALSE	canonical	1	1	junction_6	2.24971653543195	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGGTGGCTCTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	32607283	32669114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_32607762_32639970_32640091_32641350_32641552_32644244_32644323_32645235_32645485_32649394_32649656_32664094_32664214_32665508
tx.20238	chr9	-	1563	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_5	6.15142259969188	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGCTGTCTCATCAGAGA	NA	False	NA	NA	False	NA	NA	NA	34901172	34889331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34901035
tx.20239	chr9	-	2084	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	11	0	11	0	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	188	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	35028158	34957871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
tx.2024	chr10	+	1234	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	-15	2648	-15	3	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	814	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTGTACAGTTTATT	NA	False	NA	NA	False	NA	NA	NA	95350991	95378871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
tx.20240	chr9	-	1211	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	62	1	-6	-1	multi-exon	FALSE	canonical	3	621	junction_4	33.1083071146804	403	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGGTGTAGCCCAGTA	NA	False	NA	NA	False	NA	NA	NA	35087295	35035704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
tx.20241	chr9	-	4526	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	46	-2789	4	-4	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGTTGTTTCATCTT	7981	False	NA	NA	False	NA	NA	NA	35111220	35095850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
tx.20242	chr9	-	2204	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	85	0	0	0	multi-exon	TRUE	canonical	3	179	junction_9	18.9747200242849	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122266	35115503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
tx.20243	chr9	-	2177	11	NNC	ENSMUSG00000039048.16	novel	2289	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	55.0422564944425	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122267	35115503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_35116420_35116600_35116706_35116884_35116987_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
tx.20244	chr9	+	2967	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	22	4	22	-4	multi-exon	TRUE	canonical	3	518	junction_4	138.528744373691	1594	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5534	False	NA	NA	False	NA	NA	NA	35122472	35128306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
tx.20245	chr9	-	1391	7	FSM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	2	269	-1	1	multi-exon	FALSE	canonical	3	54	junction_4	50.0954644209988	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGGCTCTACTTTGA	6391	False	NA	NA	False	NA	NA	NA	35179074	35128529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
tx.20246	chr9	-	1622	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	27	211	-1	4	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCTCTACTTTGAAGA	6391	False	NA	NA	False	NA	NA	NA	35179074	35128526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
tx.20247	chr9	+	1811	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	8	2	8	-2	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTAATTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	35179168	35187259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
tx.20248	chr9	-	1703	12	FSM	ENSMUSG00000032101.7	ENSMUST00000034612.7	6934	12	30	5201	30	-5201	multi-exon	FALSE	canonical	3	22	junction_11	3.32533475603125	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGAGGGCTCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	35469794	35453143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_35453356_35454893_35455083_35457109_35457273_35458076_35458315_35462580_35462759_35464132_35464248_35465602_35465706_35465812_35465906_35468061_35468198_35468677_35468726_35468980_35469048_35469633
tx.20249	chr9	+	1753	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	8	258	2	5	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTCTTTTTCAAGGC	NA	False	NA	NA	False	NA	NA	NA	35470763	35478439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
tx.2025	chr10	-	3242	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	-34	2	-34	-2	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	796	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATGTTTATTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	95400042	95382870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
tx.20250	chr9	-	1677	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	296	0	-5	0	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAACCTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	35481398	35472115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
tx.20251	chr9	+	1705	3	ISM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	5322	258	5316	5	3prime_fragment	FALSE	canonical	3	88	junction_2	5.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTCTTTTTCAAGGC	NA	False	NA	NA	False	NA	NA	NA	35476077	35478439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_35476494_35476585_35477152_35477716
tx.20252	chr9	+	3523	2	ISM	ENSMUSG00000032103.11	ENSMUST00000135768.2	2144	4	6187	-1731	5316	1468	3prime_fragment	FALSE	canonical	3	88	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAATTACTTCAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	35476077	35480165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_35477152_35477716
tx.20253	chr9	+	3714	8	ISM	ENSMUSG00000074452.14	ENSMUST00000098906.9	1690	11	-19	16795	-19	634	5prime_fragment	FALSE	canonical	0	0	junction_4	5.15078753637713	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGACTATTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	35481560	35584819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_35481827_35485525_35485684_35518890_35519016_35523067_35523168_35580718_35581031_35581174_35581199_35581774_35581907_35582222
tx.20254	chr9	-	2399	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	43	955	-30	3	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	438	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTCCTGTATTCCTTT	691	False	NA	NA	False	NA	NA	NA	36637911	36620732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
tx.20255	chr9	-	2743	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	56	3068	-4	14	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	2729	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGTGCTGTTTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	36678919	36643707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
tx.20256	chr9	-	2140	11	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	8	4	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_10	160.762060200782	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	NA	False	NA	NA	NA	36708649	36690450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708552
tx.20257	chr9	-	2187	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	37	-4	5	4	multi-exon	FALSE	canonical	3	488	junction_2	34.4551882885582	561	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	NA	False	NA	NA	NA	36708652	36690450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
tx.20258	chr9	-	2398	11	FSM	ENSMUSG00000062762.18	ENSMUST00000163192.11	2309	11	-85	-4	3	4	multi-exon	FALSE	canonical	3	35	junction_10	155.462664328127	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	NA	False	NA	NA	NA	36708654	36690450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708299
tx.20259	chr9	+	1724	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	68	2	-12	2	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCATGGTTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	36744047	36790218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
tx.2026	chr10	+	2557	4	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	-1080	619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.0987873536054	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAACTCAGAATATCATT	NA	False	NA	NA	False	NA	NA	NA	95728224	95733738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_95729296_95729415_95729523_95729937_95730152_95732573
tx.20260	chr9	-	3539	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	93	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATGCACAGTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	37058610	36802277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
tx.20261	chr9	-	2907	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	307	2729	-17	2	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTGGTTCTCACTTT	NA	False	NA	NA	False	NA	NA	NA	37166727	37141609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
tx.20262	chr9	+	2350	4	FSM	ENSMUSG00000042138.10	ENSMUST00000048604.8	2291	4	-24	-35	-22	35	multi-exon	FALSE	canonical	3	35	junction_1	92.182186758373	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	373	False	NA	NA	False	NA	NA	NA	37400592	37435481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
tx.20263	chr9	+	2285	5	NIC	ENSMUSG00000042138.10	novel	423	4	NA	NA	-22	36	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	97.7010747126151	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	373	False	NA	NA	False	NA	NA	NA	37400592	37435482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_37401130_37424909_37425000_37428668_37428769_37430022_37430084_37433985
tx.20264	chr9	+	2192	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	-301	-1468	-20	35	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	375	False	NA	NA	False	NA	NA	NA	37400594	37435481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
tx.20265	chr9	+	5951	4	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-20	35	intron_retention	FALSE	canonical	3	44	junction_1	87.9406365428154	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	375	False	NA	NA	False	NA	NA	NA	37400594	37435481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_37401130_37424909_37428769_37430022_37430084_37433985
tx.20266	chr9	+	6061	5	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-15	36	intron_retention	FALSE	canonical	3	20	junction_1	105.264844558855	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	380	False	NA	NA	False	NA	NA	NA	37400599	37435482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_37401130_37402751_37402866_37424909_37428769_37430022_37430084_37433985
tx.20267	chr9	+	4249	3	FSM	ENSMUSG00000042138.10	ENSMUST00000213411.2	742	3	-2328	-1179	-2328	35	multi-exon	FALSE	canonical	3	228	junction_2	2.5	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	NA	False	NA	NA	False	NA	NA	NA	37426076	37435481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_37428769_37430022_37430084_37433985
tx.20268	chr9	-	686	5	FSM	ENSMUSG00000001948.11	ENSMUST00000002013.11	696	5	2	8	2	-8	multi-exon	TRUE	canonical	2	6	junction_2	1.92028643696715	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCAGTGTTGTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	37525016	37514593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_37514783_37517088_37517167_37518912_37518984_37523131_37523315_37524851
tx.20269	chr9	+	4199	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	147	601	-10	-601	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGCTTATTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	37525112	37560350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
tx.2027	chr10	+	1521	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	44	618	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	59	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAACTCAGAATATCAT	NA	False	NA	NA	False	NA	NA	NA	95729348	95733737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_95729523_95729968_95730152_95732573
tx.20270	chr9	-	1488	9	FSM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	72	424	-3	-5	multi-exon	FALSE	canonical	3	1493	junction_6	94.6836839165017	1359	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTTATTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	37568536	37560482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
tx.20271	chr9	+	3861	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	28	268	24	-268	multi-exon	TRUE	canonical	2	10	junction_6	2.97449918967259	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTAAAAGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	38629591	38654365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
tx.20272	chr9	-	5226	20	NNC	ENSMUSG00000040111.18	novel	7488	20	NA	NA	-12659	-1918	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_19	5.57795423136496	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTAGGTTTGACCTTGA	7456	False	NA	NA	False	NA	NA	NA	40325824	40206458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40324592_40324671_40325685
tx.20273	chr9	+	3845	4	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	86415	-465	-1667	465	3prime_fragment	FALSE	canonical	3	9	junction_1	0.816496580927726	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATGAAATCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	40683722	40697080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_40683825_40685658_40685782_40692408_40692551_40693602
tx.20274	chr9	+	2132	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	261	1	-31	0	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	538	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2428	False	NA	NA	False	NA	NA	NA	40712540	40716495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
tx.20275	chr9	+	2246	8	ISM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	717	0	240	0	3prime_fragment	FALSE	canonical	3	3928	junction_2	6440.2006179932	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2884	False	NA	NA	False	NA	NA	NA	40712996	40716496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
tx.20276	chr9	-	3526	14	FSM	ENSMUSG00000032020.16	ENSMUST00000044155.15	6354	14	294	2534	-266	1089	multi-exon	FALSE	canonical	0	0	junction_12	2.76067052998867	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCCATATCCATGTCGAT	6656	False	NA	NA	False	NA	NA	NA	41069064	40924927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962612_40962667_41068594
tx.20277	chr9	-	4277	29	ISM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	92450	3523	-46013	1496	3prime_fragment	FALSE	canonical	3	333	junction_27	84.6262114434134	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	NA	False	NA	NA	False	NA	NA	NA	41943143	41879538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964
tx.20278	chr9	-	5667	35	ISM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	80204	3000	-58259	2019	3prime_fragment	TRUE	canonical	3	333	junction_27	81.3832670711219	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGTCTCCATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	41955389	41879015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202
tx.20279	chr9	-	7217	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-25	3523	-25	1496	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	498	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	NA	False	NA	NA	False	NA	NA	NA	42035618	41879538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
tx.2028	chr10	+	7801	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-54	2	5	-2	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAATGACTATGATTGG	2725	False	NA	NA	False	NA	NA	NA	95776557	95881378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
tx.20280	chr9	-	3902	27	ISM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	99882	3526	-38581	1493	3prime_fragment	FALSE	canonical	3	361	junction_18	83.6633858397896	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGACGGAGTGCATTCT	NA	False	NA	NA	False	NA	NA	NA	41935711	41879541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591
tx.20281	chr9	-	4709	5	FSM	ENSMUSG00000032018.15	ENSMUST00000217513.2	703	5	-1	-4005	0	3	multi-exon	TRUE	canonical	2	2	junction_4	78.337411241373	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGTGGACCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	42175552	42162887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42175501
tx.20282	chr9	-	4806	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	-21	2	-21	-2	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCATTGTGTGGACCT	NA	False	NA	NA	False	NA	NA	NA	42175573	42162892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
tx.20283	chr9	-	2196	5	ISM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	2067	-596	2067	596	3prime_fragment	FALSE	canonical	3	176	junction_1	24.7323169153236	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCCACTTAAATGTTATA	NA	False	NA	NA	False	NA	NA	NA	42173429	42165432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346
tx.20284	chr9	-	4825	6	FSM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	-12	-3136	-12	-2	multi-exon	FALSE	canonical	3	15	junction_5	75.9910521048367	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCATTGTGTGGACCT	NA	False	NA	NA	False	NA	NA	NA	42175508	42162892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175417
tx.20285	chr9	-	4792	7	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	15.8788818526019	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTGTTCTGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	42383528	42323611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42361219_42361360_42362908_42363059_42383361
tx.20286	chr9	-	5009	8	FSM	ENSMUSG00000037287.16	ENSMUST00000066148.12	5000	8	-9	0	-2	0	multi-exon	FALSE	canonical	3	34	junction_7	5.55124549363584	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTGTTCTGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	42383563	42323611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42383361
tx.20287	chr9	-	400	2	Intergenic	novelGene_373	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAGTAAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42600839	42600342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_-_42600590_42600686
tx.20288	chr9	-	6258	40	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-68	-4504	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	6.17666708711603	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTTATTCTTGGTA	NA	False	NA	NA	False	NA	NA	NA	43017350	42879642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
tx.20289	chr9	-	5753	40	NIC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	-24	-4962	combination_of_known_junctions	FALSE	canonical	2	9	junction_32	5.59632639907851	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43017306	42880100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
tx.2029	chr10	+	6325	19	ISM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	70221	114	70214	-114	3prime_fragment	FALSE	canonical	3	33	junction_5	7.2995856469586	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCATTTAAATCTGTAT	NA	False	NA	NA	False	NA	NA	NA	95846832	95881266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
tx.20290	chr9	-	3376	5	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-144	330	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	5.11737237261468	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATGTATTAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	43017426	42935311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
tx.20291	chr9	-	3481	3	FSM	ENSMUSG00000048503.8	ENSMUST00000061833.6	3503	3	20	2	-6	-2	multi-exon	FALSE	canonical	3	19	junction_1	3	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGCCTTCGTATCTTT	NA	False	NA	NA	False	NA	NA	NA	43027845	43019946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_43023154_43024755_43024956_43027771
tx.20292	chr9	-	2657	13	FSM	ENSMUSG00000032015.17	ENSMUST00000176636.5	2522	13	-133	-2	-133	2	multi-exon	FALSE	canonical	3	54	junction_12	13.5359603361646	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTCAGAGGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	43117185	43035231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116950
tx.20293	chr9	-	2799	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5490	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	21.2895057611856	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTCAGAGGAGTGTT	5111	False	NA	NA	False	NA	NA	NA	43111562	43035231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43111185
tx.20294	chr9	-	1816	4	NIC	ENSMUSG00000032014.7	novel	2526	4	NA	NA	65	566	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	17.2111075245674	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCGCCAGCTTAGGCT	NA	False	NA	NA	False	NA	NA	NA	43151143	43133197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_43134137_43135172_43135375_43136172_43136308_43150603
tx.20295	chr9	-	1877	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	-18	667	-18	565	multi-exon	FALSE	canonical	3	37	junction_2	2.62466929133727	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGGCGCCAGCTTAGGC	NA	False	NA	NA	False	NA	NA	NA	43151226	43133198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
tx.20296	chr9	+	5894	6	FSM	ENSMUSG00000032012.10	ENSMUST00000034510.9	5653	6	-244	3	-244	-3	multi-exon	FALSE	canonical	3	13	junction_5	3.03315017762062	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCCAAGTGCCTCTTGT	NA	False	NA	NA	False	NA	NA	NA	43655036	43718755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_43656020_43702333_43702685_43703173_43703477_43703744_43703863_43705386_43705539_43714768
tx.20297	chr9	+	3843	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	22	2	22	-2	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGTGTGACGGTCTTG	NA	False	NA	NA	False	NA	NA	NA	43978339	44006922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
tx.20298	chr9	+	3223	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	-18	-1148	-18	-2	multi-exon	FALSE	canonical	3	22	junction_1	11.7473401244707	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGTGTGACGGTCTTG	2230	False	NA	NA	False	NA	NA	NA	43996217	44006922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
tx.20299	chr9	+	2904	16	FSM	ENSMUSG00000032135.16	ENSMUST00000034650.15	2989	16	82	3	-14	0	multi-exon	FALSE	canonical	3	21	junction_3	5.20085463062456	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGATGCTGTGTTCCATT	160	False	NA	NA	False	NA	NA	NA	44045940	44054021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
tx.203	chr1	-	4264	23	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	3	48	junction_15	37.6965099114511	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	38168752	38091870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
tx.2030	chr10	+	1816	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	3	3182	3	959	multi-exon	FALSE	canonical	3	461	junction_1	0	554	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCTCTTGTCATGATTA	NA	False	NA	NA	False	NA	NA	NA	96452870	96455489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_96453335_96454137
tx.20300	chr9	-	3157	16	FSM	ENSMUSG00000034342.10	ENSMUST00000206720.2	11372	16	62	8153	2	294	multi-exon	FALSE	canonical	1	3	junction_5	3.59382185918495	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGACTTAAGGCTTTCC	2976	False	NA	NA	False	NA	NA	NA	44145284	44062425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
tx.20301	chr9	-	5330	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	3	0	3	0	multi-exon	FALSE	canonical	3	40	junction_7	6.83852557930183	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGTGTGGTGGTGCC	NA	False	NA	NA	False	NA	NA	NA	44216965	44203736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
tx.20302	chr9	-	5473	11	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	19.8859246704799	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTGTGGTGGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	44216941	44203734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216078_44216244_44216912
tx.20303	chr9	-	5786	10	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_9	14.5296631451356	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGTGGTGGTGCCT	NA	False	NA	NA	False	NA	NA	NA	44216939	44203735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216431
tx.20304	chr9	-	5268	9	ISM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	3082	11	3056	-11	3prime_fragment	FALSE	canonical	3	40	junction_7	6.44204936336256	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTCAGACTTGAGT	NA	False	NA	NA	False	NA	NA	NA	44213886	44203747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706
tx.20305	chr9	-	3359	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	1	977	1	-3	multi-exon	FALSE	canonical	3	36	junction_2	6.29548537403388	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGGAGTGGCTGGTTAT	5316	False	NA	NA	False	NA	NA	NA	44231581	44221510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
tx.20306	chr9	+	4272	8	Fusion	ENSMUSG00000032123.6_ENSMUSG00000049932.4	novel	2050	8	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_1	98.4282604183351	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTTAATGTTGAATGCT	3747	False	NA	NA	False	NA	NA	NA	44238114	44247374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr9_+_44238503_44239265_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
tx.20307	chr9	+	1912	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	-2	295	-2	-289	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTAGCATCCCCTCCCTC	3772	False	NA	NA	False	NA	NA	NA	44238139	44244902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
tx.20308	chr9	+	1565	8	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	692	294	-446	-288	3prime_fragment	FALSE	canonical	3	234	junction_1	26.2880433750745	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGCATCCCCTCCCTCT	4466	False	NA	NA	False	NA	NA	NA	44238833	44244903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
tx.20309	chr9	-	1556	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	40	9	40	4	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	701	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTCTGAGACCTTTCTG	1448	False	NA	NA	False	NA	NA	NA	44255485	44247644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
tx.2031	chr10	+	7047	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	245	-6	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	445	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATGGGGACTGAACTT	NA	False	NA	NA	False	NA	NA	NA	98750512	98861999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
tx.20310	chr9	+	4371	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	54	7	-2	-1	multi-exon	TRUE	canonical	3	476	junction_1	89.8853847964173	1171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	44290840	44303659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
tx.20311	chr9	+	2131	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	1	-4	1	-2	multi-exon	FALSE	canonical	1	5	junction_1	8.7740740252177	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGGCTCATCCT	NA	False	NA	NA	False	NA	NA	NA	44308149	44314261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
tx.20312	chr9	+	2386	9	NIC	ENSMUSG00000032114.10	novel	2344	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.7740740252177	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGGCTCATCCTTT	NA	False	NA	NA	False	NA	NA	NA	44308378	44314263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_44308771_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
tx.20313	chr9	-	845	4	FSM	ENSMUSG00000032112.11	ENSMUST00000213747.2	935	4	30	60	30	1	multi-exon	FALSE	canonical	3	851	junction_3	13.0213499897497	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCTCCTAACTGATC	1997	False	NA	NA	False	NA	NA	NA	44318373	44315054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100
tx.20314	chr9	-	979	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	240	1	2	-1	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCTCTCCTAACTGA	1713	False	NA	NA	False	NA	NA	NA	44318657	44315056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
tx.20315	chr9	+	520	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	525	235	4	0	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	1440	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGGTGCATCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	44318960	44321489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
tx.20316	chr9	-	3441	8	NIC	ENSMUSG00000043923.9	novel	1080	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	36	junction_3	10.6732547682016	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGATTGAACCTGTAAAAC	8943	False	NA	NA	False	NA	NA	NA	44329333	44321453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_44321662_44321744_44321878_44321987_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
tx.20317	chr9	-	761	3	ISM	ENSMUSG00000074397.6	ENSMUST00000215980.2	676	4	-103	224	18	-224	5prime_fragment	FALSE	canonical	3	31	junction_1	2.5	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACCTGGACCCTGGGGC	9232	False	NA	NA	False	NA	NA	NA	44352415	44347075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_44347400_44347500_44347576_44352053
tx.20318	chr9	+	7358	10	NIC	ENSMUSG00000063382.7	novel	5760	8	NA	NA	-75	-110	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	7.10416327250924	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGACATCTTCCTGTTTT	1843	False	NA	NA	False	NA	NA	NA	44394046	44423083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_44394784_44400951_44401009_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
tx.20319	chr9	+	4965	3	ISM	ENSMUSG00000063382.7	ENSMUST00000074989.7	5339	9	7258	-1478	7122	5	3prime_fragment	FALSE	canonical	3	13	junction_2	5.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCTCTTGCATTTTTA	9960	False	NA	NA	False	NA	NA	NA	44417690	44423198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_44419168_44419449_44419732_44419992
tx.2032	chr10	+	7179	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	-55	6	-55	-6	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATGGGGACTGAACTT	NA	False	NA	NA	False	NA	NA	NA	98750958	98861999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
tx.20320	chr9	+	2838	14	FSM	ENSMUSG00000032097.11	ENSMUST00000217034.2	6029	14	-35	3226	-31	-3226	multi-exon	FALSE	canonical	3	13	junction_1	7.66070431047592	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATATATATATATTAT	NA	False	NA	NA	False	NA	NA	NA	44516157	44548802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44516250_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
tx.20321	chr9	-	2955	13	ISM	ENSMUSG00000048537.17	ENSMUST00000144251.8	3589	17	4723	0	-90	0	3prime_fragment	FALSE	canonical	3	19	junction_8	6.21601873299051	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	44619814	44597604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690
tx.20322	chr9	-	5465	22	NIC	ENSMUSG00000048537.17	novel	5461	22	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	12.2842376373573	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	2350	False	NA	NA	False	NA	NA	NA	44646511	44597604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690_44619820_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316_44639398_44646421
tx.20323	chr9	-	3490	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	19	563	19	-563	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	1727	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAACTTTGAAGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	44679123	44653423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
tx.20324	chr9	+	1581	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-208	-314	-15	-1	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTGGCTCATTAGTGT	NA	False	NA	NA	False	NA	NA	NA	44684241	44702191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
tx.20325	chr9	-	2803	8	ISM	ENSMUSG00000002032.18	ENSMUST00000002100.8	2448	9	65	3	0	-3	intron_retention	FALSE	canonical	3	7	junction_2	2.79941684889506	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGAAGTGTTTGTTC	8237	False	NA	NA	False	NA	NA	NA	44710539	44705075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_44706346_44706487_44706575_44706706_44706808_44706978_44707010_44707292_44707425_44707620_44707912_44709417_44709730_44709960
tx.20326	chr9	-	8189	10	NNC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	-645	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	4.45831169949753	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTGAGCTTCCTTTG	3171	False	NA	NA	False	NA	NA	NA	44732057	44714652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722202_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579
tx.20327	chr9	-	5425	7	NNC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	5503	-8	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	2.28521820013368	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCACTCTGCTGAGCT	9319	False	NA	NA	False	NA	NA	NA	44725909	44714659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722202_44722378_44724283_44724359_44725871
tx.20328	chr9	-	485	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	24	35	-11	18	multi-exon	FALSE	canonical	3	4613	junction_2	56	423	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTACTGCAGTCATAGT	NA	False	NA	NA	False	NA	NA	NA	44832016	44824549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44824765_44825948_44826110_44831907
tx.20329	chr9	-	4663	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	8	1182	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATACTTCTCTCTGG	5330	False	NA	NA	False	NA	NA	NA	44876868	44835963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
tx.2033	chr10	+	2905	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	41	-84	-5	-2	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAATGTCTTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	98942938	99033934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
tx.20330	chr9	-	3437	18	NIC	ENSMUSG00000059890.17	novel	3486	19	NA	NA	-5	68	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	10.0238469985589	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGTGTCTGTCTGAGT	5335	False	NA	NA	False	NA	NA	NA	44876863	44844200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
tx.20331	chr9	+	2960	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	147	0	-124	0	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	857	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	NA	False	NA	NA	NA	44953869	44965313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
tx.20332	chr9	+	2694	5	ISM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	1316	2	1045	-2	3prime_fragment	FALSE	canonical	3	426	junction_4	59.7384926157331	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGATTTTTATTATTT	NA	False	NA	NA	False	NA	NA	NA	44955038	44965311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
tx.20333	chr9	+	3410	6	FSM	ENSMUSG00000070305.11	ENSMUST00000114664.8	3424	6	14	0	-9	0	multi-exon	FALSE	canonical	3	16	junction_2	3.70944739819828	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTTCGTGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	44966497	44988734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44966617_44973338_44973506_44977636_44977848_44979504_44979671_44981953_44982018_44986051
tx.20334	chr9	+	1561	8	FSM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	228	-1	-29	1	multi-exon	FALSE	canonical	3	400	junction_2	224.259325108142	293	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGAGTGGCTTTTCT	596	False	NA	NA	False	NA	NA	NA	45281710	45307454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_45281787_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
tx.20335	chr9	+	1558	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	227	4	-30	0	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	518	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	595	False	NA	NA	False	NA	NA	NA	45281709	45307453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
tx.20336	chr9	+	589	6	FSM	ENSMUSG00000059412.8	ENSMUST00000041005.6	632	6	42	1	-34	0	multi-exon	FALSE	canonical	3	206	junction_5	6.73498329619309	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTGAGTGCTTATCATT	NA	False	NA	NA	False	NA	NA	NA	45314477	45321575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
tx.20337	chr9	-	2881	11	ISM	ENSMUSG00000043987.19	ENSMUST00000213154.2	6105	32	47941	-1316	-3255	4	3prime_fragment	FALSE	canonical	3	64	junction_3	8.47348806572594	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGAGTGTGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	45687084	45678239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974
tx.20338	chr9	-	5945	32	NIC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_21	18.7691490839651	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTCCTGTGAGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	45739949	45678243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
tx.20339	chr9	-	3877	19	ISM	ENSMUSG00000043987.19	ENSMUST00000213154.2	6105	32	41675	-1315	-9521	3	3prime_fragment	FALSE	canonical	3	25	junction_18	14.6457131468647	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTGAGTGTGCTGGT	NA	False	NA	NA	False	NA	NA	NA	45693350	45678240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249
tx.2034	chr10	+	3378	11	FSM	ENSMUSG00000019952.16	ENSMUST00000159990.2	3449	11	70	1	70	-1	multi-exon	FALSE	canonical	3	64	junction_10	9.48946784598589	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAATGTCTTCTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	98943034	99033935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
tx.20340	chr9	+	4067	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	0	1991	0	-76	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCGCTTGTAAAAATATG	7298	False	NA	NA	False	NA	NA	NA	45749877	45773706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
tx.20341	chr9	-	3499	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	441	24	-29	-24	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATGAGCTCATGGATGA	9561	False	NA	NA	False	NA	NA	NA	45817734	45774830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
tx.20342	chr9	-	3596	15	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	-20	-23	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.9340386434508	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGAGCTCATGGATGAA	9570	False	NA	NA	False	NA	NA	NA	45817725	45774829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
tx.20343	chr9	+	3451	16	ISM	ENSMUSG00000035382.10	ENSMUST00000216672.2	3599	17	1431	-59	1431	6	3prime_fragment	FALSE	canonical	3	28	junction_6	6.42702626933068	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACAAGTCCACCACTCC	NA	False	NA	NA	False	NA	NA	NA	45819713	45841016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
tx.20344	chr9	+	3453	17	FSM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	434	-11	-54	-3	multi-exon	FALSE	canonical	3	28	junction_7	6.25	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCACCACTCCCAGTA	NA	False	NA	NA	False	NA	NA	NA	45818228	45841021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
tx.20345	chr9	-	4256	26	FSM	ENSMUSG00000034908.17	ENSMUST00000038488.17	4248	26	-11	3	-11	-3	multi-exon	FALSE	canonical	3	112	junction_16	17.0789226826519	272	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTTGGGAGGTGCAG	NA	False	NA	NA	False	NA	NA	NA	45866567	45849157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
tx.20346	chr9	-	2716	14	ISM	ENSMUSG00000034908.17	ENSMUST00000114573.9	4012	27	9213	-17	-731	-1	3prime_fragment	FALSE	canonical	3	117	junction_11	16.0402599987782	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGGGAGGTGCAGGA	NA	False	NA	NA	False	NA	NA	NA	45857062	45849155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963
tx.20347	chr9	-	4207	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	208	2458	-8	-2458	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	466	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACTGATGTCTGTTTC	4120	False	NA	NA	False	NA	NA	NA	45896141	45876614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
tx.20348	chr9	-	4368	7	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	1	-2459	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	171.694253446837	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTACTGATGTCTGTTT	4140	False	NA	NA	False	NA	NA	NA	45896121	45876615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45892340_45892523_45896002
tx.20349	chr9	-	4167	6	FSM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	-4	-3369	-4	-2456	multi-exon	FALSE	canonical	3	18	junction_5	143.058869001541	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	9707	False	NA	NA	False	NA	NA	NA	45896696	45876612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896599
tx.2035	chr10	+	2760	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	33	3	33	-3	multi-exon	TRUE	canonical	2	10	junction_1	0	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGCGTGTTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	99099125	99103347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_99099954_99100405_99100844_99101853
tx.20350	chr9	+	6336	25	FSM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	-58	9	-58	-3	multi-exon	FALSE	canonical	3	33	junction_17	28.1424945589406	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGCTGATATGTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	45924059	46135483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
tx.20351	chr9	+	2655	14	ISM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-35	19387	9	3	5prime_fragment	FALSE	canonical	3	79	junction_9	9.59474708356782	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGGGAAACTGTGGGTGT	NA	False	NA	NA	False	NA	NA	NA	45924126	46114186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
tx.20352	chr9	+	3583	6	ISM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	197888	9	-8863	-3	3prime_fragment	FALSE	canonical	3	47	junction_1	6.54217089351845	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGCTGATATGTTGTTTG	2985	False	NA	NA	False	NA	NA	NA	46122005	46135483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
tx.20353	chr9	+	1843	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	102	1039	-27	120	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	464	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTGCGTTCATGTC	NA	False	NA	NA	False	NA	NA	NA	46184463	46192902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
tx.20354	chr9	+	2204	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	8	327	8	0	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCCTAACTGGGTATT	NA	False	NA	NA	False	NA	NA	NA	46194313	46210081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
tx.20355	chr9	+	2230	6	ISM	ENSMUSG00000032076.21	ENSMUST00000151624.2	1112	7	257596	-1249	257596	1249	3prime_fragment	FALSE	canonical	3	300	junction_1	18.4780951399218	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGCAAACGTCTAGT	1846	False	NA	NA	False	NA	NA	NA	47699266	47726601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070
tx.20356	chr9	+	1306	8	ISM	ENSMUSG00000032076.21	ENSMUST00000152459.8	1784	12	257758	20861	257596	-4722	internal_fragment	FALSE	canonical	3	173	junction_7	55.5356109323797	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAAGTGTATTTG	1846	False	NA	NA	False	NA	NA	NA	47699266	47741024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674
tx.20357	chr9	+	4228	10	ISM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	257712	-2349	257596	-2	3prime_fragment	FALSE	canonical	3	105	junction_8	78.429019572548	96	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGATCCTTTAAATCTC	1846	False	NA	NA	False	NA	NA	NA	47699266	47764676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
tx.20358	chr9	+	4199	9	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	257712	-2	257596	2	3prime_fragment	FALSE	canonical	3	143	junction_7	61.313614923604	109	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTTAAATCTCTTTC	1846	False	NA	NA	False	NA	NA	NA	47699266	47764680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
tx.20359	chr9	-	1076	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	1	0	1	0	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	NA	False	NA	NA	NA	48391910	48379811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
tx.2036	chr10	+	5449	10	FSM	ENSMUSG00000019966.19	ENSMUST00000105283.9	5648	10	195	4	1	-4	multi-exon	FALSE	canonical	2	4	junction_9	4.46661138716484	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTGCCCTCTCATTTG	NA	False	NA	NA	False	NA	NA	NA	99851686	99936274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_99851898_99887707_99887822_99899945_99900009_99912596_99912768_99915835_99915993_99916718_99916803_99923208_99923319_99924014_99924083_99925057_99925134_99931879
tx.20360	chr9	-	2008	3	FSM	ENSMUSG00000032026.8	ENSMUST00000214161.2	553	3	-12	-1443	1	13	multi-exon	FALSE	canonical	3	1141	junction_1	21.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTGTTAGTAGTGT	NA	False	NA	NA	False	NA	NA	NA	48391905	48384772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_48386498_48390609_48390694_48391706
tx.20361	chr9	-	1893	6	FSM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-17	-9	-12	1	multi-exon	FALSE	canonical	0	0	junction_4	182.483314305719	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTCTCTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	48406611	48399999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582_48405688_48406454
tx.20362	chr9	-	2705	4	ISM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	42	-1	39	1	intron_retention	FALSE	canonical	3	400	junction_3	16.8588914885357	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTCTCTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	48406555	48399999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318
tx.20363	chr9	-	1788	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	-14	-1	-12	1	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTCTCTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	48406611	48399999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
tx.20364	chr9	-	1001	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	29	13	29	1	multi-exon	FALSE	canonical	3	43	junction_2	2.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTCTCTGAATGCAG	NA	False	NA	NA	False	NA	NA	NA	48516424	48503189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_48503663_48514653_48514862_48516104
tx.20365	chr9	+	4043	23	NIC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_12	175.933525434753	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	NA	False	NA	NA	NA	48896674	48953810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
tx.20366	chr9	+	4213	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-80	0	0	0	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	1421	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	NA	False	NA	NA	NA	48896684	48953810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
tx.20367	chr9	+	4139	24	FSM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	-29	-1	0	1	multi-exon	FALSE	canonical	3	58	junction_12	166.491369690667	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAGCATGACCCTTTT	NA	False	NA	NA	False	NA	NA	NA	48896684	48953811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935280_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
tx.20368	chr9	+	4177	23	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-27	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_7	176.835807721632	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAGCATGACCCTTTT	NA	False	NA	NA	False	NA	NA	NA	48896647	48953811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
tx.20369	chr9	+	3326	11	ISM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	39628	0	1415	0	3prime_fragment	FALSE	canonical	3	718	junction_3	56.455734872553	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	NA	False	NA	NA	NA	48936392	48953810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
tx.2037	chr10	+	1251	2	Genic_Genomic	ENSMUSG00000112856.2	novel	910	1	NA	NA	-955	263	multi-exon	FALSE	canonical	3	20	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAGTATTCTAGA	NA	False	NA	NA	False	NA	NA	NA	100185999	100188127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr10_+_100186070_100186946
tx.20370	chr9	+	2873	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	-10	0	-10	0	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	303	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGTGTCTTTAATAA	NA	False	NA	NA	False	NA	NA	NA	48966902	48990072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
tx.20372	chr9	-	2299	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	28	1301	18	-1301	multi-exon	FALSE	canonical	3	14	junction_3	5.49706167646225	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATGTCTGCCGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	49397497	49349563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
tx.20375	chr9	-	5793	17	ISM	ENSMUSG00000039542.17	ENSMUST00000193547.6	6050	18	229022	12	-1354	0	3prime_fragment	FALSE	canonical	1	2	junction_5	44.1668976015975	86	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCAACTCTAG	9144	False	NA	NA	False	NA	NA	NA	49481203	49413447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
tx.20376	chr9	-	5806	17	ISM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	228969	-2910	-1354	-2	3prime_fragment	FALSE	canonical	1	2	junction_5	49.2306037313174	51	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTCTAGTCCAACTGGG	9144	False	NA	NA	False	NA	NA	NA	49481203	49413437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
tx.20377	chr9	-	4758	13	NIC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	-1354	2308	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	38.7544800277622	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCGTTGGTGCTTTCAT	9144	False	NA	NA	False	NA	NA	NA	49481203	49440267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
tx.20378	chr9	-	2218	13	NNC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	-1354	-654	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	44.198651940227	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGGCACGAATTTTCTC	9144	False	NA	NA	False	NA	NA	NA	49481203	49443229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_49443699_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
tx.20379	chr9	+	1347	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	-2	344	-2	-344	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCGAAATGTGCTAAATTG	NA	False	NA	NA	False	NA	NA	NA	50405822	50416438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
tx.2038	chr10	-	5992	14	FSM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	0	1	0	-1	multi-exon	FALSE	canonical	3	57	junction_8	14.4496677957759	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATTGTCTTGTGATG	NA	False	NA	NA	False	NA	NA	NA	100323212	100279764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
tx.20380	chr9	-	1084	6	FSM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	-39	1	5	0	multi-exon	FALSE	canonical	3	95	junction_5	16.1294761229248	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGTTTTCAGGATTTAT	7920	False	NA	NA	False	NA	NA	NA	50439990	50432917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439856
tx.20381	chr9	-	4811	3	ISM	ENSMUSG00000032067.7	ENSMUST00000213640.2	3117	4	-86	-1	-18	0	intron_retention	FALSE	canonical	3	124	junction_1	9	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7868	False	NA	NA	False	NA	NA	NA	50440042	50432916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_50433637_50433828_50433900_50436022
tx.20382	chr9	-	1159	7	NIC	ENSMUSG00000032067.7	novel	589	7	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	39.4574313518872	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCGTTTTCAGGATTTA	7931	False	NA	NA	False	NA	NA	NA	50439979	50432918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439445_50439533_50439856
tx.20383	chr9	-	1011	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	-8	-108	7	2	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTATTTTTTTATT	6969	False	NA	NA	False	NA	NA	NA	50472618	50468116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
tx.20384	chr9	-	1255	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	-9	-15	-9	15	multi-exon	FALSE	canonical	3	1351	junction_3	46.783187863448	767	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTACTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	50515121	50507641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
tx.20385	chr9	+	503	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	15	0	15	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTCTTCTAAATCCC	8828	False	NA	NA	False	NA	NA	NA	50515224	50516620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_50515340_50516232
tx.20386	chr9	-	3295	6	NNC	ENSMUSG00000059820.15	novel	3316	6	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	45.4990109782619	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGCTCTGTTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	50528748	50516541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_50519234_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
tx.20387	chr9	-	3662	6	FSM	ENSMUSG00000059820.15	ENSMUST00000147671.2	1225	6	22	-2459	22	-2	multi-exon	FALSE	canonical	3	45	junction_5	31.9023510105447	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGCTCTGTTACTTTTT	128	False	NA	NA	False	NA	NA	NA	50528542	50516541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
tx.20388	chr9	-	3287	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	27	2	27	-2	multi-exon	FALSE	canonical	3	44	junction_5	32.2800247831379	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGCTCTGTTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	50528737	50516541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
tx.20389	chr9	-	4353	5	FSM	ENSMUSG00000059820.15	ENSMUST00000145139.8	2805	5	18	-1566	15	-749	multi-exon	FALSE	canonical	3	45	junction_4	31.5386667441729	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCCAGATGTGCC	121	False	NA	NA	False	NA	NA	NA	50528549	50517292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
tx.2039	chr10	-	6069	15	NIC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	29.291288668079	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGATTGTCTTGTGATGT	NA	False	NA	NA	False	NA	NA	NA	100323213	100279763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100320912_100320988_100323023
tx.20390	chr9	-	2636	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	252	1147	252	748	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	1959	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTGTAGAAGTGGAGCT	NA	False	NA	NA	False	NA	NA	NA	50570828	50547079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
tx.20391	chr9	-	5669	20	FSM	ENSMUSG00000032064.18	ENSMUST00000117646.8	5719	20	51	-1	-41	1	multi-exon	FALSE	canonical	3	25	junction_7	7.12181308422569	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCACTTCTTCATTTTC	NA	False	NA	NA	False	NA	NA	NA	50639316	50574054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
tx.20392	chr9	-	5681	19	NIC	ENSMUSG00000032064.18	novel	5719	20	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	10.077477638554	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCTTCATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	50639415	50574051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
tx.20393	chr9	-	2318	16	ISM	ENSMUSG00000032064.18	ENSMUST00000117646.8	5719	20	47	18829	-45	-4881	5prime_fragment	FALSE	canonical	3	25	junction_3	7.76316086827181	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACTCTTGATATCACTG	NA	False	NA	NA	False	NA	NA	NA	50639320	50592884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
tx.20394	chr9	-	1289	4	FSM	ENSMUSG00000032062.4	ENSMUST00000034564.4	1257	4	-32	0	-32	0	multi-exon	FALSE	canonical	3	23	junction_3	2.16024689946929	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGATTGATTGTTCCTG	2084	False	NA	NA	False	NA	NA	NA	50657868	50650990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
tx.20395	chr9	+	2643	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	12	3	-3	-3	multi-exon	TRUE	canonical	3	72	junction_2	7.15454401062709	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	50679547	50684645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
tx.20396	chr9	+	1886	4	ISM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	325	679	116	0	3prime_fragment	FALSE	canonical	3	72	junction_1	8.25967446224258	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTCTGGACTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	50679860	50683969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_50680145_50681409_50681614_50681931_50682091_50682730
tx.20397	chr9	+	2531	14	FSM	ENSMUSG00000032059.14	ENSMUST00000162073.8	2530	14	-6	5	-6	-5	multi-exon	FALSE	canonical	3	64	junction_3	42.7472273227982	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTTTAATGTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	50686598	50754837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
tx.20398	chr9	+	2608	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	280	-15	-6	1	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTTTCAGTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	50686598	50754843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
tx.20399	chr9	+	3923	14	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	-6	1163	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	59.440487865033	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGAACGATTTGATCA	NA	False	NA	NA	False	NA	NA	NA	50686839	50756005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
tx.204	chr1	-	4133	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-30	-2	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_22	52.2679246805651	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	38168912	38091868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
tx.2040	chr10	+	9086	53	NIC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	1	-288	combination_of_known_junctions	FALSE	canonical	3	23	junction_17	7.43263633176255	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCTTCTTGGTCACGAT	NA	False	NA	NA	False	NA	NA	NA	100323420	100410414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
tx.20400	chr9	+	3228	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	15	187	-5	-187	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	894	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGTAAATGCTTTTA	2	True	NA	NA	False	NA	NA	NA	50768251	50792544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
tx.20401	chr9	-	8635	15	FSM	ENSMUSG00000037112.17	ENSMUST00000176824.8	5369	15	-109	-3157	-19	3157	multi-exon	FALSE	canonical	3	33	junction_7	8.64875831597596	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	NA	False	NA	NA	NA	50920345	50800943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
tx.20402	chr9	-	7377	16	FSM	ENSMUSG00000037112.17	ENSMUST00000176663.8	4107	16	-117	-3153	20	3153	multi-exon	FALSE	canonical	3	21	junction_1	10.4796098315835	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGGTGATATGAAT	NA	False	NA	NA	False	NA	NA	NA	50920353	50800947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
tx.20403	chr9	-	7304	16	NNC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	22	3157	intron_retention	FALSE	canonical	3	11	junction_8	13.1969693490589	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	NA	False	NA	NA	NA	50920351	50800943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
tx.20404	chr9	-	8581	15	NNC	ENSMUSG00000037112.17	novel	5369	15	NA	NA	7	3157	intron_retention	FALSE	canonical	3	11	junction_7	12.2017479510611	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	NA	False	NA	NA	NA	50920366	50800943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
tx.20405	chr9	-	6503	16	NNC	ENSMUSG00000037112.17	novel	3552	16	NA	NA	-13	3060	intron_retention	FALSE	canonical	2	11	junction_1	14.4907633415988	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATGTAAATGGGGTCA	NA	False	NA	NA	False	NA	NA	NA	50920339	50801040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_50804690_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
tx.20406	chr9	+	1746	11	NNC	ENSMUSG00000053199.14	novel	7161	15	NA	NA	-16	-8406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2.41867732448956	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTTGAATCCTTCTAG	NA	False	NA	NA	False	NA	NA	NA	51676620	51751543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_51676912_51697035_51697119_51727976_51728142_51732462_51732613_51736192_51736235_51737138_51737224_51738135_51738214_51740629_51740697_51742938_51743128_51750097_51750277_51751126
tx.20407	chr9	-	944	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-69	0	-59	0	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	968	False	NA	NA	False	NA	NA	NA	51874915	51854605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
tx.20408	chr9	+	4250	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	133	-3	-23	-3	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	1434	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGGTCCGCTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	51959547	52000032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
tx.20409	chr9	-	6147	6	NNC	ENSMUSG00000035164.9	novel	6764	6	NA	NA	-328	-2	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_4	2.0976176963403	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTTATGTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	52080200	52023286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974_52055727_52080103
tx.2041	chr10	-	2402	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	151	11	4	-11	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATAATAAGTGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	100425106	100408137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
tx.20410	chr9	-	3181	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-53	0	-53	0	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	583	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	False	NA	NA	False	NA	NA	NA	53159406	53009934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
tx.20411	chr9	+	3565	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	-20	97	-20	-97	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	193	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAACTCCATGTACTT	9252	False	NA	NA	False	NA	NA	NA	53295304	53313070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
tx.20412	chr9	-	5559	21	ISM	ENSMUSG00000034218.17	ENSMUST00000118282.9	9819	62	69703	-2024	-10646	2024	3prime_fragment	FALSE	canonical	0	0	junction_13	14.0259580777928	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAACCGTATGTCCATT	NA	False	NA	NA	False	NA	NA	NA	53375563	53348424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452
tx.20413	chr9	-	11801	62	NIC	ENSMUSG00000034218.17	novel	9787	64	NA	NA	17	2016	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	19.0626063687385	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGACTATACAACCGTA	NA	False	NA	NA	False	NA	NA	NA	53448023	53348432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
tx.20414	chr9	-	12021	63	NIC	ENSMUSG00000034218.17	novel	9787	64	NA	NA	4	2028	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	18.3797169683776	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCGTATGTCCATTTTAT	NA	False	NA	NA	False	NA	NA	NA	53448036	53348420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
tx.20415	chr9	-	1505	7	FSM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-62	-200	5	200	multi-exon	FALSE	canonical	3	42	junction_1	25.1837690233655	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAATGTCTTGTGCTCCC	NA	False	NA	NA	False	NA	NA	NA	53448035	53432946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
tx.20416	chr9	-	756	5	ISM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-44	5251	23	96	5prime_fragment	FALSE	canonical	3	85	junction_4	8.07774721070176	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACGACTCAGAGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	53448017	53438397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
tx.20417	chr9	+	5904	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	-10	168	-10	-168	multi-exon	TRUE	canonical	3	111	junction_15	17.5635277962748	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGATTTATATTTA	NA	False	NA	NA	False	NA	NA	NA	53448336	53485474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
tx.20418	chr9	+	5724	19	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-1	-168	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	32.2756740565161	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGATTTATATTTA	NA	False	NA	NA	False	NA	NA	NA	53448345	53485474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
tx.20419	chr9	+	4336	6	ISM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	25314	170	-1173	-170	3prime_fragment	FALSE	canonical	3	111	junction_3	18.6225669551756	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTTGGATTTATATT	NA	False	NA	NA	False	NA	NA	NA	53473660	53485472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
tx.2042	chr10	-	6521	4	NIC	ENSMUSG00000046567.11	novel	562	5	NA	NA	0	-69	intron_retention	FALSE	canonical	3	50	junction_2	5.18544972870135	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTTTGTCTGATTTT	NA	False	NA	NA	False	NA	NA	NA	100425097	100408195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_100414294_100419775_100419872_100422052_100422171_100424888
tx.20420	chr9	+	3850	2	ISM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	33065	-1011	6578	1011	3prime_fragment	FALSE	canonical	3	119	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTATTTTGTGATATATG	NA	False	NA	NA	False	NA	NA	NA	53481411	53486653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_53482479_53483870
tx.20421	chr9	-	1552	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	29	1824	-23	141	multi-exon	FALSE	canonical	3	149	junction_5	11.4912830779187	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGGATACTCTATTATT	NA	False	NA	NA	False	NA	NA	NA	53521653	53493645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
tx.20422	chr9	-	5663	17	ISM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	11849	-2371	3019	-71	3prime_fragment	FALSE	canonical	3	327	junction_11	43.5953964742838	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	NA	False	NA	NA	NA	53566962	53525952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571
tx.20423	chr9	-	5986	20	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	16	-71	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	120.032613296752	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	NA	False	NA	NA	NA	53578771	53525952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53566953_53567024_53569870_53569981_53578337
tx.20424	chr9	-	5590	19	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	56	-71	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	82.5942222891865	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	NA	False	NA	NA	NA	53581258	53525952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
tx.20425	chr9	-	5929	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	24	-2368	0	-74	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	542	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCATCTATCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	53578787	53525955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
tx.20426	chr9	-	6176	20	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	3	-72	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	116.29602118274	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCATCTATCCAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	53578804	53525953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53578337
tx.20427	chr9	-	2984	2	FSM	ENSMUSG00000055069.4	ENSMUST00000068449.4	2971	2	15	-28	15	28	multi-exon	FALSE	canonical	3	13	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTTTGAATATTTATA	NA	False	NA	NA	False	NA	NA	NA	53617517	53595381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_53598037_53617188
tx.20428	chr9	+	2388	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	177	-7	177	7	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	254	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCACAATGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	53678998	53725445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
tx.20429	chr9	-	2604	2	ISM	ENSMUSG00000041268.18	ENSMUST00000154092.2	4039	11	13087	113	13087	-17	3prime_fragment	FALSE	canonical	3	27	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTGTTAGAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	54276090	54272560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_54273912_54274837
tx.2043	chr10	+	3625	12	FSM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-80	-2	-55	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2574867983458	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	NA	NA	NA	103203588	103255238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
tx.20430	chr9	-	3046	16	FSM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-86	-2	-31	2	multi-exon	FALSE	canonical	3	8	junction_1	17.8940089291236	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTTTAGATTGGTTG	6901	False	NA	NA	False	NA	NA	NA	54408941	54330454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
tx.20431	chr9	-	2793	13	ISM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-174	22158	-119	0	5prime_fragment	FALSE	canonical	3	29	junction_1	10.0950345329881	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTGGTTGGTAGTTG	6813	False	NA	NA	False	NA	NA	NA	54409029	54352614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
tx.20432	chr9	+	2432	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-32	3	-2	-3	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	1852	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGAGGCGTTTGCATT	NA	False	NA	NA	False	NA	NA	NA	54493762	54511942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
tx.20433	chr9	+	3003	7	FSM	ENSMUSG00000032285.16	ENSMUST00000070070.8	3003	7	1	-1	1	1	multi-exon	FALSE	canonical	3	8	junction_3	1.95078331845327	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTTTGCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	54606843	54623600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_54607145_54613346_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
tx.20434	chr9	-	1268	11	FSM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	28	-6	6	1	multi-exon	FALSE	canonical	3	544	junction_10	185.351584832717	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTGTGAACGTGCTG	5449	False	NA	NA	False	NA	NA	NA	54641775	54624441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
tx.20435	chr9	-	1183	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	5	-1	5	1	multi-exon	FALSE	canonical	3	455	junction_10	209.060852385137	225	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTGTGAACGTGCTG	5428	False	NA	NA	False	NA	NA	NA	54641796	54624441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
tx.20436	chr9	+	772	4	FSM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	30	0	30	0	multi-exon	FALSE	canonical	3	250	junction_3	35.3679076125361	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGCTCTTTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	54672061	54680394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_54672256_54672766_54672946_54675667_54675782_54680109
tx.20437	chr9	+	5828	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-60	2	-60	-2	multi-exon	TRUE	canonical	3	193	junction_6	38.4690587449917	341	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGACTCGTTGTGTTTT	2566	False	NA	NA	False	NA	NA	NA	54771012	54819812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
tx.20438	chr9	+	5602	21	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-54	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	64.8093164599041	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGACTCGTTGTGTTT	2572	False	NA	NA	False	NA	NA	NA	54771018	54819811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
tx.20439	chr9	+	5136	5	FSM	ENSMUSG00000035878.14	ENSMUST00000039742.8	5110	5	-32	6	-32	-6	multi-exon	FALSE	canonical	2	6	junction_2	1.29903810567666	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTACCTTTTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	54824534	54857202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_54825143_54827757_54828109_54829478_54829619_54844422_54844607_54853349
tx.2044	chr10	+	3853	12	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-155	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	31.6193789307593	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGTTCGTGTCCCTCATT	NA	False	NA	NA	False	NA	NA	NA	103203488	103255236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
tx.20440	chr9	+	1153	9	FSM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	12	0	-3	0	multi-exon	FALSE	canonical	3	1650	junction_8	116.746252616519	718	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGTGAAAGGATACTT	NA	False	NA	NA	False	NA	NA	NA	54858085	54865314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
tx.20441	chr9	+	2792	6	FSM	ENSMUSG00000035594.11	ENSMUST00000213960.2	1737	6	-101	-954	-34	0	multi-exon	FALSE	canonical	1	1	junction_4	1.2	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGGTGTCTCATACC	NA	False	NA	NA	False	NA	NA	NA	54888715	54915063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_54889006_54905295_54905448_54907735_54907781_54909683_54909794_54911614_54912444_54913697
tx.20442	chr9	+	2932	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	524	0	-17	0	multi-exon	TRUE	canonical	3	762	junction_1	63.2035402489449	1142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	False	NA	NA	False	NA	NA	NA	55056661	55114813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
tx.20443	chr9	+	2078	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	34	0	-27	0	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	1086	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	NA	False	NA	NA	NA	55116242	55131717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
tx.20444	chr9	-	1334	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	63	-5	-60	5	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	1086	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCAGAAACATGCCTAGC	NA	False	NA	NA	False	NA	NA	NA	55419464	55361786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
tx.20445	chr9	-	4883	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	-22	370	-4	-366	multi-exon	FALSE	canonical	3	40	junction_24	10.0574521500229	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTATCAAGTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	55845407	55457532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
tx.20446	chr9	-	4827	32	ISM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	16762	373	-1734	-369	3prime_fragment	FALSE	canonical	3	40	junction_24	10.0946612238215	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGAGTATCAAGTATTT	NA	False	NA	NA	False	NA	NA	NA	55828623	55457535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549
tx.20447	chr9	-	5257	33	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_32	14.4078090262711	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATGCCAAGCACTGC	NA	False	NA	NA	False	NA	NA	NA	55845436	55457169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845371
tx.20448	chr9	+	2008	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	13	3	0	-3	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	331	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACGTGCACCTGAGACA	973	False	NA	NA	False	NA	NA	NA	55949153	55966358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
tx.20449	chr9	-	1696	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	20	0	20	0	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	536	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	False	NA	NA	False	NA	NA	NA	56068321	56043167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
tx.2045	chr10	+	2334	5	ISM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-77	23075	-52	-858	5prime_fragment	FALSE	canonical	3	31	junction_1	35.7596140918774	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAATCAATTGATTTTA	NA	False	NA	NA	False	NA	NA	NA	103203591	103232161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850
tx.20450	chr9	-	8571	4	ISM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	159379	-3998	-14623	-5	3prime_fragment	FALSE	canonical	3	41	junction_2	3.55902608401044	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAGACTTGAAGTGC	NA	False	NA	NA	False	NA	NA	NA	56165972	56108414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810
tx.20451	chr9	-	11036	7	FSM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	-37	-4003	-37	0	multi-exon	FALSE	canonical	3	31	junction_4	5.42883249163411	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACTTGAAGTGCATGTC	NA	False	NA	NA	False	NA	NA	NA	56325388	56108409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325224
tx.20452	chr9	+	1990	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	181	-471	1	471	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTAGATGGCTCTTGA	NA	False	NA	NA	False	NA	NA	NA	56326108	56398080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
tx.20453	chr9	+	3569	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	206	3	0	-3	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATGTGACCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	56326098	56404217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
tx.20454	chr9	+	3576	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	67.6052448838289	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATGTGACCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	56326098	56404217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401809
tx.20455	chr9	-	3435	2	FSM	ENSMUSG00000049556.6	ENSMUST00000114256.2	2782	2	-40	-613	-40	0	multi-exon	TRUE	canonical	3	12	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTGACTGCTCTCA	6183	False	NA	NA	False	NA	NA	NA	56542952	56525758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_56528600_56542358
tx.20456	chr9	-	3752	6	NIC	ENSMUSG00000049556.6	novel	3627	7	NA	NA	-518	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.16619037896906	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTATAGCTAGTCGGAA	NA	False	NA	NA	False	NA	NA	NA	56704270	56526394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_56528600_56560883_56561117_56592403_56592566_56631584_56631630_56682822_56682933_56703273
tx.20457	chr9	-	4622	2	FSM	ENSMUSG00000032733.7	ENSMUST00000050916.7	4571	2	-60	9	-60	-9	multi-exon	FALSE	canonical	1	2	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGTGTAATAGAAGCACAG	NA	False	NA	NA	False	NA	NA	NA	56835715	56824485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_56825989_56832596
tx.20458	chr9	+	2802	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	32	-1443	32	1443	multi-exon	TRUE	canonical	3	166	junction_1	20.9105236663265	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56858193	56891933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
tx.20459	chr9	+	1316	8	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	6135	0	6135	0	3prime_fragment	FALSE	canonical	3	194	junction_5	16.2468207250979	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	False	NA	NA	False	NA	NA	NA	56864296	56890490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
tx.2046	chr10	+	2541	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-118	-847	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTAATATATTTTCT	NA	False	NA	NA	False	NA	NA	NA	103203525	103232172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
tx.20460	chr9	+	4079	13	FSM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	23	-1	23	1	multi-exon	FALSE	canonical	3	24	junction_7	5.9207732227772	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTAGTTTCATCAATT	NA	False	NA	NA	False	NA	NA	NA	56902229	56970092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
tx.20461	chr9	+	4099	13	FSM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	3	-1	3	1	multi-exon	FALSE	canonical	3	24	junction_7	5.9207732227772	16	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTAGTTTCATCAATT	NA	False	NA	NA	False	NA	NA	NA	56902209	56970092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
tx.20462	chr9	+	4990	22	NIC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	-18	-3	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	80.3294520190322	54	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	NA	NA	NA	56979305	57035645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_56979348_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
tx.20463	chr9	+	5111	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	304	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTAACATAAGTCCCT	NA	False	NA	NA	False	NA	NA	NA	56983641	57035643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
tx.20464	chr9	+	3235	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	73	512	-5	3	multi-exon	FALSE	canonical	2	160	junction_17	33.744593641056	339	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTGCCTTGCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	57038046	57049494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
tx.20465	chr9	-	1719	10	FSM	ENSMUSG00000032298.14	ENSMUST00000190245.7	1693	10	-14	-12	-14	12	multi-exon	FALSE	canonical	3	40	junction_9	6.09391520035648	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGCAGGCTACCTA	NA	False	NA	NA	False	NA	NA	NA	57055425	57050071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
tx.20466	chr9	-	842	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	16	0	1	0	multi-exon	FALSE	canonical	3	701	junction_7	157.218553197095	257	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6293	False	NA	NA	False	NA	NA	NA	57065599	57062322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
tx.20467	chr9	-	1915	7	FSM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	22	4	22	0	multi-exon	FALSE	canonical	3	898	junction_5	106.241470245851	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6353	False	NA	NA	False	NA	NA	NA	57065539	57062322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350
tx.20468	chr9	-	3019	2	ISM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	4421	0	3318	0	3prime_fragment	FALSE	canonical	3	41	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	57165474	57160399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_57161613_57163668
tx.20469	chr9	-	4144	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	8	0	-3	0	multi-exon	FALSE	canonical	3	41	junction_1	39.5	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	57169887	57160399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57161613_57163668_57166424_57169711
tx.2047	chr10	+	3289	12	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	382	-4	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	33.5120553120764	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGGAGTTCGTGTCCCT	NA	False	NA	NA	False	NA	NA	NA	103204085	103255232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
tx.20470	chr9	-	5062	3	NIC	ENSMUSG00000032300.8	novel	4152	3	NA	NA	231	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	19	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGGATCTAGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	57169599	57160401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_57161613_57163668_57166424_57168503
tx.20471	chr9	-	1657	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	8	0	-2	0	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	57347382	57321243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
tx.20472	chr9	-	3325	7	FSM	ENSMUSG00000040722.8	ENSMUST00000214256.2	1025	7	18	-2318	-5	-1	multi-exon	FALSE	canonical	3	62	junction_6	45.7262385167301	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	NA	False	NA	NA	NA	57375325	57348610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375098
tx.20473	chr9	-	3187	6	NIC	ENSMUSG00000040722.8	novel	1025	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_5	39.9669863762581	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	NA	False	NA	NA	NA	57375343	57348609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375098
tx.20474	chr9	-	3235	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	-10	0	-8	0	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	NA	False	NA	NA	NA	57375351	57348609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
tx.20475	chr9	-	3077	6	FSM	ENSMUSG00000040722.8	ENSMUST00000215734.2	675	6	-30	-2372	-7	0	multi-exon	FALSE	canonical	3	101	junction_3	25.4715527598927	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	NA	False	NA	NA	NA	57375350	57348609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
tx.20476	chr9	+	1361	2	Genic_Genomic	ENSMUSG00000062309.9	novel	1423	1	NA	NA	-8	0	multi-exon	FALSE	canonical	3	12	junction_1	0	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCAGTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	57411300	57412731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr9_+_57411538_57411607
tx.20477	chr9	+	682	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	-36	-1	-31	1	multi-exon	FALSE	canonical	3	7868	junction_4	746.021908190369	1168	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	341	False	NA	NA	False	NA	NA	NA	57428525	57439710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
tx.20478	chr9	+	2998	4	FSM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	5	-2	5	0	multi-exon	FALSE	canonical	3	38	junction_3	8.73053390247253	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	False	NA	NA	False	NA	NA	NA	57444815	57450467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57447937
tx.20479	chr9	+	3042	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	-25	0	10	0	multi-exon	FALSE	canonical	0	0	junction_4	22.8582589013249	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	False	NA	NA	False	NA	NA	NA	57444820	57450467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
tx.2048	chr10	-	1976	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	-1	58	1	8	multi-exon	FALSE	canonical	3	65	junction_11	25.2121576340063	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGTGTTTTCATTCTCA	NA	False	NA	NA	False	NA	NA	NA	105677240	105599107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
tx.20480	chr9	-	1759	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	12	9	12	-9	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGAAGAGCAGTCAGC	8963	False	NA	NA	False	NA	NA	NA	57460034	57451547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
tx.20481	chr9	+	2333	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	7	0	7	0	multi-exon	TRUE	canonical	3	243	junction_4	15.3927742788621	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGCCCTGATGTCAAT	NA	False	NA	NA	False	NA	NA	NA	57468232	57496078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
tx.20482	chr9	+	2453	10	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	104.968190360958	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGGCCCTGATGTCAA	NA	False	NA	NA	False	NA	NA	NA	57468240	57496077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_57468394_57484475_57484545_57484921_57485021_57485556_57485686_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
tx.20483	chr9	-	2746	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	2	1	2	0	multi-exon	FALSE	canonical	3	100	junction_12	11.433381924095	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCTCGGCGCTTCCT	NA	False	NA	NA	False	NA	NA	NA	57552934	57533929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
tx.20484	chr9	+	3031	6	FSM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	6	1240	-6	-1240	multi-exon	FALSE	canonical	3	26	junction_2	95.7613700820952	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	NA	False	NA	NA	False	NA	NA	NA	57615843	57657446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57651867_57652086_57655443
tx.20485	chr9	+	3351	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	21	2336	-6	-1240	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	NA	False	NA	NA	False	NA	NA	NA	57615843	57657446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
tx.20486	chr9	-	1771	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	725	0	-14	0	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGTACCAGTGTGTC	9793	False	NA	NA	False	NA	NA	NA	57672418	57657991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
tx.20487	chr9	-	4042	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	11	0	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	57744065	57697635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
tx.20488	chr9	-	1964	8	FSM	ENSMUSG00000004661.16	ENSMUST00000098686.4	1969	8	10	-5	10	4	multi-exon	FALSE	canonical	3	208	junction_2	15.8603600340019	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	57744066	57701964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
tx.20489	chr9	+	1315	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216925.2	1319	11	4	0	-3	0	multi-exon	FALSE	canonical	3	39	junction_1	82.3315856764583	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	57818265	57837251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57818291_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
tx.2049	chr10	+	3951	3	FSM	ENSMUSG00000019897.9	ENSMUST00000133538.2	4314	3	40	323	40	-323	multi-exon	FALSE	canonical	3	411	junction_2	58.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGCTGTACTAACATT	NA	False	NA	NA	False	NA	NA	NA	105676967	105683371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_105677517_105678402_105681311_105682877
tx.20490	chr9	+	1425	12	NIC	ENSMUSG00000055720.11	novel	1319	11	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	95.5400482857649	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGTCCAGTGCTTGG	NA	False	NA	NA	False	NA	NA	NA	57818265	57837252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_57818291_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
tx.20491	chr9	+	1364	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	1	-1	1	1	multi-exon	FALSE	canonical	3	118	junction_1	59.3140792729686	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGTCCAGTGCTTGG	NA	False	NA	NA	False	NA	NA	NA	57818269	57837252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
tx.20492	chr9	+	1464	12	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	84.997131696865	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGTCCAGTGCTTGG	NA	False	NA	NA	False	NA	NA	NA	57818278	57837252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_57818343_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
tx.20493	chr9	+	1513	2	FSM	ENSMUSG00000097604.2	ENSMUST00000181289.2	2169	2	44	612	44	-612	multi-exon	FALSE	canonical	2	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	57905367	57914122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57905602_57912843
tx.20494	chr9	+	2729	10	NIC	ENSMUSG00000032323.14	novel	539	4	NA	NA	-8335	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.0245407953654	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTTTGTATCTGTCAGA	NA	False	NA	NA	False	NA	NA	NA	57905358	57934305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_57905602_57912843_57913839_57923556_57923713_57925476_57925677_57926575_57926780_57927991_57928150_57932360_57932528_57932810_57932890_57933367_57933566_57933976
tx.20495	chr9	+	2723	18	ISM	ENSMUSG00000032327.15	ENSMUST00000167479.8	2871	19	397	-8	252	8	3prime_fragment	TRUE	canonical	1	1	junction_1	1.92416790985837	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAAGCTAATCTGAGCTC	NA	False	NA	NA	False	NA	NA	NA	58042344	58061287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_58042486_58046262_58046330_58046638_58046725_58047696_58047837_58048141_58048166_58048338_58048506_58050197_58050321_58052743_58052812_58052995_58053076_58053280_58053343_58054744_58054908_58056462_58056539_58057360_58057495_58058443_58058562_58058645_58058748_58059161_58059326_58059727_58059884_58060435
tx.20496	chr9	-	3883	2	FSM	ENSMUSG00000051243.15	ENSMUST00000163200.3	4123	2	233	7	86	-2	multi-exon	FALSE	canonical	3	11	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGACTCGGTGAGATTT	NA	False	NA	NA	False	NA	NA	NA	58108765	58103586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_58107267_58108562
tx.20497	chr9	-	4078	8	ISM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	2496	9	2333	1	3prime_fragment	FALSE	canonical	3	249	junction_4	53.1128947792976	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTAACATTCTGATTG	4647	False	NA	NA	False	NA	NA	NA	58154573	58125367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257
tx.20498	chr9	-	3374	6	ISM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	15112	0	-1279	0	3prime_fragment	FALSE	canonical	3	178	junction_4	77.9487010796203	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGATTGCAATCTCTA	NA	False	NA	NA	False	NA	NA	NA	58141957	58125358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635
tx.20499	chr9	-	4455	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	24	2	24	-2	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	2175	False	NA	NA	False	NA	NA	NA	58157045	58125360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
tx.205	chr1	-	4472	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-17	3	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	52.7071303326381	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTACAGGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	38168760	38091873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
tx.2050	chr10	+	2668	3	NIC	ENSMUSG00000019897.9	novel	1813	4	NA	NA	29	-2	intron_retention	FALSE	canonical	3	411	junction_2	58	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGTGTAATAGAAGCG	NA	False	NA	NA	False	NA	NA	NA	105676956	105683692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_105678710_105681210_105681311_105682877
tx.20500	chr9	-	4317	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	24	2	24	-2	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	2175	False	NA	NA	False	NA	NA	NA	58157045	58125360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
tx.20501	chr9	-	4328	9	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	24	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	115.161232083545	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTAACATTCTGATTG	2175	False	NA	NA	False	NA	NA	NA	58157045	58125367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156943
tx.20502	chr9	-	5009	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	3	178	junction_3	76.1389446268392	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2165	False	NA	NA	False	NA	NA	NA	58157055	58125823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
tx.20503	chr9	-	2395	8	FSM	ENSMUSG00000036986.17	ENSMUST00000153820.8	2652	8	14	243	14	-243	multi-exon	FALSE	canonical	3	249	junction_3	51.5692520316326	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGACCTTTGGCTGT	2165	False	NA	NA	False	NA	NA	NA	58157055	58128575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
tx.20504	chr9	+	1910	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	72	2	44	-2	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGAAGTGCAGCTGGC	NA	False	NA	NA	False	NA	NA	NA	58160518	58169801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
tx.20505	chr9	+	3444	6	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	45	-1	intron_retention	FALSE	canonical	3	282	junction_1	36.1861852092757	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGAAGTGCAGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	58160519	58169802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
tx.20506	chr9	-	2449	7	FSM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	-15	863	-15	-863	multi-exon	FALSE	canonical	2	7	junction_6	4.22952584681651	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTGTGCCCTGTGGT	9342	False	NA	NA	False	NA	NA	NA	58220484	58195883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
tx.20507	chr9	+	867	3	FSM	ENSMUSG00000097651.3	ENSMUST00000181967.3	843	3	-28	4	-28	-4	multi-exon	FALSE	canonical	3	39	junction_1	1.5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAACTGTGGCTGATACT	NA	False	NA	NA	False	NA	NA	NA	58362376	58376914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_58362640_58374083_58374201_58376427
tx.20509	chr9	+	1965	2	FSM	ENSMUSG00000066607.6	ENSMUST00000217624.2	1095	2	-870	0	-511	0	multi-exon	FALSE	canonical	3	17	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTATGTGCACATGGCC	NA	False	NA	NA	False	NA	NA	NA	58395374	58397768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_58396523_58396951
tx.2051	chr10	+	1080	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	405	328	-32	-328	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCTGGCAGCTGTACTA	NA	False	NA	NA	False	NA	NA	NA	105677332	105683366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
tx.20510	chr9	-	3372	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	231	0	231	0	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGCCTGTGATGCCT	333	False	NA	NA	False	NA	NA	NA	58462489	58431580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
tx.20511	chr9	+	2042	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	-17	-1	-17	1	multi-exon	FALSE	canonical	3	310	junction_5	36.1815151813233	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATAATACTCTTTAT	520	False	NA	NA	False	NA	NA	NA	58489557	58560162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
tx.20512	chr9	+	1926	8	FSM	ENSMUSG00000032336.18	ENSMUST00000176896.8	841	8	-170	-915	-21	-1	multi-exon	FALSE	canonical	3	20	junction_5	128.573492046933	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAATAATACTCTTT	516	False	NA	NA	False	NA	NA	NA	58489553	58560160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58550968_58557779_58557802_58558540_58558616_58559141
tx.20513	chr9	-	876	6	FSM	ENSMUSG00000074269.11	ENSMUST00000098674.6	883	6	-15	22	-15	0	multi-exon	FALSE	canonical	0	0	junction_3	244.73054570282	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCAATGTTTTATT	9035	False	NA	NA	False	NA	NA	NA	58648857	58560160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_58560390_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
tx.20514	chr9	-	784	5	NIC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	258.205828749081	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCAATGTTTTATT	9043	False	NA	NA	False	NA	NA	NA	58648849	58560160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_58560390_58565039_58565127_58567456_58567655_58619298_58619389_58648669
tx.20515	chr9	-	7148	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-20	-1714	-4	-154	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	NA	False	NA	NA	NA	58943728	58782123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
tx.20516	chr9	-	7082	28	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	2	-154	combination_of_known_junctions	FALSE	canonical	3	63	junction_21	18.8438096795025	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	NA	False	NA	NA	NA	58943722	58782123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
tx.20517	chr9	-	7191	28	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	3	-152	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	30.3143114055806	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACTGGTCTGGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	58943721	58782121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
tx.20518	chr9	+	2466	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	2	-4	2	0	multi-exon	FALSE	canonical	3	314	junction_6	118.522032644662	346	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	NA	False	NA	NA	NA	59198856	59223483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
tx.20519	chr9	+	2471	7	FSM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	14	-1	0	0	multi-exon	FALSE	canonical	3	305	junction_6	121.65205391699	354	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	NA	False	NA	NA	NA	59198854	59223483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
tx.2052	chr10	+	5741	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-93	-338	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	54.0733940775863	384	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAGCTAGTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	107997960	108115507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
tx.20520	chr9	-	2462	16	FSM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	56	0	-3	0	multi-exon	TRUE	canonical	3	108	junction_2	13.5581054068119	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATCACTGTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	59260735	59229272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
tx.20521	chr9	-	3762	3	ISM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	89889	1847	9069	-1847	3prime_fragment	FALSE	canonical	3	371	junction_2	41.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTACTTATGTTTATT	NA	False	NA	NA	False	NA	NA	NA	59304008	59297387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_59300662_59302160_59302274_59303633
tx.20522	chr9	-	5123	14	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-58	-1847	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	105.789620412318	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTACTTATGTTTATT	NA	False	NA	NA	False	NA	NA	NA	59393959	59297387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_59300662_59302160_59302274_59303633_59303832_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
tx.20523	chr9	-	5249	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	-1846	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_13	137.103509980524	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTACTTATGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	59393953	59297386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59375079_59375148_59393261
tx.20524	chr9	-	5176	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-56	1851	-52	-1851	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	620	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTACTTATGTT	NA	False	NA	NA	False	NA	NA	NA	59393953	59297391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
tx.20525	chr9	-	5108	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	-1851	combination_of_known_splicesites	FALSE	canonical	3	22	junction_12	108.59593173268	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTACTTATGTT	NA	False	NA	NA	False	NA	NA	NA	59393953	59297391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59393261
tx.20526	chr9	+	1848	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	146	2	146	-2	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	1353	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	59446968	59472390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
tx.20527	chr9	+	2580	23	FSM	ENSMUSG00000025237.17	ENSMUST00000216351.2	2484	23	-84	-12	-7	-1	multi-exon	FALSE	canonical	0	0	junction_10	14.9016056597828	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATATGATCACTGTGG	NA	False	NA	NA	False	NA	NA	NA	59524559	59557562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538053_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
tx.20528	chr9	+	2231	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	198	3	-7	-3	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	26178	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1862	False	NA	NA	False	NA	NA	NA	59563848	59586655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
tx.20529	chr9	-	4518	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	0	-948	0	754	multi-exon	FALSE	canonical	3	14	junction_2	2.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGTCTGTGTGTCAAA	6429	False	NA	NA	False	NA	NA	NA	59657921	59640787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_59645152_59647222_59647316_59657860
tx.2053	chr10	+	5573	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-93	-338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	67.5706547876351	52	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAGCTAGTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	107997960	108115507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
tx.20530	chr9	-	3780	3	FSM	ENSMUSG00000051705.14	ENSMUST00000177963.8	3792	3	11	1	0	-1	multi-exon	FALSE	canonical	2	5	junction_1	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTCTCTGTCTCCTC	6429	False	NA	NA	False	NA	NA	NA	59657921	59641542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_59645152_59657544_59657655_59657860
tx.20531	chr9	-	3659	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	19	4	-3	-4	multi-exon	FALSE	canonical	3	38	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGGTCTCTGTCTC	6437	False	NA	NA	False	NA	NA	NA	59657913	59641545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_59645152_59657860
tx.20532	chr9	+	12114	42	NIC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	17	-10	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	13.425716043437	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGCAATATGTGTGGT	572	False	NA	NA	False	NA	NA	NA	59658195	59836139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
tx.20533	chr9	+	6245	19	ISM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	119832	1667	-1043	-1667	3prime_fragment	FALSE	canonical	3	42	junction_5	12.1392384897534	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGGATTTTTTAATC	NA	False	NA	NA	False	NA	NA	NA	59778010	59834482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
tx.20534	chr9	-	2574	3	NNC	ENSMUSG00000110803.2	novel	1387	4	NA	NA	28	-105995	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATACAAAAAAAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	59848332	59839534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_59841973_59847284_59847361_59848272
tx.20535	chr9	-	8780	18	NIC	ENSMUSG00000032289.16	novel	8796	18	NA	NA	-6	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	5.36359637649641	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTAGTTAGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	60429335	59874221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381_60301830_60335446_60335809_60389705_60389779_60404380_60404489_60429148
tx.20536	chr9	-	2809	16	FSM	ENSMUSG00000047766.16	ENSMUST00000114034.9	2779	16	-30	0	10	0	multi-exon	FALSE	canonical	1	5	junction_10	6.23965811029205	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	3505	False	NA	NA	False	NA	NA	NA	60595431	60494511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60592317_60592406_60594421_60594479_60595094
tx.20537	chr9	+	4482	19	FSM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	-61	-4	-61	0	multi-exon	FALSE	canonical	3	92	junction_11	29.0464187886294	323	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACTTTTCTGAGATG	NA	False	NA	NA	False	NA	NA	NA	60701762	60787645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
tx.20538	chr9	+	2738	4	ISM	ENSMUSG00000034485.11	ENSMUST00000214997.2	4493	7	7540	1	3809	-1	3prime_fragment	FALSE	canonical	3	182	junction_1	5.8878405775519	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTACTTTTCTGAGAT	NA	False	NA	NA	False	NA	NA	NA	60777235	60787644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_60779566_60781314_60781468_60783643_60783710_60787455
tx.20539	chr9	+	5136	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	62.5752879870853	33	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	61279649	61325768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
tx.2054	chr13	+	205	1	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGGAAATTCTCAGGC	NA	False	NA	NA	False	NA	NA	NA	44539349	44539554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_44539300_44539600
tx.20540	chr9	+	5124	19	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	58.9194889051111	56	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	61279649	61325768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
tx.20541	chr9	+	5169	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	64.0147552435287	26	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	61279649	61325768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
tx.20542	chr9	+	5121	19	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	64.5875805055086	17	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	61279649	61325768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
tx.20543	chr9	+	5138	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.559921246038	136	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	61279650	61325768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
tx.20544	chr9	+	4356	18	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	57.9268121937869	8	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGATTGTTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	61280926	61325771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
tx.20545	chr9	+	4379	17	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	-264	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.2753148827848	4	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	61281346	61325768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
tx.20546	chr9	-	498	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	1	0	1	0	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	1243	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGACTGGTCTCACTTG	NA	False	NA	NA	False	NA	NA	NA	61821823	61820565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_61820804_61821169_61821245_61821638
tx.20547	chr9	-	4650	2	ISM	ENSMUSG00000032254.11	ENSMUST00000215319.2	569	4	-1902	-214	-1837	3	intron_retention	FALSE	canonical	3	321	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61830428	61824558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_61824962_61826181
tx.20548	chr9	-	3402	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	-1	-3	-1	3	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61854057	61824558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
tx.20549	chr9	-	3132	23	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	50	junction_16	70.2958329649162	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61854057	61824558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
tx.2055	chr10	+	2341	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	4	-600	4	600	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	938	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTAGGGTTGTTTTGTG	5602	False	NA	NA	False	NA	NA	NA	108167985	108250701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
tx.20550	chr9	-	3091	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	37.7146464629211	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61854058	61824558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
tx.20551	chr9	-	3455	24	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-12	3	combination_of_known_junctions	FALSE	canonical	3	50	junction_17	70.6780554601603	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61854068	61824558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
tx.20552	chr9	-	4908	5	FSM	ENSMUSG00000032252.15	ENSMUST00000185675.7	4850	5	-61	3	-16	-3	multi-exon	FALSE	canonical	3	145	junction_3	11.5974135047432	377	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTACTTGGATATTTCT	NA	False	NA	NA	False	NA	NA	NA	62029953	61964532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995802_62029766
tx.20553	chr9	+	2079	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	18	16	18	-16	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	358	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAATTTTTTGGGAGATG	NA	False	NA	NA	False	NA	NA	NA	62248628	62286078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
tx.20554	chr9	-	3269	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	12626	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	15.3332135580422	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTATCAAGCCATGTT	NA	False	NA	NA	False	NA	NA	NA	62405154	62326773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62405103
tx.20555	chr9	-	3548	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	64	-2	-20	2	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATCAAGCCATGTTTT	9422	False	NA	NA	False	NA	NA	NA	62444262	62326771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
tx.20556	chr9	-	3646	11	ISM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	68	4273	-16	1818	5prime_fragment	FALSE	canonical	3	53	junction_10	4.47325384926901	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGAAAGAAAAAGAAA	9426	False	NA	NA	False	NA	NA	NA	62444258	62331046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
tx.20557	chr9	-	6784	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	-2	3	-2	-3	multi-exon	FALSE	canonical	3	242	junction_1	0	286	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGAAGTTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	62719218	62699105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_62705011_62718339
tx.20558	chr9	+	2392	8	NIC	ENSMUSG00000032245.13	novel	2142	7	NA	NA	-147	-4	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	23.492942926482	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGGCCGTGGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	62745919	62759284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_62746237_62747766_62747874_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
tx.20559	chr9	+	2256	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	-117	3	-117	-3	multi-exon	FALSE	canonical	3	52	junction_1	5.87130498460285	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGGCCGTGGCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	62745949	62759285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
tx.2056	chr10	+	2232	6	ISM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	554	-602	-142	602	3prime_fragment	FALSE	canonical	3	675	junction_4	49.1634010214916	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTAGGGTTGTTTTGTGTC	6152	False	NA	NA	False	NA	NA	NA	108168535	108250703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
tx.20560	chr9	+	779	3	ISM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	10566	3	10536	-3	3prime_fragment	FALSE	canonical	3	41	junction_1	28	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGGAATTGGTGTTTC	3017	False	NA	NA	False	NA	NA	NA	62775951	62783200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_62776100_62778547_62778737_62782758
tx.20561	chr9	+	515	2	ISM	ENSMUSG00000032246.15	ENSMUST00000215968.2	526	4	13044	-70	13044	70	3prime_fragment	FALSE	canonical	3	97	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTAATAAGGTCTGTC	5525	False	NA	NA	False	NA	NA	NA	62778459	62782996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_62778737_62782758
tx.20562	chr9	-	3961	14	NNC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	32.0279094267565	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTCTGTAAAATGCT	NA	False	NA	NA	False	NA	NA	NA	62888164	62785647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_62787936_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
tx.20563	chr9	-	4570	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGTTCTGTAAAATG	NA	False	NA	NA	False	NA	NA	NA	62888165	62785649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
tx.20564	chr9	-	5082	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-6	488	-2	-369	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTTAAAGCAGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	62888167	62786137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
tx.20565	chr9	-	2234	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_19	18.5973116336744	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	63285177	63071050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
tx.20566	chr9	-	2300	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	10	0	10	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	63285174	63071049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
tx.20567	chr9	-	2478	19	ISM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	47	52479	22	24	5prime_fragment	FALSE	canonical	3	66	junction_16	8.30309328050043	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCCTCCTAGTGAAGT	NA	False	NA	NA	False	NA	NA	NA	63285137	63123528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
tx.20568	chr9	-	634	2	FSM	ENSMUSG00000032403.9	ENSMUST00000168665.3	595	2	-31	-8	-26	8	multi-exon	FALSE	canonical	3	56	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGAGTGTGTGGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	63306554	63301720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_63301958_63306157
tx.20569	chr9	+	2590	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	13	2691	13	1569	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	336	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	9227	False	NA	NA	False	NA	NA	NA	63509954	63549179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
tx.2057	chr10	+	5474	13	FSM	ENSMUSG00000020185.17	ENSMUST00000173471.8	3567	13	-45	-1862	0	-12	multi-exon	FALSE	canonical	0	0	junction_1	10.7480618407848	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTATGTTATATTACTT	NA	False	NA	NA	False	NA	NA	NA	110581328	110623233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_110581541_110582179_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
tx.20570	chr9	+	2587	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	13	1569	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	67.8911619914051	208	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	9227	False	NA	NA	False	NA	NA	NA	63509954	63549179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874_63546925_63547488
tx.20571	chr9	+	2495	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	9	1566	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	115.904174979928	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTAATGTGTTTTGTT	9223	False	NA	NA	False	NA	NA	NA	63509950	63549176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_63510054_63524063_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
tx.20572	chr9	-	5319	9	FSM	ENSMUSG00000032402.13	ENSMUST00000034973.10	5090	9	-229	0	-229	0	multi-exon	FALSE	canonical	3	17	junction_3	5.14174095030078	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTGCTGCTGTCTCTG	2054	False	NA	NA	False	NA	NA	NA	63665505	63554048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63664753
tx.20573	chr9	-	2981	4	FSM	ENSMUSG00000036867.8	ENSMUST00000041029.6	2971	4	-11	1	-11	-1	multi-exon	FALSE	canonical	3	34	junction_3	8.65383665716478	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTCTTTCTTACAA	NA	False	NA	NA	False	NA	NA	NA	63929352	63860358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486
tx.20574	chr9	-	4490	10	ISM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	15203	2	-2151	-2	intron_retention	FALSE	canonical	3	728	junction_4	159.423111232537	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	NA	False	NA	NA	NA	64065183	64044427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445
tx.20575	chr9	-	2764	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	193	0	2	0	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	460	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	NA	False	NA	NA	NA	64080193	64044425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
tx.20576	chr9	+	1392	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	-1	147	-1	-147	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	10196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	64080655	64085801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
tx.20577	chr9	+	749	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	28	451	28	-451	multi-exon	FALSE	canonical	3	413	junction_2	26	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTACAATATATAAATCAGT	1656	False	NA	NA	False	NA	NA	NA	64086583	64089963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_64086703_64087780_64087871_64089423
tx.20578	chr9	-	2412	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	10	14	10	-14	multi-exon	TRUE	canonical	3	469	junction_6	51.6454257412987	807	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACAAGAGATTTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	64160903	64093065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
tx.20579	chr9	+	1203	8	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	479	junction_1	696.204344855674	279	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9568	False	NA	NA	False	NA	NA	NA	64188887	64212076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
tx.2058	chr10	+	5469	13	FSM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	-7	11	-4	-11	multi-exon	TRUE	canonical	3	19	junction_6	6.98808509774554	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTATGTTATATTACTTG	NA	False	NA	NA	False	NA	NA	NA	110581321	110623234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
tx.20580	chr9	+	1213	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	539	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9564	False	NA	NA	False	NA	NA	NA	64188883	64212076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
tx.20581	chr9	+	1169	7	ISM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	6499	-2	6499	2	3prime_fragment	FALSE	canonical	3	2228	junction_5	165.980671565497	72	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	64195387	64212076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
tx.20582	chr9	-	3539	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	35	1	35	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGCTCAAATTGATTC	5122	False	NA	NA	False	NA	NA	NA	64248504	64214038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
tx.20583	chr9	+	4065	24	ISM	ENSMUSG00000036466.18	ENSMUST00000068967.11	6680	25	-57	8245	3	-15	5prime_fragment	FALSE	canonical	2	5	junction_22	6.82982450986398	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATCAATGTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	64292910	64608242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378
tx.20584	chr9	+	3827	25	NIC	ENSMUSG00000036466.18	novel	6680	25	NA	NA	28	-19	combination_of_known_junctions	FALSE	canonical	2	5	junction_22	7.12378157223317	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGGTATCAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	64292935	64608238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64607644
tx.20585	chr9	+	3467	25	FSM	ENSMUSG00000036466.18	ENSMUST00000068967.11	6680	25	-58	3271	2	1	multi-exon	FALSE	canonical	2	5	junction_22	6.84348838921594	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTCTCACATAACTTA	NA	False	NA	NA	False	NA	NA	NA	64292909	64613216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64613008
tx.20586	chr9	-	2326	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	2	8	2	-8	multi-exon	TRUE	canonical	3	899	junction_3	39.0160223497988	446	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCCAGTGTGGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	64645038	64622588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
tx.20587	chr9	+	8257	33	NIC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	-20	-17	intron_retention	FALSE	canonical	2	3	junction_2	6.19444055181741	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTAAGACTCTTACT	NA	False	NA	NA	False	NA	NA	NA	64718601	64826669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_64718869_64742567_64742635_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
tx.20588	chr9	+	8648	34	FSM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	-9	6	-9	-6	multi-exon	FALSE	canonical	3	9	junction_22	5.48643874485172	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCATGCTGATAATTATT	NA	False	NA	NA	False	NA	NA	NA	64718612	64826943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
tx.20589	chr9	+	2508	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-12	324	-12	-54	multi-exon	TRUE	canonical	3	115	junction_1	33.6860505254029	243	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGGTGTTTTGATCTAT	NA	False	NA	NA	False	NA	NA	NA	64868174	64893936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
tx.2059	chr10	+	885	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	389	110	-12	-2	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCTTTCAGAGGAGC	NA	False	NA	NA	False	NA	NA	NA	110756038	110775373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
tx.20590	chr9	+	2788	13	FSM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	-5	54	-5	-54	multi-exon	FALSE	canonical	3	19	junction_1	58.8451357377991	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGGTGTTTTGATCTAT	NA	False	NA	NA	False	NA	NA	NA	64868213	64893936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_64868540_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
tx.20591	chr9	+	2463	12	ISM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	756	54	4	-54	3prime_fragment	FALSE	canonical	3	207	junction_5	14.7036848139314	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGGTGTTTTGATCTAT	NA	False	NA	NA	False	NA	NA	NA	64868974	64893936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
tx.20592	chr9	-	2724	11	FSM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	-17	2	-17	-2	multi-exon	FALSE	canonical	3	252	junction_1	24.7620677650313	484	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTTGTGCTTAAACAT	NA	False	NA	NA	False	NA	NA	NA	64928992	64894266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
tx.20593	chr9	+	7055	20	NIC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	10	6	intron_retention	FALSE	canonical	3	89	junction_16	12.8524548459766	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCCCATGACTTATGT	NA	False	NA	NA	False	NA	NA	NA	64939705	64989939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
tx.20594	chr9	+	4800	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	12	-4	12	4	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCCCCCATGACTTAT	NA	False	NA	NA	False	NA	NA	NA	64939707	64989937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
tx.20595	chr9	+	7169	21	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_17	37.1957994940289	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTTCCCCCATGAC	NA	False	NA	NA	False	NA	NA	NA	64939714	64989933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64982354_64983017_64983171_64985244_64985388_64985955_64986068_64988012
tx.20596	chr9	+	4414	10	ISM	ENSMUSG00000032816.16	ENSMUST00000213533.2	6220	20	26858	-1	26809	1	3prime_fragment	TRUE	canonical	3	6	junction_3	2.94811092476036	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGCTCTCTCTCTTTT	2847	False	NA	NA	False	NA	NA	NA	65035625	65045223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
tx.20597	chr9	+	4429	14	FSM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	-89	-1157	-66	1157	multi-exon	FALSE	canonical	3	70	junction_11	14.1668000921899	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGAGGTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65048404	65094311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
tx.20598	chr9	+	4366	14	FSM	ENSMUSG00000032394.7	ENSMUST00000034961.6	3146	14	-61	-1159	-61	1159	multi-exon	FALSE	canonical	3	39	junction_11	21.5941587543412	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGAGGTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65048409	65094313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
tx.20599	chr9	+	3650	12	ISM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	36227	-1159	-3299	1159	3prime_fragment	FALSE	canonical	3	70	junction_9	15.3639053230896	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGAGGTTTTTTTTTTTT	2222	False	NA	NA	False	NA	NA	NA	65084720	65094313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
tx.206	chr1	-	4874	6	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-26	-5463	intron_retention	FALSE	canonical	3	163	junction_5	15.5769059828966	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAACTATAAAAAGTCTG	NA	False	NA	NA	False	NA	NA	NA	38168769	38123621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
tx.2060	chr10	+	1025	5	ISM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	12050	9	211	-9	3prime_fragment	FALSE	canonical	3	202	junction_1	3.56195171219375	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGTTCTTAAAAAGACAAT	NA	False	NA	NA	False	NA	NA	NA	110767699	110775474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
tx.20600	chr9	+	2502	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	27	junction_1	17.0269394392142	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTGACTG	NA	False	NA	NA	False	NA	NA	NA	65121951	65146500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
tx.20601	chr9	+	2361	7	NNC	ENSMUSG00000032392.12	novel	2518	6	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	22.6255754991264	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTGACTG	NA	False	NA	NA	False	NA	NA	NA	65122336	65146500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_65122390_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
tx.20602	chr9	+	2574	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	-62	6	-62	0	multi-exon	FALSE	canonical	3	51	junction_2	11.7915223783869	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTGACTG	NA	False	NA	NA	False	NA	NA	NA	65122364	65146500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
tx.20603	chr9	+	2465	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	23	397	-12	-397	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	447	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGATCCCATTGTTT	6174	False	NA	NA	False	NA	NA	NA	65201564	65237542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
tx.20604	chr9	+	2426	13	FSM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	-15	398	-15	-397	multi-exon	FALSE	canonical	3	55	junction_5	89.4905333292609	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGATCCCATTGTTT	6171	False	NA	NA	False	NA	NA	NA	65201561	65237542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
tx.20605	chr9	+	2404	5	FSM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	14	1	14	-1	multi-exon	FALSE	canonical	3	267	junction_1	28.3846349280733	479	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGCCCCTGATTTAT	NA	False	NA	NA	False	NA	NA	NA	65253399	65266924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65254291_65261891_65262031_65263526_65263764_65263999_65264088_65265875
tx.20606	chr9	+	3123	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-141	-2136	-141	-192	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	735	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	65278986	65287467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
tx.20607	chr9	+	2035	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	7	0	-7	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAAAAAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	65343063	65360329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
tx.20608	chr9	+	1668	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	-2	1014	-2	-1014	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	587	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	7174	False	NA	NA	False	NA	NA	NA	65368226	65394738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
tx.20609	chr9	-	3316	6	FSM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	-43	0	-43	0	multi-exon	FALSE	canonical	3	13	junction_5	5.23832034148352	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGGCCCAAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	65487365	65461665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471286_65480261_65480412_65487219
tx.2061	chr10	+	7161	23	FSM	ENSMUSG00000020189.16	ENSMUST00000095310.3	3622	23	-46	-3493	4	-2	multi-exon	FALSE	canonical	2	6	junction_2	18.6097370763154	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGATCCAGTGACTC	NA	False	NA	NA	False	NA	NA	NA	111000616	111133108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111001058_111040595_111040702_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
tx.20610	chr9	+	3381	13	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	35.8817502360183	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	65494474	65503246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
tx.20611	chr9	+	3688	12	FSM	ENSMUSG00000041064.15	ENSMUST00000047099.13	3685	12	-5	2	-5	1	multi-exon	FALSE	canonical	3	64	junction_6	26.5476337835245	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	NA	False	NA	NA	NA	65494481	65503247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
tx.20612	chr9	+	2701	11	ISM	ENSMUSG00000041064.15	ENSMUST00000131483.3	3309	13	1575	3	1570	0	3prime_fragment	FALSE	canonical	3	64	junction_5	27.7805687486776	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	65496077	65503246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
tx.20613	chr9	+	3923	2	NIC	ENSMUSG00000041064.15	novel	2450	4	NA	NA	1	744	intron_retention	FALSE	canonical	3	108	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494475	65498518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_65497110_65497229
tx.20614	chr9	+	1981	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	6	0	6	0	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	1408	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	65537846	65567808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
tx.20615	chr9	+	1812	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	365	junction_4	22.3983816379666	371	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGTCTGTCTTTTTAT	4634	False	NA	NA	False	NA	NA	NA	65583859	65597580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
tx.20616	chr9	-	7864	10	FSM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	-91	4	-91	-4	multi-exon	FALSE	canonical	2	5	junction_1	3.80058475033046	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATCTGTGAGGGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	65734937	65599676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_65602977_65603424_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
tx.20617	chr9	-	4337	13	NNC	ENSMUSG00000032386.16	novel	1999	13	NA	NA	8	303	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	57.9048549106396	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTAGTGTAAACCTAT	NA	False	NA	NA	False	NA	NA	NA	65792329	65738114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788367_65792209
tx.20618	chr9	-	3392	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	4	-1397	3	0	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	272	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	65792334	65739040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
tx.20619	chr9	-	3292	12	FSM	ENSMUSG00000032386.16	ENSMUST00000122410.8	3915	12	0	623	0	0	multi-exon	FALSE	canonical	3	24	junction_1	56.3782972135042	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	65792337	65739040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_65740731_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
tx.2062	chr10	+	7191	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	11	2	11	-2	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGATCCAGTGACTC	NA	False	NA	NA	False	NA	NA	NA	111000623	111133108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
tx.20620	chr9	+	965	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	79	1144	-4	-1144	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	172	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATCTCTTGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	65797597	65809404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
tx.20621	chr9	+	7265	15	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	5.25327885948483	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTACTTTTACTTCCT	NA	False	NA	NA	False	NA	NA	NA	65816261	65952283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_65816451_65828285_65828351_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
tx.20622	chr9	+	910	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	-18	0	-9	0	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	769	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTGGGCTGTGT	1556	False	NA	NA	False	NA	NA	NA	65967494	65973905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
tx.20623	chr9	+	3367	3	NIC	ENSMUSG00000032383.8	novel	892	5	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	2090	junction_2	109.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTTGGGTGTGGGCTG	1570	False	NA	NA	False	NA	NA	NA	65967508	65973902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_65970365_65972768_65972954_65973576
tx.20624	chr9	-	2011	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	57	5	-32	-5	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	507	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACAGGACTGGGCATGG	NA	False	NA	NA	False	NA	NA	NA	66032111	65995419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
tx.20625	chr9	+	1174	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	70	-4	70	4	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	406	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTTAGGTTTTTACT	1453	False	NA	NA	False	NA	NA	NA	66033962	66046241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
tx.20626	chr9	+	1781	12	FSM	ENSMUSG00000032380.10	ENSMUST00000034944.9	1772	12	-9	0	-9	0	multi-exon	TRUE	canonical	0	0	junction_2	2.90340353139478	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGGTGTTTTAGAGCT	4125	False	NA	NA	False	NA	NA	NA	66065495	66179524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_66065623_66072619_66072718_66127815_66128038_66138994_66139134_66153698_66153829_66157618_66157668_66158356_66158384_66161752_66161906_66162612_66162659_66175960_66176051_66176148_66176233_66178908
tx.20627	chr9	-	3916	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	95	1596	-11	1	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGGTTGAGTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	66500329	66423514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
tx.20628	chr9	-	3824	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	-30	-997	-30	4	multi-exon	FALSE	canonical	3	10	junction_8	36.8152271043594	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTGAGTGTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	66500348	66423511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
tx.20629	chr9	+	3670	10	FSM	ENSMUSG00000032373.16	ENSMUST00000085420.12	3639	10	-29	-2	15	-1	multi-exon	FALSE	canonical	2	4	junction_7	4.2687494916219	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGATTTTTTCCCCCCC	NA	False	NA	NA	False	NA	NA	NA	66620982	66674126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_66621216_66624841_66624863_66653751_66653932_66654857_66655004_66658211_66658308_66659224_66659289_66659568_66659727_66660976_66661104_66670528_66670617_66671569
tx.2063	chr10	+	2753	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	7	-16	7	16	multi-exon	FALSE	canonical	3	23	junction_1	0	5	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTGTGGTTGTCATT	NA	False	NA	NA	False	NA	NA	NA	111134546	111137604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111134769_111135073
tx.20630	chr9	-	3464	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	12	1729	12	-1729	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGCTTGTCATGCACA	NA	False	NA	NA	False	NA	NA	NA	66741996	66724004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
tx.20631	chr9	-	4745	8	FSM	ENSMUSG00000036943.10	ENSMUST00000041139.9	4733	8	-12	0	-12	0	multi-exon	FALSE	canonical	2	19	junction_5	12.9992150469455	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACTCTTAAGTGGATT	7739	False	NA	NA	False	NA	NA	NA	66826981	66750945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
tx.20632	chr9	+	491	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	10	-2	5	0	multi-exon	FALSE	canonical	3	10808	junction_3	618.277355956765	1567	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTCCCTCTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	66853377	66856796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
tx.20633	chr9	-	3654	4	ISM	ENSMUSG00000032370.9	ENSMUST00000215172.2	1806	5	-18	12551	-18	-12546	5prime_fragment	FALSE	canonical	3	65	junction_1	1.88561808316413	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATGACTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	66882720	66875220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_66878219_66878457_66878649_66881999_66882067_66882322
tx.20634	chr9	-	1732	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	-18	0	-18	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	NA	False	NA	NA	NA	66951207	66929871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.20635	chr9	-	1734	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	-125	-2	-20	0	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	NA	False	NA	NA	NA	66951209	66929871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.20636	chr9	-	2733	8	NIC	ENSMUSG00000032366.16	novel	1797	9	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	209	junction_4	194.584329339466	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTACTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	66951210	66935174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.20637	chr9	-	1168	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-194	-87	-20	5	multi-exon	FALSE	canonical	3	173	junction_1	167.222110903433	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTACTCCTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	66951209	66935242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.20638	chr9	-	2731	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	-22	-4	intron_retention	FALSE	canonical	3	256	junction_1	130.784134343269	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTCAGGGTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	66951211	66935177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.20639	chr9	-	1156	9	NIC	ENSMUSG00000032366.16	novel	1208	10	NA	NA	-21	-8	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	203.579683416592	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	66951210	66935255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.2064	chr10	+	2748	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	5	-9	5	9	multi-exon	FALSE	canonical	3	23	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTAATTGTCCTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	111134544	111137597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111134769_111135073
tx.20640	chr9	-	9750	39	ISM	ENSMUSG00000052698.16	ENSMUST00000215784.2	8330	59	193008	-3820	-15960	-2	3prime_fragment	TRUE	canonical	3	46	junction_38	14.6595954791457	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGTGTGAAGGTTTC	8254	False	NA	NA	False	NA	NA	NA	67253889	67124370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602
tx.20641	chr9	-	8712	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74347	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_58	17.1195697102182	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGCTGTTTCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	67541332	67127935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
tx.20642	chr9	+	1339	2	FSM	ENSMUSG00000091956.3	ENSMUST00000171652.3	1327	2	-11	-1	-11	1	multi-exon	FALSE	canonical	3	27	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGCAGCATTGATGTT	NA	False	NA	NA	False	NA	NA	NA	67666707	67668213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_67666799_67666965
tx.20643	chr9	+	4060	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	8	-48	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	33.650887391304	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTGTCATTTCA	4660	False	NA	NA	False	NA	NA	NA	69305195	69340356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_69305283_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
tx.20644	chr9	+	3858	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-4	combination_of_known_junctions	TRUE	canonical	2	11	junction_1	42.3416618300535	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTTTCTTGTTGTTCTT	4669	False	NA	NA	False	NA	NA	NA	69305204	69340400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_69305336_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
tx.20645	chr9	+	4017	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	33.0834597060593	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGCAATTTTCTTGTT	4652	False	NA	NA	False	NA	NA	NA	69305187	69340394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_69305336_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
tx.20646	chr9	+	4104	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	17	48	0	-48	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTGTCATTTCA	4669	False	NA	NA	False	NA	NA	NA	69305204	69340356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
tx.20647	chr9	+	1364	13	FSM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	76	7	-20	-7	multi-exon	FALSE	canonical	3	66	junction_7	12.0908022893437	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAATGCCGTTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	69360977	69399070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
tx.20648	chr9	+	2396	10	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_9	87.4795214131094	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTCTTAATTACCTTC	NA	False	NA	NA	False	NA	NA	NA	69896740	69915539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914324
tx.20649	chr9	+	2397	11	FSM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	7	60	7	2	multi-exon	FALSE	canonical	3	26	junction_9	104.017354321286	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTCTTAATTACCTTC	NA	False	NA	NA	False	NA	NA	NA	69896754	69915539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
tx.2065	chr10	+	1455	13	FSM	ENSMUSG00000058799.17	ENSMUST00000219143.2	1365	13	-94	4	-36	-4	multi-exon	TRUE	canonical	3	980	junction_10	384.309843167665	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACATTTTTTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	111309047	111330866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
tx.20650	chr9	+	2358	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	-28	-2	10	2	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTCTTAATTACCTTC	NA	False	NA	NA	False	NA	NA	NA	69896757	69915539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
tx.20651	chr9	+	747	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	18	128	0	0	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	NA	False	NA	NA	NA	69919849	69930020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
tx.20652	chr9	-	3590	10	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	154	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	89.1712182985043	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATGGGACTTTTAA	NA	False	NA	NA	False	NA	NA	NA	70048706	69995789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70037925_70037964_70048594
tx.20653	chr9	-	3666	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	37	0	37	0	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGGCATGGGACTTT	NA	False	NA	NA	False	NA	NA	NA	70048823	69995792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
tx.20654	chr9	-	3733	9	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	53	-797	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	70.8174369417589	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTCTTACTGTTGACC	NA	False	NA	NA	False	NA	NA	NA	70048807	69996589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70033360_70033468_70033566_70048594
tx.20655	chr9	+	4644	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	-19	0	-1	0	multi-exon	FALSE	canonical	3	179	junction_9	20.3906969292862	576	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	NA	False	NA	NA	NA	70114630	70307048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
tx.20656	chr9	-	1531	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	1	-1	1	1	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	1065	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTATCCTGTGTATATT	NA	False	NA	NA	False	NA	NA	NA	70328828	70314972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
tx.20657	chr9	-	4930	15	FSM	ENSMUSG00000032217.14	ENSMUST00000034739.12	4880	15	-45	-5	-45	0	multi-exon	TRUE	canonical	3	68	junction_2	86.8932021013645	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2201	False	NA	NA	False	NA	NA	NA	70411052	70332705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
tx.20658	chr9	-	4849	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-32	-2	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	79.8840876246409	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGTTTCATAATTAG	2214	False	NA	NA	False	NA	NA	NA	70411039	70332707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
tx.20659	chr9	-	4905	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-46	-2	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	71.3097941007676	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGTTTCATAATTAG	2200	False	NA	NA	False	NA	NA	NA	70411053	70332707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
tx.2066	chr10	+	1522	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	-36	0	-36	0	multi-exon	FALSE	canonical	3	684	junction_15	463.449884621364	311	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	NA	False	NA	NA	NA	111309047	111332745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
tx.20660	chr9	-	4831	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	-2	combination_of_known_junctions	FALSE	canonical	3	170	junction_8	55.2423386211279	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGTTTCATAATTAG	2211	False	NA	NA	False	NA	NA	NA	70411042	70332707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
tx.20661	chr9	-	4912	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	88.5629028154681	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTGTTTCATAAT	2211	False	NA	NA	False	NA	NA	NA	70411042	70332710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
tx.20662	chr9	-	4827	14	NIC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-35	2	combination_of_known_junctions	FALSE	canonical	3	148	junction_8	58.7438527565769	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTGTTTCATAATTA	2211	False	NA	NA	False	NA	NA	NA	70411042	70332708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
tx.20663	chr9	-	4890	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	2	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	73.562863579113	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTGTTTCATAATTA	2211	False	NA	NA	False	NA	NA	NA	70411042	70332708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
tx.20664	chr9	+	3338	20	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	70.7250930092244	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	NA	False	NA	NA	NA	70450040	70499519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
tx.20665	chr9	+	3807	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	-112	-4	4	2	multi-exon	FALSE	canonical	3	132	junction_6	54.986612006924	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATGTATTGAGAACCT	NA	False	NA	NA	False	NA	NA	NA	70450039	70499518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
tx.20666	chr9	+	3752	21	FSM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	5	-2	5	2	multi-exon	FALSE	canonical	3	66	junction_6	63.2220491600834	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATGTATTGAGAACCT	NA	False	NA	NA	False	NA	NA	NA	70450040	70499518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
tx.20667	chr9	-	8128	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	-50	3	-50	-3	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATTCTCTCTGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	70564506	70506298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
tx.20668	chr9	-	1018	2	ISM	ENSMUSG00000042444.11	ENSMUST00000214293.2	1779	5	-14	18582	-10	-18582	5prime_fragment	FALSE	canonical	3	20	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCTATTAGGTATTCT	NA	False	NA	NA	False	NA	NA	NA	70564443	70552099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_70552229_70563554
tx.20669	chr9	+	4633	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	-40	0	-40	0	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	478	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4910	False	NA	NA	False	NA	NA	NA	70586238	70687511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
tx.2067	chr10	+	3420	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-45	-2025	-26	-6	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	801	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	NA	NA	NA	111309057	111334005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
tx.20670	chr9	-	1062	5	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	118041	37	117846	7	3prime_fragment	FALSE	canonical	3	43	junction_2	8.95823643358446	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCTTTGCTGTTATAA	NA	False	NA	NA	False	NA	NA	NA	70724049	70705446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811
tx.20671	chr9	-	2174	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	1	25	1	9	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	3540	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATGGCGATGTGTTCT	2471	False	NA	NA	False	NA	NA	NA	71393216	71385743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
tx.20672	chr9	-	6709	19	FSM	ENSMUSG00000032232.15	ENSMUST00000072899.9	6754	19	47	-2	5	2	multi-exon	FALSE	canonical	1	2	junction_8	5.66666666666667	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCTTGTATTATTT	NA	False	NA	NA	False	NA	NA	NA	71678837	71533788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_71536675_71537757_71537922_71538143_71538253_71539012_71539138_71539879_71539964_71548640_71548731_71552773_71552936_71557503_71557675_71558515_71558669_71562574_71562680_71563327_71563535_71612429_71612643_71622604_71622741_71623689_71623839_71624677_71624780_71628877_71628984_71630815_71630911_71631759_71633365_71678790
tx.20673	chr9	-	4768	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	-54	1585	-30	0	multi-exon	FALSE	canonical	3	53	junction_7	13.3626344707921	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTAGTGAGTTTTTTA	9324	False	NA	NA	False	NA	NA	NA	72019183	71751554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
tx.20674	chr9	-	4696	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	-80	5	-30	0	multi-exon	FALSE	canonical	3	33	junction_6	15.470103416687	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTAGTGAGTTTTTTA	9324	False	NA	NA	False	NA	NA	NA	72019183	71751554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
tx.20675	chr9	+	4330	21	FSM	ENSMUSG00000038535.18	ENSMUST00000183410.8	4200	21	-120	-10	5	-6	multi-exon	FALSE	canonical	3	22	junction_19	12.0883208097734	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGATTCCTGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	72182165	72271053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
tx.20676	chr9	+	4365	22	FSM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	21	1	-6	-1	multi-exon	FALSE	canonical	3	36	junction_20	11.1161666503221	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTTGGCTAGCC	NA	False	NA	NA	False	NA	NA	NA	72182181	72271058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
tx.20677	chr9	+	4512	23	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.2417761386937	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTTGGCTAGCC	NA	False	NA	NA	False	NA	NA	NA	72182179	72271058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
tx.20678	chr9	+	5030	10	FSM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	-2	222	-2	-222	multi-exon	FALSE	canonical	3	40	junction_2	21.6834692682276	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTCTGTCTGTAGTGT	NA	False	NA	NA	False	NA	NA	NA	72345814	72369085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
tx.20679	chr9	+	872	3	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	13826	3445	13826	-3445	3prime_fragment	FALSE	canonical	3	85	junction_1	11.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTAGTCATTTTTATTT	1866	False	NA	NA	False	NA	NA	NA	72359642	72365862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_72360121_72364059_72364186_72365594
tx.2068	chr10	+	1348	14	FSM	ENSMUSG00000058799.17	ENSMUST00000219961.2	1512	14	-19	183	-15	2	multi-exon	FALSE	canonical	3	75	junction_13	616.19895158057	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGTTGGGAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	111309068	111331006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911
tx.20680	chr9	-	2659	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	132	3	-8	-3	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAGTTTGCTATTT	7868	False	NA	NA	False	NA	NA	NA	72399251	72367004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
tx.20681	chr9	-	4832	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	143	junction_10	32.0663374896479	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAAGTTTGCTATT	7868	False	NA	NA	False	NA	NA	NA	72399251	72367005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
tx.20682	chr9	-	1199	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-8	27	combination_of_known_splicesites	FALSE	canonical	3	37	junction_2	56.7235400869868	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTGGCCTGACTTCC	7868	False	NA	NA	False	NA	NA	NA	72399251	72368329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_72368561_72369137_72369273_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
tx.20683	chr9	-	1948	12	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-3	1	intron_retention	FALSE	canonical	3	21	junction_5	58.5026664646243	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	7873	False	NA	NA	False	NA	NA	NA	72399246	72368383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387205_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
tx.20684	chr9	+	1841	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-385	1	-16	-1	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTGATTACCTGGTTT	661	False	NA	NA	False	NA	NA	NA	72439505	72519704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
tx.20685	chr9	+	7755	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-41	-6	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTGGATGTTAAGAT	636	False	NA	NA	False	NA	NA	NA	72439480	72530105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
tx.20686	chr9	+	1999	7	FSM	ENSMUSG00000037674.16	ENSMUST00000184015.2	1554	7	-508	63	-13	0	multi-exon	FALSE	canonical	3	175	junction_3	16.2933183305987	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTGATTACCTGGTTTT	664	False	NA	NA	False	NA	NA	NA	72439508	72519705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
tx.20687	chr9	+	7885	9	FSM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	-11	6	-11	-6	multi-exon	FALSE	canonical	3	93	junction_7	49.9699909945959	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTGGATGTTAAGAT	666	False	NA	NA	False	NA	NA	NA	72439510	72530105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
tx.20688	chr9	+	5396	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	553.560943449088	1679	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGTGGCTCCGTTAC	NA	False	NA	NA	False	NA	NA	NA	72569716	72657129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_72569896_72577242_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
tx.20689	chr9	+	8993	20	FSM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	94	61	94	-61	multi-exon	FALSE	canonical	3	13	junction_7	6.01935934968244	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTGCTGTCTACATAT	NA	False	NA	NA	False	NA	NA	NA	72714249	72824512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72714815_72716736_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
tx.2069	chr10	+	3228	13	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	4882	6	4882	-6	3prime_fragment	FALSE	canonical	3	980	junction_8	383.532584085832	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	-22	True	NA	NA	NA	111321359	111334005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
tx.20690	chr9	+	1929	9	FSM	ENSMUSG00000092192.8	ENSMUST00000034734.9	1975	9	46	0	46	0	multi-exon	FALSE	canonical	3	12	junction_2	4.44233891097922	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCTGAAAACCTTATT	9224	False	NA	NA	False	NA	NA	NA	72866112	72880346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72866280_72867863_72868012_72868539_72868674_72869196_72869423_72871372_72871519_72872450_72872561_72876313_72876468_72879254_72879361_72879608
tx.20691	chr9	+	2965	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-26	0	-26	0	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	268	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGCTTTCTGATGTC	NA	False	NA	NA	False	NA	NA	NA	72892833	72921220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
tx.20692	chr9	+	2886	10	FSM	ENSMUSG00000034563.17	ENSMUST00000140675.8	2839	10	-45	-2	-18	0	multi-exon	FALSE	canonical	3	12	junction_9	64.8245495335079	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGAGTTGCCAATTACG	NA	False	NA	NA	False	NA	NA	NA	72892841	72923622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613_72922712_72923179
tx.20693	chr9	-	4192	10	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	26	352	intron_retention	FALSE	non_canonical	1	2	junction_4	16.3571255285137	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATAGTAACATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	72946907	72920640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
tx.20694	chr9	-	4484	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	46	-2337	-2	352	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATAGTAACATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	72946935	72920640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
tx.20695	chr9	-	4503	11	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	-27	350	intron_retention	FALSE	non_canonical	3	6	junction_5	16.9752761391384	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTATAGTAACATGGTT	NA	False	NA	NA	False	NA	NA	NA	72947008	72920642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
tx.20696	chr9	+	489	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	7	0	-5	0	multi-exon	FALSE	canonical	3	439	junction_1	0	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTTATTTATAAAGGT	NA	False	NA	NA	False	NA	NA	NA	72947006	72950061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72947148_72949713
tx.20697	chr9	+	3055	6	FSM	ENSMUSG00000032202.12	ENSMUST00000034722.5	2979	6	-41	-35	-38	-2	multi-exon	FALSE	canonical	2	4	junction_1	3.86781592116274	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTGGTGAATATTTCA	NA	False	NA	NA	False	NA	NA	NA	72952097	73004909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72952294_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
tx.20698	chr9	+	3019	6	NNC	ENSMUSG00000032202.12	novel	2979	6	NA	NA	20	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.08330601085553	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCAGTATATCAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	72952158	73004896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_72952332_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
tx.20699	chr9	+	1193	4	FSM	ENSMUSG00000092622.9	ENSMUST00000173734.9	1228	4	40	-5	40	5	multi-exon	FALSE	canonical	3	51	junction_3	87.8116671569837	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTATTTGAATGGA	NA	False	NA	NA	False	NA	NA	NA	73009719	73011725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_73009958_73010111_73010292_73010497_73011172_73011624
tx.207	chr1	-	3116	7	FSM	ENSMUSG00000026080.15	ENSMUST00000027249.13	2975	7	-146	5	-3	3	multi-exon	FALSE	canonical	2	9	junction_6	2.75378527364305	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTATCTGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	38937237	38902952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936970
tx.2070	chr10	+	1852	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	96	1	96	-1	multi-exon	FALSE	canonical	3	16	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTAAAGGTCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	111342242	111344505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111343510_111343920
tx.20700	chr9	+	1632	3	FSM	ENSMUSG00000092622.9	ENSMUST00000034737.13	1681	3	54	-5	54	5	multi-exon	FALSE	canonical	3	216	junction_2	18.5	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTATTTGAATGGA	NA	False	NA	NA	False	NA	NA	NA	73009733	73011725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_73009958_73010111_73010292_73010497
tx.20701	chr9	+	1541	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	2	0	2	0	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	613	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	8582	False	NA	NA	False	NA	NA	NA	73020731	73030615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
tx.20702	chr9	+	4138	13	FSM	ENSMUSG00000034858.17	ENSMUST00000170846.8	4355	13	-166	383	3	0	multi-exon	FALSE	canonical	2	6	junction_4	2.59673940848048	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGGTGTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	74860168	74939367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_74860561_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
tx.20703	chr9	+	3869	12	NIC	ENSMUSG00000034858.17	novel	4065	13	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	3.66804381851491	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGGTGTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	74860368	74939367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_74860561_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74932932_74933130_74938796
tx.20704	chr9	+	3899	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	61	3	-2	-3	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	840	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGCAGTTTTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	74944956	74967592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
tx.20705	chr9	+	4686	3	ISM	ENSMUSG00000007656.14	ENSMUST00000164467.8	1047	5	1	887	1	1	intron_retention	FALSE	canonical	3	3551	junction_1	1227.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	74944961	74964105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_74945002_74945188_74945244_74959514
tx.20706	chr9	+	4028	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	15	3	15	-3	multi-exon	FALSE	canonical	3	5814	junction_2	96	306	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGCAGTTTTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	74945014	74967592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_74945244_74959514_74959638_74963916
tx.20707	chr9	+	6570	41	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_31	15.7384084328753	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCAAGTAACTTCCTTC	2335	False	NA	NA	False	NA	NA	NA	74978471	75125768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
tx.20708	chr9	+	6499	40	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	18.337546584185	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCAAGTAACTTCCTTC	2325	False	NA	NA	False	NA	NA	NA	74978461	75125768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
tx.20709	chr9	+	7503	40	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-18	521	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	11.688258408137	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATCTTATTGAAGCCT	2315	False	NA	NA	False	NA	NA	NA	74978451	75126756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
tx.2071	chr10	+	2602	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	112	2309	1	-771	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	497	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTGTTTATGATGAAG	NA	False	NA	NA	False	NA	NA	NA	111808680	111822028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
tx.20710	chr9	+	6047	3	ISM	ENSMUSG00000034593.17	ENSMUST00000148144.8	1758	12	29148	-5695	21369	0	3prime_fragment	FALSE	canonical	3	79	junction_1	9	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTCTTTGTCTATAAAC	NA	False	NA	NA	False	NA	NA	NA	75122423	75130970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_75122542_75124780_75124862_75125122
tx.20711	chr9	+	6713	41	FSM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	14	0	14	0	multi-exon	FALSE	canonical	3	15	junction_20	11.0181384543851	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5142	False	NA	NA	False	NA	NA	NA	75139315	75212733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
tx.20712	chr9	+	1617	10	ISM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	26	47026	-6	59	5prime_fragment	FALSE	canonical	3	35	junction_4	9.15302014516399	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGGAGATTTCTTAGCCA	5154	False	NA	NA	False	NA	NA	NA	75139327	75165707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240
tx.20713	chr9	+	3205	12	FSM	ENSMUSG00000033590.9	ENSMUST00000215620.2	3189	12	-19	3	-19	-3	multi-exon	FALSE	canonical	3	30	junction_2	7.22140985754018	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGATGCACCATTTTT	1698	False	NA	NA	False	NA	NA	NA	75195093	75212730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
tx.20714	chr9	+	2098	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	11	-4	6	-1	multi-exon	TRUE	canonical	3	15	junction_6	3.38230690505755	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGGTATCTTGTCTTTA	386	False	NA	NA	False	NA	NA	NA	75221428	75253157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
tx.20715	chr9	-	3827	5	ISM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	10828	-116	-924	116	3prime_fragment	FALSE	canonical	3	287	junction_2	15.7003184681076	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCCTGTTTGACTCTTT	NA	False	NA	NA	False	NA	NA	NA	75305813	75294067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860
tx.20716	chr9	-	4199	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-9	-118	-9	116	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	612	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCCTGTTTGACTCTTT	NA	False	NA	NA	False	NA	NA	NA	75317296	75294067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
tx.20717	chr9	+	2177	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	3	0	3	0	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	595	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTATGCTTAAGAAAAC	929	False	NA	NA	False	NA	NA	NA	75348820	75373714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
tx.20718	chr9	+	2473	4	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	3.2659863237109	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	75375840	75393963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_75375966_75388729_75388947_75390380_75390480_75391931
tx.20719	chr9	-	3590	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	0	77	0	-77	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	828	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGATAGTCCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	75466939	75405065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
tx.2072	chr10	-	3130	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	35	587	35	-587	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	753	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTGTTTTCAGTTAC	NA	False	NA	NA	False	NA	NA	NA	115087337	115034363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
tx.20720	chr9	-	2389	10	FSM	ENSMUSG00000032186.16	ENSMUST00000098552.10	9871	10	129	7353	-4	615	multi-exon	TRUE	canonical	3	14	junction_9	3.42467444609388	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCAAAGTTTCTGATAC	NA	False	NA	NA	False	NA	NA	NA	75518456	75480255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
tx.20721	chr9	+	1213	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	-23	-1	-23	1	multi-exon	FALSE	canonical	3	61	junction_2	3	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCATTTCTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	75532999	75545054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_75533320_75542667_75543000_75544493
tx.20722	chr9	-	2042	12	FSM	ENSMUSG00000032181.8	ENSMUST00000213324.2	2152	12	121	-11	81	11	multi-exon	TRUE	canonical	0	0	junction_7	1.99171839092788	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCTGCTTTTAAAATAAGA	7956	False	NA	NA	False	NA	NA	NA	75591176	75550635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570489_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590219_75590273_75590916
tx.20723	chr9	-	6537	5	FSM	ENSMUSG00000032358.13	ENSMUST00000183437.8	3879	5	-63	-2595	-63	2595	multi-exon	FALSE	canonical	1	2	junction_4	1.87082869338697	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTTGAGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	76474461	76394740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_76400368_76409390_76409516_76410299_76410465_76452621_76453126_76474345
tx.20724	chr9	-	3139	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	-18	0	-18	0	multi-exon	TRUE	canonical	3	32	junction_5	6.66972316521396	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAGCTTTTTAAGAATT	NA	False	NA	NA	False	NA	NA	NA	77452170	77338104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
tx.20725	chr9	+	3418	16	FSM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	2	3	2	-3	multi-exon	FALSE	canonical	3	228	junction_1	20.3437131976114	475	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAGTACGTGTATGAG	4422	False	NA	NA	False	NA	NA	NA	77661818	77701764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
tx.20726	chr9	+	2760	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	19	3	19	-3	multi-exon	FALSE	canonical	3	515	junction_6	44.3764048354804	1025	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	77824664	77891798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
tx.20727	chr9	+	2739	14	FSM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	-31	-168	-31	168	multi-exon	FALSE	canonical	2	4	junction_1	29.6118879054586	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTATTGTGACAGGGT	NA	False	NA	NA	False	NA	NA	NA	78016442	78075388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
tx.20728	chr9	+	2423	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-28	4165	3	4	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTCATTATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	78020568	78075224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
tx.20729	chr9	+	1425	4	FSM	ENSMUSG00000097574.3	ENSMUST00000180974.2	1444	4	22	-3	22	3	multi-exon	FALSE	canonical	3	12	junction_1	0.471404520791032	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGGATTTCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	78083217	78086164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_78083318_78083852_78084025_78084280_78084376_78085106
tx.2073	chr10	-	3622	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	40	-587	intron_retention	FALSE	canonical	3	391	junction_15	43.9676648863179	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTGTTTTCAGTTAC	NA	False	NA	NA	False	NA	NA	NA	115087332	115034363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
tx.20730	chr9	+	910	7	FSM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	67	0	67	0	multi-exon	FALSE	canonical	3	2717	junction_1	326.320735201155	601	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	78099295	78116631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
tx.20731	chr9	-	859	7	FSM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	11	0	11	0	multi-exon	FALSE	canonical	3	15	junction_6	11.4260910006684	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	78254429	78238299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78254370
tx.20732	chr9	-	599	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	20	0	20	0	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	32274	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	NA	NA	NA	78275439	78274333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_78274577_78275002_78275186_78275266
tx.20733	chr9	+	2201	17	FSM	ENSMUSG00000070291.5	ENSMUST00000113367.2	2207	17	8	-2	8	2	multi-exon	FALSE	canonical	3	26	junction_4	22.7904002542737	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTGAAATTTTTTATG	9050	False	NA	NA	False	NA	NA	NA	78303066	78330871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
tx.20734	chr9	+	2117	16	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	19.8422668955832	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9050	False	NA	NA	False	NA	NA	NA	78303066	78330869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
tx.20735	chr9	+	962	5	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	24	-11675	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	25.5978514723404	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCAGTGGTGGCGCACG	9066	False	NA	NA	False	NA	NA	NA	78303082	78319194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873
tx.20736	chr9	+	2264	12	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	20.7332527258759	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGTTAGGTGATTTTA	NA	False	NA	NA	False	NA	NA	NA	78355492	78381432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368877_78372165_78372285_78377912_78378074_78381071
tx.20737	chr9	+	2361	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	3	2	-2	-2	multi-exon	FALSE	canonical	3	57	junction_9	10.2457409010559	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGTTAGGTGATTTTA	NA	False	NA	NA	False	NA	NA	NA	78355492	78381432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
tx.20738	chr9	+	172	2	Antisense	novelGene_ENSMUSG00000076138.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGCAGAGTTGACTGG	NA	False	NA	NA	False	NA	NA	NA	78383422	78418147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_+_78383568_78418120
tx.20739	chr9	-	1737	8	FSM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	53	4	53	-4	multi-exon	FALSE	canonical	3	9075	junction_7	2138.51814038008	8734	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	NA	False	NA	NA	NA	78388953	78385734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
tx.2074	chr10	-	4169	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-12	445	-9	-445	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	499	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATAGTTTGCTTTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	115151508	115123433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
tx.20740	chr9	-	3228	11	FSM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	9	-1	-5	1	multi-exon	FALSE	canonical	3	37	junction_3	5.61782876207526	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	78495314	78443768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792_78485990_78495155
tx.20741	chr9	+	5638	33	FSM	ENSMUSG00000046186.9	ENSMUST00000093812.5	5860	33	220	2	3	-2	multi-exon	FALSE	canonical	0	0	junction_8	1.55623744974859	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTGATTTAATTTTGC	2319	False	NA	NA	False	NA	NA	NA	78523047	78623533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_78523235_78524158_78524332_78541928_78541958_78543730_78543962_78549260_78549387_78561841_78561882_78564726_78564812_78567544_78567642_78568173_78568334_78568934_78569045_78571484_78571701_78572725_78572828_78572917_78572981_78574520_78574698_78576984_78577138_78579192_78579268_78579833_78579895_78587302_78587445_78588084_78588203_78592116_78592231_78596011_78596231_78596990_78597136_78598470_78598648_78603101_78603184_78605364_78605594_78607476_78607643_78610317_78610506_78610934_78611091_78612319_78612386_78614725_78614866_78617414_78617563_78619818_78619922_78622173
tx.20742	chr9	-	1861	2	Genic_Genomic	ENSMUSG00000059422.6	novel	1201	1	NA	NA	-77	687	multi-exon	FALSE	canonical	3	41	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTTGTCGTGTGA	NA	False	NA	NA	False	NA	NA	NA	78729197	78727232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr9_-_78728022_78728125
tx.20743	chr9	-	472	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	142	45	-26	0	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	585	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	79667018	79662687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
tx.20744	chr9	-	3568	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	92	-2	92	2	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	757	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGCTGTTTATGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	79700620	79676222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
tx.20745	chr9	+	4175	21	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	86.9113916584011	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGATATTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	79974188	80051455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
tx.20746	chr9	+	4195	22	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	64.7191035033447	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTGATATTCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	79974190	80051456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
tx.20747	chr9	+	4331	23	FSM	ENSMUSG00000034252.15	ENSMUST00000037484.15	5111	23	0	780	0	2	multi-exon	FALSE	canonical	0	0	junction_3	105.987768279143	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGATATTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	79974184	80051455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
tx.20748	chr9	+	4276	23	FSM	ENSMUSG00000034252.15	ENSMUST00000175999.8	4706	23	-180	610	16	0	multi-exon	FALSE	canonical	3	24	junction_2	83.8945126703669	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	79974200	80051453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
tx.20749	chr9	+	4352	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-588	-269	2	4	multi-exon	FALSE	canonical	0	0	junction_3	90.822246885334	359	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGATATTCTTTAGTG	NA	False	NA	NA	False	NA	NA	NA	79974186	80051457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
tx.2075	chr10	-	1851	8	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	63.4967458590901	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	115198142	115176643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_115177245_115178378_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
tx.20750	chr9	+	5582	33	NIC	ENSMUSG00000033577.19	novel	7927	35	NA	NA	-28	798	combination_of_known_junctions	TRUE	canonical	3	6	junction_28	17.6442437054553	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGATTGGTGTCTTTAT	4826	False	NA	NA	False	NA	NA	NA	80072284	80216682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80203924_80203964_80206427_80206532_80207816_80207949_80214241_80214461_80214953
tx.20751	chr9	+	5534	32	NIC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	-25	792	combination_of_known_junctions	FALSE	canonical	3	51	junction_13	8.67484072490656	123	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCACTTTTGATTGGTGT	4829	False	NA	NA	False	NA	NA	NA	80072287	80216676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
tx.20752	chr9	+	4669	5	FSM	ENSMUSG00000043289.13_ENSMUSG00000103536.2	ENSMUST00000057067.10	2670	5	26	-2025	-9	-132	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAAGTTCTGTGTTGCC	NA	False	NA	NA	False	NA	NA	NA	81745748	81911104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
tx.20753	chr9	+	1711	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	448	-1	182	1	multi-exon	TRUE	canonical	3	114	junction_3	13.589211407093	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGATGTTGATCTCTGT	NA	False	NA	NA	False	NA	NA	NA	82712040	82729741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
tx.20754	chr9	-	5889	3	ISM	ENSMUSG00000032253.14	ENSMUST00000190774.2	3830	17	20114	-3901	15930	-262	3prime_fragment	FALSE	canonical	3	58	junction_2	1	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTGTAGAGCCTCAT	NA	False	NA	NA	False	NA	NA	NA	82758311	82748473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_82753915_82757342_82757541_82758061
tx.20755	chr9	-	10464	40	FSM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	30	262	30	-262	multi-exon	FALSE	canonical	3	34	junction_28	10.5485322148115	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTGTAGAGCCTCAT	NA	False	NA	NA	False	NA	NA	NA	82857539	82748473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
tx.20756	chr9	-	836	6	FSM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	30	-4	30	4	multi-exon	FALSE	canonical	3	36	junction_1	6.24179461373089	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCACCTGTTTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	83028628	82991996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
tx.20757	chr9	-	3300	6	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.1821285987955	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	83323134	83275471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83322976
tx.20758	chr9	-	4101	8	NIC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	6.67618368317024	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	83323153	83275471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83323093
tx.20759	chr9	-	4229	8	FSM	ENSMUSG00000032258.16	ENSMUST00000034791.15	4160	8	-70	1	-4	-1	multi-exon	FALSE	canonical	3	4	junction_7	8.75051018920774	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGATCCTTTATTTGAA	NA	False	NA	NA	False	NA	NA	NA	83323150	83275472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83322961
tx.2076	chr10	-	3075	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	12	-3	-4	3	multi-exon	FALSE	canonical	3	189	junction_4	16.3291151015602	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	115198140	115176643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
tx.20760	chr9	+	4576	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-13	2	-12	-2	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	293	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTTTTATTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	83430367	83483397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
tx.20761	chr9	-	3034	6	FSM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	-37	4	-12	-4	multi-exon	FALSE	canonical	3	34	junction_4	3.49857113690718	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGTCCGTCGTTGA	NA	False	NA	NA	False	NA	NA	NA	83688342	83660748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_83662863_83665188_83665317_83667087_83667260_83670321_83670403_83672029_83672218_83687991
tx.20762	chr9	+	2913	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	-42	0	-13	0	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACAGTGGTCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	83716728	83754439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
tx.20763	chr9	+	2761	21	FSM	ENSMUSG00000038379.16	ENSMUST00000188445.7	2711	21	-32	-18	-32	18	multi-exon	FALSE	canonical	3	211	junction_10	27.9819584732735	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGAAATCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	83716709	83751564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235
tx.20764	chr9	+	2896	22	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	54.6264162422717	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACAGTGGTCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	83716748	83754439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735136_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
tx.20765	chr9	+	1484	11	FSM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	-7	0	-7	0	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	437	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	NA	NA	NA	83807190	84006292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
tx.20766	chr9	-	5448	28	ISM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	5274	-1	5254	1	3prime_fragment	FALSE	canonical	3	145	junction_19	27.3706961339808	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTAGCGTGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	85626113	85569411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427
tx.20767	chr9	-	5639	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	12	-1	-8	1	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTAGCGTGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	85631375	85569411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
tx.20768	chr9	+	2424	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	8	1049	8	-1049	multi-exon	FALSE	canonical	3	125	junction_1	0	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGTTTAACTTTG	NA	False	NA	NA	False	NA	NA	NA	85724925	85728044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_85725009_85725703
tx.20769	chr9	+	2422	2	NNC	ENSMUSG00000035274.14	novel	409	2	NA	NA	-40	-1051	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTTGTGTTTAACTT	NA	False	NA	NA	False	NA	NA	NA	85725373	85728042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_85725457_85725703
tx.2077	chr10	-	2981	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	34	-3	-2	3	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	115198138	115176643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
tx.20770	chr9	+	2489	2	FSM	ENSMUSG00000035274.14	ENSMUST00000185559.2	409	2	-14	-2066	-14	-1049	multi-exon	FALSE	canonical	3	15	junction_1	0	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGTTTAACTTTG	NA	False	NA	NA	False	NA	NA	NA	85725399	85728044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_85725548_85725703
tx.20771	chr9	-	1776	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	13	1	13	-1	multi-exon	TRUE	canonical	3	19	junction_5	4.12160822022031	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTCTTTTGTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	86346990	86189359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
tx.20772	chr9	-	2046	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	-5	625	-4	-1	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	488	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTTCGATTGCTTAC	NA	False	NA	NA	False	NA	NA	NA	86453885	86437054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
tx.20773	chr9	+	1235	3	FSM	ENSMUSG00000032417.11	ENSMUST00000185566.7	1054	3	-15	-166	-15	0	multi-exon	FALSE	canonical	3	38	junction_1	7	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTGTCTCAAGTCCAA	NA	False	NA	NA	False	NA	NA	NA	86454028	86456952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_86454111_86454889_86455117_86456026
tx.20774	chr9	-	3251	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	34	3	34	-3	multi-exon	TRUE	canonical	3	250	junction_5	30.9913139195733	570	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACCGTAAATGTCATTT	9644	False	NA	NA	False	NA	NA	NA	86577972	86463426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
tx.20775	chr9	+	3460	2	FSM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	-18	2	-18	-2	multi-exon	FALSE	canonical	3	21	junction_1	0	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTTACTGTGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	86625683	86640494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_86625860_86637210
tx.20776	chr9	+	2218	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	33	393	33	0	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	859	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	NA	False	NA	NA	NA	86904099	86959434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
tx.20777	chr9	-	4497	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	239	2949	-9	-2949	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCCATGACGTCAGAAGA	NA	False	NA	NA	False	NA	NA	NA	87137350	87074578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
tx.20778	chr9	-	3098	28	FSM	ENSMUSG00000032422.19	ENSMUST00000165315.9	3109	28	10	1	10	-1	multi-exon	TRUE	canonical	3	141	junction_13	28.9754164757839	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTGTATTTACTGTC	NA	False	NA	NA	False	NA	NA	NA	88320994	88258803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
tx.20779	chr9	-	5394	5	ISM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	19092	12	17588	-12	3prime_fragment	FALSE	canonical	3	723	junction_1	89.8926443041921	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTTAGGATCTCCAGG	NA	False	NA	NA	False	NA	NA	NA	88345209	88331795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007
tx.2078	chr10	-	2969	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	68.9365650435239	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	115198142	115176646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197969
tx.20780	chr9	-	4861	2	ISM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	25573	17	24069	-17	3prime_fragment	FALSE	canonical	3	723	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCATGTCTTAGGATCT	NA	False	NA	NA	False	NA	NA	NA	88338728	88331800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_88336349_88338415
tx.20781	chr9	-	4123	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	26	2108	26	598	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCTTTTTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	88364275	88333891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
tx.20782	chr9	-	6227	11	NIC	ENSMUSG00000032423.13	novel	3404	12	NA	NA	17	-10	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	321.482876682414	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTAGGATCTCCAGGAG	NA	False	NA	NA	False	NA	NA	NA	88364284	88331793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
tx.20783	chr9	-	4286	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	334	4830	23	598	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCTTTTTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	88364278	88333891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
tx.20784	chr9	-	4276	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174282.8	3404	12	-25	-847	-25	595	multi-exon	FALSE	canonical	3	172	junction_1	221.053263840518	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGGCTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	88364274	88333894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
tx.20785	chr9	-	2605	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	334	5	-25	-5	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGTGTTTACAATTC	NA	False	NA	NA	False	NA	NA	NA	88364274	88337635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
tx.20786	chr9	-	673	5	NIC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	461	junction_1	309.579553588411	148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	88404943	88403104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404640_88404903
tx.20787	chr9	+	3472	6	NIC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	12	junction_1	4.17612260356422	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTCAGTTTGAGTAGT	NA	False	NA	NA	False	NA	NA	NA	88430123	88453111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_88430562_88434714_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
tx.20788	chr9	+	3412	6	FSM	ENSMUSG00000032425.16	ENSMUST00000162827.8	3472	6	55	5	-10	-5	multi-exon	FALSE	canonical	3	7	junction_1	5.88557558782486	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACTTCAGTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	88430127	88453109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_88430562_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
tx.20789	chr9	-	4699	2	FSM	ENSMUSG00000079427.11	ENSMUST00000185519.7	1103	2	-3583	-13	20	9	multi-exon	TRUE	canonical	3	527	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAATTATTAGAATATTA	NA	False	NA	NA	False	NA	NA	NA	88601846	88570645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_88571039_88597540
tx.2079	chr10	-	2863	7	ISM	ENSMUSG00000069520.7	ENSMUST00000218731.2	1346	8	5	1065	-2	3	5prime_fragment	FALSE	canonical	3	28	junction_6	86.2470611415575	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	115198131	115176643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115197969
tx.20790	chr9	-	788	4	FSM	ENSMUSG00000079427.11	ENSMUST00000186863.7	725	4	24	-87	7	1	multi-exon	FALSE	canonical	3	43	junction_3	219.136182924378	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	88601616	88570657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_88571039_88597540_88597803_88598546_88598617_88601541
tx.20791	chr9	-	3720	3	ISM	ENSMUSG00000079427.11	ENSMUST00000186863.7	725	4	17	-87	0	1	intron_retention	FALSE	canonical	3	84	junction_2	221.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	88601623	88570657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_88571039_88597540_88597803_88598546
tx.20792	chr9	-	736	3	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	156	junction_2	185.5	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	88601634	88570657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_88571039_88597540_88597803_88601541
tx.20793	chr9	-	781	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	17	3	17	1	multi-exon	FALSE	canonical	3	319	junction_2	104	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	88601849	88570657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_88571039_88597540_88597803_88601711
tx.20794	chr9	+	2588	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	14.9059551857638	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTTGCTTAATTCACT	NA	False	NA	NA	False	NA	NA	NA	88948966	88959873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957243_88957340_88957565
tx.20795	chr9	+	779	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	17	20	17	-6	multi-exon	TRUE	canonical	3	175	junction_1	109	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	NA	NA	NA	89093226	89122273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_89093365_89097261_89097524_89121894
tx.20796	chr9	+	784	4	FSM	ENSMUSG00000066442.18	ENSMUST00000117314.8	705	4	-4	-75	-4	-1	multi-exon	FALSE	canonical	3	32	junction_1	167.420296127905	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGTATAAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	89093431	89122243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_89093535_89096464_89096535_89097261_89097524_89121894
tx.20797	chr9	+	725	3	NIC	ENSMUSG00000066442.18	novel	1406	4	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	155	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATTTAGAAATCAATAGAA	NA	False	NA	NA	False	NA	NA	NA	89093449	89122272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_89093535_89097261_89097524_89121894
tx.20798	chr9	+	3687	3	NIC	ENSMUSG00000066442.18	novel	705	4	NA	NA	27	-4	intron_retention	FALSE	canonical	3	44	junction_1	174.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	89093490	89122275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_89096535_89097261_89097524_89121894
tx.20799	chr9	-	1322	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	26	-2	26	2	multi-exon	FALSE	canonical	3	96	junction_1	7.5	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAGTGATGTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	89587095	89581256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_89582033_89584824_89585074_89586798
tx.208	chr1	+	1140	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2182	592	-51	0	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	454	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGTGCAAAAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	39026870	39035727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
tx.2080	chr10	-	2884	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	66.9842435867487	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	115198139	115176643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115197956
tx.20800	chr9	-	1716	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	102	6	-13	0	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	2171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	NA	NA	NA	89996725	89973723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
tx.20801	chr9	+	5226	25	FSM	ENSMUSG00000032363.16	ENSMUST00000147250.8	4833	25	-284	-109	-151	-1	multi-exon	FALSE	canonical	2	9	junction_18	7.86065713255295	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTTTGGCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	90044970	90082152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90075919_90076095_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
tx.20802	chr9	-	5936	13	FSM	ENSMUSG00000037410.14	ENSMUST00000041767.14	5956	13	-4	24	-2	-24	multi-exon	FALSE	canonical	3	55	junction_2	8.96714682729251	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTAGGTGTAGTCATT	NA	False	NA	NA	False	NA	NA	NA	90152826	90084103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
tx.20803	chr9	-	5898	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	12	-26	intron_retention	FALSE	canonical	0	0	junction_1	19.324999904315	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTAGGTGTAGTCA	NA	False	NA	NA	False	NA	NA	NA	90152845	90084105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
tx.20804	chr9	-	5857	13	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	0	-30	intron_retention	FALSE	canonical	0	0	junction_8	19.5254463599569	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCAAAAGGTAGGTGTA	NA	False	NA	NA	False	NA	NA	NA	90152822	90084109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108389_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
tx.20805	chr9	-	5589	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	-3	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9311141581848	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCTCAAAAGGTAGGT	NA	False	NA	NA	False	NA	NA	NA	90152860	90084112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152721
tx.20806	chr9	+	1528	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	473	301	-119	0	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	178	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGATGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	92132275	92154030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
tx.20807	chr9	+	3620	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	29	0	-12	0	multi-exon	TRUE	canonical	3	58	junction_10	9.44264688775947	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424304	92490481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
tx.20808	chr9	-	3973	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	-24	1	-24	-1	multi-exon	FALSE	canonical	3	138	junction_2	1.5	392	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGCTACTCTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	94420158	94399917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_94402700_94406444_94406749_94419271
tx.20809	chr9	-	3117	2	FSM	ENSMUSG00000033350.8	ENSMUST00000036267.8	7328	2	-594	4805	-594	-4805	multi-exon	FALSE	canonical	3	17	junction_1	0	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTATATTTGATTCC	NA	False	NA	NA	False	NA	NA	NA	95289369	95286149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_95288527_95288629
tx.2081	chr10	-	5080	5	ISM	ENSMUSG00000069520.7	ENSMUST00000219890.2	2949	7	22	0	-5	0	intron_retention	FALSE	canonical	3	189	junction_4	18.07449860992	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	115198107	115176646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558
tx.20810	chr9	-	4096	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	214.655189734862	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTCAGGCAATTTTAACA	8303	False	NA	NA	False	NA	NA	NA	95393937	95342449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382851_95384592_95384638_95393869
tx.20811	chr9	-	4117	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	0	-1006	0	579	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	1126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8302	False	NA	NA	False	NA	NA	NA	95393938	95342451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
tx.20812	chr9	-	3985	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	0	579	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	203.484137904403	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8302	False	NA	NA	False	NA	NA	NA	95393938	95342451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
tx.20813	chr9	+	1760	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	131	2547	131	866	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGCAGCCAGATAACCT	8506	False	NA	NA	False	NA	NA	NA	95519784	95577602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
tx.20814	chr9	+	1794	4	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	48281	2548	5576	865	3prime_fragment	FALSE	canonical	3	299	junction_3	11.1455023315337	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	3464	False	NA	NA	False	NA	NA	NA	95567934	95577601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_95568894_95574913_95574998_95576676_95576845_95577018
tx.20815	chr9	-	3693	16	FSM	ENSMUSG00000049493.14	ENSMUST00000093800.9	3704	16	8	3	8	-3	multi-exon	FALSE	canonical	3	26	junction_4	11.5231168623	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTGTTTATTTCATT	NA	False	NA	NA	False	NA	NA	NA	95727331	95634697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_95636491_95636713_95636839_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95727223
tx.20816	chr9	+	4544	24	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	0	-2784	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_23	22.001804359758	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTGAATCTATAACATAC	NA	False	NA	NA	False	NA	NA	NA	95739691	95783307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95783115
tx.20817	chr9	+	8003	47	FSM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	55	-2	2	2	multi-exon	TRUE	canonical	3	80	junction_14	23.1390654868948	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATCTGAAATCCA	NA	False	NA	NA	False	NA	NA	NA	95739704	95833699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
tx.20818	chr9	+	3524	27	ISM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	1	41156	1	6	5prime_fragment	FALSE	canonical	3	35	junction_24	7.47273149365955	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATTTCTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	95836813	95893924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576
tx.20819	chr9	+	10257	42	FSM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	-7	6	0	-6	multi-exon	FALSE	canonical	3	17	junction_40	10.3589359987776	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGACACTGCTGCTTTGC	NA	False	NA	NA	False	NA	NA	NA	95836812	95939850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
tx.2082	chr10	-	2920	7	NIC	ENSMUSG00000069520.7	novel	2799	7	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	71.1213751273132	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	115198412	115176643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115198291
tx.20820	chr9	+	7232	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	1	-4418	1	0	multi-exon	FALSE	canonical	3	48	junction_1	8.15843122174846	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCATATGCATATTT	NA	False	NA	NA	False	NA	NA	NA	96001415	96066661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
tx.20821	chr9	+	2831	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	121.307619140508	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTCAGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	96078319	96201036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20822	chr9	+	2768	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	9	40	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGACTGCATCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	96078336	96201074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20823	chr9	+	7512	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-2	-24	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	119.483326477473	49	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	96078325	96205675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20824	chr9	+	2819	13	FSM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	-23	4558	6	4	multi-exon	FALSE	canonical	3	58	junction_3	115.436009209528	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTATGGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	96078333	96201141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20825	chr9	+	2864	13	NNC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	139.700174978018	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTATGGCTGTGATTTC	NA	False	NA	NA	False	NA	NA	NA	96078327	96201144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20826	chr9	+	2780	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	-57	-1010	5	0	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	96078332	96201034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20827	chr9	+	2679	13	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.273029455764	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	96078327	96201033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20828	chr9	+	7299	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	12	-24	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	115.371408864896	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	96078339	96205675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20829	chr9	+	2806	15	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	128.768440327938	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTCAGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	96078347	96201036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.2083	chr10	-	5098	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	-124	-4	-116	4	multi-exon	FALSE	canonical	3	8	junction_1	6.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTCATCCCTGTTA	2244	False	NA	NA	False	NA	NA	NA	115220464	115204304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_115208852_115212256_115212453_115220109
tx.20830	chr9	+	2883	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	136.43434817137	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATACTGCAGTATGGC	NA	False	NA	NA	False	NA	NA	NA	96078347	96201135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20831	chr9	+	2995	16	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	141.147613826408	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTATGGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	96078347	96201141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20832	chr9	+	2859	14	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	131.410328955577	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	NA	False	NA	NA	NA	96078347	96201137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20833	chr9	+	7403	14	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_4	124.629201513219	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	NA	NA	NA	96078347	96205699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155918_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20834	chr9	+	5693	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	-1894	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	147.36144528185	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTCCGTTCACCTGCGA	NA	False	NA	NA	False	NA	NA	NA	96078348	96203805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96084374_96084449_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20835	chr9	+	7540	15	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	149.492338210604	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	NA	NA	NA	96078348	96205699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96131042_96131163_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20836	chr9	+	2612	12	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.720956553214	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTCAGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	96078349	96201036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.20837	chr9	-	3659	6	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	28	9	intron_retention	FALSE	canonical	3	621	junction_1	89.2443835767831	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGGAGTCTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	96246467	96214698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
tx.20838	chr9	-	1974	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	9	11	9	-11	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	704	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATTTAAAACTTGGAACA	NA	False	NA	NA	False	NA	NA	NA	96246486	96214718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
tx.20839	chr9	-	1168	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	60	4	-5	-4	multi-exon	FALSE	canonical	3	1085	junction_1	10	384	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATGCTCTTTATTTGG	3773	False	NA	NA	False	NA	NA	NA	96360668	96352993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_96353906_96356010_96356059_96360460
tx.2084	chr10	+	6957	35	FSM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_22	26.4839345439331	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATAGTGGGACTGTTTT	NA	False	NA	NA	False	NA	NA	NA	115220863	115268677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
tx.20840	chr9	-	5731	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	81	1	0	-1	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTCTTTGTGAGACCT	NA	False	NA	NA	False	NA	NA	NA	96513589	96421353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
tx.20841	chr9	-	2940	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	-31	-1	14	1	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTACAGCTTACGGTGT	NA	False	NA	NA	False	NA	NA	NA	96771513	96705395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
tx.20842	chr9	-	5391	4	NIC	ENSMUSG00000032449.14	novel	894	3	NA	NA	-709	-4	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	274.927061034175	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	NA	False	NA	NA	NA	96972906	96957621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543
tx.20843	chr9	-	4692	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	19	-6	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	430.738156395507	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	96993191	96957623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
tx.20844	chr9	-	4694	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	519	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	NA	False	NA	NA	NA	96993182	96957621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
tx.20845	chr9	-	4628	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	385.517410072992	107	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	NA	False	NA	NA	NA	96993182	96957621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96975129_96975231_96979155_96979234_96982127_96982293_96992963
tx.20846	chr9	-	7155	3	FSM	ENSMUSG00000032449.14	ENSMUST00000148995.8	532	3	-2989	-3634	1777	-4	multi-exon	FALSE	canonical	3	1282	junction_1	9	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	NA	False	NA	NA	NA	96970303	96957621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_96961293_96962245_96962536_96967109
tx.20847	chr9	-	4591	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	28	608	28	-4	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	591	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	NA	False	NA	NA	NA	96993182	96957621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
tx.20848	chr9	-	3962	2	ISM	ENSMUSG00000032449.14	ENSMUST00000035024.8	4043	3	3989	2	3989	-2	3prime_fragment	FALSE	canonical	3	1282	junction_1	0	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAAGATTTTATAATG	4066	False	NA	NA	False	NA	NA	NA	96962534	96957619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_96961293_96962245
tx.20849	chr9	+	2171	5	NIC	ENSMUSG00000032456.14	novel	2166	5	NA	NA	-20	-12	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	2.27760839478607	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGAAAAGTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	98178615	98293475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_98179034_98236074_98236218_98281508_98281693_98285586_98285667_98292129
tx.2085	chr10	+	9195	33	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	3253	1	intron_retention	FALSE	canonical	3	77	junction_21	26.9507471777222	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGGGACTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	115224116	115268678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607_115267671_115267800
tx.20850	chr9	+	716	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1909	27	1909	-27	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATGTGTTTTGGAGG	4794	False	NA	NA	False	NA	NA	NA	98306922	98328601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
tx.20851	chr9	+	3058	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	-12	4	-2	-4	multi-exon	TRUE	canonical	3	669	junction_10	53.4673910412871	1079	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACTCTTGAGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	98445771	98470431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
tx.20852	chr9	-	1203	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	-6	0	-6	0	multi-exon	FALSE	canonical	3	442	junction_2	42.1929484387994	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	False	NA	NA	False	NA	NA	NA	98483719	98470782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
tx.20853	chr9	-	3612	7	NIC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	515	junction_4	22.0661883130428	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTCTGTAATTCGTT	NA	False	NA	NA	False	NA	NA	NA	98483720	98470785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_98470980_98472087_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
tx.20854	chr9	+	1055	6	FSM	ENSMUSG00000032463.11	ENSMUST00000112911.9	803	6	18	-270	-9	-2	multi-exon	FALSE	canonical	3	19	junction_1	126.927695953247	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGGGTTTGGTTTCA	3563	False	NA	NA	False	NA	NA	NA	98868444	98884072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_98868566_98872967_98873025_98874153_98874287_98874565_98874795_98881019_98881070_98883607
tx.20855	chr9	+	1010	5	FSM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	7	2	6	-2	multi-exon	FALSE	canonical	3	266	junction_2	16.8430252627015	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGGGTTTGGTTTCA	3551	False	NA	NA	False	NA	NA	NA	98868432	98884072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_98868566_98874153_98874287_98874565_98874795_98881019_98881070_98883607
tx.20856	chr9	+	6565	4	NIC	ENSMUSG00000032463.11	novel	1019	5	NA	NA	9	1	intron_retention	FALSE	canonical	3	266	junction_1	19.4307888557196	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGGTTTGGTTTCATGT	3587	False	NA	NA	False	NA	NA	NA	98868468	98884075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_98874287_98874565_98874795_98881019_98881070_98883607
tx.20857	chr9	-	4609	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-106	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_20	50.0203470996248	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTGGGTGTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	99022246	98920455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99022043
tx.20858	chr9	-	4850	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-122	1750	-122	-3	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	330	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATGTGGGTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	99022262	98920456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
tx.20859	chr9	+	2608	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	-2	0	-2	0	multi-exon	FALSE	canonical	3	165	junction_10	72.0150887688172	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	NA	False	NA	NA	NA	99125492	99182457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
tx.2086	chr10	-	2967	15	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-348	0	intron_retention	FALSE	canonical	3	50	junction_13	166.140093331637	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	116417764	116321069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385011_116417357
tx.20860	chr9	+	1791	6	FSM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	-21	-2	-2	2	multi-exon	FALSE	canonical	3	228	junction_1	56.4361586219332	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCTTGGTCATCATGT	NA	False	NA	NA	False	NA	NA	NA	99125492	99146983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
tx.20861	chr9	+	2644	18	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	66	junction_1	83.1088001619555	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	NA	False	NA	NA	NA	99125500	99182457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
tx.20862	chr9	+	3403	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	165	junction_10	73.8784633282934	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	NA	False	NA	NA	NA	99125506	99182457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
tx.20863	chr9	-	4541	23	FSM	ENSMUSG00000037681.14	ENSMUST00000042158.13	4483	23	-59	1	-20	-1	multi-exon	TRUE	canonical	3	14	junction_20	5.80538365130531	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTGTATATTTCTAT	NA	False	NA	NA	False	NA	NA	NA	99240630	99192016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_99193731_99193998_99194049_99197239_99197346_99198698_99198831_99199258_99199358_99199940_99200441_99201555_99201706_99202307_99202395_99202886_99202956_99203434_99203498_99203579_99203643_99204150_99204241_99204649_99204699_99206210_99206294_99206949_99207121_99209951_99210073_99211808_99211865_99212753_99212844_99213411_99213479_99214858_99214936_99218117_99218253_99220820_99220863_99240103
tx.20864	chr9	-	4022	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	676	3	221	-3	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	478	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTGCCTTATTTCCTC	3915	False	NA	NA	False	NA	NA	NA	99318758	99267475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
tx.20865	chr9	-	3939	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-240	-3	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTGCCTTATTTCCTC	2310	False	NA	NA	False	NA	NA	NA	99302445	99267475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
tx.20866	chr9	-	4598	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	29	20	29	-20	multi-exon	TRUE	canonical	3	93	junction_7	54.8151294142266	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCAACTTCTTTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	99450923	99360444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
tx.20867	chr9	-	4521	21	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	29	-20	combination_of_known_junctions	FALSE	canonical	3	18	junction_20	65.4877660330538	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCAACTTCTTTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	99450923	99360444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
tx.20868	chr9	-	2971	11	FSM	ENSMUSG00000032468.12	ENSMUST00000186049.2	2761	11	-213	3	19	-3	multi-exon	FALSE	canonical	3	18	junction_10	66.7805360864975	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTTTTTATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	99450933	99400859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
tx.20869	chr9	-	3035	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-218	3	32	-3	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTTTTTATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	99450920	99400859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
tx.2087	chr10	-	2801	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	0	-1	0	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	352	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	116417405	116321069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
tx.20870	chr9	+	2202	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	14	45	14	-45	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAATTATTCAATGTTA	6420	False	NA	NA	False	NA	NA	NA	99457865	99466509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
tx.20871	chr9	+	4115	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.75407464324195	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTCGTTCTTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	99511571	99551308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
tx.20872	chr9	+	4922	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-20	812	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.26634360823522	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCTCGTGTTTGTCACA	NA	False	NA	NA	False	NA	NA	NA	99511574	99552121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
tx.20873	chr9	-	1779	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	12	2685	0	25	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATTGTAAATATCAAGTA	NA	False	NA	NA	False	NA	NA	NA	100428175	100377030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
tx.20874	chr9	+	6241	34	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	68.4680054375402	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	NA	False	NA	NA	NA	100479757	100840597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
tx.20875	chr9	+	5932	33	FSM	ENSMUSG00000037286.16	ENSMUST00000041418.13	5909	33	-23	0	-10	0	multi-exon	FALSE	canonical	3	20	junction_30	76.7811355310502	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	NA	False	NA	NA	NA	100525642	100840597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100836273_100836389_100838421_100838503_100838587
tx.20876	chr9	+	6038	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	146	2	-6	-1	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	551	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTGGTTATCCTGTT	NA	False	NA	NA	False	NA	NA	NA	100525646	100840596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
tx.20877	chr9	+	5927	33	NIC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	-3	-12	combination_of_known_splicesites	FALSE	canonical	3	23	junction_4	76.1785461822257	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAAAATCAGCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	100525649	100840585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
tx.20878	chr9	+	5828	32	NIC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	78.9085536143374	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTGTGGTTATCCTG	NA	False	NA	NA	False	NA	NA	NA	100525649	100840594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_100525850_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
tx.20879	chr9	-	2303	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	14	3	-3	-3	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTGGGTGTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	100916937	100864087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
tx.2088	chr10	-	2677	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	12	4	1	0	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	116417404	116321069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
tx.20880	chr9	+	5183	2	FSM	ENSMUSG00000066415.5	ENSMUST00000085177.5	4889	2	-698	404	-37	-404	multi-exon	FALSE	canonical	3	56	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTGTAGAATACTGAGG	NA	False	NA	NA	False	NA	NA	NA	100956116	100981595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_100957474_100977769
tx.20881	chr9	-	6796	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-35	25	-35	-25	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGACTGCGTTCACT	NA	False	NA	NA	False	NA	NA	NA	101129029	100982307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
tx.20882	chr9	-	5178	14	NNC	ENSMUSG00000043154.16	novel	2333	12	NA	NA	-31	957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.6997760303939	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTAGCTTTGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	101129025	101000486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_101001734_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
tx.20883	chr9	-	2103	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	-17	2094	-17	5	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGTTTATTACCACA	NA	False	NA	NA	False	NA	NA	NA	102503750	102463880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
tx.20884	chr9	+	3797	2	NIC	ENSMUSG00000035048.14	novel	595	3	NA	NA	-3	0	intron_retention	TRUE	canonical	3	1524	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	False	NA	NA	False	NA	NA	NA	102503519	102511441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_102507088_102511212
tx.20885	chr9	+	4205	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	121	2	121	-2	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	440	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	102594987	102610615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
tx.20886	chr9	+	4159	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.1808500241946	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	102595661	102610615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_102595730_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
tx.20887	chr9	+	4003	9	ISM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	2501	2	-118	-2	3prime_fragment	FALSE	canonical	3	197	junction_7	12.9204295594225	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	102597367	102610615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
tx.20888	chr9	+	2939	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	-93	6	-38	-6	multi-exon	TRUE	canonical	3	312	junction_7	39.7877019252155	346	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCTCACAGTGTG	NA	False	NA	NA	False	NA	NA	NA	102712077	102785146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
tx.20889	chr9	+	4550	14	FSM	ENSMUSG00000032548.15	ENSMUST00000035148.13	7122	14	-30	2602	-30	-2602	multi-exon	FALSE	canonical	2	4	junction_10	4.55472964402691	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTGTAAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	102885170	102965048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_102885915_102923883_102924022_102927342_102927506_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
tx.2089	chr10	-	3208	17	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-339	0	intron_retention	FALSE	canonical	3	100	junction_15	145.637593339598	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	116417755	116321070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
tx.20890	chr9	+	5032	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	-30	5	-10	-5	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTCCTTGTTGACTC	203	False	NA	NA	False	NA	NA	NA	102988975	103062470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
tx.20891	chr9	-	1851	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.1596624119289	146	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAAATGAT	NA	False	NA	NA	False	NA	NA	NA	103079327	103066288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_103066696_103066841_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
tx.20892	chr9	-	2348	17	FSM	ENSMUSG00000032554.16	ENSMUST00000035158.16	2571	17	142	81	-29	-81	multi-exon	FALSE	canonical	3	17	junction_12	9.88982273602515	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCCCAAACTCCATTCT	NA	False	NA	NA	False	NA	NA	NA	103107501	103086074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_103086278_103087693_103087878_103089010_103089196_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107372
tx.20893	chr9	+	5260	28	FSM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	-36	0	-36	0	multi-exon	FALSE	canonical	3	379	junction_13	76.5309229485215	798	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	917	False	NA	NA	False	NA	NA	NA	103182377	103227627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
tx.20894	chr9	+	3786	15	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	22224	0	-371	0	3prime_fragment	FALSE	canonical	3	480	junction_2	66.6094312130843	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	NA	False	NA	NA	False	NA	NA	NA	103204637	103227627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
tx.20895	chr9	-	3833	5	FSM	ENSMUSG00000032803.16	ENSMUST00000116517.9	3741	5	-92	0	-9	0	multi-exon	FALSE	canonical	3	39	junction_4	188.321533553654	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	NA	False	NA	NA	NA	103242188	103230302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103241661
tx.20896	chr9	-	3204	5	FSM	ENSMUSG00000032803.16	ENSMUST00000035484.11	3387	5	174	9	-47	1	multi-exon	FALSE	canonical	3	85	junction_1	174.534201519358	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGAATGTGATGCTTT	NA	False	NA	NA	False	NA	NA	NA	103242865	103230301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103242252
tx.20897	chr9	-	3923	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-132	-4	-51	0	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	533	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	NA	False	NA	NA	NA	103242869	103230302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
tx.20898	chr9	-	3734	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189066.2	2145	6	-101	-1488	-58	-1	multi-exon	FALSE	canonical	3	18	junction_4	9.53729521405309	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAAGTCGCTAATACAT	NA	False	NA	NA	False	NA	NA	NA	103639094	103360146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486992_103630053_103630167_103638953
tx.20899	chr9	-	2261	7	NNC	ENSMUSG00000042757.17	novel	2850	6	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	18.6785676348292	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGCACTGATTGCTTC	NA	False	NA	NA	False	NA	NA	NA	103639012	103361634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_103361983_103366387_103366543_103376000_103377408_103384221_103384315_103486909_103486996_103630053_103630167_103638953
tx.209	chr1	+	1100	5	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	5635	575	3378	17	3prime_fragment	FALSE	canonical	3	894	junction_3	53.7959106252511	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCAGCTTTCTAGTTA	NA	False	NA	NA	False	NA	NA	NA	39030323	39035744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
tx.2090	chr10	-	3079	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	-337	-622	-337	0	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	116417753	116321069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
tx.20900	chr9	-	3725	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189588.7	2850	6	-48	-827	-48	-4	multi-exon	FALSE	canonical	1	4	junction_4	14.324803663576	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGACCAAGTCGCTAATA	NA	False	NA	NA	False	NA	NA	NA	103639084	103360149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486996_103630053_103630167_103638953
tx.20901	chr9	+	5706	27	FSM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	182	11	-30	-11	multi-exon	TRUE	canonical	3	11	junction_1	5.77333187568024	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGAATTTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	103879926	103921006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
tx.20902	chr9	+	5665	28	NNC	ENSMUSG00000032558.20	novel	5899	27	NA	NA	-15	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	6.72953892191054	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATTTTGGCCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	103879941	103921011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150_103920388_103920418
tx.20903	chr9	+	3163	8	ISM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	32969	11	-333	-11	3prime_fragment	FALSE	canonical	3	24	junction_1	2.71052370871575	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGAATTTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	103912713	103921006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
tx.20904	chr9	-	1856	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	10	538	10	513	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGAAGCAGAATGTCT	NA	False	NA	NA	False	NA	NA	NA	103940323	103924335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
tx.20905	chr9	+	3364	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	4	76	4	-76	multi-exon	FALSE	canonical	3	30	junction_7	6.62112793865633	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTTATTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	103940888	104004848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
tx.20906	chr9	-	7706	56	FSM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	-11	317	-11	-317	multi-exon	FALSE	canonical	3	149	junction_37	31.3582656798217	236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTATGTTCTGTAATT	NA	False	NA	NA	False	NA	NA	NA	104140140	104028797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
tx.20907	chr9	-	4472	11	FSM	ENSMUSG00000032561.16	ENSMUST00000062723.14	4483	11	21	-10	0	10	multi-exon	TRUE	canonical	0	0	junction_6	1.79164728671689	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTAAGCCTGGGTTAC	NA	False	NA	NA	False	NA	NA	NA	104214906	104165439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_104168729_104178014_104178185_104184083_104184188_104186608_104186692_104191506_104191640_104193424_104193518_104197172_104197272_104201250_104201404_104201841_104201929_104204079_104204176_104214741
tx.20908	chr9	+	1519	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	29	2424	-2	-2	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	382	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGTTGTGAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	104930466	104954663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
tx.20909	chr9	+	5849	4	ISM	ENSMUSG00000032563.17	ENSMUST00000215577.2	1005	5	1457	22	1457	-4	3prime_fragment	FALSE	canonical	3	540	junction_1	15.2970585407784	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGGTTGTGAAACAG	NA	False	NA	NA	False	NA	NA	NA	104943460	104954661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_104948684_104950973_104951052_104952360_104952439_104954191
tx.2091	chr10	-	3145	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-346	0	intron_retention	FALSE	canonical	3	93	junction_16	168.781466973569	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	116417762	116321070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385011_116417357
tx.20910	chr9	-	1611	3	FSM	ENSMUSG00000032565.10	ENSMUST00000035179.9	1631	3	20	0	15	0	multi-exon	FALSE	canonical	3	25	junction_1	2	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTCTGGCTTCAATG	NA	False	NA	NA	False	NA	NA	NA	105009003	105006530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_105007710_105008491_105008762_105008841
tx.20911	chr9	+	2552	6	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-29	0	intron_retention	FALSE	canonical	3	20	junction_4	18.4932420089069	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	NA	NA	NA	105272561	105282666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
tx.20912	chr9	+	2492	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-29	292	-29	-1	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTGTATTTATTTATAT	NA	False	NA	NA	False	NA	NA	NA	105272561	105282665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
tx.20913	chr9	+	2682	5	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-29	0	intron_retention	FALSE	canonical	3	19	junction_1	18.0138835346518	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	NA	NA	NA	105272561	105282666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105280594_105280791_105282197
tx.20914	chr9	+	2397	6	FSM	ENSMUSG00000032567.17	ENSMUST00000123807.8	2349	6	-48	0	-25	0	multi-exon	FALSE	canonical	2	5	junction_2	22.5086649981735	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	NA	NA	NA	105272565	105282666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_105272865_105273743_105273905_105273996_105275058_105278674_105278886_105280594_105280791_105282197
tx.20915	chr9	+	2801	6	NIC	ENSMUSG00000032567.17	novel	1886	6	NA	NA	-25	64	intron_retention	FALSE	canonical	3	19	junction_1	19.6916225842362	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTTGTGAGAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	105272565	105282730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
tx.20916	chr9	-	4651	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_26	86.9224642592432	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	NA	False	NA	NA	NA	105372294	105288560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105372091
tx.20917	chr9	-	4900	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-31	7	-31	-2	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	689	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAATGACTTCCCAGTT	NA	False	NA	NA	False	NA	NA	NA	105372363	105288563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
tx.20918	chr9	-	4797	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-80	925	-41	0	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	NA	False	NA	NA	NA	105372373	105288561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
tx.20919	chr9	+	4514	20	NIC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	35.7025259626095	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	NA	False	NA	NA	NA	105520194	105564848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_105520227_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
tx.2092	chr10	-	2429	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	144.203246804255	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	116417445	116321070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
tx.20920	chr9	+	4875	20	FSM	ENSMUSG00000032571.15	ENSMUST00000065778.13	4711	20	-172	8	-10	0	multi-exon	FALSE	canonical	3	108	junction_1	21.4158146964708	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	NA	False	NA	NA	NA	105520196	105564848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
tx.20921	chr9	+	5669	19	NIC	ENSMUSG00000032571.15	novel	4756	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	118	junction_2	20.5297886550793	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	NA	False	NA	NA	NA	105520207	105564848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
tx.20922	chr9	-	4028	5	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-1995	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	3.53553390593274	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCACATGTGTCTTAC	3460	False	NA	NA	False	NA	NA	NA	106037332	106030059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687_106035104_106037295
tx.20924	chr9	+	3640	8	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	-19	-26	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	76.5447714792874	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGGATTTTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	106048107	106068312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
tx.20925	chr9	+	3729	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	-15	33	-15	-33	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	390	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCGTAAACAGGATTTT	NA	False	NA	NA	False	NA	NA	NA	106048111	106068305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
tx.20926	chr9	-	1827	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	17	2	17	-2	multi-exon	FALSE	canonical	3	106	junction_7	13.9682178931713	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTTCTCTCTCTTT	3860	False	NA	NA	False	NA	NA	NA	106076457	106072151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
tx.20927	chr9	+	1589	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	7	0	1	0	multi-exon	FALSE	canonical	3	299	junction_8	33.0111250186963	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	106080313	106092588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
tx.20928	chr9	+	1234	6	FSM	ENSMUSG00000023277.14	ENSMUST00000217523.2	819	6	-5	-410	-5	0	multi-exon	FALSE	canonical	3	299	junction_5	34.8906864363543	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	106089382	106092588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
tx.20929	chr9	-	2182	11	FSM	ENSMUSG00000032786.17	ENSMUST00000141118.9	3399	11	745	472	-39	-3	multi-exon	TRUE	canonical	3	139	junction_7	18.0612845611822	296	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATAGTCCTGGTTAGT	8523	False	NA	NA	False	NA	NA	NA	106125108	106111128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
tx.2093	chr10	-	2825	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	12	-993	12	0	multi-exon	TRUE	canonical	3	251	junction_7	35.031985384788	418	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGGTTGGGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	116786324	116741688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
tx.20930	chr9	+	2017	11	NIC	ENSMUSG00000023345.18	novel	2337	11	NA	NA	-30	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	88.6248272212702	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACTGCTTTGCCTGAT	9846	False	NA	NA	False	NA	NA	NA	106158548	106227717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207099_106207216_106226880
tx.20931	chr9	+	1421	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	284	632	-35	-1	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTGGGATTGGG	9841	False	NA	NA	False	NA	NA	NA	106158543	106227088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
tx.20932	chr9	+	3275	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	-62	0	-62	0	multi-exon	FALSE	canonical	3	135	junction_1	12	272	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCCTGGTGTTCAATA	NA	False	NA	NA	False	NA	NA	NA	106245768	106252923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106246523_106247899_106248335_106250837
tx.20933	chr9	+	761	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	-29	1	-29	0	multi-exon	FALSE	canonical	3	2142	junction_1	1217.38161642108	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCTGTTGTCATA	NA	False	NA	NA	False	NA	NA	NA	106306623	106308766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
tx.20934	chr9	+	859	4	FSM	ENSMUSG00000048758.15	ENSMUST00000217081.2	466	4	3	-396	3	0	multi-exon	FALSE	canonical	3	58	junction_1	2158.78427721613	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	NA	False	NA	NA	NA	106306763	106308767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106307013_106307168_106307214_106307506_106307572_106308267
tx.20935	chr9	+	1017	3	FSM	ENSMUSG00000048758.15	ENSMUST00000213448.2	845	3	8	-180	1	0	multi-exon	FALSE	canonical	3	3966	junction_1	565.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	NA	False	NA	NA	NA	106306761	106308767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106307214_106307506_106307572_106308267
tx.20936	chr9	-	1447	15	FSM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	73	9	-44	0	multi-exon	FALSE	canonical	3	198	junction_14	78.143510052117	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	NA	False	NA	NA	NA	106315445	106310188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
tx.20937	chr9	-	1441	15	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_14	59.3909565025326	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	NA	False	NA	NA	NA	106315443	106310188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
tx.20938	chr9	-	1236	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.56165113888	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	106324854	106317251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323029_106324729
tx.20939	chr9	-	1250	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	14	1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	104.893067242576	73	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	106324863	106317251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
tx.2094	chr10	-	1729	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	-31	992	20	1	multi-exon	FALSE	canonical	3	22	junction_7	97.8627156332334	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGTGTGTCTTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	116786316	116742680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
tx.20940	chr9	-	1301	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.893067242576	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGTGACGTTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	106324863	106317254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_106317604_106317819_106318110_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
tx.20941	chr9	+	1485	4	FSM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	260	0	-18	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTTTGCTGTCTCCGG	NA	False	NA	NA	False	NA	NA	NA	106325833	106330122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182
tx.20942	chr9	+	2037	13	FSM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	-5	3	-5	-3	multi-exon	FALSE	canonical	3	316	junction_11	32.902212016148	207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGTGCAGTAATACTA	1595	False	NA	NA	False	NA	NA	NA	106331035	106341208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
tx.20943	chr9	-	2311	11	FSM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	184	0	-23	0	multi-exon	FALSE	canonical	0	0	junction_10	2.9	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTGTCCGACTGAAT	NA	False	NA	NA	False	NA	NA	NA	106353391	106347825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997_106353182_106353280
tx.20944	chr9	+	1563	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	21	2	21	0	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	1371	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	NA	False	NA	NA	NA	106354488	106362621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
tx.20945	chr9	-	1602	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	-240	2	-3	-2	multi-exon	TRUE	canonical	3	151	junction_5	120.179865202121	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGAGTTGGTTTTTGTC	7873	False	NA	NA	False	NA	NA	NA	106563121	106535946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
tx.20946	chr9	-	1415	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	-20	-4	-8	-2	multi-exon	FALSE	canonical	3	285	junction_5	67.9187750183997	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGAGTTGGTTTTTGTC	7860	False	NA	NA	False	NA	NA	NA	106563134	106535946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
tx.20947	chr9	-	1994	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	-100	2	-4	-2	multi-exon	FALSE	canonical	3	46	junction_5	161.744242555956	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGAGTTGGTTTTTGTC	7872	False	NA	NA	False	NA	NA	NA	106563122	106535946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
tx.20948	chr9	-	9306	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	-1	0	-1	0	multi-exon	TRUE	canonical	3	17	junction_10	7.57277616039918	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTTGGTCAAGAAAT	7294	False	NA	NA	False	NA	NA	NA	106666394	106565280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
tx.20949	chr9	+	5681	24	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	59	-7	combination_of_known_junctions	FALSE	canonical	3	304	junction_23	40.0622389135641	252	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	106699131	106758184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
tx.2095	chr10	-	1956	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	3	0	3	0	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	2583	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	NA	False	NA	NA	NA	116899716	116886905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
tx.20950	chr9	+	5669	24	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	68	-7	combination_of_known_junctions	FALSE	canonical	3	78	junction_23	71.1541365847348	74	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	106699140	106758184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135
tx.20951	chr9	+	3263	11	ISM	ENSMUSG00000040325.17	ENSMUST00000055009.15	4967	23	29037	-547	7220	-7	3prime_fragment	FALSE	canonical	3	304	junction_10	48.4958761133357	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	106735304	106758184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
tx.20952	chr9	-	864	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	40	1343	-22	-5	multi-exon	FALSE	canonical	3	771	junction_3	24.1660919471891	275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTGGCACAGTATTC	NA	False	NA	NA	False	NA	NA	NA	106769138	106765956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
tx.20953	chr9	-	1797	3	FSM	ENSMUSG00000032575.17	ENSMUST00000160978.3	502	3	-23	-1272	-21	-6	multi-exon	FALSE	canonical	3	771	junction_2	24	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCTGGCACAGTATT	NA	False	NA	NA	False	NA	NA	NA	106769137	106765957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106767502_106768269_106768398_106769012
tx.20954	chr9	-	2697	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-20	-2	at_least_one_novel_splicesite	TRUE	canonical	3	142	junction_1	26.8365114556165	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCTGGGTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	107166998	107132127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_107132548_107132586_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
tx.20955	chr9	-	2782	11	FSM	ENSMUSG00000032577.17	ENSMUST00000035194.8	2816	11	30	4	30	4	multi-exon	FALSE	canonical	3	157	junction_10	23.3752005338992	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATTCCTGGGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	107167046	107132129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
tx.20956	chr9	-	1573	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	619	0	7	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGCCAGTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	107215549	107204901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
tx.20957	chr9	+	5590	38	NIC	ENSMUSG00000010066.16	novel	5807	39	NA	NA	-74	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	2.18568287774657	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACCAGTTTCTATCCAC	NA	False	NA	NA	False	NA	NA	NA	107277004	107406540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107277483_107303251_107303334_107342751_107342869_107374658_107374719_107383146_107383192_107386393_107386536_107389199_107389332_107389501_107389560_107390252_107390304_107390431_107390532_107390671_107390831_107391033_107391142_107391243_107391323_107391830_107391881_107392058_107392149_107392349_107392422_107392617_107392693_107394293_107394369_107394449_107394522_107394611_107394684_107394789_107394852_107395391_107395469_107399321_107399383_107401293_107401392_107401596_107401688_107401810_107401874_107402029_107402134_107402355_107402455_107402542_107402632_107402811_107402860_107403099_107403172_107403261_107403415_107403541_107403595_107403683_107403740_107403886_107404014_107404135_107404246_107404346_107404436_107404519
tx.20958	chr9	+	2090	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	83	21	83	-21	multi-exon	FALSE	canonical	3	142	junction_1	0	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTGGGCTCCGTCAG	NA	False	NA	NA	False	NA	NA	NA	107411226	107415851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107412529_107415063
tx.20959	chr9	-	1145	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	32	-15	32	15	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCAGAGTTGAGGATGGT	NA	False	NA	NA	False	NA	NA	NA	107419360	107416758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
tx.2096	chr10	-	6430	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	-10	0	-10	0	multi-exon	FALSE	canonical	3	66	junction_1	21.0226215606891	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTAAAGTTTTACTGTAT	NA	False	NA	NA	False	NA	NA	NA	116984425	116905331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
tx.20960	chr9	+	1441	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	11.6721891691319	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTACTGCTTCAGCC	NA	False	NA	NA	False	NA	NA	NA	107419424	107422905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
tx.20961	chr9	+	4210	4	FSM	ENSMUSG00000010067.14	ENSMUST00000144129.2	2094	4	-2119	3	41	-3	multi-exon	FALSE	canonical	3	50	junction_3	6.53197264742181	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTTTGGACTCTAT	NA	False	NA	NA	False	NA	NA	NA	107431822	107439459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107434757_107434968_107435267_107435385_107435502_107438597
tx.20962	chr9	+	1684	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	43	0	43	0	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	False	NA	NA	False	NA	NA	NA	107431824	107439462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
tx.20963	chr9	+	1663	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	2	0	2	0	multi-exon	FALSE	canonical	3	242	junction_1	4.5	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGAGTGGCGTCCAGTG	NA	False	NA	NA	False	NA	NA	NA	107440455	107443311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107440732_107441774_107441896_107442045
tx.20964	chr9	+	1887	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	4	2	4	2	multi-exon	FALSE	canonical	3	208	junction_3	7.31816613336672	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTTCTTGTCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	107446319	107449973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
tx.20965	chr9	+	2753	3	NIC	ENSMUSG00000010047.13	novel	1893	4	NA	NA	5	-1	intron_retention	FALSE	canonical	3	208	junction_2	7.5	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGCTTCTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	107446320	107449970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107448270_107448690_107448781_107449256
tx.20966	chr9	+	2058	4	NIC	ENSMUSG00000010047.13	novel	1893	4	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	100.360461448831	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGCTTCTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	107446341	107449970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107446629_107447302_107448270_107448690_107448781_107449256
tx.20967	chr9	+	4206	5	NIC	ENSMUSG00000010051.16	novel	3014	4	NA	NA	-3	2338	intron_retention	FALSE	canonical	3	8	junction_4	12.3970762682174	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTGG	NA	False	NA	NA	False	NA	NA	NA	107454153	107461247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298_107458135_107460015
tx.20968	chr9	+	3768	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	-11	-743	9	11	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454145	107458920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
tx.20969	chr9	+	3110	3	ISM	ENSMUSG00000010051.16	ENSMUST00000112387.9	2706	5	1152	-11	1089	11	intron_retention	FALSE	canonical	3	13	junction_2	11.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107455277	107458920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_107455676_107456079_107456170_107456298
tx.2097	chr10	-	1391	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	16	-80	-1	79	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	223	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGTGCTTTGATCAT	3387	False	NA	NA	False	NA	NA	NA	117060396	117051046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
tx.20970	chr9	+	1504	2	FSM	ENSMUSG00000079334.9	ENSMUST00000093785.6	2053	2	547	2	547	-2	multi-exon	FALSE	canonical	3	8	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTGG	NA	False	NA	NA	False	NA	NA	NA	107457862	107461247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107458135_107460015
tx.20971	chr9	+	2078	11	ISM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	81	0	-3	0	intron_retention	FALSE	canonical	3	651	junction_3	29.3468908063529	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	NA	False	NA	NA	NA	107464921	107470237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474
tx.20972	chr9	+	1975	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	81	0	-3	0	multi-exon	TRUE	canonical	3	631	junction_11	35.5716016363504	884	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	NA	False	NA	NA	NA	107464921	107470237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
tx.20973	chr9	-	3196	19	ISM	ENSMUSG00000057969.16	ENSMUST00000102530.8	3410	21	2478	-137	-38	1	3prime_fragment	TRUE	canonical	0	0	junction_18	15.5384826944089	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGCTGGTTCCAGTGAGC	6839	False	NA	NA	False	NA	NA	NA	107483920	107475414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483748
tx.20974	chr9	-	2898	17	ISM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	231	-138	98	0	3prime_fragment	FALSE	canonical	3	40	junction_12	7.52054477747457	37	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGCTGGTTCCAGTGAG	8389	False	NA	NA	False	NA	NA	NA	107482370	107475415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
tx.20975	chr9	-	2223	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	-13	5	-13	-5	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	1733	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTCCGTGTTCTTTT	4757	False	NA	NA	False	NA	NA	NA	107512579	107491328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
tx.20976	chr9	-	3916	19	NIC	ENSMUSG00000034684.13	novel	2383	18	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	4.82438507563655	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTGGTTTCTCTCCTT	9854	False	NA	NA	False	NA	NA	NA	107587198	107558700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
tx.20977	chr9	-	3083	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	-3	125	-3	0	multi-exon	FALSE	canonical	3	262	junction_19	112.690456068333	479	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	9702	False	NA	NA	False	NA	NA	NA	107648198	107617694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
tx.20978	chr9	-	3411	19	ISM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	19437	2	-1951	-2	3prime_fragment	FALSE	canonical	3	211	junction_18	55.8402980730663	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	107730583	107650763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323
tx.20979	chr9	-	4043	22	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	113.526006690147	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7564	False	NA	NA	False	NA	NA	NA	107749969	107650761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107738821_107738929_107749847
tx.2098	chr10	-	5912	6	ISM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	14807	-2	1070	2	3prime_fragment	FALSE	canonical	3	507	junction_5	43.4207323752145	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTGCAGTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	117198068	117180575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918
tx.20980	chr9	-	2171	17	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_15	79.7133291473264	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7545	False	NA	NA	False	NA	NA	NA	107749988	107650761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
tx.20981	chr9	-	3683	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	33	0	-13	0	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7546	False	NA	NA	False	NA	NA	NA	107749987	107650761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
tx.20982	chr9	-	3954	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	41	4	-13	0	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7546	False	NA	NA	False	NA	NA	NA	107749987	107650761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
tx.20983	chr9	-	3826	21	NNC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_19	89.637310869972	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7540	False	NA	NA	False	NA	NA	NA	107749993	107650761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730740_107737547_107737659_107749847
tx.20984	chr9	+	3522	3	ISM	ENSMUSG00000032583.8	ENSMUST00000191906.6	2821	4	-23	1	-23	-1	intron_retention	FALSE	canonical	3	19	junction_2	7.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTGCCCTTTGTCATTG	NA	False	NA	NA	False	NA	NA	NA	107765326	107780332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_107765602_107775870_107776011_107777225
tx.20985	chr9	+	2088	6	FSM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	-53	7	-22	-2	multi-exon	FALSE	canonical	3	19	junction_2	6.62117814289874	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGCCCTTTGTCATT	NA	False	NA	NA	False	NA	NA	NA	107765327	107780331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107765602_107775870_107776011_107777225_107777715_107778393_107779160_107779814_107779963_107780060
tx.20986	chr9	+	3422	9	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	40	junction_4	5.62222153601225	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	107813090	107826882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
tx.20987	chr9	+	3050	11	FSM	ENSMUSG00000032936.14	ENSMUST00000035700.14	3277	11	219	8	-5	0	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	107813091	107826882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
tx.20988	chr9	+	3918	10	FSM	ENSMUSG00000032586.10_ENSMUSG00000032936.14	ENSMUST00000192318.2	3253	10	-17	-648	-17	634	multi-exon	FALSE	canonical	3	36	junction_5	6.48264539813992	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGGTCTTTGAAGCAT	NA	False	NA	NA	False	NA	NA	NA	107813079	107827524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
tx.20989	chr9	+	1955	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	11	740	0	5	multi-exon	TRUE	canonical	3	256	junction_7	39.1366001255571	265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGCTGTATAAATTT	NA	False	NA	NA	False	NA	NA	NA	107828165	107848729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
tx.2099	chr10	-	5289	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-39	-3023	2	-1346	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTCAACCAAAAATTATGA	4476	False	NA	NA	False	NA	NA	NA	117212873	117181923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.20990	chr9	+	4427	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	132	0	-1	0	multi-exon	FALSE	canonical	3	206	junction_5	50.8700304698159	454	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6852	False	NA	NA	False	NA	NA	NA	107879831	107925981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
tx.20991	chr9	+	4368	7	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	130.254451832643	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6852	False	NA	NA	False	NA	NA	NA	107879831	107925981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107880022_107901301_107901523_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
tx.20992	chr9	+	4989	5	ISM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	132	0	-1	0	intron_retention	FALSE	canonical	3	292	junction_3	27.3541587331799	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6852	False	NA	NA	False	NA	NA	NA	107879831	107925981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923
tx.20993	chr9	+	4493	7	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	52	junction_5	118.632134488651	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6852	False	NA	NA	False	NA	NA	NA	107879831	107925979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
tx.20994	chr9	+	4837	6	FSM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	-9	-2671	0	-2	multi-exon	FALSE	canonical	3	91	junction_5	93.84540478894	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6853	False	NA	NA	False	NA	NA	NA	107879832	107925979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922513_107922661
tx.20995	chr9	+	1689	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	-45	-215	-9	1	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGTCCTTGTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	107926478	107929116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
tx.20996	chr9	+	1868	8	FSM	ENSMUSG00000070284.11	ENSMUST00000137284.8	1853	8	-14	-1	6	1	multi-exon	FALSE	canonical	3	100	junction_6	10.1196918562428	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGTCCTTGTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	107926473	107929116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928442_107928524
tx.20997	chr9	+	1783	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	37	882	10	3	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCCTTGTTGTTCATC	NA	False	NA	NA	False	NA	NA	NA	107926477	107929118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
tx.20998	chr9	+	1644	10	NNC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	37.1167660362221	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAAGAAGCAGTCCT	NA	False	NA	NA	False	NA	NA	NA	107926488	107929107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_107926594_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
tx.20999	chr9	-	5590	38	ISM	ENSMUSG00000041528.16	ENSMUST00000178267.8	4309	39	95	-5	-14	0	intron_retention	FALSE	canonical	3	35	junction_17	13.2204989468331	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	107956479	107928870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920
tx.21	chr1	+	2068	14	FSM	ENSMUSG00000025911.15	ENSMUST00000144177.8	3239	14	117	1054	10	15	multi-exon	FALSE	canonical	0	0	junction_4	25.1132346823944	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTACTGAGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	9618289	9647141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
tx.210	chr1	+	486	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	21	542	-15	3	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	309	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTTGGTTTTCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	39406943	39410450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
tx.2100	chr10	-	3971	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-30	1753	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	236.356425764141	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAGTGTCTCCTACCT	8539	False	NA	NA	False	NA	NA	NA	117215950	117183190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117213482_117213607_117215884
tx.21000	chr9	-	4684	39	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_38	16.5285784572411	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGGGCCCGCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	107956476	107928871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
tx.21001	chr9	-	4272	39	FSM	ENSMUSG00000041528.16	ENSMUST00000178267.8	4309	39	42	-5	-28	0	multi-exon	FALSE	canonical	3	35	junction_17	14.098780914274	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	107956532	107928870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
tx.21002	chr9	-	4290	39	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_17	14.9572798866187	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	107956532	107928870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
tx.21003	chr9	-	4707	39	FSM	ENSMUSG00000041528.16	ENSMUST00000162355.8	4727	39	18	2	-17	-2	multi-exon	FALSE	canonical	3	15	junction_38	17.254651305945	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGGCCCGCTCTTC	NA	False	NA	NA	False	NA	NA	NA	107956482	107928872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
tx.21004	chr9	+	2251	18	FSM	ENSMUSG00000032591.16	ENSMUST00000035211.14	2262	18	8	3	8	2	multi-exon	FALSE	canonical	3	16	junction_13	9.09998288906715	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGAGTGCTTCTTAGT	6671	False	NA	NA	False	NA	NA	NA	107957642	107962199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
tx.21005	chr9	-	2389	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	128	1	1	0	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	NA	False	NA	NA	NA	107971677	107962612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
tx.21006	chr9	-	4288	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5486	9	5486	-9	3prime_fragment	TRUE	canonical	3	14	junction_1	4.12310562561766	34	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCTTCAGACAGTCTCG	3789	False	NA	NA	False	NA	NA	NA	107982126	107973230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
tx.21007	chr9	-	5528	3	NIC	ENSMUSG00000039952.16	novel	4415	4	NA	NA	1	-232	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	230.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	108141013	108082064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_108086861_108095211_108095610_108140679
tx.21008	chr9	-	5568	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	-61	-1092	18	-232	multi-exon	FALSE	canonical	3	68	junction_3	198.863995959271	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	108140996	108082064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
tx.21009	chr9	-	5431	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	11	-1078	11	-232	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	108141003	108082064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
tx.2101	chr10	-	3977	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	2	2547	2	1819	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	681	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTGTCAAAGCCCTTC	4476	False	NA	NA	False	NA	NA	NA	117212873	117183124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.21010	chr9	-	5510	4	NIC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	12	-232	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	175.562587763516	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	108141145	108082064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_108086861_108095211_108095610_108130207_108130357_108140978
tx.21011	chr9	-	5373	3	FSM	ENSMUSG00000039952.16	ENSMUST00000166905.8	4244	3	-40	-1089	0	-232	multi-exon	FALSE	canonical	3	32	junction_2	218.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	108141157	108082064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108086861_108095211_108095610_108140978
tx.21012	chr9	-	5425	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	5	232	5	-232	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	342	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	108141152	108082064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
tx.21013	chr9	-	5484	3	NIC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	4	-232	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	227.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	108141113	108082064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_108086861_108095211_108095610_108140823
tx.21014	chr9	+	2119	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	14	0	-1	0	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	108167641	108173697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
tx.21015	chr9	+	2063	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	19	0	19	0	multi-exon	TRUE	canonical	3	166	junction_5	15.4029218007494	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	108174087	108179501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
tx.21016	chr9	-	1620	3	FSM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	170	-696	0	0	multi-exon	TRUE	canonical	3	19	junction_2	5	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTGTGGTTATTCAA	7285	False	NA	NA	False	NA	NA	NA	108183189	108180156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108181453_108182524_108182580_108182920
tx.21017	chr9	+	2014	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	183	0	-127	0	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	1050	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTATTCTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	108183510	108215133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
tx.21018	chr9	+	854	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	217	1	-5	-1	multi-exon	FALSE	canonical	3	8868	junction_1	0	1421	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTGTGTCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	108216469	108217541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108216758_108216975
tx.21019	chr9	+	3602	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	37	23	-7	2	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	1147	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGTGCAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	108225088	108269721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
tx.2102	chr10	-	3982	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-12	1817	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	185.108843523526	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTGTCAAAGCCCT	4503	False	NA	NA	False	NA	NA	NA	117212846	117183126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_117185407_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.21020	chr9	-	3067	8	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3347	119	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	4.97750039719553	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGAAAGGTTATTGT	NA	False	NA	NA	False	NA	NA	NA	108309030	108280690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_108283054_108283809_108283914_108289691_108289780_108290161_108290211_108294520_108294685_108298588_108298761_108305614_108305682_108308970
tx.21021	chr9	+	1746	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	17	1329	9	-1197	multi-exon	FALSE	canonical	3	208	junction_1	0	248	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTGGTGTGTGGG	204	False	NA	NA	False	NA	NA	NA	108337742	108341808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108337817_108340136
tx.21022	chr9	+	5607	33	FSM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	22	0	1	0	multi-exon	TRUE	canonical	3	106	junction_6	29.6719037980376	229	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9114	False	NA	NA	False	NA	NA	NA	108357077	108367729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
tx.21023	chr9	+	4655	27	FSM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-137	-6	117	6	multi-exon	FALSE	canonical	3	222	junction_10	41.4654094097091	256	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGATCCACAACATGTT	NA	False	NA	NA	False	NA	NA	NA	108367917	108379522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
tx.21024	chr9	+	4647	27	FSM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	-124	-6	-119	6	multi-exon	FALSE	canonical	3	118	junction_10	53.0108423653503	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGATCCACAACATGTT	NA	False	NA	NA	False	NA	NA	NA	108367919	108379522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
tx.21025	chr9	+	4642	27	FSM	ENSMUSG00000006676.17	ENSMUST00000085044.14	4520	27	-121	-1	-116	1	multi-exon	FALSE	canonical	3	46	junction_5	64.3458319914706	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGACTGATCCACAAC	NA	False	NA	NA	False	NA	NA	NA	108367922	108379517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
tx.21026	chr9	+	2445	24	FSM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	351	4	1	1	multi-exon	FALSE	canonical	3	468	junction_2	39.8133167299073	555	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTCTCTCTGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	108385255	108393136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
tx.21027	chr9	+	3233	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-20	-173	3	2	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	435	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1150	False	NA	NA	False	NA	NA	NA	108394288	108437364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
tx.21028	chr9	+	4301	10	ISM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	494	-2	9	2	3prime_fragment	FALSE	canonical	3	141	junction_1	164.63899902514	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1668	False	NA	NA	False	NA	NA	NA	108394806	108437364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
tx.21029	chr9	+	1695	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	152	11	-1	4	multi-exon	TRUE	canonical	3	1280	junction_13	396.993628196225	1246	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1147	False	NA	NA	False	NA	NA	NA	108437636	108442772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
tx.2103	chr10	-	5707	5	ISM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	15667	-4	-359	4	3prime_fragment	FALSE	canonical	3	530	junction_2	34.4419801985891	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCAGTTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	117197208	117180573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760
tx.21030	chr9	-	703	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	459	325	-45	-1	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTGCTCAGTTTGG	8602	False	NA	NA	False	NA	NA	NA	108444174	108443060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
tx.21031	chr9	+	1735	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	10	1	10	0	multi-exon	FALSE	canonical	3	83	junction_8	26.2473926292634	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	NA	False	NA	NA	NA	108447094	108449972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
tx.21032	chr9	+	1878	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	0	intron_retention	FALSE	canonical	3	128	junction_6	18.4357409183867	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	NA	False	NA	NA	NA	108447096	108449972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
tx.21033	chr9	-	4133	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	28	2	28	-2	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTGCCTTACCATCT	5779	False	NA	NA	False	NA	NA	NA	108455910	108449511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
tx.21034	chr9	-	3351	5	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	2721	2	2721	-2	3prime_fragment	FALSE	canonical	3	172	junction_2	13.8293166859393	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTGCCTTACCATCT	8472	False	NA	NA	False	NA	NA	NA	108453217	108449511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299
tx.21035	chr9	-	2509	9	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-7	38	intron_retention	FALSE	canonical	3	11	junction_4	18.9369843164111	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTAGTCTCATGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	108474786	108456022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097_108474180_108474406
tx.21036	chr9	-	1762	9	FSM	ENSMUSG00000006675.11	ENSMUST00000006853.11	1841	9	79	0	-8	0	multi-exon	FALSE	canonical	2	23	junction_3	12.7273082385868	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCGCTTGGGGGAGGGG	NA	False	NA	NA	False	NA	NA	NA	108474787	108456060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
tx.21037	chr9	-	3921	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	0	3	0	2	multi-exon	TRUE	canonical	3	517	junction_5	114.47891605978	1067	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	108526579	108480143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
tx.21038	chr9	-	3965	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	108526577	108480143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
tx.21039	chr9	-	4084	17	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_16	264.803228832278	65	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCTGTGGAGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	108526578	108480144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108523130_108523296_108526427
tx.2104	chr10	-	3977	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	7	1753	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	229.157173136692	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAGTGTCTCCTACCT	4481	False	NA	NA	False	NA	NA	NA	117212868	117183190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_117185373_117191686_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.21040	chr9	+	1750	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	34	-1	34	1	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	746	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGTGTGATATTTTCTC	5111	False	NA	NA	False	NA	NA	NA	108539330	108561841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
tx.21041	chr9	+	4959	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	7	-1	7	1	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	703	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTGGTGTGTCTCCTG	1310	False	NA	NA	False	NA	NA	NA	108569348	108627636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
tx.21042	chr9	+	1332	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-81	-644	-12	0	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	NA	NA	NA	108660982	108675188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
tx.21043	chr9	+	1990	2	FSM	ENSMUSG00000032599.13	ENSMUST00000193634.2	2820	2	-15	845	11	0	multi-exon	FALSE	canonical	3	119	junction_1	0	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	NA	NA	NA	108661005	108675188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108661070_108673262
tx.21044	chr9	+	1763	6	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	35.9243649909083	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTGCTGCTGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	108661008	108683531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_108661070_108673262_108673596_108675469_108675693_108676440_108676617_108681740_108681917_108682737
tx.21045	chr9	+	1175	3	FSM	ENSMUSG00000032599.13	ENSMUST00000192307.6	1191	3	16	0	-10	0	multi-exon	FALSE	canonical	3	25	junction_2	47	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	NA	NA	NA	108661010	108675188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108661070_108673262_108673596_108674405
tx.21046	chr9	+	2965	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	4	391	-1	-391	multi-exon	FALSE	canonical	3	52	junction_4	11.5551215196264	143	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3154	False	NA	NA	False	NA	NA	NA	108685570	108695652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
tx.21047	chr9	+	2660	21	FSM	ENSMUSG00000023259.18	ENSMUST00000188557.8	2552	21	-92	-16	0	0	multi-exon	TRUE	canonical	3	10	junction_1	9.81121806912883	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTCTGCTGTGGCA	NA	False	NA	NA	False	NA	NA	NA	108731241	108742112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108731386_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
tx.21048	chr9	+	3294	21	FSM	ENSMUSG00000023259.18	ENSMUST00000239562.1	2659	21	-638	3	-15	2	multi-exon	FALSE	canonical	3	10	junction_1	9.81121806912883	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTCTGCTGTGGCATG	NA	False	NA	NA	False	NA	NA	NA	108731257	108742114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108732034_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
tx.21049	chr9	+	1592	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	61	0	-20	0	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	5572	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	NA	False	NA	NA	NA	108765761	108778691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
tx.2105	chr10	-	6415	9	FSM	ENSMUSG00000055531.13	ENSMUST00000177145.8	3819	9	-35	-2561	7	-1870	multi-exon	FALSE	canonical	3	507	junction_4	46.3355627461241	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGTAAATTTTATGTCT	4481	False	NA	NA	False	NA	NA	NA	117212868	117187148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.21050	chr9	+	3400	15	NNC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	4.23300925429402	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAGTAATATGAGGT	NA	False	NA	NA	False	NA	NA	NA	108821012	108861290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
tx.21051	chr9	+	3329	14	FSM	ENSMUSG00000025648.19	ENSMUST00000198140.5	3488	14	159	0	-11	0	multi-exon	FALSE	canonical	3	8	junction_7	3.73057097014835	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAATATGAGGTGGTATT	NA	False	NA	NA	False	NA	NA	NA	108821004	108861296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
tx.21052	chr9	+	1827	6	FSM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	25	58	5	-5	multi-exon	FALSE	canonical	3	51	junction_2	78.9186923358465	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTTCCCCTTTCTTCAG	NA	False	NA	NA	False	NA	NA	NA	108867657	108886787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108867833_108869937_108870095_108880431_108880522_108885045_108885162_108885354_108885574_108885717
tx.21053	chr9	+	1823	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	6	5	6	-5	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTTCCCCTTTCTTCAG	NA	False	NA	NA	False	NA	NA	NA	108867658	108886787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
tx.21054	chr9	-	4114	14	NIC	ENSMUSG00000025646.10	novel	4215	14	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	34.9887555902104	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTGCCGCCTCTG	NA	False	NA	NA	False	NA	NA	NA	108903184	108887004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_108887997_108888256_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
tx.21055	chr9	-	2563	13	FSM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	9	0	5	0	multi-exon	FALSE	canonical	3	123	junction_2	14.834971819619	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCCTGAGTCCGA	NA	False	NA	NA	False	NA	NA	NA	108903183	108888814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
tx.21056	chr9	-	3210	8	ISM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	5	4016	1	-3102	5prime_fragment	FALSE	canonical	3	126	junction_6	12.2407816210354	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCCCATTCTGTTAGT	NA	False	NA	NA	False	NA	NA	NA	108903187	108892830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
tx.21057	chr9	-	634	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	209	101	0	-101	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	760	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTGTGTGTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	108911446	108907055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
tx.21058	chr9	+	1525	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	1	0	1	0	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTTATATCAGACTCAG	NA	False	NA	NA	False	NA	NA	NA	108911561	108921557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
tx.21059	chr9	+	3256	3	ISM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	5045	-6	5045	6	3prime_fragment	FALSE	canonical	3	81	junction_1	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCAGACTCAGTTTTAT	1952	False	NA	NA	False	NA	NA	NA	108916605	108921563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_108918716_108919908_108920074_108920582
tx.2106	chr10	-	3781	10	NIC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	-18	25	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	184.803465843188	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCACTAATGTACTCTG	4497	False	NA	NA	False	NA	NA	NA	117212852	117189684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.21060	chr9	+	7530	38	NNC	ENSMUSG00000053646.14	novel	799	6	NA	NA	-593	-941	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	5.06524270995357	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGGTCTCAGGTCCAT	9210	False	NA	NA	False	NA	NA	NA	108923863	108948044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_108923943_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934477_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
tx.21061	chr9	+	1056	7	FSM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	17	1	4	-1	multi-exon	FALSE	canonical	3	194	junction_1	146.935359937627	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGCAAGCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	109661842	109672041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
tx.21062	chr9	+	1118	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	38	-437	0	-8	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGTACTCCTGTGCAAG	NA	False	NA	NA	False	NA	NA	NA	109661854	109672034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
tx.21063	chr9	+	1191	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200468.2	865	6	-23	-303	-11	8	multi-exon	FALSE	canonical	3	493	junction_3	57.3431774494578	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCAGTACTCCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	109662086	109672032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
tx.21064	chr9	+	3663	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	122.641442707544	177	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	109704612	109722963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
tx.21065	chr9	+	3663	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	-31	0	-31	0	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	858	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	109704615	109722963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
tx.21066	chr9	+	5523	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	70.836712541944	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGTTATGTTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	109760878	109913013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
tx.21067	chr9	+	5614	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-45	4	19	-3	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATGTTATGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	109760886	109913011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
tx.21068	chr9	+	5740	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	343	8	3	0	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	376	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	109760870	109913015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
tx.21069	chr9	-	203	1	Intergenic	novelGene_381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGCACCACTGTGAGT	8629	False	NA	NA	False	NA	NA	NA	109840818	109840615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_-_109840600_109840800
tx.2107	chr10	-	2498	2	FSM	ENSMUSG00000020184.16	ENSMUST00000131627.2	919	2	-226	-1353	-226	5	multi-exon	FALSE	canonical	3	533	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTTACACATTTTT	NA	False	NA	NA	False	NA	NA	NA	117527651	117524794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_117526691_117527049
tx.21070	chr9	+	4659	13	ISM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	103173	8	-2109	0	3prime_fragment	FALSE	canonical	3	302	junction_7	26.1990245789588	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	2049	False	NA	NA	False	NA	NA	NA	109863700	109913015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
tx.21071	chr9	-	3761	19	FSM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	44	1	-4	0	multi-exon	FALSE	canonical	3	264	junction_18	79.7176537599273	487	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	NA	False	NA	NA	NA	109930111	109913388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
tx.21072	chr9	-	4074	24	NIC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_23	187.238846485633	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	NA	False	NA	NA	NA	109946481	109913387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109945745_109945861_109946425
tx.21073	chr9	-	3962	23	FSM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	6	0	3	0	multi-exon	FALSE	canonical	3	120	junction_20	140.114150629448	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	NA	False	NA	NA	NA	109946484	109913387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
tx.21074	chr9	-	4028	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	412	1	1	0	multi-exon	FALSE	canonical	3	162	junction_20	135.338876788039	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	NA	False	NA	NA	NA	109946486	109913388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
tx.21075	chr9	-	4056	24	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	182.775513865531	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	NA	False	NA	NA	NA	109946484	109913387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
tx.21076	chr9	-	1785	2	FSM	ENSMUSG00000032480.18	ENSMUST00000196788.2	1424	2	-42	-319	3	319	multi-exon	FALSE	canonical	3	279	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATCAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	109946484	109942924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_109944651_109946425
tx.21077	chr9	+	5674	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	42	1	-15	-1	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	1706	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	2487	False	NA	NA	False	NA	NA	NA	109961089	110069245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
tx.21078	chr9	+	3552	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	-15	1	-15	-1	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	551	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCATAGTTCCTGGCTG	2487	False	NA	NA	False	NA	NA	NA	109961089	110064358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
tx.21079	chr9	+	2438	5	FSM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	1350	2	-350	-1	multi-exon	TRUE	canonical	3	35	junction_4	8.38152730712011	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCTTAGTGCCGTGGC	9787	False	NA	NA	False	NA	NA	NA	110074200	110091642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085289_110091127
tx.2108	chr10	-	3044	10	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	10	3	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	135.429996494932	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	NA	False	NA	NA	NA	117546187	117524796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850
tx.21080	chr9	+	2061	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	22	-779	-9	0	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTGTGTGTGTGTTCCT	2204	False	NA	NA	False	NA	NA	NA	110134262	110151170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
tx.21081	chr9	+	4122	23	NIC	ENSMUSG00000032485.15	novel	619	5	NA	NA	5	-4	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	21.4736528936053	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAGGGGCTGAAGTTC	NA	False	NA	NA	False	NA	NA	NA	110162368	110214014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
tx.21082	chr9	+	4224	23	FSM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	-2	5	-2	-5	multi-exon	FALSE	canonical	3	36	junction_1	22.4939385774762	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAGGGGCTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	110162421	110214013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
tx.21083	chr9	-	2526	6	ISM	ENSMUSG00000036057.12	ENSMUST00000040021.12	5346	25	20147	4	-1417	-4	3prime_fragment	FALSE	canonical	3	78	junction_2	13.5410487038486	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGAGTTCACCTACTG	NA	False	NA	NA	False	NA	NA	NA	110217134	110214153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798
tx.21084	chr9	-	5320	25	FSM	ENSMUSG00000036057.12	ENSMUST00000040021.12	5346	25	21	5	21	-5	multi-exon	FALSE	canonical	3	45	junction_24	14.8742413438654	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGAGTTCACCTACT	NA	False	NA	NA	False	NA	NA	NA	110237260	110214154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
tx.21085	chr9	-	4491	10	FSM	ENSMUSG00000054792.16	ENSMUST00000068025.13	4530	10	38	1	33	-1	multi-exon	FALSE	canonical	1	6	junction_9	1.68508343201146	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGCAGTTTCCTGATT	1996	False	NA	NA	False	NA	NA	NA	110305724	110254994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265302_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
tx.21086	chr9	+	3369	21	NIC	ENSMUSG00000032489.18	novel	2956	21	NA	NA	-200	208	combination_of_known_junctions	TRUE	canonical	0	0	junction_7	1.07121426428143	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTCCCTGTCAGATTTT	618	False	NA	NA	False	NA	NA	NA	110305825	110353510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_110306152_110312128_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110343496_110343692_110346572_110346788_110348102_110348280_110348567_110348684_110350327_110350433_110352794
tx.21087	chr9	+	8388	20	NNC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-66	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.6141908596743	14	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGCTCCCTCAAAATT	NA	False	NA	NA	False	NA	NA	NA	110361598	110447681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_110361825_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
tx.21088	chr9	+	6287	19	ISM	ENSMUSG00000044791.17	ENSMUST00000153838.8	8350	21	16481	22	1108	-3	3prime_fragment	FALSE	canonical	3	73	junction_11	18.8384948679264	40	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	110378145	110447679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
tx.21089	chr9	+	7148	19	NIC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	244	-3	combination_of_known_junctions	FALSE	canonical	3	46	junction_11	22.8065536390067	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	110377281	110447679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
tx.2109	chr10	-	3126	11	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	479	17	13	3	3prime_fragment	FALSE	canonical	3	473	junction_6	30.8506077735918	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	NA	False	NA	NA	NA	117546184	117524796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
tx.21090	chr9	-	1195	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	28	0	7	0	multi-exon	FALSE	canonical	3	119	junction_3	3.96074487943871	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	8952	False	NA	NA	False	NA	NA	NA	110453492	110450202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
tx.21091	chr9	-	2023	4	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	7	3	intron_retention	TRUE	canonical	3	126	junction_2	1.88561808316413	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTCCTTGGACCTGT	8952	False	NA	NA	False	NA	NA	NA	110453492	110450199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_110450806_110450907_110451051_110451139_110452304_110453382
tx.21092	chr9	-	4204	27	ISM	ENSMUSG00000056724.16	ENSMUST00000133191.8	8782	54	21073	4	-1037	-4	3prime_fragment	TRUE	canonical	2	7	junction_5	3.83073833784269	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCGGTTTCTTGAGTAC	288	False	NA	NA	False	NA	NA	NA	110462156	110453860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110455699_110455800_110455974_110456145_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457373_110457461_110457572_110457686_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044
tx.21093	chr9	+	798	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	23	13	1	0	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	200	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTGTTTCATTTCCT	8505	False	NA	NA	False	NA	NA	NA	110485593	110540661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
tx.21094	chr9	+	3572	28	NIC	ENSMUSG00000044037.16	novel	5150	27	NA	NA	1	-1625	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	6.93532734858988	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTCATCTCATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	110709242	110727967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_110709298_110709409_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
tx.21095	chr9	+	5233	27	FSM	ENSMUSG00000044037.16	ENSMUST00000155014.2	5150	27	-81	-2	23	-1	multi-exon	FALSE	canonical	3	12	junction_1	6.10945527743532	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	110709323	110729597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
tx.21096	chr9	-	1863	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	64	5	0	-5	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	4749	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTGAGTAGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	110775162	110768675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
tx.21097	chr9	+	3638	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-640	-5	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	30	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCCTTGTTCCACGTG	NA	False	NA	NA	False	NA	NA	NA	110782226	110813129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
tx.21098	chr9	+	2086	9	NIC	ENSMUSG00000032495.9	novel	666	5	NA	NA	-303	-1832	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	99.4054198723591	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGAAAATATTTC	NA	False	NA	NA	False	NA	NA	NA	110782563	110811302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_110782957_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
tx.21099	chr9	+	1671	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-123	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_4	82.1734277137216	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	110789778	110811316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
tx.211	chr1	+	494	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	-5	-2	-5	0	multi-exon	FALSE	canonical	3	1086	junction_1	4596.75456164455	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	39407004	39410447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
tx.2110	chr10	-	3072	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	10	17	10	3	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	469	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	NA	False	NA	NA	NA	117546653	117524796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
tx.21100	chr9	+	3325	6	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-120	-4	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	108.012962185101	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTGTTCCACGTGT	NA	False	NA	NA	False	NA	NA	NA	110789781	110813130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_110790078_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
tx.21101	chr9	+	3302	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	83.1033092000553	33	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	110789788	110813134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
tx.21102	chr9	+	3424	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	9206	5	-83	-5	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	85	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCCTTGTTCCACGTG	NA	False	NA	NA	False	NA	NA	NA	110789818	110813129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
tx.21103	chr9	+	3341	16	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.1629816617895	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	110947168	111054735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111023497_111023543_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
tx.21104	chr9	+	2948	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	-7	-1102	-5	-343	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATAATTGTCCCTTTT	NA	False	NA	NA	False	NA	NA	NA	110947173	111054392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
tx.21105	chr9	+	1773	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	-28	1446	-4	0	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	110947174	111053290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
tx.21106	chr9	-	4584	16	NIC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	-5	-12	intron_retention	FALSE	canonical	3	322	junction_5	32.5504053567523	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAACCGCACATTGGA	NA	False	NA	NA	False	NA	NA	NA	111100607	111057307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
tx.21107	chr9	-	2530	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	238	-14	-7	-13	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	373	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	NA	False	NA	NA	NA	111100621	111057308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
tx.21108	chr9	+	3023	5	FSM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	6	junction_1	10.8483869768736	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	NA	False	NA	NA	False	NA	NA	NA	111268130	111318186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_111268421_111296545_111298384_111311685_111311819_111313984_111314153_111317592
tx.21109	chr9	+	2149	4	ISM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	28981	0	28981	0	3prime_fragment	FALSE	canonical	3	22	junction_1	4.96655480858378	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	7227	False	NA	NA	False	NA	NA	NA	111297129	111318186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_111298384_111311685_111311819_111313984_111314153_111317592
tx.2111	chr10	-	3520	5	NNC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.0613955098562	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTGATAAGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	117582291	117569582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_117572139_117576416_117576500_117576657_117576817_117580632_117580753_117581689
tx.21110	chr9	+	818	2	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	47896	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	3930	False	NA	NA	False	NA	NA	NA	111316044	111318186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_111316269_111317592
tx.21111	chr9	+	1549	2	Intergenic	novelGene_382	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACTCTTTGACAGTTT	1237	False	NA	NA	False	NA	NA	NA	111353202	111361784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_+_111353258_111360290
tx.21112	chr9	-	6641	17	NIC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	2	1234	intron_retention	FALSE	canonical	3	268	junction_2	36.4638091125982	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGAATATTCTCTTGG	NA	False	NA	NA	False	NA	NA	NA	113537310	113482305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
tx.21113	chr9	-	5934	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	12	5	-3	-5	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	523	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTTCTGTGGAGTATG	NA	False	NA	NA	False	NA	NA	NA	113537315	113480816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
tx.21114	chr9	-	5958	18	FSM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	-8	-2727	7	-1	multi-exon	FALSE	canonical	2	4	junction_12	92.4204698786755	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTGGAGTATGAATT	NA	False	NA	NA	False	NA	NA	NA	113537320	113480812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514507_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
tx.21115	chr9	+	6314	36	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-16	13	combination_of_known_splicesites	FALSE	canonical	3	90	junction_24	28.274947445773	151	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	113570524	113748763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
tx.21116	chr9	+	3649	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	201	0	201	0	multi-exon	FALSE	canonical	3	95	junction_1	91.3275141660497	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1503	False	NA	NA	False	NA	NA	NA	113760202	113806267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
tx.21117	chr9	+	3557	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	206	0	intron_retention	FALSE	canonical	3	42	junction_1	104.062673423279	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1508	False	NA	NA	False	NA	NA	NA	113760207	113806267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
tx.21118	chr9	+	3536	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	206	0	206	0	multi-exon	FALSE	canonical	3	95	junction_1	93.8633522142103	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1508	False	NA	NA	False	NA	NA	NA	113760207	113806267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
tx.21119	chr9	+	3491	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	206	0	intron_retention	FALSE	canonical	3	95	junction_1	93.8633522142103	56	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1508	False	NA	NA	False	NA	NA	NA	113760207	113806270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
tx.2112	chr10	-	3535	5	FSM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	-45	-1	-45	1	multi-exon	FALSE	canonical	3	51	junction_4	6.41774882649672	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTGATAAGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	117582315	117569582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
tx.21120	chr9	+	3590	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	212	0	intron_retention	FALSE	canonical	3	95	junction_1	91.3275141660497	56	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1514	False	NA	NA	False	NA	NA	NA	113760213	113806267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
tx.21121	chr9	+	3673	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	198	0	intron_retention	TRUE	canonical	3	42	junction_1	101.01175674148	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1500	False	NA	NA	False	NA	NA	NA	113760199	113806267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
tx.21122	chr9	+	3920	16	FSM	ENSMUSG00000009741.16	ENSMUST00000216558.2	1623	16	-479	-1818	241	-1	multi-exon	FALSE	canonical	3	224	junction_8	65.0003076915794	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGTCACTCATTTCAAAT	1543	False	NA	NA	False	NA	NA	NA	113760242	113806269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
tx.21123	chr9	+	3623	15	FSM	ENSMUSG00000009741.16	ENSMUST00000214095.2	2320	15	-73	-1230	-73	0	multi-exon	FALSE	canonical	3	191	junction_7	65.0304481275769	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1730	False	NA	NA	False	NA	NA	NA	113760429	113806267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
tx.21124	chr9	-	3443	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	22	-1	-10	1	multi-exon	FALSE	canonical	3	21	junction_13	8.10139821643304	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCATTGAAGTAGTCTG	NA	False	NA	NA	False	NA	NA	NA	113855807	113805773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
tx.21125	chr9	-	2206	15	NIC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-11	11	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	11.0628999408853	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGATGTGGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	113875270	113807093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113875140
tx.21126	chr9	+	3877	5	FSM	ENSMUSG00000086596.3	ENSMUST00000135338.3	4083	5	213	-7	213	7	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGAATTTCTACATTA	NA	False	NA	NA	False	NA	NA	NA	113886420	113927803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_113886713_113893023_113893202_113897824_113897944_113911488_113911678_113924704
tx.21127	chr9	-	1692	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	-20	2	-20	-2	multi-exon	FALSE	canonical	3	526	junction_5	47.5280618862864	403	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTCTCCGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	114219763	114204203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
tx.21128	chr9	+	1903	12	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	110.549342036909	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	NA	False	NA	NA	NA	114230160	114303446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_114230338_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
tx.21129	chr9	+	2370	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	27	-1	-5	1	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	253	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	NA	False	NA	NA	NA	114230170	114303446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
tx.2113	chr10	-	3110	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	4	0	-3	0	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	1503	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	NA	False	NA	NA	NA	117628606	117586525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
tx.21130	chr9	+	2200	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	76.8975265651421	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	NA	False	NA	NA	NA	114230170	114303446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
tx.21131	chr9	+	3266	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	-12	-333	-12	333	multi-exon	FALSE	canonical	3	40	junction_1	0	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTAGTTAGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	114230160	114236677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_114230338_114233588
tx.21132	chr9	+	6783	2	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	352	3926	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCGGTGTCCATTCTTCA	NA	False	NA	NA	False	NA	NA	NA	114230524	114240270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_114230626_114233588
tx.21133	chr9	-	9251	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	77	4	77	-4	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGGTGTCCGTGTGA	NA	False	NA	NA	False	NA	NA	NA	114393360	114336204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
tx.21134	chr9	-	2714	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-9	-134	combination_of_known_splicesites	FALSE	canonical	3	267	junction_4	76.1876338755546	284	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	114469261	114415167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
tx.21135	chr9	-	2710	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-9	-135	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_7	96.2047231971076	134	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	114469261	114415168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
tx.21136	chr9	+	2634	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	-23	-10	-23	10	multi-exon	FALSE	canonical	3	336	junction_8	45.3210767744986	739	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAACGTGTTGCCTTTTC	2103	False	NA	NA	False	NA	NA	NA	114517834	114553380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
tx.21137	chr9	+	3361	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	22	0	22	0	multi-exon	FALSE	canonical	3	606	junction_3	12.8322510366134	1503	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	NA	False	NA	NA	NA	114560262	114578412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
tx.21138	chr9	-	1132	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	-139	0	-132	0	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	717	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCCTTATTGCATGAGA	NA	False	NA	NA	False	NA	NA	NA	114611056	114585903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
tx.21139	chr9	-	4316	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	70	5	-38	-5	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATAACTTGATTGTTGT	NA	False	NA	NA	False	NA	NA	NA	114762985	114728413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
tx.2114	chr10	-	2103	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	26	595	26	-595	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	1000	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGGTGTTATTTTACAC	8631	False	NA	NA	False	NA	NA	NA	117681914	117650370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
tx.21140	chr9	-	3321	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	-38	-7	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	29.0376910239089	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTATAACTTGATTGTT	NA	False	NA	NA	False	NA	NA	NA	114762985	114728415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_114730448_114731440_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
tx.21141	chr9	+	3782	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-257	-1048	-257	1046	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGTGTCTTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	114807379	115062339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
tx.21142	chr9	-	4375	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-46	-108	-46	108	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	1383	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCTTGTCTCTTGCAG	NA	False	NA	NA	False	NA	NA	NA	115139535	115071540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
tx.21143	chr9	-	2630	7	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	56395	-110	56395	110	3prime_fragment	FALSE	canonical	3	663	junction_6	59.9128997425058	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTTGTCTCTTGCAGAC	NA	False	NA	NA	False	NA	NA	NA	115083094	115071538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900
tx.21144	chr9	+	3161	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	23	-259	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTGAAATACTGTCC	9608	False	NA	NA	False	NA	NA	NA	117869589	117892648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
tx.21145	chr9	+	3367	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	25	4	25	-4	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAGCTGTATTTTGTGA	9610	False	NA	NA	False	NA	NA	NA	117869591	117892903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
tx.21146	chr9	-	1073	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	87	9	73	-9	multi-exon	TRUE	canonical	3	173	junction_1	9.03081145609604	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACCAGGAAGGCA	NA	False	NA	NA	False	NA	NA	NA	117979158	117893598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
tx.21147	chr9	-	2022	4	Fusion	ENSMUSG00000103968.2_ENSMUSG00000098161.2	novel	388	4	NA	NA	-48	-2	multi-exon	FALSE	canonical	3	32	junction_1	11.8602979164381	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGCACAGAAAAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	118235215	118231534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr9_-_118233232_118233371_118233493_118233797_118233891_118235104
tx.21148	chr9	+	3168	6	FSM	ENSMUSG00000032446.15	ENSMUST00000111763.8	2869	6	441	-740	-208	-26	multi-exon	FALSE	canonical	2	3	junction_5	6.66333249958307	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGGTATAGCTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	118307720	118315174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313398
tx.21149	chr9	+	3031	6	FSM	ENSMUSG00000032446.15	ENSMUST00000035020.15	3560	6	513	16	-4	-16	multi-exon	FALSE	canonical	3	9	junction_5	4.35430821141545	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTCTTCTGTACTAT	NA	False	NA	NA	False	NA	NA	NA	118307924	118315184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313341
tx.2115	chr10	+	3130	15	FSM	ENSMUSG00000020212.15	ENSMUST00000163238.9	2461	15	-51	-618	-3	2	multi-exon	FALSE	canonical	2	2	junction_7	33.0859270903593	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	117977712	118004904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117992738_117992769_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
tx.21150	chr9	+	7602	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_12	53.3849663424073	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118335312	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
tx.21151	chr9	+	7661	25	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_24	53.463318161978	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118335321	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
tx.21152	chr9	+	7513	23	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	54.2322256367988	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118335320	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
tx.21153	chr9	+	7695	25	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	63.0103607000909	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118335321	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
tx.21154	chr9	+	7596	24	FSM	ENSMUSG00000038708.11	ENSMUST00000084820.6	7583	24	-13	0	-13	0	multi-exon	FALSE	canonical	3	96	junction_12	49.6666772391441	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118335321	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
tx.21155	chr9	+	7574	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_9	60.6499142480736	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118335321	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
tx.21156	chr9	+	7652	25	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_12	56.5700156148703	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118335327	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
tx.21157	chr9	+	7577	24	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	57.6555182976455	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118335321	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
tx.21158	chr9	+	7505	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_9	57.795396453694	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118335325	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
tx.21159	chr9	+	4471	11	FSM	ENSMUSG00000038708.11	ENSMUST00000211840.2	4461	11	-10	0	-10	0	multi-exon	FALSE	canonical	3	74	junction_10	60.3685348505329	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	71	True	NA	NA	NA	118385837	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
tx.2116	chr10	+	3098	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	-22	-2	-1	2	multi-exon	FALSE	canonical	3	66	junction_4	15.3152281412244	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	117977714	118004904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
tx.21160	chr9	+	4589	10	ISM	ENSMUSG00000038708.11	ENSMUST00000084820.6	7583	24	50320	0	-193	0	3prime_fragment	FALSE	canonical	3	147	junction_9	30.9587539226702	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	118385654	118411587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
tx.21161	chr9	+	3803	28	FSM	ENSMUSG00000039115.14	ENSMUST00000044165.14	7020	28	-35	3252	-35	28	multi-exon	TRUE	canonical	2	4	junction_19	2.10688335604858	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACTGAAATCTTGGAAATA	NA	False	NA	NA	False	NA	NA	NA	118435722	118726819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_118436184_118455515_118455644_118457206_118457314_118465570_118465695_118481564_118481633_118487533_118487664_118490415_118490502_118492937_118493007_118497679_118497818_118500766_118500873_118501877_118501973_118510003_118510095_118510802_118510849_118518337_118518493_118527381_118527543_118598159_118598310_118613169_118613247_118636232_118636384_118661801_118661889_118663363_118663444_118670160_118670251_118672556_118672666_118679766_118679875_118698358_118698485_118700888_118701009_118706189_118706292_118716831_118716952_118726301
tx.21162	chr9	+	2349	3	FSM	ENSMUSG00000065513.3_ENSMUSG00000047409.14	ENSMUST00000174132.2	1200	3	-1128	-21	77	21	multi-exon	FALSE	canonical	3	7	junction_2	2	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAGAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	118860940	118869998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_118862697_118866428_118866615_118869591
tx.21163	chr9	+	2723	20	FSM	ENSMUSG00000038775.15	ENSMUST00000051386.13	2909	20	-2	188	-2	5	multi-exon	TRUE	canonical	2	4	junction_1	8.09945109456443	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCACGTGTGCCTGTGT	4705	False	NA	NA	False	NA	NA	NA	118881843	118900399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_118881897_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
tx.21164	chr9	-	2640	15	FSM	ENSMUSG00000010660.4	ENSMUST00000010804.4	2657	15	11	6	11	-6	multi-exon	FALSE	canonical	3	6	junction_14	9.15540433686184	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAATCCTTCTAGTCTCT	2849	False	NA	NA	False	NA	NA	NA	118922559	118900600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
tx.21165	chr9	-	2702	15	FSM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	0	4	0	-4	multi-exon	TRUE	canonical	3	27	junction_4	6.31163486696415	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTTCTAGTCTCTTT	8079	False	NA	NA	False	NA	NA	NA	118917329	118900598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
tx.21166	chr9	-	4533	17	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	3	12	junction_15	69.1425158639748	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5571	False	NA	NA	False	NA	NA	NA	119151494	119067503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119133870_119133984_119151070
tx.21167	chr9	-	4642	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	-1	6	-1	-6	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	528	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5571	False	NA	NA	False	NA	NA	NA	119151494	119067503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
tx.21168	chr9	-	7596	16	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-255	-6	intron_retention	FALSE	canonical	3	230	junction_8	21.5977365069172	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5317	False	NA	NA	False	NA	NA	NA	119151748	119067503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_119070283_119070776_119070842_119071785_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
tx.21169	chr9	-	4772	19	FSM	ENSMUSG00000036737.13	ENSMUST00000128880.8	2433	19	-109	-2230	-4	-8	multi-exon	FALSE	canonical	3	9	junction_15	88.2525136913363	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAATGCTTTCATTTA	5568	False	NA	NA	False	NA	NA	NA	119151497	119067505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119119802_119119932_119123480_119123590_119133870_119133984_119151070
tx.2117	chr10	+	2837	12	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	32.0750669111597	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	117977725	118004904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_117977868_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
tx.21170	chr9	-	2915	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	-960	5	410	-5	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACTTGTGACTGACGGT	NA	False	NA	NA	False	NA	NA	NA	119170067	119165004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
tx.21171	chr9	+	1631	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	127	4	7	-3	multi-exon	TRUE	canonical	3	245	junction_2	23.8777880116768	203	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGCTTGTCATTTCC	7855	False	NA	NA	False	NA	NA	NA	119170486	119179361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
tx.21172	chr9	+	3227	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	169	-13	-19	4	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	119186615	119222399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
tx.21173	chr9	+	3150	18	FSM	ENSMUSG00000035769.10	ENSMUST00000215822.2	3134	18	-12	-4	-12	4	multi-exon	FALSE	canonical	3	22	junction_2	17.3265002945415	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	119186622	119222399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
tx.21174	chr9	+	3455	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	11	-11	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	40.556133938037	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAATAGAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	119231194	119264050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
tx.21175	chr9	+	3477	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-313	11	13	-11	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAATAGAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	119231196	119264050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
tx.21176	chr9	+	2105	10	FSM	ENSMUSG00000061393.15	ENSMUST00000165044.3	2093	10	3	-15	3	15	multi-exon	TRUE	canonical	3	128	junction_3	24.155872429691	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231186	119262596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
tx.21177	chr9	+	3931	7	FSM	ENSMUSG00000042787.16	ENSMUST00000214462.2	2624	7	-37	-1270	7	-8	multi-exon	FALSE	canonical	2	5	junction_1	29.590257405662	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGACCGGTGATTGG	NA	False	NA	NA	False	NA	NA	NA	119274015	119294575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119274217_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
tx.21178	chr9	+	2541	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	16	1275	-1	3	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGACTGCATATTTATT	NA	False	NA	NA	False	NA	NA	NA	119274024	119293308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
tx.21179	chr9	+	3026	8	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	2	342	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	21.0092302358283	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGTGTGACTGTCCGT	NA	False	NA	NA	False	NA	NA	NA	119274027	119293647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
tx.2118	chr10	+	2963	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	21.2053452380919	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	117977714	118004904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
tx.21180	chr9	+	3837	7	FSM	ENSMUSG00000042787.16	ENSMUST00000164213.5	2571	7	-1	-1265	-1	-14	multi-exon	FALSE	canonical	3	15	junction_2	23.8706002345051	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGTTGCTTCTGACCGGT	NA	False	NA	NA	False	NA	NA	NA	119274024	119294569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
tx.21181	chr9	+	3836	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	9	0	-8	0	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	411	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGCTGGACATGT	NA	False	NA	NA	False	NA	NA	NA	119723952	119755652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
tx.21182	chr9	-	2557	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	16	1333	1	-1333	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTTGTAACTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	119766615	119755655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
tx.21183	chr9	-	2951	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCTTCTTGGTGAGG	NA	False	NA	NA	False	NA	NA	NA	119813782	119800228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
tx.21184	chr9	+	1969	7	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	-14	-179	intron_retention	FALSE	canonical	3	13	junction_3	53.5184288093571	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCACCAGGGTGGAGAC	1777	False	NA	NA	False	NA	NA	NA	119939456	119953391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949503_119949738_119949914_119951159_119951327_119952707
tx.21185	chr9	+	1596	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	17	178	-14	-178	multi-exon	FALSE	canonical	3	111	junction_3	17.3173002771474	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCACCAGGGTGGAGACT	1777	False	NA	NA	False	NA	NA	NA	119939456	119953392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
tx.21186	chr9	+	1031	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	98	809	-2	1	multi-exon	FALSE	canonical	3	2998	junction_3	1065.2190176464	1303	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGGTCCTCACTGCAGA	NA	False	NA	NA	False	NA	NA	NA	119956852	119960626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
tx.21187	chr9	+	2479	6	FSM	ENSMUSG00000032517.17	ENSMUST00000174193.8	2609	6	-32	162	3	-162	multi-exon	FALSE	canonical	2	7	junction_4	5.38144961882948	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTATCTGGAGATTGCT	NA	False	NA	NA	False	NA	NA	NA	119978775	120010388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_120002216_120002442_120008392_120008472_120008590
tx.21188	chr9	+	1045	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	-13	3	-13	-3	multi-exon	FALSE	canonical	3	407	junction_2	26.9608770051883	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAGCAATGCACTTTG	NA	False	NA	NA	False	NA	NA	NA	120321543	120324393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
tx.21189	chr9	+	2951	11	FSM	ENSMUSG00000041608.9	ENSMUST00000047687.9	3453	11	-7	509	-7	-509	multi-exon	FALSE	canonical	3	4	junction_7	3.21869538788622	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGTATTTGTTAACTT	NA	False	NA	NA	False	NA	NA	NA	120368876	120396884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_120368950_120369717_120369770_120373024_120373153_120383134_120383253_120384710_120384862_120386457_120386618_120387401_120387636_120389546_120389820_120389986_120390098_120390964_120391103_120395371
tx.2119	chr10	-	6152	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	-34	11	-34	-11	multi-exon	FALSE	canonical	3	29	junction_2	3.5	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTACCTTACATCTCAC	NA	False	NA	NA	False	NA	NA	NA	118705088	118691518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_118697059_118704054_118704204_118704625
tx.21190	chr9	+	725	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	63	221	-7	1	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	3409	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGTGTGGACTCTA	NA	False	NA	NA	False	NA	NA	NA	120400572	120403499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
tx.21191	chr9	+	3615	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	7	1	7	0	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	1072	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTCATTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	120762472	120789572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
tx.21192	chr9	-	4118	37	NIC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	-14	-2	combination_of_known_junctions	TRUE	canonical	2	8	junction_10	8.02772971919486	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCATGTGTCAAACCCT	NA	False	NA	NA	False	NA	NA	NA	121106277	120793521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086488_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
tx.21193	chr9	+	3545	14	FSM	ENSMUSG00000032536.13	ENSMUST00000211439.2	3533	14	-12	0	10	0	multi-exon	FALSE	canonical	3	209	junction_1	23.6693195168457	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGCCTTTCTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	121126587	121284948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
tx.21194	chr9	+	5407	17	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	1	0	combination_of_known_splicesites	TRUE	canonical	3	22	junction_15	60.0020507462037	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	121126578	121303982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289782_121298050_121298154_121301302
tx.21195	chr9	+	5208	17	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_15	49.7895179103996	139	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	NA	False	NA	NA	NA	121126579	121303985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
tx.21196	chr9	+	5262	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	8	-1917	8	0	multi-exon	FALSE	canonical	3	114	junction_15	40.0713718725726	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	121126585	121303982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
tx.21197	chr9	+	4512	15	ISM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	8	10389	8	0	5prime_fragment	FALSE	canonical	3	209	junction_1	22.8924949826491	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGGTCCTAGTTTTAC	NA	False	NA	NA	False	NA	NA	NA	121126585	121291676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
tx.21198	chr9	+	5839	2	ISM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	98916	-1	11636	1	3prime_fragment	FALSE	canonical	3	238	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	NA	False	NA	NA	NA	121294997	121303985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_121298154_121301302
tx.21199	chr9	-	2679	7	FSM	ENSMUSG00000061536.14	ENSMUST00000111560.10	2669	7	1	-11	1	11	multi-exon	FALSE	canonical	3	5	junction_5	6.55108133567785	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTATTGTTTTCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	121534094	121512088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121533989
tx.212	chr1	+	634	4	FSM	ENSMUSG00000073702.12	ENSMUST00000179954.8	630	4	1	-5	1	4	multi-exon	FALSE	canonical	3	8615	junction_3	1758.8270712798	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGGTTTTCCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	39407010	39410451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_39407337_39409094_39409221_39410034_39410148_39410382
tx.2120	chr10	-	3872	13	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	20316	3330	-7130	-3330	3prime_fragment	FALSE	canonical	3	515	junction_9	93.6644053700942	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTTTCTTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	119055644	119038489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494
tx.21200	chr9	+	558	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	19	0	2	0	multi-exon	FALSE	canonical	3	377	junction_1	21	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	NA	False	NA	NA	NA	121539413	121541987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121539538_121539704_121539782_121541630
tx.21201	chr9	+	7078	18	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-27	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	11.909113720986	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTTGGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	121548207	121585903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
tx.21202	chr9	+	7029	17	FSM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	-15	8	-8	-8	multi-exon	FALSE	canonical	3	17	junction_5	11.4065496535981	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGCCTGCTTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	121548226	121585901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
tx.21203	chr9	+	6954	17	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	14.7985166064035	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTTGGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	121548226	121585903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
tx.21204	chr9	+	7044	18	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_16	13.0067855594007	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTGGTCTTTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	121548249	121585908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
tx.21205	chr9	+	7055	19	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	16.67074024292	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTTGGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	121548258	121585903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121567453_121567482_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
tx.21206	chr9	+	4329	6	FSM	ENSMUSG00000013419.8	ENSMUST00000093772.4	6353	6	-287	2311	-287	377	multi-exon	FALSE	canonical	2	7	junction_1	5.5281099844341	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAATAATAATAC	1780	False	NA	NA	False	NA	NA	NA	121588811	121598497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121589292_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
tx.21207	chr9	+	3851	5	ISM	ENSMUSG00000013419.8	ENSMUST00000093772.4	6353	6	2631	2264	-1353	424	3prime_fragment	FALSE	canonical	3	11	junction_4	4.38035386698381	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGACCACCTCAAGGGG	4698	False	NA	NA	False	NA	NA	NA	121591729	121598544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
tx.21208	chr9	-	1997	3	FSM	ENSMUSG00000038412.9	ENSMUST00000215007.2	1980	3	-14	-3	-13	3	multi-exon	FALSE	canonical	3	2040	junction_2	90	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTTGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	121686692	121677625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_121679389_121681556_121681676_121686577
tx.21209	chr9	-	524	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	738	970	-11	5	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	415	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTATTGAATATTGGTTTA	NA	False	NA	NA	False	NA	NA	NA	121686690	121678598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
tx.2121	chr10	-	4453	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-23	3336	-23	-3336	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	1530	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAAGACCATGTTTCTTT	203	False	NA	NA	False	NA	NA	NA	119075983	119038495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
tx.21210	chr9	-	2349	2	FSM	ENSMUSG00000066235.8	ENSMUST00000084743.7	2365	2	16	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	NA	False	NA	NA	NA	121825075	121810674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_121812890_121824941
tx.21211	chr9	-	2473	3	NIC	ENSMUSG00000066235.8	novel	2504	4	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	NA	False	NA	NA	NA	121825093	121810674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_121812890_121823910_121824017_121824941
tx.21212	chr9	+	5055	9	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	5	-7	intron_retention	FALSE	canonical	1	1	junction_3	11.9209636774885	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAAGCCGAGTCTGTGT	8241	False	NA	NA	False	NA	NA	NA	121946353	121998761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121963026_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
tx.21213	chr9	+	3328	8	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	-7	597	intron_retention	FALSE	canonical	3	20	junction_3	6.34388666033558	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8229	False	NA	NA	False	NA	NA	NA	121946341	121997138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
tx.21214	chr9	+	3180	7	FSM	ENSMUSG00000038145.18	ENSMUST00000118886.9	4811	7	1	1630	1	597	multi-exon	FALSE	canonical	3	10	junction_2	9.08142181721685	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8254	False	NA	NA	False	NA	NA	NA	121946366	121997138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121946474_121960958_121961009_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
tx.21215	chr9	+	3405	9	FSM	ENSMUSG00000038145.18	ENSMUST00000134949.8	1664	9	-58	-1683	6	597	multi-exon	FALSE	canonical	2	2	junction_3	11.6833214455479	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8242	False	NA	NA	False	NA	NA	NA	121946354	121997138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121946474_121960958_121961009_121961693_121961817_121963052_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
tx.21216	chr9	+	6072	5	ISM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	16554	1630	16105	597	3prime_fragment	FALSE	canonical	3	26	junction_3	4.7169905660283	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	121962922	121997138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
tx.21217	chr9	-	2619	13	FSM	ENSMUSG00000037949.9	ENSMUST00000042546.4	2653	13	16	18	1	0	multi-exon	FALSE	canonical	3	21	junction_1	6.44797556515911	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCTTCTCCAAGACTT	NA	False	NA	NA	False	NA	NA	NA	122123473	122004957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
tx.21218	chr9	+	3081	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	76	0	-46	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122180748	122210589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
tx.21219	chr9	+	2609	5	FSM	ENSMUSG00000032540.17	ENSMUST00000111497.5	2576	5	-33	0	-33	0	multi-exon	FALSE	canonical	2	13	junction_1	33.7073804974519	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122180761	122210589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_122180905_122204970_122205126_122206923_122207036_122207886_122208074_122208577
tx.2122	chr10	+	4925	23	ISM	ENSMUSG00000034813.20	ENSMUST00000147454.8	4520	24	78315	-640	-12234	17	3prime_fragment	FALSE	canonical	1	1	junction_7	2.51154359700751	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCATGTTTGGTGCATTG	NA	False	NA	NA	False	NA	NA	NA	119733617	119913061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_119733701_119765805_119765942_119767148_119767295_119774148_119774233_119778766_119778843_119780930_119781077_119811774_119811923_119814342_119814513_119821378_119821535_119822236_119822390_119835656_119835844_119836430_119836577_119846110_119846192_119853977_119854048_119855865_119856012_119871255_119871401_119874195_119874336_119874503_119874699_119885255_119885413_119885909_119886022_119890737_119890972_119908535_119908683_119911194
tx.21220	chr9	+	2908	6	NIC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	35.2363448728724	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTGGGTGAGCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	122180834	122210588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_122180905_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
tx.21221	chr9	+	3044	11	FSM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	2	3	2	-3	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGCGTTCCAGGATTT	NA	False	NA	NA	False	NA	NA	NA	122634605	122665396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
tx.21222	chr9	+	2968	11	FSM	ENSMUSG00000046603.17	ENSMUST00000136274.3	2909	11	-54	-5	3	-2	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCGTTCCAGGATTTC	NA	False	NA	NA	False	NA	NA	NA	122634606	122665397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647914_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
tx.21223	chr9	-	6508	6	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	7	-15	intron_retention	FALSE	canonical	3	118	junction_3	25.3929123969662	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTCTGACATCTATATA	NA	False	NA	NA	False	NA	NA	NA	122695043	122677989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_122683054_122683771_122683883_122685763_122686227_122686534_122686704_122690773_122691410_122694978
tx.21224	chr9	-	5766	2	FSM	ENSMUSG00000047036.9	ENSMUST00000216243.2	1064	2	-31	-4671	-31	-18	multi-exon	FALSE	canonical	3	188	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	NA	False	NA	NA	NA	122684476	122677992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_122683054_122683771
tx.21225	chr9	-	5900	6	FSM	ENSMUSG00000047036.9	ENSMUST00000056467.8	2961	6	47	-2986	47	-18	multi-exon	FALSE	canonical	3	67	junction_3	39.2356980312572	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	NA	False	NA	NA	NA	122691146	122677992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773
tx.21226	chr9	-	6263	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	8	-18	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	42.9434382518318	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	NA	False	NA	NA	NA	122695042	122677992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691410_122694978
tx.21227	chr9	-	6227	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	8	-18	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	36.0262250157977	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	NA	False	NA	NA	NA	122695042	122677992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694978
tx.21228	chr9	-	6177	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	7	-20	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	54.6310859818433	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGGCCTCTGACATCT	NA	False	NA	NA	False	NA	NA	NA	122695043	122677994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691325_122694978
tx.21229	chr9	+	2837	6	NNC	ENSMUSG00000063488.7	novel	4722	5	NA	NA	1139	1075	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	2.68328157299975	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTGTTCCACAATT	NA	False	NA	NA	False	NA	NA	NA	122715888	122725540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_122716131_122717488_122718015_122719723_122719872_122721382_122721457_122721749_122721813_122723756
tx.2123	chr10	-	4518	13	FSM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	34	2	34	-2	multi-exon	FALSE	canonical	3	54	junction_7	7.32006375199925	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCCCAGTCTGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	119948858	119919514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
tx.21230	chr9	+	2015	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	-10	5	-10	-5	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTTTGTTTTAAC	4864	False	NA	NA	False	NA	NA	NA	122752126	122760088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
tx.21231	chr9	-	910	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	5	2446	5	0	multi-exon	FALSE	canonical	3	36	junction_2	10	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTAGTCACTGTTCT	NA	False	NA	NA	False	NA	NA	NA	122780060	122776599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_122777174_122777989_122778135_122779869
tx.21232	chr9	+	4829	35	FSM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	29	0	-2	0	multi-exon	FALSE	canonical	3	157	junction_12	27.7337969778696	387	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	NA	False	NA	NA	NA	122780139	122847798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
tx.21233	chr9	+	1268	3	FSM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	-223	-4	-223	4	multi-exon	FALSE	canonical	3	26	junction_2	1.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATATGGAATTTGAGGG	NA	False	NA	NA	False	NA	NA	NA	122850167	122852556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_122850636_122851230_122851378_122851903
tx.21234	chr9	-	4788	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	-50	638	7	-638	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCCAGCTTTCACTGG	8721	False	NA	NA	False	NA	NA	NA	122942262	122895862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
tx.21235	chr9	-	5016	6	FSM	ENSMUSG00000025786.18	ENSMUST00000155778.8	1633	6	-34	-3349	4	-1841	multi-exon	FALSE	canonical	3	7	junction_4	109.405667129267	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTACTTTGGTTGTGA	8718	False	NA	NA	False	NA	NA	NA	122942265	122903215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122929327_122929658_122942060
tx.21236	chr9	-	2501	8	FSM	ENSMUSG00000025786.18	ENSMUST00000026892.15	2492	8	-8	-1	-8	1	multi-exon	FALSE	canonical	3	31	junction_6	109.785505158273	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTCTGCTCTCTCCCC	8730	False	NA	NA	False	NA	NA	NA	122942253	122905895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
tx.21237	chr9	-	2452	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	13	4522	-12	0	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8726	False	NA	NA	False	NA	NA	NA	122942257	122905896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
tx.21238	chr9	-	5375	8	NIC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	-12	-1854	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	122.011039982253	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTGATACTTCAGAGT	8726	False	NA	NA	False	NA	NA	NA	122942257	122903228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122941498_122941754_122942060
tx.21239	chr9	+	1029	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	22	2	-5	0	multi-exon	FALSE	canonical	3	1140	junction_3	103.377058995362	517	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGTTGTTAGCATCT	NA	False	NA	NA	False	NA	NA	NA	122942301	122965192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
tx.2124	chr10	-	4323	7	ISM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	31207	-1983	-74	1983	3prime_fragment	FALSE	canonical	2	13	junction_2	4.19324854180304	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATGACTCCCAGTGAC	NA	False	NA	NA	False	NA	NA	NA	120006357	119975569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222
tx.21240	chr9	+	3813	5	FSM	ENSMUSG00000025785.6	ENSMUST00000214741.2	1107	5	-2706	0	-1646	0	multi-exon	FALSE	canonical	3	1267	junction_1	78.9600373606801	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGTTGTTAGCATCT	2725	False	NA	NA	False	NA	NA	NA	122953803	122965192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
tx.21241	chr9	-	5320	9	FSM	ENSMUSG00000035498.11	ENSMUST00000039229.8	5310	9	-7	-3	-7	3	multi-exon	FALSE	canonical	2	3	junction_2	1.31695671910659	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCATTTGTTTAATGCT	6324	False	NA	NA	False	NA	NA	NA	123045110	122999885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_123002992_123004799_123004885_123006752_123007119_123009049_123009431_123011229_123011452_123012521_123012891_123014117_123014481_123018985_123019196_123044892
tx.21242	chr9	+	4875	8	FSM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	-24	-3	-24	3	multi-exon	FALSE	canonical	3	33	junction_2	3.69776545872708	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGACTGTCTTCTTTGAC	NA	False	NA	NA	False	NA	NA	NA	123307746	123350620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
tx.21243	chr9	+	178	2	Antisense	novelGene_ENSMUSG00000111340.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	123343272	123491254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_+_123343421_123491224
tx.21244	chr9	+	3539	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	19	0	19	0	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	543	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGTTGGTACTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	123358842	123421665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
tx.21245	chr9	-	3464	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	44	562	1	-562	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTGTTTACCCTCTGGT	NA	False	NA	NA	False	NA	NA	NA	123546646	123526638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
tx.21246	chr9	-	2328	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	-48	-1819	-48	1819	multi-exon	FALSE	canonical	3	27	junction_1	43.70608907489	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	124044817	124031168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
tx.21247	chr9	-	2887	3	NIC	ENSMUSG00000110834.2	novel	461	4	NA	NA	-47	1819	intron_retention	FALSE	canonical	3	93	junction_2	20	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	124044816	124031168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_124033817_124033999_124034127_124044704
tx.21248	chr9	-	1708	4	NNC	ENSMUSG00000110834.2	novel	461	4	NA	NA	-57	1819	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	29.8477618740315	51	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	124044826	124031168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_124032567_124033755_124033817_124033999_124034127_124044704
tx.21249	chr9	+	2195	13	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-427	1097	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	43.8003678320425	84	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	124195399	124202493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
tx.2125	chr10	-	3016	12	FSM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	79	2	7	-2	multi-exon	FALSE	canonical	2	13	junction_2	3.60440501847255	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTTTTGTTAACTCAG	NA	False	NA	NA	False	NA	NA	NA	120037485	119977554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430_120018614_120037231
tx.21250	chr9	+	2557	12	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-416	1097	intron_retention	FALSE	canonical	3	45	junction_1	43.6816053348329	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	124195410	124202493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
tx.21251	chr9	-	941	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	70	junction_1	0	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCCCGGGCGCAGGC	NA	False	NA	NA	False	NA	NA	NA	124198165	124195473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_-_124196190_124197940
tx.21252	chr9	+	1897	13	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-22	1097	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	49.060266226573	19	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	124196375	124202493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_124196748_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
tx.21253	chr9	+	1351	11	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-304	1097	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_3	32.5799017800852	19	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	124197624	124202493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
tx.21254	chrUn_JH584304v1	-	6521	2	Intergenic	novelGene_383	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	900	junction_1	0	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	58960	52195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54868_55111
tx.21255	chrUn_JH584304v1	-	4109	3	Intergenic	novelGene_384	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	828	junction_1	36	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATAGCTTTGAATTTTGT	NA	False	NA	NA	False	NA	NA	NA	57260	52666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111
tx.21256	chrUn_JH584304v1	-	3204	4	Intergenic	novelGene_385	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_3	99.6571901849313	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATAGCTTTGAATTTTG	NA	False	NA	NA	False	NA	NA	NA	57640	52667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985
tx.21257	chrUn_JH584304v1	-	2752	5	Intergenic	novelGene_392	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	340.077197118537	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACCATAGCTTTGAATT	NA	False	NA	NA	False	NA	NA	NA	59032	52670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563
tx.21258	chrUn_JH584304v1	-	2736	6	Intergenic	novelGene_387	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	319.825327327277	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59723	52668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_58563_58836_59591
tx.21259	chrUn_JH584304v1	-	2910	7	Intergenic	novelGene_391	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	256.761508451369	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59731	52668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
tx.2126	chr10	+	885	7	FSM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	14	5	14	-5	multi-exon	FALSE	canonical	3	514	junction_6	43.3628104870214	182	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTCTGTGTTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	120044668	120060817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
tx.21260	chrUn_JH584304v1	-	2853	7	Intergenic	novelGene_386	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	244.42818759073	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59721	52668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
tx.21261	chrUn_JH584304v1	-	3119	6	Intergenic	novelGene_388	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	313	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59724	52668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
tx.21262	chrUn_JH584304v1	-	2953	5	Intergenic	novelGene_389	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_3	261.431157286196	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59724	52668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563_58836_59591
tx.21263	chrUn_JH584304v1	-	2690	6	Intergenic	novelGene_390	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	309.65464634008	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59724	52668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
tx.21264	chrUn_JH584304v1	-	3184	7	Intergenic	novelGene_393	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	124	junction_4	312.424213032359	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59722	52690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
tx.21265	chrUn_JH584304v1	-	3188	2	Intergenic	novelGene_394	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGATCAACTCAGCCTC	NA	False	NA	NA	False	NA	NA	NA	59683	55739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_58836_59591
tx.21266	chrUn_MU069435v1	+	243	3	Intergenic	novelGene_395	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	139	junction_1	109.5	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTAGCAGTTGTA	NA	False	NA	NA	False	NA	NA	NA	3309	7357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_MU069435v1_+_3351_3591_3670_7233
tx.21267	chrUn_MU069435v1	-	257	2	Intergenic	novelGene_397	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGCCAGGCAGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	6762	4416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_MU069435v1_-_4528_6616
tx.21268	chrX	+	2621	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	56	359	56	-359	multi-exon	FALSE	canonical	3	23	junction_1	0	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTAGAAGTTACTTGGA	NA	False	NA	NA	False	NA	NA	NA	5959562	5966805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_5960459_5965080
tx.21269	chrX	-	1817	2	FSM	ENSMUSG00000073294.5	ENSMUST00000101698.4	1838	2	20	1	20	-1	multi-exon	FALSE	canonical	3	19	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTTTGTTGTGGTACA	NA	False	NA	NA	False	NA	NA	NA	5995453	5993273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_5994830_5995192
tx.2127	chr10	+	1159	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	-8	513	-8	-2	multi-exon	FALSE	canonical	3	990	junction_2	137	300	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTTGGAGTTTGACAT	NA	False	NA	NA	False	NA	NA	NA	120062966	120067974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_120063029_120063878_120064109_120067107
tx.21270	chrX	-	2033	2	FSM	ENSMUSG00000073293.5	ENSMUST00000103006.4	1775	2	-268	10	-268	-10	multi-exon	FALSE	canonical	3	9	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGAAATGCTGGAGTC	NA	False	NA	NA	False	NA	NA	NA	6085337	6080759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_6081851_6084395
tx.21271	chrX	+	8293	9	FSM	ENSMUSG00000068270.16	ENSMUST00000103005.10	4839	9	161	-3615	161	4	multi-exon	FALSE	canonical	2	6	junction_3	2.54644359843292	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCGTCTCTGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6312068	6549506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_6312316_6432846_6432999_6492882_6493018_6495245_6497710_6503009_6503072_6535713_6536491_6541154_6541336_6544276_6544547_6545501
tx.21272	chrX	-	8395	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	-6	1	-6	-1	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGTCTGTTTCTGAAG	NA	False	NA	NA	False	NA	NA	NA	7054959	7020049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
tx.21273	chrX	-	8720	14	NIC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	51	-1	combination_of_known_junctions	FALSE	canonical	2	11	junction_12	15.0816319177261	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGTCTGTTTCTGAAG	3182	False	NA	NA	False	NA	NA	NA	7185546	7020049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7182897_7183063_7185344
tx.21274	chrX	-	8805	15	NNC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	50	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	17.5557421270835	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTCAAGTCTGTTTCTG	3181	False	NA	NA	False	NA	NA	NA	7185547	7020052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7182897_7183063_7184640_7184728_7185344
tx.21275	chrX	-	7259	5	ISM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	22684	5	22643	-5	3prime_fragment	FALSE	canonical	3	49	junction_3	2.95803989154981	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTCAAGTCTGTTTCT	9385	False	NA	NA	False	NA	NA	NA	7032269	7020053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818
tx.21276	chrX	-	538	2	FSM	ENSMUSG00000063018.7	ENSMUST00000128571.2	540	2	6	-4	6	4	multi-exon	FALSE	canonical	3	121	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGCTTATTATTCTT	NA	False	NA	NA	False	NA	NA	NA	7289221	7278337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7278772_7289117
tx.21277	chrX	-	726	3	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	15500	-7	-6655	4	3prime_fragment	FALSE	canonical	3	36	junction_1	10.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGCTTATTATTCTT	NA	False	NA	NA	False	NA	NA	NA	7295882	7278337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_7278772_7290368_7290524_7295745
tx.21278	chrX	-	2223	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	130	0	130	0	multi-exon	FALSE	canonical	3	186	junction_12	25.3807721267498	308	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTTAGGCATGGATT	NA	False	NA	NA	False	NA	NA	NA	7471626	7460047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
tx.21279	chrX	+	1888	2	NNC	ENSMUSG00000031144.16	novel	2591	7	NA	NA	5267	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTCCCGGCTCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	7515414	7519492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_7515886_7518075
tx.2128	chr10	+	1294	4	FSM	ENSMUSG00000020224.16	ENSMUST00000220107.2	767	4	-20	-507	12	0	multi-exon	FALSE	canonical	3	16	junction_3	586.90373997786	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTTTGACATTT	NA	False	NA	NA	False	NA	NA	NA	120062986	120067976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_120063029_120063878_120064109_120066314_120066468_120067107
tx.21280	chrX	+	2717	8	ISM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	121	3	-91	2	intron_retention	FALSE	canonical	3	64	junction_3	5.92814112035612	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTATTGTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	7523619	7534194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510
tx.21281	chrX	+	3354	9	NNC	ENSMUSG00000031145.16	novel	2301	9	NA	NA	-82	661	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	24.9336619853563	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCCTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	7523628	7535086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_7523740_7524859_7524946_7525774_7525959_7529409_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
tx.21282	chrX	+	2174	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	119	8	-93	-3	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTATTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	7523617	7534189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
tx.21283	chrX	+	3194	8	FSM	ENSMUSG00000031145.16	ENSMUST00000129662.3	2376	8	-1138	320	-77	-87	multi-exon	FALSE	canonical	3	64	junction_2	5.91435472699556	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCCTGGCTTCTTGGATC	NA	False	NA	NA	False	NA	NA	NA	7523633	7534105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
tx.21284	chrX	-	1124	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	30	3	12	-3	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	753	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATAAGTTAACTTTT	NA	False	NA	NA	False	NA	NA	NA	7537599	7534182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
tx.21285	chrX	+	3510	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	68	1	68	-1	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	515	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCATTTGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	7563437	7576500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
tx.21286	chrX	+	4575	10	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	67	-34	intron_retention	FALSE	canonical	3	223	junction_8	19.0580659182198	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563436	7576467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
tx.21287	chrX	+	1579	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	15	15	1	9	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTGACCTCAAGGGTG	4021	False	NA	NA	False	NA	NA	NA	7588470	7594430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
tx.21288	chrX	+	1551	2	ISM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	118	4	118	-4	intron_retention	FALSE	canonical	3	906	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTTTGGCCTCCTGTGT	1288	False	NA	NA	False	NA	NA	NA	7594795	7597299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_7595002_7595954
tx.21289	chrX	+	1216	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	122	1	122	-1	multi-exon	FALSE	canonical	3	755	junction_2	75.5	503	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGCCTCCTGTGTGAA	1292	False	NA	NA	False	NA	NA	NA	7594799	7597302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7595002_7595954_7596173_7596506
tx.2129	chr10	+	1542	3	FSM	ENSMUSG00000020224.16	ENSMUST00000130198.3	1463	3	-81	2	3	-2	multi-exon	FALSE	canonical	3	35	junction_1	477.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTTGGAGTTTGACAT	NA	False	NA	NA	False	NA	NA	NA	120063009	120067974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_120063455_120063878_120064109_120067107
tx.21290	chrX	-	3310	5	ISM	ENSMUSG00000031150.14	ENSMUST00000033490.13	3658	10	4062	0	2928	0	3prime_fragment	FALSE	canonical	3	34	junction_4	2.48746859276655	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	1870	False	NA	NA	False	NA	NA	NA	7603518	7597952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930
tx.21291	chrX	-	3895	11	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_10	12.7357763799464	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	7617142	7597952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7606587_7606649_7616836
tx.21292	chrX	-	3836	10	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_9	8.46926177784867	34	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	7617144	7597952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7616836
tx.21293	chrX	+	3266	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	9	2	3	-1	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	395	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGTCTCCCGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	7628905	7641439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
tx.21294	chrX	+	4184	9	ISM	ENSMUSG00000000134.18	ENSMUST00000101695.9	2989	10	155	-4	109	0	3prime_fragment	FALSE	canonical	3	276	junction_4	18.5569225627527	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	7630434	7641440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
tx.21295	chrX	+	2921	25	FSM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	231	4	1	0	multi-exon	FALSE	canonical	2	42	junction_24	10.7256669049321	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3261	False	NA	NA	False	NA	NA	NA	7656234	7686802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
tx.21296	chrX	+	4683	7	NIC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	-189	-583	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.11890797254573	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGACTCTGTGGATT	NA	False	NA	NA	False	NA	NA	NA	7688338	7703936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_7688630_7688839_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7702504
tx.21297	chrX	+	3365	7	NNC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	-20	-584	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	7.80313327381308	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTACTGACTCTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	7688507	7703935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_7688630_7689987_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7702504
tx.21298	chrX	+	4706	6	FSM	ENSMUSG00000009731.5	ENSMUST00000009875.5	5287	6	-3	584	-3	-584	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTACTGACTCTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	7688524	7703935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7702504
tx.21299	chrX	+	2992	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-70	1337	-70	-1	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	548	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTCTATTCTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	7707999	7741528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
tx.213	chr1	-	4075	20	FSM	ENSMUSG00000003134.11	ENSMUST00000054462.11	4451	20	6	370	6	5	multi-exon	TRUE	canonical	3	38	junction_12	7.9882184715386	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTAAAATGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	39517830	39410942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
tx.2130	chr10	-	3737	5	FSM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	-20	-7	-20	7	multi-exon	FALSE	canonical	1	2	junction_1	7.32717544487642	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTCAGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	120312394	120197172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311857
tx.21300	chrX	+	4386	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-51	-17	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGGCTGTGATGCTTAC	NA	False	NA	NA	False	NA	NA	NA	7708018	7742842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
tx.21301	chrX	+	2647	9	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	78	junction_1	132.334566534976	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGCAACTCTATTCT	NA	False	NA	NA	False	NA	NA	NA	7708308	7741522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
tx.21302	chrX	+	2542	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-2	3	-2	2	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAACTCTATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	7708318	7741526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
tx.21303	chrX	+	2051	6	FSM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	-6	0	-6	0	multi-exon	FALSE	canonical	3	69	junction_5	7.30479294709987	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGCCATTTATAGAA	NA	False	NA	NA	False	NA	NA	NA	7744534	7749671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7744796_7744922_7745033_7745866_7745918_7747486_7747860_7748311_7748489_7748592
tx.21304	chrX	+	2349	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	280	465	-2	0	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGTGTAGCTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	7750546	7760266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
tx.21305	chrX	-	1182	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	29	-63	29	-1	multi-exon	FALSE	canonical	3	349	junction_6	78.4950458450864	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	615	False	NA	NA	False	NA	NA	NA	7765189	7760758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
tx.21306	chrX	-	1087	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	15	2	15	-2	multi-exon	FALSE	canonical	3	139	junction_6	154.654902569847	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGAGGCTTGAGTGCT	311	False	NA	NA	False	NA	NA	NA	7765493	7760759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
tx.21307	chrX	+	895	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	2	1484	2	-103	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	293	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1191	False	NA	NA	False	NA	NA	NA	7765597	7773106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
tx.21308	chrX	+	987	3	FSM	ENSMUSG00000039278.11	ENSMUST00000041096.4	2193	3	31	1175	31	-1175	multi-exon	FALSE	canonical	3	43	junction_1	26.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGTCTGAGCGCCCT	NA	False	NA	NA	False	NA	NA	NA	7786091	7789474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7786284_7788286_7788754_7789146
tx.21309	chrX	+	1639	2	ISM	ENSMUSG00000039278.11	ENSMUST00000041096.4	2193	3	1383	1174	1383	-1174	3prime_fragment	FALSE	canonical	3	96	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCTGAGCGCCCTG	NA	False	NA	NA	False	NA	NA	NA	7787443	7789475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_7788754_7789146
tx.2131	chr10	-	1619	4	NNC	ENSMUSG00000056758.15	novel	3389	2	NA	NA	-547	8574	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.40870359029762	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAAGTGAATGCGTTTT	NA	False	NA	NA	False	NA	NA	NA	120312921	120297620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_120298038_120298568_120298620_120309156_120309244_120311857
tx.21310	chrX	-	1064	2	FSM	ENSMUSG00000031160.5	ENSMUST00000033500.5	1077	2	5	8	5	-8	multi-exon	FALSE	canonical	3	21	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACTAAATCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	7794841	7790522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7791453_7794707
tx.21311	chrX	-	4075	29	FSM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	66	1	15	-1	multi-exon	FALSE	canonical	3	77	junction_28	71.4613049995933	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAAGTGCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	7814062	7796361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
tx.21312	chrX	-	4003	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	63	3	12	-1	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	502	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAAGTGCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	7814065	7796361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
tx.21313	chrX	-	959	4	NNC	ENSMUSG00000031163.3	novel	673	4	NA	NA	2658	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	9.28559218478941	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCACTCTTGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	7882073	7870438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_7870742_7871941_7872098_7881456_7881595_7881711
tx.21314	chrX	+	1867	3	NIC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	-233	180	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	48	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTTGCCATGATT	7418	False	NA	NA	False	NA	NA	NA	7915177	7939378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_7915823_7936874_7937304_7938585
tx.21315	chrX	+	1713	4	FSM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	-264	0	-188	0	multi-exon	FALSE	canonical	3	19	junction_1	38.6091526281874	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	7463	False	NA	NA	False	NA	NA	NA	7915222	7939198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7915823_7926454_7926526_7936874_7937304_7938585
tx.21316	chrX	+	1317	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-36	172	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTTAAAAATCCCTTG	NA	False	NA	NA	False	NA	NA	NA	7917793	7939370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_7917897_7936874_7937304_7938585
tx.21317	chrX	+	1375	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-10	-188	-10	185	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGCCATGATTAGTGA	NA	False	NA	NA	False	NA	NA	NA	7917819	7939383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
tx.21318	chrX	-	2849	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	-67	-4	-12	4	multi-exon	TRUE	canonical	3	73	junction_5	15.551205741035	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGATTTGGGAGATTG	7288	False	NA	NA	False	NA	NA	NA	7940564	7927669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
tx.21319	chrX	-	2717	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	137	262	-2	2	multi-exon	FALSE	canonical	3	87	junction_5	11.3947356265953	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTGAGATTTGGGAGAT	6990	False	NA	NA	False	NA	NA	NA	7940862	7927671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
tx.2132	chr10	+	1603	11	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_8	31.0845620847391	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCTTCAAATGATTGG	NA	False	NA	NA	False	NA	NA	NA	120359239	120374524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690_120373794_120374077
tx.21320	chrX	-	3673	3	FSM	ENSMUSG00000039231.19	ENSMUST00000127617.2	1166	3	11	-2518	11	-502	multi-exon	FALSE	canonical	3	73	junction_2	20	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGATTGTTTTGTTTTGT	7311	False	NA	NA	False	NA	NA	NA	7940541	7934149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7937490_7938561_7938708_7940354
tx.21321	chrX	-	2405	12	FSM	ENSMUSG00000031165.7	ENSMUST00000033505.7	2114	12	-1	-290	-1	290	multi-exon	FALSE	canonical	2	6	junction_8	4.36552989219744	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTATGATTTGGGAGA	7440	False	NA	NA	False	NA	NA	NA	7956738	7947401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7948229_7951744_7951860_7952080_7952536_7952802_7952957_7953168_7953212_7953999_7954175_7954962_7955017_7955112_7955155_7955274_7955378_7955494_7955582_7956082_7956224_7956529
tx.21322	chrX	-	3945	9	FSM	ENSMUSG00000031166.14	ENSMUST00000033506.13	4183	9	236	2	-61	0	multi-exon	TRUE	canonical	3	18	junction_8	7.92839044194974	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGCCTCTCTTCATT	7157	False	NA	NA	False	NA	NA	NA	7998811	7989541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525
tx.21323	chrX	-	4886	6	NIC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	11	1	intron_retention	FALSE	canonical	3	529	junction_1	272.003970559255	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTGTTACACGTAT	6510	False	NA	NA	False	NA	NA	NA	8011987	8005215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
tx.21324	chrX	-	4841	6	NIC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	764	junction_1	193.394312222464	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGTGTGTTACACGTA	6551	False	NA	NA	False	NA	NA	NA	8011946	8005216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
tx.21325	chrX	-	1173	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	161	4	3	-2	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	350	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATAATGCTTTT	6539	False	NA	NA	False	NA	NA	NA	8011958	8008601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
tx.21326	chrX	-	1176	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	54	-5	3	-2	multi-exon	FALSE	canonical	3	529	junction_2	255.122192945524	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATAATGCTTTT	6539	False	NA	NA	False	NA	NA	NA	8011958	8008601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
tx.21327	chrX	-	2400	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	248	0	25	0	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATTTCTCTATTTC	NA	False	NA	NA	False	NA	NA	NA	8042172	8020710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
tx.21328	chrX	-	1122	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	619	2	5	0	multi-exon	FALSE	canonical	3	751	junction_2	18.0190871022924	378	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	NA	False	NA	NA	NA	8059132	8051569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
tx.21329	chrX	-	1831	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	10	-2	0	0	multi-exon	TRUE	canonical	3	57	junction_2	6.61857655055493	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGGTTTTTTGGTTTTT	1998	False	NA	NA	False	NA	NA	NA	8072730	8060086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
tx.2133	chr10	+	1730	7	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_6	29.3338068143605	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCTTCAAATGATTGG	NA	False	NA	NA	False	NA	NA	NA	120359218	120374524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120373440
tx.21330	chrX	-	1844	13	NNC	ENSMUSG00000031169.14	novel	1839	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	19.2476549798208	10	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTCGGTTTTTTGGTTTT	1998	False	NA	NA	False	NA	NA	NA	8072730	8060087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067811_8069385_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
tx.21331	chrX	-	1666	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	-10	0	1	0	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	NA	False	NA	NA	NA	8118644	8106658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
tx.21332	chrX	+	5143	3	FSM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	-68	1	-68	-1	multi-exon	FALSE	canonical	3	33	junction_2	9.5	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCATTTTATTTCTTG	NA	False	NA	NA	False	NA	NA	NA	9138926	9179488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_9139474_9148235_9148499_9175155
tx.21333	chrX	-	1159	2	Intergenic	novelGene_399	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGGTGGTTGCGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	9198896	9195214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_9196165_9198687
tx.21334	chrX	-	7756	3	ISM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	82	0	82	0	intron_retention	FALSE	canonical	3	289	junction_2	7	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTCTGGTTGATCC	NA	False	NA	NA	False	NA	NA	NA	9529160	9520505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_9522303_9522618_9522697_9523279
tx.21335	chrX	-	2128	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	48	0	48	0	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTCTGGTTGATCC	NA	False	NA	NA	False	NA	NA	NA	9529194	9520505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
tx.21336	chrX	-	2722	17	FSM	ENSMUSG00000031174.18	ENSMUST00000073392.11	2926	17	201	3	14	-3	multi-exon	FALSE	canonical	3	77	junction_1	17.609368067878	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	10082958	10024457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
tx.21337	chrX	-	2693	17	FSM	ENSMUSG00000031174.18	ENSMUST00000115533.8	2739	17	199	-153	12	-3	multi-exon	FALSE	canonical	3	37	junction_1	23.3939595569027	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	10082960	10024457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_10025089_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
tx.21338	chrX	+	1761	8	FSM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	-30	2	-30	-2	multi-exon	FALSE	canonical	3	58	junction_5	9.20736173961258	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGTGGTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	10351366	10462842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
tx.21339	chrX	+	1774	2	FSM	ENSMUSG00000008035.13	ENSMUST00000144356.8	447	2	-14	-1313	-8	7	multi-exon	FALSE	canonical	3	13	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACAAGTGTGTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	10581243	10585936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_10581307_10584225
tx.2134	chr10	-	4646	11	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	38.3198382042513	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	120815245	120759317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120813688
tx.21340	chrX	+	1931	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	97	-9	19	9	multi-exon	FALSE	canonical	3	265	junction_1	0	357	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAAGTGTGTGTTGCTCT	1576	False	NA	NA	False	NA	NA	NA	10583725	10585938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_10583944_10584225
tx.21341	chrX	-	4902	12	ISM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	22460	2	22460	1	3prime_fragment	FALSE	canonical	3	55	junction_8	42.9531745812992	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	NA	False	NA	NA	NA	11924332	11902980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
tx.21342	chrX	-	5324	12	ISM	ENSMUSG00000040363.16	ENSMUST00000065143.14	6839	15	21936	2	21936	1	3prime_fragment	FALSE	canonical	3	70	junction_8	40.7128627104831	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	NA	False	NA	NA	NA	11924856	11902980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582
tx.21343	chrX	-	6951	15	FSM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	-12	2	-12	1	multi-exon	FALSE	canonical	3	55	junction_8	42.398077064597	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	NA	False	NA	NA	NA	11946804	11902980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
tx.21344	chrX	-	6859	15	FSM	ENSMUSG00000040363.16	ENSMUST00000065143.14	6839	15	-22	2	-22	1	multi-exon	FALSE	canonical	3	70	junction_8	40.8733733995767	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	NA	False	NA	NA	NA	11946814	11902980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
tx.21345	chrX	-	6806	14	FSM	ENSMUSG00000040363.16	ENSMUST00000124033.8	6785	14	-23	2	-23	1	multi-exon	FALSE	canonical	3	23	junction_10	49.0641410892762	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	NA	False	NA	NA	NA	11946815	11902980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
tx.21346	chrX	-	6165	15	NNC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-36	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	49.2654720336046	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	NA	False	NA	NA	NA	11946828	11902980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946764
tx.21347	chrX	-	2281	7	ISM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	32831	3	32831	0	3prime_fragment	FALSE	canonical	3	150	junction_3	14.7129950119689	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAATTGAAGTACTTTGC	NA	False	NA	NA	False	NA	NA	NA	11913961	11902981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661
tx.21348	chrX	-	6887	14	FSM	ENSMUSG00000040363.16	ENSMUST00000115512.9	6887	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	50.3691696818388	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAGTACTTTGCATC	NA	False	NA	NA	False	NA	NA	NA	11946792	11902978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
tx.21349	chrX	+	2037	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	-16	303	-16	-303	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	1037	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCACTGCAATTCTGAA	NA	False	NA	NA	False	NA	NA	NA	12454023	12482985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
tx.2135	chr10	-	4757	13	FSM	ENSMUSG00000048661.15	ENSMUST00000119944.8	4743	13	-14	0	-14	0	multi-exon	FALSE	canonical	3	97	junction_12	16.3112095062125	256	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	120815251	120759317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
tx.21350	chrX	-	3147	7	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	81.2617512869506	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	NA	False	NA	NA	NA	12539806	12521117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_12523275_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
tx.21351	chrX	-	2597	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	102	0	102	0	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	NA	False	NA	NA	NA	12539805	12521117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
tx.21352	chrX	-	6771	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	57	-3	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	19.1554750278713	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCAACTCTCTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	12628255	12541610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
tx.21353	chrX	-	6713	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-22	-2	combination_of_known_splicesites	TRUE	canonical	2	2	junction_10	22.6367163578842	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCAACTCTCTTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	12628334	12541609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
tx.21354	chrX	-	6902	31	FSM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	57	4	57	-4	multi-exon	FALSE	canonical	3	55	junction_7	16.6631996393917	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACCAACTCTCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	12628255	12541611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
tx.21355	chrX	-	5122	30	ISM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	58	4375	58	5	5prime_fragment	FALSE	canonical	3	55	junction_6	16.6138203002884	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGCTTTTTGGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	12628254	12545982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
tx.21356	chrX	-	1961	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	57	-19578	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.536133759253	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTATGAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	12628255	12594945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_12595287_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
tx.21357	chrX	-	1985	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-18	-34245	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	26.949768088056	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATAATAGGTCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	12628330	12609612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_12609903_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
tx.21358	chrX	+	11207	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-115	-901	multi-exon	TRUE	canonical	3	31	junction_2	269.212009130561	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCTTTGTTTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	12908138	13038666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21359	chrX	+	9508	45	FSM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	-14	2393	2	1037	multi-exon	FALSE	canonical	3	58	junction_1	219.011541405002	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	809	False	NA	NA	False	NA	NA	NA	12937738	13037174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.2136	chr10	+	2240	10	FSM	ENSMUSG00000020218.12	ENSMUST00000020439.11	2294	10	46	8	-18	-3	multi-exon	FALSE	canonical	3	14	junction_1	5.2704627669473	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACTGTATGGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	120869910	120936547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_120870396_120870870_120871011_120911150_120911260_120918030_120918172_120919792_120919889_120920813_120920910_120926015_120926112_120931903_120932000_120932545_120932642_120935662
tx.21360	chrX	+	10114	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	1	1035	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	808	False	NA	NA	False	NA	NA	NA	12937737	13037172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21361	chrX	+	10100	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	1035	intron_retention	FALSE	canonical	3	336	junction_13	184.407752028662	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	807	False	NA	NA	False	NA	NA	NA	12937736	13037172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21362	chrX	+	9636	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	1037	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	807	False	NA	NA	False	NA	NA	NA	12937736	13037174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21363	chrX	+	9909	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	1	1326	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGGTTGTATTTTTTA	808	False	NA	NA	False	NA	NA	NA	12937737	13037463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21364	chrX	+	8603	30	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	51671	904	-5875	-904	3prime_fragment	FALSE	canonical	3	671	junction_4	159.685570949789	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGGCTTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	12989423	13038663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21365	chrX	+	8141	23	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	60642	3	2829	-3	3prime_fragment	FALSE	canonical	3	785	junction_6	145.164141919324	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	12998394	13039564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21366	chrX	+	5097	19	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	68637	2393	10824	1037	3prime_fragment	FALSE	canonical	3	785	junction_2	139.748274575801	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	NA	False	NA	NA	False	NA	NA	NA	13006389	13037174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21367	chrX	+	5941	15	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	73673	905	-15670	-905	3prime_fragment	FALSE	canonical	3	952	junction_4	87.8641402556079	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGGCTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	13011425	13038662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21368	chrX	+	6485	13	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	79762	3	-9581	-3	3prime_fragment	FALSE	canonical	3	952	junction_2	83.9660976558727	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	13017514	13039564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21369	chrX	+	5971	11	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	84684	3	-4659	-3	3prime_fragment	FALSE	canonical	3	1026	junction_7	67.7468818470636	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	13022436	13039564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.2137	chr10	-	5394	13	NIC	ENSMUSG00000052302.7	novel	5695	12	NA	NA	-151	-333	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.721687836487032	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCGGAGTCATTTCC	NA	False	NA	NA	False	NA	NA	NA	121187334	121100057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_121103530_121107899_121108107_121111632_121111773_121115002_121115116_121124784_121124891_121130493_121130663_121132596_121132766_121137841_121138028_121140250_121140377_121142060_121142127_121142726_121142789_121183009_121183175_121186921
tx.21370	chrX	+	4514	5	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	90128	4	785	-4	3prime_fragment	FALSE	canonical	3	1026	junction_1	82.8986580108508	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTGGGTTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	13027880	13039563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.21371	chrX	+	4447	4	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	93195	4	3852	-4	3prime_fragment	FALSE	canonical	3	1088	junction_2	61.7215971565509	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTGGGTTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	13030947	13039563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13031108_13031510_13031724_13032870_13032967_13035585
tx.21372	chrX	+	4250	3	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	93796	3	4453	-3	3prime_fragment	FALSE	canonical	3	1088	junction_1	53.5	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	13031548	13039564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13031724_13032870_13032967_13035585
tx.21373	chrX	+	4672	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	18	2	18	-2	multi-exon	TRUE	canonical	3	179	junction_1	98.1322449554681	354	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTCGTTTGATTGTCC	NA	False	NA	NA	False	NA	NA	NA	13147226	13160289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
tx.21374	chrX	+	4443	15	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	3945	3	-2369	-3	3prime_fragment	FALSE	canonical	3	213	junction_1	88.4012189407142	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	NA	False	NA	NA	NA	13151153	13160288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
tx.21375	chrX	+	4370	14	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	5089	3	-1225	-3	3prime_fragment	FALSE	canonical	3	219	junction_1	83.7977277233556	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	NA	False	NA	NA	NA	13152297	13160288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
tx.21376	chrX	+	4261	13	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	6256	3	-58	-3	3prime_fragment	FALSE	canonical	3	259	junction_2	77.4185952397025	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	NA	False	NA	NA	NA	13153464	13160288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
tx.21377	chrX	+	3635	8	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	7859	1	1044	-1	3prime_fragment	FALSE	canonical	3	337	junction_2	59.7559663147044	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCGTTTGATTGTCCA	NA	False	NA	NA	False	NA	NA	NA	13155067	13160290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
tx.21378	chrX	-	4557	25	FSM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	-212	3915	-18	336	multi-exon	FALSE	canonical	2	3	junction_8	34.3371508799952	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAATGCCTTTGGGTC	NA	False	NA	NA	False	NA	NA	NA	13712992	13387233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
tx.21379	chrX	-	4648	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-196	3914	-39	337	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAATGCCTTTGGGTCC	NA	False	NA	NA	False	NA	NA	NA	13713013	13387232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
tx.2138	chr10	+	3858	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	1	-4	1	0	multi-exon	FALSE	canonical	3	144	junction_4	13.2731878157773	257	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATGTGTCCTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	121200995	121233154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
tx.21380	chrX	-	4623	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	-230	-336	-51	336	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAATGCCTTTGGGTC	NA	False	NA	NA	False	NA	NA	NA	13713025	13387233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
tx.21381	chrX	+	1982	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	110	2075	110	-2075	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	224	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTGTAGCATCCAAT	NA	False	NA	NA	False	NA	NA	NA	16486046	16551982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
tx.21382	chrX	-	2289	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68054	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_13	14.945265027612	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGACCATTTTATTGTA	NA	False	NA	NA	False	NA	NA	NA	17117553	16998287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
tx.21383	chrX	-	2500	4	FSM	ENSMUSG00000025040.14	ENSMUST00000177213.8	1032	4	-508	-960	104	0	multi-exon	TRUE	canonical	3	209	junction_3	16.9901932498329	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	False	NA	NA	False	NA	NA	NA	17438388	17422802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541
tx.21384	chrX	-	1877	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	106	0	34	0	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	False	NA	NA	False	NA	NA	NA	17438458	17422802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
tx.21385	chrX	+	5623	30	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-30	-419	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	47.6051186808053	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	18028845	18145756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
tx.21386	chrX	+	5474	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	25	419	25	-419	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	18028838	18145756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
tx.21387	chrX	+	5339	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	30	-414	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	40.8616387994563	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTGTTTGAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	18028843	18145761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
tx.21388	chrX	+	5490	29	FSM	ENSMUSG00000037369.18	ENSMUST00000052368.9	5935	29	26	419	26	-419	multi-exon	FALSE	canonical	3	24	junction_28	44.1203710643637	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	18028839	18145756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
tx.21389	chrX	+	5758	29	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	30	-151	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	44.6303982614943	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGACCTAAAATGTCAGA	NA	False	NA	NA	False	NA	NA	NA	18028843	18146024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
tx.2139	chr10	+	3620	12	ISM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	9178	-4	-75	0	3prime_fragment	FALSE	canonical	3	144	junction_2	10.1655714534504	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATGTGTCCTTTGTTTTT	7422	False	NA	NA	False	NA	NA	NA	121210172	121233154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
tx.21390	chrX	+	3295	13	ISM	ENSMUSG00000037369.18	ENSMUST00000225336.2	3219	17	7826	-903	6604	-151	3prime_fragment	FALSE	canonical	3	166	junction_2	27.5866060495548	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGACCTAAAATGTCAGA	NA	False	NA	NA	False	NA	NA	NA	18120360	18146024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
tx.21391	chrX	+	4716	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	-50	-2460	-50	2460	multi-exon	FALSE	canonical	3	12	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGGAAGTGGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	19925748	19966220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_19927448_19963203
tx.21392	chrX	-	9404	17	FSM	ENSMUSG00000037341.15	ENSMUST00000072451.11	2512	17	7	-6899	7	6898	multi-exon	TRUE	canonical	0	0	junction_11	2.05775970414429	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGCTAACGAGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	20158039	19965094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_19972454_19974913_19975020_19986758_19986842_19998009_19998074_20005151_20005212_20025053_20025208_20025870_20025983_20028166_20028281_20028382_20028472_20028672_20028779_20031168_20031311_20032246_20032353_20052298_20052412_20055082_20055160_20068948_20069027_20071604_20071805_20157598
tx.21393	chrX	+	4331	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	85	1	7	-1	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	651	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTGATGTCTATACT	NA	False	NA	NA	False	NA	NA	NA	20230804	20267091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
tx.21394	chrX	+	4798	13	NNC	ENSMUSG00000037315.16	novel	2472	10	NA	NA	-351	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	41.5759011394288	53	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	NA	False	NA	NA	NA	20291575	20386178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_20291651_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
tx.21395	chrX	+	4834	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	32	0	3	0	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	284	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	NA	False	NA	NA	NA	20291958	20386178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
tx.21396	chrX	-	575	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	333	0	333	0	multi-exon	FALSE	canonical	3	2198	junction_1	70	464	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	20483525	20481564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_20481782_20481952_20482084_20483298
tx.21397	chrX	+	3102	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-16	1	combination_of_known_splicesites	TRUE	canonical	3	25	junction_4	104.114689072799	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	539	False	NA	NA	False	NA	NA	NA	20484005	20517128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
tx.21398	chrX	+	3405	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115374.8	3564	24	147	12	-14	1	multi-exon	FALSE	canonical	3	108	junction_4	93.2983708932913	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	541	False	NA	NA	False	NA	NA	NA	20484007	20517128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
tx.21399	chrX	+	3174	23	FSM	ENSMUSG00000031060.17	ENSMUST00000084383.10	3172	23	-14	12	-14	1	multi-exon	FALSE	canonical	3	151	junction_9	72.7799809002085	285	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	541	False	NA	NA	False	NA	NA	NA	20484007	20517128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
tx.214	chr1	+	1710	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-20	1472	-20	0	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	624	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTCCCATGGATGAA	NA	False	NA	NA	False	NA	NA	NA	39574862	39584482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
tx.2140	chr10	-	3492	5	FSM	ENSMUSG00000025795.9	ENSMUST00000026902.9	3522	5	27	3	27	-3	multi-exon	FALSE	canonical	3	44	junction_2	3.60555127546399	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTATGTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	121312225	121246257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_121248991_121250262_121250373_121251970_121252194_121252989_121253098_121311907
tx.21400	chrX	+	3475	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	95	474	0	-474	multi-exon	TRUE	canonical	3	1167	junction_1	494.469940036804	1852	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	NA	False	NA	NA	NA	20524659	20548944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
tx.21401	chrX	+	3572	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	25	474	25	-474	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	3902	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	NA	False	NA	NA	NA	20529161	20548944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
tx.21402	chrX	+	3248	16	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	35	junction_2	413.425602604494	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2327	False	NA	NA	False	NA	NA	NA	20554659	20566119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
tx.21403	chrX	+	3580	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	1538	junction_13	90.6073523931271	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2325	False	NA	NA	False	NA	NA	NA	20554657	20566119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
tx.21404	chrX	+	3116	16	FSM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	1	3	1	-3	multi-exon	FALSE	canonical	3	1538	junction_15	84.886172149663	2594	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2325	False	NA	NA	False	NA	NA	NA	20554657	20566116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
tx.21405	chrX	+	3210	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1538	junction_14	85.3986151491214	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2319	False	NA	NA	False	NA	NA	NA	20554651	20566119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
tx.21406	chrX	+	3657	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	9	0	intron_retention	FALSE	canonical	3	1538	junction_12	91.5752195374564	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2333	False	NA	NA	False	NA	NA	NA	20554665	20566119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
tx.21407	chrX	+	3377	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1538	junction_14	87.5299365698294	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2323	False	NA	NA	False	NA	NA	NA	20554655	20566119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
tx.21408	chrX	+	2335	16	NNC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	97.0937691100721	179	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTTTATTTTGC	6295	False	NA	NA	False	NA	NA	NA	20714803	20726759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724634_20724752_20724980_20725113_20725923_20726059_20726217
tx.21409	chrX	+	4791	6	NNC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	2853	13	intron_retention	FALSE	non_canonical	0	0	junction_2	80.5143465476806	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCTTCCCGACTCTT	410	False	NA	NA	False	NA	NA	NA	20720221	20726771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_20724028_20724116_20724164_20724634_20724752_20724980_20725113_20725923_20726059_20726217
tx.2141	chr10	-	4947	20	NIC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	107	junction_11	18.1066400945196	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTGCTTTTGTA	3915	False	NA	NA	False	NA	NA	NA	121422655	121382361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
tx.21410	chrX	-	4160	12	NIC	ENSMUSG00000037217.16	novel	3261	13	NA	NA	25	1	intron_retention	FALSE	canonical	3	43	junction_8	5.56405227203613	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTGTGCTTCTTGGTA	NA	False	NA	NA	False	NA	NA	NA	20787218	20726752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
tx.21411	chrX	-	3178	13	FSM	ENSMUSG00000037217.16	ENSMUST00000115345.8	3261	13	79	4	-7	0	multi-exon	FALSE	canonical	3	14	junction_1	11.6198465279595	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCTGTGCTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	20787164	20726753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_20727811_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
tx.21412	chrX	+	874	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	9	0	9	0	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	NA	False	NA	NA	NA	20736413	20740972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
tx.21413	chrX	+	809	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	22	2	22	0	multi-exon	FALSE	canonical	3	257	junction_1	211.264384125673	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	NA	False	NA	NA	NA	20736481	20740972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
tx.21414	chrX	-	920	3	ISM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	3442	77	-499	-77	intron_retention	FALSE	canonical	3	117	junction_2	8	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTAAGATTCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	20794352	20791769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_20791999_20793519_20793632_20793773
tx.21415	chrX	-	1374	8	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	11	-77	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	38.4819066946681	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTAAGATTCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	20797783	20791769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_20791999_20793519_20793632_20793773_20793963_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
tx.21416	chrX	-	2779	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	8	761	8	-761	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTATTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	20816839	20800394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
tx.21417	chrX	-	592	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	22	261	-4	0	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	20828234	20818161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
tx.21418	chrX	+	1057	5	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-6	612	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	30.3016088681773	17	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGGTCATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	20828346	20853588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852217_20852400_20853321
tx.21419	chrX	+	2488	3	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-6	608	intron_retention	FALSE	canonical	3	138	junction_1	14	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	NA	False	NA	NA	NA	20828346	20853584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_20828835_20833967_20834048_20851664
tx.2142	chr10	-	3001	21	FSM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	21	2	11	-2	multi-exon	FALSE	canonical	3	107	junction_12	17.7	232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTGCTTTTGTA	3899	False	NA	NA	False	NA	NA	NA	121422671	121382361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
tx.21420	chrX	+	1982	4	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-9	612	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	34.9221356098901	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGGTCATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	20828343	20853588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852217
tx.21421	chrX	-	5450	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	7	-2297	-2	2293	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTGTTTTAAATTGAG	3243	False	NA	NA	False	NA	NA	NA	20928284	20892884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
tx.21422	chrX	-	3221	8	ISM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	3387	14	3358	0	3prime_fragment	TRUE	canonical	3	772	junction_6	153.107671864193	897	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	NA	False	NA	NA	NA	23227934	23085523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732
tx.21423	chrX	+	4022	21	FSM	ENSMUSG00000036769.15	ENSMUST00000101670.3	4002	21	-43	23	2	12	multi-exon	FALSE	canonical	3	24	junction_1	11.664475984801	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	NA	NA	NA	23559291	23672241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_23559509_23559663_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
tx.21424	chrX	+	4179	20	FSM	ENSMUSG00000036769.15	ENSMUST00000035766.13	4167	20	0	-12	0	12	multi-exon	FALSE	canonical	3	33	junction_8	9.86248944541599	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	NA	NA	NA	23559289	23672241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
tx.21425	chrX	+	7012	36	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-160	6092	combination_of_known_junctions	FALSE	canonical	3	67	junction_31	18.2087666708503	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAACAATTTTAATAGTT	NA	False	NA	NA	False	NA	NA	NA	35152324	35286584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644
tx.21426	chrX	+	6852	54	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-146	2	combination_of_known_junctions	FALSE	canonical	1	53	junction_53	22.4821593760484	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAAGTGAAGGAAATAAT	NA	False	NA	NA	False	NA	NA	NA	35152338	35340217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
tx.21427	chrX	+	6805	53	FSM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	-138	-2	-138	2	multi-exon	FALSE	canonical	1	53	junction_52	21.5813446724207	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAAGTGAAGGAAATAAT	NA	False	NA	NA	False	NA	NA	NA	35152346	35340217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
tx.21428	chrX	+	6889	54	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-154	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_53	26.4392207878828	6	4	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAAGGAAATAATTCTT	NA	False	NA	NA	False	NA	NA	NA	35152330	35340221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333662_35339748
tx.21429	chrX	+	3711	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	1	0	1	0	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTGGTC	NA	False	NA	NA	False	NA	NA	NA	35375763	35434912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
tx.2143	chr10	-	4252	12	ISM	ENSMUSG00000034667.9	ENSMUST00000039810.8	5992	25	19475	0	-2243	0	3prime_fragment	FALSE	canonical	3	1158	junction_6	82.9013154248686	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	121442746	121423284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625
tx.21430	chrX	+	7367	11	FSM	ENSMUSG00000016239.12_ENSMUSG00000119926.1	ENSMUST00000016383.10	2911	11	59	-4515	59	2854	multi-exon	FALSE	canonical	3	28	junction_3	7.36478105580879	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTCTACCAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	35592064	35630509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_35593053_35596168_35596288_35598864_35598988_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
tx.21431	chrX	+	7541	12	Fusion	ENSMUSG00000016239.12_ENSMUSG00000119926.1	novel	2911	11	NA	NA	42	2855	multi-exon	FALSE	canonical	1	2	junction_3	15.6437614635123	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCTACCAAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	35592047	35630510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chrX_+_35593053_35596168_35596288_35598864_35598988_35603172_35603329_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
tx.21432	chrX	+	1856	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	1	0	1	0	multi-exon	FALSE	canonical	3	454	junction_1	42	595	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGAGGCTTTCATTTT	1669	False	NA	NA	False	NA	NA	NA	35861859	35869732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_35862268_35865773_35865930_35868440
tx.21433	chrX	-	5376	6	FSM	ENSMUSG00000059708.13	ENSMUST00000133980.2	1370	6	-306	-3700	-7	135	multi-exon	FALSE	canonical	3	34	junction_4	11.6687617166519	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGACTATTGACTGATCA	NA	False	NA	NA	False	NA	NA	NA	35909055	35871831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35900125_35900228_35908702
tx.21434	chrX	-	6145	7	FSM	ENSMUSG00000059708.13	ENSMUST00000051906.13	6003	7	-14	-128	-14	128	multi-exon	FALSE	canonical	3	11	junction_4	20.573040611441	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAATAGTGACTATTGA	NA	False	NA	NA	False	NA	NA	NA	35909062	35871838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35887220_35887990_35900125_35900228_35908702
tx.21435	chrX	+	5606	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	-48	-4447	-48	4447	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	36007263	36045302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
tx.21436	chrX	+	1241	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	11014	junction_3	650.055895032625	6773	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTCGTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	36059302	36062460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
tx.21437	chrX	-	3307	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	30	3	22	-3	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGCTTGTTTTGATCA	NA	False	NA	NA	False	NA	NA	NA	36127869	36112198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
tx.21438	chrX	-	3416	4	ISM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	9348	3	2114	-3	3prime_fragment	FALSE	canonical	3	146	junction_1	35.2357142052713	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGCTTGTTTTGATCA	NA	False	NA	NA	False	NA	NA	NA	36118551	36112198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935
tx.21439	chrX	+	1674	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	36	22	0	-22	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAACCTTAA	NA	False	NA	NA	False	NA	NA	NA	36137983	36147853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
tx.2144	chr10	-	4839	17	ISM	ENSMUSG00000034667.9	ENSMUST00000039810.8	5992	25	14625	0	1902	0	3prime_fragment	FALSE	canonical	3	1147	junction_16	83.1900826045389	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	121447596	121423284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380
tx.21440	chrX	+	1855	5	FSM	ENSMUSG00000016308.13	ENSMUST00000202812.2	719	5	-322	-814	0	-22	multi-exon	FALSE	canonical	3	845	junction_1	46.1702014290603	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAACCTTAA	NA	False	NA	NA	False	NA	NA	NA	36137983	36147853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
tx.21441	chrX	-	3836	3	FSM	ENSMUSG00000044149.8	ENSMUST00000239259.2	3882	3	46	0	46	0	multi-exon	FALSE	canonical	3	10	junction_2	0.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGCTGTAATTATTTCT	NA	False	NA	NA	False	NA	NA	NA	36167120	36151192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36154166_36155277_36155409_36166388
tx.21442	chrX	-	3294	10	FSM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	139	-1588	-26	3	multi-exon	FALSE	canonical	3	5	junction_1	15.8869462681912	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGGTGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	36253170	36177095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36179001_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
tx.21443	chrX	-	2081	10	NIC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-4	-801	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	11.2940495640649	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	NA	NA	NA	36253148	36179484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
tx.21444	chrX	-	292	2	ISM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	1317	39	1071	-39	3prime_fragment	FALSE	canonical	3	12849	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTTTCTGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	36347738	36346211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_36346403_36347637
tx.21445	chrX	-	374	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	203	35	-33	-35	multi-exon	FALSE	canonical	3	12849	junction_1	35	1095	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTCTGGTTTATAAAG	NA	False	NA	NA	False	NA	NA	NA	36348852	36346207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36346403_36347637_36347742_36348777
tx.21446	chrX	-	2343	10	FSM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	1	0	1	0	multi-exon	FALSE	canonical	3	68	junction_3	69.0213779729436	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	NA	False	NA	NA	NA	36373974	36355330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36356315_36359174_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
tx.21447	chrX	-	2381	11	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_3	55.9360348970143	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	NA	False	NA	NA	NA	36373973	36355330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
tx.21448	chrX	+	4228	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-6	8	-6	-8	multi-exon	TRUE	canonical	3	360	junction_3	33.4381425171914	534	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTCATATTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	36390441	36414391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
tx.21449	chrX	-	412	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	3	4	3	-4	multi-exon	FALSE	canonical	3	2951	junction_1	110	397	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCATTTTTATTTTTA	2315	False	NA	NA	False	NA	NA	NA	36454813	36451244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36451395_36453526_36453617_36454641
tx.2145	chr10	-	6055	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	0	intron_retention	FALSE	canonical	0	0	junction_24	344.244089354568	40	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	121462388	121423284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
tx.21450	chrX	-	798	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	31	-12	31	12	multi-exon	TRUE	canonical	3	60	junction_3	3.74165738677394	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTTAGGTTGTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	36474663	36472988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
tx.21451	chrX	+	799	4	FSM	ENSMUSG00000051827.12	ENSMUST00000063340.12	795	4	2	-6	2	6	multi-exon	FALSE	canonical	3	47	junction_3	56.8174464598878	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	36508630	36513345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36508740_36508901_36509314_36510828_36510875_36513113
tx.21452	chrX	+	851	5	FSM	ENSMUSG00000079637.11	ENSMUST00000184688.8	720	5	-36	-95	-36	4	multi-exon	FALSE	canonical	2	3	junction_3	22.1585198061603	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTGCTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	36635296	36640036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36635407_36635568_36635981_36637508_36637555_36637822_36637872_36639802
tx.21453	chrX	+	717	4	NNC	ENSMUSG00000096788.9	novel	799	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_3	23.6690139681023	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	36712105	36723468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_36712216_36712377_36712790_36720942_36720989_36723319
tx.21454	chrX	+	881	6	FSM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	12	0	12	0	multi-exon	FALSE	canonical	3	2792	junction_1	493.533626007388	1077	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTGATTCGAGTAA	8517	False	NA	NA	False	NA	NA	NA	36891647	36897308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
tx.21455	chrX	+	994	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	14	2	14	-2	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGGCTCCATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	36915800	36918732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
tx.21456	chrX	+	734	3	ISM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	458	4	458	-4	3prime_fragment	FALSE	canonical	3	187	junction_2	5.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGGCTCCATTGTC	NA	False	NA	NA	False	NA	NA	NA	36916244	36918730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_36916703_36917291_36917338_36918500
tx.21457	chrX	-	1012	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	-132	2	-132	-2	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGGCTCCATTATC	946	False	NA	NA	False	NA	NA	NA	36990779	36987975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
tx.21458	chrX	-	1539	3	NNC	ENSMUSG00000081133.3	novel	451	3	NA	NA	-100	209	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	1.5	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTTCAATTGCCCTCT	NA	False	NA	NA	False	NA	NA	NA	37034579	37029483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_37030512_37031396_37031443_37034114
tx.21459	chrX	+	918	3	FSM	ENSMUSG00000050197.6	ENSMUST00000152730.4	876	3	-37	-5	-37	5	multi-exon	FALSE	canonical	3	73	junction_1	2	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTTATGTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	37210058	37218849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_37210700_37211950_37211997_37218618
tx.2146	chr10	-	6080	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	0	intron_retention	FALSE	canonical	3	139	junction_20	277.67891817209	64	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	121462388	121423284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
tx.21460	chrX	-	1742	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	27	0	-13	0	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTTCAATTTGTAA	NA	False	NA	NA	False	NA	NA	NA	37545304	37493938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
tx.21461	chrX	-	3574	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	32	-2	-8	2	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	1535	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGCTCACATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	37545299	37508381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
tx.21462	chrX	+	939	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-60	-96	17	96	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATGACTCAATGTCCT	NA	False	NA	NA	False	NA	NA	NA	37689471	37702399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
tx.21463	chrX	-	7697	39	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	2	42	junction_7	32.9462859247091	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGTGTATATTGTTAC	NA	False	NA	NA	False	NA	NA	NA	41000774	40883869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
tx.21464	chrX	-	7613	39	FSM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	4	5	4	-5	multi-exon	FALSE	canonical	2	149	junction_20	23.0069843664894	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCATTGTGTATATTGT	NA	False	NA	NA	False	NA	NA	NA	41000774	40883872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
tx.21465	chrX	-	3516	21	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	5	37143	5	-8726	5prime_fragment	FALSE	canonical	3	149	junction_2	22.6773014267571	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTGAAACATTTATTA	NA	False	NA	NA	False	NA	NA	NA	41000773	40921010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
tx.21466	chrX	+	5550	7	NIC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	10	6	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	42.5535610208541	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTGTATTTGATT	NA	False	NA	NA	False	NA	NA	NA	41156804	41198539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_41156934_41157233_41157360_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
tx.21467	chrX	+	6415	8	FSM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	135	-8	53	8	multi-exon	FALSE	canonical	3	44	junction_1	28.7345344383332	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	NA	False	NA	NA	NA	41156847	41198541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
tx.21468	chrX	+	6611	7	FSM	ENSMUSG00000025860.16	ENSMUST00000115095.9	6670	7	66	-7	54	7	multi-exon	FALSE	canonical	3	22	junction_1	35.08283847632	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTTGTATTTGATTT	NA	False	NA	NA	False	NA	NA	NA	41157340	41198540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_41157750_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
tx.21469	chrX	+	5987	6	FSM	ENSMUSG00000025860.16	ENSMUST00000026978.7	6834	6	854	-7	854	7	multi-exon	FALSE	canonical	3	86	junction_1	18.4347497948847	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTTGTATTTGATTT	NA	False	NA	NA	False	NA	NA	NA	41183458	41198540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
tx.2147	chr10	-	6151	25	FSM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	-151	5	-151	-5	multi-exon	FALSE	canonical	3	537	junction_24	166.742560845221	852	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	121462388	121423289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
tx.21470	chrX	+	6199	34	FSM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	-38	10	-38	0	multi-exon	FALSE	canonical	3	50	junction_1	38.2930798352529	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	NA	False	NA	NA	NA	41238155	41366052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
tx.21471	chrX	+	6074	33	FSM	ENSMUSG00000025862.15	ENSMUST00000115072.8	5955	33	-119	0	-24	0	multi-exon	FALSE	canonical	3	50	junction_1	32.1178858854377	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	NA	False	NA	NA	NA	41238169	41366052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
tx.21472	chrX	+	5838	33	FSM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	-19	6	-19	4	multi-exon	FALSE	canonical	3	102	junction_1	27.0432957264827	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATGCTTTATCTCTT	NA	False	NA	NA	False	NA	NA	NA	41239558	41366056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
tx.21473	chrX	+	5947	34	NIC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-19	2	combination_of_known_junctions	FALSE	canonical	3	63	junction_30	34.473955780863	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTATGCTTTATCTC	NA	False	NA	NA	False	NA	NA	NA	41239558	41366054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
tx.21474	chrX	+	5735	33	NIC	ENSMUSG00000025862.15	novel	294	3	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	36.8033201627244	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	NA	False	NA	NA	NA	41239911	41366052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_41239966_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
tx.21475	chrX	-	3497	2	FSM	ENSMUSG00000045284.10	ENSMUST00000060481.9	3509	2	13	-1	13	1	multi-exon	FALSE	canonical	3	37	junction_1	0	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCTGTTTTTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	43879061	43875445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_43877171_43877289
tx.21476	chrX	-	3514	2	FSM	ENSMUSG00000045284.10	ENSMUST00000115056.2	3495	2	-20	1	16	-1	multi-exon	FALSE	canonical	3	16	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCTCTGTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	43879058	43875447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_43877171_43877267
tx.21477	chrX	-	5070	23	NIC	ENSMUSG00000031099.17	novel	4798	23	NA	NA	-27	-3	intron_retention	FALSE	canonical	2	9	junction_16	5.32517023357272	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTATTTCCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	46981456	46898249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
tx.21478	chrX	-	4047	24	NIC	ENSMUSG00000031099.17	novel	3991	24	NA	NA	-41	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	5.5376354545258	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTATTTCCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	46981470	46898249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_46898998_46900034_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
tx.21479	chrX	+	5164	23	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-3	0	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	25.9866860380401	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	NA	False	NA	NA	NA	47001328	47054745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
tx.2148	chr10	-	6127	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-4	intron_retention	FALSE	canonical	0	0	junction_24	266.812928638942	938	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCATTGGAGTGGGCC	NA	False	NA	NA	False	NA	NA	NA	121462388	121423288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
tx.21480	chrX	+	5183	24	FSM	ENSMUSG00000001173.16	ENSMUST00000001202.15	5253	24	70	0	2	0	multi-exon	FALSE	non_canonical	0	0	junction_1	28.8803018275155	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	NA	False	NA	NA	NA	47001333	47054745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
tx.21481	chrX	-	3225	3	FSM	ENSMUSG00000037010.8	ENSMUST00000039026.8	3149	3	-76	0	-76	0	multi-exon	FALSE	canonical	2	8	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	47123806	47114022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_47116585_47117170_47117343_47123315
tx.21482	chrX	+	3237	21	FSM	ENSMUSG00000037005.17	ENSMUST00000077775.11	3498	21	-48	309	-48	2	multi-exon	TRUE	canonical	3	24	junction_11	7.3109506905737	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTGGGCAGACTCTG	NA	False	NA	NA	False	NA	NA	NA	47197553	47225549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
tx.21483	chrX	+	2655	8	FSM	ENSMUSG00000031101.7	ENSMUST00000033427.7	2677	8	22	0	22	0	multi-exon	FALSE	canonical	1	3	junction_3	1.30930734141595	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCGTCGCCTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	47235334	47250442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_47235595_47243402_47243499_47243852_47244000_47246295_47246438_47247609_47247759_47247918_47248129_47248280_47248432_47248942
tx.21484	chrX	-	2966	10	FSM	ENSMUSG00000036985.13	ENSMUST00000037960.11	2982	10	16	0	-6	0	multi-exon	FALSE	canonical	3	96	junction_4	12.3107902084129	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCCTCCTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	47297548	47260845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
tx.21485	chrX	+	174	2	Intergenic	novelGene_401	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAGGGCATTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	47298852	47348358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_47299007_47348338
tx.21486	chrX	+	1414	10	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	130.820015835536	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	47345745	47371327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47367243_47367438_47367544_47367645_47370938
tx.21487	chrX	+	2509	15	FSM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	-5	3	-5	-3	multi-exon	FALSE	canonical	3	320	junction_8	49.1840047833705	321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	47345733	47371327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
tx.21488	chrX	+	6504	4	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	14881	-3	intron_retention	FALSE	canonical	3	384	junction_1	54.1869192907497	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	47360675	47371327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_47366497_47367243_47367438_47367544_47367645_47370938
tx.21489	chrX	+	5976	11	ISM	ENSMUSG00000036959.16	ENSMUST00000037596.13	7360	14	25041	1	-457	-1	3prime_fragment	FALSE	canonical	3	9	junction_8	6.847627326308	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAACCCGTGTCAGGGC	NA	False	NA	NA	False	NA	NA	NA	47457687	47496925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
tx.2149	chr10	-	5959	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2483	-2	intron_retention	FALSE	canonical	3	239	junction_24	221.439792262417	243	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	9368	False	NA	NA	False	NA	NA	NA	121464720	121423286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
tx.21490	chrX	-	6208	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-124	4	-124	-1	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	NA	False	NA	NA	NA	47543170	47499926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
tx.21491	chrX	-	6052	9	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	355	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	25.7718354022371	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGTGTTCAGATTCCA	NA	False	NA	NA	False	NA	NA	NA	47542691	47499927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542424
tx.21492	chrX	-	2122	16	FSM	ENSMUSG00000036932.15	ENSMUST00000114945.9	2221	16	99	0	-34	0	multi-exon	FALSE	canonical	3	21	junction_15	394.039704711199	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	47602337	47563820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47592459_47592591_47602112
tx.21493	chrX	-	2124	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	113	0	-24	0	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	1236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	47602327	47563820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
tx.21494	chrX	+	169	1	Intergenic	novelGene_402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	2	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAAAAGTTATAACT	NA	False	NA	NA	False	NA	NA	NA	47586499	47586668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_47586500_47586700
tx.21495	chrX	+	1139	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	20	-1	20	1	multi-exon	FALSE	canonical	3	18	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGTGGCTTTGTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	47608181	47619110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_47608736_47618525
tx.21496	chrX	-	4038	20	FSM	ENSMUSG00000036916.14	ENSMUST00000072292.12	4045	20	6	1	6	0	multi-exon	FALSE	canonical	3	45	junction_17	15.8598431908636	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	NA	False	NA	NA	NA	47683323	47630502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
tx.21497	chrX	-	4074	21	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	26.1914108058348	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTGCATCATCTAATA	NA	False	NA	NA	False	NA	NA	NA	47683275	47630503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682390_47682476_47683240
tx.21498	chrX	-	3992	20	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	28.9537791944314	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTGCATCATCTAATA	NA	False	NA	NA	False	NA	NA	NA	47683312	47630503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682390_47682476_47683240
tx.21499	chrX	+	1349	10	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	17.3254968040219	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	47712629	47751171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
tx.215	chr1	+	1535	6	NIC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	64	junction_1	290.336769975833	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTCCCATGGATGAA	NA	False	NA	NA	False	NA	NA	NA	39574872	39584482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_39575419_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
tx.2150	chr10	-	6028	26	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-5	combination_of_known_junctions	FALSE	canonical	3	151	junction_17	270.192008764138	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	121462385	121423289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
tx.21500	chrX	+	1700	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	47	0	47	0	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	False	NA	NA	False	NA	NA	NA	47783927	47799600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
tx.21501	chrX	-	3170	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114914.8	3936	16	-40	806	7	-55	multi-exon	FALSE	canonical	2	12	junction_14	13.255774423079	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTGGGCTGTGAGGCT	NA	False	NA	NA	False	NA	NA	NA	48377129	48099389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
tx.21502	chrX	-	213	2	ISM	ENSMUSG00000031109.17	ENSMUST00000137518.8	968	6	-39	221403	8	-217088	5prime_fragment	FALSE	canonical	3	55	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTTTAAATATAAGGAG	NA	False	NA	NA	False	NA	NA	NA	48377128	48375719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_48375782_48376977
tx.21503	chrX	-	4411	20	FSM	ENSMUSG00000031111.17	ENSMUST00000033442.14	4421	20	6	4	6	-4	multi-exon	FALSE	canonical	0	0	junction_6	2.03569259008565	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCATGGTAGTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	48886620	48871416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879644_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883651_48883999_48884027_48884155_48884285_48886529
tx.21504	chrX	-	1759	5	FSM	ENSMUSG00000031111.17	ENSMUST00000114891.2	1761	5	2	0	2	0	multi-exon	FALSE	canonical	2	4	junction_2	1.08972473588517	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATAGCTTTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	48886624	48881842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_48883069_48883368_48883651_48883999_48884027_48884155_48884285_48886529
tx.21505	chrX	-	2864	3	ISM	ENSMUSG00000085396.8	ENSMUST00000204991.3	1754	5	59	4984	59	3	5prime_fragment	FALSE	canonical	3	87	junction_1	14	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGAAGATTGGAAAGGT	NA	False	NA	NA	False	NA	NA	NA	49659017	49651998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_49653845_49656416_49656571_49658153
tx.21506	chrX	+	3324	12	FSM	ENSMUSG00000031112.11	ENSMUST00000033444.11	3639	12	316	-1	-78	1	multi-exon	TRUE	canonical	3	20	junction_11	5.29618605950164	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCGATGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	49930239	49981975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_49930424_49930555_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
tx.21507	chrX	+	3200	11	ISM	ENSMUSG00000031112.11	ENSMUST00000033444.11	3639	12	572	-1	178	1	3prime_fragment	FALSE	canonical	3	20	junction_10	5.55067563455117	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCGATGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	49930495	49981975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
tx.21508	chrX	-	3800	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-747	-377	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	34.5671648951558	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTTGTCTCTTTAATT	NA	False	NA	NA	False	NA	NA	NA	50107642	50093165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_50095628_50103847_50104161_50106502_50107328_50107442
tx.21509	chrX	-	3505	3	FSM	ENSMUSG00000050029.8	ENSMUST00000053593.8	3545	3	-336	376	-336	-376	multi-exon	FALSE	canonical	3	105	junction_1	4	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTGTCTCTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	50107231	50093164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_50095628_50103847_50104161_50106502
tx.2151	chr10	-	5925	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-119	-3	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_21	341.560639418537	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCATTGGAGTGGGCCT	NA	False	NA	NA	False	NA	NA	NA	121462356	121423287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
tx.21510	chrX	-	8708	8	NNC	ENSMUSG00000036109.18	novel	2243	8	NA	NA	163	3763	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	8.22638859936455	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTGGTTATGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	50294546	50202382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50253294_50253542_50294438
tx.21511	chrX	-	1904	8	FSM	ENSMUSG00000036109.18	ENSMUST00000114876.9	2243	8	-25	364	-25	8	multi-exon	FALSE	canonical	3	6	junction_7	7.54848275064166	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTATAGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	50294892	50209320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50253294_50253542_50294650
tx.21512	chrX	-	6936	8	FSM	ENSMUSG00000055780.11	ENSMUST00000069509.4	4120	8	62	-2878	62	2878	multi-exon	FALSE	canonical	3	16	junction_1	4.17475405605784	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTGACTCAATAGTTG	NA	False	NA	NA	False	NA	NA	NA	50889959	50839957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
tx.21513	chrX	-	1405	4	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-22	1	combination_of_known_splicesites	FALSE	canonical	3	60	junction_2	10.4029910228848	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGCTCCGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	51061671	51057570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_51058747_51059091_51059163_51059858_51059953_51061607
tx.21514	chrX	-	2101	3	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-22	1	intron_retention	FALSE	canonical	3	81	junction_2	1	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGCTCCGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	51061671	51057570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_51058747_51059091_51059953_51061607
tx.21515	chrX	-	1521	5	NIC	ENSMUSG00000031118.9	novel	1232	4	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	35.6195171219375	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTGTTGCTCCGTTTC	NA	False	NA	NA	False	NA	NA	NA	51061672	51057572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_51058747_51059091_51059163_51059359_51059477_51059858_51059953_51061607
tx.21516	chrX	-	4420	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-122	-1647	-122	1647	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	338	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGTGTGTATAAGTGT	NA	False	NA	NA	False	NA	NA	NA	51254251	51140250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
tx.21517	chrX	-	2267	8	FSM	ENSMUSG00000055653.14	ENSMUST00000069360.14	2216	8	-51	0	-22	0	multi-exon	FALSE	canonical	3	233	junction_6	17.9398086582293	265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGGTCCTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	51702849	51361302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_51361832_51403713_51403874_51454598_51454720_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
tx.21518	chrX	+	1563	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	-26	-1	-26	1	multi-exon	FALSE	canonical	3	142	junction_1	0	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATGCCTGTGATTCT	NA	False	NA	NA	False	NA	NA	NA	51880050	51888346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_51880203_51886935
tx.21519	chrX	+	4357	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	-7	0	-7	0	multi-exon	FALSE	canonical	3	199	junction_10	29.4423164849507	290	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	52001135	52045820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
tx.2152	chr10	-	6020	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-164	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	335.836865159261	121	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCATTGGAGTGGGCC	NA	False	NA	NA	False	NA	NA	NA	121462401	121423288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
tx.21520	chrX	+	1326	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	818.20507882829	1313	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	NA	False	NA	NA	NA	52076982	52110537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52105200_52105307_52108981_52109029_52109199_52109277_52109943
tx.21521	chrX	+	4255	4	ISM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	24756	-1	24756	1	3prime_fragment	FALSE	canonical	3	2200	junction_1	55.2589861973196	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	NA	False	NA	NA	NA	52101769	52110537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_52105307_52108981_52109029_52109199_52109277_52109943
tx.21522	chrX	-	4359	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	-825	2	-40	-2	multi-exon	FALSE	canonical	3	73	junction_3	8.54034542626936	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGATCGTAAAAGTCTGC	NA	False	NA	NA	False	NA	NA	NA	52358722	52332303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
tx.21523	chrX	-	4364	9	FSM	ENSMUSG00000036022.16	ENSMUST00000071023.12	4334	9	-42	12	-42	-2	multi-exon	TRUE	canonical	3	12	junction_3	25.3743842289818	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGATCGTAAAAGTCTGC	NA	False	NA	NA	False	NA	NA	NA	52358724	52332303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_52335168_52342912_52343010_52347833_52347899_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
tx.21524	chrX	-	3570	10	NNC	ENSMUSG00000036022.16	novel	2038	10	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.833271190576	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGTCTGCCTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	52358703	52332295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
tx.21525	chrX	-	2297	7	NNC	ENSMUSG00000023074.12	novel	1782	7	NA	NA	9	0	intron_retention	FALSE	canonical	1	3	junction_2	42.1056871323683	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTCTCTCTCCGTTC	NA	False	NA	NA	False	NA	NA	NA	52459370	52433474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_52434867_52436580_52436743_52440547_52440671_52444532_52444751_52446286_52446363_52446450_52446705_52459298
tx.21526	chrX	-	2176	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	7	-410	7	0	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTCTCTCTCCGTTC	NA	False	NA	NA	False	NA	NA	NA	52459372	52433474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
tx.21527	chrX	+	1454	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-25	-2	-25	2	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTACCTGTAGTTAA	NA	False	NA	NA	False	NA	NA	NA	52726767	52740410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
tx.21528	chrX	-	1237	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-12	-1	-12	1	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	675	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	NA	False	NA	NA	NA	52759810	52744866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
tx.21529	chrX	-	1041	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	-8	-1	2	1	multi-exon	FALSE	canonical	3	95	junction_7	69.0238054173031	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	NA	NA	NA	52799671	52785713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
tx.2153	chr10	-	5843	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-166	-2	intron_retention	FALSE	canonical	2	7	junction_24	265.472112863731	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	NA	False	NA	NA	False	NA	NA	NA	121462403	121423286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462335
tx.21530	chrX	-	993	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	-8	-1	2	1	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	NA	NA	NA	52799671	52785713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
tx.21531	chrX	+	1029	8	FSM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	19	junction_1	16.2819544532076	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAAATAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	55181924	55198858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
tx.21532	chrX	+	3288	4	NIC	ENSMUSG00000073176.5	novel	3738	5	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	18.8030730348939	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTTTCTGATTCTTT	NA	False	NA	NA	False	NA	NA	NA	55391761	55411032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_55391800_55398822_55399028_55407826_55407941_55408101
tx.21533	chrX	+	3738	5	FSM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	-1	1	-1	-1	multi-exon	FALSE	canonical	3	23	junction_1	8.6421930087218	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTTTCTGATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55391758	55411033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_55391800_55393642_55394089_55398822_55399028_55407826_55407941_55408101
tx.21534	chrX	+	2423	2	FSM	ENSMUSG00000054850.5	ENSMUST00000068106.5	2393	2	-30	0	-30	0	multi-exon	FALSE	canonical	3	59	junction_1	0	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCCTGGCTGCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	55419915	55423159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_55420569_55421389
tx.21535	chrX	+	3910	18	NIC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	-11	1	intron_retention	FALSE	canonical	3	44	junction_10	16.0656094259874	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTAGGTGTATGTCTC	NA	False	NA	NA	False	NA	NA	NA	55500205	55553201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
tx.21536	chrX	+	3799	17	FSM	ENSMUSG00000035967.16	ENSMUST00000039374.9	3766	17	-31	-2	-11	1	multi-exon	FALSE	canonical	3	20	junction_10	18.8414436814168	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTAGGTGTATGTCTC	NA	False	NA	NA	False	NA	NA	NA	55500205	55553201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
tx.21537	chrX	+	4042	17	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-11	1	intron_retention	FALSE	canonical	3	44	junction_9	15.57040461902	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTAGGTGTATGTCTC	NA	False	NA	NA	False	NA	NA	NA	55500205	55553201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
tx.21538	chrX	+	4012	7	ISM	ENSMUSG00000035967.16	ENSMUST00000143142.8	2766	12	10838	-3	-10411	1	3prime_fragment	FALSE	canonical	3	67	junction_5	12.3827837473378	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTAGGTGTATGTCTC	NA	False	NA	NA	False	NA	NA	NA	55540015	55553201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
tx.21539	chrX	-	4113	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	123	-2	123	2	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	212	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTGGTAGTGGGT	NA	False	NA	NA	False	NA	NA	NA	55643306	55630869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
tx.2154	chr10	-	7245	24	ISM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	1870	3	1854	-3	3prime_fragment	FALSE	canonical	3	1147	junction_16	77.4538584515705	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCATTGGAGTGGGCCT	NA	False	NA	NA	False	NA	NA	NA	121460367	121423287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762
tx.21540	chrX	+	4427	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	9	3	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	37.5097903886439	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTCACTGTTATTTG	NA	False	NA	NA	False	NA	NA	NA	55655143	55709192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
tx.21541	chrX	+	4522	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	61	393	19	-4	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTATTTGAGTCA	NA	False	NA	NA	False	NA	NA	NA	55655195	55709197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
tx.21542	chrX	+	2390	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	-37	3	-37	3	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCTCCTGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	55777109	55838703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
tx.21543	chrX	+	2212	6	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	-46	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	48.3553513067582	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCTCCTGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	55777100	55838703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55837203
tx.21544	chrX	-	2907	16	FSM	ENSMUSG00000067878.14	ENSMUST00000114766.8	2891	16	-16	0	-16	0	multi-exon	FALSE	canonical	2	2	junction_7	2.18682926224756	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTTGTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	55867702	55843217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_55843463_55844649_55845030_55846362_55846553_55847120_55847203_55849725_55849831_55850759_55850905_55853203_55853331_55854977_55855151_55855397_55855526_55856222_55856912_55858674_55858768_55860884_55860994_55862635_55862800_55864035_55864114_55864203_55864297_55867596
tx.21545	chrX	+	2866	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	-59	3	-27	-3	multi-exon	FALSE	canonical	3	407	junction_1	40.9980427114861	459	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGGACTTGAGTTAAC	NA	False	NA	NA	False	NA	NA	NA	56098915	56112540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
tx.21546	chrX	+	2734	9	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	261	3	-22	-3	3prime_fragment	FALSE	canonical	3	455	junction_5	31.3996417177012	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGGACTTGAGTTAAC	NA	False	NA	NA	False	NA	NA	NA	56099235	56112540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
tx.21547	chrX	-	2326	10	NIC	ENSMUSG00000031134.17	novel	2139	10	NA	NA	0	184	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	18.9489242015229	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	56438341	56428705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437062_56438211
tx.21548	chrX	-	2321	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	0	-182	0	182	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTTGGGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	56438341	56428707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
tx.21549	chrX	+	2161	17	FSM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	1	-6	1	6	multi-exon	FALSE	canonical	1	199	junction_7	106.775300719548	361	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTCTGGCCTCAGT	NA	False	NA	NA	False	NA	NA	NA	56454514	56534133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
tx.2155	chr10	+	3116	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	5	2	4	-2	multi-exon	FALSE	canonical	3	147	junction_1	1	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGTATATATGGTTT	NA	False	NA	NA	False	NA	NA	NA	121575846	121588768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_121576116_121581235_121581522_121586207
tx.21550	chrX	+	4848	2	ISM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	16	-71	16	71	intron_retention	FALSE	canonical	3	213	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTTAGAGAATTTCTG	9516	False	NA	NA	False	NA	NA	NA	57076018	57081990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_57077598_57078721
tx.21551	chrX	+	4033	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	-10	-74	-10	74	multi-exon	FALSE	canonical	3	194	junction_2	9.5	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAGAGAATTTCTGGTG	9490	False	NA	NA	False	NA	NA	NA	57075992	57081993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_57077598_57078721_57078886_57079729
tx.21552	chrX	+	1560	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	16	-4	16	4	multi-exon	FALSE	canonical	3	101	junction_1	0	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCAGTGTTTGTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	57956836	57965668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_57956922_57964193
tx.21553	chrX	-	2830	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-331	0	-331	0	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACTTCAATGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	58180127	58107504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
tx.21554	chrX	-	3839	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	801	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	NA	False	NA	NA	NA	59223648	59101315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
tx.21555	chrX	-	4314	28	FSM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-87	0	-87	0	multi-exon	FALSE	canonical	3	390	junction_27	54.2283947104	299	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	NA	False	NA	NA	NA	59224536	59101315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
tx.21556	chrX	-	3237	15	ISM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-84	56489	-84	-56486	5prime_fragment	FALSE	canonical	3	390	junction_14	50.407775963149	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	59224533	59157804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
tx.21557	chrX	-	5986	29	FSM	ENSMUSG00000062949.14	ENSMUST00000033480.13	5939	29	-37	-10	-37	7	multi-exon	FALSE	canonical	3	14	junction_1	18.7130588474619	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCGAGTGTCTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	59449209	59268642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_59271154_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
tx.21558	chrX	-	6082	30	FSM	ENSMUSG00000062949.14	ENSMUST00000101527.3	6044	30	-32	-6	-32	3	multi-exon	FALSE	canonical	3	63	junction_14	11.609582331096	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATTCGAGTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	59449204	59268646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
tx.21559	chrX	-	5887	29	NIC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-31	7	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	19.8131578626375	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCGAGTGTCTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	59449203	59268642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
tx.2156	chr10	+	2949	3	FSM	ENSMUSG00000053684.9	ENSMUST00000136432.2	2968	3	4	15	4	-2	multi-exon	FALSE	canonical	3	27	junction_1	61	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGTATATATGGTTT	NA	False	NA	NA	False	NA	NA	NA	121575846	121588768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_121576116_121581402_121581522_121586207
tx.21560	chrX	-	6003	31	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-850	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_30	19.6196047077633	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGTATTCGAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	59450022	59268649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995_59449068_59449961
tx.21561	chrX	-	1669	9	NNC	ENSMUSG00000079578.2	novel	782	8	NA	NA	-877	715	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_8	9.82264602843857	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATTGAAATTATCAAATT	NA	False	NA	NA	False	NA	NA	NA	66738045	66725790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_66726652_66726758_66726864_66732572_66732672_66733445_66733546_66734431_66734550_66736337_66736373_66736521_66736592_66737059_66737213_66737917
tx.21562	chrX	+	2295	8	FSM	ENSMUSG00000079577.2	ENSMUST00000114672.2	782	8	-834	-679	-834	679	multi-exon	FALSE	canonical	3	52	junction_3	6.1842459491181	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAATATGTCAATTAAA	NA	False	NA	NA	False	NA	NA	NA	66738469	66750635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_66739413_66739880_66739951_66740099_66740135_66741912_66742031_66742916_66743017_66743790_66743890_66749598_66749704_66749810
tx.21563	chrX	+	4301	16	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114657.9	4076	16	-229	4	0	-4	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTAGTCTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	67722187	67761565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
tx.21564	chrX	+	4224	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	2	-4	multi-exon	FALSE	canonical	3	204	junction_13	199.338461472497	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTAGTCTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	67722189	67761565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
tx.21565	chrX	+	4362	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	43	4	2	-4	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	350	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTAGTCTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	67722189	67761565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
tx.21566	chrX	+	4326	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_14	180.447880286802	125	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTAGTCTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	67722189	67761565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
tx.21567	chrX	+	4287	17	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114653.2	4058	17	-233	4	2	-4	multi-exon	FALSE	canonical	3	204	junction_14	173.862182759075	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTAGTCTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	67722189	67761565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
tx.21568	chrX	+	782	5	FSM	ENSMUSG00000062170.13	ENSMUST00000069731.12	799	5	11	6	11	-6	multi-exon	FALSE	canonical	3	455	junction_2	146.787899705664	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	67805455	67848167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_67805838_67807537_67807616_67815650_67815748_67847210_67847300_67848031
tx.21569	chrX	+	701	4	FSM	ENSMUSG00000062170.13	ENSMUST00000114647.8	679	4	-28	6	14	-6	multi-exon	FALSE	canonical	3	331	junction_1	201.191451110627	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	67805458	67848167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_67805838_67815650_67815748_67847210_67847300_67848031
tx.2157	chr10	-	5065	22	FSM	ENSMUSG00000020121.16	ENSMUST00000020322.12	7711	22	-524	3170	-517	1079	multi-exon	FALSE	canonical	3	19	junction_11	9.24570133614962	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATAGATTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	121883737	121620065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633_121664668_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
tx.21570	chrX	-	4967	9	FSM	ENSMUSG00000035847.16	ENSMUST00000101509.9	4972	9	1	4	1	-4	multi-exon	TRUE	canonical	3	25	junction_4	5.15842757049084	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTTTTGGGGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	69408689	69386678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69408400
tx.21571	chrX	+	1093	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	1	0	1	0	multi-exon	FALSE	canonical	3	343	junction_1	1.5	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	False	NA	NA	False	NA	NA	NA	69429483	69433023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_69429758_69431499_69431773_69432477
tx.21572	chrX	-	2510	7	FSM	ENSMUSG00000073139.10	ENSMUST00000114630.3	1307	7	3	-1206	3	0	multi-exon	FALSE	canonical	3	188	junction_5	21.8587638158144	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	69520783	69503358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
tx.21573	chrX	-	2355	7	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	74.9288551449529	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	69520786	69503358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510810_69513723_69513901_69520583
tx.21574	chrX	+	3357	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	21	1	-1	-1	multi-exon	FALSE	canonical	3	290	junction_14	28.3207755284104	397	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCAGGGCTATGACTG	NA	False	NA	NA	False	NA	NA	NA	70258632	70358900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
tx.21575	chrX	+	2634	14	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	25	6489	0	-1505	5prime_fragment	FALSE	canonical	3	300	junction_1	26.1022114731105	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAACCTTGTTGATTG	NA	False	NA	NA	False	NA	NA	NA	70258636	70352412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305
tx.21576	chrX	+	4490	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	19.0688568554895	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGTTGTCTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	70408358	70462801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
tx.21577	chrX	+	4640	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	-7	1	-7	-1	multi-exon	FALSE	canonical	3	55	junction_13	10.0440356959354	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGTTGTCTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	70408358	70462801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
tx.21578	chrX	-	3386	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	208	6	4	-6	multi-exon	FALSE	canonical	3	43	junction_4	6.51683479938452	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTATGTCCTGATGTGAT	NA	False	NA	NA	False	NA	NA	NA	70536247	70463671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
tx.21579	chrX	+	1544	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	4	23	4	-23	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	564	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTATTACAACGGCCT	NA	False	NA	NA	False	NA	NA	NA	70599527	70604259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
tx.2158	chr10	-	5127	22	FSM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-518	3178	-518	1071	multi-exon	FALSE	canonical	3	28	junction_11	7.39093027569169	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATGATAGATTT	NA	False	NA	NA	False	NA	NA	NA	121883738	121620073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
tx.21580	chrX	+	2721	4	NNC	ENSMUSG00000073131.13	novel	4652	4	NA	NA	-3191	-1736	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	181.726901329073	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTCACACTGGTATT	NA	False	NA	NA	False	NA	NA	NA	70856338	70866576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_70856555_70860076_70860306_70863673_70863784_70864410
tx.21581	chrX	+	4166	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	22	7	-10	-7	multi-exon	FALSE	canonical	3	286	junction_1	56.5	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTACTGTGCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	70860385	70868305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_70860547_70863673_70863784_70864410
tx.21582	chrX	+	5951	4	FSM	ENSMUSG00000033361.14	ENSMUST00000048790.7	5931	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	9	junction_1	0.471404520791032	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTACCTTGTCCTGGTCG	NA	False	NA	NA	False	NA	NA	NA	71006567	71016328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_71006654_71009420_71009459_71010107_71010269_71010662
tx.21583	chrX	+	2225	7	Genic_Genomic	ENSMUSG00000033343.2	novel	948	1	NA	NA	-4101	383	multi-exon	FALSE	canonical	2	4	junction_1	3.07769755210323	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTAGTGTGTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	71261521	71266953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_+_71261614_71262220_71262501_71263739_71263837_71264233_71264433_71264562_71264653_71264786_71264860_71265559
tx.21584	chrX	+	2819	6	Genic_Genomic	ENSMUSG00000033343.2	novel	948	1	NA	NA	-4088	383	multi-exon	FALSE	canonical	2	4	junction_5	2.8	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTAGTGTGTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	71261534	71266953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_+_71262501_71263739_71263837_71264233_71264433_71264562_71264653_71264786_71264860_71265559
tx.21585	chrX	-	1170	4	FSM	ENSMUSG00000031347.13	ENSMUST00000033713.11	1026	4	9	-153	9	-19	multi-exon	FALSE	canonical	3	611	junction_2	29.9146935282461	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTTTTTGCTTTCA	NA	False	NA	NA	False	NA	NA	NA	71960453	71957156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293
tx.21586	chrX	-	1211	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	31	44	31	-44	multi-exon	TRUE	canonical	3	590	junction_4	36.4862987983161	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTTGTAACTTTTCT	NA	False	NA	NA	False	NA	NA	NA	71961986	71957181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
tx.21587	chrX	+	1761	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	28	379	28	-379	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	332	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGACTCTGGTGTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	71962190	72001741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
tx.21588	chrX	+	3519	19	FSM	ENSMUSG00000031351.16	ENSMUST00000164800.8	3557	19	11	27	-10	-27	multi-exon	FALSE	canonical	3	40	junction_12	13.3427050397503	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATTATAACTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	72030955	72075122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
tx.21589	chrX	+	3514	19	FSM	ENSMUSG00000031351.16	ENSMUST00000114546.9	3533	19	-6	25	-6	-25	multi-exon	FALSE	canonical	3	15	junction_9	16.5279411756629	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTATAACTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	72030959	72075124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045013_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
tx.2159	chr10	-	1519	6	NIC	ENSMUSG00000034620.18	novel	1546	7	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	112.932546238894	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	121933015	121917164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932804
tx.21590	chrX	-	2606	5	NNC	ENSMUSG00000050424.10	novel	2287	2	NA	NA	-2595	-3	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_1	20.9568008054665	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTCTTTCTGGCGATG	NA	False	NA	NA	False	NA	NA	NA	72083304	72077589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_72077934_72078769_72080775_72080892_72080952_72081548_72081672_72083229
tx.21591	chrX	-	2067	2	FSM	ENSMUSG00000050424.10	ENSMUST00000114540.4	2287	2	219	1	219	-1	multi-exon	FALSE	canonical	1	35	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTTTCTGGCGATGTT	NA	False	NA	NA	False	NA	NA	NA	72080490	72077587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72077934_72078769
tx.21592	chrX	-	2723	4	ISM	ENSMUSG00000057836.13	ENSMUST00000114524.9	1584	9	4523	0	2509	0	intron_retention	FALSE	canonical	3	806	junction_1	348.884890281403	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72136100	72129898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464
tx.21593	chrX	-	3789	7	NIC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	15	0	intron_retention	FALSE	canonical	3	586	junction_5	385.386674508718	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72140650	72129898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138566_72138689_72140586
tx.21594	chrX	-	1595	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	51	-1	15	-1	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	333	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	NA	NA	NA	72140650	72129899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
tx.21595	chrX	-	1071	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	9	303	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	76.0110088696878	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72161299	72151711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
tx.21596	chrX	-	1172	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	9	469	9	305	multi-exon	TRUE	canonical	3	269	junction_2	77.2438306598009	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	NA	NA	NA	72161299	72151709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
tx.21597	chrX	-	1119	9	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-17	303	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	115.823141038395	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72161325	72151711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
tx.21598	chrX	-	1162	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-5	304	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_8	132.269551957357	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCATGCTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	72161313	72151710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161230
tx.21599	chrX	-	1048	8	NNC	ENSMUSG00000058328.14	novel	1474	8	NA	NA	9	303	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	139.651022779159	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72161299	72151711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161230
tx.216	chr1	-	2500	7	FSM	ENSMUSG00000048234.14	ENSMUST00000062525.11	2492	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	163	junction_3	11.4661337085446	226	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGTAACAAATTT	4709	False	NA	NA	False	NA	NA	NA	39616494	39590376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
tx.2160	chr10	-	1445	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	202	3146	-13	0	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	121933074	121917164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
tx.21600	chrX	+	2986	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	21	7	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	23.412817002659	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTCTAAGACAGCTCT	NA	False	NA	NA	False	NA	NA	NA	72160673	72172875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_72160742_72161226_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
tx.21601	chrX	+	2858	5	FSM	ENSMUSG00000067771.10	ENSMUST00000088459.9	2864	5	21	-15	21	15	multi-exon	FALSE	canonical	3	20	junction_1	16.161296358894	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACAGCTCTACTGATCC	NA	False	NA	NA	False	NA	NA	NA	72160673	72172883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72160742_72166673_72166742_72167034_72167132_72168423_72168590_72170424
tx.21602	chrX	+	2960	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	13	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	22.4499443206436	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGATGTCTAAGACAGCT	NA	False	NA	NA	False	NA	NA	NA	72160665	72172873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_72160742_72166217_72166322_72166673_72166742_72167034_72167132_72168423_72168590_72170424
tx.21603	chrX	+	3479	5	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	11	5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	17.8798070459387	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGATGTCTAAGACAGCT	NA	False	NA	NA	False	NA	NA	NA	72160663	72172873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
tx.21604	chrX	-	3469	5	NNC	ENSMUSG00000071745.2	novel	2862	5	NA	NA	22	9	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	17.5499287747842	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTCTAAGACAGCTCT	NA	False	NA	NA	False	NA	NA	NA	72193034	72180828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192347
tx.21605	chrX	-	2843	5	FSM	ENSMUSG00000071745.2	ENSMUST00000080324.4	2862	5	22	-3	22	3	multi-exon	FALSE	canonical	3	17	junction_4	17.5499287747842	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTAGATGTCTAAGAC	NA	False	NA	NA	False	NA	NA	NA	72193034	72180834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192967
tx.21606	chrX	+	1172	9	FSM	ENSMUSG00000072479.11	ENSMUST00000114518.9	1652	9	9	471	9	308	multi-exon	FALSE	canonical	3	121	junction_8	146.338167868127	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	NA	NA	NA	72192410	72202007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
tx.21607	chrX	+	1100	8	NIC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	-18	308	combination_of_known_splicesites	FALSE	canonical	3	121	junction_7	152.49623615295	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	NA	NA	NA	72192383	72202007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
tx.21608	chrX	+	1608	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-34	-10	-19	0	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	374	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72235793	72246536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
tx.21609	chrX	+	2419	8	NIC	ENSMUSG00000073125.11	novel	2384	8	NA	NA	-16	0	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	NA	NA	NA	72235796	72246535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
tx.2161	chr10	+	2126	8	ISM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	123632	3252	-8830	1094	3prime_fragment	FALSE	canonical	3	22	junction_1	4.03049599419025	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATTGTGATGTTCCCCC	NA	False	NA	NA	False	NA	NA	NA	122638318	122778448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
tx.21610	chrX	+	1212	9	FSM	ENSMUSG00000067768.13	ENSMUST00000069077.10	1200	9	-12	0	4	0	multi-exon	FALSE	canonical	3	74	junction_1	80.9281123899477	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72257942	72266059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72258088_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
tx.21611	chrX	+	1189	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	78.4071903590481	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72257941	72266059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_72258064_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
tx.21612	chrX	-	3795	7	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-15	2	intron_retention	FALSE	canonical	3	944	junction_2	356.51012920003	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72309011	72298143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72305146_72306028_72306099_72306921_72307059_72308956
tx.21613	chrX	-	2419	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-18	2	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72309014	72298143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
tx.21614	chrX	-	1603	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	-18	-1	-18	1	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	367	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	NA	NA	NA	72309014	72298144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
tx.21615	chrX	-	1174	9	FSM	ENSMUSG00000067764.12	ENSMUST00000114503.9	1656	9	8	474	8	-474	multi-exon	TRUE	canonical	3	126	junction_7	127.059963698248	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGCATGCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	72336574	72326975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
tx.21616	chrX	+	5853	6	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	11.6206712370672	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTCTTTCTTGACTCAT	NA	False	NA	NA	False	NA	NA	NA	72386200	72402685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826_72396928_72397383
tx.21617	chrX	+	6309	5	FSM	ENSMUSG00000031365.14	ENSMUST00000114499.8	6284	5	-25	0	-25	0	multi-exon	FALSE	canonical	3	19	junction_2	9.63068014212911	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	NA	False	NA	NA	NA	72386201	72402686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826
tx.21618	chrX	+	6376	6	FSM	ENSMUSG00000031365.14	ENSMUST00000033731.4	6376	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	13.9226434271657	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	NA	False	NA	NA	NA	72386226	72402686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72386358_72388442_72388519_72394874_72394967_72395414_72395530_72396441_72396544_72396826
tx.21619	chrX	-	3718	2	Genic_Genomic	ENSMUSG00000096966.3	novel	2298	1	NA	NA	-2986	1252	multi-exon	FALSE	canonical	3	30	junction_1	0	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCACCACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	72445328	72438792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_-_72442387_72445204
tx.2162	chr10	-	6146	34	FSM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	-354	-490	4	88	multi-exon	FALSE	canonical	3	39	junction_22	24.7608209734668	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTACTTCTGATTTGC	NA	False	NA	NA	False	NA	NA	NA	122912284	122830975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
tx.21620	chrX	+	2733	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	-13	2	-13	-2	multi-exon	TRUE	canonical	3	583	junction_1	9.62635271879577	1113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGAGGTTGTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	72683011	72687118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
tx.21621	chrX	-	1636	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	-141	-3	-37	3	multi-exon	FALSE	canonical	3	9	junction_11	19.8644164606543	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGCTGAACTGGGTGT	NA	False	NA	NA	False	NA	NA	NA	72703471	72699596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
tx.21622	chrX	-	1510	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114472.8	1532	12	25	-3	25	2	multi-exon	FALSE	canonical	3	38	junction_11	13.5176652099123	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGCTGAACTGGGTG	NA	False	NA	NA	False	NA	NA	NA	72703698	72699597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
tx.21623	chrX	-	1440	11	NIC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	25	2	combination_of_known_splicesites	TRUE	canonical	2	5	junction_10	21.6148097377701	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGCTGAACTGGGTG	NA	False	NA	NA	False	NA	NA	NA	72703698	72699597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72703624
tx.21624	chrX	+	4354	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	16	0	intron_retention	FALSE	canonical	3	365	junction_8	42.9568301460705	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	72716771	72726108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_72717657_72719243_72719376_72720255_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
tx.21625	chrX	+	3934	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-620	0	15	0	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	748	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	72716770	72726108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
tx.21626	chrX	+	2860	11	ISM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	2921	0	-140	0	3prime_fragment	FALSE	canonical	3	360	junction_1	48.0316562279503	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	72720311	72726108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
tx.21627	chrX	-	1212	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	5	2	5	-2	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	1364	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTGTGTCTAACTG	NA	False	NA	NA	False	NA	NA	NA	72759776	72729785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
tx.21628	chrX	+	3639	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	7	2	7	-2	multi-exon	TRUE	canonical	3	38	junction_7	8.3901765016235	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCCTCCTGAACTTG	NA	False	NA	NA	False	NA	NA	NA	72760209	72782138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
tx.21629	chrX	+	2366	15	ISM	ENSMUSG00000031385.15	ENSMUST00000002079.7	6030	35	10377	4	1945	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	1.4638501094228	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATCTGAAGCCCCTGA	NA	False	NA	NA	False	NA	NA	NA	72811081	72816116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_72811279_72811386_72811488_72811563_72811788_72811945_72812125_72812295_72812363_72812739_72813068_72813207_72813312_72813395_72813493_72813861_72814041_72814184_72814346_72814700_72814849_72815016_72815082_72815148_72815225_72815351_72815427_72815751
tx.2163	chr10	-	6143	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-355	-277	3	87	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCTACTTCTGATTTG	NA	False	NA	NA	False	NA	NA	NA	122912285	122830976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
tx.21630	chrX	-	1323	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-6	-2	combination_of_known_junctions	TRUE	canonical	3	1072	junction_10	144.485579365652	546	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	72830509	72822570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
tx.21631	chrX	+	811	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	189	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5421	False	NA	NA	False	NA	NA	NA	72830622	72834430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
tx.21632	chrX	-	1381	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	37	0	4	0	multi-exon	FALSE	canonical	3	1767	junction_7	141.190120050944	1290	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	NA	False	NA	NA	NA	72974419	72965726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
tx.21633	chrX	-	8900	26	FSM	ENSMUSG00000031386.15	ENSMUST00000114372.3	8262	26	-639	1	-633	-1	multi-exon	FALSE	canonical	3	79	junction_7	97.9245913956244	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	NA	False	NA	NA	NA	73010596	72986403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
tx.21634	chrX	-	3171	8	ISM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	18157	3	146	0	3prime_fragment	FALSE	canonical	3	331	junction_7	56.7924973486995	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	NA	False	NA	NA	NA	72991806	72986400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447
tx.21635	chrX	-	4699	10	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-1090	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_8	113.119515077453	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	NA	False	NA	NA	NA	72993949	72986400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803
tx.21636	chrX	-	4541	10	FSM	ENSMUSG00000031386.15	ENSMUST00000128136.8	3480	10	-1061	0	-1061	0	multi-exon	FALSE	canonical	3	79	junction_7	130.872287194637	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	NA	False	NA	NA	NA	72993920	72986400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72991893_72992507_72992672_72992803
tx.21637	chrX	-	8758	26	FSM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	-623	3	-623	0	multi-exon	FALSE	canonical	3	303	junction_17	65.7475900699029	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	NA	False	NA	NA	NA	73010586	72986400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
tx.21638	chrX	-	8890	26	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-623	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_8	79.9086878881139	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	NA	False	NA	NA	NA	73010586	72986400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
tx.21639	chrX	-	4568	10	ISM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	16013	3	-1091	0	3prime_fragment	FALSE	canonical	3	318	junction_8	69.6052360737961	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	NA	False	NA	NA	NA	72993950	72986400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803
tx.2164	chr10	-	1814	10	FSM	ENSMUSG00000034602.16	ENSMUST00000219203.2	1844	10	4	26	4	-26	multi-exon	FALSE	canonical	3	125	junction_3	13.8884444373331	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATTTGTATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	122912284	122871218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
tx.21640	chrX	-	3937	15	FSM	ENSMUSG00000031392.19	ENSMUST00000033769.15	2890	15	4	-1051	4	-2	multi-exon	FALSE	canonical	3	23	junction_4	119.77847324566	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	73067515	73057525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
tx.21641	chrX	-	4009	13	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	272	junction_10	42.1586784264719	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	73067518	73057523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
tx.21642	chrX	-	3822	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	-4	7	-1	1	multi-exon	FALSE	canonical	3	90	junction_10	79.7365484565473	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAACCTATATGCCTTT	NA	False	NA	NA	False	NA	NA	NA	73067525	73057530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
tx.21643	chrX	-	3824	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	3	8	0	-4	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	256	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCTATATGCCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	73067521	73057527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
tx.21644	chrX	-	3751	14	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	36	junction_3	98.3373014276424	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCTATATGCCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	73067529	73057527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
tx.21645	chrX	-	3969	14	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	20	junction_9	101.479819896144	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTTTTAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	73067528	73057521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
tx.21646	chrX	-	5177	9	ISM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	-2	-576	-2	576	intron_retention	FALSE	canonical	3	311	junction_3	30.8170001784729	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCACATTAGCTGAGCA	NA	False	NA	NA	False	NA	NA	NA	73067526	73056943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790
tx.21647	chrX	-	1831	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	15	8692	15	4	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGAGTTTCGTGGCTTCG	NA	False	NA	NA	False	NA	NA	NA	73129260	73078889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
tx.21648	chrX	-	1718	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	25	-4	4	4	multi-exon	FALSE	canonical	3	119	junction_2	51.5	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGAGTTTCGTGGCTTCG	NA	False	NA	NA	False	NA	NA	NA	73129271	73078889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73080101_73080587_73080939_73129115
tx.21649	chrX	+	2534	13	FSM	ENSMUSG00000031397.12	ENSMUST00000010127.12	2473	13	-63	2	-63	-2	multi-exon	FALSE	canonical	2	11	junction_9	3.8151743807532	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTTATGCAGTTTGTG	6413	False	NA	NA	False	NA	NA	NA	73220801	73252104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73221030_73225389_73225505_73234827_73234926_73237124_73237317_73237399_73237528_73240589_73240784_73241245_73241411_73244203_73244361_73246136_73246268_73248479_73248564_73249479_73249577_73249950_73250071_73251279
tx.2165	chr10	-	4663	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	1	2	1	-2	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	514	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTAGTCTTTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	123032857	122947642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
tx.21650	chrX	-	4952	26	ISM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	10405	0	-167	0	3prime_fragment	FALSE	canonical	3	444	junction_18	77.9353988890799	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	NA	False	NA	NA	NA	73279735	73267068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225
tx.21651	chrX	-	8223	46	FSM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	122	0	-14	0	multi-exon	FALSE	canonical	3	440	junction_27	88.6461017644018	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	NA	False	NA	NA	NA	73290018	73267068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
tx.21652	chrX	+	1339	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	116	140	-7	-140	multi-exon	FALSE	canonical	3	248	junction_2	18.1592951405059	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTGATTCTTCCTACT	NA	False	NA	NA	False	NA	NA	NA	73298408	73301353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
tx.21653	chrX	+	1389	6	FSM	ENSMUSG00000001964.15	ENSMUST00000088313.5	1338	6	-27	-24	-7	24	multi-exon	FALSE	canonical	3	12	junction_5	106.854293315711	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAATATAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	73298408	73305178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73304387
tx.21654	chrX	+	819	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	-22	2	-22	-2	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTTGTTTCTGATTC	NA	False	NA	NA	False	NA	NA	NA	73314395	73316739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
tx.21655	chrX	+	857	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	-3	1	0	-1	multi-exon	FALSE	canonical	3	7516	junction_1	832.521615335001	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTGTTTCTGATTCT	NA	False	NA	NA	False	NA	NA	NA	73314462	73316740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
tx.21656	chrX	-	1515	8	FSM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	110	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	3.01018678652935	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTATGCTTAATTCAAT	NA	False	NA	NA	False	NA	NA	NA	73325232	73316822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644_73320949_73325126
tx.21657	chrX	+	1806	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	43	2	-10	1	multi-exon	FALSE	canonical	3	70	junction_7	76.3282385490455	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	73326345	73333755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
tx.21658	chrX	+	1753	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	-10	-1	-10	1	multi-exon	FALSE	canonical	3	81	junction_7	66.075241202738	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	73326345	73333755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
tx.21659	chrX	+	2129	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	30	30	-16	2	multi-exon	FALSE	canonical	3	647	junction_4	26.5934179176579	787	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTTCGTGTCACTCA	NA	False	NA	NA	False	NA	NA	NA	73340732	73348297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
tx.2166	chr10	-	4748	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	45	6732	3	-2	multi-exon	TRUE	canonical	3	236	junction_15	99.6636747895759	453	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTAGTCTTTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	123032855	122947642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
tx.21660	chrX	+	2687	9	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	-23	1	combination_of_known_junctions	TRUE	canonical	3	665	junction_4	23.6748812035034	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	NA	False	NA	NA	NA	73340725	73348296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
tx.21661	chrX	+	2413	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	253	0	-5	0	multi-exon	FALSE	canonical	3	553	junction_5	84.5884152824723	914	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6201	False	NA	NA	False	NA	NA	NA	73348856	73355468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
tx.21662	chrX	+	2672	10	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	728	junction_6	47.3648825477846	275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6201	False	NA	NA	False	NA	NA	NA	73348856	73355468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
tx.21663	chrX	+	1389	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	-4	-2	-4	2	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	522	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAACCTGCGCTTTATT	195	False	NA	NA	False	NA	NA	NA	73356634	73363757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
tx.21664	chrX	+	2592	11	ISM	ENSMUSG00000031398.14	ENSMUST00000154062.8	5561	29	6248	187	356	-187	3prime_fragment	FALSE	canonical	3	16	junction_2	6.01331855134916	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGTGCATGTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	73382310	73388102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
tx.21665	chrX	-	1115	2	FSM	ENSMUSG00000015289.5	ENSMUST00000114153.2	1997	2	-13	895	11	-9	multi-exon	FALSE	canonical	3	1433	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTATTTTCAGCCT	4504	False	NA	NA	False	NA	NA	NA	73397213	73395776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73396609_73396930
tx.21666	chrX	-	771	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	-25	0	-6	0	multi-exon	FALSE	canonical	3	109	junction_1	662	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGCCTCTAAATTTT	4511	False	NA	NA	False	NA	NA	NA	73397206	73395767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73396105_73396450_73396609_73396930
tx.21667	chrX	-	746	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	13	2	-11	-1	multi-exon	FALSE	canonical	3	1433	junction_2	31	277	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGCCTCTAAATTT	4506	False	NA	NA	False	NA	NA	NA	73397211	73395768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73396105_73396479_73396609_73396930
tx.21668	chrX	-	2080	5	NNC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	-18	10263	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	731.195724481482	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCATAGGTGTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	73412137	73399060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_73400570_73411052_73411193_73411306_73411516_73411758_73411865_73412021
tx.21669	chrX	-	2200	3	FSM	ENSMUSG00000015290.16	ENSMUST00000126117.2	2220	3	21	-1	21	0	multi-exon	FALSE	canonical	3	33	junction_2	782.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	NA	False	NA	NA	NA	73412143	73409323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73411193_73411306_73411516_73412021
tx.2167	chr10	+	3947	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-56	125	-22	0	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	189	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGAAGTTTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	125802065	125851103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
tx.21670	chrX	-	2646	2	ISM	ENSMUSG00000015290.16	ENSMUST00000126117.2	2220	3	81	-1	-11	0	intron_retention	FALSE	canonical	3	1598	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	NA	False	NA	NA	NA	73412083	73409323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_73411193_73411306
tx.21671	chrX	-	2304	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	138	0	-22	0	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	425	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	NA	False	NA	NA	NA	73412141	73409323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
tx.21672	chrX	-	1973	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	45	5	1	-5	multi-exon	FALSE	canonical	3	11	junction_2	8.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGCAAGCTCGGGTCCC	NA	False	NA	NA	False	NA	NA	NA	73416910	73412827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73414618_73416219_73416289_73416796
tx.21673	chrX	-	1847	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	49	3	32	-3	multi-exon	FALSE	canonical	3	109	junction_1	16.2322017915007	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGAGAGTCAAGGGTG	NA	False	NA	NA	False	NA	NA	NA	73436829	73428327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
tx.21674	chrX	-	1509	10	NIC	ENSMUSG00000031399.16	novel	814	9	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	35.9828491381487	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAGAGTCAAGGGTGGT	NA	False	NA	NA	False	NA	NA	NA	73436840	73428325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280_73436354_73436704
tx.21675	chrX	+	3409	11	NIC	ENSMUSG00000004221.17	novel	6788	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	43.5340096935718	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGGGGTTTGGGCTTAT	NA	False	NA	NA	False	NA	NA	NA	73436897	73493893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_73437012_73471367_73471481_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
tx.21676	chrX	-	2375	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	274	3	-40	-3	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	336	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGTCTCCTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	73472526	73453091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
tx.21677	chrX	+	3305	10	FSM	ENSMUSG00000004221.17	ENSMUST00000064407.10	4530	10	-6	1231	-6	3	multi-exon	FALSE	canonical	3	18	junction_3	31.82591536608	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGTTTGGGCTTATAT	NA	False	NA	NA	False	NA	NA	NA	73473303	73493895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
tx.21678	chrX	+	4541	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	27	-1236	-6	2	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCACTCTGTCCTCCCT	NA	False	NA	NA	False	NA	NA	NA	73473303	73495128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
tx.21679	chrX	-	1674	3	Genic_Genomic	ENSMUSG00000082910.2	novel	138	1	NA	NA	-1176	961	multi-exon	FALSE	canonical	3	12	junction_1	0.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTGTTGTTCTTTC	4395	False	NA	NA	False	NA	NA	NA	73820604	73818329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_-_73819430_73819605_73819735_73820159
tx.2168	chr10	-	1051	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	-6	-2	1	2	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATTTTTTGGCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	126737223	126723115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
tx.21680	chrX	-	1716	3	FSM	ENSMUSG00000032750.14	ENSMUST00000127024.2	750	3	-27	-939	-27	0	multi-exon	FALSE	canonical	3	11	junction_2	2	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTTCTTAGTTTTT	2152	False	NA	NA	False	NA	NA	NA	74012758	74010448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_74011592_74011767_74011897_74012314
tx.21681	chrX	+	2598	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	206	0	7	0	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	2221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	-59	True	NA	NA	NA	74139665	74153383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
tx.21682	chrX	+	6387	9	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1536	junction_3	521.677687250471	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	-40	True	NA	NA	NA	74139684	74153383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
tx.21683	chrX	-	1970	12	FSM	ENSMUSG00000031402.13	ENSMUST00000033775.9	2525	12	14	541	14	374	multi-exon	FALSE	canonical	3	210	junction_6	19.4626151487859	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGACCCTGTAACTCCA	NA	False	NA	NA	False	NA	NA	NA	74174608	74153879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
tx.21684	chrX	+	2544	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	16	2	-7	-2	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTCAGACTCCACTT	553	False	NA	NA	False	NA	NA	NA	74426020	74440063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
tx.21685	chrX	-	2580	7	NIC	ENSMUSG00000031200.17	novel	980	6	NA	NA	4	5598	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	21.2243309016379	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	NA	NA	NA	74460190	74448451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_74448825_74453151_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460143
tx.21686	chrX	-	7130	5	NIC	ENSMUSG00000031200.17	novel	1592	5	NA	NA	6	5598	intron_retention	FALSE	canonical	3	22	junction_2	23.8222584991432	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	NA	NA	NA	74460188	74448451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_74448825_74453151_74454738_74454823_74454876_74454957_74455129_74455240
tx.21687	chrX	-	685	4	FSM	ENSMUSG00000090110.9	ENSMUST00000149863.3	507	4	2	-180	2	0	multi-exon	FALSE	canonical	3	61	junction_2	9.20144916122817	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	NA	NA	NA	74460188	74448451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_74448825_74453151_74453220_74459620_74459820_74460143
tx.21688	chrX	-	1483	6	FSM	ENSMUSG00000031200.17	ENSMUST00000114081.2	980	6	5	-508	5	175	multi-exon	FALSE	canonical	3	22	junction_1	14.0370937162933	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTTGCGTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	74460189	74453874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460143
tx.21689	chrX	+	1072	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	1	1701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	519.51988756952	15	3	1	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGGTCATGGTATTTT	NA	False	NA	NA	False	NA	NA	NA	74460306	74499308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74499157
tx.2169	chr10	+	4594	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	223	0	-89	0	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	438	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	126814808	126835838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
tx.21690	chrX	+	4240	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	263	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTTTATGACTTTGG	NA	False	NA	NA	False	NA	NA	NA	74460305	74497607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
tx.21691	chrX	+	4938	11	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-5	1701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	516.553036967164	26	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGGTCATGGTATTTT	NA	False	NA	NA	False	NA	NA	NA	74460297	74499308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289_74498147_74499157
tx.21692	chrX	+	920	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	1	-591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	482.141819774016	116	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTAATATTTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	74460303	74493747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
tx.21693	chrX	+	4219	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	487.484573988289	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATCTTTATGACTTTG	NA	False	NA	NA	False	NA	NA	NA	74460306	74497606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_74460448_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
tx.21694	chrX	+	1561	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	29	5	11	-5	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	1374	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGCCTGACAATTTTT	NA	False	NA	NA	False	NA	NA	NA	74557933	74578543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
tx.21695	chrX	-	3117	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	23	9	23	0	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	546	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTCTACTCTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	74918765	74829268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
tx.21696	chrX	+	5444	17	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-143	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	145.192921228964	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	76554475	76706590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
tx.21697	chrX	+	5397	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-162	-1	-162	1	multi-exon	TRUE	canonical	3	377	junction_1	40.4669412401448	772	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	76554456	76706590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
tx.21698	chrX	+	4983	15	ISM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	122532	-5	122331	5	3prime_fragment	FALSE	canonical	3	437	junction_14	32.0239068860265	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGACTGTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	76677150	76706594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
tx.21699	chrX	+	4562	12	ISM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	135255	0	135054	0	3prime_fragment	FALSE	canonical	3	437	junction_11	32.6073560630341	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	76689873	76706589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
tx.217	chr1	-	2396	6	NIC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	66.5924920693016	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGTAACAAATTT	4716	False	NA	NA	False	NA	NA	NA	39616487	39590376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_39591597_39594558_39594752_39599773_39599857_39603128_39603198_39604162_39604414_39615907
tx.2170	chr10	+	3151	2	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	1061	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	69	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	126832542	126835838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_126835202_126835346
tx.21700	chrX	-	4036	7	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	27	439	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.7800404448525	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	76839551	76804577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76825643_76825908_76829733_76829903_76839153
tx.21701	chrX	-	4319	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	266	-439	-40	439	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	76839618	76804577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
tx.21702	chrX	-	3897	4	FSM	ENSMUSG00000047996.17	ENSMUST00000114024.9	3900	4	3	0	1	0	multi-exon	FALSE	canonical	3	8	junction_1	4.64279609239471	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTTTTTCTTATATA	NA	False	NA	NA	False	NA	NA	NA	77627499	77493218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_77496779_77527356_77527518_77564376_77564428_77627374
tx.21703	chrX	-	1722	3	FSM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	1	2	1	-2	multi-exon	FALSE	canonical	3	241	junction_2	42	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGCTCTCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	78679187	78666838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_78668390_78671446_78671527_78679096
tx.21704	chrX	-	1942	4	FSM	ENSMUSG00000046942.18	ENSMUST00000052283.7	1854	4	-88	0	-88	0	multi-exon	FALSE	canonical	3	76	junction_2	116.448367194316	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	78715129	78666836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_78668390_78671446_78671527_78685326_78685395_78714888
tx.21705	chrX	+	4068	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-63	2	-45	-2	multi-exon	TRUE	canonical	3	148	junction_2	10.5	341	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTCTTACTTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	80114258	80141476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_80114767_80127896_80128038_80138057
tx.21706	chrX	-	1012	4	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	51.8737784327389	21	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAAGGGTTCTTCTTT	1162	False	NA	NA	False	NA	NA	NA	83486714	83458140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chrX_-_83458730_83459197_83459397_83473568_83473652_83486573
tx.21707	chrX	-	3129	3	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	63.5	11	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCTGTGGTTTTTGCAT	1164	False	NA	NA	False	NA	NA	NA	83486712	83467130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chrX_-_83470038_83473568_83473652_83486573
tx.21708	chrX	+	4536	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	502	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	NA	False	NA	NA	NA	84091897	84248654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
tx.21709	chrX	+	6516	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-57	-8	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	16.9297750708808	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCTACATTCTGCATCT	NA	False	NA	NA	False	NA	NA	NA	84617570	84678067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_84617772_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
tx.2171	chr10	-	1186	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	15	5	15	-5	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	472	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCTTAATGTGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	126866694	126858205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
tx.21710	chrX	+	6364	8	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-63	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	36.8604649665603	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCTGCATCTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	84617564	84678073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_84617772_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
tx.21711	chrX	+	6409	9	FSM	ENSMUSG00000035476.10	ENSMUST00000048250.10	6364	9	-54	9	-54	-9	multi-exon	FALSE	canonical	3	35	junction_2	26.186828750347	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTCTACATTCTGCATC	NA	False	NA	NA	False	NA	NA	NA	84617573	84678066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_84617772_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
tx.21712	chrX	+	5601	6	ISM	ENSMUSG00000035476.10	ENSMUST00000048250.10	6364	9	40303	9	40175	-9	3prime_fragment	FALSE	canonical	3	98	junction_4	9.15204895091804	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTCTACATTCTGCATC	NA	False	NA	NA	False	NA	NA	NA	84657930	84678066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
tx.21713	chrX	-	3610	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-23	658	-7	-658	multi-exon	TRUE	canonical	3	125	junction_19	13.2977827073068	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	NA	False	NA	NA	NA	84820266	84746200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
tx.21714	chrX	-	3544	19	FSM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	137	659	-29	-659	multi-exon	FALSE	canonical	3	19	junction_1	33.6576812358314	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	NA	False	NA	NA	NA	84820288	84746201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
tx.21715	chrX	-	3680	21	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	6	-659	combination_of_known_junctions	FALSE	canonical	3	6	junction_17	45.7159436083299	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	NA	False	NA	NA	NA	84820253	84746201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
tx.21716	chrX	-	3641	20	NNC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-25	-658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	36.6776781920874	27	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	NA	False	NA	NA	NA	84820284	84746200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780969_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
tx.21717	chrX	+	1798	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	10	0	10	0	multi-exon	FALSE	canonical	3	839	junction_1	0	953	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGAGAGTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	85235379	85239553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_85236581_85238956
tx.21718	chrX	-	2169	3	NNC	ENSMUSG00000035427.19	novel	2401	3	NA	NA	-22	-49161	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	13	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTTTGCTCAATAG	NA	False	NA	NA	False	NA	NA	NA	85348721	85343022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_85344996_85347819_85347902_85348607
tx.21719	chrX	-	1520	2	Genic_Genomic	ENSMUSG00000080069.3	novel	1023	1	NA	NA	-9162	380	multi-exon	FALSE	canonical	3	24	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAATGACTCAGATGTTT	NA	False	NA	NA	False	NA	NA	NA	85398613	85388048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_-_85389457_85398501
tx.2172	chr10	+	1767	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	24	0	-1	0	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGAGTGTTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	126877824	126882234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
tx.21720	chrX	+	634	2	Intergenic	novelGene_406	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTCTTTCTGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	88052001	88080609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_88052327_88080300
tx.21721	chrX	-	5348	37	FSM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	-1	-1	-1	1	multi-exon	FALSE	canonical	3	370	junction_20	43.7489682418023	825	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4276	False	NA	NA	False	NA	NA	NA	92675762	92348371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
tx.21722	chrX	-	4621	27	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	-1	-36447	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	91.9050835302282	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCTCTTCCCTGTTTT	4276	False	NA	NA	False	NA	NA	NA	92675762	92560542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
tx.21723	chrX	+	4835	8	FSM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	53	0	53	0	multi-exon	FALSE	canonical	3	56	junction_6	4.01527694930148	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGCCTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	92718760	92793557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
tx.21724	chrX	-	2070	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	27	18	27	-18	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	484	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGAATTTCTCACTTA	NA	False	NA	NA	False	NA	NA	NA	92875780	92808230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
tx.21725	chrX	+	5445	2	Antisense	novelGene_ENSMUSG00000083114.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTAGTGGCCTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	93024167	93029940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chrX_+_93024327_93024654
tx.21726	chrX	-	6675	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26933	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	39.1371215818727	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACCCTAGTGGAGTG	NA	False	NA	NA	False	NA	NA	NA	93194241	93118243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93194153
tx.21727	chrX	-	6970	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	28	4	-4	-3	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCCTAGTGGAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	93166985	93118240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
tx.21728	chrX	-	6898	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	441	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	38.1308167192032	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCTAGTGGAGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	93166065	93118239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93165758
tx.21729	chrX	-	7090	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	316	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	37.8200922130023	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCCTAGTGGAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	93166190	93118240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93165758
tx.2173	chr10	+	4100	3	NIC	ENSMUSG00000006732.15	novel	1089	5	NA	NA	-9	-11	intron_retention	FALSE	canonical	3	390	junction_1	19	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTTATGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	126877816	126882223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_126880739_126880894_126880997_126881147
tx.21730	chrX	-	6922	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	8	3	8	-3	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCCTAGTGGAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	93167005	93118240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
tx.21731	chrX	-	3588	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	58	1	0	-1	multi-exon	TRUE	canonical	3	1008	junction_2	64.9970120101527	1284	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTGTGCCCATGTGTT	NA	False	NA	NA	False	NA	NA	NA	93256257	93232313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
tx.21732	chrX	+	1295	5	FSM	ENSMUSG00000043929.17	ENSMUST00000113911.9	1227	5	-68	0	-5	0	multi-exon	FALSE	canonical	3	23	junction_4	15.1224171348366	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGCCTGGCATGTTT	NA	False	NA	NA	False	NA	NA	NA	93278527	93297673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020_93296733_93297545
tx.21733	chrX	+	4665	4	FSM	ENSMUSG00000043929.17	ENSMUST00000096369.10	3944	4	-59	-662	1	662	multi-exon	FALSE	canonical	3	48	junction_2	6.59966329107444	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	93278533	93300236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020
tx.21734	chrX	+	6531	5	Fusion	ENSMUSG00000043929.17_ENSMUSG00000099072.3	novel	1227	5	NA	NA	0	0	multi-exon	FALSE	canonical	3	16	junction_4	17.9652442232217	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTCTTTAACTGATTAT	NA	False	NA	NA	False	NA	NA	NA	93278532	93321330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020_93296733_93315961
tx.21735	chr5	-	194	1	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAAAGAGCATTTGCC	NA	False	NA	NA	False	NA	NA	NA	98457106	98456912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_98456900_98457100
tx.21736	chrX	+	920	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	-9	-127	-9	-5	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCTGGCCTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	93410713	93460694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
tx.21737	chrX	-	2716	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	104	1	-36	-1	multi-exon	TRUE	canonical	3	1240	junction_10	166.264514821681	1994	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGCTTCTCATCT	NA	False	NA	NA	False	NA	NA	NA	93585645	93579080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
tx.21738	chrX	+	3625	4	NIC	ENSMUSG00000071723.8	novel	1925	5	NA	NA	-20	3	intron_retention	FALSE	canonical	2	4	junction_1	4.71404520791032	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTGGTCATAATTTT	4236	False	NA	NA	False	NA	NA	NA	93679654	93686853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_93681987_93682698_93682841_93684531_93685195_93686365
tx.21739	chrX	-	8481	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	14	1	14	-1	multi-exon	FALSE	canonical	3	18	junction_1	0	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAAGTGTTTTCTTGTTG	NA	False	NA	NA	False	NA	NA	NA	94488464	94463924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_94472205_94488263
tx.2174	chr10	-	3036	4	FSM	ENSMUSG00000040502.6	ENSMUST00000040307.6	3037	4	-13	14	-13	-14	multi-exon	TRUE	canonical	3	10	junction_3	2.16024689946929	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGCTAAAGTCAGACCCA	9906	False	NA	NA	False	NA	NA	NA	126896066	126890893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_126892781_126893300_126893494_126894088_126894245_126895266
tx.21740	chrX	-	2149	5	FSM	ENSMUSG00000035062.14	ENSMUST00000044382.7	2219	5	76	-6	-25	0	multi-exon	FALSE	canonical	3	32	junction_1	3.76662979332984	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGAGTGCATTCTG	957	False	NA	NA	False	NA	NA	NA	94702039	94682798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_94684258_94685769_94685933_94686913_94687087_94688912_94689085_94701857
tx.21741	chrX	-	2534	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	10	-14	10	14	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	1197	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGAGATGAGGGATGT	NA	False	NA	NA	False	NA	NA	NA	95000509	94978926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
tx.21742	chrX	-	2980	4	Intergenic	novelGene_407	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	1.24721912892465	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGTATGTGTAAGATT	NA	False	NA	NA	False	NA	NA	NA	95009671	95004071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695
tx.21743	chrX	-	2676	5	Intergenic	novelGene_408	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_4	7.15454401062709	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATGTGTATGTGTAAGA	NA	False	NA	NA	False	NA	NA	NA	95011571	95004073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008875_95011076
tx.21744	chrX	-	2338	5	Intergenic	novelGene_409	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_4	9.30053761886914	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATGTGTATGTGTAAGA	NA	False	NA	NA	False	NA	NA	NA	95012243	95004073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008875_95012086
tx.21745	chrX	+	3842	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	1	-1	1	1	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	2561	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	95139648	95212159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
tx.21746	chrX	-	2999	12	FSM	ENSMUSG00000045802.14	ENSMUST00000059003.5	1479	12	-169	-1351	-169	6	multi-exon	FALSE	canonical	2	9	junction_1	7.96998501611043	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGCATCATGTCCTT	NA	False	NA	NA	False	NA	NA	NA	95411694	95349777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_95351419_95355322_95355384_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400850_95411426
tx.21747	chrX	-	2942	11	NIC	ENSMUSG00000045802.14	novel	1479	12	NA	NA	-178	1	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	7.69675256195754	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTCATGGCATCATG	NA	False	NA	NA	False	NA	NA	NA	95411703	95349782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_95351419_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400850_95411426
tx.21748	chrX	-	4750	8	FSM	ENSMUSG00000034457.11	ENSMUST00000037353.10	4752	8	5	-3	5	3	multi-exon	FALSE	canonical	3	19	junction_1	34.3130843134516	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	NA	False	NA	NA	NA	96420817	96377442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
tx.21749	chrX	-	6110	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	-3	-3954	-3	3	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	NA	False	NA	NA	NA	96420825	96377442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
tx.2175	chr10	+	1376	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	42	635	-27	-12	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	3726	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGTCTTTATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	126899444	126903154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
tx.21750	chrX	-	3859	25	FSM	ENSMUSG00000031214.14	ENSMUST00000033560.9	7170	25	-32	3343	8	631	multi-exon	FALSE	canonical	1	4	junction_23	4.90959944055181	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGGTCAAATGTTAGGA	NA	False	NA	NA	False	NA	NA	NA	97934623	97601225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986
tx.21751	chrX	+	4681	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	422	108	-24	-108	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	346	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCTACTCTAGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	97981788	97992515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
tx.21752	chrX	+	5111	15	NNC	ENSMUSG00000031216.14	novel	4963	14	NA	NA	33	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	14.1452018258446	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGGAGAGTTTG	NA	False	NA	NA	False	NA	NA	NA	98086219	98118334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_98086401_98092386_98092568_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
tx.21753	chrX	+	4911	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	52	0	52	0	multi-exon	FALSE	canonical	3	27	junction_1	6.60016137511158	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGGAGAGTTTG	NA	False	NA	NA	False	NA	NA	NA	98086238	98118334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
tx.21754	chrX	+	4455	10	ISM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	23051	2	-2976	-2	3prime_fragment	FALSE	canonical	3	36	junction_4	5.59761854124889	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGCTCTGGAGAGTT	NA	False	NA	NA	False	NA	NA	NA	98109237	98118332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
tx.21755	chrX	+	3291	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	-48	15	-48	-15	multi-exon	FALSE	canonical	3	33	junction_1	5.76085931090146	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGAGAACTAAAA	NA	False	NA	NA	False	NA	NA	NA	98179687	98192582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
tx.21756	chrX	-	1761	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-25	372	-20	4	multi-exon	FALSE	canonical	3	92	junction_1	143.5	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	98514318	98509715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_98511189_98511728_98511921_98514222
tx.21757	chrX	-	2580	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	-13	-4	-13	4	multi-exon	FALSE	canonical	3	84	junction_1	0	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	98514311	98509715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_98512207_98514222
tx.21758	chrX	-	2301	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	23	342	-20	4	multi-exon	FALSE	canonical	3	379	junction_1	0	405	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	98514318	98509715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_98511921_98514222
tx.21759	chrX	+	4740	3	FSM	ENSMUSG00000071719.3	ENSMUST00000096363.3	3909	3	-832	1	-832	-1	multi-exon	FALSE	canonical	3	13	junction_2	4.5	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTCTCTTGGTGGATT	NA	False	NA	NA	False	NA	NA	NA	98863794	98892395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_98865533_98888994_98889167_98889565
tx.2176	chr10	-	1571	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	-24	9	-24	-9	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	550	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGTCTTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	126906157	126903157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
tx.21760	chrX	+	4387	7	ISM	ENSMUSG00000059327.10	ENSMUST00000113779.8	4955	8	334385	0	-75152	0	3prime_fragment	FALSE	canonical	2	9	junction_6	6.54259547546351	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGACATTATCTTGAGC	NA	False	NA	NA	False	NA	NA	NA	99353596	99444366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438756_99440510
tx.21761	chrX	-	1940	10	NNC	ENSMUSG00000031220.15	novel	1984	8	NA	NA	-51453	-269	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	5.07231653800592	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTCCAGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	99537776	99446100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_99446547_99446745_99446946_99447736_99447912_99448134_99448340_99448564_99448636_99449191_99449303_99467905_99468055_99474860_99475030_99488875_99489014_99537500
tx.21762	chrX	+	1343	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	54	121	-10	-121	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	270	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTATCCGCTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	99537950	99559610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
tx.21763	chrX	-	4746	6	NIC	ENSMUSG00000015668.14	novel	1626	7	NA	NA	-4	3525	intron_retention	FALSE	canonical	3	301	junction_5	107.152974760386	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGGTTGCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	99669548	99662963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_99667034_99667188_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
tx.21764	chrX	-	1072	7	FSM	ENSMUSG00000015668.14	ENSMUST00000059099.7	1041	7	-6	-25	-3	0	multi-exon	FALSE	canonical	3	137	junction_6	158.307366291724	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	NA	False	NA	NA	NA	99669547	99666488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
tx.21765	chrX	-	1002	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	627	-3	-3	0	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	NA	False	NA	NA	NA	99669547	99666488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
tx.21766	chrX	+	5173	29	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	328	-1	intron_retention	TRUE	canonical	3	204	junction_20	20.4419287000907	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAGGAGATCCTTCTA	NA	False	NA	NA	False	NA	NA	NA	99669670	99770819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
tx.21767	chrX	+	4630	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	353	0	353	0	multi-exon	FALSE	canonical	3	204	junction_20	20.3345386022518	508	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGAGATCCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	99669695	99770820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
tx.21768	chrX	+	3977	14	FSM	ENSMUSG00000000881.13	ENSMUST00000113735.3	3692	14	-283	-2	-283	0	multi-exon	FALSE	canonical	3	21	junction_2	29.3332212656995	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTCAGAGGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	99818063	99862016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_99818551_99819412_99819570_99819984_99820088_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
tx.21769	chrX	+	3379	12	FSM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	-63	0	-63	0	multi-exon	FALSE	canonical	3	72	junction_1	11.5078126534158	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGCTCAGAGGTCTT	636	False	NA	NA	False	NA	NA	NA	99820827	99862014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
tx.2177	chr10	+	345	2	FSM	ENSMUSG00000112639.2	ENSMUST00000217874.2	329	2	-14	-2	-14	2	multi-exon	FALSE	canonical	3	25	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTCTTTTTAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	126906335	126906972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_126906494_126906785
tx.21770	chrX	-	3271	30	FSM	ENSMUSG00000009670.12	ENSMUST00000009814.10	3250	30	-20	-1	8	1	multi-exon	TRUE	canonical	3	57	junction_17	8.2193472636908	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATTGATCAGCTGATTT	NA	False	NA	NA	False	NA	NA	NA	100103265	99882252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
tx.21771	chrX	-	4590	25	FSM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	7	-2006	7	2006	multi-exon	FALSE	canonical	3	11	junction_1	14.9015286315047	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGGTCATGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	100103266	99919481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_99921832_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
tx.21772	chrX	-	3810	10	ISM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	1	-18	1	6	intron_retention	FALSE	canonical	3	1326	junction_4	64.7893071500819	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	NA	NA	NA	100128977	100122809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753
tx.21773	chrX	-	2242	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	0	-10	0	-2	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	1497	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAAACCTGTCCTGTTC	NA	False	NA	NA	False	NA	NA	NA	100128978	100122817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
tx.21774	chrX	-	1095	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	23	-4	19	4	multi-exon	FALSE	canonical	3	192	junction_2	126.702170462861	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGCTAGTTTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	100266136	100141387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
tx.21775	chrX	-	958	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	44	0	30	0	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	NA	False	NA	NA	NA	100266125	100255564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
tx.21776	chrX	-	2399	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	16	0	16	0	multi-exon	FALSE	canonical	3	422	junction_3	23.8094285712381	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	NA	False	NA	NA	NA	100266139	100255564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
tx.21777	chrX	+	6990	45	FSM	ENSMUSG00000079487.12	ENSMUST00000087948.11	6809	45	-188	7	42	-7	multi-exon	TRUE	canonical	2	86	junction_14	18.8047135597997	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	False	NA	NA	False	NA	NA	NA	100317677	100341064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
tx.21778	chrX	+	1556	2	FSM	ENSMUSG00000047797.15	ENSMUST00000119190.2	1585	2	25	4	25	-4	multi-exon	FALSE	canonical	2	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGGTGTTTTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	100427366	100429231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_100427449_100427757
tx.21779	chrX	-	5498	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_18	23.4366388730694	91	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	NA	False	NA	NA	NA	100463449	100447990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
tx.2178	chr10	-	2632	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	-3	-2	-3	0	multi-exon	FALSE	canonical	3	78	junction_3	48.7011398265807	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	False	NA	NA	False	NA	NA	NA	126957003	126931518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
tx.21780	chrX	+	2433	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	128	1	-52	-1	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	3986	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	100473288	100492196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
tx.21781	chrX	+	7230	38	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	13	-5	intron_retention	FALSE	canonical	3	145	junction_4	48.5611826331382	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	4128	False	NA	NA	False	NA	NA	NA	100576377	100644635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
tx.21782	chrX	+	7145	38	FSM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	58	7	33	-7	multi-exon	FALSE	canonical	3	80	junction_4	54.4176286265063	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	4148	False	NA	NA	False	NA	NA	NA	100576397	100644633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
tx.21783	chrX	+	5248	23	FSM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	3	-1411	1	0	multi-exon	FALSE	canonical	3	98	junction_1	138.801667470395	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	100683668	100727957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
tx.21784	chrX	+	5353	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	29	2	-1	-2	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	100683698	100727955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
tx.21785	chrX	+	5280	23	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	134.849288387119	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGGCTTGGTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	100683663	100727954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
tx.21786	chrX	+	5324	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	162	junction_1	123.579218031398	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	100683697	100727955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
tx.21787	chrX	+	6954	18	ISM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	13237	0	-2044	0	3prime_fragment	FALSE	canonical	3	266	junction_15	98.6391136440531	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	100696906	100727957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
tx.21788	chrX	+	2293	5	Intergenic	novelGene_410	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	6.49519052838329	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTCTGGTTGAAGTT	9260	False	NA	NA	False	NA	NA	NA	100739443	100749801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884
tx.21789	chrX	-	2869	4	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	142	junction_3	69.5317673201729	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838041	100833953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_100834130_100834212_100835250_100835786_100835944_100836542
tx.2179	chr10	-	2468	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	-10	0	-4	0	multi-exon	FALSE	canonical	3	172	junction_9	22.2351605990131	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	False	NA	NA	False	NA	NA	NA	126957004	126931518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
tx.21790	chrX	-	2260	6	NIC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	117	junction_2	83.8035798758024	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838049	100833954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_100834130_100834212_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
tx.21791	chrX	-	2603	5	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-22	0	intron_retention	FALSE	canonical	3	142	junction_4	69.9052930757035	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838051	100833953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_100834130_100834212_100834891_100835166_100835250_100835786_100835944_100836542
tx.21792	chrX	-	2012	6	FSM	ENSMUSG00000045010.15	ENSMUST00000147742.9	1991	6	-22	1	-22	-1	multi-exon	FALSE	canonical	3	142	junction_5	73.271003814606	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838051	100833954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_100834130_100834212_100834255_100834844_100834891_100835166_100835250_100835786_100835944_100836542
tx.21793	chrX	+	2036	7	FSM	ENSMUSG00000046774.18	ENSMUST00000163399.8	1991	7	-42	-3	-42	-1	multi-exon	FALSE	canonical	3	67	junction_5	79.7050116924205	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838219	100842247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
tx.21794	chrX	+	2222	6	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-42	0	intron_retention	FALSE	canonical	3	236	junction_4	22.2656686403081	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838219	100842248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
tx.21795	chrX	+	3423	3	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	266	junction_1	8.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838219	100842247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_100840444_100840965_100841990_100842072
tx.21796	chrX	+	2835	4	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-43	-1	intron_retention	FALSE	canonical	3	266	junction_2	15.121728296285	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838218	100842247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_100839695_100840283_100840444_100840965_100841990_100842072
tx.21797	chrX	+	3945	2	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	283	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838219	100842247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_100841990_100842072
tx.21798	chrX	+	2497	5	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-43	1	intron_retention	FALSE	canonical	3	236	junction_3	24.5662369930765	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838218	100842249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_100839695_100840283_100840444_100840965_100841368_100841707_100841990_100842072
tx.21799	chrX	+	467	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	22	0	22	0	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTTTTCTATTTTGT	NA	False	NA	NA	False	NA	NA	NA	101163074	101171275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
tx.218	chr1	+	4379	30	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	23.9127924112531	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	39940056	40064129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
tx.2180	chr10	+	2923	10	NIC	ENSMUSG00000006731.11	novel	2395	11	NA	NA	-44	0	intron_retention	FALSE	canonical	3	39	junction_5	12.6383699527165	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTACTTGTGTCTCTGTG	310	False	NA	NA	False	NA	NA	NA	127001049	127008199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
tx.21800	chrX	-	4074	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	-13	1241	-13	-1241	multi-exon	FALSE	canonical	3	249	junction_1	0	485	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTCCATTCATTTTC	NA	False	NA	NA	False	NA	NA	NA	101200710	101186562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_101190440_101200513
tx.21801	chrX	-	904	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	70	1	12	-1	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	4551	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	101232930	101228547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
tx.21802	chrX	-	810	3	FSM	ENSMUSG00000051159.17	ENSMUST00000050551.10	901	3	87	4	87	-4	multi-exon	FALSE	canonical	3	131	junction_2	38	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAACTGCCTGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	101295700	101290990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_101291615_101292168_101292294_101295639
tx.21803	chrX	-	1189	3	FSM	ENSMUSG00000051159.17	ENSMUST00000101336.10	1090	3	-78	-21	-12	-2	multi-exon	FALSE	canonical	3	50	junction_2	78.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGCCTGGGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	101295536	101290988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_101291615_101292168_101292294_101295098
tx.21804	chrX	-	1727	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	210	-1	-3	1	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTCCCACCGCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	101548755	101328243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
tx.21805	chrX	-	1691	10	NNC	ENSMUSG00000067567.13	novel	686	7	NA	NA	-20	13584	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	19.2700112437262	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGGAATAACTTGGA	NA	False	NA	NA	False	NA	NA	NA	101548772	101435668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_101436253_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
tx.21806	chrX	-	6077	32	NIC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	17	18	combination_of_known_splicesites	TRUE	canonical	1	6	junction_5	13.5917891600127	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTTATCTGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	101687835	101557562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
tx.21807	chrX	-	6119	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	-6	2	-6	-2	multi-exon	FALSE	canonical	3	40	junction_24	10.1886502418132	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTCTGGTGTTACTGCA	NA	False	NA	NA	False	NA	NA	NA	101687858	101557582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
tx.21808	chrX	-	4504	3	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	-7	3	intron_retention	FALSE	canonical	3	181	junction_2	11	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCCAGGTCTTCACTG	NA	False	NA	NA	False	NA	NA	NA	101898229	101891241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_101891758_101893920_101895315_101895635
tx.21809	chrX	+	1615	9	FSM	ENSMUSG00000067562.12	ENSMUST00000118218.8	1611	9	4	-8	4	8	multi-exon	FALSE	canonical	0	0	junction_2	65.1257197656963	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	NA	NA	NA	101846572	101853556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_101846761_101846861_101847052_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
tx.2181	chr10	+	2310	10	FSM	ENSMUSG00000006731.11	ENSMUST00000217678.2	2212	10	-94	-4	-92	4	multi-exon	FALSE	canonical	3	10	junction_5	17.4384278371675	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTCTCTGTGGTAC	262	False	NA	NA	False	NA	NA	NA	127001001	127008203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
tx.21810	chrX	+	2963	7	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	11	8	intron_retention	FALSE	canonical	3	157	junction_5	15.0959891656323	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	NA	NA	NA	101846579	101853556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
tx.21811	chrX	+	1455	8	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	44.698993277254	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	NA	NA	NA	101846570	101853556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_101846789_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
tx.21812	chrX	+	4488	3	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	8	2	intron_retention	FALSE	canonical	3	178	junction_1	13	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCCAGGTCTTCACT	NA	False	NA	NA	False	NA	NA	NA	101846576	101853550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_101849156_101849476_101850871_101853035
tx.21813	chrX	-	2998	7	ISM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	-24	-8	-24	8	intron_retention	FALSE	canonical	3	158	junction_2	13.9363633069113	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	NA	NA	NA	101898246	101891236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311
tx.21814	chrX	-	4911	4	FSM	ENSMUSG00000031325.16	ENSMUST00000127012.9	685	4	-50	-4176	-50	4176	multi-exon	FALSE	canonical	3	19	junction_2	0.816496580927726	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAGTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	102355438	102269457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_102273781_102276407_102276548_102277627_102277876_102355238
tx.21815	chrX	+	7319	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	54	2	54	-2	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTGAACCGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	102400135	102439696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
tx.21816	chrX	-	2536	12	NIC	ENSMUSG00000086370.10	novel	2478	12	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	1.08330684434663	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGATGGTATCTGATT	NA	False	NA	NA	False	NA	NA	NA	102660506	102613173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_102614482_102616105_102616168_102639536_102639614_102646647_102646696_102649063_102649226_102649923_102649989_102650529_102650633_102651142_102651399_102652909_102653023_102656628_102656802_102658670_102658799_102660465
tx.21817	chrX	-	7511	6	NNC	ENSMUSG00000056537.12	novel	7429	5	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	85.0858390097906	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCTTTTTCATCCT	2382	False	NA	NA	False	NA	NA	NA	103024881	103000769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103022109_103022202_103022878_103022941_103024678
tx.21818	chrX	-	7422	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	6	1	6	-1	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCTTTTTCATCCT	2379	False	NA	NA	False	NA	NA	NA	103024884	103000769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
tx.21819	chrX	-	5107	6	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-406	2765	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	11.6275534829989	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGTGTTTTTATAAAAG	NA	False	NA	NA	False	NA	NA	NA	103245197	103124554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103244238_103244478_103245114
tx.2182	chr10	+	2462	11	FSM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	-65	-2	-65	2	multi-exon	FALSE	canonical	3	39	junction_6	12.214745187682	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTTGTGTCTCTGTGGT	289	False	NA	NA	False	NA	NA	NA	127001028	127008201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
tx.21820	chrX	-	5387	6	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	6	2764	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	9.86711710683521	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGTGTTTTTATAAAA	NA	False	NA	NA	False	NA	NA	NA	103244785	103124555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103143231_103143288_103244238
tx.21821	chrX	-	5312	5	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-18	2762	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	10.779030568655	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAATGTGTTTTTATAA	NA	False	NA	NA	False	NA	NA	NA	103244768	103124557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103244238
tx.21822	chrX	-	5931	4	NNC	ENSMUSG00000046449.16	novel	5211	4	NA	NA	-25	2761	intron_retention	FALSE	canonical	1	3	junction_3	12.1928941054479	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAATGTGTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	103244816	103124558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_103124709_103126759_103131837_103132486_103132613_103244238
tx.21823	chrX	-	5672	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	-5	0	-5	0	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	487	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCTGGTGGAAATCA	10047	False	NA	NA	False	NA	NA	NA	103457457	103324262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
tx.21824	chrX	+	7041	7	FSM	ENSMUSG00000073016.4	ENSMUST00000087867.6	2304	7	-14	-4723	-14	4723	multi-exon	FALSE	canonical	2	8	junction_1	1.67497927018682	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACTGACTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	103526409	103555819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103549761
tx.21825	chrX	-	5480	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	76	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	36.4447831962576	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTGTTGTGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	103714594	103580578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_103584775_103588433_103588511_103592686_103592738_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
tx.21826	chrX	-	5487	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	18	4	18	-4	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTGTTGTGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	103714652	103580578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
tx.21827	chrX	-	5302	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	257	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	36.636635428974	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTGTTGTGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	103714413	103580578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_103584775_103588433_103588511_103592686_103592741_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
tx.21828	chrX	-	3467	8	NIC	ENSMUSG00000087174.8	novel	1887	8	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	41.0867673220904	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTAGACTTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	104113716	104080798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_104083419_104086735_104086911_104087607_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113605
tx.21829	chrX	-	779	5	FSM	ENSMUSG00000087174.8	ENSMUST00000138460.8	3732	5	6	2947	6	2	multi-exon	FALSE	canonical	3	29	junction_1	38.5940409908058	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGATTTACATGTAGT	NA	False	NA	NA	False	NA	NA	NA	104113724	104087406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_104087718_104110364_104110484_104112069_104112235_104113216_104113282_104113605
tx.2183	chr10	-	2522	15	FSM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	-47	0	-47	0	multi-exon	FALSE	canonical	3	18	junction_9	9.18628080901302	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6137	False	NA	NA	False	NA	NA	NA	127024688	127018394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
tx.21830	chrX	+	923	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	18	1697	-1	329	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	497	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTGATCTTAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	104123379	104127095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
tx.21831	chrX	-	8002	27	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	53160	0	-648	0	3prime_fragment	FALSE	canonical	3	146	junction_21	31.0765422672784	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	NA	False	NA	NA	NA	104919849	104841220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165
tx.21832	chrX	-	5078	2	FSM	ENSMUSG00000031229.17	ENSMUST00000200471.2	3124	2	-1954	0	-1664	0	multi-exon	FALSE	canonical	3	261	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTGAAGCATTTAAT	NA	False	NA	NA	False	NA	NA	NA	104920865	104909151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_104911530_104918165
tx.21833	chrX	-	6506	10	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	84	combination_of_known_junctions	FALSE	canonical	3	69	junction_9	64.4373559319916	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGTAAGCTAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	104972955	104909067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
tx.21834	chrX	-	4481	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	41	2	41	-2	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACATGGTTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	105055464	105011691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
tx.21835	chrX	-	4028	11	FSM	ENSMUSG00000031232.18	ENSMUST00000033583.14	4115	11	87	0	-26	0	multi-exon	FALSE	canonical	3	21	junction_1	64.6371410258839	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	105055418	105011689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
tx.21836	chrX	+	470	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	39	492	23	0	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	948	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	105059344	105065564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_105059477_105063184_105063310_105065351
tx.21837	chrX	+	310	2	FSM	ENSMUSG00000031231.5	ENSMUST00000155377.2	526	2	216	0	216	0	multi-exon	FALSE	canonical	3	9427	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	105063212	105065564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_105063310_105065351
tx.21838	chrX	+	7909	23	FSM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	-91	-2952	-45	2952	multi-exon	TRUE	canonical	2	29	junction_4	14.4839609212032	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAAGTGTCGCTGTG	NA	False	NA	NA	False	NA	NA	NA	105070836	105171484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
tx.21839	chrX	+	7891	23	FSM	ENSMUSG00000033792.13	ENSMUST00000113557.8	4900	23	-30	-2961	-30	2952	multi-exon	FALSE	canonical	2	41	junction_4	12.997138909572	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAAGTGTCGCTGTG	NA	False	NA	NA	False	NA	NA	NA	105070851	105171484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
tx.2184	chr10	-	1811	6	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	-4	5	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	47.7811678383859	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCGTCTTCTGTTCCTCG	NA	False	NA	NA	False	NA	NA	NA	127031601	127026241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127031562
tx.21840	chrX	+	1783	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	40	2	-23	-2	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	2999	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTCCTGTCATACTT	NA	False	NA	NA	False	NA	NA	NA	105230745	105247303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
tx.21841	chrX	-	2552	8	FSM	ENSMUSG00000047242.15	ENSMUST00000113495.9	2512	8	-31	-9	-31	9	multi-exon	FALSE	canonical	2	3	junction_7	5.73211504221111	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATTTCTTGGCTGAA	NA	False	NA	NA	False	NA	NA	NA	105264795	105250479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_105252264_105253312_105253424_105259732_105259803_105261702_105261838_105261915_105262053_105262501_105262584_105263184_105263305_105264682
tx.21842	chrX	-	2552	7	FSM	ENSMUSG00000047242.15	ENSMUST00000055497.15	2633	7	88	-7	88	7	multi-exon	FALSE	canonical	3	7	junction_1	4.34613493680177	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTCATTTCTTGGCTG	NA	False	NA	NA	False	NA	NA	NA	105263419	105250481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_105252264_105253312_105253424_105259732_105259803_105261702_105261838_105261915_105262053_105262501_105262584_105263184
tx.21843	chrX	-	1649	6	FSM	ENSMUSG00000031239.6	ENSMUST00000033591.6	1744	6	-4	99	-4	-99	multi-exon	FALSE	canonical	3	44	junction_1	8.06473806146238	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTTTATTTTCATCAC	NA	False	NA	NA	False	NA	NA	NA	106446986	106440803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_106441586_106441701_106441853_106442376_106442488_106442701_106442900_106443172_106443305_106446711
tx.21844	chrX	-	4836	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	40	966	40	-966	multi-exon	TRUE	canonical	3	41	junction_6	7.21958786771044	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTAATAAGCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	106859900	106827322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
tx.21845	chrX	-	6027	4	ISM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	83577	1068	83569	-1068	3prime_fragment	FALSE	canonical	3	10	junction_2	7.36357401145817	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCACTCTCGCTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	107794377	107781689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294
tx.21846	chrX	-	11468	41	FSM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	3	148	1	-148	multi-exon	TRUE	canonical	2	5	junction_33	5.32822672190289	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTATTGAAGTATTC	NA	False	NA	NA	False	NA	NA	NA	107877951	107780769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750_107834856_107837907_107837949_107840351_107840453_107841634_107841706_107842360_107842462_107847587_107847810_107849042_107849204_107868411_107868511_107868950_107869102_107876819_107876880_107877282_107877313_107877513_107877573_107877704
tx.21847	chrX	-	1973	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	-42	3	-42	-3	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGGTTTGCAATATT	NA	False	NA	NA	False	NA	NA	NA	108057052	108048142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
tx.21848	chrX	+	2812	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	67	3	67	-3	multi-exon	FALSE	canonical	3	20	junction_1	2.86744175568088	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGATTACTTTTAA	NA	False	NA	NA	False	NA	NA	NA	108139037	108206074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
tx.21849	chrX	-	4283	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	NA	False	NA	NA	NA	110373194	110297889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
tx.2185	chr10	-	1959	6	FSM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	-17	2	1	-2	multi-exon	FALSE	canonical	3	43	junction_1	37.9705148766777	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	127031595	127026248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
tx.21850	chrX	-	4141	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	9	1	9	0	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	NA	False	NA	NA	NA	110372883	110297889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
tx.21851	chrX	-	4265	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-40	-1	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATTTAGTCTTGGTGTA	NA	False	NA	NA	False	NA	NA	NA	110373192	110297890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
tx.21852	chrX	-	4131	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	2	2	2	-2	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCATTTAGTCTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	110372890	110297891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
tx.21853	chrX	+	1310	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	48	1	16	-1	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGCTTTGTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	111221078	111282451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
tx.21854	chrX	+	4248	10	NNC	ENSMUSG00000025529.15	novel	4330	9	NA	NA	206	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	4.24264068711928	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTATAATTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	111510428	111544765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_111510603_111512361_111512480_111513964_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111536866_111537002_111537800_111537846_111541522_111541667_111542075
tx.21855	chrX	-	4866	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	4	-2	-4	2	multi-exon	TRUE	canonical	3	145	junction_7	16.3001189428489	358	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTAATGGCTTATTTT	NA	False	NA	NA	False	NA	NA	NA	112095210	111950287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
tx.21856	chrX	+	873	2	FSM	ENSMUSG00000050435.3	ENSMUST00000059509.3	743	2	-127	-3	-127	3	multi-exon	FALSE	canonical	3	30	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCATTTTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	113814581	113815641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_113814900_113815086
tx.21857	chrX	-	5104	2	Intergenic	novelGene_411	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231725	116226546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_116229122_116229196
tx.21858	chrX	-	3115	2	Intergenic	novelGene_412	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	0	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231725	116226546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_116227411_116229474
tx.21859	chrX	-	5550	2	Intergenic	novelGene_413	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACATGTCTTCAAAATTC	NA	False	NA	NA	False	NA	NA	NA	126455837	126446812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_126452025_126455499
tx.2186	chr10	-	2263	5	FSM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	-5	-264	-4	0	multi-exon	FALSE	canonical	3	65	junction_4	30.8332207205151	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	127031601	127026246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
tx.21860	chrX	+	8402	27	FSM	ENSMUSG00000034480.19	ENSMUST00000167619.9	8439	27	37	0	-17	0	multi-exon	FALSE	non_canonical	0	0	junction_23	27.9511672650587	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCAGTCTCTGATTC	NA	False	NA	NA	False	NA	NA	NA	128650527	129366580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
tx.21861	chrX	+	8421	27	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.7133145770314	24	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTCTCTGATTCCGA	NA	False	NA	NA	False	NA	NA	NA	128650527	129366583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
tx.21862	chrX	-	5097	5	FSM	ENSMUSG00000051323.17	ENSMUST00000060309.10	7035	5	-2772	4710	322	-4709	multi-exon	FALSE	canonical	3	7	junction_2	7.29297607290741	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAAAGCTCTGGACA	NA	False	NA	NA	False	NA	NA	NA	132589414	132488337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_132489327_132526017_132526191_132533643_132533703_132581829_132582158_132585866
tx.21863	chrX	-	6606	5	FSM	ENSMUSG00000051323.17	ENSMUST00000167944.8	8407	5	-1730	3531	-7	-3526	multi-exon	FALSE	canonical	3	12	junction_2	5.78791845139511	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACTAAACAAACAT	NA	False	NA	NA	False	NA	NA	NA	132589743	132487154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132585866
tx.21864	chrX	-	5641	6	NIC	ENSMUSG00000051323.17	novel	10289	6	NA	NA	-84	-4709	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	6.04648658313239	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAAAGCTCTGGACA	NA	False	NA	NA	False	NA	NA	NA	132589820	132488337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132582840_132582982_132585866
tx.21865	chrX	-	1717	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	48	0	48	0	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCGTTTTAATTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	132799130	132791816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
tx.21866	chrX	+	4494	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	11	-3	-7	3	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	845	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	NA	False	NA	NA	NA	132959956	132987571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
tx.21867	chrX	+	2725	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	-8	0	-8	0	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	132959955	132976612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
tx.21868	chrX	+	4416	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	20	-775	-8	2	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	267	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTACTTAGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	132959955	132987570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
tx.21869	chrX	+	4561	15	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	232.87177868115	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTACTTAGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	132959948	132987570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973163_132973224_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
tx.2187	chr10	-	3347	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	-41	1	-11	-1	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	828	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGAAGTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	127047465	127032936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
tx.21870	chrX	-	3088	13	FSM	ENSMUSG00000067369.13	ENSMUST00000087541.12	3119	13	31	0	-24	0	multi-exon	TRUE	canonical	1	13	junction_4	11.7686022959398	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTATCTCTAGTCCATG	NA	False	NA	NA	False	NA	NA	NA	133177700	133123843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
tx.21871	chrX	-	3166	14	FSM	ENSMUSG00000067369.13	ENSMUST00000113252.8	3128	14	-34	-4	-27	0	multi-exon	FALSE	canonical	1	5	junction_12	15.8476474277441	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTATCTCTAGTCCAT	NA	False	NA	NA	False	NA	NA	NA	133177703	133123844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133171258_133171335_133177594
tx.21872	chrX	-	1786	4	NIC	ENSMUSG00000067369.13	novel	4099	12	NA	NA	16	5	intron_retention	FALSE	canonical	3	48	junction_1	4.32049379893857	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCCGCATTGTCAT	NA	False	NA	NA	False	NA	NA	NA	133177715	133163231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_133164611_133167009_133167065_133168079_133168311_133177594
tx.21873	chrX	+	3167	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	62	-2	-9	2	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCGAATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	133208894	133263390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
tx.21874	chrX	+	3098	22	FSM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	-9	-4	-9	1	multi-exon	FALSE	canonical	3	75	junction_1	51.4515821537341	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTCCGAATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	133208894	133263389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
tx.21875	chrX	+	3238	22	NIC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	8	0	intron_retention	FALSE	canonical	3	156	junction_8	43.2155384837434	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	133208911	133263385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_133208978_133209314_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
tx.21876	chrX	+	3597	21	NIC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	-10	1	intron_retention	FALSE	canonical	3	156	junction_7	44.2429655425583	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTCCGAATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	133208893	133263389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
tx.21877	chrX	-	1977	13	FSM	ENSMUSG00000009596.10	ENSMUST00000009740.9	1933	13	-38	-6	-38	6	multi-exon	FALSE	canonical	3	9	junction_2	4.16999866773227	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTCTAATTTCTAACAAG	NA	False	NA	NA	False	NA	NA	NA	133377277	133360860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371128_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
tx.21878	chrX	-	1229	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	196	-4	196	4	multi-exon	FALSE	canonical	3	1175	junction_1	0	165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACGAAGAGGCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	133442418	133438000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_133439017_133442205
tx.21879	chrX	+	463	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	20	0	-15	0	multi-exon	FALSE	canonical	3	10431	junction_4	1336.12412877696	985	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	133486422	133488805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
tx.2188	chr10	-	5568	29	NNC	ENSMUSG00000074657.6	novel	6295	29	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	8.8746227283997	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTGTTGCTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	127098982	127061565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_127063800_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
tx.21880	chrX	+	843	2	FSM	ENSMUSG00000079435.10	ENSMUST00000152266.2	553	2	-231	-59	-231	-1	multi-exon	FALSE	canonical	3	10431	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAAGTTTTTCTCCTGT	NA	False	NA	NA	False	NA	NA	NA	133487598	133488804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_133488323_133488685
tx.21881	chrX	-	3005	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	10	0	10	0	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAATTTCAAATA	NA	False	NA	NA	False	NA	NA	NA	133501744	133488934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
tx.21882	chrX	+	2371	3	FSM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	61	-6	15	0	multi-exon	FALSE	canonical	3	597	junction_2	148.5	855	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	NA	NA	NA	133501988	133507809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_133502083_133503440_133503512_133505603
tx.21883	chrX	+	2416	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	-46	-6	15	0	multi-exon	FALSE	canonical	3	164	junction_3	339.283886377699	232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	NA	NA	NA	133501988	133507809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
tx.21884	chrX	+	8089	6	FSM	ENSMUSG00000049804.10	ENSMUST00000124226.3	7996	6	-97	4	-97	-4	multi-exon	FALSE	canonical	2	4	junction_2	2.44948974278318	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGAGATATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	133587170	133597502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_133587387_133587896_133587975_133588765_133588856_133589198_133589282_133589568_133589654_133589965
tx.21885	chrX	+	2130	4	NNC	ENSMUSG00000033460.15	novel	2179	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_3	34.8839345385363	47	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	133618684	133622666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_133618800_133619668_133619742_133620375_133620475_133620823
tx.21886	chrX	+	2166	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	-72	-9	-22	0	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	133618689	133622666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
tx.21887	chrX	+	3369	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	-11	-31	-11	1	multi-exon	FALSE	canonical	2	7	junction_1	4.81534007106456	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGTGTAGAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	133657332	133662205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
tx.21888	chrX	-	3479	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	189	-2	-36	0	multi-exon	FALSE	canonical	3	17	junction_5	6.60302960768767	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	133709781	133704893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
tx.21889	chrX	-	2375	22	FSM	ENSMUSG00000009941.11	ENSMUST00000113189.8	2375	22	2	-2	2	0	multi-exon	TRUE	canonical	3	15	junction_3	7.21770310384392	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTGAAGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	133865501	133845274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_133845538_133845640_133845702_133850435_133850616_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
tx.2189	chr10	-	3507	29	NNC	ENSMUSG00000074657.6	novel	6295	29	NA	NA	-32	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	9.36307064144743	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTTGCTTCTTATT	NA	False	NA	NA	False	NA	NA	NA	127098996	127061564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_127061724_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
tx.21890	chrX	-	2380	22	FSM	ENSMUSG00000009941.11	ENSMUST00000010085.4	2393	22	12	1	12	-1	multi-exon	FALSE	canonical	3	19	junction_3	6.66632652193486	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTATGTCTTGAAGTGC	NA	False	NA	NA	False	NA	NA	NA	133865491	133845277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_133845538_133845640_133845702_133850435_133850634_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
tx.21891	chrX	-	3514	7	FSM	ENSMUSG00000052676.17	ENSMUST00000064659.6	3501	7	-10	-3	-10	0	multi-exon	FALSE	canonical	0	0	junction_4	2.08166599946613	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTTGTGATCTTTTC	NA	False	NA	NA	False	NA	NA	NA	133909968	133872120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_133874776_133878396_133878497_133891312_133891379_133892883_133893059_133893145_133893248_133894287_133894395_133909659
tx.21892	chrX	-	3769	8	NIC	ENSMUSG00000085556.2	novel	636	6	NA	NA	4	4775	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	7.74069553379661	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCCGTTTCTTTGA	1138	False	NA	NA	False	NA	NA	NA	134053341	134018851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_134021224_134022418_134023001_134023443_134023744_134044969_134045069_134048327_134048426_134050176_134050266_134051692_134051783_134053202
tx.21893	chrX	-	3673	7	NIC	ENSMUSG00000085556.2	novel	636	6	NA	NA	1	4774	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	7.80313327381308	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTATCCGTTTCTTTG	1135	False	NA	NA	False	NA	NA	NA	134053344	134018852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_134021224_134022418_134023001_134023443_134023744_134044969_134045069_134050176_134050266_134051692_134051783_134053202
tx.21894	chrX	-	3832	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	27	-161	27	161	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134078354	134068211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
tx.21895	chrX	-	3889	6	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	26	161	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	99.3390154974369	31	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134078355	134068211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134074196_134074253_134077932_134078052_134078249
tx.21896	chrX	+	3831	5	FSM	ENSMUSG00000067360.13	ENSMUST00000118821.8	3698	5	27	-160	18	160	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTTCTTCGTGAA	NA	False	NA	NA	False	NA	NA	NA	134203082	134213561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
tx.21897	chrX	+	3656	7	NIC	ENSMUSG00000087428.2	novel	632	6	NA	NA	4	4739	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	13.228756555323	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCTGTTTCTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	134230513	134254615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_134230653_134232087_134232178_134233599_134233689_134238796_134238896_134249759_134250060_134250503_134251086_134252258
tx.21898	chrX	+	3821	5	FSM	ENSMUSG00000094004.8	ENSMUST00000180198.2	3836	5	21	-6	21	6	multi-exon	FALSE	canonical	3	42	junction_2	73.5272058492637	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTTCTTCGTGAA	NA	False	NA	NA	False	NA	NA	NA	134274053	134284148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_134274160_134274357_134274477_134278675_134278976_134280276_134280862_134281437
tx.21899	chrX	+	3829	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	22	-174	22	174	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134334605	134344753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
tx.219	chr1	+	4577	31	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	26.1908380927377	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	39940049	40064128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
tx.2190	chr10	-	6085	29	FSM	ENSMUSG00000074657.6	ENSMUST00000099172.5	6295	29	210	0	-43	0	multi-exon	FALSE	canonical	3	9	junction_1	8.75808664222118	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTTGCTTCTTATT	NA	False	NA	NA	False	NA	NA	NA	127099007	127061564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
tx.21900	chrX	+	3829	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	22	-174	22	174	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134334605	134344753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
tx.21901	chrX	+	3832	5	FSM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	27	-161	27	161	multi-exon	FALSE	canonical	3	112	junction_2	53.6516542149448	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134395363	134405504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_134395469_134395666_134395786_134400016_134400317_134401619_134402205_134402781
tx.21902	chrX	+	6257	2	NIC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	3334	161	intron_retention	FALSE	canonical	3	245	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134398670	134405504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_134402205_134402781
tx.21903	chrX	+	5220	5	NIC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-43	4392	combination_of_known_junctions	TRUE	canonical	3	29	junction_1	13.3299474867683	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTGAGTGCCCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	134643438	134667131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134662477
tx.21904	chrX	+	2805	4	FSM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	-24	-2	-24	2	multi-exon	FALSE	canonical	3	91	junction_3	8.05536398239638	91	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGTTCCAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	134643457	134648073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134645667
tx.21905	chrX	+	5292	6	NIC	ENSMUSG00000043384.16	novel	5640	10	NA	NA	-40	4386	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	15.9549365401433	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGATTGAGTGCCC	NA	False	NA	NA	False	NA	NA	NA	134643441	134667125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134649404_134649532_134652693_134652767_134662477
tx.21906	chrX	+	5314	7	ISM	ENSMUSG00000043384.16	ENSMUST00000113144.8	5843	11	53408	7	-1447	1	3prime_fragment	FALSE	canonical	0	0	junction_1	59.1326193117358	88	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9791	False	NA	NA	False	NA	NA	NA	134696889	134704216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
tx.21907	chrX	+	5224	6	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1446	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	60.7302231183124	58	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9792	False	NA	NA	False	NA	NA	NA	134696890	134704216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_134697086_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
tx.21908	chrX	+	5352	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1448	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	59.1326193117358	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9790	False	NA	NA	False	NA	NA	NA	134696888	134704215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_134697086_134697659_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
tx.21909	chrX	+	3775	7	FSM	ENSMUSG00000072966.12	ENSMUST00000173804.8	3814	7	34	5	12	-1	multi-exon	FALSE	canonical	0	0	junction_1	54.6669207311169	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	134739816	134745474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_134740012_134740493_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
tx.2191	chr10	-	4056	28	FSM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	-59	-1	-44	1	multi-exon	FALSE	canonical	3	28	junction_13	6.98675996544999	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTGTCCATCGGTCTA	NA	False	NA	NA	False	NA	NA	NA	127099008	127064917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
tx.21910	chrX	+	3748	7	NIC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	3	1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	54.6669207311169	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGACCCTTCTTCACTT	NA	False	NA	NA	False	NA	NA	NA	134739807	134745476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
tx.21911	chrX	+	2775	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	38	-1	36	1	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	277	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGTTTGTGTATAT	NA	False	NA	NA	False	NA	NA	NA	134786637	134791828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
tx.21912	chrX	+	2757	5	FSM	ENSMUSG00000072964.15	ENSMUST00000068755.14	2823	5	64	2	64	1	multi-exon	FALSE	canonical	3	24	junction_1	79.1296404642407	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGTTTGTGTATAT	NA	False	NA	NA	False	NA	NA	NA	134786665	134791828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_134786847_134787593_134787676_134788009_134788067_134789120_134789229_134789499
tx.21913	chrX	-	823	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	78	2	78	-2	multi-exon	FALSE	canonical	3	901	junction_2	34	265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTAGTTCTTTAAA	4234	False	NA	NA	False	NA	NA	NA	134968907	134967314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_134967957_134968348_134968422_134968799
tx.21914	chrX	-	3065	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_19	15.6232999075099	29	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	NA	NA	NA	134985983	134972851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
tx.21915	chrX	+	789	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	48	0	48	0	multi-exon	FALSE	canonical	3	2369	junction_2	964	399	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCAGTCATCTTCT	NA	False	NA	NA	False	NA	NA	NA	135039792	135041192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_135039916_135040271_135040349_135040603
tx.21916	chrX	-	1138	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	111	1	-15	-1	multi-exon	FALSE	canonical	3	703	junction_2	29	287	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTGGTTAAGACTTGGT	NA	False	NA	NA	False	NA	NA	NA	135072980	135070830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_135071799_135072384_135072455_135072880
tx.21917	chrX	-	811	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	55	0	-15	0	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	1119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	NA	False	NA	NA	NA	135116207	135114720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_135115333_135115652_135115730_135116085
tx.21918	chrX	+	1003	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	10	6	10	-6	multi-exon	FALSE	canonical	3	2732	junction_2	36	889	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCCAACAGCCCATC	NA	False	NA	NA	False	NA	NA	NA	135145837	135147882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_135145977_135146449_135146516_135147084
tx.21919	chrX	+	839	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	33	58	-11	0	multi-exon	FALSE	canonical	3	4289	junction_2	392	1210	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTGTCCTTAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	135171042	135172669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_135171151_135171558_135171632_135172011
tx.2192	chr10	+	1810	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-25	-1	-6	1	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	717	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGAGTTTCAAAATAT	9191	False	NA	NA	False	NA	NA	NA	127102230	127117820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
tx.21920	chrX	+	1196	2	FSM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	0	1607	0	-1607	multi-exon	FALSE	canonical	3	18	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAATGTTTCTTCTGAA	NA	False	NA	NA	False	NA	NA	NA	135608730	135610620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_135608838_135609531
tx.21921	chrX	-	1801	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	69	-11	-7	0	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	3006	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	135642032	135633690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
tx.21922	chrX	-	430	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	19	1	19	-1	multi-exon	FALSE	canonical	3	182	junction_2	19	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGTGTAACTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	135858755	135856014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_135856232_135857483_135857589_135858647
tx.21923	chrX	-	444	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	4	2	4	-2	multi-exon	FALSE	canonical	3	182	junction_2	19	9	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTGTGTAACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	135858770	135856015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_135856232_135857483_135857589_135858647
tx.21924	chrX	-	439	3	FSM	ENSMUSG00000089768.3	ENSMUST00000113071.2	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	50	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	135877623	135874770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_135874989_135876146_135876252_135877507
tx.21925	chrX	+	2270	4	FSM	ENSMUSG00000031428.12	ENSMUST00000101227.3	2045	4	37	-262	37	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGCAGGGGTGTTCTATT	7942	False	NA	NA	False	NA	NA	NA	135893944	135897127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_135894154_135894455_135894511_135894679_135894820_135895261
tx.21926	chrX	-	3494	7	FSM	ENSMUSG00000044348.15	ENSMUST00000123516.8	1740	7	-28	-1726	0	-2	multi-exon	FALSE	canonical	3	14	junction_5	9.36304793679209	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAATGTGAGAGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	135939049	135901805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099_135933250_135938914
tx.21927	chrX	+	8296	6	FSM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	-1	4	-1	-4	multi-exon	FALSE	canonical	3	22	junction_5	9.32523458149981	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGCATGTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	135950341	135983248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
tx.21928	chrX	+	7048	2	ISM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	24538	0	24538	0	3prime_fragment	FALSE	canonical	3	22	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCATGTGTGTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	135974880	135983252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_135974905_135976228
tx.21929	chrX	-	1374	4	FSM	ENSMUSG00000023443.14	ENSMUST00000113066.9	1692	4	318	0	318	0	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTTTGAGAGTTATA	NA	False	NA	NA	False	NA	NA	NA	136020602	136016145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319
tx.2193	chr10	+	5471	12	ISM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	4425	-2	4425	2	3prime_fragment	FALSE	canonical	3	604	junction_6	36.5072165400778	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGTTTCAAAATATT	NA	False	NA	NA	False	NA	NA	NA	127106680	127117821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
tx.21930	chrX	+	4342	5	FSM	ENSMUSG00000042515.14	ENSMUST00000113041.9	4343	5	-2	3	-2	-1	multi-exon	FALSE	canonical	0	0	junction_1	3.76662979332984	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATTTTGTATTATTTTA	NA	False	NA	NA	False	NA	NA	NA	138117912	138139081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_138117964_138118896_138119058_138132034_138132164_138134427_138134595_138135247
tx.21931	chrX	+	4171	4	FSM	ENSMUSG00000042515.14	ENSMUST00000113042.3	4182	4	9	2	9	0	multi-exon	FALSE	canonical	1	1	junction_1	3.29983164553722	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTGTATTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	138117923	138139082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_138117964_138132034_138132164_138134427_138134595_138135247
tx.21932	chrX	+	1013	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	164	1	164	-1	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	903	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGTTTCACGTTAACG	NA	False	NA	NA	False	NA	NA	NA	138234595	138238917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_138235157_138237570_138237800_138238694
tx.21933	chrX	-	3413	2	Intergenic	novelGene_414	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATACTTGGCTTCTCCTA	NA	False	NA	NA	False	NA	NA	NA	138300894	138294745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_138297544_138300279
tx.21934	chrX	-	1088	3	Intergenic	novelGene_415	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	13	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCTAGAGTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	138300917	138296085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_138296298_138297305_138297544_138300279
tx.21935	chrX	+	2753	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	-10	7	-10	0	multi-exon	FALSE	canonical	3	69	junction_2	9.49853789918334	158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATCTGGTGTTCGAT	NA	False	NA	NA	False	NA	NA	NA	138511358	138573887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
tx.21936	chrX	-	1995	9	FSM	ENSMUSG00000072944.12	ENSMUST00000101212.9	1996	9	1	0	1	0	multi-exon	FALSE	canonical	3	147	junction_8	135.330151850946	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	138963316	138907553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963161
tx.21937	chrX	-	1880	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	344	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGAACTGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	138963346	138907552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
tx.21938	chrX	+	1953	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	12	0	12	0	multi-exon	FALSE	canonical	3	1771	junction_6	191.019850626403	1790	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	NA	False	NA	NA	NA	139357373	139376889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
tx.21939	chrX	-	1811	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	51	junction_2	112.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	NA	NA	NA	139443438	139440276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_139441857_139442853_139442906_139443259
tx.2194	chr10	-	4260	13	FSM	ENSMUSG00000025409.15	ENSMUST00000119078.8	4287	13	27	0	27	0	multi-exon	FALSE	canonical	3	53	junction_4	21.7579806558932	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	NA	False	NA	NA	NA	127124860	127117824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
tx.21940	chrX	-	1972	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	2	0	2	0	multi-exon	FALSE	canonical	3	154	junction_2	61	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	NA	NA	NA	139443934	139440276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_139441857_139442853_139442906_139443594
tx.21941	chrX	-	2276	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1530	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_3	116.499880782009	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	NA	NA	NA	139499878	139440276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139499665
tx.21942	chrX	-	2385	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1460	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	117.748319167055	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	NA	NA	NA	139499948	139440276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139499626
tx.21943	chrX	-	2143	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1180	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	110.816164083685	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	NA	NA	NA	139500228	139440276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500148
tx.21944	chrX	-	1453	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	-21	-2	18	2	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCAATTTCTCATTCAA	NA	False	NA	NA	False	NA	NA	NA	139857459	139849175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
tx.21945	chrX	-	1372	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	18	0	18	0	multi-exon	FALSE	canonical	3	80	junction_1	228.562218006389	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCCCAATTTCTCATTC	NA	False	NA	NA	False	NA	NA	NA	139857459	139849177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
tx.21946	chrX	+	2116	13	FSM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	10	76	10	-1	multi-exon	FALSE	canonical	2	18	junction_1	12.4707992259251	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTGGTTGAGAACTAT	NA	False	NA	NA	False	NA	NA	NA	139857665	139947190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
tx.21947	chrX	+	2533	5	FSM	ENSMUSG00000042271.14	ENSMUST00000112916.9	2532	5	-1	0	-1	0	multi-exon	FALSE	canonical	3	188	junction_1	39.4865483424419	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	141009764	141022688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_141009928_141011286_141011378_141012519_141012607_141019779_141019925_141020641
tx.21948	chrX	+	2456	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	28	0	-22	0	multi-exon	FALSE	canonical	3	263	junction_3	9.93310961716756	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	141011200	141022688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
tx.21949	chrX	-	4959	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112903.8	4956	16	-3	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_14	45.3617557959223	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	141173503	141100988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134612_141143382_141143433_141173300
tx.2195	chr10	-	4291	13	NIC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	41	junction_4	23.7748408103094	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	NA	False	NA	NA	NA	127124888	127117824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
tx.21950	chrX	-	5254	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	26	0	-5	0	multi-exon	FALSE	canonical	3	129	junction_14	18.9168942717585	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	141173505	141100988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
tx.21951	chrX	-	4965	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	-6	0	-6	0	multi-exon	FALSE	canonical	3	35	junction_14	37.5140862432589	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	141173506	141100988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
tx.21952	chrX	-	3975	10	ISM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	46954	0	-15365	0	3prime_fragment	TRUE	canonical	3	142	junction_4	18.5172592164415	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	141126386	141100988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302
tx.21953	chrX	+	5292	7	FSM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	-11	-132	1	132	multi-exon	FALSE	canonical	3	33	junction_2	37.6592913133296	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGAGTCCTGGCCTTG	NA	False	NA	NA	False	NA	NA	NA	141464402	141621366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_141464553_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
tx.21954	chrX	+	4633	6	ISM	ENSMUSG00000047045.18	ENSMUST00000112889.8	1742	7	2	5123	2	133	5prime_fragment	FALSE	canonical	3	60	junction_1	22.0599184042009	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGAGTCCTGGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	141464403	141621367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
tx.21955	chrX	+	5216	7	FSM	ENSMUSG00000047045.18	ENSMUST00000112896.9	5224	7	139	-131	139	131	multi-exon	FALSE	canonical	2	8	junction_1	44.5474154381848	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGGAGTCCTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	141464860	141621365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_141464936_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
tx.21956	chrX	-	5433	6	FSM	ENSMUSG00000042225.4	ENSMUST00000041317.3	5437	6	-1	5	-1	-5	multi-exon	FALSE	canonical	3	79	junction_1	6.04648658313239	153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATCTTTGTTTTAGATT	NA	False	NA	NA	False	NA	NA	NA	141749725	141634146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
tx.21957	chrX	-	3529	13	FSM	ENSMUSG00000067276.6	ENSMUST00000087316.6	3561	13	28	4	28	-4	multi-exon	FALSE	canonical	3	10	junction_3	5.06348584365444	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGTCTTGACTAGTTA	NA	False	NA	NA	False	NA	NA	NA	142610382	142585230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_142586823_142587352_142587490_142587670_142587793_142588390_142588594_142588758_142588882_142590241_142590429_142590522_142590601_142590836_142591031_142591613_142591807_142592290_142592500_142593840_142593973_142603291_142603473_142610204
tx.21958	chrX	-	2790	2	Antisense	novelGene_ENSMUSG00000041718.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTACTCTGTGTATGTC	NA	False	NA	NA	False	NA	NA	NA	143100952	143097441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chrX_-_143099864_143100584
tx.21959	chrX	+	4077	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	189.502244292029	686	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	143101005	143157446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
tx.2196	chr10	-	4266	13	FSM	ENSMUSG00000025409.15	ENSMUST00000026476.13	4165	13	-101	0	27	0	multi-exon	FALSE	canonical	3	40	junction_5	25.9994658064781	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	NA	False	NA	NA	NA	127124860	127117824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
tx.21960	chrX	+	3928	24	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17927	1	81	-1	3prime_fragment	FALSE	canonical	3	957	junction_21	118.352985224418	446	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGAGTTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	143118945	143157445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
tx.21961	chrX	+	2064	7	FSM	ENSMUSG00000095872.8	ENSMUST00000178833.2	1350	7	-113	-601	-113	0	multi-exon	TRUE	canonical	0	0	junction_3	6.15539510420646	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGTTTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	146572610	146616452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_146572740_146589721_146589848_146590566_146590647_146594315_146595275_146608125_146608208_146609013_146609064_146615814
tx.21962	chrX	+	1995	8	NNC	ENSMUSG00000096834.8	novel	2026	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.91146098219174	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	147446576	147486845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_147446686_147463739_147463866_147464585_147464666_147468313_147469041_147469088_147469273_147478430_147478513_147479317_147479368_147486208
tx.21963	chrX	+	2040	7	FSM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	-16	1	-16	-1	multi-exon	FALSE	canonical	1	5	junction_3	4.85626742811116	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	147665555	147707134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_147665664_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
tx.21964	chrX	+	2044	7	FSM	ENSMUSG00000095621.2	ENSMUST00000178169.2	2028	7	-16	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_1	6.67707520800338	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	148230596	148270780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_148230705_148247706_148247833_148248551_148248632_148252302_148253262_148262449_148262532_148263337_148263388_148270141
tx.21965	chrX	+	2043	7	FSM	ENSMUSG00000095621.2	ENSMUST00000178169.2	2028	7	-16	1	-16	-1	multi-exon	TRUE	canonical	0	0	junction_1	6.67707520800338	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	148230596	148270779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_148230705_148247706_148247833_148248551_148248632_148252302_148253262_148262449_148262532_148263337_148263388_148270141
tx.21966	chrX	+	1993	7	FSM	ENSMUSG00000072923.7	ENSMUST00000101181.5	1977	7	-17	1	-17	-1	multi-exon	FALSE	canonical	0	0	junction_1	5.06622805119022	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	148377548	148419759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
tx.21967	chrX	+	2045	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	-17	1	-17	-1	multi-exon	TRUE	canonical	1	1	junction_6	4.6785562825394	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	148567451	148609689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
tx.21968	chrX	+	2043	7	FSM	ENSMUSG00000095082.2	ENSMUST00000112740.2	2026	7	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_3	4.07226390762354	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	148724633	148767978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_148724743_148744867_148744994_148745713_148745794_148749452_148750412_148759566_148759649_148760454_148760505_148767341
tx.21969	chrX	+	3738	3	Intergenic	novelGene_416	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_2	7.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGGGTTGTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	148930426	148938185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_148930725_148930848_148930931_148934827
tx.2197	chr10	-	2944	8	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	-111	-2	intron_retention	FALSE	canonical	3	40	junction_5	30.3617643540997	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTGACTCTGTACTCA	NA	False	NA	NA	False	NA	NA	NA	127121880	127117826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400
tx.21970	chrX	+	4939	2	Intergenic	novelGene_417	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTTTTAGTCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	148930493	148935556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_148930725_148930848
tx.21971	chrX	-	1309	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	3	4	-1	2	multi-exon	FALSE	canonical	3	95	junction_2	83.5	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATATCTGACTTGAGAGG	NA	False	NA	NA	False	NA	NA	NA	149242147	149191577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_149192597_149203337_149203438_149241957
tx.21972	chrX	-	1201	3	FSM	ENSMUSG00000041353.13	ENSMUST00000151067.8	864	3	4	-341	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	131	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGACTTGAGAGGTAT	NA	False	NA	NA	False	NA	NA	NA	149242146	149191574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_149192597_149203337_149203438_149242067
tx.21973	chrX	-	3310	6	ISM	ENSMUSG00000025269.17	ENSMUST00000112725.8	3613	7	1704	82	9	-82	3prime_fragment	FALSE	canonical	3	13	junction_1	30.3539124331609	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACTTTCTATAATTTCT	NA	False	NA	NA	False	NA	NA	NA	149371136	149302596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_149305207_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
tx.21974	chrX	-	1895	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	-10	-1	-10	0	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGTTGAGTGGATATT	NA	False	NA	NA	False	NA	NA	NA	149371155	149354502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
tx.21975	chrX	+	1919	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	10.2058806577385	42	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCTTTCATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	149371225	149426873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_149371339_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
tx.21976	chrX	+	2077	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	17.6227126175286	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	NA	False	NA	NA	NA	149371225	149426874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_149371339_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
tx.21977	chrX	-	3658	2	ISM	ENSMUSG00000025272.17	ENSMUST00000087253.11	3224	14	8264	-2	2536	-2	3prime_fragment	FALSE	canonical	3	31	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTATTCTGTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	149432131	149428301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_149428518_149428689
tx.21978	chrX	-	2237	12	ISM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	748	0	-1	0	3prime_fragment	FALSE	canonical	3	154	junction_9	18.0545546095372	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	149595955	149589416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
tx.21979	chrX	-	2174	13	NIC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	35	junction_12	45.1259810604342	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	149595975	149589416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149595816
tx.2198	chr10	-	4269	13	NIC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	21	0	intron_retention	FALSE	canonical	3	40	junction_5	24.2206294073645	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	NA	False	NA	NA	NA	127124866	127117824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
tx.21980	chrX	-	2095	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	12	0	12	0	multi-exon	FALSE	canonical	3	63	junction_12	38.0929965858409	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	149596691	149589416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
tx.21981	chrX	-	2081	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112699.9	2183	13	51	51	-13	0	multi-exon	FALSE	canonical	3	26	junction_12	47.4332864839309	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	149597290	149589416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149597224
tx.21982	chrX	-	4826	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	43	0	43	0	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	481	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	149800275	149766136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
tx.21983	chrX	+	4354	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-297	164	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	100.965649028454	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAAGCCTCATC	NA	False	NA	NA	False	NA	NA	NA	149829868	149872681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852745_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
tx.21984	chrX	+	3369	18	NNC	ENSMUSG00000025265.15	novel	594	3	NA	NA	-277	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.75447075357	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAGCACTGCTATGG	NA	False	NA	NA	False	NA	NA	NA	149829888	149872517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_149830069_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
tx.21985	chrX	+	4431	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-268	-162	-268	162	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	850	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGGTCTTAAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	149829897	149872679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
tx.21986	chrX	+	2971	15	ISM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	19870	-161	-343	161	3prime_fragment	FALSE	canonical	3	362	junction_3	32.3366380946645	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAAGGTCTTAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	149850035	149872678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
tx.21987	chrX	-	1390	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	19	2387	-1	0	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	243	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	NA	False	NA	NA	NA	149879520	149872476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
tx.21988	chrX	-	1299	4	FSM	ENSMUSG00000025264.13	ENSMUST00000166010.2	1318	4	19	0	-1	0	multi-exon	FALSE	canonical	3	44	junction_3	140.42158745087	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	NA	False	NA	NA	NA	149879520	149872476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879424
tx.21989	chrX	+	190	2	Antisense	novelGene_ENSMUSG00000025264.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGCCTTGGTTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	149875436	149910426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chrX_+_149875487_149910286
tx.2199	chr10	+	831	3	FSM	ENSMUSG00000025408.16	ENSMUST00000139091.2	600	3	-12	-219	7	-4	multi-exon	FALSE	canonical	0	0	junction_1	357	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCTCTCACTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	127126649	127132153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127126761_127131189_127131348_127131591
tx.21990	chrX	+	10490	23	Fusion	ENSMUSG00000086286.2_ENSMUSG00000041245.14	novel	5253	22	NA	NA	-185	17	multi-exon	TRUE	canonical	3	19	junction_6	4.9057227502662	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTCTGTCATATTTAC	NA	False	NA	NA	False	NA	NA	NA	149952510	150103165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
tx.21991	chrX	+	7747	16	FSM	ENSMUSG00000025262.9	ENSMUST00000073364.6	5463	16	6	-2290	6	2290	multi-exon	FALSE	canonical	2	7	junction_7	3.8262252939418	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATTTTGAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	150127176	150257128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150211912_150212013_150212832_150212910_150213386_150213665_150214465_150214740_150215597_150215770_150219140_150219391_150240717_150240833_150246964_150247175_150248278_150248481_150250295_150250435_150250794_150250853_150252471
tx.21992	chrX	+	6012	22	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.0701828384257	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	NA	False	NA	NA	NA	150303667	150416855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_150304085_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
tx.21993	chrX	+	5711	21	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	23.7762486528048	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	NA	False	NA	NA	NA	150303665	150416855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_150304085_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
tx.21994	chrX	+	5446	21	NIC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_12	14.924727803213	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	NA	False	NA	NA	NA	150304159	150416853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
tx.21995	chrX	+	5740	22	FSM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	-14	2	4	0	multi-exon	FALSE	canonical	3	62	junction_12	12.6336842339938	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	NA	False	NA	NA	NA	150304168	150416853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
tx.21996	chrX	+	5855	22	FSM	ENSMUSG00000041229.16	ENSMUST00000168501.8	6359	22	504	0	-5	0	multi-exon	FALSE	canonical	2	12	junction_1	20.027645292538	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	NA	False	NA	NA	NA	150304171	150416853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_150304434_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
tx.21997	chrX	+	4539	20	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	81878	526	-4156	-526	3prime_fragment	FALSE	canonical	3	344	junction_9	98.2875818883678	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCACAACGGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	150700121	150717887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
tx.21998	chrX	+	3544	17	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	84389	528	-1645	-528	3prime_fragment	FALSE	canonical	3	344	junction_6	88.4742194088199	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAACGGAGTT	NA	False	NA	NA	False	NA	NA	NA	150702632	150717885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
tx.21999	chrX	+	916	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	44	2	44	-2	multi-exon	FALSE	canonical	3	1359	junction_1	187.651165730459	494	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTGTGCAGTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	150784884	150787436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
tx.22	chr1	+	1851	13	FSM	ENSMUSG00000025911.15	ENSMUST00000027044.15	2022	13	8	163	8	-163	multi-exon	FALSE	canonical	0	0	junction_3	21.4416197045735	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	NA	NA	NA	9618287	9646963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
tx.220	chr1	+	4606	31	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-145	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	26.6174754625603	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	39939927	40064128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
tx.2200	chr10	+	5244	2	NIC	ENSMUSG00000025408.16	novel	600	3	NA	NA	5	-2	intron_retention	FALSE	canonical	3	714	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCTCACTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	127126667	127132155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_127131348_127131591
tx.22000	chrX	-	1475	8	NNC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	35.9222516452589	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTGTCGTAAGAGTACA	NA	False	NA	NA	False	NA	NA	NA	150799253	150787575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798868_150799158
tx.22001	chrX	-	1504	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	6	-2	6	2	multi-exon	FALSE	canonical	3	80	junction_7	14.6816559150582	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTGTCGTAAGAGTACA	NA	False	NA	NA	False	NA	NA	NA	150799285	150787575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
tx.22002	chrX	+	3940	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	27	724	27	-724	multi-exon	TRUE	canonical	3	535	junction_3	101.202320735358	1100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	NA	False	NA	NA	NA	150799450	150844966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
tx.22003	chrX	+	3619	23	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	46	-724	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	147.492463737996	272	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	NA	False	NA	NA	NA	150799469	150844966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
tx.22004	chrX	+	5805	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	3	641	3	122	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	862	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGAAGTGCATTT	NA	False	NA	NA	False	NA	NA	NA	151016227	151056890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
tx.22005	chrX	+	6289	25	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	3	-19	intron_retention	FALSE	canonical	3	39	junction_21	110.865502850175	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGATACAATATGCGC	NA	False	NA	NA	False	NA	NA	NA	151016227	151057512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
tx.22006	chrX	+	2812	8	ISM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	35530	-117	-1004	117	3prime_fragment	FALSE	canonical	3	451	junction_6	58.8744773363862	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACATGTTTCTGAAGTG	4452	False	NA	NA	False	NA	NA	NA	151051797	151056885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
tx.22007	chrX	+	2529	4	ISM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	37925	8	-759	-8	3prime_fragment	FALSE	canonical	3	451	junction_2	81.0774663858927	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCGCTCCTTTTGTGT	6804	False	NA	NA	False	NA	NA	NA	151054149	151057523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_151054590_151054855_151054926_151055070_151055271_151055704
tx.22008	chrX	-	4218	3	FSM	ENSMUSG00000087403.10	ENSMUST00000195280.3	4212	3	-4	-2	-4	2	multi-exon	FALSE	canonical	3	16	junction_2	19	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTGTGACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	151110495	151077821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_151081871_151110156_151110236_151110405
tx.22009	chrX	-	4247	3	FSM	ENSMUSG00000087403.10	ENSMUST00000148326.8	584	3	11	-3674	11	2	multi-exon	FALSE	canonical	3	54	junction_1	13.5	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTGTGACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	151110480	151077821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_151081871_151110156_151110236_151110361
tx.2201	chr10	-	2831	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	103	5	-5	0	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	3318	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	127147552	127132094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
tx.22010	chrX	-	4305	4	FSM	ENSMUSG00000087403.10	ENSMUST00000181635.8	398	4	-5	-3902	2	1	multi-exon	FALSE	canonical	3	22	junction_1	27.8128667266709	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGTGTGACTTCCT	NA	False	NA	NA	False	NA	NA	NA	151110464	151077822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_151081871_151103205_151103281_151110156_151110236_151110361
tx.22011	chrX	-	4051	4	ISM	ENSMUSG00000041096.14	ENSMUST00000149685.8	2804	6	-10	0	-10	0	intron_retention	FALSE	canonical	3	155	junction_2	22.553639765383	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGAGTCTTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	151125431	151119847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857
tx.22012	chrX	-	2721	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	-25	0	-25	0	multi-exon	FALSE	canonical	3	155	junction_2	16.4189930669738	253	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	151125446	151119850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
tx.22013	chrX	-	2723	7	NIC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-24	0	intron_retention	FALSE	canonical	3	44	junction_2	53.7339123211155	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	151125445	151119850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_151120562_151121720_151122392_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
tx.22014	chrX	-	1088	3	FSM	ENSMUSG00000056679.14	ENSMUST00000137840.2	998	3	-88	-2	-88	2	multi-exon	FALSE	canonical	2	6	junction_1	2	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTTTATAGGATGGT	NA	False	NA	NA	False	NA	NA	NA	151151788	151150009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_151150266_151150416_151150507_151151046
tx.22015	chrX	-	7209	10	FSM	ENSMUSG00000045180.14	ENSMUST00000062317.5	6997	10	-212	0	-212	0	multi-exon	FALSE	canonical	3	14	junction_5	17.4384278371675	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	NA	False	NA	NA	NA	151552673	151392987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406314_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
tx.22016	chrX	-	5828	7	ISM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	108466	483	12245	0	3prime_fragment	TRUE	canonical	3	44	junction_5	7.67571929311297	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	NA	False	NA	NA	NA	151443991	151392987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259
tx.22017	chrX	-	7197	10	FSM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	-190	487	-186	-4	multi-exon	FALSE	canonical	3	27	junction_9	12.3987255418341	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTAGAATGTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	151552647	151392991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
tx.22018	chrX	+	1710	9	FSM	ENSMUSG00000025333.11	ENSMUST00000026383.4	1586	9	-115	-9	-50	9	multi-exon	FALSE	canonical	3	18	junction_8	3.91910385164772	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACATGGATTCTGTC	NA	False	NA	NA	False	NA	NA	NA	151564866	151591651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_151565289_151568038_151568149_151569121_151569217_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236
tx.22019	chrX	+	3266	4	FSM	ENSMUSG00000071665.11	ENSMUST00000096265.10	3210	4	-53	-3	-53	3	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTTGATGTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	151901728	151915860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_151901847_151902010_151902087_151909895_151909940_151912832
tx.2202	chr10	+	1427	11	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	2327	-3	1760	3	3prime_fragment	FALSE	canonical	3	63	junction_5	5.18169856321265	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATAGACTAAATACAG	NA	False	NA	NA	False	NA	NA	NA	127161951	127165815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
tx.22020	chrX	+	2271	11	FSM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	-13	0	-13	0	multi-exon	FALSE	canonical	3	216	junction_4	30.0765689532566	295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3163	False	NA	NA	False	NA	NA	NA	151922963	151954939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
tx.22021	chrX	+	2195	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	3	77	junction_3	67.8576942333489	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3154	False	NA	NA	False	NA	NA	NA	151922954	151954938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
tx.22022	chrX	+	4644	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	-112	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	62.3571019472947	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTTATTCTCCTCGT	3934	False	NA	NA	False	NA	NA	NA	152020410	152179016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_152020503_152020946_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
tx.22023	chrX	+	4515	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-41	-116	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	63.8435587980495	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACAGCTCCTTATTCTCC	3944	False	NA	NA	False	NA	NA	NA	152020420	152179012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_152020503_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
tx.22024	chrX	+	6812	7	FSM	ENSMUSG00000041649.14	ENSMUST00000112574.9	4752	7	-307	-1753	-25	1753	multi-exon	FALSE	canonical	3	21	junction_2	59.2527542725981	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGGAAGCAAGATTA	3960	False	NA	NA	False	NA	NA	NA	152020436	152180881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
tx.22025	chrX	+	7325	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	50	2790	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	65.2814419775381	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCGTGGGTTTTGTGTTT	4035	False	NA	NA	False	NA	NA	NA	152020511	152181918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_152020571_152020946_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
tx.22026	chrX	+	4553	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-31	-97	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	50.56349144063	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTTGTGATAGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	152142577	152179031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_152142706_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
tx.22027	chrX	+	4627	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	481	-238	481	-97	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTTGTGATAGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	152143089	152179031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
tx.22028	chrX	+	804	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	15	-31	-5	31	multi-exon	FALSE	canonical	3	149	junction_3	8.37987005998436	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTAGAGCTATACGATT	NA	False	NA	NA	False	NA	NA	NA	152506600	152524291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
tx.22029	chrX	+	720	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	7	619	7	37	multi-exon	FALSE	canonical	3	65	junction_2	49	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTATACGATTATTATC	NA	False	NA	NA	False	NA	NA	NA	152506612	152524297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_152506934_152508700_152508838_152524035
tx.2203	chr10	-	4298	12	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	-43	2	intron_retention	FALSE	canonical	2	10	junction_11	7.80972057996892	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTGTCATGTTGGGGA	2783	False	NA	NA	False	NA	NA	NA	127177798	127165748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
tx.22030	chrX	+	1415	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	-22	-618	-5	618	multi-exon	FALSE	canonical	3	163	junction_1	3	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTAAATTCTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	152506600	152512802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_152506934_152508700_152508838_152511857
tx.22031	chrX	-	1762	5	Genic_Genomic	ENSMUSG00000094196.3	novel	963	1	NA	NA	-9514	377	multi-exon	FALSE	canonical	3	11	junction_3	4.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTAATCTCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	153742015	153731161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_-_153732567_153733511_153733601_153740339_153740441_153741158_153741264_153741953
tx.22032	chrX	-	1762	5	NNC	ENSMUSG00000079350.3	novel	1646	4	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	13.4233937586588	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTTAGTTTCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	153778854	153768766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_153770173_153771107_153771197_153777179_153777280_153777995_153778100_153778791
tx.22033	chrX	-	1707	4	FSM	ENSMUSG00000055746.10	ENSMUST00000069477.8	1685	4	-23	1	-23	-1	multi-exon	FALSE	canonical	2	9	junction_2	9.56846672960488	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGGCATTTGTAACACT	NA	False	NA	NA	False	NA	NA	NA	153816311	153810197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_153811648_153812583_153812673_153815451_153815557_153816248
tx.22034	chrX	-	1607	3	NIC	ENSMUSG00000055746.10	novel	1685	4	NA	NA	-24	3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	13	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCATTTGTAACACTAAAA	NA	False	NA	NA	False	NA	NA	NA	153816312	153810193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_153811648_153812583_153812673_153816248
tx.22035	chrX	-	1652	4	FSM	ENSMUSG00000079349.10	ENSMUST00000069556.4	1360	4	-8	-284	-8	0	multi-exon	FALSE	canonical	3	37	junction_1	7.03957069398096	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTAGTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	153846149	153836056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_153837456_153838390_153838480_153844474_153844576_153846086
tx.22036	chrX	-	1760	5	NNC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	19.2272592950738	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTAGTTTCTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	153846150	153836053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_153837456_153838390_153838480_153844474_153844576_153845292_153845397_153846086
tx.22037	chrX	+	2736	2	Genic_Genomic	ENSMUSG00000082560.2	novel	702	1	NA	NA	-1008	1874	multi-exon	FALSE	canonical	3	18	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCAAGTGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	153967666	153971250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_+_153967809_153968656
tx.22038	chrX	-	1100	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	56	6	-48	-6	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	387	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCCTGAGCATTTTT	NA	False	NA	NA	False	NA	NA	NA	153999389	153996133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
tx.22039	chrX	+	1695	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	52	5	-10	3	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	586	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATTGTGAGTCTCCCAT	NA	False	NA	NA	False	NA	NA	NA	154045490	154080645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
tx.2204	chr10	-	4048	13	FSM	ENSMUSG00000025407.8	ENSMUST00000026474.5	4057	13	9	0	9	0	multi-exon	FALSE	canonical	2	10	junction_12	8.16964231503164	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCACCTGTCATGTTGGG	2747	False	NA	NA	False	NA	NA	NA	127177834	127165750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
tx.22040	chrX	-	980	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	10	0	10	0	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	352	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGCCATTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	154121453	154106913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
tx.22041	chrX	-	4296	10	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-41	0	intron_retention	FALSE	canonical	3	342	junction_4	49.2072964578563	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCGTCTCCATTATGC	NA	False	NA	NA	False	NA	NA	NA	156275103	156226850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
tx.22042	chrX	-	4759	11	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	151	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	69.0144912319145	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	NA	False	NA	NA	NA	156381488	156330819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381306
tx.22043	chrX	-	4754	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	43	0	7	0	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	NA	False	NA	NA	NA	156381668	156330819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
tx.22044	chrX	-	4604	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTTCTGTATCATATT	NA	False	NA	NA	False	NA	NA	NA	156381668	156330820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
tx.22045	chrX	-	3745	6	FSM	ENSMUSG00000046873.19	ENSMUST00000179062.8	3890	6	-22	167	7	-167	multi-exon	FALSE	canonical	3	30	junction_1	80.1164152967418	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	NA	NA	NA	156381668	156349109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
tx.22046	chrX	-	7333	6	NNC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	7	-167	intron_retention	FALSE	canonical	0	0	junction_1	90.6831847698348	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	NA	NA	NA	156381668	156349109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_156355683_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
tx.22047	chrX	-	5828	22	FSM	ENSMUSG00000025658.17	ENSMUST00000026750.15	5738	22	-88	-2	-88	2	multi-exon	FALSE	canonical	2	5	junction_13	3.75315438004534	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCCCTGTAAAGCACCG	NA	False	NA	NA	False	NA	NA	NA	156826378	156604429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
tx.22048	chrX	-	5435	20	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-72	-138	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	4.36873809883098	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGACTGGTGAGTTATAA	NA	False	NA	NA	False	NA	NA	NA	156826362	156604569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
tx.22049	chrX	-	5786	21	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-126	12	combination_of_known_splicesites	FALSE	canonical	2	5	junction_12	3.87298334620742	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCACCGACTTTATTCA	NA	False	NA	NA	False	NA	NA	NA	156826416	156604419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
tx.2205	chr10	-	2774	2	FSM	ENSMUSG00000047492.6	ENSMUST00000059718.6	5319	2	2544	1	2544	-1	multi-exon	FALSE	canonical	3	17	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTGTGTGTTCTT	7990	False	NA	NA	False	NA	NA	NA	127187736	127184726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127186881_127187116
tx.22050	chrX	+	2763	22	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-118	298	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	12.7339779727836	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGGATTAACAGTATTG	NA	False	NA	NA	False	NA	NA	NA	158038659	158147034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_158038716_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
tx.22051	chrX	+	3008	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	30	4206	30	298	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGGATTAACAGTATTG	NA	False	NA	NA	False	NA	NA	NA	158038883	158147034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
tx.22052	chrX	+	3227	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	18	1927	18	-1927	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	1017	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATAATGGTTTTTTGTT	5365	False	NA	NA	False	NA	NA	NA	158155191	158170997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
tx.22053	chrX	+	1631	6	NIC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	35	-3422	combination_of_known_splicesites	FALSE	canonical	3	222	junction_1	909.772147298432	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAAGATGGTATTGGA	5382	False	NA	NA	False	NA	NA	NA	158155208	158169502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_158155412_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
tx.22054	chrX	+	3553	15	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	1	15	junction_11	44.9721001946581	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCCATTGACCTTGA	NA	False	NA	NA	False	NA	NA	NA	158197528	158281753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158275319_158275408_158275893_158276081_158279030_158279306_158280579
tx.22055	chrX	+	3607	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-39	-3	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	231	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTGTGCCATTGACCT	NA	False	NA	NA	False	NA	NA	NA	158197528	158281750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
tx.22056	chrX	+	3992	8	NNC	ENSMUSG00000044150.13	novel	2513	11	NA	NA	16	10084	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_5	166.521433320465	73	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTTTGTGTGGTCATA	NA	False	NA	NA	False	NA	NA	NA	158315679	158344969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833
tx.22057	chrX	+	4173	12	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	3	111	junction_9	153.898914983368	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGGTGAGAGCATTCT	NA	False	NA	NA	False	NA	NA	NA	158315676	158376074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
tx.22058	chrX	+	3996	8	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	-36	30421	15	10084	5prime_fragment	FALSE	canonical	3	421	junction_5	81.1237402027902	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTTTGTGTGGTCATA	NA	False	NA	NA	False	NA	NA	NA	158315678	158344969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
tx.22059	chrX	+	3344	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	14	8	14	-8	multi-exon	FALSE	canonical	3	339	junction_9	109.675027103931	286	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	NA	False	NA	NA	NA	158315677	158376069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
tx.2206	chr10	+	4080	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-41	3	combination_of_known_junctions	TRUE	canonical	3	40	junction_11	41.0995379862634	41	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGGCCATCAGTCGCT	NA	False	NA	NA	False	NA	NA	NA	127216489	127335239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
tx.22060	chrX	+	3342	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_5	151.634892079191	93	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	NA	False	NA	NA	NA	158315677	158376070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
tx.22061	chrX	+	4725	11	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	3	-14	intron_retention	TRUE	canonical	3	374	junction_10	98.8130052169248	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	158315666	158376063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158375066
tx.22062	chrX	+	4174	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_9	183.348874873437	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	NA	False	NA	NA	NA	158315668	158376070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
tx.22063	chrX	+	6389	4	FSM	ENSMUSG00000044150.13	ENSMUST00000149054.8	898	4	-4620	-871	-4620	-8	multi-exon	FALSE	canonical	3	111	junction_1	176.99905837791	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	NA	False	NA	NA	NA	158345224	158376069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_158350362_158350914_158351011_158357940_158358094_158375066
tx.22064	chrX	+	5198	3	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	31254	-679	-2876	-8	3prime_fragment	FALSE	canonical	3	374	junction_2	83.5	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	NA	False	NA	NA	NA	158346968	158376069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_158351011_158357940_158358094_158375066
tx.22065	chrX	+	3438	18	FSM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	-19	3898	-19	4	multi-exon	FALSE	canonical	3	14	junction_4	4.015540744912	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGGGGAATTGGATTAT	NA	False	NA	NA	False	NA	NA	NA	158410248	158757167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
tx.22066	chrX	+	4569	29	FSM	ENSMUSG00000031303.9	ENSMUST00000033665.9	4348	29	-226	5	-226	-5	multi-exon	FALSE	canonical	3	16	junction_1	11.3624762858691	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACTGAAGTTCCCTTAT	NA	False	NA	NA	False	NA	NA	NA	158771202	158906342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
tx.22067	chrX	-	2824	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	15	9	15	-9	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	1879	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTTACAGTTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	158921394	158905213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
tx.22068	chrX	+	4689	25	NIC	ENSMUSG00000031298.16	novel	4601	26	NA	NA	-95	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_3	2.94126531728552	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTAAGTTTGGTTTGC	NA	False	NA	NA	False	NA	NA	NA	159173590	159281066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_159173746_159213345_159213391_159221190_159221310_159244338_159244378_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
tx.22069	chrX	+	3944	34	NIC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	18.7602436052563	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	NA	False	NA	NA	False	NA	NA	NA	159285156	159374135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_159285289_159285748_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
tx.2207	chr10	+	4170	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_11	25.3408705892718	286	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACTGGCCATCAGTC	NA	False	NA	NA	False	NA	NA	NA	127216492	127335236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
tx.22070	chrX	+	3976	34	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	19.0057262648391	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	NA	False	NA	NA	False	NA	NA	NA	159285157	159374135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_159285289_159285715_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
tx.22071	chrX	+	3951	34	FSM	ENSMUSG00000031295.14	ENSMUST00000112377.8	3947	34	-4	0	-4	0	multi-exon	FALSE	canonical	3	9	junction_1	19.1295904422098	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	NA	False	NA	NA	NA	159285157	159374137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_159285289_159285742_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
tx.22072	chrX	+	4126	33	FSM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	7	0	7	0	multi-exon	FALSE	canonical	3	71	junction_12	13.3855098894289	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	NA	False	NA	NA	NA	159285436	159374137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
tx.22073	chrX	+	4534	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14622	-6	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_16	103.266459220794	64	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	4653	False	NA	NA	False	NA	NA	NA	159921885	160041203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
tx.22074	chrX	+	4448	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12799	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	104.117313308381	26	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTAAGCCTTGGATGT	8020	False	NA	NA	False	NA	NA	NA	159932946	160041205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
tx.22075	chrX	+	4611	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12798	-8	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	111.428593103147	22	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	8021	False	NA	NA	False	NA	NA	NA	159932947	160041201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
tx.22076	chrX	+	4562	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5665	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	113.395590743203	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAAGCCTTGGATGTTAT	NA	False	NA	NA	False	NA	NA	NA	159940080	160041208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
tx.22077	chrX	+	4353	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5625	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	106.161164352296	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTAAGCCTTGGATGTTA	NA	False	NA	NA	False	NA	NA	NA	159940120	160041207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
tx.22078	chrX	+	5037	15	FSM	ENSMUSG00000108981.2	ENSMUST00000207320.2	5010	15	-37	10	-25	-10	multi-exon	TRUE	canonical	1	1	junction_1	5.75210697865378	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTCTCAACATAAAT	NA	False	NA	NA	False	NA	NA	NA	160081337	160149238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_160081394_160083835_160084019_160090688_160090874_160106160_160106266_160107235_160107483_160109457_160109572_160114803_160114930_160116053_160116204_160117551_160117699_160123836_160123936_160136646_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
tx.22079	chrX	+	186	2	Intergenic	novelGene_418	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCAAACTGTAACATAT	NA	False	NA	NA	False	NA	NA	NA	161491682	161596514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_161491829_161596474
tx.2208	chr10	+	946	4	FSM	ENSMUSG00000040280.11	ENSMUST00000035735.11	934	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	101	junction_1	3.29983164553722	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCGCCTGCTAATCA	NA	False	NA	NA	False	NA	NA	NA	127350823	127353023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127350908_127351267_127351357_127352133_127352195_127352311
tx.22080	chrX	+	1945	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	2	297	2	39	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	3017	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	161543399	161561791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
tx.22081	chrX	-	3793	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	69	0	69	0	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTCTGTGTATTATT	NA	False	NA	NA	False	NA	NA	NA	161612381	161561914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
tx.22082	chrX	-	3648	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	69	-2	69	2	multi-exon	FALSE	canonical	3	54	junction_9	58.6501491899211	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTGTATTATTCT	NA	False	NA	NA	False	NA	NA	NA	161612381	161561912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
tx.22083	chrX	-	2744	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	56	9871	56	127	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTGTTGGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	161612394	161571785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
tx.22084	chrX	-	2597	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	56	-128	56	127	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTGTTGGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	161612394	161571785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
tx.22085	chrX	-	2300	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	-4	-209	-4	209	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGTACGTATTTATA	NA	False	NA	NA	False	NA	NA	NA	161671447	161639843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
tx.22086	chrX	+	2377	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	-266	988	-1	18	multi-exon	FALSE	canonical	2	41	junction_1	44.8724185955837	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTGTGTTTTCTCCA	NA	False	NA	NA	False	NA	NA	NA	161684599	161814333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
tx.22087	chrX	+	2228	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-46	1171	-19	18	multi-exon	TRUE	canonical	2	133	junction_1	30.7828415409191	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTGTGTTTTCTCCA	NA	False	NA	NA	False	NA	NA	NA	161684581	161814333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
tx.22088	chrX	+	3361	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	-157	-5	-29	5	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGAATGACTTCTT	NA	False	NA	NA	False	NA	NA	NA	162691983	162712547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
tx.22089	chrX	+	1904	5	FSM	ENSMUSG00000031367.16	ENSMUST00000033734.14	1785	5	-114	-5	11	5	multi-exon	FALSE	canonical	3	11	junction_4	61.936963923008	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCTTTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	162692023	162716360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162715128
tx.2209	chr10	-	1922	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1246	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	594.982519362634	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	NA	False	NA	NA	NA	127356987	127353184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_127353617_127353652_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786
tx.22090	chrX	+	2204	5	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	59.8351903147303	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	162692012	162712542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162711021
tx.22091	chrX	-	1815	12	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-5	-829	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	279.519747524568	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGTCTTTTTATAGC	NA	False	NA	NA	False	NA	NA	NA	162741662	162719267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
tx.22092	chrX	-	1979	11	FSM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-73	829	-1	-829	multi-exon	FALSE	canonical	3	107	junction_1	287.175643117588	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGTCTTTTTATAGC	NA	False	NA	NA	False	NA	NA	NA	162741658	162719267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
tx.22093	chrX	-	1497	4	FSM	ENSMUSG00000031370.13	ENSMUST00000139166.2	504	4	-16	-977	-16	977	multi-exon	FALSE	canonical	3	635	junction_1	90.1566537878499	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCCTTGAAGATATTT	NA	False	NA	NA	False	NA	NA	NA	162741174	162735609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911
tx.22094	chrX	-	1704	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-64	2227	-1	978	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	224	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	162741658	162735608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
tx.22095	chrX	-	1597	6	FSM	ENSMUSG00000031370.13	ENSMUST00000147928.8	460	6	-110	-1027	-1	978	multi-exon	FALSE	canonical	3	79	junction_5	268.200372855818	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	162741658	162735608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
tx.22096	chrX	-	1539	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-4	978	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	162741661	162735608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
tx.22097	chrX	-	1679	3	ISM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	451	-2	451	2	3prime_fragment	FALSE	canonical	3	523	junction_1	14.5	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	162858666	162853698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_162855224_162856285_162856347_162858573
tx.22098	chrX	-	1720	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	-6	-2	-6	2	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	345	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	162859152	162853698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
tx.22099	chrX	+	1379	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	109	111	-7	-111	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAAATATTTCCTGAT	NA	False	NA	NA	False	NA	NA	NA	163052535	163155896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
tx.221	chr1	+	4275	29	NIC	ENSMUSG00000026074.16	novel	5632	30	NA	NA	-144	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	25.9180419391432	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	39939928	40064128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
tx.2210	chr10	-	2032	13	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	-178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	578.432940509673	355	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	NA	False	NA	NA	NA	127358270	127353185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_127353617_127353652_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
tx.22100	chrX	+	3210	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	7	-5	-4	0	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	163202789	163216912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
tx.22101	chrX	+	3569	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	24	1	4	-1	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	163202806	163216911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
tx.22102	chrX	+	3540	5	ISM	ENSMUSG00000031381.17	ENSMUST00000112255.8	3597	6	2674	-2	-1	-1	3prime_fragment	FALSE	canonical	3	160	junction_1	42.1337157155644	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	163205578	163216911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
tx.22103	chrX	+	6632	4	FSM	ENSMUSG00000031381.17	ENSMUST00000155849.2	3321	4	-1455	-1856	-1455	0	multi-exon	FALSE	canonical	3	227	junction_1	22.7596133534821	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTTGTCTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	163207050	163216907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_163211061_163211535_163211669_163211806_163212014_163214625
tx.22104	chrX	-	4047	15	FSM	ENSMUSG00000061778.11	ENSMUST00000004715.2	2015	15	8	-2040	0	0	multi-exon	FALSE	canonical	3	42	junction_12	10.321366781822	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	NA	NA	NA	163763323	163719164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
tx.22105	chrX	+	2857	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	97	-1	-23	1	multi-exon	FALSE	canonical	3	98	junction_5	7.72981241687015	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTTTTCTTTTACT	NA	False	NA	NA	False	NA	NA	NA	163763684	163780266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
tx.22106	chrX	+	2979	8	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-31	0	intron_retention	TRUE	canonical	3	98	junction_5	7.51596939312337	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	NA	NA	NA	163763676	163780265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163779118_163779765
tx.22107	chrX	+	1902	4	FSM	ENSMUSG00000040621.15	ENSMUST00000056410.11	1862	4	-42	2	-42	0	multi-exon	FALSE	canonical	3	11	junction_1	17.1529071070248	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGACTGGATTTGATCT	NA	False	NA	NA	False	NA	NA	NA	164953407	164973506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_164953547_164961787_164961827_164963348_164963806_164972239
tx.22108	chrX	-	3553	23	FSM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	-3	903	-3	-903	multi-exon	FALSE	canonical	3	107	junction_14	25.8655535317559	297	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	NA	NA	NA	165223703	165173931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
tx.22109	chrX	-	1389	3	NNC	ENSMUSG00000079316.11	novel	1447	3	NA	NA	-40	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	280.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGCAATGCTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	165262682	165240246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_165241340_165245310_165245339_165262414
tx.2211	chr10	-	2068	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	43	178	0	-178	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	1325	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	NA	False	NA	NA	NA	127358270	127353185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
tx.22110	chrX	-	1263	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	182	2	-39	-2	multi-exon	FALSE	canonical	3	555	junction_2	7.5	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACGTTGCAATGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	165262681	165240250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_165241340_165245310_165245339_165262535
tx.22111	chrX	-	5311	4	ISM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	25	0	25	0	intron_retention	FALSE	canonical	3	63	junction_2	3.09120616516523	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATTCTCCAATATTT	NA	False	NA	NA	False	NA	NA	NA	165293449	165282807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901
tx.22112	chrX	-	4039	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	11	0	11	0	multi-exon	FALSE	canonical	3	63	junction_2	3.35410196624968	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATTCTCCAATATTT	NA	False	NA	NA	False	NA	NA	NA	165293463	165282807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293288
tx.22113	chrX	-	2731	12	FSM	ENSMUSG00000000402.3	ENSMUST00000000412.3	2704	12	-18	-9	-18	9	multi-exon	FALSE	canonical	2	11	junction_6	3.09892009982897	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTTTGTCATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	165368734	165305993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_165306968_165310309_165310576_165314967_165315070_165319195_165319277_165321409_165321731_165329416_165329540_165331818_165331954_165335420_165335541_165339965_165340086_165345937_165346031_165351404_165351518_165368451
tx.22114	chrX	-	616	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	152	0	-14	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	271	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	165992159	165990088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_165990532_165990932_165991048_165992101
tx.22115	chrX	-	1471	4	NNC	ENSMUSG00000049775.17	novel	768	3	NA	NA	-4689	-1	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_3	563.006414015171	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGTCTGCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	165997000	165990089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_165990532_165990932_165991048_165992101_165992341_165996325
tx.22116	chrX	-	3675	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	22	2	-17	-2	multi-exon	TRUE	canonical	3	187	junction_5	11.6535640709422	405	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTCTTGTCATCCTTT	NA	False	NA	NA	False	NA	NA	NA	166165723	166129319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
tx.22117	chrX	-	4266	11	NIC	ENSMUSG00000031358.18	novel	2316	12	NA	NA	44	0	intron_retention	FALSE	canonical	3	28	junction_8	6.44980619863884	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAGAGGAGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	167456850	167437112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
tx.22118	chrX	-	2277	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	40	-1	40	1	multi-exon	FALSE	canonical	3	28	junction_9	6.17646827325928	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGAGGAGTTTTGCTC	NA	False	NA	NA	False	NA	NA	NA	167456854	167437111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
tx.22119	chrX	-	2405	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	-88	3	4	-3	multi-exon	FALSE	canonical	3	290	junction_6	111.381351920129	343	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTTAGAGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	168103364	168094528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
tx.2212	chr10	-	4896	30	ISM	ENSMUSG00000040249.16	ENSMUST00000049149.15	14888	89	67635	-1	-3596	1	3prime_fragment	FALSE	canonical	3	26	junction_28	10.903751440746	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCACTGTGTCTGCATG	NA	False	NA	NA	False	NA	NA	NA	127389382	127374028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235
tx.22120	chrX	-	2546	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	-76	3	2	-3	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTTAGAGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	168103366	168094528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
tx.22121	chrX	+	2708	12	NNC	ENSMUSG00000035299.17	novel	3974	10	NA	NA	-15	-756	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.88032288306345	14	1	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACGGTCACTCAGGGTC	NA	False	NA	NA	False	NA	NA	NA	168662602	168772811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_168662906_168709949_168710666_168749058_168749155_168759917_168760026_168764880_168765030_168766951_168767080_168767994_168768139_168768931_168769094_168770554_168770763_168771858_168772246_168772319_168772426_168772610
tx.22122	chrX	+	1285	2	ISM	ENSMUSG00000095562.9	ENSMUST00000180251.9	597	3	332	-253	159	-233	3prime_fragment	FALSE	canonical	3	442	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCGTCAGGTAGGACACG	NA	False	NA	NA	False	NA	NA	NA	168793149	168802044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_168794060_168801669
tx.22123	chrX	+	3122	6	Intergenic	novelGene_423	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_2	32.6030673403593	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCGGCGTCGGCTCCTCC	6139	False	NA	NA	False	NA	NA	NA	169097796	169105547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_169098429_169099553_169099673_169099929_169100868_169101639_169101789_169102375_169102617_169104504
tx.22124	chrX	+	2908	5	Intergenic	novelGene_424	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	16.3764312351623	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCGGCGTCGGCTCCTCC	81	False	NA	NA	False	NA	NA	NA	169097891	169105547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_169098429_169099929_169100868_169101639_169101789_169102375_169102617_169104504
tx.22125	chrX	+	2154	4	Intergenic	novelGene_425	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_3	13.5728487143349	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCGGCGTCGGCTCCTCC	987	False	NA	NA	False	NA	NA	NA	169100146	169105547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_169100868_169101639_169101789_169102375_169102617_169104504
tx.22126	chrX_GL456233v2_random	-	2492	8	Intergenic	novelGene_429	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_7	117.818088767457	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTCTTCTTTAATAA	NA	False	NA	NA	False	NA	NA	NA	134107	105705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127507_133984
tx.22127	chrX_GL456233v2_random	-	2535	8	Intergenic	novelGene_430	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	327	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTCTTCTTTAATAA	NA	False	NA	NA	False	NA	NA	NA	134112	105705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
tx.22128	chrX_GL456233v2_random	-	2469	8	Intergenic	novelGene_431	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_6	123.884080115737	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTTTCTTCTTTAATA	NA	False	NA	NA	False	NA	NA	NA	134112	105706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127454_127545_133984
tx.22129	chrX_GL456233v2_random	+	2271	8	Intergenic	novelGene_433	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_5	6.38557046817915	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAGGGTTAAATTTTC	NA	False	NA	NA	False	NA	NA	NA	251309	468931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_460904_461142_467193_467333_467938
tx.2213	chr10	-	3275	18	ISM	ENSMUSG00000040249.16	ENSMUST00000049149.15	14888	89	74710	0	-3230	0	3prime_fragment	FALSE	canonical	3	36	junction_15	7.63845670022719	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCCACTGTGTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	127382307	127374029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262
tx.22130	chrX_GL456233v2_random	+	1977	7	Intergenic	novelGene_434	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	16.3477827242718	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAGGGTTAAATTTTC	NA	False	NA	NA	False	NA	NA	NA	251323	468931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_422004_422125_460904_461142_467193_467333_467938
tx.22131	chrY	+	5309	2	Intergenic	novelGene_426	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTC	NA	False	NA	NA	False	NA	NA	NA	47718852	47725618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrY_+_47722348_47723804
tx.22132	chrY	+	5307	2	Intergenic	novelGene_427	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	47718853	47725617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrY_+_47722348_47723804
tx.22133	chrY	+	794	4	NNC	ENSMUSG00000096768.9	novel	774	4	NA	NA	-224	0	intron_retention	FALSE	canonical	3	234	junction_1	770.620673368047	35	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	3728	False	NA	NA	False	NA	NA	NA	90795782	90827734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrY_+_90795948_90796858_90797249_90804564_90804687_90827617
tx.22134	chrY	+	1136	3	ISM	ENSMUSG00000096768.9	ENSMUST00000177591.2	774	4	-359	-1	172	0	intron_retention	FALSE	canonical	3	607	junction_1	708	1377	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	4297	False	NA	NA	False	NA	NA	NA	90796351	90827734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrY_+_90797249_90804564_90804687_90827617
tx.22135	SIRV1	-	1299	4	FSM	SIRV1A	SIRV102	1300	4	1	0	1	0	multi-exon	FALSE	canonical	3	4191	junction_1	833.052752764727	1831	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10365	1006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
tx.22136	SIRV1	+	463	3	FSM	SIRV1B	SIRV109	464	3	1	0	1	0	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	423	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10712	11643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV1_+_10792_10882_11058_11434
tx.22137	SIRV2	-	685	5	FSM	SIRV2A	SIRV203	686	5	1	0	1	0	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	392	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5894	3665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
tx.22138	SIRV3	-	478	3	FSM	SIRV3B	SIRV308	479	3	1	0	1	0	multi-exon	FALSE	canonical	3	5391	junction_1	17	650	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTGTATGGCGGA	NA	False	NA	NA	False	NA	NA	NA	1981	1000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV3_-_1168_1532_1765_1902
tx.22139	SIRV3	-	795	3	FSM	SIRV3C	SIRV309	796	3	1	0	1	0	multi-exon	FALSE	canonical	3	1394	junction_2	16	176	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	9942	8797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV3_-_8976_9189_9299_9434
tx.2214	chr10	+	3742	22	FSM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	33	0	17	0	multi-exon	FALSE	canonical	3	34	junction_1	71.0521510108266	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATCTACTGTACACA	2304	False	NA	NA	False	NA	NA	NA	127478887	127496826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
tx.22140	SIRV4	+	1566	3	FSM	SIRV4C	SIRV409	1567	3	1	0	1	0	multi-exon	FALSE	canonical	3	1019	junction_2	11.5	394	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1001	3403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV4_+_1347_1678_1886_2389
tx.22141	SIRV4	+	949	2	FSM	SIRV4C	SIRV410	950	2	1	0	1	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	293	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1456	2771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV4_+_1886_2251
tx.22142	SIRV4	-	616	2	FSM	SIRV4B	SIRV406	617	2	1	0	1	0	multi-exon	FALSE	canonical	3	2584	junction_1	0	289	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	5157	3637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV4_-_4104_5007
tx.22143	SIRV4	-	669	4	FSM	SIRV4A	SIRV403	670	4	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_3	3065.46367708958	475	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15121	8322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
tx.22144	SIRV4	-	569	5	FSM	SIRV4A	SIRV408	570	5	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_4	2658.88059152719	480	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15121	8323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
tx.22145	SIRV5	+	2028	16	FSM	SIRV5A	SIRV505	2029	16	1	0	1	0	multi-exon	FALSE	canonical	3	5578	junction_10	1970.92572045614	4430	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1001	10991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
tx.22146	SIRV6	+	574	8	FSM	SIRV6A	SIRV602	574	8	0	0	0	0	multi-exon	TRUE	canonical	3	8561	junction_3	5767.41567350754	811	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
tx.22147	SIRV7	-	2462	5	FSM	SIRV7A	SIRV701	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	1944	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGTGTTAATATGAATC	NA	False	NA	NA	False	NA	NA	NA	147923	1003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
tx.22149	chr1	-	7499	16	NNC	ENSMUSG00000025912.17	novel	4980	16	NA	NA	-161	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	12.4622095419178	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCATTGCTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	9770595	9737631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_9740238_9741803_9741984_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9753510_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
tx.2215	chr10	-	3376	3	Antisense	novelGene_ENSMUSG00000002147.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCCATTCTGTAAATTC	NA	False	NA	NA	False	NA	NA	NA	127489317	127484132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_-_127484385_127485942_127486154_127486404
tx.22150	chr1	+	3546	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	-157	317	-157	-244	multi-exon	TRUE	canonical	3	15	junction_1	31.0518090254014	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAATATTGTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	9868174	9970751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
tx.22151	chr1	+	4392	10	NIC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-3	1521	combination_of_known_junctions	TRUE	canonical	3	10	junction_9	7.71402442564879	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCTAGACTTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	9978859	9994271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9991052
tx.22152	chr1	+	2934	8	FSM	ENSMUSG00000057715.14	ENSMUST00000171690.9	6158	8	0	3224	0	-1406	multi-exon	FALSE	canonical	3	8	junction_7	6.29868791001389	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGCATGGAAAAGTAATC	NA	False	NA	NA	False	NA	NA	NA	11484328	11668811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374_11666542_11667188
tx.22154	chr1	-	8350	23	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	190	-20	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_22	13.1208621970276	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	13444063	13209348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13443814
tx.22155	chr1	-	5884	4	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	18706	1532	-3429	-1532	3prime_fragment	FALSE	canonical	3	2230	junction_2	161.742593854144	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	13712064	13695085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454
tx.22156	chr1	-	3901	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-51	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_17	12.8453672663576	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCCTTGGATGTCAGT	NA	False	NA	NA	False	NA	NA	NA	14374903	14239178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14374796
tx.22157	chr1	-	4558	27	FSM	ENSMUSG00000032769.6	ENSMUST00000041447.5	4263	27	-282	-13	-282	13	multi-exon	FALSE	canonical	1	1	junction_1	2.09712398157163	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTATGCATTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	14989368	14942858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_14943953_14944587_14944686_14946072_14946184_14950422_14950492_14951820_14952004_14952335_14952466_14954333_14954504_14955973_14956064_14957110_14957277_14957818_14957890_14959617_14959717_14960618_14960679_14961528_14961623_14963406_14963574_14966715_14966831_14968232_14968398_14968479_14968650_14969570_14969672_14970288_14970389_14972085_14972135_14973369_14973507_14974370_14974517_14974676_14974786_14976146_14976255_14980953_14981130_14982583_14982744_14988948
tx.22158	chr1	-	1565	7	NIC	ENSMUSG00000025939.20	novel	1508	7	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	195.295289241702	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTCTGTTCTTAAATT	NA	False	NA	NA	False	NA	NA	NA	16689512	16611011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_16612014_16614172_16614257_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
tx.22159	chr1	+	3821	2	NIC	ENSMUSG00000025940.7	novel	1636	3	NA	NA	-23	3	intron_retention	FALSE	canonical	3	533	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTATGTGTTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	16735407	16748422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_16737998_16747191
tx.2216	chr10	+	1527	5	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15379	0	-1035	0	3prime_fragment	FALSE	canonical	3	216	junction_3	13.3229125944742	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATCTACTGTACACA	1039	False	NA	NA	False	NA	NA	NA	127494233	127496826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
tx.22160	chr1	-	2652	11	NNC	ENSMUSG00000041779.6	novel	6492	11	NA	NA	-5	-3815	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	24.6538029520802	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCCTGGCCTTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	21149458	21070337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083104_21083625_21083736_21107620_21107685_21149217
tx.22161	chr1	+	1032	5	ISM	ENSMUSG00000025934.16	ENSMUST00000121676.8	894	8	16520	-190	3606	190	3prime_fragment	FALSE	canonical	3	69	junction_1	2	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTGGAGTATTCGAACA	NA	False	NA	NA	False	NA	NA	NA	21327350	21335435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
tx.22162	chr1	-	4779	8	NIC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-62	-3	intron_retention	FALSE	canonical	3	380	junction_4	36.2367498655209	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTTATTTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	23961460	23884708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
tx.22163	chr1	-	6058	22	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	-36	3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_20	16.6794508792302	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTAATGCTTGCTTAC	NA	False	NA	NA	False	NA	NA	NA	24139333	24050170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
tx.22164	chr1	+	4430	16	NNC	ENSMUSG00000073725.9	novel	4453	16	NA	NA	10	-10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	38.5555875760354	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCACGACTTCGACTAA	NA	False	NA	NA	False	NA	NA	NA	24717720	24804519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753992_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
tx.22165	chr1	+	4243	7	NIC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	43.3461519501892	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGAATTGTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	33758963	33781640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_33759255_33760688_33760781_33762866_33763087_33773782_33773940_33775880_33775964_33777368_33777462_33778333
tx.22166	chr1	-	2323	7	NNC	ENSMUSG00000042182.17	novel	2487	7	NA	NA	-36	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	12.1849178176228	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCACTTTCTTATGGTT	NA	False	NA	NA	False	NA	NA	NA	33946933	33891135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946843
tx.22167	chr1	-	1131	3	ISM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	1	25713	1	-4007	5prime_fragment	FALSE	canonical	3	39	junction_2	1	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAACAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	33946896	33916845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_33917519_33922521_33922730_33946646
tx.2217	chr10	-	2063	6	ISM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	1756	0	527	0	3prime_fragment	FALSE	canonical	3	47	junction_1	9.57914401186244	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	NA	False	NA	NA	NA	127500823	127496786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133
tx.22172	chr1	+	1456	9	ISM	ENSMUSG00000050122.20	ENSMUST00000238425.2	4095	29	71275	46269	-60	0	internal_fragment	TRUE	canonical	3	35	junction_7	9.96164519544839	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGATTTCTCCCTCA	NA	False	NA	NA	False	NA	NA	NA	37139688	37180417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
tx.22173	chr1	-	3722	2	NIC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	-48	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTTCTGTTTCAAGAT	6327	False	NA	NA	False	NA	NA	NA	37469129	37456166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_37459709_37468949
tx.22174	chr1	-	7208	16	NIC	ENSMUSG00000026110.16	novel	7251	16	NA	NA	-28	-44	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	53.3381664476761	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTGAATCAAGATTCCT	NA	False	NA	NA	False	NA	NA	NA	37580125	37478464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537680_37537822_37575119_37575486_37580045
tx.22175	chr1	-	6709	5	NIC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	23	-8	intron_retention	FALSE	canonical	3	173	junction_3	16.5906600230371	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATTCTTTGGCTAT	NA	False	NA	NA	False	NA	NA	NA	37929465	37913889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_37918445_37918640_37918702_37920013_37921780_37924295_37924398_37929240
tx.22176	chr1	-	6094	23	NNC	ENSMUSG00000037138.19	novel	6010	23	NA	NA	-371	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2.15322168769582	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGCAGCACTGCGACT	NA	False	NA	NA	False	NA	NA	NA	38666653	38216405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_38218652_38220340_38220565_38220695_38220746_38224405_38224500_38226016_38226089_38230251_38230389_38232646_38232711_38242891_38243020_38243970_38244173_38246986_38247112_38248633_38249729_38257343_38257537_38291721_38291763_38308790_38308843_38359192_38359245_38368952_38368990_38380801_38380883_38445576_38445625_38573986_38574373_38574491_38574805_38575906_38576028_38666169_38666326_38666476
tx.22177	chr1	-	3570	19	FSM	ENSMUSG00000003134.11	ENSMUST00000193823.2	3512	19	-46	-12	9	12	multi-exon	FALSE	canonical	3	38	junction_11	8.13011472441188	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGGCACTTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	39517827	39412384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
tx.22178	chr1	+	5805	30	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-145	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	27.9486534467889	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGGCTTCATGGTCAT	NA	False	NA	NA	False	NA	NA	NA	39939927	40065465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
tx.22179	chr1	-	3276	8	FSM	ENSMUSG00000025993.11	ENSMUST00000027137.11	3370	8	0	94	0	-94	multi-exon	FALSE	canonical	0	0	junction_6	1.82946406783796	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTTTACTGAGTTG	NA	False	NA	NA	False	NA	NA	NA	45964742	45947321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_45948880_45950051_45950691_45951395_45951642_45957468_45957596_45958044_45958161_45960315_45960476_45963876_45963945_45964380
tx.2218	chr10	-	2611	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	-29	0	-29	0	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	NA	False	NA	NA	NA	127502608	127496786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
tx.22180	chr1	-	3046	5	FSM	ENSMUSG00000026107.12	ENSMUST00000186684.7	2677	5	0	-369	0	0	multi-exon	FALSE	canonical	3	52	junction_2	4.09267638593623	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	False	NA	NA	False	NA	NA	NA	51517558	51508646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636
tx.22181	chr1	-	4640	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	78.4988039540872	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	52272381	52224438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
tx.22182	chr1	+	2882	5	FSM	ENSMUSG00000043015.16	ENSMUST00000185790.7	1571	5	-94	-1217	0	0	multi-exon	FALSE	canonical	1	5	junction_2	17.1537167984084	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	52669861	52691078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_52670011_52676523_52676640_52684419_52684646_52687908_52688086_52688864
tx.22183	chr1	+	6992	4	FSM	ENSMUSG00000043015.16	ENSMUST00000186903.7	4338	4	-2654	0	-2654	0	multi-exon	FALSE	canonical	3	36	junction_1	4.08248290463863	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	52678020	52691078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_52682396_52684419_52684646_52687908_52688086_52688864
tx.22184	chr1	-	3490	2	FSM	ENSMUSG00000043629.13	ENSMUST00000114492.8	3565	2	80	-5	80	5	multi-exon	FALSE	canonical	3	11	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTCCTCATTTAATTG	254	False	NA	NA	False	NA	NA	NA	52992429	52961477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_52964894_52992355
tx.22185	chr1	+	4765	2	FSM	ENSMUSG00000026096.15	ENSMUST00000153939.2	4005	2	-4	-756	-1	756	multi-exon	FALSE	canonical	3	159	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTACTTGTTTGCTCATT	NA	False	NA	NA	False	NA	NA	NA	53352811	53358573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_53353018_53354014
tx.22186	chr1	+	1574	7	NIC	ENSMUSG00000026096.15	novel	1868	8	NA	NA	-1	-17	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	52.920275467495	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCAGTCAAG	NA	False	NA	NA	False	NA	NA	NA	53352811	53365309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53362325_53362430_53365162
tx.22187	chr1	-	4254	4	FSM	ENSMUSG00000117809.2	ENSMUST00000236737.2	300	4	-92	-3862	-92	3862	multi-exon	FALSE	canonical	3	541	junction_1	43.3999487966928	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTAATTTTTACCT	NA	False	NA	NA	False	NA	NA	NA	53391870	53383775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_53387718_53389145_53389222_53390038_53390093_53391688
tx.22188	chr1	-	7379	28	NIC	ENSMUSG00000052331.15	novel	6140	28	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	2.75322482074753	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTTTTCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	54965522	54684500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_54688760_54690827_54690920_54692901_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
tx.22189	chr1	-	204	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGGTTGTTTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	54926536	54926332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_54926300_54926500
tx.2219	chr10	-	2494	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	-183	0	-105	0	multi-exon	FALSE	canonical	3	27	junction_1	16.4851448279959	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGGCCCCCTTCCCCT	NA	False	NA	NA	False	NA	NA	NA	127502684	127496787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
tx.22190	chr1	+	4802	4	NIC	ENSMUSG00000025981.14	novel	1733	5	NA	NA	46	-8	intron_retention	FALSE	canonical	3	135	junction_3	25.8499946271217	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGACCTTGGTTATTT	3605	False	NA	NA	False	NA	NA	NA	55091974	55111853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_55092150_55100433_55100584_55103339_55106758_55110794
tx.22191	chr1	-	2288	4	FSM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	-18	-218	-18	218	multi-exon	FALSE	canonical	3	14	junction_1	26.1576417557513	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGATATTGATTCTGC	NA	False	NA	NA	False	NA	NA	NA	57416721	57398162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_57399823_57401724_57401923_57414406_57414679_57416563
tx.22193	chr1	+	4059	14	NIC	ENSMUSG00000038305.16	novel	2315	13	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	16.1274509627595	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCTGTAGAACCGTT	NA	False	NA	NA	False	NA	NA	NA	57813663	57987553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_57813961_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
tx.22194	chr1	+	2313	13	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	19.1485421551268	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	57813999	57986124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
tx.22195	chr1	+	2325	13	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	16.9777223312067	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	57813984	57986124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
tx.22196	chr1	-	3018	7	FSM	ENSMUSG00000054770.17	ENSMUST00000161608.8	2495	7	-528	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_6	29.1228241914978	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	58009211	57994416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58008565
tx.22197	chr1	-	2879	6	ISM	ENSMUSG00000026034.18	ENSMUST00000123580.8	2102	7	21	1	21	-1	intron_retention	FALSE	canonical	3	188	junction_3	15.3049011757672	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTCTATAGCTTGGT	NA	False	NA	NA	False	NA	NA	NA	58455903	58451159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748
tx.22198	chr1	+	3986	6	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	23	7	intron_retention	FALSE	canonical	3	232	junction_2	24.6203168135587	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACACTGTATTTCTCTA	NA	False	NA	NA	False	NA	NA	NA	58484448	58501432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_58484794_58486792_58487249_58489545_58491375_58494755_58494895_58496938_58497023_58500299
tx.22199	chr1	+	2750	11	FSM	ENSMUSG00000026027.14	ENSMUST00000123301.8	2070	11	38	-718	38	0	multi-exon	FALSE	canonical	1	4	junction_7	23.192455669894	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTTCTTCATCTAT	NA	False	NA	NA	False	NA	NA	NA	59012718	59034874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031809_59031915_59032051_59032297_59032719_59032763_59033451
tx.222	chr1	+	4288	30	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	24.4259661839409	28	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	39940054	40064129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
tx.2220	chr10	-	1682	5	ISM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	1864	2	713	-2	3prime_fragment	FALSE	canonical	3	27	junction_1	18.389874931603	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCATGGCCCCCTTCCC	NA	False	NA	NA	False	NA	NA	NA	127500637	127496789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133
tx.22200	chr1	-	1897	12	NIC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	-7	32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	73.6320986419185	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCGCCAGTTATTTTCC	4045	False	NA	NA	False	NA	NA	NA	59159260	59139716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59159110
tx.22201	chr1	-	5778	31	ISM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	21461	3	3356	-3	3prime_fragment	TRUE	canonical	2	89	junction_12	16.9856475361472	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTTCTATGACTGTG	NA	False	NA	NA	False	NA	NA	NA	59254929	59202087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260
tx.22202	chr1	+	15740	55	FSM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	-15	6	-15	-6	multi-exon	TRUE	canonical	1	1	junction_10	5.85232065632702	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTATTTGGTTTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	60219742	60377481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
tx.22203	chr1	+	2121	13	NNC	ENSMUSG00000049439.14	novel	2223	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	28.4717208627945	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	60382481	60427219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_60382617_60391279_60391330_60392169_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
tx.22204	chr1	+	5898	10	NNC	ENSMUSG00000026782.16	novel	1671	10	NA	NA	-48	-2	intron_retention	TRUE	canonical	3	27	junction_5	60.4060335470629	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAGTGTCTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	60448729	60520315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
tx.22205	chr1	+	3327	15	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	-353	10634	64	-10634	5prime_fragment	FALSE	canonical	2	3	junction_2	4.95695759225642	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTCTTTCCATGTGA	4072	False	NA	NA	False	NA	NA	NA	62742507	62825506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439
tx.22206	chr1	+	3687	2	FSM	ENSMUSG00000086730.3	ENSMUST00000141027.2	462	2	304	-3529	-91	3176	multi-exon	FALSE	canonical	3	28	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGCTTTAAAAATGGTC	NA	False	NA	NA	False	NA	NA	NA	63239775	63250302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_63239834_63246673
tx.22207	chr1	-	4005	5	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-14	-3400	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	5.02493781056044	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAATGCAAAA	NA	False	NA	NA	False	NA	NA	NA	64161455	64072005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058_64160299_64161360
tx.22208	chr1	+	6943	10	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-2	-1578	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	37.357465745331	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	64571975	64642129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
tx.22209	chr1	-	704	3	FSM	ENSMUSG00000067299.12	ENSMUST00000045028.15	613	3	-61	-30	-61	30	multi-exon	FALSE	canonical	3	39	junction_1	4.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATTTGCTTCTGTTTTTT	7559	False	NA	NA	False	NA	NA	NA	65102672	65101000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_65101342_65102217_65102461_65102552
tx.2221	chr10	+	1521	7	FSM	ENSMUSG00000040195.12	ENSMUST00000118612.8	1522	7	1	0	1	0	multi-exon	FALSE	canonical	3	127	junction_4	19.2411595862157	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGAGTTTGACTACTCT	NA	False	NA	NA	False	NA	NA	NA	127512933	127531037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297
tx.22210	chr1	-	1863	4	NNC	ENSMUSG00000044816.11	novel	594	7	NA	NA	12887	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	12.1197726417986	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGTTGTTTTGTTG	9662	False	NA	NA	False	NA	NA	NA	65149386	65146470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_65147965_65148620_65148736_65149035_65149124_65149220
tx.22211	chr1	+	2279	13	ISM	ENSMUSG00000025991.9	ENSMUST00000027144.8	5555	38	81478	0	81478	0	3prime_fragment	FALSE	canonical	0	0	junction_2	3.27448045073142	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCAGTTGAATTCTTT	NA	False	NA	NA	False	NA	NA	NA	67243662	67270418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_67243862_67244290_67244359_67245914_67245991_67248754_67248833_67251561_67251670_67253175_67253266_67254568_67254740_67257010_67257086_67259661_67259761_67266282_67266343_67267394_67267508_67268547_67268678_67269406
tx.22212	chr1	-	3077	12	NNC	ENSMUSG00000055322.17	novel	2813	12	NA	NA	375	281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.3677065799583	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACCTGCTGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	73969289	73952788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73969253
tx.22213	chr1	+	2140	14	NNC	ENSMUSG00000026177.12	novel	604	4	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.6190278859903	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	6352	False	NA	NA	False	NA	NA	NA	74415742	74425221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_74415821_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
tx.22214	chr1	+	3383	6	ISM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	803	3	150	0	3prime_fragment	FALSE	canonical	3	15	junction_1	3.84707681233427	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGTGCCCCCACCTCTG	4113	False	NA	NA	False	NA	NA	NA	74431470	74436441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
tx.22215	chr1	-	1554	9	NIC	ENSMUSG00000026171.13	novel	1451	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	22	junction_3	29.3233588628588	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTATGTGGTATGA	NA	False	NA	NA	False	NA	NA	NA	74640544	74632911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637952_74638224_74638300_74640483
tx.22216	chr1	+	2674	7	ISM	ENSMUSG00000033276.19	ENSMUST00000123154.2	3016	11	1567	17	1567	-14	3prime_fragment	FALSE	canonical	2	5	junction_1	4.87909372276815	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTAAGAAATGAAAGAT	926	False	NA	NA	False	NA	NA	NA	74667190	74676036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_74667412_74670744_74670820_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
tx.22217	chr1	+	1263	3	ISM	ENSMUSG00000033227.8	ENSMUST00000006716.8	2071	4	10314	373	-233	347	3prime_fragment	FALSE	canonical	1	2	junction_2	2	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGAGGAGGTAGTCCTA	4294	False	NA	NA	False	NA	NA	NA	74821364	74824108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_74821482_74821718_74822054_74823297
tx.22218	chr1	-	1932	7	NIC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-40	-213	intron_retention	FALSE	canonical	3	10	junction_6	9.3526585643988	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGGTTACCTGTGA	NA	False	NA	NA	False	NA	NA	NA	75101884	75006510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_75006928_75007327_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75101779
tx.22219	chr1	-	1509	9	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-42	-213	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	10.6183802907977	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGGTTACCTGTGA	NA	False	NA	NA	False	NA	NA	NA	75101886	75006510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75097876_75097971_75101779
tx.2222	chr10	+	6011	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	-9	0	-7	0	multi-exon	TRUE	canonical	3	115	junction_7	22.4499443206436	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTCTTTTTAAATTAA	NA	False	NA	NA	False	NA	NA	NA	127512925	127536918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
tx.22220	chr1	-	3920	16	ISM	ENSMUSG00000026200.14	ENSMUST00000113623.8	2339	17	1312	-1806	28	695	3prime_fragment	FALSE	canonical	2	6	junction_6	4.27083130081252	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGACATGAAGTGTTTT	6546	False	NA	NA	False	NA	NA	NA	75186110	75174184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024
tx.22221	chr1	+	1958	6	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	167	junction_4	34.5913283931103	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	NA	False	NA	NA	NA	75187508	75190886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75190342_75190457
tx.22222	chr1	+	5208	3	FSM	ENSMUSG00000026150.15	ENSMUST00000162794.2	607	3	-4097	-504	848	0	multi-exon	FALSE	canonical	3	223	junction_1	152.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	1611	False	NA	NA	False	NA	NA	NA	82720546	82730111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_82724864_82728240_82728326_82729305
tx.22223	chr1	+	864	4	FSM	ENSMUSG00000073633.10	ENSMUST00000139562.8	881	4	17	0	17	0	multi-exon	FALSE	canonical	3	8	junction_1	23.5843639350783	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCTGGTTTGTAAT	4261	False	NA	NA	False	NA	NA	NA	84844173	84878208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_84844265_84858812_84858922_84874210_84874384_84877717
tx.22224	chr1	+	2992	2	FSM	ENSMUSG00000079445.4	ENSMUST00000188695.2	1523	2	-21	-1448	-21	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAATTAGCTGCTTCC	NA	False	NA	NA	False	NA	NA	NA	86231231	86235019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_86231971_86232766
tx.22225	chr1	+	2564	11	FSM	ENSMUSG00000036500.5	ENSMUST00000044878.4	1680	11	-70	-814	-35	814	multi-exon	TRUE	canonical	0	0	junction_2	0.894427190999916	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCAATAGTCATTTTCT	NA	False	NA	NA	False	NA	NA	NA	87052659	87056448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87052797_87052879_87052997_87053113_87053230_87053348_87053524_87053601_87053775_87054031_87054167_87054247_87054321_87054449_87054585_87054657_87054850_87055051_87055166_87055251
tx.22226	chr1	-	2881	18	FSM	ENSMUSG00000026247.14	ENSMUST00000160810.2	2898	18	24	-7	24	0	multi-exon	FALSE	canonical	2	4	junction_8	3.05089470115057	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCCTCCAGACAAGT	6064	False	NA	NA	False	NA	NA	NA	87083863	87075376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_87075809_87075947_87076025_87076346_87076443_87076855_87076922_87077217_87077343_87077505_87077574_87078198_87078251_87078327_87078387_87078621_87078726_87078856_87078932_87079170_87079270_87079704_87079928_87080540_87080666_87080841_87080935_87081022_87081134_87081239_87081309_87081925_87082811_87083741
tx.22227	chr1	+	2963	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174846.8	995	4	26	-1994	-5	-68	multi-exon	FALSE	canonical	3	15	junction_3	89.5408038581046	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTTTTCAGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	87254745	87285438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282692
tx.22228	chr1	+	3619	4	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-64	11780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.657891697365	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGTGTGTGTGCGT	NA	False	NA	NA	False	NA	NA	NA	88387340	88405060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_88387678_88397558_88397777_88398642_88398830_88402183
tx.22229	chr1	+	3040	16	FSM	ENSMUSG00000026303.7	ENSMUST00000027528.7	4499	16	-18	1477	-18	-1477	multi-exon	FALSE	canonical	0	0	junction_5	0.718021974284601	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCAGGAAATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	90842788	90877387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_90842976_90849566_90849701_90855704_90855927_90856044_90856158_90857811_90857916_90859215_90859339_90861038_90861244_90863034_90863175_90865375_90865460_90867080_90867234_90867441_90867598_90869409_90869503_90870593_90870681_90871416_90871472_90873335_90873437_90876304
tx.2223	chr10	+	5843	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	43.8461443572864	47	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTCTTTTTAAATTAA	NA	False	NA	NA	False	NA	NA	NA	127512947	127536918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
tx.22230	chr1	+	3602	9	NIC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.5951045123867	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTACTGGTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	90926459	91045036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
tx.22231	chr1	+	5525	3	ISM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	6212	5	5846	-5	3prime_fragment	FALSE	canonical	3	28	junction_2	2	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGTGTCTGGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	91474647	91487306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_91474953_91479775_91480162_91482472
tx.22232	chr1	-	4775	26	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	9	571	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	29.6863605044472	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAAGCTAAGAAACTTGA	6607	False	NA	NA	False	NA	NA	NA	92108010	91859907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91957676_91957919_91982622_91982695_92075977_92076217_92107723
tx.22233	chr1	-	4135	27	FSM	ENSMUSG00000026313.17	ENSMUST00000097644.9	8100	27	12	3953	12	25	multi-exon	FALSE	canonical	3	12	junction_26	29.6698799314714	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6566	False	NA	NA	False	NA	NA	NA	92108051	91860453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
tx.22234	chr1	+	1310	2	FSM	ENSMUSG00000047067.8	ENSMUST00000060913.8	1314	2	4	0	4	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGAGTTGCTCTTTATG	2859	False	NA	NA	False	NA	NA	NA	92834706	92836157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_92835146_92835286
tx.22235	chr1	+	4345	8	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	52	1	10	-1	intron_retention	FALSE	canonical	3	45	junction_1	8.7084289452161	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACTTTAGTCTCTGT	6709	False	NA	NA	False	NA	NA	NA	92838556	92848562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739
tx.22236	chr1	+	3550	2	NIC	ENSMUSG00000097814.6	novel	410	3	NA	NA	11	2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATCTCTATTATTTCA	NA	False	NA	NA	False	NA	NA	NA	96799968	96808961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_96800116_96805558
tx.22237	chr1	+	3734	3	FSM	ENSMUSG00000097814.6	ENSMUST00000202118.2	410	3	11	-3335	11	2	multi-exon	FALSE	canonical	3	11	junction_1	4.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATCTCTATTATTTCA	NA	False	NA	NA	False	NA	NA	NA	96799968	96808961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_96800116_96800209_96800394_96805558
tx.22238	chr1	-	2750	3	FSM	ENSMUSG00000044768.17	ENSMUST00000142234.2	639	3	-81	-2030	-81	-2	multi-exon	FALSE	canonical	1	1	junction_2	29.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTGTTTCGTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	97589482	97571629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_97574087_97582324_97582415_97589279
tx.22239	chr1	-	3240	3	FSM	ENSMUSG00000044768.17	ENSMUST00000153115.8	3495	3	255	0	255	0	multi-exon	FALSE	canonical	0	0	junction_2	30	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCGTGGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	97589146	97571627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_97574087_97582324_97582415_97588455
tx.2224	chr10	+	3042	24	ISM	ENSMUSG00000025401.10	ENSMUST00000079590.7	3439	27	1634	2	1634	-2	3prime_fragment	FALSE	canonical	2	6	junction_6	3.36837286056462	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATGCGTATTTATTTC	NA	False	NA	NA	False	NA	NA	NA	127542672	127556807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_127542794_127542995_127543043_127543222_127543287_127543486_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
tx.22240	chr1	-	2642	2	FSM	ENSMUSG00000044768.17	ENSMUST00000149927.2	2703	2	62	-1	62	1	multi-exon	FALSE	canonical	3	9	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTCGTGGTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	97589737	97571626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_97574087_97589555
tx.22241	chr1	+	1096	4	FSM	ENSMUSG00000026321.9	ENSMUST00000187812.2	1041	4	-52	-3	-20	3	multi-exon	FALSE	canonical	3	7	junction_1	0.471404520791032	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGGCTTGGTTTTTTTG	7016	False	NA	NA	False	NA	NA	NA	105708422	105742131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_105708555_105735867_105735950_105737054_105737181_105741375
tx.22242	chr1	+	5012	10	FSM	ENSMUSG00000026321.9	ENSMUST00000027559.9	5029	10	-19	36	-19	-36	multi-exon	FALSE	canonical	1	2	junction_5	2.39340658094867	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGATTATTAAAACTTT	7017	False	NA	NA	False	NA	NA	NA	105708423	105775673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_105708555_105735867_105735950_105737054_105737181_105741375_105741520_105745393_105745488_105747594_105747690_105749202_105749317_105752724_105752778_105754715_105755461_105772245
tx.22243	chr1	+	6522	12	NIC	ENSMUSG00000038866.16	novel	6368	13	NA	NA	39	-18	intron_retention	FALSE	canonical	3	10	junction_3	19.1988291654026	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	105918174	105961779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
tx.22244	chr1	+	4326	15	ISM	ENSMUSG00000044340.8	ENSMUST00000061047.7	6226	17	115239	7	5566	-7	3prime_fragment	FALSE	canonical	3	23	junction_7	5.91435472699556	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATCTATCTGCTTTT	289	False	NA	NA	False	NA	NA	NA	106214720	106321973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106308047_106308153_106314056_106314252_106317403_106317633_106319858
tx.22245	chr1	+	6771	35	NIC	ENSMUSG00000064302.14	novel	7207	37	NA	NA	51	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	43.8377888368449	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTTGAGTTTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	118347504	118537190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
tx.22246	chr1	+	2212	2	Antisense	novelGene_ENSMUSG00000048402.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGACTCAGCTTCATTCT	NA	False	NA	NA	False	NA	NA	NA	118913341	118916547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr1_+_118913546_118914539
tx.22247	chr1	+	1702	2	FSM	ENSMUSG00000098923.2	ENSMUST00000183607.2	681	2	-24	-997	-11	-757	multi-exon	FALSE	canonical	2	5	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTGTGAAGATATGT	NA	False	NA	NA	False	NA	NA	NA	119453878	119455956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_119454278_119454653
tx.22248	chr1	-	6459	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-16	4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	19.1973938480085	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTATGAGCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	119576682	119472762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_119476926_119477616_119477745_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
tx.22249	chr1	-	3251	17	ISM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-16	32294	-16	806	5prime_fragment	FALSE	canonical	3	78	junction_15	8.83087623059003	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTTTCCATTACTGTTT	NA	False	NA	NA	False	NA	NA	NA	119576682	119505060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
tx.2225	chr10	+	712	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	-47	0	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_5	3.96988664825584	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGATGCAATAGGCTG	NA	False	NA	NA	False	NA	NA	NA	127563668	127567637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
tx.22250	chr1	+	507	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	-21	2	-13	-2	multi-exon	FALSE	canonical	3	34	junction_1	7.2773621594641	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTGATTTATCTC	NA	False	NA	NA	False	NA	NA	NA	120048903	120115917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
tx.22251	chr1	-	2831	5	ISM	ENSMUSG00000026389.17	ENSMUST00000112643.2	2873	6	2458	-239	176	9	3prime_fragment	FALSE	canonical	3	10	junction_4	16.3554272337961	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAAATTGTCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	120197977	120154143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197854
tx.22252	chr1	+	7308	25	NNC	ENSMUSG00000026339.19	novel	3040	4	NA	NA	-11305	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	21.6810449087062	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTTTCATTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	121347472	121434187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_121347575_121356627_121356771_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
tx.22253	chr1	-	1912	8	FSM	ENSMUSG00000026347.14	ENSMUST00000185560.2	3488	8	1577	-1	50	1	multi-exon	FALSE	canonical	2	4	junction_7	2.65729646253404	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGAATCTGCATATCTCT	NA	False	NA	NA	False	NA	NA	NA	127605708	127418633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_127419398_127423454_127423597_127427920_127428033_127447081_127447179_127479062_127479155_127480497_127480542_127596387_127596508_127605167
tx.22254	chr1	-	1798	2	FSM	ENSMUSG00000045382.7	ENSMUST00000052172.7	1805	2	7	0	7	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTGTGCTATGTCA	NA	False	NA	NA	False	NA	NA	NA	128520020	128515935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_128517639_128519925
tx.22255	chr1	-	3537	9	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	50	junction_8	9.9373034571759	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTGTCTCCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	130390478	130366764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_130368117_130375355_130375377_130376064_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
tx.22256	chr1	-	7327	15	FSM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	-67	-4411	-31	-1245	multi-exon	FALSE	canonical	3	18	junction_5	4.50679758695639	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTGGAAGGCTTCTGG	3888	False	NA	NA	False	NA	NA	NA	130643582	130619996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
tx.22257	chr1	+	1233	6	NNC	ENSMUSG00000026433.14	novel	1226	6	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	36.3174888999777	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGGGTTGTGATGC	NA	False	NA	NA	False	NA	NA	NA	131794991	131800621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_131795174_131795256_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
tx.22258	chr1	+	4462	5	FSM	ENSMUSG00000026436.16	ENSMUST00000086556.12	4433	5	-29	0	-29	0	multi-exon	FALSE	canonical	3	11	junction_4	2.9474565306379	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTTTCAGTGACTTCT	14	False	NA	NA	False	NA	NA	NA	131935315	131954186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131935679_131942120_131942337_131945330_131946201_131947087_131947205_131951290
tx.22259	chr1	-	3768	10	FSM	ENSMUSG00000059149.18	ENSMUST00000159038.8	1957	10	-82	-1729	-28	0	multi-exon	FALSE	canonical	0	0	junction_6	2.87174399629335	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTGTGTTATCCATCT	NA	False	NA	NA	False	NA	NA	NA	131995731	131964521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_131966712_131968277_131968399_131969595_131969667_131974043_131974192_131980117_131980292_131981286_131981403_131981796_131981963_131985453_131985706_131986897_131987097_131995400
tx.2226	chr10	+	3298	2	FSM	ENSMUSG00000044617.9	ENSMUST00000054287.9	5960	2	-38	2700	-38	-2700	multi-exon	FALSE	canonical	2	5	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTGTGCATTCTGACT	NA	False	NA	NA	False	NA	NA	NA	127575368	127580518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127575532_127577383
tx.22261	chr1	-	7026	11	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_6	112.364629666101	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	NA	False	NA	NA	NA	132953104	132913957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
tx.22262	chr1	+	7947	33	FSM	ENSMUSG00000026447.18	ENSMUST00000077730.7	7928	33	-19	0	-19	0	multi-exon	FALSE	canonical	1	8	junction_4	3.18795952569979	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCTATCATTATTAAAG	NA	False	NA	NA	False	NA	NA	NA	132973730	133036425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_132974162_132993949_132994968_132998055_132998157_132998911_132999067_132999339_132999461_133002248_133002361_133002516_133002597_133003548_133003613_133005063_133005211_133005956_133005991_133007381_133007578_133008698_133008822_133012555_133012724_133013238_133013351_133014674_133014818_133015925_133016115_133017703_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710
tx.22263	chr1	+	5237	2	FSM	ENSMUSG00000041757.18	ENSMUST00000190208.2	3002	2	-2234	-1	-2234	1	multi-exon	FALSE	canonical	3	14	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCCTTAATATATGTTT	410	False	NA	NA	False	NA	NA	NA	133223454	133229356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_133226782_133227446
tx.22264	chr1	+	1674	10	FSM	ENSMUSG00000064246.11	ENSMUST00000082060.10	1687	10	15	-2	15	2	multi-exon	FALSE	canonical	1	1	junction_5	1.61780219761789	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGTGCTATAATTGCGGC	817	False	NA	NA	False	NA	NA	NA	134110156	134117769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134110291_134110517_134110548_134111234_134111440_134111861_134111919_134112886_134113038_134114242_134114365_134115607_134115732_134116232_134116416_134116934_134117052_134117218
tx.22265	chr1	-	4823	22	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	257	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_1	14.4984165215603	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGTGTCAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	134254747	134224521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_134226567_134226763_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
tx.22266	chr1	-	4572	20	NIC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	304	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_16	12.965755023295	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGGTGTCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	134254700	134224522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134251816_134251949_134252248_134252333_134254221_134254357_134254553
tx.22267	chr1	+	159	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAATAATAAATTTAAA	8104	False	NA	NA	False	NA	NA	NA	134284709	134284868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_+_134284700_134284900
tx.22268	chr1	-	2917	2	Antisense	novelGene_ENSMUSG00000042229.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	1	1	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAACTAGGATTACAGA	NA	False	NA	NA	False	NA	NA	NA	134437641	134434524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr1_-_134436513_134436712
tx.22269	chr1	+	3351	10	FSM	ENSMUSG00000031506.12	ENSMUST00000187985.7	1990	10	-67	-1294	-67	11	multi-exon	FALSE	canonical	1	1	junction_1	2.23330569358242	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTTTCCATCATTTTA	NA	False	NA	NA	False	NA	NA	NA	135060370	135073066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_135060516_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135063914_135065061_135065200_135065505_135065617_135066861_135067017_135069680_135069795_135070898
tx.2227	chr10	+	1555	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	21	7	-3	-3	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	487	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTGATGTGCTCGGT	1005	False	NA	NA	False	NA	NA	NA	127851061	127865899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
tx.22270	chr1	-	4415	23	NIC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	518	junction_14	36.4385875296646	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	NA	False	NA	NA	NA	135358205	135312212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
tx.22271	chr1	-	10269	32	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-243	502	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	20.5943426962992	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGACCTGATGTCTGTGC	NA	False	NA	NA	False	NA	NA	NA	135616086	135366083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
tx.22272	chr1	-	7534	24	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-4768	492	combination_of_known_junctions	FALSE	canonical	3	42	junction_19	13.6819116717778	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCTGCTAAGGGACCTG	NA	False	NA	NA	False	NA	NA	NA	135400179	135366093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896
tx.22273	chr1	-	3461	19	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	1655	-1990	combination_of_known_junctions	FALSE	canonical	3	46	junction_17	13.2391348417495	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTCTATTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	135393756	135368575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576
tx.22274	chr1	+	2963	17	ISM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	-13	19489	-13	-6321	5prime_fragment	FALSE	canonical	3	43	junction_3	8.82113938218868	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCTGTGAGAAATGGCT	6161	False	NA	NA	False	NA	NA	NA	136059113	136086247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018
tx.22275	chr1	+	2530	14	ISM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	13	23573	13	4432	5prime_fragment	FALSE	canonical	3	43	junction_3	9.2946507489189	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTTCTCTGCTACTTT	6187	False	NA	NA	False	NA	NA	NA	136059139	136082163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841
tx.22276	chr1	-	3556	10	NNC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	477	8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	16.431676725155	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTGTGTGTGCTGAG	NA	False	NA	NA	False	NA	NA	NA	136161380	136141260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136160458
tx.22277	chr1	+	1900	2	FSM	ENSMUSG00000026404.13	ENSMUST00000129218.7	1364	2	24	-560	24	560	multi-exon	FALSE	canonical	3	59	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCACAAATACTGAATG	NA	False	NA	NA	False	NA	NA	NA	136343032	136346090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_136343162_136344319
tx.22278	chr1	-	5335	8	ISM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	642	-2892	642	0	3prime_fragment	FALSE	canonical	3	37	junction_7	9.80420567815628	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAAATCCTTTATGTT	NA	False	NA	NA	False	NA	NA	NA	136880726	136770308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839
tx.22279	chr1	-	4822	9	NNC	ENSMUSG00000026398.15	novel	4733	9	NA	NA	1928	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	19.824227601599	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAACTTTTTAAATCC	NA	False	NA	NA	False	NA	NA	NA	136886190	136770316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136885871
tx.2228	chr10	+	853	8	FSM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	32	0	-28	0	multi-exon	FALSE	canonical	3	9741	junction_1	845.476607528293	3348	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGGTGCTAGATCTT	4944	False	NA	NA	False	NA	NA	NA	127871475	127884502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
tx.22280	chr1	-	4065	8	FSM	ENSMUSG00000026393.11	ENSMUST00000027642.5	3737	8	-56	-272	19	-3	multi-exon	TRUE	canonical	2	8	junction_1	49.1424418587104	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGGGATGATCATCG	NA	False	NA	NA	False	NA	NA	NA	138547468	138411577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_138414849_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
tx.22281	chr1	-	513	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	11	41	6	9	multi-exon	FALSE	canonical	3	59	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTGAACAGAGTTAAT	NA	False	NA	NA	False	NA	NA	NA	138784579	138779761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_138779912_138781308_138781411_138784318
tx.22282	chr1	+	6981	11	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	-22	-1574	intron_retention	FALSE	canonical	2	5	junction_1	15.9762323468332	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTCTGAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	139350097	139379169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_139350334_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
tx.22283	chr1	-	2605	18	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	79	-1612	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	114.285958353669	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGTAGTGATTTTTAC	NA	False	NA	NA	False	NA	NA	NA	143578552	143483510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143550897_143550969_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
tx.22284	chr1	+	2968	7	ISM	ENSMUSG00000026483.14	ENSMUST00000086267.6	3245	10	18958	-10	18958	10	3prime_fragment	FALSE	canonical	3	182	junction_5	18.2361058221199	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTAGAAATTGTTTGA	389	False	NA	NA	False	NA	NA	NA	151571875	151595103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
tx.22285	chr1	-	2334	7	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	-4596	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.5570794973519	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGAGTTTCTGATTTTA	NA	False	NA	NA	False	NA	NA	NA	153007576	152998503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007492
tx.22286	chr1	-	4614	28	FSM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	-55	2	-3	-2	multi-exon	TRUE	canonical	3	12	junction_24	37.4089841985242	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	NA	False	NA	NA	NA	153363409	153331505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354725_153356877_153356996_153358487_153358629_153359485_153359619_153363278
tx.22287	chr1	-	3345	12	FSM	ENSMUSG00000033684.15	ENSMUST00000035325.15	3348	12	2	1	2	0	multi-exon	FALSE	canonical	3	21	junction_6	6.25887799202127	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGTTTGACTTGATC	NA	False	NA	NA	False	NA	NA	NA	155688633	155653904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
tx.22288	chr1	-	5513	5	ISM	ENSMUSG00000033671.19	ENSMUST00000138762.8	13307	38	110534	0	-1348	0	3prime_fragment	TRUE	canonical	3	19	junction_4	2.95803989154981	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCGGTGTAAATT	3663	False	NA	NA	False	NA	NA	NA	155738467	155720709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_155724474_155733768_155733892_155735914_155736062_155736181_155736587_155737393
tx.22289	chr1	+	5220	5	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	-8	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	18.6882315910308	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGGGTGTGCGGTTGT	NA	False	NA	NA	False	NA	NA	NA	155911463	155944602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_155911667_155935156_155935334_155937333_155937916_155939338_155939441_155940446
tx.2229	chr10	+	1962	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	20	18	20	-18	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	3909	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTCACTCCTGAATT	866	False	NA	NA	False	NA	NA	NA	127894842	127913123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
tx.22290	chr1	-	3729	18	FSM	ENSMUSG00000060985.16	ENSMUST00000121146.10	3759	18	30	0	-28	0	multi-exon	TRUE	canonical	2	2	junction_17	4.02242846994794	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTGATCTATATTTA	NA	False	NA	NA	False	NA	NA	NA	156131204	156082865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129083_156129477_156129936_156130173_156130880
tx.22291	chr1	-	3418	18	NIC	ENSMUSG00000060985.16	novel	3210	18	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	4.86211254582866	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAATTGTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	156131187	156082874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128307_156129314_156129477_156129936_156130173_156130880
tx.22292	chr1	-	4221	15	NIC	ENSMUSG00000026600.13	novel	8371	16	NA	NA	8	1311	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	20.8683922696112	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTTCCAAGCTGGT	1774	False	NA	NA	False	NA	NA	NA	156301826	156256051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156301717
tx.22293	chr1	-	3044	4	ISM	ENSMUSG00000060519.12	ENSMUST00000156861.8	3545	6	4546	-4	-3049	4	3prime_fragment	FALSE	canonical	3	47	junction_2	7.36357401145817	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTTCTTCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	156497349	156481182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940
tx.22294	chr1	-	6813	19	NIC	ENSMUSG00000026594.15	novel	2958	20	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	2	13	junction_18	61.6571814527015	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATAGATTGTGTGGG	NA	False	NA	NA	False	NA	NA	NA	156767162	156631742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735289_156767058
tx.22295	chr1	+	2942	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-131	339	combination_of_known_junctions	TRUE	canonical	3	13	junction_2	90.9490428485189	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAATGTACTGGTGAGT	NA	False	NA	NA	False	NA	NA	NA	159059758	159173009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_159060421_159067131_159067192_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
tx.22296	chr1	-	8436	26	NIC	ENSMUSG00000026721.17	novel	6338	9	NA	NA	7	0	intron_retention	FALSE	canonical	1	4	junction_7	11.2214081112844	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTCTAATTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	160620501	160046743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568502_160620305
tx.22297	chr1	+	4555	4	ISM	ENSMUSG00000026708.17	ENSMUST00000143486.7	1997	5	-24	3	-8	1	intron_retention	FALSE	canonical	3	21	junction_2	48.0832611206852	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCTGGTCTTGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	160898511	160914291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_160898927_160902326_160902501_160905898_160906051_160910477
tx.22298	chr1	+	1471	2	FSM	ENSMUSG00000026698.9	ENSMUST00000111594.3	3290	2	9	1810	7	-705	multi-exon	FALSE	canonical	3	13	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTGTCTAGTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	161796763	161799194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_161796849_161797808
tx.22299	chr1	-	3331	6	ISM	ENSMUSG00000026694.20	ENSMUST00000159817.9	2482	8	2595	-8	600	8	3prime_fragment	FALSE	canonical	3	74	junction_5	13.1666244725062	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTATCTCAAGTATT	NA	False	NA	NA	False	NA	NA	NA	162373496	162361239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754
tx.223	chr1	-	3962	6	FSM	ENSMUSG00000041945.13	ENSMUST00000039672.6	3160	6	-20	-782	4	782	multi-exon	FALSE	canonical	3	9	junction_2	1.46969384566991	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTTTAAAACAGAATAT	NA	False	NA	NA	False	NA	NA	NA	40829843	40810415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829644
tx.2230	chr10	-	3155	2	Antisense	novelGene_ENSMUSG00000118550.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGTGGTGGTGCACG	NA	False	NA	NA	False	NA	NA	NA	128058873	127897189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_-_127900272_128058800
tx.22300	chr1	+	3971	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	253	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.4268725555803	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTACAATTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	163757626	163782681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779595_163780186_163780950
tx.22301	chr1	+	2367	4	NNC	ENSMUSG00000104011.2	novel	540	3	NA	NA	-3967	495	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	3.29983164553722	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGACTGTGTTGTGTCGT	7929	False	NA	NA	False	NA	NA	NA	164286043	164292053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_164287310_164289944_164290168_164290325_164290407_164291256
tx.22302	chr1	-	5429	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	36	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9019954019753	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTAGTGTTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	165021971	165001909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_165004858_165004923_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
tx.22303	chr1	-	5171	2	ISM	ENSMUSG00000026564.10	ENSMUST00000085992.4	4018	6	19741	-1754	19741	1749	3prime_fragment	FALSE	canonical	3	49	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTGTACTCAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	165935724	165923967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_165928956_165935541
tx.22304	chr1	-	6122	6	FSM	ENSMUSG00000040596.16	ENSMUST00000128861.3	4848	6	26	-1300	-9	528	multi-exon	FALSE	canonical	0	0	junction_2	0.8	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATAGGCTCTGGTGATTT	1337	False	NA	NA	False	NA	NA	NA	166237406	166222437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_166227735_166229434_166229534_166231066_166231194_166235967_166236102_166236566_166236901_166237275
tx.22305	chr1	+	3130	6	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	5420	-249	intron_retention	FALSE	canonical	3	666	junction_1	28.555910071297	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	167183300	167195852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
tx.22307	chr1	-	6026	7	ISM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	68025	3	-5375	-3	3prime_fragment	FALSE	canonical	3	53	junction_3	14.3459247020035	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGTCTGTACAAAG	NA	False	NA	NA	False	NA	NA	NA	170627315	170532245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182
tx.22308	chr1	-	7597	17	NNC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	-871	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	19.1861766644634	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGTCTGTACAAAG	NA	False	NA	NA	False	NA	NA	NA	170696211	170532245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218_170695445_170695961
tx.22309	chr1	-	4856	17	NNC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	-853	-2723	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	22.7986259180241	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGGTTAACTTCGCT	NA	False	NA	NA	False	NA	NA	NA	170696193	170534965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_170537657_170574674_170574760_170614914_170615027_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218_170695445_170695961
tx.2231	chr10	+	1763	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	35	118	2	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	9394	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	NA	False	NA	NA	NA	127919176	127926142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
tx.22310	chr1	-	1472	7	FSM	ENSMUSG00000026656.16	ENSMUST00000081103.12	1462	7	-19	9	-19	-9	multi-exon	FALSE	canonical	3	21	junction_6	22.7943706500823	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACCATCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	170803715	170788135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469
tx.22312	chr1	+	3047	8	FSM	ENSMUSG00000006403.14	ENSMUST00000111314.2	3761	8	262	452	262	-451	multi-exon	FALSE	canonical	2	2	junction_1	2.0995626366713	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAGTCAACAAGAACATG	NA	False	NA	NA	False	NA	NA	NA	171079946	171087754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_171080430_171080655_171080789_171081461_171081633_171083716_171084004_171084096_171084284_171084523_171084700_171085287_171085464_171086320
tx.22313	chr1	+	3636	5	NIC	ENSMUSG00000052423.16	novel	2805	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	209	junction_1	11.0764389584379	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTGATTTCTGC	NA	False	NA	NA	False	NA	NA	NA	171097898	171104467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
tx.22314	chr1	+	3112	6	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	204	junction_1	13.1848397790796	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGTGATTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	171097904	171104468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
tx.22315	chr1	+	1871	8	NIC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	74.0904025842892	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	171097904	171104469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_171097985_171098772_171098944_171099397_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
tx.22316	chr1	+	2784	5	ISM	ENSMUSG00000013973.13	ENSMUST00000111299.8	2322	6	602	643	-85	0	3prime_fragment	FALSE	canonical	3	134	junction_1	47.1937495861475	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	2048	False	NA	NA	False	NA	NA	NA	171157568	171169250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
tx.22317	chr1	-	3667	5	FSM	ENSMUSG00000013997.11	ENSMUST00000141357.2	2932	5	17	-752	2	-6	multi-exon	FALSE	canonical	3	137	junction_3	5.87367006223537	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTCTGTCTTGACTT	901	False	NA	NA	False	NA	NA	NA	171173191	171168144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171172108_171172481
tx.22318	chr1	-	3025	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	1	15	0	-15	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTTACTTTAATTCTG	879	False	NA	NA	False	NA	NA	NA	171173213	171168153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
tx.22319	chr1	-	1520	3	ISM	ENSMUSG00000045259.5	ENSMUST00000061878.5	1558	4	-2	273	-2	-273	intron_retention	FALSE	canonical	3	17	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTTTTGTCTCTGAATC	7869	False	NA	NA	False	NA	NA	NA	171188368	171186286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_171186549_171187022_171187222_171187309
tx.2232	chr10	+	8408	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	489	0	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	79.9461553490976	226	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	127932737	127965172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
tx.22320	chr1	-	1308	4	FSM	ENSMUSG00000045259.5	ENSMUST00000061878.5	1558	4	-22	272	-22	-272	multi-exon	FALSE	canonical	3	17	junction_1	1.88561808316413	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTGTCTCTGAATCC	7849	False	NA	NA	False	NA	NA	NA	171188388	171186285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_171186549_171187022_171187222_171187309_171187470_171187702
tx.22321	chr1	-	3608	11	ISM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	13388	797	-8198	-797	3prime_fragment	FALSE	canonical	3	125	junction_8	18.6282044223269	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAGAGAAACTGCTCC	NA	False	NA	NA	False	NA	NA	NA	172112243	172100072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066
tx.22322	chr1	+	4128	21	FSM	ENSMUSG00000037995.16	ENSMUST00000052629.13	4133	21	5	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	2.95127091267474	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCACCTCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	172309786	172326444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_172309828_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
tx.22323	chr1	+	6427	18	FSM	ENSMUSG00000028354.14	ENSMUST00000030039.13	6442	18	13	2	13	-2	multi-exon	TRUE	canonical	1	3	junction_6	3.5625891599357	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTGTCAGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	174329403	174650293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_174331158_174364610_174364778_174409481_174409630_174420626_174420683_174435947_174437519_174440072_174440218_174474671_174474760_174494208_174494271_174521752_174521845_174521997_174522128_174523151_174523299_174526334_174526395_174527121_174527243_174547410_174547504_174571820_174571873_174618823_174618974_174647519_174647602_174648784
tx.22324	chr1	-	1992	15	ISM	ENSMUSG00000026527.14	ENSMUST00000027812.11	1418	16	220215	-650	-184735	1	3prime_fragment	FALSE	canonical	0	0	junction_4	0.622699849077239	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGGAACTTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	175098481	174886651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_174887361_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369_174921445_174949293_174949376_174949460_174949538_174950496_174950562_174977217_174977270_174980689_174980797_175016742_175016794_175098382
tx.22325	chr1	-	414	2	ISM	ENSMUSG00000026527.14	ENSMUST00000192227.6	2113	17	-160	431836	-50	-415785	5prime_fragment	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATTCTTCACTTCCC	NA	False	NA	NA	False	NA	NA	NA	175320116	175318618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_175318743_175319826
tx.22326	chr1	+	2725	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-16	3	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	116.815132358479	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGGAAGTTTAAATGCTA	9750	False	NA	NA	False	NA	NA	NA	175708343	175736301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
tx.22327	chr1	+	5463	2	FSM	ENSMUSG00000063659.12	ENSMUST00000094276.5	4204	2	-1263	4	-184	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCCTTGTGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	177270597	177278326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_177272389_177274654
tx.22328	chr1	+	3889	4	NIC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	134	1694	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.3146529162199	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTATAGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	178015231	178080161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_178015524_178070177_178070272_178071906_178072049_178076800
tx.2233	chr10	+	8395	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	499	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_26	93.9192214249097	29	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	127932747	127965172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
tx.22330	chr1	+	7372	27	ISM	ENSMUSG00000026490.19	ENSMUST00000097450.10	5160	36	111234	-3434	-12139	-2	3prime_fragment	FALSE	canonical	3	53	junction_2	12.6846130521993	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATTGAGTATTCTATT	NA	False	NA	NA	False	NA	NA	NA	179899908	179993165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
tx.22332	chr1	-	2405	2	FSM	ENSMUSG00000026497.8	ENSMUST00000027778.8	2294	2	-122	11	-122	-11	multi-exon	FALSE	canonical	2	5	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	180524721	180520618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_180522487_180524184
tx.22333	chr1	-	3216	2	FSM	ENSMUSG00000103156.2	ENSMUST00000193209.2	600	2	50	-2666	50	2666	multi-exon	FALSE	canonical	1	1	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180596171	180588395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_180591486_180596045
tx.22334	chr1	+	3208	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	40	-18	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	1057.26330093312	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTGAATAACAAATTAATC	NA	False	NA	NA	False	NA	NA	NA	180978535	180996541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_180978627_180979027_180979095_180983423_180983537_180989639_180989781_180993745
tx.22335	chr1	+	7947	3	FSM	ENSMUSG00000062169.14	ENSMUST00000111057.2	562	3	-4742	-2643	47	-2	multi-exon	FALSE	canonical	3	2115	junction_1	7.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGATTGTTCTATTGCT	NA	False	NA	NA	False	NA	NA	NA	180978542	180996557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_180983537_180989639_180989781_180993745
tx.22336	chr1	-	6974	14	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	43.947251867956	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATTCTCGTTGCGTTCC	NA	False	NA	NA	False	NA	NA	NA	181039541	181000795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025279_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
tx.22337	chr1	+	3400	2	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGCTTGGGCCTGTTCC	NA	False	NA	NA	False	NA	NA	NA	181112613	181116116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_+_181113275_181113377
tx.22338	chr1	-	5739	14	FSM	ENSMUSG00000022995.17	ENSMUST00000195059.6	2832	14	-333	-2574	-4	1461	multi-exon	FALSE	canonical	2	7	junction_9	106.013787202057	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATGGTCTTCTGCAATG	5629	False	NA	NA	False	NA	NA	NA	181847559	181730503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181750066_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
tx.22339	chr1	+	1188	2	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCTGTACGTGTGTGT	2285	False	NA	NA	False	NA	NA	NA	181856057	181857627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_+_181856461_181856842
tx.2234	chr10	+	8037	27	ISM	ENSMUSG00000040054.18	ENSMUST00000045621.9	8369	30	18007	6	14410	-5	3prime_fragment	FALSE	canonical	3	275	junction_1	79.5116473921017	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	NA	False	NA	NA	NA	127946658	127965166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
tx.22340	chr1	-	2394	3	ISM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	16022	4	5232	-2	3prime_fragment	FALSE	canonical	3	140	junction_1	2	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCGCTGGATTTAT	NA	False	NA	NA	False	NA	NA	NA	183062514	183057919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_183060003_183061033_183061194_183062363
tx.22341	chr1	-	1640	1	ISM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	9653	0	9653	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	1	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGCTGTGCCTTCCCT	7151	False	NA	NA	False	NA	NA	NA	184605762	184604122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_184604100_184605800
tx.22342	chr1	-	4419	3	ISM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	13695	158	13673	-158	3prime_fragment	FALSE	canonical	3	113	junction_2	3	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATAATTTACTGACTT	NA	False	NA	NA	False	NA	NA	NA	185835812	185820085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_185820966_185821640_185821757_185832389
tx.22343	chr1	+	3306	12	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	10545	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6.79936798229642	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTGGATTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	189529413	189584175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_189529873_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
tx.22344	chr1	+	4712	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	2	-466	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	62.9840009446844	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTCATTTATTCCAG	NA	False	NA	NA	False	NA	NA	NA	190661020	190678693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_190662752_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
tx.22345	chr1	+	3261	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	3	-461	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	61.1349685123007	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTATTCCAGTTGTT	NA	False	NA	NA	False	NA	NA	NA	190661021	190678698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_190661297_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
tx.22346	chr1	-	3763	9	FSM	ENSMUSG00000066595.10	ENSMUST00000192666.2	3666	9	-93	-4	64	2	multi-exon	FALSE	canonical	2	3	junction_8	11.3571288184999	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATGTCCTTTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	190758257	190738041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190757573
tx.22347	chr1	-	4196	11	NNC	ENSMUSG00000066595.10	novel	4040	10	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	11.1427106217473	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGTCCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	190758384	190738043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190752632_190752760_190753272_190753454_190757573
tx.22348	chr1	-	2730	2	Antisense	novelGene_ENSMUSG00000062510.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTGGTGCATAAGTGA	NA	False	NA	NA	False	NA	NA	NA	190816756	190813973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr1_-_190815833_190815885
tx.22349	chr1	-	1721	10	FSM	ENSMUSG00000037395.17	ENSMUST00000192491.6	1623	10	-10	-88	-1	88	multi-exon	FALSE	canonical	2	7	junction_1	11.5373788665845	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACACTGGTGTTATATTT	NA	False	NA	NA	False	NA	NA	NA	191822333	191785595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
tx.2235	chr10	-	2618	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-159	-978	-159	-571	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTATTCCCTGGCAGTT	NA	False	NA	NA	False	NA	NA	NA	128012507	127967997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
tx.22350	chr1	+	4106	2	FSM	ENSMUSG00000079144.8	ENSMUST00000193307.2	705	2	-158	-3243	0	6	multi-exon	FALSE	canonical	3	3	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAGCAGTTAATGTGT	967	False	NA	NA	False	NA	NA	NA	192855893	192860146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_192856406_192856552
tx.22351	chr1	-	4028	9	NIC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	1	1141	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	81.0361609098062	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTTTTACACTCAATA	NA	False	NA	NA	False	NA	NA	NA	194813868	194778548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
tx.22352	chr10	+	5460	2	ISM	ENSMUSG00000040624.19	ENSMUST00000154727.2	5405	15	53059	-1	-1246	1	intron_retention	FALSE	canonical	3	27	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTTCATTGAATTAAT	NA	False	NA	NA	False	NA	NA	NA	3906644	3917299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_3908206_3913400
tx.22353	chr10	-	2691	3	FSM	ENSMUSG00000019763.12	ENSMUST00000155172.8	776	3	1	-1916	1	767	multi-exon	FALSE	canonical	3	35	junction_2	63	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTTTCCAATGTCTGT	5756	False	NA	NA	False	NA	NA	NA	4382294	4375326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_4377692_4379076_4379172_4382063
tx.22354	chr10	+	176	2	Antisense	novelGene_ENSMUSG00000019775.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	5766384	5785107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_+_5766544_5785090
tx.22355	chr10	-	5910	4	NIC	ENSMUSG00000079685.11	novel	5959	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	26.1576417557513	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTTCTCTTACTT	NA	False	NA	NA	False	NA	NA	NA	7423588	7390361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_7395698_7396417_7396553_7397380_7397485_7423253
tx.22356	chr10	+	3272	7	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	56	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	99.2068546018873	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTCTTTCTTATA	7321	False	NA	NA	False	NA	NA	NA	7465636	7501239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479987_7480148_7484307_7484404_7499393
tx.22357	chr10	-	4383	4	ISM	ENSMUSG00000015755.17	ENSMUST00000146444.8	4380	7	42560	0	-2184	0	3prime_fragment	FALSE	canonical	3	37	junction_3	7.48331477354788	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATTTTGTGGCTTGTC	3380	False	NA	NA	False	NA	NA	NA	7789434	7781416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151
tx.22358	chr10	+	5323	6	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	37	junction_1	40.8480109674878	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	2927	False	NA	NA	False	NA	NA	NA	12966448	13007436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_12966765_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
tx.22359	chr10	-	2852	11	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-138	7	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	14.8727939540626	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAAAGTCAGGAAACCG	NA	False	NA	NA	False	NA	NA	NA	13350294	13089131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13142716_13142798_13167538_13167707_13349799
tx.2236	chr10	-	5101	14	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-196	2088	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_13	80.9962377678394	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	NA	False	NA	NA	NA	128012544	127965338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128012518
tx.22360	chr10	-	1395	5	FSM	ENSMUSG00000019806.14	ENSMUST00000105534.10	617	5	-163	-615	-5	0	multi-exon	FALSE	canonical	2	6	junction_1	50.8742321809381	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTGCACTGTTCA	NA	False	NA	NA	False	NA	NA	NA	13744729	13522797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_13523451_13566267_13566384_13677591_13677694_13704986_13705143_13744361
tx.22361	chr10	-	3578	6	ISM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	118209	-1973	118168	-6	3prime_fragment	FALSE	canonical	3	93	junction_4	11.6550418274668	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATTATTCAGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	14302571	14278332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479
tx.22362	chr10	-	6822	25	FSM	ENSMUSG00000039116.8	ENSMUST00000041168.6	6507	25	-326	11	-183	-11	multi-exon	FALSE	canonical	2	3	junction_1	30.3030698389894	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCCAAATTATTCAGT	NA	False	NA	NA	False	NA	NA	NA	14421106	14278337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_14281183_14283609_14283656_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
tx.22363	chr10	-	6906	26	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-184	-12	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	26.6923209931246	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTCCAAATTATTCAG	NA	False	NA	NA	False	NA	NA	NA	14421107	14278338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_14281183_14283609_14283656_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
tx.22364	chr10	-	4485	3	ISM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	32082	7	-763	0	3prime_fragment	FALSE	canonical	3	90	junction_1	3.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAACTTTGCATTTTAG	7707	False	NA	NA	False	NA	NA	NA	17791733	17774789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_17778126_17783781_17783937_17790739
tx.22365	chr10	-	2281	2	FSM	ENSMUSG00000059554.13	ENSMUST00000174631.2	480	2	-1708	-93	1571	0	multi-exon	FALSE	canonical	3	62	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTCATCTCTGTTTTCTGT	572	False	NA	NA	False	NA	NA	NA	18093791	18089429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_18089927_18092007
tx.22366	chr10	+	4021	22	NNC	ENSMUSG00000071369.12	novel	5450	30	NA	NA	-461	7452	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	7.60415210603396	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAGAGTCAGTGGATG	NA	False	NA	NA	False	NA	NA	NA	19809756	19988635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19987523_19987545_19988108
tx.22367	chr10	+	6260	5	ISM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	22	1466	22	-1057	intron_retention	FALSE	canonical	3	174	junction_4	7.08431365765238	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAATTATGTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	20223537	20235584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775
tx.22368	chr10	-	3882	16	FSM	ENSMUSG00000019982.16	ENSMUST00000188495.8	3693	16	-188	-1	-109	1	multi-exon	FALSE	canonical	2	3	junction_11	4.59951688284276	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGATGTCTCTCGATTC	NA	False	NA	NA	False	NA	NA	NA	21036992	21000832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21020867_21021225_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
tx.22369	chr10	-	246	2	Antisense	novelGene_ENSMUSG00000050844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGCAAAGTGAAGGTAT	NA	False	NA	NA	False	NA	NA	NA	21494289	21406979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_-_21407175_21494238
tx.2237	chr10	+	2422	18	FSM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	155	-4	-25	1	multi-exon	FALSE	canonical	3	75	junction_3	13.3766309680488	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATATTTTG	NA	False	NA	NA	False	NA	NA	NA	128030480	128045812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
tx.22370	chr10	+	2397	7	FSM	ENSMUSG00000037440.9	ENSMUST00000041416.8	2416	7	15	4	15	-4	multi-exon	FALSE	canonical	0	0	junction_4	1.59861050777091	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGTCTTTGGCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	23770600	23781237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_23770990_23773190_23773322_23774305_23774499_23775291_23775584_23776482_23776842_23779283_23779455_23780375
tx.22371	chr10	-	2255	2	NNC	ENSMUSG00000039166.17	novel	2321	2	NA	NA	8925	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	25067131	25044987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_25047147_25067035
tx.22372	chr10	-	2202	9	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	41.2158949921023	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	25172970	25044987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165518_25165613_25165629_25172825
tx.22373	chr10	-	3605	3	FSM	ENSMUSG00000039166.17_ENSMUSG00002076559.1	ENSMUST00000177124.2	397	3	34	-3242	34	919	multi-exon	FALSE	canonical	3	116	junction_2	4.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATTAGTAAATTATTTC	NA	False	NA	NA	False	NA	NA	NA	25172937	25156578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_25159940_25165496_25165629_25172825
tx.22374	chr10	+	2208	6	FSM	ENSMUSG00000019883.12	ENSMUST00000160399.8	1845	6	19	-382	19	382	multi-exon	FALSE	canonical	3	12	junction_1	32.6643536596088	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAAATCTCACGACCT	NA	False	NA	NA	False	NA	NA	NA	29189180	29221938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_29189294_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
tx.22375	chr10	-	1939	14	NNC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	66.910343616217	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCAGTATTTCTCATGG	NA	False	NA	NA	False	NA	NA	NA	30476689	30410703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30475369_30475489_30476585
tx.22376	chr10	-	1213	7	NNC	ENSMUSG00000000296.9	novel	969	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	231.746568954585	8	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGGATCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31321851	31208372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_31208966_31214180_31214242_31217135_31217175_31222597_31222709_31233867_31234017_31255210_31255327_31321707
tx.22377	chr10	-	2513	6	FSM	ENSMUSG00000019785.15	ENSMUST00000019920.13	2717	6	204	0	54	0	multi-exon	FALSE	canonical	0	0	junction_4	2.82842712474619	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGATGTCATGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	33500561	33388281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_33389343_33404318_33404540_33419377_33419489_33471739_33471915_33498539_33499055_33500131
tx.22378	chr10	+	5991	38	FSM	ENSMUSG00000019846.12	ENSMUST00000019992.6	6046	38	47	8	-8	-8	multi-exon	TRUE	canonical	0	0	junction_6	2.38481928848171	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTCCTATTTCTTATTTG	NA	False	NA	NA	False	NA	NA	NA	38841557	38986176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890_38971081_38973078_38973235_38974322_38974483_38979483_38979615_38981132_38981227_38981957_38982078_38985883
tx.22379	chr10	-	1845	5	NIC	ENSMUSG00000087177.8	novel	503	5	NA	NA	-7	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.32290411644765	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCATATATGTCTGT	5808	False	NA	NA	False	NA	NA	NA	39607852	39497399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_39498724_39508945_39509013_39515559_39515763_39516375_39516508_39607733
tx.2238	chr10	+	1622	10	ISM	ENSMUSG00000044005.14	ENSMUST00000135441.2	1529	11	120	6	120	2	3prime_fragment	FALSE	canonical	3	100	junction_5	5.53774924194538	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATAATTTTTATTTTA	153	False	NA	NA	False	NA	NA	NA	128039752	128045805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
tx.22380	chr10	-	2061	6	NIC	ENSMUSG00000087177.8	novel	503	5	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	5.31413210223457	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGTTTTTTCAGCATA	5660	False	NA	NA	False	NA	NA	NA	39608000	39497408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_39498724_39508945_39509013_39515559_39515763_39516375_39516508_39557468_39557546_39607733
tx.22381	chr10	+	10722	32	FSM	ENSMUSG00000019841.16	ENSMUST00000019986.13	10713	32	-11	2	-11	1	multi-exon	FALSE	canonical	3	30	junction_10	17.5666413596239	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTATGACTTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	39608102	39751205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
tx.22382	chr10	+	5857	14	NNC	ENSMUSG00000038481.14	novel	5807	13	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	12.121182983648	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGCGTGGGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	40225318	40359813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345266_40345333_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
tx.22383	chr10	+	5732	12	FSM	ENSMUSG00000038481.14	ENSMUST00000214659.2	3814	12	-201	-1717	-12	0	multi-exon	FALSE	canonical	1	1	junction_4	10.2900095976953	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	40225320	40359814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
tx.22384	chr10	+	3822	3	FSM	ENSMUSG00000019826.12	ENSMUST00000215881.2	719	3	-1952	-1151	-1032	5	multi-exon	FALSE	canonical	3	58	junction_2	15	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTGATCTTTATCAAAA	NA	False	NA	NA	False	NA	NA	NA	41330174	41341575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_41332612_41338274_41338357_41340272
tx.22385	chr10	-	2197	10	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_9	73.7545144046229	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	73	False	NA	NA	False	NA	NA	NA	41685920	41594836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685783
tx.22386	chr10	-	1127	3	FSM	ENSMUSG00000071324.12	ENSMUST00000162405.8	1135	3	5	3	5	-3	multi-exon	FALSE	canonical	3	5	junction_2	0.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGAGAATCCTGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	41894371	41875806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_41876495_41887763_41888020_41894188
tx.22387	chr10	-	2812	2	Genic_Genomic	ENSMUSG00000085666.4	novel	1194	1	NA	NA	-128	1572	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAAAACTTTTATGATT	2334	False	NA	NA	False	NA	NA	NA	41931430	41928536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr10_-_41931176_41931257
tx.22388	chr10	-	5959	3	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2113	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	63	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCCCAGGAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	42150579	42057840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_42062292_42072461_42073898_42150507
tx.22389	chr10	+	3910	4	FSM	ENSMUSG00000044770.15	ENSMUST00000130511.8	2381	4	494	-2023	-84	13	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCGCCACTTTCTGAAAC	4201	False	NA	NA	False	NA	NA	NA	42810827	42836789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_42811144_42822864_42823138_42831884_42832031_42833614
tx.2239	chr10	-	1581	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	-2	4	-2	-4	multi-exon	FALSE	canonical	3	299	junction_1	0	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACTCTGTCTATAAAA	NA	False	NA	NA	False	NA	NA	NA	128047678	128045780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128047261_128047577
tx.22390	chr10	-	2641	5	ISM	ENSMUSG00000058298.11	ENSMUST00000219838.3	4132	8	7480	606	7000	-606	3prime_fragment	FALSE	canonical	3	32	junction_3	1.78535710713571	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTTTTGTGACAATGG	NA	False	NA	NA	False	NA	NA	NA	53499055	53485539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851
tx.22391	chr10	-	4043	17	NIC	ENSMUSG00000019856.15	novel	4164	18	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	2.2220486043289	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTACTTCCAAGTATAT	4486	False	NA	NA	False	NA	NA	NA	53627203	53509240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_53509812_53511327_53511531_53517040_53517159_53523078_53523226_53523667_53523853_53525197_53525326_53528395_53528550_53531062_53531276_53550661_53550813_53551231_53551354_53553826_53553989_53560331_53560455_53566046_53566245_53570790_53570973_53573219_53573356_53574584_53575440_53626808
tx.22392	chr10	-	4073	18	FSM	ENSMUSG00000019856.15	ENSMUST00000020003.15	4164	18	-130	221	-130	0	multi-exon	FALSE	canonical	1	1	junction_7	2.21976026636626	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCGTGGTTGTTTTC	4340	False	NA	NA	False	NA	NA	NA	53627349	53509461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_53509812_53511327_53511531_53514272_53514378_53517040_53517159_53523078_53523226_53523667_53523853_53525197_53525326_53528395_53528550_53531062_53531276_53550661_53550813_53551231_53551354_53553826_53553989_53560331_53560455_53566046_53566245_53570790_53570973_53573219_53573356_53574584_53575440_53626808
tx.22393	chr10	-	4801	12	ISM	ENSMUSG00000003746.17	ENSMUST00000003843.16	5137	13	590	1	503	-1	3prime_fragment	TRUE	canonical	3	6	junction_11	2.3741027013092	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGTCTTGTCACTGT	6073	False	NA	NA	False	NA	NA	NA	53951302	53780881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_53783660_53784038_53784155_53795253_53795427_53796138_53796359_53801525_53801642_53809587_53809682_53810984_53811109_53853118_53853214_53890510_53890592_53901809_53901926_53906793_53906891_53950511
tx.22394	chr10	+	2151	2	FSM	ENSMUSG00000047669.9	ENSMUST00000063138.8	2140	2	-18	7	-18	-7	multi-exon	FALSE	canonical	2	6	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTTATAAAGCTTC	NA	False	NA	NA	False	NA	NA	NA	55982994	55992969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_55983126_55990949
tx.22395	chr10	+	6627	22	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	175	2	-41	-2	3prime_fragment	FALSE	canonical	3	66	junction_11	11.5301045380168	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCATGACTACTGTTC	NA	False	NA	NA	False	NA	NA	NA	58091493	58141419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
tx.22396	chr10	+	1401	2	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	46051	-543	45778	543	3prime_fragment	FALSE	canonical	3	366	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCCATGACATTTAAAAC	87	False	NA	NA	False	NA	NA	NA	58328794	58330721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_58328959_58329484
tx.22397	chr10	+	2738	8	FSM	ENSMUSG00000020109.14	ENSMUST00000142819.8	1495	8	-20	-1223	-20	-16	multi-exon	FALSE	canonical	3	241	junction_6	22.8937207325413	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCTTTTAAAACTATT	NA	False	NA	NA	False	NA	NA	NA	59715419	59733820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171
tx.22398	chr10	-	1658	3	FSM	ENSMUSG00000020107.11	ENSMUST00000182912.2	566	3	-32	-1060	-7	-10	multi-exon	FALSE	canonical	3	24	junction_2	171	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCTTAATCTCAGGAGT	NA	False	NA	NA	False	NA	NA	NA	59838940	59823240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_59824661_59826654_59826730_59838777
tx.22399	chr10	-	196	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATGCTTCATATCTTA	8877	False	NA	NA	False	NA	NA	NA	59849912	59849716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_-_59849700_59849900
tx.224	chr1	+	1387	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	32	-1	-11	0	multi-exon	FALSE	canonical	3	624	junction_3	42.3685024517034	519	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	42890424	42944843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
tx.2240	chr10	+	4438	29	FSM	ENSMUSG00000039994.16	ENSMUST00000055539.11	4457	29	17	2	2	0	multi-exon	FALSE	canonical	3	249	junction_23	47.0561431934758	401	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6608	False	NA	NA	False	NA	NA	NA	128067950	128088808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
tx.22400	chr10	+	2078	10	NIC	ENSMUSG00000058297.17	novel	5238	11	NA	NA	123	-1738	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.23178657161089	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGGTTTTGTTGCTGTTT	9354	False	NA	NA	False	NA	NA	NA	59942163	59967992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_59942479_59957299_59957346_59957505_59957621_59959631_59959747_59961531_59961647_59961975_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
tx.22401	chr10	-	4079	15	NNC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	120.727809893299	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	60983471	60934420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983372
tx.22402	chr10	+	4835	2	NIC	ENSMUSG00000020087.6	novel	512	4	NA	NA	14	-6	intron_retention	FALSE	canonical	3	276	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTGTCTGTTGGCT	NA	False	NA	NA	False	NA	NA	NA	61531306	61538546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_61535408_61537812
tx.22403	chr10	+	3109	9	NNC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	18	junction_7	49.4014169837263	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	61551087	61574432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571233_61571438_61572361
tx.22404	chr10	+	4139	8	NIC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	116	junction_1	25.8330590286073	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	61551082	61574432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61571438_61572361
tx.22405	chr10	+	580	3	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	20	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCCAACTGTAAAATGAG	NA	False	NA	NA	False	NA	NA	NA	61670282	61710000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_+_61670501_61698165_61698280_61709752
tx.22406	chr10	-	2991	36	NIC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-22	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	5.3822080288025	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTGGTTAATCTCTAAA	NA	False	NA	NA	False	NA	NA	NA	61814909	61674013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61728734_61728762_61729693_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61747485_61747513_61797067_61797138_61814127
tx.22407	chr10	+	1847	2	FSM	ENSMUSG00000044312.5	ENSMUST00000050103.2	1540	2	-85	-222	-85	222	multi-exon	FALSE	canonical	3	7	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGGTGACTCCATTGT	9179	False	NA	NA	False	NA	NA	NA	61968783	61970764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_61969107_61969240
tx.22408	chr10	+	206	2	Antisense	novelGene_ENSMUSG00000036955.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTACATAATTTTGGAGGA	NA	False	NA	NA	False	NA	NA	NA	62314450	62407924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_+_62314501_62407768
tx.22409	chr10	-	1749	4	NNC	ENSMUSG00000020077.15	novel	1727	4	NA	NA	-6254	-179	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	4.10960933531265	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGGGAGATGTCATCT	NA	False	NA	NA	False	NA	NA	NA	62350130	62329790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_62330886_62333557_62333703_62343420_62343616_62349816
tx.2241	chr10	+	4428	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	21.2602916254693	81	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACTGTGAGAGTGTG	2337	False	NA	NA	False	NA	NA	NA	128106403	128128718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
tx.22410	chr10	-	5702	6	NIC	ENSMUSG00000036955.17	novel	2472	7	NA	NA	-10	-18	intron_retention	FALSE	canonical	3	136	junction_1	18.9567929777165	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACTAAAAACTTAATA	8232	False	NA	NA	False	NA	NA	NA	62414205	62394339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
tx.22411	chr10	+	3057	8	NIC	ENSMUSG00000071253.9	novel	3145	9	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	28.5328310719352	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATGGCTTGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	62756436	62782278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_62756661_62764074_62764168_62766081_62766216_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
tx.22412	chr10	+	4127	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	17.1001527745659	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	NA	NA	NA	62816020	62849734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831091_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
tx.22413	chr10	-	3890	3	FSM	ENSMUSG00000020069.17	ENSMUST00000119814.3	682	3	-50	-3158	-3	15	multi-exon	FALSE	canonical	3	177	junction_1	86.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGTGTTAGTTATT	5778	False	NA	NA	False	NA	NA	NA	62859676	62850427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_62854005_62855171_62855307_62859498
tx.22414	chr10	+	1481	3	FSM	ENSMUSG00000020072.16	ENSMUST00000130531.2	847	3	51	-685	51	0	multi-exon	FALSE	canonical	2	8	junction_1	1.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATTTGGTGAAATT	4380	False	NA	NA	False	NA	NA	NA	62890039	62894592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_62890285_62892557_62892621_62893419
tx.22415	chr10	-	3887	9	NNC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	73.7892903814639	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCATTGTTCATAGC	NA	False	NA	NA	False	NA	NA	NA	63174809	63154786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_63156744_63157542_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
tx.22416	chr10	-	1695	3	NIC	ENSMUSG00000097134.3	novel	2229	4	NA	NA	-52	298	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTATTCTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	66753570	66747969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_66749445_66751634_66751739_66753454
tx.22417	chr10	+	8476	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-73	2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	35.1364157012825	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	66932110	67092099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
tx.22418	chr10	+	2501	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	117	1352	-11	218	multi-exon	FALSE	canonical	3	32	junction_2	17.4900207674628	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATCTGCTATTCAAA	NA	False	NA	NA	False	NA	NA	NA	67815516	67878346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
tx.22419	chr10	+	4454	11	FSM	ENSMUSG00000019944.15	ENSMUST00000067908.14	4422	11	-21	-11	2	0	multi-exon	FALSE	canonical	1	2	junction_2	2.33452350598575	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCGACTTTTGTGTAAA	NA	False	NA	NA	False	NA	NA	NA	69049002	69127621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_69049206_69051131_69051183_69084600_69084803_69085454_69085559_69102016_69102203_69105732_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
tx.2242	chr10	-	1372	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	-13	1	-13	-1	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGGTCTAAATTTCTA	NA	False	NA	NA	False	NA	NA	NA	128133966	128132008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
tx.22420	chr10	+	3617	5	ISM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	10914	-194	10914	194	3prime_fragment	FALSE	canonical	3	72	junction_4	10.3531396204243	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTATTGTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	70091843	70121992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
tx.22421	chr10	-	3941	7	FSM	ENSMUSG00000003923.15	ENSMUST00000121685.8	899	7	-7	-3035	-7	-13	multi-exon	FALSE	canonical	1	9	junction_6	143.827056641726	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGAATTTGAAACCTG	NA	False	NA	NA	False	NA	NA	NA	71073515	71061306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073287
tx.22422	chr10	-	1032	5	FSM	ENSMUSG00000001663.11	ENSMUST00000001713.10	1037	5	5	0	5	0	multi-exon	FALSE	canonical	1	1	junction_4	2.87228132326901	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCCGTGTTGTTTCTTT	9581	False	NA	NA	False	NA	NA	NA	75634413	75619646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75620068_75622628_75622806_75629910_75630062_75632876_75632965_75634218
tx.22423	chr10	-	1015	5	FSM	ENSMUSG00000033318.8	ENSMUST00000038257.7	1370	5	357	-2	-45	2	multi-exon	FALSE	canonical	3	39	junction_1	6.29980158417708	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTTTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	75670358	75667676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008
tx.22424	chr10	+	716	2	NNC	ENSMUSG00000020229.5	novel	2055	15	NA	NA	40164	186	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACCAGTGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	76023448	76025285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_76023772_76024892
tx.22425	chr10	-	2014	11	FSM	ENSMUSG00000020230.16	ENSMUST00000099571.10	2052	11	30	8	1	2	multi-exon	FALSE	canonical	2	4	junction_10	3.8262252939418	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTCATTTTGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	76073669	76043063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072659_76073583
tx.22426	chr10	-	2161	16	NIC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	-50	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	23.7172229965202	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGACTTCTCTCTGCT	1087	False	NA	NA	False	NA	NA	NA	76797771	76597688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
tx.22427	chr10	+	2091	3	NIC	ENSMUSG00000001436.16	novel	2309	6	NA	NA	-586	-4	intron_retention	FALSE	canonical	3	96	junction_2	2	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCTTTTCTGTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	76877747	76886261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_76878809_76880594_76880737_76885373
tx.22428	chr10	-	5043	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_6	49.9834594889811	45	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5949	False	NA	NA	False	NA	NA	NA	77002368	76888014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
tx.22429	chr10	+	1435	6	NIC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-9	-64	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	21.8595516879921	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAGAGAACGAGCCAGGA	NA	False	NA	NA	False	NA	NA	NA	77814478	77821025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_77814616_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
tx.2243	chr10	+	956	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	59	368	4	-2	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	368	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAACTGTGTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	128158386	128163054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
tx.22430	chr10	+	3520	6	ISM	ENSMUSG00000000732.10	ENSMUST00000105393.3	2814	7	12	1	12	-1	intron_retention	FALSE	canonical	3	8	junction_2	4.4	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGTGTCTGGTGGCT	NA	False	NA	NA	False	NA	NA	NA	77905147	77915358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977
tx.22431	chr10	-	5226	10	NIC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	81	-614	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	149.159703955025	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAGTGCTCTACTTG	NA	False	NA	NA	False	NA	NA	NA	78188195	78105625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78188046
tx.22432	chr10	-	3448	7	NIC	ENSMUSG00000032714.7	novel	3288	8	NA	NA	18	-1	intron_retention	FALSE	canonical	3	19	junction_1	3.23608130649127	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGACTGAGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	78427780	78420337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78425580_78425735_78426078_78427635
tx.22433	chr10	-	2907	2	FSM	ENSMUSG00000045912.10	ENSMUST00000059699.9	6729	2	-38	3860	-13	0	multi-exon	FALSE	canonical	1	4	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCAGGCCTGCTTG	NA	False	NA	NA	False	NA	NA	NA	79449872	79446547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79449173_79449590
tx.22434	chr10	-	4338	12	NIC	ENSMUSG00000020312.13	novel	3243	13	NA	NA	30	-136	intron_retention	FALSE	canonical	3	18	junction_9	2.71207888912296	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAACGTGTAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	79473722	79454621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79455934_79456887_79457022_79458088_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
tx.22435	chr10	+	5403	5	NIC	ENSMUSG00000020331.10	novel	3195	8	NA	NA	8884	5	intron_retention	FALSE	canonical	3	78	junction_1	3.53553390593274	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCGTCTCATTACTTT	NA	False	NA	NA	False	NA	NA	NA	79561351	79571947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
tx.22436	chr10	+	2437	5	NIC	ENSMUSG00000035852.12	novel	2414	5	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.24264068711928	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	NA	False	NA	NA	NA	79658491	79666286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_79658575_79661529_79663269_79663711_79663846_79665226_79665266_79665844
tx.22437	chr10	-	1829	8	NNC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_3	56.5190955630511	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	9769	False	NA	NA	False	NA	NA	NA	79752753	79745885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_79746974_79747775_79747832_79747908_79748013_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
tx.22438	chr10	+	3453	13	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	16	0	intron_retention	FALSE	canonical	3	97	junction_1	125.203917004754	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8480	False	NA	NA	False	NA	NA	NA	80062529	80079734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_80062641_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
tx.22439	chr10	-	296	2	ISM	ENSMUSG00000020163.13	ENSMUST00000138428.8	520	3	2494	0	2494	0	3prime_fragment	FALSE	canonical	3	4161	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	False	NA	NA	False	NA	NA	NA	80240106	80238830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_80238990_80239969
tx.2244	chr10	+	2912	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	12	2	12	-2	multi-exon	TRUE	canonical	3	1246	junction_9	132.722869167299	2247	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGCTTGCTCTTACG	NA	False	NA	NA	False	NA	NA	NA	128173614	128198346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
tx.22440	chr10	-	2061	8	NIC	ENSMUSG00000003341.10	novel	4412	28	NA	NA	12774	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	2.71052370871575	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCACTCCTTCTCCAAC	NA	False	NA	NA	False	NA	NA	NA	80362150	80355424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80356297_80357603_80357732_80357844_80357984_80360162_80360247_80361011_80361236_80361321_80361689_80361817_80361918_80362003
tx.22441	chr10	+	922	7	NNC	ENSMUSG00000055862.8	novel	1196	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.3407708461347	4	6	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGGAACAATTCTTT	NA	False	NA	NA	False	NA	NA	NA	80538537	80541207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539591_80539686_80539763_80539872_80539921_80540845
tx.22442	chr10	+	2759	2	ISM	ENSMUSG00000061589.15	ENSMUST00000149394.2	2820	7	2904	-1111	513	-3	3prime_fragment	FALSE	canonical	3	43	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTTCTCAGTGCCA	5083	False	NA	NA	False	NA	NA	NA	80627800	80631292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_80628608_80629340
tx.22443	chr10	-	3489	11	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	-6	1	intron_retention	FALSE	canonical	3	226	junction_7	25.7194478945408	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3105	False	NA	NA	False	NA	NA	NA	80754085	80737196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
tx.22444	chr10	-	3639	4	FSM	ENSMUSG00000046822.15	ENSMUST00000059551.7	3680	4	41	0	15	0	multi-exon	FALSE	canonical	3	7	junction_3	25.0377492776186	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTATTTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	80873101	80864373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80867535_80869445_80869768_80870751_80870844_80873037
tx.22445	chr10	-	3864	4	NIC	ENSMUSG00000046822.15	novel	3680	4	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_3	28.2488937836511	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTATTTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	80873110	80864373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_80867535_80869445_80869768_80870751_80870844_80872821
tx.22446	chr10	-	1977	12	FSM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	-4	-4	-1	4	multi-exon	FALSE	canonical	3	182	junction_9	245.943486083912	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4768	False	NA	NA	False	NA	NA	NA	80896016	80879904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895961
tx.22447	chr10	+	2530	4	NIC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	15	0	intron_retention	FALSE	canonical	3	742	junction_2	37.1513421321791	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	81220315	81224186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_81221882_81222246_81222324_81223073_81223315_81223540
tx.22448	chr10	-	6343	10	FSM	ENSMUSG00000055053.19	ENSMUST00000117966.2	1655	10	0	-4688	0	-79	multi-exon	FALSE	canonical	3	13	junction_9	6.76775214792936	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGGCAAAAAAAAAG	80	False	NA	NA	False	NA	NA	NA	81266839	81232098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81266619
tx.22449	chr10	-	1936	14	NIC	ENSMUSG00000034758.13	novel	1961	14	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	23.7668657026004	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	NA	False	NA	NA	NA	81436865	81426737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436812
tx.2245	chr10	-	1451	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	-13	-4	-13	4	multi-exon	FALSE	canonical	3	69	junction_4	16.3248277173145	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTTTTTGAGGGGG	6926	False	NA	NA	False	NA	NA	NA	128204879	128198964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
tx.22450	chr10	+	3691	4	FSM	ENSMUSG00000054708.18	ENSMUST00000137978.2	3690	4	2	-3	2	3	multi-exon	FALSE	canonical	3	11	junction_3	0.471404520791032	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGATTTGGAATCCCTT	NA	False	NA	NA	False	NA	NA	NA	81476779	81481804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81476825_81477809_81477883_81478134_81478254_81478350
tx.22451	chr10	+	1276	4	ISM	ENSMUSG00000054708.18	ENSMUST00000154707.8	4635	18	9618	0	-482	0	3prime_fragment	FALSE	canonical	3	46	junction_1	24.7521042876493	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGTCGCAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	81479154	81483441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_81479728_81482138_81482268_81482626_81482693_81482933
tx.22452	chr10	-	3975	2	ISM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	40877	-1	2754	1	3prime_fragment	FALSE	canonical	3	64	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTCCTTTTTCTCC	8735	False	NA	NA	False	NA	NA	NA	83329127	83323312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_83326499_83328338
tx.22453	chr10	-	4189	20	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-13	0	intron_retention	FALSE	canonical	3	74	junction_1	12.6836645438291	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	83484552	83435896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
tx.22454	chr10	+	1901	6	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	14328	6	-3699	-6	3prime_fragment	FALSE	canonical	2	6	junction_2	2.36643191323985	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATGGTAATCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	84426817	84450217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
tx.22455	chr10	+	3314	10	FSM	ENSMUSG00000035620.16	ENSMUST00000038523.15	3069	10	-245	0	-245	0	multi-exon	FALSE	canonical	3	6	junction_9	27.2890336586822	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	84753234	84852311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84850939
tx.22456	chr10	-	2803	7	FSM	ENSMUSG00000020057.3	ENSMUST00000020249.2	2807	7	3	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_2	1.21335164821342	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTCTCGGTTGCAT	NA	False	NA	NA	False	NA	NA	NA	88192934	88158666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_88160648_88161195_88161289_88164944_88165004_88172672_88172851_88176381_88176525_88180505_88180574_88192653
tx.22457	chr10	-	5699	2	ISM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	26920	-1	16795	1	3prime_fragment	FALSE	canonical	3	52	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCCTAACTTTATAAG	4909	False	NA	NA	False	NA	NA	NA	89252909	89244683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_89250355_89252881
tx.22458	chr10	-	3437	14	ISM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	2790	0	2733	0	3prime_fragment	FALSE	canonical	3	126	junction_9	21.0406763002428	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTCTGAGCTTGAACC	NA	False	NA	NA	False	NA	NA	NA	92555492	92520607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347
tx.22459	chr10	+	3934	17	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-199	13	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	65.6229463964397	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACTGTTCTTTATTGG	NA	False	NA	NA	False	NA	NA	NA	92996537	93077203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_92997063_93044033_93044181_93047680_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
tx.2246	chr10	-	1423	6	FSM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	-52	0	-44	0	multi-exon	FALSE	canonical	3	274	junction_1	33.0732520324204	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	128245649	128237263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115
tx.22460	chr10	-	3838	3	NNC	ENSMUSG00000097164.3	novel	6566	3	NA	NA	8	-2678	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	9	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCCATTTCTATACCT	NA	False	NA	NA	False	NA	NA	NA	94524430	94509564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_94512992_94514192_94514310_94524136
tx.22461	chr10	-	6692	2	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTGCCCGAGGAATTTA	4021	False	NA	NA	False	NA	NA	NA	95141816	95135024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_-_95137418_95137517
tx.22462	chr10	+	698	3	FSM	ENSMUSG00000112188.2	ENSMUST00000219583.2	670	3	-18	-10	-18	7	multi-exon	FALSE	canonical	3	30	junction_1	1	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTAGGTGTTTATTCA	3202	False	NA	NA	False	NA	NA	NA	95567070	95575225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_95567365_95570676_95570791_95574935
tx.22463	chr10	+	7406	22	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-28	-7	combination_of_known_junctions	FALSE	canonical	3	6	junction_20	76.3503679415316	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATGGGGACTGAACT	NA	False	NA	NA	False	NA	NA	NA	98750239	98861998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98855139_98855227_98858669
tx.22464	chr10	-	6034	15	NNC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_13	31.4078665565277	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGCCTGATTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	100323199	100279769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100320927_100320988_100323023
tx.22465	chr10	+	2129	5	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	382	-866	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	44.144648599802	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAATCAAT	NA	False	NA	NA	False	NA	NA	NA	103204085	103232153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_103204182_103224757_103225203_103229251_103229410_103229761_103229889_103230850
tx.22466	chr10	-	1942	12	NNC	ENSMUSG00000036009.17	novel	2033	12	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.2127066604228	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATTATGATCAATGTT	NA	False	NA	NA	False	NA	NA	NA	105677240	105599057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661942_105662453_105665708_105665816_105668711_105668877_105676936
tx.22467	chr10	+	2878	3	FSM	ENSMUSG00000020185.17	ENSMUST00000174857.8	2865	3	-15	2	11	-2	multi-exon	FALSE	canonical	3	33	junction_1	1.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCGTTTTCTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	110581310	110592496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_110581541_110582192_110582286_110589941
tx.22468	chr10	+	3014	1	FSM	ENSMUSG00000035759.5	ENSMUST00000219990.2	3047	1	40	-7	40	5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	1	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGTTAATTGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	111134579	111137593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_111134600_111137600
tx.22469	chr10	-	6076	7	ISM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	13855	-1	118	1	3prime_fragment	FALSE	canonical	3	507	junction_5	44.4200280153996	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTGCAGTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	117199020	117180576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879
tx.2247	chr10	-	1100	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	30	0	30	0	multi-exon	FALSE	canonical	3	274	junction_1	32.5444140965679	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	128245713	128237263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
tx.22470	chr10	+	2784	9	NNC	ENSMUSG00000020183.12	novel	5195	9	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.3418742493994	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAATTTTGTGTAAATG	NA	False	NA	NA	False	NA	NA	NA	117465404	117520846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_117465433_117465625_117465793_117495676_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519182
tx.22471	chr10	+	5455	7	ISM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	11861	0	1698	0	3prime_fragment	FALSE	canonical	3	83	junction_6	8.15304987242334	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	6692	False	NA	NA	False	NA	NA	NA	117989597	118004902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
tx.22472	chr10	+	3791	11	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_10	35.5747101182849	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	NA	False	NA	NA	False	NA	NA	NA	120359243	120378818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690_120373794_120376179
tx.22473	chr10	-	4173	11	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	435	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	40.7628507344616	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	120814802	120759317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120788122_120788161_120813688
tx.22474	chr10	-	1230	5	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	227	10525	12	6	5prime_fragment	FALSE	canonical	3	258	junction_4	22.2078251974389	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACTATCATATGCCAGA	NA	False	NA	NA	False	NA	NA	NA	121933049	121924543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
tx.22475	chr10	+	3112	10	FSM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	1	3256	1	1090	multi-exon	FALSE	canonical	0	0	junction_1	11.6428327977153	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTCATTGTGATGTTC	NA	False	NA	NA	False	NA	NA	NA	122514687	122778444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_122515336_122618087_122618251_122638139_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
tx.22476	chr10	+	3996	4	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	356	junction_1	29.4089933334837	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	126877826	126882233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_126880521_126880624_126880739_126880894_126880997_126881147
tx.22477	chr10	+	1733	6	FSM	ENSMUSG00000006731.11	ENSMUST00000219523.2	1497	6	-236	0	-83	0	multi-exon	FALSE	canonical	3	48	junction_1	9.6	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAATTTTTTTGTTTTG	271	False	NA	NA	False	NA	NA	NA	127001010	127004392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569
tx.22478	chr10	-	1880	2	ISM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	2419	-268	1158	4	3prime_fragment	FALSE	canonical	3	105	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCCGTCTTCTGTTCCTC	1648	False	NA	NA	False	NA	NA	NA	127029177	127026242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127027423_127028477
tx.22479	chr10	-	1207	4	ISM	ENSMUSG00000025409.15	ENSMUST00000026476.13	4165	13	5227	0	5	0	3prime_fragment	FALSE	canonical	3	104	junction_2	11.6714276000077	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	1605	False	NA	NA	False	NA	NA	NA	127119532	127117824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394
tx.2248	chr10	+	2331	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-100	913	-11	-1	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATGCCCTTTCTTTGG	215	False	NA	NA	False	NA	NA	NA	128247514	128275294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
tx.22480	chr10	-	1699	2	FSM	ENSMUSG00000040258.7	ENSMUST00000095266.3	1675	2	-17	-7	-17	7	multi-exon	FALSE	canonical	3	10	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTTAAGACCTTTGT	110	False	NA	NA	False	NA	NA	NA	127370445	127361334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127362833_127370244
tx.22481	chr10	-	3128	11	ISM	ENSMUSG00000040249.16	ENSMUST00000049149.15	14888	89	77987	11	47	-11	intron_retention	FALSE	canonical	3	50	junction_6	5.08428952755447	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAAAAGAAACCCAC	NA	False	NA	NA	False	NA	NA	NA	127379030	127374040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053
tx.22482	chr10	+	2939	21	ISM	ENSMUSG00000025401.10	ENSMUST00000079590.7	3439	27	2321	0	2321	0	3prime_fragment	FALSE	canonical	2	6	junction_3	3.278719262151	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCGTATTTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	127543359	127556809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
tx.22483	chr10	-	1961	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	11	-665	11	665	multi-exon	FALSE	canonical	3	22	junction_4	35.9400542570542	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAAGTCTGCATCATGA	7256	False	NA	NA	False	NA	NA	NA	128204549	128198303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204387
tx.22484	chr10	+	6680	28	FSM	ENSMUSG00000014498.10	ENSMUST00000014642.10	6620	28	-58	-2	-54	2	multi-exon	FALSE	canonical	1	1	junction_27	3.16617929972778	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCACCGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	128212929	128229877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128213119_128213437_128213522_128213956_128214036_128214221_128214293_128215249_128215451_128216449_128216538_128216796_128216940_128217714_128217928_128218203_128218283_128218500_128218616_128218769_128218853_128218928_128219047_128219223_128219293_128219437_128219579_128219660_128219742_128221969_128222082_128222277_128222350_128222827_128223030_128223238_128223327_128223455_128223574_128224407_128224628_128224769_128224858_128224955_128225040_128225116_128225263_128225349_128225433_128225638_128225722_128225901_128225994_128226339
tx.22485	chr10	+	2290	7	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	11	-4	intron_retention	FALSE	canonical	3	10	junction_4	45.9190108294545	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTTATGCCCTTTCTT	237	False	NA	NA	False	NA	NA	NA	128247536	128275291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271438_128272336_128272473_128273176_128273281_128273951
tx.22486	chr10	+	3415	4	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	22004	916	18572	-4	3prime_fragment	FALSE	canonical	3	111	junction_2	8.9566858950296	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTTATGCCCTTTCTT	285	False	NA	NA	False	NA	NA	NA	128269618	128275291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_128271454_128272336_128272473_128273176_128273281_128273951
tx.22487	chr10	-	4855	3	ISM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	-1065	0	-1065	0	intron_retention	FALSE	canonical	3	22	junction_1	0.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4672	False	NA	NA	False	NA	NA	NA	128641304	128635904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_128637099_128637219_128637381_128637804
tx.22488	chr11	-	3964	33	FSM	ENSMUSG00000023764.19	ENSMUST00000081318.13	3969	33	-31	36	1	0	multi-exon	FALSE	canonical	0	0	junction_15	28.2531628483874	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCCTACTTTTCATAC	8004	False	NA	NA	False	NA	NA	NA	3143438	3081885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3093694_3093791_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
tx.22489	chr11	-	4464	29	NIC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	3	0	intron_retention	FALSE	canonical	2	2	junction_24	29.2501526247544	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTCTCCTACTTTTC	7985	False	NA	NA	False	NA	NA	NA	3143457	3081889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
tx.2249	chr10	+	4673	29	FSM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	-65	-46	-5	-4	multi-exon	FALSE	canonical	1	3	junction_18	29.4428493449771	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCATCTTGTGGGTGCCT	2616	False	NA	NA	False	NA	NA	NA	128295111	128326037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
tx.22490	chr11	+	3192	5	NNC	ENSMUSG00000020453.18	novel	3702	5	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	167.614140214959	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6270	False	NA	NA	False	NA	NA	NA	3240256	3259083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647_3257881_3257988
tx.22491	chr11	-	4410	15	NIC	ENSMUSG00000020451.18	novel	3514	16	NA	NA	2	-1	intron_retention	FALSE	canonical	3	97	junction_13	51.641227004503	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACAGAGAGTGCCAAA	NA	False	NA	NA	False	NA	NA	NA	3359172	3294256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
tx.22492	chr11	-	5628	14	NNC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	-22	-205	intron_retention	FALSE	canonical	1	2	junction_12	69.0718689259461	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGTCTTTGGCCACTTT	9792	False	NA	NA	False	NA	NA	NA	3321398	3294460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3309231_3310587_3320968
tx.22493	chr11	-	3339	13	FSM	ENSMUSG00000034570.13	ENSMUST00000044507.12	3370	13	24	7	2	0	multi-exon	TRUE	canonical	1	2	junction_6	1.60511335702152	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGCTCCTTCCTGACT	NA	False	NA	NA	False	NA	NA	NA	3454797	3444381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3445167_3445346_3445452_3445559_3445638_3445784_3445923_3449596_3449781_3449890_3450001_3450137_3450250_3450573_3450750_3451045_3451163_3451319_3451429_3451524_3451639_3451986_3453144_3454643
tx.22494	chr11	-	3368	22	FSM	ENSMUSG00000020439.18	ENSMUST00000170588.8	3386	22	19	-1	19	1	multi-exon	FALSE	canonical	2	9	junction_21	27.3941583060523	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8156	False	NA	NA	False	NA	NA	NA	3489273	3467521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487554_3487606_3489111
tx.22495	chr11	-	6363	21	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	19	junction_19	25.1584975704035	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACGATCCTGACTTTTCT	8135	False	NA	NA	False	NA	NA	NA	3489294	3467528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
tx.22496	chr11	-	4997	12	FSM	ENSMUSG00000051427.15	ENSMUST00000093381.11	5015	12	15	3	15	-3	multi-exon	FALSE	canonical	1	1	junction_10	2.2672661660618	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTGTTTTGTGTTTT	8508	False	NA	NA	False	NA	NA	NA	4110276	4091125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4093936_4094025_4094115_4094509_4094650_4096233_4096403_4096541_4096719_4097168_4097360_4097699_4097778_4098438_4099085_4099930_4100103_4101671_4101931_4102908_4103057_4110158
tx.22497	chr11	-	2863	6	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-15	2315	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	73.5129920490249	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTTGAATGGGTGAA	NA	False	NA	NA	False	NA	NA	NA	4391120	4371752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
tx.22498	chr11	+	171	2	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAATAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	4468439	4530192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_4468586_4530167
tx.22499	chr11	+	1210	3	FSM	ENSMUSG00000034209.5	ENSMUST00000037218.2	1110	3	-102	2	-102	-2	multi-exon	FALSE	canonical	3	9	junction_2	0.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTAAGGGTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	5008025	5010383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_5008525_5009432_5009558_5009797
tx.225	chr1	-	2611	11	ISM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	257	4239	-9	3249	5prime_fragment	FALSE	canonical	3	38	junction_10	7.81280999384984	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTATTGATTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	43131632	43090618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
tx.2250	chr10	+	4951	28	FSM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	-104	-815	-31	-1	multi-exon	FALSE	canonical	3	31	junction_27	21.277769719239	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGTGGGTGCCTCTG	2590	False	NA	NA	False	NA	NA	NA	128295085	128326040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
tx.22500	chr11	-	2398	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	1342	junction_9	1044.5656674397	1326	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	5049074	5019689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
tx.22501	chr11	+	1833	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	57	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	76.5709434119758	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	9975	False	NA	NA	False	NA	NA	NA	5049133	5056093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_5049273_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
tx.22502	chr11	+	1810	8	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	706	-2	24	0	3prime_fragment	FALSE	canonical	3	72	junction_1	52.1641835056998	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	5049631	5056093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
tx.22503	chr11	-	1310	6	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-91	-3640	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	23.635566420122	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTTTTGGTCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	5211649	5158472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_5159034_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
tx.22504	chr11	-	3496	6	NNC	ENSMUSG00000049680.18	novel	5089	6	NA	NA	-224	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	17.2973986483517	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTGAATGTATACTCAA	8623	False	NA	NA	False	NA	NA	NA	5691374	5664982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691347
tx.22505	chr11	+	3881	21	FSM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	-50	0	-50	0	multi-exon	FALSE	canonical	3	11	junction_16	4.12886182863995	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCCTGTTCTGACTGG	8622	False	NA	NA	False	NA	NA	NA	5811896	5822088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817097_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
tx.22506	chr11	-	2720	10	FSM	ENSMUSG00000041798.16	ENSMUST00000102920.4	2727	10	7	0	7	0	multi-exon	FALSE	canonical	1	1	junction_2	1.4142135623731	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGGCCTGCTGATTGT	NA	False	NA	NA	False	NA	NA	NA	5900074	5850822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5851815_5852084_5852319_5853099_5853256_5854360_5854545_5856476_5856577_5856682_5856779_5859082_5859203_5860277_5860433_5860861_5861025_5899554
tx.22507	chr11	-	3305	22	NIC	ENSMUSG00000020437.13	novel	3307	22	NA	NA	-20	-1	combination_of_known_junctions	TRUE	canonical	1	1	junction_15	5.07539527408542	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTGCCACTGCTTT	6523	False	NA	NA	False	NA	NA	NA	6469524	6456548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_6456833_6456906_6457062_6457868_6457983_6458189_6458295_6459324_6459470_6460147_6460372_6460867_6461076_6461482_6461650_6462160_6462294_6462462_6462538_6464466_6464538_6464751_6464923_6465093_6465209_6465848_6465995_6466078_6466304_6466747_6466865_6467086_6467198_6467569_6467624_6467851_6468018_6468733_6468828_6468978_6469188_6469308
tx.22509	chr11	-	7292	9	ISM	ENSMUSG00000000384.16	ENSMUST00000156969.8	2324	13	-8	4	-8	-3	intron_retention	FALSE	canonical	3	74	junction_1	160.775464546056	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGGGCCACTGGCTT	NA	False	NA	NA	False	NA	NA	NA	6576051	6565601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971
tx.2251	chr10	+	4586	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-52	-1	-6	1	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGGTGCCTCTGTG	2615	False	NA	NA	False	NA	NA	NA	128295110	128326042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
tx.22510	chr11	+	2740	2	Antisense	novelGene_ENSMUSG00000082579.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	6727739	6741438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_6727932_6738890
tx.22511	chr11	-	5768	15	ISM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	131923	0	-24289	0	3prime_fragment	FALSE	canonical	3	46	junction_5	8.51559194198788	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	3324	False	NA	NA	False	NA	NA	NA	8442964	8381651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092
tx.22512	chr11	-	7489	32	NNC	ENSMUSG00000020422.15	novel	7629	31	NA	NA	-51	0	at_least_one_novel_splicesite	TRUE	canonical	1	17	junction_1	14.7032385454799	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	9610	False	NA	NA	False	NA	NA	NA	8614586	8381651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
tx.22513	chr11	+	2397	7	FSM	ENSMUSG00000040978.5	ENSMUST00000043285.5	2400	7	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	1.25830573921179	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGCCTCTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	8998596	9019356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_8999201_9002693_9002880_9004209_9004319_9006421_9006579_9009910_9010009_9011165_9011387_9018334
tx.22514	chr11	-	3980	8	NNC	ENSMUSG00000020193.4	novel	4248	8	NA	NA	158	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.81190401832181	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTAGCCATGAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	11412250	11229624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_11232698_11302521_11302700_11353980_11354058_11358499_11358608_11365187_11365338_11368161_11368288_11409698_11409780_11412063
tx.22515	chr11	-	1596	2	ISM	ENSMUSG00000020173.18	ENSMUST00000174874.8	5451	15	162283	-2	119779	0	3prime_fragment	FALSE	canonical	3	464	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	NA	False	NA	NA	NA	12199861	12186675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_12188060_12199649
tx.22516	chr11	+	2655	16	FSM	ENSMUSG00000020122.17	ENSMUST00000102884.10	2943	16	9	279	1	-279	multi-exon	FALSE	canonical	0	0	junction_1	1.92757763930679	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTACTATTGATTGAAAT	NA	False	NA	NA	False	NA	NA	NA	16702211	16837644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_16702571_16808895_16809048_16810067_16810252_16812945_16813081_16817230_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140
tx.22517	chr11	-	1550	3	FSM	ENSMUSG00000087060.8	ENSMUST00000130392.8	1540	3	-13	3	6	2	multi-exon	FALSE	canonical	3	28	junction_1	0.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGGTGTATCGTTTA	NA	False	NA	NA	False	NA	NA	NA	16901112	16885156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_16886565_16900881_16900931_16901019
tx.22518	chr11	-	3845	5	ISM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	1198	1	1198	-1	3prime_fragment	FALSE	canonical	3	153	junction_2	14.3069039278245	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAGAGTGAAGAGACTA	NA	False	NA	NA	False	NA	NA	NA	17902677	17888756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577
tx.22519	chr11	+	930	2	FSM	ENSMUSG00000086468.2	ENSMUST00000148496.2	388	2	-531	-11	-497	11	multi-exon	FALSE	canonical	3	24	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTATGCTGTGTTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	17903472	17905109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_17904086_17904792
tx.2252	chr10	+	4673	28	NNC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_27	24.9622485885254	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGGTGCCTCTGTG	2600	False	NA	NA	False	NA	NA	NA	128295095	128326042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323959_128324764
tx.22520	chr11	+	4792	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-680	0	at_least_one_novel_splicesite	TRUE	canonical	2	17	junction_2	73.6392816481319	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	21188600	21271122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_21189372_21213198_21213355_21214826_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
tx.22521	chr11	-	2819	5	FSM	ENSMUSG00000005917.16	ENSMUST00000006071.14	2789	5	-38	8	-38	-3	multi-exon	FALSE	canonical	2	4	junction_1	0.433012701892219	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCAGCGTTGCTCTTC	NA	False	NA	NA	False	NA	NA	NA	21951653	21944771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_21947059_21948369_21948522_21949379_21949586_21951121_21951190_21951547
tx.22522	chr11	-	4669	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-229	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	6.15250402560811	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	9663	False	NA	NA	False	NA	NA	NA	22237024	21955824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
tx.22523	chr11	-	3831	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-33	92	intron_retention	FALSE	canonical	3	225	junction_2	24.7655674946756	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGCTGCATTGAGTGAAA	NA	False	NA	NA	False	NA	NA	NA	23447963	23440228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23445065_23446690_23446882_23447774
tx.22524	chr11	-	1772	9	NNC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-19	-153	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	85.5306049025727	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	23447949	23439735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_23440590_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
tx.22525	chr11	-	5336	14	ISM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	18795	-2498	-7988	2498	3prime_fragment	FALSE	canonical	3	117	junction_1	21.6636471875688	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGATGTTTGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	23826458	23810147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319
tx.22526	chr11	-	3843	2	FSM	ENSMUSG00000032878.17	ENSMUST00000109501.2	3134	2	-31	-678	-1	678	multi-exon	FALSE	canonical	2	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATATGTTTGTCTATTCT	NA	False	NA	NA	False	NA	NA	NA	28534297	28524518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_28527346_28533281
tx.22527	chr11	+	7246	29	NIC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-40	753	combination_of_known_splicesites	TRUE	canonical	1	2	junction_25	15.1308914988847	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGAATTTGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	29323617	29455558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29449334_29449407_29450975_29451057_29453382_29453652_29453851
tx.22528	chr11	+	9441	33	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_26	14.8739495427408	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGTTACAGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	29323676	29460808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
tx.22529	chr11	+	3748	4	NNC	ENSMUSG00000087474.2	novel	1933	2	NA	NA	-917	1821	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	2.44948974278318	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCTGTAATGTATGATG	NA	False	NA	NA	False	NA	NA	NA	30699914	30707968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_30700007_30700139_30700269_30701058_30701181_30704563
tx.2253	chr10	+	3496	15	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	15216	-2	309	2	3prime_fragment	FALSE	canonical	3	76	junction_14	15.1489206189209	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	6990	False	NA	NA	False	NA	NA	NA	128310378	128326043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
tx.22530	chr11	+	1848	2	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACATGGTGTTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	31495804	31499651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_31496002_31498000
tx.22531	chr11	+	1458	5	FSM	ENSMUSG00000020299.7	ENSMUST00000102829.4	2000	5	-25	567	-25	-567	multi-exon	FALSE	canonical	3	12	junction_4	0.707106781186548	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATGTGAATTTC	2259	False	NA	NA	False	NA	NA	NA	31915566	31929084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_31915952_31923555_31923642_31925036_31925136_31926785_31926831_31928241
tx.22532	chr11	-	3011	17	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	10	3	intron_retention	FALSE	canonical	0	0	junction_2	19.6666556320591	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTCACTGTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	32172290	32159581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
tx.22533	chr11	-	3031	18	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24.236436295187	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	NA	False	NA	NA	NA	32172320	32159584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166348_32172168
tx.22534	chr11	-	2988	12	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	2	-370	intron_retention	FALSE	canonical	3	148	junction_5	12.1960568075461	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTATGTGAGTATACTGT	4618	False	NA	NA	False	NA	NA	NA	32217656	32182423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_32183117_32183903_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
tx.22535	chr11	+	717	3	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	-97	-38774	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	15	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCTGTGCACTAGTG	NA	False	NA	NA	False	NA	NA	NA	32483207	32509754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_32483560_32505123_32505289_32509554
tx.22536	chr11	-	2482	2	NIC	ENSMUSG00000040610.8	novel	1533	3	NA	NA	-6	4	intron_retention	FALSE	canonical	3	14	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCTTTTATTTCGTTTT	9484	False	NA	NA	False	NA	NA	NA	33153595	33150747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_33152673_33153038
tx.22538	chr11	-	3504	5	NIC	ENSMUSG00000011254.17	novel	2250	6	NA	NA	0	15	intron_retention	FALSE	canonical	3	110	junction_2	13.8270568090248	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTAACTTGTGTGTTT	6301	False	NA	NA	False	NA	NA	NA	45846321	45837654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_45839156_45841022_45842459_45843561_45843732_45844882_45845060_45846101
tx.22539	chr11	+	3978	2	FSM	ENSMUSG00000020397.16	ENSMUST00000133635.2	740	2	-2686	-552	5	3	multi-exon	FALSE	canonical	3	536	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTCATTCTTGGAAAA	NA	False	NA	NA	False	NA	NA	NA	46327792	46332357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_46330803_46331389
tx.2254	chr10	-	652	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	12	1	-6	0	multi-exon	FALSE	canonical	3	2189	junction_3	223.361948415571	614	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8236	False	NA	NA	False	NA	NA	NA	128329732	128326729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
tx.22540	chr11	-	2930	7	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	13	0	intron_retention	FALSE	canonical	1	1	junction_1	14.8847423745107	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	48707767	48697230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_48698403_48698491_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
tx.22541	chr11	+	3109	11	ISM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	27596	2	27596	-2	3prime_fragment	TRUE	canonical	0	0	junction_6	2.20227155455452	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATAGATTCTAAGTAA	NA	False	NA	NA	False	NA	NA	NA	49527685	49543564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717_49536839_49538773_49538860_49541711
tx.22542	chr11	-	5428	6	NIC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	11.4786758818254	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATAAAGTGGTGAATGT	298	False	NA	NA	False	NA	NA	NA	50718549	50701912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_50706821_50707945_50708039_50708115_50708187_50708635_50708763_50717252_50717338_50718405
tx.22543	chr11	-	9284	5	NIC	ENSMUSG00000049321.18	novel	539	5	NA	NA	5	1444	intron_retention	FALSE	canonical	3	18	junction_2	24.8394846967484	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAACTGTGTCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	50806987	50788094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_50796985_50801262_50801353_50801576_50801704_50803106_50803232_50806935
tx.22544	chr11	-	2497	5	FSM	ENSMUSG00000020335.14	ENSMUST00000109124.10	2455	5	-1	-41	-1	41	multi-exon	FALSE	canonical	0	0	junction_1	1.78535710713571	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTAATTTTGTTCTT	5250	False	NA	NA	False	NA	NA	NA	50822461	50812608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_50814668_50819390_50819487_50820203_50820331_50821727_50821813_50822331
tx.22545	chr11	+	3482	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	9	junction_3	55.0845310005954	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACTTTGTGATTGAGTA	NA	False	NA	NA	False	NA	NA	NA	51153977	51172589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51161363_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.22546	chr11	+	3461	4	FSM	ENSMUSG00000052563.14	ENSMUST00000117859.8	3410	4	-52	1	-52	0	multi-exon	FALSE	canonical	2	4	junction_2	6.94422221866655	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	NA	False	NA	NA	NA	51541728	51548507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_51542041_51544560_51544699_51544837_51544941_51545599
tx.22547	chr11	-	4542	13	ISM	ENSMUSG00000036391.17	ENSMUST00000109097.9	6581	23	34685	-1	34278	1	3prime_fragment	FALSE	canonical	3	64	junction_11	7.65216018883266	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGTTAGTTATTGAA	2987	False	NA	NA	False	NA	NA	NA	51612760	51583089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641
tx.22548	chr11	+	9648	21	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-105	-595	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	26.6482175764159	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGTTTGCATGCACTGT	NA	False	NA	NA	False	NA	NA	NA	53241554	53312062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287460_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
tx.22549	chr11	+	2700	9	ISM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	439	2	-23	-2	3prime_fragment	FALSE	canonical	3	59	junction_3	8.3132048573339	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGTGTGGCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	53661279	53668147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
tx.2255	chr10	-	3809	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-111	283	-110	8	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	440	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	8208	False	NA	NA	False	NA	NA	NA	128361850	128346116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
tx.22550	chr11	-	2885	8	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	10.8984177844347	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTGAATACAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	53782568	53755367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53781972
tx.22551	chr11	-	3009	9	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-107	-5	combination_of_known_splicesites	FALSE	canonical	3	3	junction_7	11.112352361224	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATACCAATTGAATACAAT	NA	False	NA	NA	False	NA	NA	NA	53782593	53755372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53774486_53774591_53781972
tx.22552	chr11	+	160	2	Antisense	novelGene_ENSMUSG00000020268.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	54734993	54740417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_54735117_54740380
tx.22553	chr11	-	1327	2	ISM	ENSMUSG00000020264.6	ENSMUST00000039305.6	2429	10	22234	17	22234	-17	3prime_fragment	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGGCTTCCACCCTGA	NA	False	NA	NA	False	NA	NA	NA	55053669	55049312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_55050442_55053471
tx.22554	chr11	+	4477	12	FSM	ENSMUSG00000020261.16	ENSMUST00000020499.14	1950	12	-34	-2493	-8	0	multi-exon	FALSE	canonical	2	5	junction_11	17.4895482366087	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCAAACTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	55095167	55127156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55123533_55124327
tx.22555	chr11	+	2725	2	NNC	ENSMUSG00000020261.16	novel	5264	11	NA	NA	19771	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTGCAAACTGTGTCT	454	False	NA	NA	False	NA	NA	NA	55124391	55127155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_55127000_55127038
tx.22556	chr11	-	3341	2	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57448978	57433746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_57433907_57445797
tx.22557	chr11	-	3163	3	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	40.5	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	NA	False	NA	NA	False	NA	NA	NA	57450920	57445634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_57446024_57446090_57446486_57448541
tx.22558	chr11	+	4596	11	NIC	ENSMUSG00000020520.15	novel	4715	12	NA	NA	0	-16	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	12.9676520619579	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGTCTGGCATGTC	NA	False	NA	NA	False	NA	NA	NA	57536267	57678324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_57536544_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
tx.22559	chr11	-	766	4	FSM	ENSMUSG00000087165.8	ENSMUST00000152790.8	714	4	-48	-4	-48	4	multi-exon	FALSE	canonical	3	14	junction_3	7.84573486395988	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTCAGTGATTAGCA	NA	False	NA	NA	False	NA	NA	NA	57692291	57686320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_57686621_57686851_57687000_57687137_57687224_57692059
tx.2256	chr10	-	2096	3	FSM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	21	1604	-10	1231	multi-exon	FALSE	canonical	3	75	junction_2	17	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGAAAATTTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	128383622	128379435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128381408_128382696_128382761_128383562
tx.22560	chr11	+	7852	17	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-174	-36	intron_retention	FALSE	canonical	3	480	junction_16	73.2084993358012	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGTATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	57899715	57952821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
tx.22561	chr11	+	1983	3	FSM	ENSMUSG00000078853.9	ENSMUST00000035266.11	2022	3	40	-1	8	1	multi-exon	FALSE	canonical	2	4	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTCTCTTCTTATCTT	NA	False	NA	NA	False	NA	NA	NA	58090421	58098418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_58090606_58092293_58092544_58096869
tx.22562	chr11	+	3937	11	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-4	1744	intron_retention	FALSE	canonical	3	39	junction_1	35.6712769606023	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGCACTTGTGTGGTT	7669	False	NA	NA	False	NA	NA	NA	58197890	58207197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.22563	chr11	+	2534	9	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-8	-5	intron_retention	FALSE	canonical	3	82	junction_1	27.6710588883042	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7665	False	NA	NA	False	NA	NA	NA	58197886	58205434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.22564	chr11	+	3884	6	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	29	0	intron_retention	FALSE	canonical	3	103	junction_1	25.9121593079388	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGTGCTACAGATAT	7702	False	NA	NA	False	NA	NA	NA	58197923	58205439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.22565	chr11	+	3109	7	NNC	ENSMUSG00000013646.18	novel	3016	7	NA	NA	24	-1	intron_retention	FALSE	canonical	1	2	junction_1	49.7172561145077	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	493	False	NA	NA	False	NA	NA	NA	58221599	58238550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_58221776_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
tx.22566	chr11	+	2274	4	NNC	ENSMUSG00000107677.3	novel	2719	3	NA	NA	-1324	-208	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4.18993502999218	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATGTTATGTCAAGAAA	1823	False	NA	NA	False	NA	NA	NA	58642235	58650289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_58642396_58643956_58644171_58647616_58647657_58648429
tx.22567	chr11	+	2497	2	NIC	ENSMUSG00000036860.15	novel	729	4	NA	NA	-4	0	intron_retention	FALSE	canonical	3	585	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	59093326	59096714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_59095584_59096474
tx.22568	chr11	-	2862	4	FSM	ENSMUSG00000009900.8	ENSMUST00000010044.8	2761	4	-104	3	-104	-3	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTGTGGTTTGTTCTA	6070	False	NA	NA	False	NA	NA	NA	59181682	59138861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59140936_59147105_59147372_59165965_59166208_59181402
tx.22569	chr11	+	3359	4	FSM	ENSMUSG00000000126.12	ENSMUST00000108783.4	3318	4	-50	9	-48	-9	multi-exon	FALSE	canonical	1	1	junction_3	1.69967317119759	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAACCTAAGTCCGATGT	5568	False	NA	NA	False	NA	NA	NA	59197705	59224369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59197894_59218389_59218647_59219327_59219591_59221718
tx.2257	chr10	-	2453	3	FSM	ENSMUSG00000039810.12	ENSMUST00000152539.8	992	3	54	-1515	54	1233	multi-exon	FALSE	canonical	3	17	junction_2	46	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAAATTTCTTTGATG	NA	False	NA	NA	False	NA	NA	NA	128383454	128379433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128381408_128382696_128382761_128383039
tx.22570	chr11	-	2793	5	FSM	ENSMUSG00000049291.7	ENSMUST00000061481.7	1243	5	-30	-1520	-30	1520	multi-exon	TRUE	canonical	2	4	junction_3	3.57071421427143	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	59266513	59261974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59263997_59264251_59264395_59264991_59265264_59265982_59266146_59266320
tx.22571	chr11	-	1912	5	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-14	1	combination_of_known_splicesites	TRUE	canonical	3	14	junction_4	118.239957290249	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAGGAGCCGGGTCTA	NA	False	NA	NA	False	NA	NA	NA	59340847	59297968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329343_59340740
tx.22572	chr11	-	3344	10	FSM	ENSMUSG00000020472.15	ENSMUST00000101150.9	3771	10	427	0	3	0	multi-exon	FALSE	canonical	2	12	junction_6	45.5777723603659	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	NA	False	NA	NA	NA	59397043	59376345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394502_59394637_59394973_59395081_59396653_59396789_59396989
tx.22573	chr11	-	4614	12	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	-203	-40	-80	40	intron_retention	FALSE	canonical	3	256	junction_3	18.4758050406694	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	59700617	59682575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625
tx.22574	chr11	-	1607	2	FSM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	0	4	0	-4	multi-exon	FALSE	canonical	3	6	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTGCTTTGCTTTTA	NA	False	NA	NA	False	NA	NA	NA	59855770	59854010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59855193_59855345
tx.22575	chr11	+	2535	2	Antisense	novelGene_ENSMUSG00000000301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTATGTTTCAGGCTTT	5484	False	NA	NA	False	NA	NA	NA	59892701	59897309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_59893690_59895762
tx.22576	chr11	-	6309	3	ISM	ENSMUSG00000000538.19	ENSMUST00000153920.2	3791	4	3534	0	3534	0	3prime_fragment	FALSE	canonical	3	36	junction_2	3.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	NA	False	NA	NA	NA	60126468	60117540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_60121068_60121926_60121964_60123723
tx.22577	chr11	-	1612	8	NIC	ENSMUSG00000042709.16	novel	949	8	NA	NA	-17	-4	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	134.352870745478	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATCTTTGGTCTAAGC	NA	False	NA	NA	False	NA	NA	NA	60307894	60291455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307811
tx.22578	chr11	-	3669	7	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	286	junction_1	38.8887301584062	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	NA	False	NA	NA	NA	60307877	60291463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60300232_60300411_60300457_60307576
tx.22579	chr11	+	4447	2	NIC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	-16	0	intron_retention	FALSE	canonical	3	114	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	60619207	60623777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_60621619_60621741
tx.2258	chr10	-	391	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	191	0	-2	0	multi-exon	FALSE	canonical	3	7075	junction_3	6241.33064516071	4710	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	128384983	128383982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128384299_128384526_128384550_128384817_128384843_128384956
tx.22581	chr11	-	1964	12	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5532	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	5.65393156562408	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGCTGAGAATATT	NA	False	NA	NA	False	NA	NA	NA	61227878	61192455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61203684_61204469_61204584_61216622_61216721_61219353_61219452_61227640
tx.22582	chr11	-	2066	11	NNC	ENSMUSG00000010122.15	novel	2639	17	NA	NA	2030	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	8.3282651254628	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTGTAGATTATTAT	NA	False	NA	NA	False	NA	NA	NA	61254448	61234225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254347
tx.22583	chr11	+	1555	6	FSM	ENSMUSG00000042436.13	ENSMUST00000064783.10	1722	6	-29	196	-29	-196	multi-exon	FALSE	canonical	0	0	junction_1	1.26491106406735	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTTTGTGGACAGACA	NA	False	NA	NA	False	NA	NA	NA	61376227	61379530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_61376312_61376546_61376632_61376863_61377019_61377735_61377833_61377904_61378088_61378579
tx.22584	chr11	+	4822	6	NIC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	11	junction_1	3.9293765408777	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAGTGTTGTCATTGA	NA	False	NA	NA	False	NA	NA	NA	61574913	61600774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_61574995_61575278_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
tx.22585	chr11	+	4879	5	NNC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	-4	-15	intron_retention	FALSE	canonical	1	3	junction_4	7.11951543294907	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCCATCAGAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	61574912	61600762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594328_61598190
tx.22586	chr11	+	3647	13	FSM	ENSMUSG00000042331.14	ENSMUST00000202179.2	6676	13	-56	3085	-4	-36	multi-exon	FALSE	canonical	0	0	junction_10	9.09326673973661	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAACGCAGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	61967866	62110754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62102469_62102530_62110110
tx.22587	chr11	+	3576	11	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-23	-15	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	73.7172978343618	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCTAAAGTTTAAGATCT	NA	False	NA	NA	False	NA	NA	NA	62172275	62207237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62185027_62185175_62199867_62200020_62203841_62204005_62204835
tx.22588	chr11	+	3146	9	ISM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	361	-6	361	6	3prime_fragment	FALSE	canonical	3	145	junction_1	27.7398630133604	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTCTTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	62172670	62207258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
tx.22589	chr11	+	2730	15	ISM	ENSMUSG00000018507.17	ENSMUST00000018651.14	2909	16	1340	212	-247	4	3prime_fragment	FALSE	canonical	1	1	junction_1	4.86553896169326	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTCTTCTAGAAGTATT	8081	False	NA	NA	False	NA	NA	NA	62466703	62491129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_62466952_62469128_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
tx.2259	chr10	-	1933	8	ISM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	3016	-2	2951	2	3prime_fragment	FALSE	canonical	3	1993	junction_7	64.6737495244479	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTTCTCTTTGTG	3082	False	NA	NA	False	NA	NA	NA	128398787	128393632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695
tx.22590	chr11	+	882	2	FSM	ENSMUSG00000087497.8	ENSMUST00000135037.8	901	2	18	1	18	-1	multi-exon	FALSE	canonical	3	11	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTCATGTTTCTT	4252	False	NA	NA	False	NA	NA	NA	63970327	63974084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_63970604_63973478
tx.22591	chr11	+	1598	6	FSM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	3	-4	3	4	multi-exon	FALSE	canonical	3	15	junction_4	4.45421149026402	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGGGGAGAATTACT	3921	False	NA	NA	False	NA	NA	NA	66915982	66926142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934
tx.22592	chr11	-	2314	2	FSM	ENSMUSG00000020910.17	ENSMUST00000136013.2	486	2	-1438	-390	-1438	26	multi-exon	FALSE	canonical	3	109	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGGGCTGTGTTTGGCCT	NA	False	NA	NA	False	NA	NA	NA	66932791	66928704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_66929272_66931044
tx.22593	chr11	+	2941	16	NIC	ENSMUSG00000020908.15	novel	6031	41	NA	NA	15121	0	intron_retention	TRUE	canonical	2	13	junction_1	5.25187797099497	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGTTTTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	66984246	66993112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
tx.22594	chr11	+	3914	24	NIC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17691	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_21	20.5284624211406	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGCTCTGCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	67235619	67262413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67260134_67260231_67261745_67261881_67262313
tx.22595	chr11	-	3202	5	ISM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-15	40585	-15	2131	5prime_fragment	FALSE	canonical	3	16	junction_4	2.69258240356725	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	67812994	67785933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
tx.22596	chr11	+	786	5	NNC	ENSMUSG00000020895.15	novel	779	5	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	158.914088425161	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGCAAGGCGTATACT	4613	False	NA	NA	False	NA	NA	NA	68961597	68963850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963325_68963571
tx.22597	chr11	+	3312	18	ISM	ENSMUSG00000020893.18	ENSMUST00000021271.14	4671	23	5	3666	5	-2	5prime_fragment	FALSE	canonical	3	10	junction_1	5.84636047433339	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGATTCTTCCCCG	NA	False	NA	NA	False	NA	NA	NA	68989778	68997120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_68989835_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
tx.22598	chr11	+	2525	15	FSM	ENSMUSG00000032807.6	ENSMUST00000036424.3	2431	15	-95	1	-95	-1	multi-exon	FALSE	canonical	0	0	junction_2	11.3227241259625	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGTCTGAGAACGTGGG	1810	False	NA	NA	False	NA	NA	NA	69047719	69060617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69048220_69049099_69049305_69053493_69053576_69053718_69053812_69053946_69054070_69054333_69054438_69054752_69054926_69055157_69055302_69056676_69056881_69057055_69057143_69057599_69057770_69058181_69058304_69059603_69059705_69060043_69060215_69060371
tx.22599	chr11	-	887	2	FSM	ENSMUSG00000045377.6	ENSMUST00000050140.6	1582	2	-19	714	-19	-714	multi-exon	FALSE	canonical	3	22	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTCTGTGAATACAGGG	NA	False	NA	NA	False	NA	NA	NA	69289079	69288058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69288708_69288841
tx.226	chr1	-	2852	2	ISM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	40887	49	9091	-49	3prime_fragment	FALSE	canonical	3	49	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTTCTTGGGTCATT	7653	False	NA	NA	False	NA	NA	NA	43091002	43086428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_43088996_43090717
tx.2260	chr10	-	2507	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-22	-2	-22	0	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	1539	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	-9	True	NA	NA	False	NA	NA	NA	128401878	128393634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
tx.22600	chr11	+	900	2	NNC	ENSMUSG00000086591.2	novel	859	2	NA	NA	3828	14	intron_retention	FALSE	canonical	3	26	junction_1	0	11	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTCTAGAACTTGATTT	2401	False	NA	NA	False	NA	NA	NA	69343201	69344516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_69343301_69343715
tx.22601	chr11	-	814	2	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	10802	4	8679	-4	3prime_fragment	FALSE	canonical	3	28	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTTTTGTCTATTT	9584	False	NA	NA	False	NA	NA	NA	69675967	69674865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_69675588_69675875
tx.22602	chr11	-	2715	5	NNC	ENSMUSG00000042826.14	novel	2534	6	NA	NA	1199	-2	intron_retention	FALSE	canonical	1	1	junction_4	5.02493781056044	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGAGTGTTATCTGACA	4737	False	NA	NA	False	NA	NA	NA	69691343	69686900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_69689099_69689389_69689505_69690177_69690282_69690491_69690603_69691156
tx.22603	chr11	+	1899	7	NIC	ENSMUSG00000019461.13	novel	2785	8	NA	NA	-33	0	intron_retention	FALSE	canonical	3	60	junction_1	4.99165971062398	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAGAAGCCGGATGT	NA	False	NA	NA	False	NA	NA	NA	69737409	69741862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738850_69739039_69739202_69740837_69741000_69741169
tx.22604	chr11	+	1817	8	NNC	ENSMUSG00000019461.13	novel	2785	8	NA	NA	-21	112	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	22.8963948681705	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTAGTTTTCATCAC	NA	False	NA	NA	False	NA	NA	NA	69737421	69741981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_69737518_69737819_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
tx.22605	chr11	+	1887	8	NNC	ENSMUSG00000019461.13	novel	2785	8	NA	NA	6	117	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.9369921217503	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTTTTCATCACCCATA	NA	False	NA	NA	False	NA	NA	NA	69737448	69741986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_69737518_69737727_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
tx.22606	chr11	+	5257	29	FSM	ENSMUSG00000047284.15	ENSMUST00000177476.8	4952	29	1	-306	1	1	multi-exon	FALSE	canonical	3	25	junction_15	17.9310968625424	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTCCGCCTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	69792642	69804647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
tx.22607	chr11	+	3293	7	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-111	-1	intron_retention	FALSE	canonical	3	36	junction_1	22.5141930543577	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGTCTCTGGCTCTTC	NA	False	NA	NA	False	NA	NA	NA	69826510	69832430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_69827787_69829167_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
tx.22608	chr11	+	1180	8	NNC	ENSMUSG00000040963.16	novel	672	5	NA	NA	-1605	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	15.9885162870488	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTAGCCTGGTTGTTT	5385	False	NA	NA	False	NA	NA	NA	69986912	69997013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_69987005_69987627_69987745_69988004_69988101_69988645_69988718_69988878_69988966_69989053_69989200_69996201_69996309_69996550
tx.22609	chr11	-	1941	8	FSM	ENSMUSG00000000320.11	ENSMUST00000108574.3	2314	8	0	373	0	-373	multi-exon	FALSE	canonical	3	24	junction_3	2.55550625999976	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGTCACACGTAGAGA	7414	False	NA	NA	False	NA	NA	NA	70146167	70140161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
tx.2261	chr10	-	4539	11	ISM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-22	0	-22	0	intron_retention	FALSE	canonical	3	1884	junction_8	103.450906230927	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTGTGTGTTCTCTT	-9	True	NA	NA	False	NA	NA	NA	128401878	128393636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445
tx.22610	chr11	-	4564	2	ISM	ENSMUSG00000018920.12	ENSMUST00000154475.2	1662	6	-132	1	20	-1	intron_retention	FALSE	canonical	3	24	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGCCCCCATTGACA	7620	False	NA	NA	False	NA	NA	NA	70350790	70346016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_70346271_70346480
tx.22611	chr11	-	4372	21	FSM	ENSMUSG00000040712.17	ENSMUST00000108545.9	4377	21	0	5	0	-2	multi-exon	FALSE	canonical	2	2	junction_16	7.40877857679658	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTAGCCTCCGGCCTCTC	8389	False	NA	NA	False	NA	NA	NA	70578769	70560293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
tx.22612	chr11	-	1064	7	FSM	ENSMUSG00000057054.12	ENSMUST00000108542.8	1080	7	5	11	5	-3	multi-exon	FALSE	canonical	1	2	junction_5	4.07226390762354	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTGTTTCTGTGCGA	NA	False	NA	NA	False	NA	NA	NA	70590976	70579197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70579576_70579810_70579971_70580571_70580766_70581008_70581049_70581264_70581379_70586689_70586775_70590883
tx.22613	chr11	-	5166	12	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-21	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.5540891040778	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGATCTGTGTGGCCTCT	NA	False	NA	NA	False	NA	NA	NA	70895284	70875016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_70878254_70879892_70879980_70882933_70883064_70883178_70883442_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
tx.22614	chr11	-	1175	7	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	8	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	209.920619917784	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGCTTTCGTGTGATC	NA	False	NA	NA	False	NA	NA	NA	70910087	70900751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909934
tx.22615	chr11	+	3575	4	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	1	0	intron_retention	TRUE	canonical	3	210	junction_3	16.2138486760204	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	NA	False	NA	NA	NA	71933281	71938196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_71933361_71933842_71936601_71937165_71937220_71937512
tx.22616	chr11	-	1987	10	NNC	ENSMUSG00000040543.17	novel	3993	8	NA	NA	-41	-1247	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.330686329267	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATGGTGAAGTCTCATT	NA	False	NA	NA	False	NA	NA	NA	72026645	71959874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_71960633_71961128_71961314_71961713_71961837_71962224_71962415_71965244_71965481_71965784_71965862_71983353_71983402_72003082_72003191_72010912_72011009_72026479
tx.22617	chr11	+	1488	2	FSM	ENSMUSG00000053574.6	ENSMUST00000124762.2	1427	2	-55	-6	-21	6	multi-exon	FALSE	canonical	2	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTCTTATTCTCATAC	NA	False	NA	NA	False	NA	NA	NA	72105942	72109276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_72106828_72108673
tx.22618	chr11	+	5130	11	ISM	ENSMUSG00000020790.15	ENSMUST00000102548.11	3324	23	39912	-3633	-7847	0	3prime_fragment	FALSE	canonical	3	180	junction_1	18.8204675818642	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGTAAACTTT	NA	False	NA	NA	False	NA	NA	NA	72642894	72662047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
tx.22619	chr11	-	2048	3	ISM	ENSMUSG00000057778.15	ENSMUST00000079681.6	2393	4	6639	1	6624	-1	3prime_fragment	FALSE	canonical	3	6	junction_2	4	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGCTTTTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	72680043	72668058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_72669779_72673473_72673661_72679902
tx.2262	chr10	-	6058	28	FSM	ENSMUSG00000018166.9	ENSMUST00000082059.7	6016	28	-48	6	-48	-6	multi-exon	FALSE	canonical	0	0	junction_1	16.414470513838	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTTGTGGATT	NA	False	NA	NA	False	NA	NA	NA	128425569	128403397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128425288
tx.22620	chr11	-	2139	4	FSM	ENSMUSG00000057778.15	ENSMUST00000156294.8	2158	4	35	-16	-13	-1	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGCTTTTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	72686933	72668058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686842
tx.22621	chr11	+	11335	55	FSM	ENSMUSG00000055670.15	ENSMUST00000207107.2	11306	55	-44	15	-16	-15	multi-exon	FALSE	canonical	0	0	junction_41	4.3322252461051	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTACAACTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	72687035	72817929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72721403_72721521_72722368_72722548_72728008_72728108_72734081_72734174_72735164_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749156_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429_72757632_72758747_72758897_72760512_72760754_72763429_72763510_72764689_72764784_72765723_72766187_72767381_72767547_72771396_72771517_72772041_72772204_72775167_72775298_72777459_72777599_72778968_72779135_72779822_72780086_72781917_72782052_72784087_72784239_72785971_72786112_72790329_72790608_72791457_72791633_72792152_72792286_72797657_72797858_72799219_72799340_72800955_72801148_72801987_72802089_72803648_72803785_72803876_72804237_72806042_72806187_72807244_72807414_72807994_72808094_72808529_72808696_72813155_72813310_72813935_72814008_72815462
tx.22622	chr11	+	4526	12	NIC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	6	-9260	intron_retention	FALSE	canonical	3	251	junction_9	29.8453313208765	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAAGGAGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	72938704	72970883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
tx.22623	chr11	-	3108	2	ISM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	12147	5	1911	-5	intron_retention	FALSE	canonical	3	77	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACACTCGGAACGTTT	NA	False	NA	NA	False	NA	NA	NA	73077721	73074427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_73075878_73076063
tx.22624	chr11	+	4028	4	FSM	ENSMUSG00000069814.7	ENSMUST00000100866.3	4002	4	-37	11	-37	-11	multi-exon	FALSE	canonical	2	6	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATTCTCACGATGAGAG	NA	False	NA	NA	False	NA	NA	NA	74510393	74532331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_74510673_74520784_74520938_74526066_74526115_74528783
tx.22625	chr11	+	5396	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	82.5694955779675	50	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	74540320	74561673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
tx.22626	chr11	+	4610	5	NIC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	-64	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	37.5923861972075	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCAGCATCTGGGTC	NA	False	NA	NA	False	NA	NA	NA	74721681	74736549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_74722228_74727188_74727775_74728437_74728550_74732986_74733180_74733376
tx.22629	chr11	+	3267	11	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-13	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	24.4040980165217	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGGATGGCAACTC	NA	False	NA	NA	False	NA	NA	NA	75239307	75296516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
tx.2263	chr10	-	436	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	245	0	22	0	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	1582	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	128462371	128460405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
tx.22631	chr11	+	3376	11	NIC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-144	0	intron_retention	FALSE	canonical	3	99	junction_5	23.4682764599363	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCGTGTGACTCCTTT	5295	False	NA	NA	False	NA	NA	NA	75521669	75539691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
tx.22632	chr11	-	1673	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111683	-755	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	33.6961210145704	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTTAGTTTCTTC	1411	False	NA	NA	False	NA	NA	NA	76178211	76148778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178098
tx.22633	chr11	+	1020	4	FSM	ENSMUSG00000020843.16	ENSMUST00000120699.8	746	4	-27	-247	-27	247	multi-exon	FALSE	canonical	3	7	junction_1	120.856204731996	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAGTATCTTTGCTGTCC	NA	False	NA	NA	False	NA	NA	NA	76297750	76305402	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_76297970_76300467_76300665_76301952_76302026_76304871
tx.22634	chr11	-	3974	6	ISM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	9144	5	9132	-5	3prime_fragment	FALSE	canonical	3	228	junction_2	29.403401163811	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCCATGTCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	76645261	76617432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194
tx.22635	chr11	+	9221	14	NIC	ENSMUSG00000037926.16	novel	4475	14	NA	NA	-45	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	3.58497852237878	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTGTTTCAAGTGTA	3581	False	NA	NA	False	NA	NA	NA	77239060	77351043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
tx.22636	chr11	+	2602	10	NNC	ENSMUSG00000020836.16	novel	1418	10	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.16227766016838	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGTTTGAAACCGCTT	3987	False	NA	NA	False	NA	NA	NA	77353260	77361308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_77353581_77354736_77354937_77356491_77356615_77357020_77357151_77357243_77357426_77359091_77359197_77359286_77359433_77359735_77359794_77359882_77360114_77360201
tx.22639	chr11	-	1510	6	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	78	-8	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	63.3782297007419	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	77404118	77398932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403723_77403985
tx.2264	chr10	-	2338	4	FSM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	159	0	159	0	multi-exon	FALSE	canonical	3	11	junction_3	1.88561808316413	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGAATCTCTTGGGCC	8751	False	NA	NA	False	NA	NA	NA	128509783	128505762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128507796_128507972_128508151_128508407_128508472_128509720
tx.22640	chr11	-	1563	6	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	78	-9	intron_retention	FALSE	canonical	3	30	junction_4	59.4521656460049	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCGGAGTCGTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	77404118	77398933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403493_77403792_77403985
tx.22641	chr11	-	1796	5	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	57	6	57	-6	intron_retention	FALSE	canonical	3	152	junction_1	17.1227188261678	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	NA	False	NA	NA	NA	77404139	77398930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478
tx.22642	chr11	+	4518	5	NIC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	-36	-721	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	100.022497469319	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTCCAGTTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	77576944	77602846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_77577334_77579112_77579158_77582367_77584081_77596334_77596368_77600508
tx.22643	chr11	+	3919	3	NIC	ENSMUSG00000037750.17	novel	3358	3	NA	NA	-35	638	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	20.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATCTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	78006396	78048164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_78006664_78033918_78034041_78044634
tx.22644	chr11	-	2637	15	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	14.9114734622815	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6270	False	NA	NA	False	NA	NA	NA	78067479	78056931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78062065_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
tx.22645	chr11	+	1322	5	NIC	ENSMUSG00000019437.18	novel	457	4	NA	NA	-32	-41	intron_retention	FALSE	canonical	3	12	junction_1	80.151419201409	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGCATCATCATGT	NA	False	NA	NA	False	NA	NA	NA	78068923	78071605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_78069063_78069863_78070048_78070195_78070279_78070365_78070449_78070772
tx.22646	chr11	-	1137	5	NIC	ENSMUSG00000001095.6	novel	2412	12	NA	NA	21280	-215	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.04152298679729	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGGGTGTGTTTCCCGGT	9744	False	NA	NA	False	NA	NA	NA	78291763	78288127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_78288682_78289116_78289255_78289857_78290020_78291301_78291391_78291569
tx.22647	chr11	+	5048	2	NIC	ENSMUSG00000020829.10	novel	749	4	NA	NA	628	-1	intron_retention	FALSE	canonical	3	91	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTTTGGGGCTTTCT	9018	False	NA	NA	False	NA	NA	NA	78357203	78362770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_78361678_78362196
tx.22648	chr11	-	3541	7	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	84	-55	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	55.9871016891887	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	NA	False	NA	NA	NA	78427013	78413730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419922_78420066_78420853_78421174_78426911
tx.22649	chr11	+	484	3	ISM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	9433	7499	9388	96	3prime_fragment	FALSE	canonical	3	230	junction_1	20.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTTTGCTTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	78726842	78730197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_78726985_78728915_78729009_78729948
tx.2265	chr10	-	3205	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	-25	0	-25	0	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	230	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTGGACTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	128532158	128513043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
tx.22650	chr11	-	4535	19	NIC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-70	1456	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	11.296372191609	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTACAGAC	NA	False	NA	NA	False	NA	NA	NA	79037303	78906405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
tx.22651	chr11	+	4147	14	FSM	ENSMUSG00000020716.17	ENSMUST00000131800.2	3851	14	-285	-11	-91	11	multi-exon	FALSE	canonical	2	3	junction_2	2.72181630968525	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATTGTGTTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	79230427	79321625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403
tx.22652	chr11	+	1046	2	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGGTTGATCACCTC	NA	False	NA	NA	False	NA	NA	NA	79864504	79866015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_79864672_79865136
tx.22653	chr11	+	4598	10	ISM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	-27	-1665	-27	1665	intron_retention	FALSE	canonical	3	12	junction_2	3.01027048536535	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCTTCACTCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	80044903	80071449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871
tx.22654	chr11	-	3701	2	NNC	ENSMUSG00000086507.2	novel	984	3	NA	NA	372	-3590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80068083	80053276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_80056876_80067981
tx.22655	chr11	+	3765	8	NIC	ENSMUSG00000017692.9	novel	3736	9	NA	NA	-62	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.25876975726313	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTTATTCAGGGAGTG	7763	False	NA	NA	False	NA	NA	NA	80191675	80246772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_80192098_80210383_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
tx.22656	chr11	+	5913	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173347.8	3631	20	-34	-2248	17	-1	multi-exon	FALSE	canonical	0	0	junction_1	50.9559583885031	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTCCCCCCCA	NA	False	NA	NA	False	NA	NA	NA	82671984	82695099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
tx.22657	chr11	+	5915	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	-42	-76	19	0	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	NA	False	NA	NA	NA	82671986	82695100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
tx.22658	chr11	-	2264	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	35	junction_2	72.0513705629532	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCAGCTTCTTGTTC	8343	False	NA	NA	False	NA	NA	NA	82799197	82791595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
tx.22659	chr11	-	6730	3	ISM	ENSMUSG00000069793.13	ENSMUST00000038211.13	5769	5	4865	0	4172	0	3prime_fragment	FALSE	canonical	3	41	junction_1	2.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTGTCTTTAAG	NA	False	NA	NA	False	NA	NA	NA	82877791	82869215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_82872813_82872979_82873704_82875382
tx.2266	chr10	-	3138	7	ISM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-19	-5	-18	0	intron_retention	FALSE	canonical	3	682	junction_2	229.276155662894	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATCTCTTTCATAT	8229	False	NA	NA	False	NA	NA	NA	128540918	128533807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794
tx.22660	chr11	+	4958	3	FSM	ENSMUSG00000018986.11	ENSMUST00000019130.8	1816	3	-28	-3114	-28	3114	multi-exon	FALSE	canonical	1	4	junction_1	4.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCCGTTTGTCC	3766	False	NA	NA	False	NA	NA	NA	83082127	83109094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83082235_83103369_83104440_83105313
tx.22661	chr11	+	346	3	FSM	ENSMUSG00000093483.2	ENSMUST00000176545.2	356	3	7	3	-1	0	multi-exon	FALSE	canonical	3	49	junction_1	166	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTATTTGTTTGGGTA	5876	False	NA	NA	False	NA	NA	NA	83182552	83185455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83182660_83182799_83182924_83185340
tx.22662	chr11	-	2562	3	FSM	ENSMUSG00000018733.11	ENSMUST00000176518.2	2501	3	-58	-3	3	2	multi-exon	FALSE	canonical	3	48	junction_2	7.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTTCTTGAAGTTTTT	2413	False	NA	NA	False	NA	NA	NA	83189781	83185898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_83187267_83188313_83188868_83189141
tx.22663	chr11	+	1676	5	ISM	ENSMUSG00000020680.16	ENSMUST00000134185.8	881	7	2	2857	2	-2689	5prime_fragment	FALSE	canonical	3	38	junction_4	6.75925291729789	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	8656	False	NA	NA	False	NA	NA	NA	83363913	83377182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802
tx.22664	chr11	+	7671	23	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	14	-6	combination_of_known_junctions	FALSE	canonical	2	4	junction_22	26.3327405170919	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAACTGGGTGTCTGTTC	1446	False	NA	NA	False	NA	NA	NA	83855267	83935398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
tx.22665	chr11	+	5440	15	ISM	ENSMUSG00000034940.16	ENSMUST00000183456.8	3990	23	-24	28846	-24	20795	5prime_fragment	FALSE	canonical	3	30	junction_2	23.2691658989456	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGGGGATGTGTGTA	1456	False	NA	NA	False	NA	NA	NA	83855277	83902908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
tx.22666	chr11	-	1963	14	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	18	-7	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_2	181.946510118712	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTCACTGTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	84404330	84313687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_84313846_84326559_84326726_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
tx.22667	chr11	-	179	2	Antisense	novelGene_ENSMUSG00002075861.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	7226	False	NA	NA	False	NA	NA	NA	84833145	84752347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_84752381_84832999
tx.22668	chr11	+	6124	24	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-63	0	intron_retention	FALSE	canonical	3	91	junction_5	18.5845027620099	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	84770910	84801948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
tx.22669	chr11	-	5591	10	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	72311	2	-6299	-2	3prime_fragment	FALSE	canonical	3	49	junction_2	11.049831013735	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGGTGTCTCATTCT	NA	False	NA	NA	False	NA	NA	NA	86176117	86157860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938
tx.2267	chr10	-	2431	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-20	-5	-19	0	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	970	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATCTCTTTCATAT	8228	False	NA	NA	False	NA	NA	NA	128540919	128533807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
tx.22670	chr11	-	6503	13	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	68445	3	-10165	-3	3prime_fragment	FALSE	canonical	3	49	junction_2	10.1280002413551	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGGTGTCTCATTC	NA	False	NA	NA	False	NA	NA	NA	86179983	86157861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758
tx.22671	chr11	+	3240	8	NIC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	-4	-2477	intron_retention	TRUE	canonical	3	265	junction_1	21.9144905931939	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGACCTGTTATGTA	NA	False	NA	NA	False	NA	NA	NA	86375478	86387374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
tx.22672	chr11	+	5989	3	FSM	ENSMUSG00000065589.3_ENSMUSG00000020492.12	ENSMUST00000131202.2	673	3	-2790	-2526	75	-1	multi-exon	FALSE	canonical	3	196	junction_2	4	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGCCTCCATGTTATA	NA	False	NA	NA	False	NA	NA	NA	87003904	87015459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87007017_87008493_87008671_87012759
tx.22673	chr11	-	1756	6	ISM	ENSMUSG00000052234.3	ENSMUST00000049768.4	2689	13	5244	-1	1476	1	3prime_fragment	FALSE	canonical	2	6	junction_4	6.99714227381436	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCTGTCTCTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	87761118	87754824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_87755231_87755520_87755734_87756230_87756469_87759376_87759548_87760072_87760329_87760646
tx.22674	chr11	-	4738	11	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	9	-413	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	23.0783448279984	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAGCCAGCACTTTATA	3841	False	NA	NA	False	NA	NA	NA	88951565	88928820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_88931738_88932321_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
tx.22675	chr11	-	5665	4	FSM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	-24	1	-24	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGTATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	90281745	90227362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90281075
tx.22676	chr11	+	5791	19	ISM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	39680	-1	1160	1	3prime_fragment	FALSE	canonical	3	57	junction_5	6.64069013221508	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAAGTCTAGTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	93974773	94016912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
tx.22677	chr11	+	4883	9	FSM	ENSMUSG00000038976.13	ENSMUST00000107748.2	3095	9	-1792	4	1392	-4	multi-exon	FALSE	canonical	3	26	junction_1	8.14612638006556	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCGTCGCCTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	94885097	94897721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
tx.22678	chr11	+	2174	4	NNC	ENSMUSG00000050860.7	novel	590	3	NA	NA	-22	1	intron_retention	FALSE	canonical	0	0	junction_3	15.1730755689881	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGACTTGTTCTCTTGT	2175	False	NA	NA	False	NA	NA	NA	95715302	95722967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_95715536_95719491_95719602_95720551_95720674_95721258
tx.22679	chr11	-	6733	2	ISM	ENSMUSG00000013415.10_ENSMUSG00000093358.3	ENSMUST00000138513.2	690	4	1356	-6273	1356	0	3prime_fragment	FALSE	canonical	3	673	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGTGTGTCTGTGCTTC	7339	False	NA	NA	False	NA	NA	NA	95857305	95847988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_95854419_95857002
tx.2268	chr10	-	4645	5	NIC	ENSMUSG00000025358.17	novel	2971	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	1013	junction_1	121.477364146577	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTGAATCTCTTTCATA	8244	False	NA	NA	False	NA	NA	NA	128540903	128533808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_128535080_128535340_128537314_128538281_128538453_128539575_128539697_128539794
tx.22680	chr11	+	754	2	NNC	ENSMUSG00000099928.2	novel	422	3	NA	NA	1309	40	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAAATGTCTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	95898023	95898921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_95898430_95898573
tx.22681	chr11	+	1361	2	FSM	ENSMUSG00000049604.4	ENSMUST00000062709.4	2206	2	-9	854	-9	-854	multi-exon	FALSE	canonical	2	9	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACAGTTTCCTCTCAGAT	3935	False	NA	NA	False	NA	NA	NA	96085132	96087419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96085873_96086798
tx.22682	chr11	+	1834	5	FSM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	-283	-631	-283	-2	multi-exon	FALSE	canonical	3	78	junction_1	29.0978951128772	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGACCACTCATTG	NA	False	NA	NA	False	NA	NA	NA	96957425	96959728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
tx.22683	chr11	-	3353	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	17.5499287747842	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	6504	False	NA	NA	False	NA	NA	NA	97041901	97026998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97041784
tx.22684	chr11	-	4930	9	FSM	ENSMUSG00000038517.16	ENSMUST00000107615.8	3333	9	-1597	0	186	0	multi-exon	FALSE	canonical	3	24	junction_5	12.8160056179763	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	6270	False	NA	NA	False	NA	NA	NA	97042135	97026998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187
tx.22685	chr11	-	3346	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	15.1070255914995	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	7482	False	NA	NA	False	NA	NA	NA	97040923	97026998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97040816
tx.22686	chr11	-	3477	9	FSM	ENSMUSG00000038517.16	ENSMUST00000066078.12	3338	9	-141	2	-141	0	multi-exon	FALSE	canonical	3	33	junction_5	10.7579912158358	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	7726	False	NA	NA	False	NA	NA	NA	97040679	97026998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187
tx.22687	chr11	-	2082	9	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-3	8	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	14.945212444124	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCGACTCCACTGCAT	6081	False	NA	NA	False	NA	NA	NA	97042324	97029223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
tx.22688	chr11	-	4740	18	NNC	ENSMUSG00000038453.18	novel	7089	20	NA	NA	-10313	1381	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	2.88775004909025	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCCTCTATGATTTGA	1987	False	NA	NA	False	NA	NA	NA	97438084	97402303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_97403475_97409435_97409583_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97437710
tx.22689	chr11	+	4744	19	ISM	ENSMUSG00000038437.12	ENSMUST00000044730.12	7274	20	1482	2322	-105	610	3prime_fragment	FALSE	canonical	0	0	junction_11	4.97772817435603	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACGTAGTACAGATATAT	NA	False	NA	NA	False	NA	NA	NA	97555721	97573967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_97555861_97556311_97556367_97556555_97556666_97557615_97557720_97557900_97557995_97560249_97560463_97561078_97561178_97563282_97563419_97564285_97564898_97565263_97565446_97565599_97565709_97566964_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371
tx.2269	chr10	-	2287	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	-48	1	-20	-1	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	521	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTGAATCTCTTTCATA	8227	False	NA	NA	False	NA	NA	NA	128540920	128533808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
tx.22690	chr11	-	4866	12	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-8	-7	intron_retention	FALSE	canonical	2	14	junction_1	24.7242645229003	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	97913468	97892340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
tx.22691	chr11	+	1436	4	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	21055	3	9280	-3	3prime_fragment	FALSE	canonical	3	34	junction_1	6.79869268479038	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCGTGTGCCTCCTCC	6928	False	NA	NA	False	NA	NA	NA	98653691	98659829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_98653894_98654354_98654614_98655103_98655232_98658982
tx.22692	chr11	+	4090	15	FSM	ENSMUSG00000038020.6	ENSMUST00000107479.3	4855	15	71	694	71	4	multi-exon	TRUE	non_canonical	0	0	junction_2	1.24539969815448	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTTATGTTCTCCGT	NA	False	NA	NA	False	NA	NA	NA	98727681	98743829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98728500_98731085_98731165_98733020_98733157_98733383_98733482_98736700_98736814_98736947_98737116_98737901_98738000_98738112_98738236_98739943_98740123_98740200_98740292_98740754_98740806_98740919_98741008_98741190_98741256_98741610_98741666_98741901
tx.22693	chr11	+	2104	3	FSM	ENSMUSG00000038020.6	ENSMUST00000139889.2	2077	3	-23	-4	-23	4	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTTATGTTCTCCGT	214	False	NA	NA	False	NA	NA	NA	98741134	98743829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98741256_98741610_98741666_98741901
tx.22694	chr11	+	5317	8	NIC	ENSMUSG00000038013.15	novel	1846	4	NA	NA	-69	-1522	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	4.94046184736874	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGCTGTTTCCTTTCTGC	1352	False	NA	NA	False	NA	NA	NA	98754873	98794344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_98754967_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
tx.22695	chr11	-	574	2	ISM	ENSMUSG00000019761.11	ENSMUST00000103131.5	2094	8	3243	0	-24	0	3prime_fragment	FALSE	canonical	3	82	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCAGAATTATTATTTA	8315	False	NA	NA	False	NA	NA	NA	99276947	99276079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_99276463_99276756
tx.22696	chr11	-	1507	9	NNC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-1450	3	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_8	27.8632262130572	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATCATTTGTCCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	100162147	100153704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235_100160370_100161862
tx.22697	chr11	+	2137	12	FSM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	101	2	-2	-2	multi-exon	FALSE	canonical	2	3	junction_1	9.12538915733062	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTTGAGTGACACTGT	NA	False	NA	NA	False	NA	NA	NA	100436533	100462787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100436735_100440628_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
tx.22698	chr11	+	3412	5	NIC	ENSMUSG00000006784.15	novel	2240	12	NA	NA	3605	-1	intron_retention	FALSE	canonical	3	29	junction_1	1.87082869338697	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTGAGTGACACTGTG	2027	False	NA	NA	False	NA	NA	NA	100443977	100462788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681
tx.22699	chr11	-	3046	18	FSM	ENSMUSG00000020918.15	ENSMUST00000103118.4	3046	18	-2	2	-2	-2	multi-exon	FALSE	canonical	3	120	junction_10	104.829867108865	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATTGTTTTTTGGGG	6777	False	NA	NA	False	NA	NA	NA	100603293	100595573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
tx.227	chr1	-	5091	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	245	49	-21	-49	multi-exon	FALSE	canonical	3	38	junction_11	7.4512187699077	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTTCTTGGGTCATT	NA	False	NA	NA	False	NA	NA	NA	43131644	43086428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
tx.2270	chr10	+	2174	12	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-31	-114	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	18.002295537739	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGGGCTTTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	128541017	128555993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_128541154_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
tx.22700	chr11	+	1895	3	ISM	ENSMUSG00000004043.15	ENSMUST00000107357.4	3605	18	20248	-1	1713	0	3prime_fragment	FALSE	canonical	3	8	junction_1	15.5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTGCTTCCTGGTTTA	NA	False	NA	NA	False	NA	NA	NA	100771557	100775995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_100772012_100772887_100772993_100774659
tx.22701	chr11	+	3990	21	NNC	ENSMUSG00000019302.17	novel	2716	21	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	54.8396526247204	12	2	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGCCTGTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	100900307	100954540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945837_100945970_100946259_100946432_100953137
tx.22702	chr11	-	1038	7	NIC	ENSMUSG00000019303.15	novel	1030	7	NA	NA	5	-9	intron_retention	FALSE	canonical	3	23	junction_5	148.134698463557	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAACCTCCCAGATAT	NA	False	NA	NA	False	NA	NA	NA	100986221	100982966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984641_100985761_100985852_100985983
tx.22703	chr11	-	3041	13	FSM	ENSMUSG00000035172.16	ENSMUST00000043397.14	3056	13	15	0	15	0	multi-exon	FALSE	canonical	3	20	junction_4	15.6142740963375	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	706	False	NA	NA	False	NA	NA	NA	101062162	101053504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
tx.22704	chr11	-	3774	18	NNC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	36.9580328720513	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2628	False	NA	NA	False	NA	NA	NA	101117266	101081940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101109519_101109547_101117221
tx.22705	chr11	-	3089	8	FSM	ENSMUSG00000034685.5	ENSMUST00000049057.5	3118	8	29	0	29	0	multi-exon	FALSE	canonical	3	9	junction_1	3.01695886884898	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTCTTTCTCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	102338479	102327806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102329736_102330257_102330385_102330485_102330603_102330699_102330880_102330961_102331121_102334475_102334569_102334789_102335018_102338223
tx.22706	chr11	+	5295	26	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-19	0	intron_retention	TRUE	canonical	0	0	junction_8	7.02566722810012	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTCTCTCCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	102652245	102671088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662935_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
tx.22707	chr11	+	5094	26	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_8	7.43462171196356	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTCTCTCCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	102652268	102671088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662740_102662808_102662870_102662935_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
tx.22708	chr11	-	3626	15	NNC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	3803	762	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	7.81449464332866	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAAAAAGATTG	8995	False	NA	NA	False	NA	NA	NA	102988614	102960367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102988494
tx.22709	chr11	+	3947	26	NIC	ENSMUSG00000055805.16	novel	3806	26	NA	NA	-146	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	9.98430768756652	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCGTCGGCTCGGTGC	4902	False	NA	NA	False	NA	NA	NA	103061786	103089725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
tx.2271	chr10	+	2017	11	FSM	ENSMUSG00000025359.11	ENSMUST00000054125.9	2130	11	0	113	0	-113	multi-exon	FALSE	canonical	3	48	junction_3	12.3385574521497	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGGGCTTTTGTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	128542126	128555994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
tx.22710	chr11	-	351	2	ISM	ENSMUSG00000020940.14	ENSMUST00000021323.11	1199	10	9056	-1	9030	1	3prime_fragment	FALSE	canonical	3	22	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCGCCTAGTGGGAT	NA	False	NA	NA	False	NA	NA	NA	103090318	103089768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_103089945_103090143
tx.22711	chr11	-	3389	16	NIC	ENSMUSG00000034255.19	novel	3512	16	NA	NA	31	1	combination_of_known_junctions	TRUE	canonical	1	1	junction_15	5.57215298505783	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCGAATGTACTCTGGT	NA	False	NA	NA	False	NA	NA	NA	103247156	103222321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103247090
tx.22712	chr11	+	3192	10	NIC	ENSMUSG00000018411.18	novel	2202	13	NA	NA	7482	1696	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	200.209396555546	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104180688	104220957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_104180821_104185684_104185751_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
tx.22713	chr11	+	961	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8374	14	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	220.821619186166	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	9482	False	NA	NA	False	NA	NA	NA	104200484	104219275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_104200507_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.22714	chr11	-	5674	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-18	212	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_18	50.3843560376962	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAATCCAATGGTAA	2048	False	NA	NA	False	NA	NA	NA	104441464	104393358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
tx.22715	chr11	-	5773	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	214	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_8	36.3123027820232	45	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCAATGGTAATT	2066	False	NA	NA	False	NA	NA	NA	104441446	104393356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
tx.22716	chr11	+	2625	6	ISM	ENSMUSG00000001901.16	ENSMUST00000145539.2	2959	13	12441	-1520	6871	1035	3prime_fragment	FALSE	canonical	1	2	junction_1	1.62480768092719	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATACACACCTAGGT	9491	False	NA	NA	False	NA	NA	NA	105911469	105926410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_105911570_105914550_105914745_105916513_105916705_105917541_105917699_105918382_105918564_105924608
tx.22717	chr11	+	211	1	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGTTTTCAGGGATTC	8128	False	NA	NA	False	NA	NA	NA	106696799	106697010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_106696800_106697000
tx.22718	chr11	-	167	2	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTTTAAAATCAGGACC	9030	False	NA	NA	False	NA	NA	NA	106742082	106700874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_106700931_106741971
tx.22719	chr11	-	4434	5	ISM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	88458	2	-3251	-2	3prime_fragment	FALSE	canonical	3	44	junction_4	3.96074487943871	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAATACTGAGTTTTTA	9467	False	NA	NA	False	NA	NA	NA	106723083	106710893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745
tx.2272	chr10	-	3799	25	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-266	864	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	19.7603699920377	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCTGCATATCGACAAT	9725	False	NA	NA	False	NA	NA	NA	128580210	128555138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664_128579858_128580022
tx.22720	chr11	+	3457	27	NIC	ENSMUSG00000020728.18	novel	3395	27	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	12.235908451002	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTTTTCTTTTTACA	NA	False	NA	NA	False	NA	NA	NA	108316310	108751439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_108316477_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
tx.22721	chr11	+	1602	9	NNC	ENSMUSG00000020610.18	novel	2816	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.5692135988984	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGGCCCTAGGAAT	NA	False	NA	NA	False	NA	NA	NA	109316754	109327815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_109316785_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
tx.22722	chr11	-	5007	2	ISM	ENSMUSG00000041920.15	ENSMUST00000070152.12	4219	6	16266	3	9027	-3	3prime_fragment	FALSE	canonical	3	33	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTCTGATGTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	109348158	109341683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_109344221_109345688
tx.22723	chr11	+	3217	12	NIC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-96	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1.89823754707465	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAATGCATTGCCATGA	319	False	NA	NA	False	NA	NA	NA	109364103	109464149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_109364248_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109463044
tx.22724	chr11	+	3024	14	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	184	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	77.9692702325199	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	113540337	113553227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551790_113551879_113551965_113552045_113553032
tx.22725	chr11	+	2023	4	FSM	ENSMUSG00000051043.17	ENSMUST00000021071.14	2200	4	177	0	147	0	multi-exon	FALSE	canonical	2	8	junction_1	13.5973853695808	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	1113	False	NA	NA	False	NA	NA	NA	114742852	114759922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_114743100_114754292_114755373_114757450_114757546_114759321
tx.22726	chr11	+	3598	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	11625	24	-1025	-24	3prime_fragment	FALSE	canonical	3	28	junction_3	4.98887651569859	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGGGGTTACTGCCT	NA	False	NA	NA	False	NA	NA	NA	114754292	114763419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_114755373_114757450_114757546_114759321_114759472_114761146
tx.22727	chr11	-	3262	19	FSM	ENSMUSG00000034586.15	ENSMUST00000044152.13	3236	19	-24	-2	13	2	multi-exon	FALSE	canonical	2	4	junction_16	3.67045259092421	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTCTCTGTACATGG	8673	False	NA	NA	False	NA	NA	NA	115258569	115238530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250635_115251147_115251319_115252464_115252615_115258369
tx.22728	chr11	+	3240	3	FSM	ENSMUSG00000057219.12	ENSMUST00000136985.8	1009	3	-36	-2195	-5	686	multi-exon	FALSE	canonical	1	1	junction_2	10	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTATATATTCTCATC	NA	False	NA	NA	False	NA	NA	NA	115366487	115376798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115366854_115366947_115367092_115374068
tx.22729	chr11	-	1130	3	FSM	ENSMUSG00000020736.13	ENSMUST00000124778.8	907	3	-10	-213	1	-5	multi-exon	FALSE	canonical	3	183	junction_2	15.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGAGGCTTTGGATCTTTG	NA	False	NA	NA	False	NA	NA	NA	115382687	115381250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115382025_115382096_115382198_115382432
tx.2273	chr10	-	2857	24	FSM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	-20	-3	-20	3	multi-exon	FALSE	canonical	3	46	junction_14	14.5196561901106	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGCAAGGTTCTGAGAA	9971	False	NA	NA	False	NA	NA	NA	128579964	128555999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
tx.22730	chr11	+	3119	18	ISM	ENSMUSG00000020747.19	ENSMUST00000239299.2	5014	31	11082	8	2827	-8	3prime_fragment	FALSE	canonical	3	94	junction_4	12.1908128094486	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	NA	False	NA	NA	NA	115682606	115689851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
tx.22731	chr11	+	1718	11	ISM	ENSMUSG00000034427.18	ENSMUST00000040703.12	2825	21	3205	-1	-2806	0	3prime_fragment	TRUE	canonical	1	8	junction_3	2.35796522451032	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCACTCCTCTTG	7644	False	NA	NA	False	NA	NA	NA	115774455	115778272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887
tx.22732	chr11	+	3191	10	NIC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	100.552915864677	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTTTGGTTTTGTG	393	False	NA	NA	False	NA	NA	NA	115824456	115857547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_115824608_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
tx.22733	chr11	+	3047	16	ISM	ENSMUSG00000020758.16	ENSMUST00000068981.13	5584	38	15157	0	11	0	3prime_fragment	FALSE	canonical	3	7	junction_7	4.73568016938081	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTCTGTCCGTTCTTCA	824	False	NA	NA	False	NA	NA	NA	115883768	115899238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
tx.22734	chr11	-	5175	29	NIC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_28	9.41286570691022	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	NA	False	NA	NA	NA	116058984	116033111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116058377
tx.22735	chr11	-	1325	3	ISM	ENSMUSG00000020776.19	ENSMUST00000125980.2	1992	13	5326	-945	1670	-11	3prime_fragment	FALSE	canonical	3	46	junction_1	1.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGTTTCGACTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	116036295	116033122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_116034293_116035258_116035369_116036250
tx.22736	chr11	-	2376	19	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	3	174	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	62.4539583499737	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTCTGCTTTCATCC	8930	False	NA	NA	False	NA	NA	NA	116197550	116179714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
tx.22737	chr11	+	1763	6	FSM	ENSMUSG00000061878.17	ENSMUST00000063446.13	2527	6	760	4	-18	0	multi-exon	FALSE	canonical	0	0	junction_4	1.49666295470958	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGATCCTATCCTGGG	NA	False	NA	NA	False	NA	NA	NA	116424058	116427496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_116424195_116424795_116425000_116425674_116425828_116425905_116426001_116426077_116426194_116426437
tx.22738	chr11	-	2850	8	NIC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	8	-811	intron_retention	FALSE	canonical	3	13	junction_3	7.10848874549985	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCACATTTCCAGTC	NA	False	NA	NA	False	NA	NA	NA	116585686	116567525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116568508_116569291_116569392_116570732_116570817_116572684_116572789_116575171_116576092_116576661_116576837_116581137_116581199_116585262
tx.22739	chr11	-	2361	9	NNC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	-19	-814	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	7.76912961663017	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTTTCCACATTTCCA	NA	False	NA	NA	False	NA	NA	NA	116585713	116567528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_116568508_116569291_116569392_116570732_116570916_116572684_116572789_116575171_116575311_116575922_116576092_116576661_116576837_116581137_116581199_116585262
tx.2274	chr10	+	1173	3	FSM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	-14	-1	-14	0	multi-exon	FALSE	canonical	3	275	junction_1	26	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCAGGCTTTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	128583743	128602433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128583868_128601015_128601110_128601478
tx.22740	chr11	+	4363	18	NNC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.5302332903307	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAATTGGTGGGATTTT	1805	False	NA	NA	False	NA	NA	NA	116809685	116877767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116865017_116865133_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
tx.22741	chr11	+	3284	15	NIC	ENSMUSG00000050106.19	novel	2577	16	NA	NA	8	-8	intron_retention	FALSE	canonical	2	3	junction_3	5.31507290636732	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTATATATTTGGAAAT	7622	False	NA	NA	False	NA	NA	NA	117673130	117683928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_117674097_117674220_117674370_117674596_117674747_117674938_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681607_117681733_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
tx.22742	chr11	+	3760	3	ISM	ENSMUSG00000085434.2	ENSMUST00000125607.2	1850	4	-1969	13832	-1969	-13832	5prime_fragment	FALSE	canonical	2	10	junction_2	1.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTTGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	117760106	117764410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_117762260_117762604_117762722_117762920
tx.22743	chr11	-	2258	11	ISM	ENSMUSG00000033987.17	ENSMUST00000132685.9	13612	81	92262	1	50822	-1	3prime_fragment	FALSE	canonical	1	1	junction_10	4.2614551505325	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCGTCTGATGCACTCA	NA	False	NA	NA	False	NA	NA	NA	117929198	117913902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_117914324_117915419_117915646_117915928_117916073_117916343_117916527_117917498_117917682_117918149_117918330_117923418_117923611_117924561_117924790_117925074_117925203_117927157_117927307_117928974
tx.22744	chr11	-	4612	16	ISM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	10934	6	10775	-3	3prime_fragment	FALSE	canonical	3	124	junction_6	19.4737430060753	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	118170123	118150482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030
tx.22745	chr11	-	4710	17	ISM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	10328	6	10169	-3	3prime_fragment	FALSE	canonical	3	124	junction_6	19.0704901287303	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	118170729	118150482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641
tx.22746	chr11	-	7277	20	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	124	junction_6	17.9340126258533	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	118181018	118150482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118178650_118180782
tx.22747	chr11	-	6229	20	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	26	-3	intron_retention	FALSE	canonical	3	124	junction_6	18.0622193352041	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	118180980	118150482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118176826_118178492_118178650_118180782
tx.22748	chr11	-	2469	3	NNC	ENSMUSG00000039976.5	novel	6986	12	NA	NA	-5	3364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGGAGAGTATGTGACTAA	NA	False	NA	NA	False	NA	NA	NA	119119292	119098102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_119100265_119101330_119101567_119119221
tx.22749	chr11	+	1962	6	ISM	ENSMUSG00000039963.21	ENSMUST00000236813.2	4769	21	24403	-9	-552	9	3prime_fragment	FALSE	canonical	0	0	junction_1	4.84148737476408	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGTTAAGACACATTT	NA	False	NA	NA	False	NA	NA	NA	119143826	119156073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
tx.2275	chr10	+	1103	3	FSM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	57	-4	-16	0	multi-exon	FALSE	canonical	3	93	junction_1	117	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTCAGGCTTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	128584380	128602432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128584436_128601015_128601110_128601478
tx.22750	chr11	+	5505	29	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-19777	3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_5	23.9813650017454	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTCCTGTTTGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	119349105	119378247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
tx.22751	chr11	+	4693	4	NIC	ENSMUSG00000070327.15	novel	2422	9	NA	NA	2061	2	intron_retention	FALSE	canonical	3	132	junction_1	2.35702260395516	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTCCTGTTTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	119370943	119378246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_119373952_119374480_119374571_119374662_119374842_119376830
tx.22752	chr11	-	5507	4	ISM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	0	-4	0	4	intron_retention	FALSE	canonical	3	52	junction_3	8.17856276425687	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATTGGATTCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	119438579	119429540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477
tx.22753	chr11	+	3679	13	FSM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	330	-4	-23	4	multi-exon	FALSE	canonical	3	21	junction_12	7.16278964898143	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTGTGCCTCCGTCC	NA	False	NA	NA	False	NA	NA	NA	119833918	119893451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377
tx.22754	chr11	-	4171	6	ISM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	1680	0	1390	0	intron_retention	FALSE	canonical	1	16	junction_4	22.547727158186	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	120267910	120260387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707
tx.22755	chr11	-	3038	9	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	16	junction_4	21.8274483162829	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	120269554	120260387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269367
tx.22756	chr11	-	3348	4	FSM	ENSMUSG00000057594.13	ENSMUST00000125806.8	607	4	-119	-2622	0	1890	multi-exon	FALSE	canonical	3	126	junction_1	22.69116323349	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAAAAGTGCTGA	NA	False	NA	NA	False	NA	NA	NA	120358279	120353801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007
tx.22757	chr11	-	2436	11	NNC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-80	0	intron_retention	FALSE	canonical	2	13	junction_5	31.3521929057602	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9493	False	NA	NA	False	NA	NA	NA	120551735	120544613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547499_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820
tx.22758	chr11	-	1011	4	FSM	ENSMUSG00000025163.7	ENSMUST00000026159.6	982	4	-33	4	-33	-4	multi-exon	FALSE	canonical	3	9	junction_2	2.49443825784929	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCACTTGTTTTTGTTG	7863	False	NA	NA	False	NA	NA	NA	120930277	120927576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120927977_120928505_120928643_120928861_120929177_120930118
tx.22759	chr11	-	4578	3	FSM	ENSMUSG00000039238.7	ENSMUST00000092298.6	3232	3	0	-1346	0	1346	multi-exon	FALSE	canonical	2	4	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTACCTCTCTACATTCA	NA	False	NA	NA	False	NA	NA	NA	121410159	121400457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_121403326_121403452_121405059_121410055
tx.2276	chr10	+	3096	7	ISM	ENSMUSG00000025355.8	ENSMUST00000026411.8	3402	9	3602	-1	3601	1	3prime_fragment	FALSE	canonical	1	1	junction_5	1.89296944860009	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCCTTGTTTCAGAGTC	NA	False	NA	NA	False	NA	NA	NA	128630431	128636694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_128630526_128630688_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
tx.22760	chr11	-	2777	12	NIC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	13	-9	combination_of_known_splicesites	FALSE	canonical	2	12	junction_9	22.2443232613485	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCACAATCTTGACTATA	NA	False	NA	NA	False	NA	NA	NA	121563966	121507031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121561695_121561796_121561882_121562000_121563810
tx.22761	chr12	-	1841	3	NNC	ENSMUSG00000097429.2	novel	1423	2	NA	NA	-180	14871	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCAGGCTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	3407333	3378944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_3380193_3394825_3394948_3406862
tx.22762	chr12	+	4122	9	NIC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	14554	21	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	13.1190462686889	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAATGCAGGTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	3507059	3552487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
tx.22763	chr12	+	2280	18	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	112.136872618653	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	NA	False	NA	NA	NA	3622411	3831398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
tx.22764	chr12	+	5101	20	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	6274	1770	intron_retention	FALSE	canonical	0	0	junction_1	37.3915421428792	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGGACAGTGAACC	9060	False	NA	NA	False	NA	NA	NA	3922464	3960317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_3922705_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
tx.22765	chr12	+	4769	7	NNC	ENSMUSG00000020657.17	novel	4698	7	NA	NA	6	2	intron_retention	FALSE	canonical	0	0	junction_4	13.4866188827626	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGCTGGCTGCATTG	NA	False	NA	NA	False	NA	NA	NA	4132588	4160608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147148_4147347_4153053_4153215_4156801
tx.22766	chr12	-	7206	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	27.4107084690548	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	NA	False	NA	NA	NA	4527207	4297361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
tx.22767	chr12	+	9598	28	ISM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	13	34449	13	-5	5prime_fragment	FALSE	canonical	3	59	junction_17	12.5285955496691	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACTTGTATTGTGTATT	7399	False	NA	NA	False	NA	NA	NA	4643020	4729501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415
tx.22768	chr12	+	3505	4	FSM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	21	791	-4	-791	multi-exon	FALSE	canonical	3	7	junction_3	4.49691252107735	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	4893323	4909252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4907806
tx.22769	chr12	-	2541	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-80	-5	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	579.385635208291	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGCTGGGTGTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	4957519	4929036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4939817_4939854_4941314_4941422_4944537_4944680_4952219_4952273_4957348
tx.2277	chr10	-	5356	2	ISM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	-1142	0	-1142	0	intron_retention	FALSE	canonical	3	22	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4595	False	NA	NA	False	NA	NA	NA	128641381	128635904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_128637099_128637219
tx.22770	chr12	+	6167	21	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.0381225204078	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAAAATATCCCTCTAT	NA	False	NA	NA	False	NA	NA	NA	8724717	8802552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_8724840_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
tx.22771	chr12	+	5901	20	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-9	-25	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	42.1280201659477	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	8724726	8802532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_8724840_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
tx.22772	chr12	+	4668	11	ISM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	42003	-2958	41991	2958	3prime_fragment	FALSE	canonical	3	85	junction_1	10.675204916066	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTAAAATCATGTTTGT	8864	False	NA	NA	False	NA	NA	NA	12354180	12426354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
tx.22773	chr12	-	3832	12	ISM	ENSMUSG00000036523.17	ENSMUST00000048064.16	7940	33	60772	0	-5667	0	3prime_fragment	FALSE	canonical	1	2	junction_2	3.11222595793158	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGGTGGGTACGG	6844	False	NA	NA	False	NA	NA	NA	16746470	16720615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_16722545_16723746_16723886_16724610_16724812_16727688_16727825_16730200_16730420_16731330_16731506_16732128_16732334_16734362_16734525_16738497_16738641_16740759_16740919_16742685_16742789_16746209
tx.22774	chr12	+	2592	9	ISM	ENSMUSG00000057469.9	ENSMUST00000220794.2	2694	10	-12	12992	-12	-2	5prime_fragment	FALSE	canonical	0	0	junction_1	108.357048686276	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTGCGTGCCTGTGTT	7384	False	NA	NA	False	NA	NA	NA	16860951	16876751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_16861317_16862289_16862374_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
tx.22775	chr12	+	2493	4	Fusion	ENSMUSG00000114025.2_ENSMUSG00000113294.2	novel	1214	3	NA	NA	-350	-507	intron_retention	FALSE	canonical	1	4	junction_1	62.8348806175537	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	NA	False	NA	NA	NA	17931847	17954169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_17932324_17950611_17950788_17950987_17951049_17952389
tx.22776	chr12	+	3251	4	Fusion	ENSMUSG00000113416.2_ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-298	-1	intron_retention	FALSE	canonical	3	7	junction_3	13.5728487143349	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGGTCTGTGAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	18042835	18115610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_18043260_18074048_18074176_18111968_18113829_18114770
tx.22777	chr12	+	3108	3	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-288	-7	intron_retention	FALSE	canonical	3	7	junction_2	3.5	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	18042845	18115604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_18043260_18111968_18113829_18114770
tx.22778	chr12	+	3388	4	Genic_Genomic	ENSMUSG00000113199.2	novel	126	1	NA	NA	-290	16310	multi-exon	FALSE	canonical	3	6	junction_3	5.8878405775519	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	18185896	18202622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_18186313_18199264_18199392_18199593_18199655_18199838
tx.22779	chr12	+	3851	5	Fusion	ENSMUSG00000116815.2_ENSMUSG00000073197.10	novel	2431	4	NA	NA	-66	1699	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTTGTATTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	18564444	18701698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_18564865_18696480_18696608_18696807_18696869_18698202_18698442_18698694
tx.2278	chr10	-	2914	5	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-1006	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	11.3880419739304	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4731	False	NA	NA	False	NA	NA	NA	128641245	128635904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640528
tx.22780	chr12	+	4103	4	Fusion	ENSMUSG00000116815.2_ENSMUSG00000073197.10	novel	2431	4	NA	NA	-64	1700	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	18564446	18701699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_18564865_18696480_18696608_18696807_18696869_18698202
tx.22781	chr12	+	3780	5	Genic_Genomic	ENSMUSG00000116815.2_ENSMUSG00000113724.2	novel	1785	1	NA	NA	-301	1702	multi-exon	TRUE	canonical	0	0	junction_2	11.9869720947369	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTATTTGGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	18660083	18701701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202_18698502_18698836
tx.22782	chr12	+	3731	6	Genic_Genomic	ENSMUSG00000116815.2_ENSMUSG00000113724.2	novel	1785	1	NA	NA	-171	1700	multi-exon	FALSE	non_canonical	0	0	junction_2	11.1067547015319	6	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	18660213	18701699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202_18698706_18698789_18699174_18699341
tx.22783	chr12	+	4182	3	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	28	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGTATTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	19116395	19127637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_19116514_19123371_19123499_19123700
tx.22784	chr12	+	4084	5	Fusion	ENSMUSG00000113959.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-48	765	multi-exon	FALSE	canonical	0	0	junction_1	10.6418983268964	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTGTTGTTGCAG	NA	False	NA	NA	False	NA	NA	NA	19338514	19355957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_19338925_19339796_19339930_19350884_19351012_19351214_19351276_19352604
tx.22785	chr12	-	1725	3	Antisense	novelGene_ENSMUSG00000116705.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	2	2	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGGGTTTCTCTCCAGT	NA	False	NA	NA	False	NA	NA	NA	19459691	19456520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr12_-_19456838_19457762_19457925_19458445
tx.22786	chr12	-	6225	4	Genic_Genomic	ENSMUSG00000113411.2_ENSMUSG00000113077.2	novel	370	1	NA	NA	-196	3484	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCACTACTGATCAGT	NA	False	NA	NA	False	NA	NA	NA	19932517	19911642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_-_19917357_19918884_19918946_19919142_19919270_19932194
tx.22787	chr12	+	2526	5	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-58	-23288	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	36.2146379244636	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACACACTACTGG	NA	False	NA	NA	False	NA	NA	NA	21040478	21067141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066077_21066244
tx.22788	chr12	-	4520	5	Genic_Genomic	ENSMUSG00000112997.2	novel	126	1	NA	NA	-301	21703	multi-exon	FALSE	canonical	0	0	junction_4	19.2678488679977	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTCCTTGTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	23684777	23662647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_-_23666442_23667883_23667945_23668146_23668274_23683339_23683451_23684350
tx.22789	chr12	+	3419	15	NIC	ENSMUSG00000020656.17	novel	3469	16	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	6.88869230207396	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTCGGCTCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	24622254	24667387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24631718_24634303_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24658027_24658080_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
tx.2279	chr10	-	4647	3	FSM	ENSMUSG00000047090.14	ENSMUST00000152966.2	3156	3	-1422	-69	-1013	0	multi-exon	FALSE	canonical	3	22	junction_1	7	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4724	False	NA	NA	False	NA	NA	NA	128641252	128635904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128637099_128637219_128638387_128638966
tx.22790	chr12	+	2590	4	ISM	ENSMUSG00000020656.17	ENSMUST00000221426.2	3267	9	-8	13418	-4	-13418	intron_retention	FALSE	canonical	3	20	junction_2	3.29983164553722	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCCAGGATTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	24622277	24633478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326
tx.22791	chr12	+	6716	11	NIC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-57	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	41.3908202383089	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAACCTGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	24881550	25014391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_24881774_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
tx.22792	chr12	-	4869	8	NIC	ENSMUSG00000020642.14	novel	4812	9	NA	NA	-8	-9	intron_retention	FALSE	canonical	0	0	junction_7	13.4528655622783	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAACCCTGCCTGGCTCC	8864	False	NA	NA	False	NA	NA	NA	26465223	26356801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26465099
tx.22793	chr12	+	3224	5	FSM	ENSMUSG00000020638.9	ENSMUST00000020969.5	3200	5	-24	0	-24	0	multi-exon	FALSE	canonical	2	4	junction_3	0.433012701892219	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTCGTCATCATTGCT	NA	False	NA	NA	False	NA	NA	NA	26519178	26529836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_26520026_26521404_26521520_26523994_26524197_26527004_26527239_26528010
tx.22794	chr12	-	2914	10	ISM	ENSMUSG00000020673.15	ENSMUST00000021005.15	3299	17	29253	-685	-8372	685	3prime_fragment	FALSE	canonical	0	0	junction_8	1.64053589558149	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAGAAATCCTGACAT	NA	False	NA	NA	False	NA	NA	NA	30153370	30103972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_30105163_30124092_30124217_30125775_30125876_30128057_30128190_30134606_30134778_30142543_30142753_30144777_30145016_30148167_30148339_30150317_30150577_30153050
tx.22795	chr12	-	1708	8	NNC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	-11	-18	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	132.512764113731	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAGAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	31684668	31645377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680860_31680893_31684261_31684380_31684603
tx.22796	chr12	-	8058	3	ISM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	5127	0	5077	0	intron_retention	FALSE	canonical	3	98	junction_2	15.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTATGACTCGCCTGTA	NA	False	NA	NA	False	NA	NA	NA	31699698	31690048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_31690944_31691500_31691728_31692762
tx.22797	chr12	-	1647	12	FSM	ENSMUSG00000002997.16	ENSMUST00000003079.12	1657	12	6	4	6	0	multi-exon	FALSE	canonical	2	2	junction_1	6.20849857416868	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTTCCAAGCATGGTT	NA	False	NA	NA	False	NA	NA	NA	32111228	32008478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_32008721_32010380_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
tx.22798	chr12	+	3557	5	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	20600	-18	20134	18	3prime_fragment	FALSE	canonical	3	857	junction_2	60.3298226418742	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGATTGTGTGTATC	NA	False	NA	NA	False	NA	NA	NA	32890933	32903366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
tx.22799	chr12	+	5956	3	NIC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	-19	1693	intron_retention	FALSE	canonical	3	454	junction_2	60.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCTTTCCCTCCT	NA	False	NA	NA	False	NA	NA	NA	33479614	33489407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_33483646_33486934_33487144_33487691
tx.228	chr1	-	5588	13	FSM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	-50	69	-35	-49	multi-exon	FALSE	canonical	3	11	junction_11	15.5393765068687	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTTCTTGGGTCATT	7733	False	NA	NA	False	NA	NA	NA	43137832	43086428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
tx.2280	chr10	-	2431	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	-97	1	-97	-1	multi-exon	FALSE	canonical	3	13	junction_4	8.20060973342836	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGGAGATGCGCCTCT	5640	False	NA	NA	False	NA	NA	NA	128640336	128635905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
tx.22800	chr12	+	1486	2	FSM	ENSMUSG00000035799.7	ENSMUST00000049089.7	1628	2	148	-6	148	6	multi-exon	FALSE	canonical	3	12	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGGTCTATATTTTT	NA	False	NA	NA	False	NA	NA	NA	34007817	34009834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_34008638_34009168
tx.22801	chr12	+	8315	51	NIC	ENSMUSG00000035954.11	novel	7360	52	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_49	3.58976322338953	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTCTGCCTTTATTC	NA	False	NA	NA	False	NA	NA	NA	40496043	40896870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40891235_40891298_40894208
tx.22802	chr12	-	3801	19	FSM	ENSMUSG00000002688.9	ENSMUST00000002765.9	3653	19	-148	0	-148	0	multi-exon	FALSE	canonical	0	0	junction_18	5.99897110519693	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTCATACTAATCAA	NA	False	NA	NA	False	NA	NA	NA	50696029	50388013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50466635_50466660_50472221_50472383_50474885_50475018_50536685_50536825_50695498
tx.22803	chr12	-	7520	35	NIC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	14.1477925699409	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	NA	False	NA	NA	False	NA	NA	NA	52018073	51922653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52008215_52008428_52017985
tx.22804	chr12	-	3995	2	FSM	ENSMUSG00000062929.9	ENSMUST00000223320.2	1160	2	-1168	-1667	-29	4	multi-exon	FALSE	canonical	3	334	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTTGAGATGTGTT	NA	False	NA	NA	False	NA	NA	NA	54909691	54905597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54908023_54908121
tx.22805	chr12	-	5523	27	NIC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	10.0899064920222	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAATTCTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	55033113	54940335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974410_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
tx.22806	chr12	+	5074	6	NNC	ENSMUSG00000094103.3	novel	3863	5	NA	NA	-48	1377	intron_retention	TRUE	non_canonical	0	0	junction_5	44.2067868092672	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATACCCTTCTCACCCC	NA	False	NA	NA	False	NA	NA	NA	55246328	55265330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624_55263753_55263966
tx.22807	chr12	-	4311	13	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-2	3	intron_retention	FALSE	canonical	2	10	junction_9	78.6763765193989	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCTTAGGATCGAG	NA	False	NA	NA	False	NA	NA	NA	55349785	55325772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344591_55344676_55345195_55345301_55345678_55345807_55349378
tx.22808	chr12	-	1478	9	NNC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	21	-10	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_1	75.0598719356755	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAAACTTTTTCATGTCT	NA	False	NA	NA	False	NA	NA	NA	56392658	56375097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_56375582_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
tx.22809	chr12	-	4278	2	ISM	ENSMUSG00000020993.10	ENSMUST00000218150.2	441	4	981	213	981	-213	internal_fragment	FALSE	canonical	3	312	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTCTCCTTGATAAACAC	NA	False	NA	NA	False	NA	NA	NA	59097589	59091250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_59094993_59097053
tx.2281	chr10	+	3056	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	-120	1293	2	650	multi-exon	FALSE	canonical	3	32	junction_1	125.746658890892	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	4018	False	NA	NA	False	NA	NA	NA	128641424	128654022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
tx.22810	chr12	+	3399	8	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	4	-142	intron_retention	FALSE	canonical	3	465	junction_7	36.8189170544331	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTTTAAAATTAGTACT	NA	False	NA	NA	False	NA	NA	NA	59113732	59120642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115978_59116927_59117084_59117164_59117304_59118211
tx.22811	chr12	-	6052	4	ISM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	8082	-4	5918	4	3prime_fragment	FALSE	canonical	3	14	junction_1	3.29983164553722	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATGTAATCATTATTAT	NA	False	NA	NA	False	NA	NA	NA	65004226	64985602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612
tx.22812	chr12	+	2006	3	Genic_Genomic	ENSMUSG00000113600.2	novel	680	1	NA	NA	-2930	1226	multi-exon	FALSE	canonical	1	6	junction_1	0.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAACGTCTTAGAACTTT	7656	False	NA	NA	False	NA	NA	NA	69166944	69171780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_69166981_69167192_69167219_69169836
tx.22813	chr12	-	1895	5	ISM	ENSMUSG00000049882.11	ENSMUST00000238784.2	875	6	102	843	7	-843	5prime_fragment	FALSE	canonical	3	55	junction_3	53.5741308842243	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTCGGTTTTTAGTC	NA	False	NA	NA	False	NA	NA	NA	69629782	69625467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
tx.22814	chr12	-	4779	18	ISM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	-181	10394	-170	-841	5prime_fragment	FALSE	canonical	3	46	junction_1	6.90468974570393	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTTGTGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	69728796	69642020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
tx.22815	chr12	-	186	2	Antisense	novelGene_ENSMUSG00002075260.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTATTTGATACCCCT	NA	False	NA	NA	False	NA	NA	NA	69991454	69858232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr12_-_69858274_69991309
tx.22817	chr12	-	3687	3	FSM	ENSMUSG00000021067.9	ENSMUST00000220735.2	3360	3	-288	-39	-288	3	multi-exon	FALSE	canonical	3	149	junction_1	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCCTTGAATGCATGT	NA	False	NA	NA	False	NA	NA	NA	70024945	70011782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_70013122_70015843_70015988_70022741
tx.22818	chr12	-	4620	29	NIC	ENSMUSG00000021068.18	novel	7183	30	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_28	9.10791313269143	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	70158758	70065512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_70066037_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
tx.22819	chr12	-	2590	13	ISM	ENSMUSG00000021068.18	ENSMUST00000021468.14	6708	30	69263	1	-7411	-1	3prime_fragment	FALSE	canonical	3	23	junction_2	7.1336448530109	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTCTTCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	70089436	70065514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905
tx.2282	chr10	+	3023	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	4	1106	4	650	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	612	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	4020	False	NA	NA	False	NA	NA	NA	128641426	128654022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
tx.22820	chr12	-	918	3	FSM	ENSMUSG00000085622.10	ENSMUST00000136690.3	1063	3	236	-91	0	91	multi-exon	FALSE	canonical	3	10	junction_2	2	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTGTTTTCTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	71062370	71056477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_71057254_71061229_71061282_71062280
tx.22821	chr12	+	5299	23	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	628	0	-90	0	3prime_fragment	FALSE	canonical	3	75	junction_4	14.2826398698872	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGTTAATTCACTCTT	124	False	NA	NA	False	NA	NA	NA	71063391	71145366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
tx.22822	chr12	-	2996	3	ISM	ENSMUSG00000021079.17	ENSMUST00000166120.9	990	6	7931	-2	7880	1	3prime_fragment	FALSE	canonical	3	274	junction_1	18.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	NA	False	NA	NA	NA	71175491	71169945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_71170461_71172235_71172332_71173106
tx.22823	chr12	+	766	3	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCCTTAGTGAAGTC	NA	False	NA	NA	False	NA	NA	NA	72099695	72104965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_72099854_72100646_72100796_72104506
tx.22824	chr12	-	2008	5	ISM	ENSMUSG00000021098.15	ENSMUST00000044000.12	2051	18	46	30552	-3	-2	5prime_fragment	FALSE	canonical	3	18	junction_2	8.16624148553054	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTATGGGTATTTTGC	NA	False	NA	NA	False	NA	NA	NA	72964634	72958434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964481
tx.22825	chr12	+	6698	2	FSM	ENSMUSG00000021057.16	ENSMUST00000154078.3	6685	2	-16	3	-16	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACTGTGTCTTTAAAAC	515	False	NA	NA	False	NA	NA	NA	76371648	76380922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_76371764_76374339
tx.22826	chr12	-	3281	3	NIC	ENSMUSG00000056459.15	novel	1672	3	NA	NA	24	544	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	31	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76416352	76394011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_76396974_76402662_76402843_76416213
tx.22827	chr12	+	2456	2	FSM	ENSMUSG00000059970.8	ENSMUST00000080449.7	2524	2	68	0	68	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCTGGCGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	76451017	76453712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_76451064_76451302
tx.22828	chr12	+	6781	17	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	1	-20	intron_retention	FALSE	canonical	3	24	junction_13	13.9012982757007	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACAGAGACAAACAC	7225	False	NA	NA	False	NA	NA	NA	76580334	76627242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630
tx.22829	chr12	-	5876	19	ISM	ENSMUSG00000021061.16	ENSMUST00000021458.13	10394	36	89288	15645	-37173	-3	internal_fragment	FALSE	canonical	2	10	junction_14	4.84353967086158	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTTCTCTGGGGGAG	669	False	NA	NA	False	NA	NA	NA	76668033	76642906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_76644576_76645058_76645109_76645367_76645565_76646598_76646684_76647096_76647236_76648633_76648879_76650162_76650538_76650795_76651001_76652262_76652394_76653019_76653299_76654755_76654846_76655264_76655472_76655814_76656079_76657517_76657665_76658586_76658678_76658769_76658973_76659337_76660095_76665812_76665951_76667429
tx.2283	chr10	+	2861	6	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	527	-649	323	649	3prime_fragment	FALSE	canonical	3	291	junction_2	34.2776895370735	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTCCTTCTCTTCTTT	4665	False	NA	NA	False	NA	NA	NA	128642071	128654021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
tx.22830	chr12	+	1926	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	-25	69706	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	2.86744175568088	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATAATTGGTTTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	77600095	77686189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_77600570_77616271_77616542_77684209_77684294_77685091
tx.22831	chr12	+	3827	21	NNC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	-174	-8846	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	18.2682100929456	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGAATTATAGCAATTT	NA	False	NA	NA	False	NA	NA	NA	78272978	78722021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78720751
tx.22832	chr12	+	2731	20	NIC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	53	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	17.7922763285901	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGTGCGGCCT	NA	False	NA	NA	False	NA	NA	NA	78273479	78731541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
tx.22833	chr12	+	3139	22	NIC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	17.5868431548756	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGTGCGGCCT	NA	False	NA	NA	False	NA	NA	NA	78273479	78731541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
tx.22834	chr12	+	6390	29	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_27	29.6041916502597	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGTGTGTTGTGGAT	6138	False	NA	NA	False	NA	NA	NA	79075949	79128424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125764_79125881_79126211
tx.22835	chr12	-	4973	4	Antisense	novelGene_ENSMUSG00000059060.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGATTTCTAGGAT	NA	False	NA	NA	False	NA	NA	NA	79854564	79831772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr12_-_79836364_79839576_79839773_79840773_79840832_79854436
tx.22836	chr12	+	5052	7	FSM	ENSMUSG00000021133.10	ENSMUST00000220238.2	2127	7	35	-2960	-14	-2	multi-exon	FALSE	canonical	1	6	junction_2	21.4689698557399	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAGATGTAGTCCTTC	3445	False	NA	NA	False	NA	NA	NA	80837318	80927607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80837590_80874799_80875018_80897987_80898051_80915200_80915399_80916848_80916985_80920922_80921351_80923869
tx.22837	chr12	-	4418	12	NNC	ENSMUSG00000042724.9	novel	3303	12	NA	NA	10	-265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5325538820971	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTATCTGTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	81827939	81768048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_81769298_81770837_81771651_81772495_81772609_81772975_81773105_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
tx.22838	chr12	+	7275	31	NIC	ENSMUSG00000021140.10	novel	12139	36	NA	NA	-879	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11.5902257671425	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTCTATGTGGCTCT	5347	False	NA	NA	False	NA	NA	NA	81964537	82043894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_81966155_81975015_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
tx.22839	chr12	+	3260	3	FSM	ENSMUSG00000043487.5	ENSMUST00000056822.4	3388	3	133	-5	-45	5	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTGCTGCTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	84147560	84158128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84148203_84153216_84153420_84155713
tx.2284	chr10	-	2103	3	ISM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	-8	-63	-8	63	intron_retention	FALSE	canonical	3	748	junction_2	69	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTCTCTACTCCT	NA	False	NA	NA	False	NA	NA	NA	128657483	128654287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_128654885_128655822_128655975_128656129
tx.22840	chr12	+	5698	8	FSM	ENSMUSG00000042523.13	ENSMUST00000123491.8	5727	8	-43	72	-43	-72	multi-exon	FALSE	canonical	2	7	junction_1	4.44007721940573	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTCTGAATGTTATTT	9869	False	NA	NA	False	NA	NA	NA	84161096	84190219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84161174_84168056_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84185127
tx.22841	chr12	-	2244	7	ISM	ENSMUSG00000021234.10	ENSMUST00000065536.9	3000	9	5643	4	-1335	-4	3prime_fragment	FALSE	canonical	2	6	junction_1	3.1446603773522	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTTTGAGATATTTTT	6048	False	NA	NA	False	NA	NA	NA	84402964	84392086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_84393184_84393560_84393710_84395050_84395151_84395379_84395545_84400573_84400702_84401483_84401822_84402697
tx.22842	chr12	-	3002	9	FSM	ENSMUSG00000021234.10	ENSMUST00000065536.9	3000	9	-7	5	-7	3	multi-exon	FALSE	canonical	1	2	junction_7	4.82020487116471	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGTTTGAGATATTTT	398	False	NA	NA	False	NA	NA	NA	84408614	84392087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84393184_84393560_84393710_84395050_84395151_84395379_84395545_84400573_84400702_84401483_84401822_84402697_84403252_84404301_84404625_84408465
tx.22843	chr12	-	5067	17	NNC	ENSMUSG00000021236.17	novel	4972	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	16.7349512622535	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTTTCCTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	84455791	84420651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432370_84432481_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
tx.22844	chr12	+	2194	12	FSM	ENSMUSG00000057265.14	ENSMUST00000081828.13	2187	12	-7	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_6	1.49931113658824	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCTGATCATTGTTT	4336	False	NA	NA	False	NA	NA	NA	84455837	84480554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84456030_84457810_84458040_84460037_84460104_84461347_84461492_84466747_84466829_84470206_84470278_84471909_84472055_84473481_84473976_84475116_84475219_84476778_84476854_84476992_84477108_84480074
tx.22845	chr12	+	1586	2	FSM	ENSMUSG00000021241.8	ENSMUST00000222166.2	1588	2	2	0	1	0	multi-exon	FALSE	canonical	3	86	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820052	84821862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84820146_84820369
tx.22846	chr12	-	5359	20	NIC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	20	0	intron_retention	FALSE	canonical	3	7	junction_19	21.533971100504	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTAAATGAGTGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	85017654	84964921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017471
tx.22847	chr12	+	4618	13	ISM	ENSMUSG00000021244.16	ENSMUST00000164558.8	5416	17	14229	12235	-13297	-1079	internal_fragment	FALSE	canonical	3	85	junction_1	16.8149652261179	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTGAGTCTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	85075703	85105031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
tx.22848	chr12	+	4486	14	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	3	860	intron_retention	FALSE	canonical	3	294	junction_6	23.4056079862733	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGTCTTAAGTGGTACAA	NA	False	NA	NA	False	NA	NA	NA	85157613	85182479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
tx.22849	chr12	-	2883	5	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10810	-2	-465	2	intron_retention	FALSE	canonical	3	138	junction_4	9.5655632348545	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTGCATCATTAATATA	626	False	NA	NA	False	NA	NA	NA	85187228	85182020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851
tx.2285	chr10	-	998	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	30	-304	-9	63	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTCTCTACTCCT	NA	False	NA	NA	False	NA	NA	NA	128657484	128654287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
tx.22850	chr12	-	5583	12	NNC	ENSMUSG00000021245.16	novel	5463	12	NA	NA	0	55	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	24.7105558465999	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCAGAATGCATCATTT	NA	False	NA	NA	False	NA	NA	NA	85317373	85281238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317247
tx.22851	chr12	+	4140	4	NIC	ENSMUSG00000034157.13	novel	4098	4	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	46.6976087896015	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTCTATTTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	86994148	87012137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_86994274_86999517_86999779_87007045_87007216_87008553
tx.22852	chr12	-	7174	7	NNC	ENSMUSG00000034111.7	novel	7409	6	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.26312882106017	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7827	False	NA	NA	False	NA	NA	NA	87247146	87213010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_87219406_87220821_87220880_87221032_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
tx.22853	chr12	+	2284	11	FSM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	-79	-6	-5	0	multi-exon	FALSE	canonical	2	6	junction_1	20.9752234791432	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTCCTTCTCAATCATT	NA	False	NA	NA	False	NA	NA	NA	88327579	88428494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_88327743_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
tx.22854	chr12	-	2319	5	ISM	ENSMUSG00000021003.11	ENSMUST00000221063.2	1619	12	29021	-1496	2084	-6	3prime_fragment	FALSE	canonical	3	22	junction_3	3.90512483795333	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCTTTGAGAATTTG	NA	False	NA	NA	False	NA	NA	NA	98180703	98168558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591
tx.22855	chr12	-	4898	7	NIC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	17	1967	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	38.9615194775563	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTGGCTGTTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	99359314	99159385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
tx.22856	chr12	-	4715	2	ISM	ENSMUSG00000033713.13	ENSMUST00000222458.2	617	4	79830	-2324	79829	1007	3prime_fragment	FALSE	canonical	3	94	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	99177707	99160345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_99163073_99175719
tx.22857	chr12	-	4068	7	NIC	ENSMUSG00000033713.13	novel	2611	6	NA	NA	-327	983	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.5890653036285	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99530168	99160369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99416283_99416369_99529729
tx.22858	chr12	-	4712	5	ISM	ENSMUSG00000021176.7	ENSMUST00000223114.2	1122	7	991	131697	0	25217	internal_fragment	FALSE	canonical	3	69	junction_1	8.5146931829632	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTCTTAGTCAACTT	NA	False	NA	NA	False	NA	NA	NA	99849680	99816631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
tx.22859	chr12	+	2203	11	ISM	ENSMUSG00000021177.17	ENSMUST00000151019.8	3945	14	-6	24254	-6	529	5prime_fragment	FALSE	canonical	3	362	junction_1	49.4125490133832	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGGTAGTGTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	99850769	99879367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533
tx.2286	chr10	-	1077	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-20	516	-8	64	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTCTCTACTCCTT	NA	False	NA	NA	False	NA	NA	NA	128657483	128654286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
tx.22860	chr12	-	2875	2	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCGGCTCCGGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	100147235	100144219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_-_100146935_100147075
tx.22861	chr12	-	5555	16	NIC	ENSMUSG00000021180.10	novel	5642	17	NA	NA	15	0	combination_of_known_splicesites	TRUE	canonical	1	4	junction_15	9.65539572812356	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACTCAAGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	100691364	100514697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100691039
tx.22862	chr12	-	10798	30	NIC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	13	-1	intron_retention	FALSE	canonical	3	38	junction_5	24.7293554827487	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCCCTGGTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	100995302	100877782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
tx.22863	chr12	-	329	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	193	-11	193	3	multi-exon	FALSE	canonical	3	411	junction_2	787	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAAAGTGTGATTCTT	NA	False	NA	NA	False	NA	NA	NA	101941993	101934357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_101934470_101935751_101935894_101941918
tx.22864	chr12	-	8211	12	FSM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	-54	0	11	0	multi-exon	TRUE	canonical	3	7	junction_10	26.1040511722473	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTGAGTTGGACATAGTC	NA	False	NA	NA	False	NA	NA	NA	102844719	102747055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102807297_102807451_102844474
tx.22865	chr12	+	3816	25	FSM	ENSMUSG00000021209.13	ENSMUST00000021631.12	3964	25	147	1	-140	-1	multi-exon	FALSE	canonical	0	0	junction_4	1.55232800084976	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTGTATTTGTGAGAAA	NA	False	NA	NA	False	NA	NA	NA	103498688	103580089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_103499002_103500329_103500404_103524626_103524730_103542539_103542688_103543093_103543168_103545250_103545358_103547637_103547746_103550314_103550437_103551965_103552089_103553209_103553380_103553695_103553816_103557037_103557116_103557785_103557870_103559254_103559438_103562649_103562756_103564359_103564508_103566622_103566768_103567621_103567664_103567746_103567822_103569209_103569280_103570230_103570318_103571225_103571320_103573159_103573231_103576791_103576940_103579066
tx.22866	chr12	+	1901	5	Fusion	ENSMUSG00000079014.5_ENSMUSG00000041481.18	novel	1945	5	NA	NA	2	-1	multi-exon	FALSE	canonical	3	6	junction_3	8.25757228245687	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTTCACAGAACTTCC	NA	False	NA	NA	False	NA	NA	NA	104202505	104235630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_104202578_104230560_104230695_104231352_104231972_104233917_104234066_104234702
tx.22867	chr12	-	3222	11	ISM	ENSMUSG00000021097.16	ENSMUST00000109937.9	3529	14	-126	2794	-59	2	5prime_fragment	FALSE	canonical	3	35	junction_4	8.43563868358526	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGCCTCTTTGTGAAA	NA	False	NA	NA	False	NA	NA	NA	104831394	104740532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
tx.22868	chr12	-	532	2	FSM	ENSMUSG00000113722.2	ENSMUST00000222812.2	527	2	-8	3	-6	-3	multi-exon	FALSE	canonical	3	45	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGTGTCTCGTCTA	8330	False	NA	NA	False	NA	NA	NA	104998544	104996878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_104997085_104998218
tx.22869	chr12	+	3005	2	ISM	ENSMUSG00000097929.10	ENSMUST00000180503.3	2876	4	149	-1	149	1	intron_retention	FALSE	canonical	3	32	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATTTTATCTAATTTAT	NA	False	NA	NA	False	NA	NA	NA	105303400	105350190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_105303819_105347603
tx.2287	chr10	+	914	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	16	-12	2	0	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	1079	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	128657778	128713498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
tx.22870	chr12	-	3282	13	ISM	ENSMUSG00000041341.11	ENSMUST00000221015.2	3687	21	7424	-413	7424	413	3prime_fragment	FALSE	canonical	3	63	junction_11	8.19001763666531	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACAAAACCCAGTCTTG	8996	False	NA	NA	False	NA	NA	NA	105605664	105581981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460
tx.22871	chr12	+	172	2	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTTAAAAAGAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	105731375	105732049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_105731502_105732003
tx.22872	chr12	+	3401	2	ISM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	60299	-3098	39810	892	3prime_fragment	FALSE	canonical	3	439	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGTTTTTTTTTTTTG	6071	False	NA	NA	False	NA	NA	NA	106036785	106044577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_106036875_106041265
tx.22873	chr12	+	2659	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.6713610367747	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTGGTCATGGTGTT	4862	False	NA	NA	False	NA	NA	NA	108860209	108994380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_108860252_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
tx.22874	chr12	+	2613	6	ISM	ENSMUSG00000040877.17	ENSMUST00000047115.9	4356	8	3591	3	3591	1	3prime_fragment	FALSE	canonical	3	34	junction_1	15.1208465371486	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCCGTGGTCATG	8486	False	NA	NA	False	NA	NA	NA	108863833	108994375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
tx.22875	chr12	-	2821	7	FSM	ENSMUSG00000040867.14	ENSMUST00000190647.3	2707	7	-109	-5	-109	5	multi-exon	FALSE	canonical	2	2	junction_1	3.3870669054836	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTTTGCATTGTTTC	NA	False	NA	NA	False	NA	NA	NA	109034252	108998107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_109000278_109001253_109001338_109002921_109003030_109003578_109003646_109004777_109004940_109018759_109018789_109034051
tx.22876	chr12	+	2514	4	NIC	ENSMUSG00000097391.9	novel	1300	8	NA	NA	2281	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	23.7954243967663	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGCTTGCGTGTCTGT	702	False	NA	NA	False	NA	NA	NA	109706494	109715889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_109708250_109708495_109708725_109714558_109714728_109715528
tx.22877	chr12	+	3620	2	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGAACATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	109915272	109919716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_109918700_109919523
tx.22878	chr12	-	2668	2	ISM	ENSMUSG00000113581.2	ENSMUST00000222401.2	1380	4	-931	0	-931	0	intron_retention	FALSE	canonical	3	10	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACGTGTACAGTGTGGAC	NA	False	NA	NA	False	NA	NA	NA	110245537	110241821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_110242012_110243059
tx.22879	chr12	-	1604	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1838	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	74.9526572340586	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9510	False	NA	NA	False	NA	NA	NA	110805523	110774231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
tx.2288	chr10	+	886	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	184	-7	-39	0	multi-exon	FALSE	canonical	3	3700	junction_1	227.971623726484	965	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	538	False	NA	NA	False	NA	NA	NA	128745751	128748691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
tx.22880	chr12	+	5085	13	NNC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.3901847788988	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATGCATCGCTATGTCC	NA	False	NA	NA	False	NA	NA	NA	111005778	111082330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307_111078398_111078997
tx.22881	chr12	-	193	2	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	338	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGAGATGGCTCAGTG	3845	False	NA	NA	False	NA	NA	NA	111534747	111516199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_-_111516343_111534697
tx.22882	chr12	+	1343	8	NNC	ENSMUSG00000021286.9	novel	794	8	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_6	286.13568923338	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	False	NA	NA	False	NA	NA	NA	111780619	111794820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793979_111794120_111794251
tx.22883	chr12	+	6919	16	FSM	ENSMUSG00000021294.8	ENSMUST00000128402.3	6918	16	-3	2	-3	-2	multi-exon	FALSE	canonical	1	1	junction_13	3.04776785350999	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGTTCTGACTTTCCG	2023	False	NA	NA	False	NA	NA	NA	112112638	112148179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112112841_112113147_112113391_112123681_112124108_112129784_112129976_112135201_112135392_112139004_112139218_112139774_112139869_112140171_112140435_112140534_112140719_112140868_112141032_112141207_112141371_112141919_112144834_112145576_112145783_112145913_112145935_112146228_112146380_112146884
tx.22884	chr12	+	3477	2	FSM	ENSMUSG00000037638.6	ENSMUST00000169593.2	3478	2	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGGCTGTGATGATTCT	346	False	NA	NA	False	NA	NA	NA	112645273	112649180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112645380_112645809
tx.22885	chr12	+	2996	4	NIC	ENSMUSG00000037594.12	novel	1960	5	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	27	junction_1	4.32049379893857	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTTTTTGTTGAC	3925	False	NA	NA	False	NA	NA	NA	112772580	112779867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_112774631_112775802_112775933_112778082_112778200_112779168
tx.22886	chr12	-	5026	25	NIC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	8.70344759276461	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGGCCTCCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	112893430	112871438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
tx.22887	chr12	+	2107	4	ISM	ENSMUSG00000002803.15	ENSMUST00000165079.8	1975	5	8	-8	3	-7	intron_retention	FALSE	canonical	3	10	junction_1	18.3726850393609	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAATGTAGATAAGTGA	NA	False	NA	NA	False	NA	NA	NA	112940109	112942558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_112940133_112940295_112940603_112940678_112940770_112940872
tx.22888	chr12	+	5846	5	NIC	ENSMUSG00000021143.11	novel	4035	9	NA	NA	-1286	7	intron_retention	FALSE	canonical	3	85	junction_4	12.7156399760295	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGAATGTGTTGGGG	6756	False	NA	NA	False	NA	NA	NA	113030135	113038013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
tx.22889	chr12	+	466	6	NNC	ENSMUSG00000006360.12	novel	445	5	NA	NA	-206	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	164.865278333553	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTGTGTTTTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	113115425	113117497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_113115517_113115701_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
tx.2289	chr10	-	728	3	ISM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	471	-1	-27	1	3prime_fragment	FALSE	canonical	3	559	junction_1	44.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGTTTGAAGGAGT	NA	False	NA	NA	False	NA	NA	NA	128758922	128755781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_128755977_128756427_128756561_128758522
tx.22890	chr12	+	4342	5	NIC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	-35	-600	intron_retention	FALSE	canonical	3	190	junction_3	17.3114846272641	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	NA	NA	NA	113120005	113129068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_113120192_113120294_113121788_113124922_113125010_113125332_113125513_113126672
tx.22891	chr12	+	3370	5	ISM	ENSMUSG00000041992.10	ENSMUST00000220781.2	1078	9	-17	71601	-17	-23473	5prime_fragment	FALSE	canonical	3	20	junction_4	5.21416340365355	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGTCCACAGTGTCC	NA	False	NA	NA	False	NA	NA	NA	117497490	117550389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662
tx.22892	chr13	+	3324	3	NIC	ENSMUSG00000097709.9	novel	442	4	NA	NA	-19	23	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	16	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAACTTTTCAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	3528210	3538081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_3528391_3529908_3530002_3535030
tx.22893	chr13	-	4097	14	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	42.6016362160425	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	9815000	9734871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
tx.22894	chr13	-	4146	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	43.1802108869896	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	9815214	9734871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
tx.22895	chr13	-	2704	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099820.10	2736	10	41	-9	31	0	multi-exon	FALSE	canonical	0	0	junction_5	22.4152725712726	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTCTCTGGAATAGT	NA	False	NA	NA	False	NA	NA	NA	12476343	12454295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
tx.22896	chr13	-	4440	6	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	0	-4	intron_retention	FALSE	canonical	3	25	junction_1	81.2659830433374	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTGTCAACTGGTGC	NA	False	NA	NA	False	NA	NA	NA	13568199	13532208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_13534009_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567709
tx.22897	chr13	-	4568	8	NNC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-43	0	intron_retention	FALSE	canonical	3	23	junction_4	69.6806124765134	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAGACTACAGCTCT	NA	False	NA	NA	False	NA	NA	NA	13568252	13532228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539682_13539762_13539781_13542173_13542397_13548943_13548994_13567709
tx.22898	chr13	-	3533	6	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-11	-2	intron_retention	FALSE	canonical	1	10	junction_5	85.0256431907457	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCATTTTGTAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	13568160	13533202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13567709
tx.22899	chr13	+	1844	6	NNC	ENSMUSG00000021319.8	novel	1764	6	NA	NA	-23	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.4988887516808	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAAGATCTTCATGTGT	NA	False	NA	NA	False	NA	NA	NA	19807250	19816988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235_19814300_19816351
tx.229	chr1	-	4196	12	ISM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	-53	3186	-38	-3166	5prime_fragment	FALSE	canonical	3	11	junction_10	16.1260530439677	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACCAAATCTCCAATCTG	7730	False	NA	NA	False	NA	NA	NA	43137835	43089545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
tx.2290	chr10	-	539	4	FSM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	12	-1	12	1	multi-exon	FALSE	canonical	3	559	junction_1	37.4788829431544	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGTTTGAAGGAGT	NA	False	NA	NA	False	NA	NA	NA	128759381	128755781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128755977_128756427_128756561_128758522_128758596_128759243
tx.22900	chr13	+	3729	3	ISM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	9	2462	-3	3	intron_retention	FALSE	canonical	3	44	junction_1	9.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATACTGTCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	21546998	21553997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_21547043_21547749_21548222_21550784
tx.22901	chr13	+	2410	4	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.3144274623924	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCTGTATACTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	21547017	21553994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_21547541_21547749_21548222_21550784_21550927_21552721
tx.22902	chr13	-	3992	4	FSM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	-69	-5	1	5	multi-exon	FALSE	canonical	1	2	junction_2	8.64098759787715	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGAGGATAGTTAAGT	NA	False	NA	NA	False	NA	NA	NA	21637899	21626344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_21630000_21631955_21632065_21633610_21633687_21637747
tx.22903	chr13	-	5039	6	NNC	ENSMUSG00000046351.12	novel	815	5	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	51.1366795949835	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTCCATTTTTGTCTC	9006	False	NA	NA	False	NA	NA	NA	23553378	23537282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_23541884_23543467_23543598_23546749_23546825_23546972_23547046_23552289_23552376_23553304
tx.22904	chr13	-	5238	36	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-227	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	32.6455797551678	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGACTTCTTCCAGTTC	NA	False	NA	NA	False	NA	NA	NA	24465005	24196465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_24197444_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
tx.22905	chr13	+	5954	5	NIC	ENSMUSG00000035958.4	novel	1771	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	768	junction_3	42.2337246759033	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGACTTTTTTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	25015663	25026135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
tx.22906	chr13	+	2829	19	ISM	ENSMUSG00000021340.14	ENSMUST00000021773.13	5224	26	15606	1741	2904	-1741	3prime_fragment	FALSE	canonical	0	0	junction_4	1.63771144144263	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGGGTATTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	25142740	25174743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_25142948_25146302_25146411_25146609_25146638_25146720_25146861_25150620_25150684_25152293_25152418_25155374_25155515_25159581_25159769_25163361_25163473_25163654_25163730_25163820_25163978_25164939_25165082_25166490_25166600_25166680_25166775_25168010_25168191_25168690_25168852_25170874_25170902_25170991_25171043_25174018
tx.22907	chr13	-	3904	2	Genic_Genomic	ENSMUSG00000076431.5	novel	4795	1	NA	NA	16	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCATCCTT	NA	False	NA	NA	False	NA	NA	NA	29137680	29132901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr13_-_29134873_29135747
tx.22908	chr13	+	1224	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	-63	0	-63	0	multi-exon	FALSE	canonical	3	16	junction_7	7.4258236676383	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	30843918	30895214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
tx.22909	chr13	+	4054	9	Fusion	ENSMUSG00000091462.3_ENSMUSG00000021408.16	novel	3266	11	NA	NA	-8	133	multi-exon	FALSE	canonical	0	0	junction_8	13.9008767709091	3	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCATGTTGGCATCTC	NA	False	NA	NA	False	NA	NA	NA	34186374	34219152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34216478
tx.2291	chr10	-	911	2	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	130378129	130363809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_-_130364392_130377800
tx.22910	chr13	+	1422	8	NNC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.1196483593237	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	False	NA	NA	False	NA	NA	NA	34221601	34258057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34241794_34241986_34244416_34244549_34247892_34248017_34257658
tx.22911	chr13	+	9682	24	FSM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	-90	0	-90	0	multi-exon	FALSE	canonical	2	11	junction_1	5.11863048791702	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGTGTTTTGATTTCT	6406	False	NA	NA	False	NA	NA	NA	38335179	38382553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_38335771_38348739_38348843_38351491_38351641_38352581_38352757_38356754_38356884_38357793_38357845_38359043_38359206_38360371_38360477_38361162_38361259_38362409_38362536_38363023_38363177_38365073_38365229_38366177_38366305_38367090_38367293_38367921_38368149_38369071_38369239_38369548_38369688_38370570_38370765_38371716_38371880_38372425_38372510_38373521_38373630_38374370_38374470_38375336_38377632_38378671
tx.22912	chr13	+	2504	10	NNC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-1	73	intron_retention	FALSE	non_canonical	0	0	junction_5	86.287775767565	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAATTGTACACTACACA	NA	False	NA	NA	False	NA	NA	NA	38388919	38411029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38398644_38399033_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
tx.22913	chr13	+	3950	3	ISM	ENSMUSG00000021431.16	ENSMUST00000223680.2	6689	8	12818	7	1833	-7	3prime_fragment	FALSE	canonical	3	213	junction_2	17	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTAAGTTGTTTGAAG	NA	False	NA	NA	False	NA	NA	NA	38401744	38411632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_38404753_38405210_38405370_38410849
tx.22914	chr13	-	1665	4	NIC	ENSMUSG00000038982.11	novel	5634	5	NA	NA	-1	-3863	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	34.6538437823121	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTATTTGAGATTTC	NA	False	NA	NA	False	NA	NA	NA	38819038	38786679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_38788005_38803065_38803196_38814968_38815052_38818911
tx.22915	chr13	-	1584	9	FSM	ENSMUSG00000021432.16	ENSMUST00000224645.2	802	9	-38	-744	-8	-26	multi-exon	FALSE	canonical	3	22	junction_7	12.4473892845046	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATTAATAAAATTTGTTA	NA	False	NA	NA	False	NA	NA	NA	39144521	39116141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139796_39139913_39144407
tx.22916	chr13	+	2108	4	NIC	ENSMUSG00000021361.8	novel	914	6	NA	NA	50	-4	intron_retention	FALSE	canonical	3	639	junction_2	42.1215173304835	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	41169817	41176058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_41171259_41171831_41171934_41174594_41174683_41175581
tx.22917	chr13	-	2726	4	ISM	ENSMUSG00000021362.8	ENSMUST00000021791.8	3073	5	4313	-3	-187	2	3prime_fragment	FALSE	canonical	3	9	junction_3	1.69967317119759	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATCTCTTCAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	41259346	41254900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_41257166_41258044_41258171_41258886_41259000_41259124
tx.22918	chr13	+	8896	9	FSM	ENSMUSG00000021366.9	ENSMUST00000060148.6	8753	9	-142	-1	-142	1	multi-exon	FALSE	canonical	1	3	junction_2	8.24526379202024	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGTGCTTACGTCTCG	NA	False	NA	NA	False	NA	NA	NA	42205354	42338503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_42205567_42208875_42209019_42276635_42276690_42307855_42313795_42316826_42316961_42317692_42317869_42321037_42321140_42334907_42335408_42336867
tx.22919	chr13	+	2318	5	FSM	ENSMUSG00000021367.9	ENSMUST00000021796.9	2139	5	-180	1	-180	-1	multi-exon	FALSE	canonical	1	1	junction_4	2.44948974278318	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTTGTGAATTATTTC	NA	False	NA	NA	False	NA	NA	NA	42454771	42461465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_42455435_42457032_42457202_42458421_42458581_42458730_42458845_42460252
tx.2292	chr10	+	3572	5	NNC	ENSMUSG00000112742.2	novel	415	3	NA	NA	-17	4727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.4693443182191	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAAAGATAACCCACTG	NA	False	NA	NA	False	NA	NA	NA	130378198	130412389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_130378320_130407161_130407289_130407478_130407540_130408627_130409350_130409848
tx.22920	chr13	+	4868	2	Antisense	novelGene_ENSMUSG00000021368.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	43316607	43321514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr13_+_43317202_43317240
tx.22921	chr13	+	2408	8	ISM	ENSMUSG00000054021.7	ENSMUST00000220576.2	1579	9	21	586	-1	-583	intron_retention	FALSE	canonical	3	180	junction_1	20.0244748204974	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	43519160	43540549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973
tx.22922	chr13	-	4111	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	84.6596125670322	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTGTACAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	43713632	43691870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_43694985_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
tx.22923	chr13	-	4191	8	ISM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	39	2	-27	-2	intron_retention	FALSE	canonical	3	106	junction_1	10.9935045757549	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCTGAGCTTGGTAAT	NA	False	NA	NA	False	NA	NA	NA	47196647	47177020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874
tx.22924	chr13	-	808	5	NNC	ENSMUSG00000037960.12	novel	804	6	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	161.537147430552	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	49369471	49356426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_49356712_49357193_49357361_49358667_49358822_49361479_49361623_49369412
tx.22925	chr13	+	3269	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	40.3220918821184	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5515	False	NA	NA	False	NA	NA	NA	51805753	51838080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819345_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
tx.22926	chr13	-	1843	5	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	5	junction_1	1.58113883008419	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGCTTTGGGTCATGAT	8286	False	NA	NA	False	NA	NA	NA	52727316	52708392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_-_52709757_52709963_52710015_52714215_52714317_52715084_52715256_52727160
tx.22927	chr13	+	5478	14	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-101	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	26.5171597897212	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTCTTGTGATGACCT	NA	False	NA	NA	False	NA	NA	NA	52737107	52802814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_52737642_52750993_52751091_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
tx.22928	chr13	+	5200	15	NIC	ENSMUSG00000021457.15	novel	5122	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	29.2302610878744	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTGATGACCTTTAC	NA	False	NA	NA	False	NA	NA	NA	52737458	52802818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_52737642_52750993_52751091_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
tx.22929	chr13	+	3568	5	ISM	ENSMUSG00000021457.15	ENSMUST00000055087.7	5122	14	41327	4	41221	-4	3prime_fragment	FALSE	canonical	3	54	junction_4	15.1904575309633	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTCTTGTGATGACCT	NA	False	NA	NA	False	NA	NA	NA	52792215	52802814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
tx.2293	chr10	+	3525	5	NNC	ENSMUSG00000112742.2	novel	415	3	NA	NA	-21	4676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.4693443182191	12	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	130378194	130412338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_130378320_130407161_130407289_130407478_130407540_130408627_130409350_130409848
tx.22930	chr13	-	5306	8	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	114	junction_4	4.59369576880387	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTATTATCTCTG	NA	False	NA	NA	False	NA	NA	NA	53440173	53263354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_53265705_53267083_53267287_53271170_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
tx.22931	chr13	+	5013	11	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-39	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.6320184237353	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCTTAGACTCCAGGG	NA	False	NA	NA	False	NA	NA	NA	54651552	54699098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_54651818_54660125_54660286_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
tx.22934	chr13	+	3423	6	FSM	ENSMUSG00000021481.12	ENSMUST00000162476.8	1112	6	-10	-2301	-4	231	multi-exon	FALSE	canonical	2	4	junction_3	25.663982543635	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAAAAATAGTCTGTCT	15	False	NA	NA	False	NA	NA	NA	55253135	55282869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55270142_55270329_55278346_55278441_55280119
tx.22935	chr13	+	9975	3	FSM	ENSMUSG00000021481.12	ENSMUST00000160310.2	644	3	-6858	-2473	2067	4	multi-exon	FALSE	canonical	3	60	junction_1	7.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGATGTGTGCGCTCTTC	9850	False	NA	NA	False	NA	NA	NA	55262970	55282642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55270329_55278346_55278441_55280119
tx.22936	chr13	+	3056	17	ISM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	2775	3	-268	-3	3prime_fragment	FALSE	canonical	2	5	junction_3	3.50836055017155	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCCCTGTGTGGCAGGG	NA	False	NA	NA	False	NA	NA	NA	55303227	55316569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
tx.22937	chr13	+	2125	12	ISM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	7405	19	3928	-19	3prime_fragment	FALSE	canonical	2	7	junction_1	3.66353485083816	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTGTGCCTGGTGGCT	NA	False	NA	NA	False	NA	NA	NA	55307857	55316553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
tx.22938	chr13	+	7846	24	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-408	-1739	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	51.0281067144199	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATTCGATTCCACT	NA	False	NA	NA	False	NA	NA	NA	55358139	55461829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
tx.22939	chr13	+	3441	4	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-17	1	intron_retention	FALSE	canonical	3	116	junction_1	68.9025076144225	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTCTTTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	55359614	55388661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_55359814_55361016_55361964_55381707_55381844_55386502
tx.2294	chr11	+	648	4	NNC	ENSMUSG00000082286.12	novel	659	4	NA	NA	-1916	28567	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	5.31245915016974	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGTGGGACATTTTC	NA	False	NA	NA	False	NA	NA	NA	3073987	3109571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_3074125_3075787_3076059_3077478_3077645_3109497
tx.22940	chr13	+	8147	13	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	67775	1	-13411	-1	3prime_fragment	FALSE	canonical	3	160	junction_12	29.6548431495131	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	2939	False	NA	NA	False	NA	NA	NA	55425369	55466137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
tx.22941	chr13	-	4202	7	NNC	ENSMUSG00000056222.16	novel	4614	12	NA	NA	382807	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.89296944860009	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGAATGCTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	57672594	57573906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_57577299_57578101_57578240_57583922_57583986_57588133_57588356_57592119_57592237_57660504_57660620_57672439
tx.22942	chr13	+	3912	3	FSM	ENSMUSG00000050002.15	ENSMUST00000226010.2	1898	3	5	-2019	0	3	multi-exon	FALSE	canonical	3	188	junction_1	4.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	NA	False	NA	NA	NA	58305467	58311763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_58305551_58307690_58307722_58307965
tx.22943	chr13	+	4676	3	NIC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-7	0	intron_retention	FALSE	canonical	1	2	junction_1	187	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	NA	False	NA	NA	NA	58550069	58557910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_58552470_58554815_58554905_58555723
tx.22944	chr13	-	2040	9	NNC	ENSMUSG00000021557.16	novel	4143	25	NA	NA	3368	2	intron_retention	FALSE	canonical	2	7	junction_8	8.08451451851006	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTTGTCATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	59625784	59597348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59625604
tx.22945	chr13	-	2813	8	ISM	ENSMUSG00000021557.16	ENSMUST00000169745.8	4143	25	78825	-339	3241	-4	3prime_fragment	FALSE	canonical	3	18	junction_3	5.31075151298317	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATTTCTCTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	59625911	59597354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807
tx.22946	chr13	+	173	2	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAAAAGAGTT	5161	False	NA	NA	False	NA	NA	NA	59828468	59828704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_59828548_59828610
tx.22947	chr13	-	5957	28	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	32.582069008129	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATCCACATTATTTT	NA	False	NA	NA	False	NA	NA	NA	59970918	59919691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
tx.22948	chr13	-	5673	29	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	37.0824371213266	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	NA	False	NA	NA	NA	59970913	59919692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_59920674_59926565_59926630_59926950_59927016_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
tx.22949	chr13	+	5231	27	NNC	ENSMUSG00000021559.15	novel	5009	27	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	13.5179586883742	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTCTAGTCCTTG	9809	False	NA	NA	False	NA	NA	NA	60749748	60910999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909505_60910170
tx.2295	chr11	-	4571	30	NIC	ENSMUSG00000023764.19	novel	3969	33	NA	NA	1	2	intron_retention	TRUE	canonical	0	0	junction_13	29.5977792656039	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCTACTTTTCATACAA	7980	False	NA	NA	False	NA	NA	NA	3143462	3081883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3093694_3093791_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
tx.22950	chr13	-	2109	4	NNC	ENSMUSG00000072066.8	novel	1457	4	NA	NA	43	-604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.12825877028341	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTGTGTGTGGACCAG	NA	False	NA	NA	False	NA	NA	NA	62771951	62751430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_62753195_62755186_62755314_62770760_62770879_62771851
tx.22951	chr13	+	1989	5	ISM	ENSMUSG00000021458.18	ENSMUST00000220885.2	894	6	300	-826	-15	-2	3prime_fragment	FALSE	canonical	3	17	junction_1	48.7769156466458	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAAGCACTCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	63420614	63450683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
tx.22952	chr13	-	2238	11	FSM	ENSMUSG00000033114.12	ENSMUST00000222794.2	983	11	1	-1256	1	0	multi-exon	FALSE	canonical	2	7	junction_10	34.3745545425683	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTATGGTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	64277138	64244121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64276999
tx.22953	chr13	-	2117	10	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	36.5817197821839	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTATGGTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	64277139	64244122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64270132_64270167_64276999
tx.22954	chr13	-	5533	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	136	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	17.1357268913424	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	NA	NA	NA	64396320	64340358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
tx.22955	chr13	-	5601	11	NIC	ENSMUSG00000033102.16	novel	5859	14	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	26.2785083290509	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9674	False	NA	NA	False	NA	NA	NA	64422804	64340358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64422404
tx.22956	chr13	-	2953	5	FSM	ENSMUSG00000021482.11	ENSMUST00000021938.11	791	5	-156	-2006	-20	-3	multi-exon	FALSE	canonical	2	5	junction_3	76.095334942426	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAAATTTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	64460544	64437634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64460080_64460150_64460306
tx.22957	chr13	-	6350	24	FSM	ENSMUSG00000033063.9	ENSMUST00000091554.6	6344	24	-45	39	-45	-39	multi-exon	FALSE	canonical	0	0	junction_1	1.47056821959024	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTGCTGTTGTAATAA	1005	False	NA	NA	False	NA	NA	NA	65051814	64884034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_64886483_64888359_64888432_64888627_64888850_64893522_64893611_64894550_64894685_64896246_64896472_64899490_64899731_64905018_64905238_64906062_64906234_64909732_64909861_64911938_64912096_64919769_64919971_64920482_64920603_64926603_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411_65006606_65035506_65035618_65051560
tx.22958	chr13	-	3903	8	ISM	ENSMUSG00000032999.11	ENSMUST00000037372.8	3527	10	9381	5	-6070	0	3prime_fragment	FALSE	canonical	3	50	junction_3	6.71580529916752	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGACTTCTAATC	4477	False	NA	NA	False	NA	NA	NA	65344149	65324929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799
tx.22959	chr13	+	3743	4	FSM	ENSMUSG00000110393.3	ENSMUST00000209951.2	1597	4	-277	-1869	-277	1836	multi-exon	FALSE	canonical	3	28	junction_1	3.55902608401044	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATCCCAGCGTATCCT	NA	False	NA	NA	False	NA	NA	NA	65389289	65399804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789
tx.2296	chr11	-	3868	32	FSM	ENSMUSG00000023764.19	ENSMUST00000066391.14	3898	32	24	6	0	0	multi-exon	FALSE	canonical	2	8	junction_15	27.928964448237	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	8003	False	NA	NA	False	NA	NA	NA	3143439	3081886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
tx.22960	chr13	+	1433	7	NIC	ENSMUSG00000021514.19	novel	1580	8	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_6	15.1840559652405	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTGCTGTGATAGCT	NA	False	NA	NA	False	NA	NA	NA	65426646	65452034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65451631
tx.22961	chr13	+	4734	3	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	22	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACAGTCATCTCCAAAT	NA	False	NA	NA	False	NA	NA	NA	66606334	66612677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_66610037_66610237_66610441_66611848
tx.22962	chr13	-	4081	8	NNC	ENSMUSG00000100235.9	novel	3886	7	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.94871659305393	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATCGTCAGTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	67256598	67217468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_67219593_67222149_67222246_67222896_67223024_67245856_67247112_67250106_67250200_67250761_67250888_67254202_67254377_67256512
tx.22963	chr13	-	3900	4	FSM	ENSMUSG00000057842.15	ENSMUST00000168892.9	4040	4	-23	163	-23	-163	multi-exon	FALSE	canonical	2	3	junction_1	2.05480466765633	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCATGGTTTGATGTC	3590	False	NA	NA	False	NA	NA	NA	67480657	67462491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67466042_67468335_67468432_67468891_67469019_67480530
tx.22964	chr13	-	4103	5	FSM	ENSMUSG00000071281.13	ENSMUST00000127979.9	733	5	-72	-3298	-18	3	multi-exon	FALSE	canonical	0	0	junction_3	18.0329559418305	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATTTTATTTATGAG	NA	False	NA	NA	False	NA	NA	NA	67872463	67853424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67869565_67869665_67872306
tx.22965	chr13	+	2420	16	FSM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	-1	11	-1	-6	multi-exon	TRUE	canonical	3	18	junction_6	38.2023850331654	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTAACTCTGATCACCCCG	NA	False	NA	NA	False	NA	NA	NA	74085928	74109002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
tx.22966	chr13	-	1191	4	NNC	ENSMUSG00000112964.2	novel	1332	4	NA	NA	3	-376	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	11.0252236056942	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATCTGATTCATCTTT	6472	False	NA	NA	False	NA	NA	NA	74610835	74584041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_74584910_74585699_74585761_74585978_74586106_74610700
tx.22967	chr13	-	5833	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18629	4997	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	30.3275452353137	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTTGGGTGAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	74739524	74722479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730495_74731765_74731993_74739390
tx.22968	chr13	-	4851	31	FSM	ENSMUSG00000021585.11	ENSMUST00000065629.6	2910	31	-23	-1918	-23	-2	multi-exon	FALSE	canonical	3	15	junction_30	32.8517883835873	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTCTTGGCTATGTGT	NA	False	NA	NA	False	NA	NA	NA	74956081	74840488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74955937
tx.22969	chr13	-	1110	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	79	247	-29	0	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	76166710	76150885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
tx.2297	chr11	-	870	5	FSM	ENSMUSG00000023764.19	ENSMUST00000118627.2	831	5	-35	-4	1	4	multi-exon	FALSE	canonical	3	18	junction_1	37.5724300518346	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGCACTTTGTTATTT	7983	False	NA	NA	False	NA	NA	NA	3143459	3135563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3135975_3136064_3136137_3137239_3137411_3138940_3139057_3143359
tx.22970	chr13	+	395	2	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTTAACCACCCTACT	NA	False	NA	NA	False	NA	NA	NA	80849185	80853534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_80849433_80853386
tx.22971	chr13	+	3336	7	ISM	ENSMUSG00000035762.12	ENSMUST00000225069.2	2414	11	59153	-100	30208	96	3prime_fragment	FALSE	canonical	0	0	junction_5	74.2173983795055	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTGCCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	84429597	84444085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
tx.22972	chr13	+	1463	2	FSM	ENSMUSG00000049517.9	ENSMUST00000224430.2	450	2	-1013	0	-45	0	multi-exon	FALSE	canonical	3	19809	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATTTTGTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	91071290	91072843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_91072566_91072655
tx.22973	chr13	+	2914	12	NNC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.5229600086531	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGGGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95112878	95159821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_95113098_95114977_95115094_95133636_95133694_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
tx.22974	chr13	-	5177	28	ISM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	-3	29401	-3	2000	5prime_fragment	FALSE	canonical	3	39	junction_18	8.56925310429282	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTACTCAGCACTAAAGG	NA	False	NA	NA	False	NA	NA	NA	96028506	95793082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
tx.22975	chr13	+	5356	25	NNC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	-24	-242	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	3.8888640872225	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTATTGTCATAA	NA	False	NA	NA	False	NA	NA	NA	96884755	97046305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045988
tx.22977	chr13	+	4736	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	1	0	1	0	multi-exon	FALSE	canonical	3	5	junction_1	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTATTGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	97377613	97389542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_97378038_97381478_97383293_97387044
tx.22978	chr13	+	2702	2	ISM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	5481	-5	5481	5	3prime_fragment	FALSE	canonical	3	9	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTATTGTGAGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	97383093	97389547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_97383293_97387044
tx.22979	chr13	-	9914	39	NIC	ENSMUSG00000049658.14	novel	9921	39	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_35	12.9703742975399	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTGTCCTTTTCAA	6762	False	NA	NA	False	NA	NA	NA	100240575	100154502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_100156919_100160107_100160364_100161904_100162164_100163942_100163980_100167292_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230051_100234045_100234106_100234993_100235104_100235460_100235738_100240134
tx.2298	chr11	+	3592	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	20	2	-6	0	multi-exon	TRUE	canonical	3	81	junction_10	64.4808326386825	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3864	False	NA	NA	False	NA	NA	NA	3152682	3194586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
tx.22980	chr13	-	1710	10	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	13	-153	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	235.310564421564	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGCATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	100867424	100839291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100866965_100867026_100867281
tx.22981	chr13	-	6379	3	ISM	ENSMUSG00000021709.15	ENSMUST00000053927.12	6103	25	61687	4	61687	-4	intron_retention	FALSE	canonical	3	89	junction_2	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCGAGTCTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	103964113	103955302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_103957315_103959318_103959394_103959821
tx.22982	chr13	-	3844	5	ISM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	21497	25	-2806	-25	3prime_fragment	FALSE	canonical	3	590	junction_4	110.626341799772	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTTTTGCATAT	NA	False	NA	NA	False	NA	NA	NA	104931964	104767672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006
tx.22983	chr13	-	2605	8	FSM	ENSMUSG00000021720.12	ENSMUST00000226044.2	3279	8	108	566	108	9	multi-exon	FALSE	canonical	0	0	junction_3	1.8070158058105	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGACTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	105430802	105267074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_105268072_105304035_105304162_105317957_105318184_105383170_105383207_105386118_105387076_105388759_105388856_105407412_105407548_105430770
tx.22984	chr13	+	2035	3	FSM	ENSMUSG00000071180.6	ENSMUST00000226042.2	1092	3	-10	-933	-10	0	multi-exon	FALSE	canonical	3	16	junction_1	87.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	108181009	108185706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_108181168_108182958_108183103_108183973
tx.22985	chr13	+	1551	12	NNC	ENSMUSG00000021694.19	novel	2111	12	NA	NA	4	-460	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.729681866001	2	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTCTCCTTGAGCGCA	NA	False	NA	NA	False	NA	NA	NA	108295275	108331051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315239_108320354_108320457_108323730_108323815_108330589
tx.22986	chr13	+	5045	7	NIC	ENSMUSG00000021696.10	novel	4013	8	NA	NA	1	-609	intron_retention	FALSE	canonical	3	95	junction_1	6.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTGTTGGATTCAATGA	NA	False	NA	NA	False	NA	NA	NA	108350938	108419998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_108351035_108393200_108393333_108403723_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
tx.22987	chr13	+	5298	14	ISM	ENSMUSG00000021699.18	ENSMUST00000074103.12	2167	15	54230	-3195	-16835	1208	3prime_fragment	FALSE	canonical	3	20	junction_2	4.79644839019074	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGTGAGAGAATGAATG	NA	False	NA	NA	False	NA	NA	NA	109876919	110091203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
tx.22988	chr13	+	5240	13	NIC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-14	34	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.9757852743231	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCAGTCTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	111822767	111855164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_111822872_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
tx.22989	chr13	+	2874	3	NNC	ENSMUSG00000047789.6	novel	2063	3	NA	NA	-3	790	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	22.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGGTCTAGAAGTCT	NA	False	NA	NA	False	NA	NA	NA	112797296	112811009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_112797407_112806120_112806266_112808390
tx.2299	chr11	+	3518	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	53.324624433129	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3866	False	NA	NA	False	NA	NA	NA	3152684	3194586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
tx.22990	chr13	-	1028	3	FSM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	16	-2	-1	2	multi-exon	FALSE	canonical	3	23	junction_2	4	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGCATTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	113182928	113179290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_113179834_113181965_113182228_113182705
tx.22991	chr13	-	2822	6	FSM	ENSMUSG00000021765.10	ENSMUST00000223640.3	2833	6	11	0	9	0	multi-exon	FALSE	canonical	1	3	junction_1	6.97423830966508	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	114595476	114588825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_114590342_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
tx.22992	chr13	+	4217	2	FSM	ENSMUSG00000074634.13	ENSMUST00000178948.2	1648	2	-2568	-1	-2568	1	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGTTTCTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	120065617	120071995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_120068567_120070727
tx.22993	chr13	-	2429	4	FSM	ENSMUSG00000095930.2	ENSMUST00000178142.2	4103	4	-137	1811	-137	-1811	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGTGTGTCTTGCC	NA	False	NA	NA	False	NA	NA	NA	120217555	120173440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_120174332_120175643_120175913_120189115_120190060_120217230
tx.22994	chr14	-	2262	11	NIC	ENSMUSG00000021785.9	novel	2935	12	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	20.8892316756744	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTTCAGTGCTTAC	NA	False	NA	NA	False	NA	NA	NA	6220438	6158227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6215006_6215122_6220265
tx.22995	chr14	-	1298	11	NIC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	9.8974744253269	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	NA	False	NA	NA	NA	8123348	8114269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8123250
tx.22996	chr14	+	1174	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-87	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	287.160125191504	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	8508398	8520749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_8508579_8512131_8512284_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.22997	chr14	-	2286	5	FSM	ENSMUSG00000033111.17	ENSMUST00000223762.2	2292	5	2	4	-2	-4	multi-exon	FALSE	canonical	3	15	junction_4	58.5683361552981	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACCTCTCAGAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	10185539	10166643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185505
tx.22998	chr14	-	2346	5	FSM	ENSMUSG00000033111.17	ENSMUST00000224389.2	2444	5	-5	103	1	5	multi-exon	FALSE	canonical	3	13	junction_4	59.4011784394889	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAAAGCTTTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	10185514	10166634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185429
tx.22999	chr14	-	941	7	NIC	ENSMUSG00000033111.17	novel	809	6	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	61.1375952712859	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCCTCTTGAGTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	10185563	10167780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_10168192_10168274_10168365_10168516_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
tx.23	chr1	+	1652	12	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	10	-163	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	26.0923344558392	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	NA	NA	NA	9618289	9646963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
tx.230	chr1	+	3435	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	22	1	22	-1	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGCAGGCCTGTCATT	NA	False	NA	NA	False	NA	NA	NA	43137891	43155106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
tx.2300	chr11	+	3780	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	67.055647611094	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3871	False	NA	NA	False	NA	NA	NA	3152689	3194586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
tx.23000	chr14	-	5302	9	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	9.7971615787431	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATAGTATTGGGCATTT	NA	False	NA	NA	False	NA	NA	NA	10254554	10227722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439
tx.23001	chr14	-	8039	26	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_21	11.9401172523556	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGATAGTATTGGGCATT	NA	False	NA	NA	False	NA	NA	NA	10507190	10227723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040
tx.23002	chr14	+	2716	4	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-47	-147680	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	75.7011668778406	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTTAAGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	13803485	13819672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13817450
tx.23003	chr14	+	3008	4	NIC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	15287	1	intron_retention	FALSE	canonical	0	0	junction_1	2.82842712474619	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATGCTTCTGCGT	NA	False	NA	NA	False	NA	NA	NA	14916493	14924623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_14918042_14918991_14919124_14919799_14919983_14923478
tx.23004	chr14	-	1960	7	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-5	1057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3284303119776	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	NA	NA	NA	17614202	17592864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17609286_17609438_17612629_17612744_17614118
tx.23005	chr14	-	2025	7	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-52	1054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3284303119776	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCAGTGTATGCTTCA	NA	False	NA	NA	False	NA	NA	NA	17614249	17592867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17614118
tx.23006	chr14	-	4493	4	FSM	ENSMUSG00000079386.9	ENSMUST00000112776.4	519	4	-2917	-1057	-2917	1057	multi-exon	FALSE	canonical	0	0	junction_2	16.0277537068951	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCT	NA	False	NA	NA	False	NA	NA	NA	17957932	17949263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_17950397_17952946_17953130_17953805_17953938_17954887
tx.23007	chr14	-	2302	8	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	-9	181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.32992949004287	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTATTTGATATTTT	NA	False	NA	NA	False	NA	NA	NA	18359256	18336807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344610_18354336_18354488_18357666_18357781_18359162
tx.23008	chr14	-	4861	6	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	11383	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.33238075793812	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATGCTTCTGCGT	NA	False	NA	NA	False	NA	NA	NA	18347864	18336987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344610_18344766
tx.23009	chr14	-	1979	8	Fusion	ENSMUSG00000096488.2_ENSMUSG00000095195.8	novel	1955	7	NA	NA	6	-6	multi-exon	TRUE	non_canonical	0	0	junction_3	1.74963553055941	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	NA	NA	NA	19057153	18875558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_-_18876696_18880194_18880378_18881053_18881186_18882135_18882299_18892819_18892971_18896174_18896289_18897665_18897721_19057109
tx.2301	chr11	+	3705	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	56.8118974819688	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3874	False	NA	NA	False	NA	NA	NA	3152692	3194586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
tx.23010	chr14	-	2068	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	NA	NA	NA	19137139	19114979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122562_19132241_19132393_19135569_19135684_19137061
tx.23011	chr14	-	2238	7	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-270	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.46249406456535	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	NA	False	NA	NA	False	NA	NA	NA	19137416	19114976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19132241_19132393_19135569_19135684_19137061
tx.23012	chr14	+	2494	9	FSM	ENSMUSG00000021809.11	ENSMUST00000022343.6	2494	9	-1	1	-1	-1	multi-exon	FALSE	canonical	2	6	junction_1	3.70809924354783	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGACTCTTTTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	20344788	20367645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
tx.23013	chr14	+	4245	17	ISM	ENSMUSG00000021819.12	ENSMUST00000022358.9	6073	26	6541	2	-1182	-1	3prime_fragment	FALSE	canonical	3	24	junction_1	11.5174799218405	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	20764160	20773685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
tx.23014	chr14	-	3649	15	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	16.2331545339299	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	NA	False	NA	NA	NA	20784409	20773797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_20774429_20774528_20774632_20774815_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
tx.23015	chr14	-	3744	20	NIC	ENSMUSG00000021820.19	novel	3703	21	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	10.4229131778775	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	NA	False	NA	NA	NA	20844185	20784942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
tx.23016	chr14	-	2734	2	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTGTCTAACTGTCTT	NA	False	NA	NA	False	NA	NA	NA	21528363	21524498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_21527123_21528253
tx.23017	chr14	-	4498	4	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-21	1861	intron_retention	FALSE	canonical	3	276	junction_3	6.94422221866655	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGATTTGAGAGGGAGC	NA	False	NA	NA	False	NA	NA	NA	21898983	21894061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_21898189_21898277_21898384_21898608_21898737_21898846
tx.23018	chr14	-	1257	5	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	276	junction_4	6.05702071979286	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGAGCATCCTCTTC	NA	False	NA	NA	False	NA	NA	NA	21899053	21897247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
tx.23019	chr14	-	5562	26	ISM	ENSMUSG00000063142.16	ENSMUST00000223749.2	3342	27	200627	-2401	1	2401	3prime_fragment	FALSE	canonical	0	0	junction_9	1.41421356237309	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTTATTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	23853371	23356681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
tx.2302	chr11	-	1403	8	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	1507	14	1506	-14	3prime_fragment	FALSE	canonical	3	1733	junction_5	103.695787409762	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTATTCATG	NA	False	NA	NA	False	NA	NA	NA	3214886	3199920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766
tx.23020	chr14	-	7471	31	NIC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	238	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_28	29.5535107897522	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	NA	False	NA	NA	NA	24295750	24184020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24242859_24243023_24252365_24252435_24295214
tx.23021	chr14	+	5954	14	ISM	ENSMUSG00000007817.16	ENSMUST00000162645.8	7482	24	187493	4	-10113	-4	3prime_fragment	FALSE	canonical	3	49	junction_1	9.62061396261961	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTTCTGGTGAGTTAG	2406	False	NA	NA	False	NA	NA	NA	25647140	25667163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
tx.23022	chr14	-	7106	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-64	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	97.5312198374203	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTATGAAATATTTAG	NA	False	NA	NA	False	NA	NA	NA	26692526	26640942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26672913_26673039_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
tx.23023	chr14	-	4342	11	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-25	-6644	intron_retention	FALSE	canonical	3	74	junction_8	15.0283066245003	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCCTATGACTCTATG	7501	False	NA	NA	False	NA	NA	NA	27230442	27211012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
tx.23024	chr14	+	2618	4	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-84	1399	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	19.3448241713959	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGACATTCTTGTTTGTT	2242	False	NA	NA	False	NA	NA	NA	27344300	27377158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_27344572_27350368_27350423_27374643_27375441_27375662
tx.23025	chr14	+	4849	22	NIC	ENSMUSG00000006527.17	novel	3299	21	NA	NA	-314	1144	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	25.9699809260048	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGAATTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	30438133	30541447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_30438546_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
tx.23026	chr14	-	1435	2	FSM	ENSMUSG00000021917.17	ENSMUST00000226290.2	1241	2	-193	-1	47	0	multi-exon	FALSE	canonical	3	1787	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATTTGTTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	30723519	30721783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30722861_30723161
tx.23027	chr14	+	7666	29	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	44.6827821471332	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	8217	False	NA	NA	False	NA	NA	NA	30741096	30843546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
tx.23028	chr14	+	7736	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_27	41.5514808978429	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8229	False	NA	NA	False	NA	NA	NA	30741108	30843548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
tx.23029	chr14	+	5567	14	ISM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	48288	1	-16778	-1	3prime_fragment	FALSE	canonical	3	94	junction_10	35.9532898808223	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	NA	False	NA	NA	False	NA	NA	NA	30789382	30843548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
tx.2303	chr11	-	1536	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-4	14	-4	-14	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	1727	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTATTCATG	NA	False	NA	NA	False	NA	NA	NA	3216397	3199920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
tx.23030	chr14	-	459	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	-7	-26	3	26	multi-exon	FALSE	canonical	3	53	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGTTTCTTAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	30850867	30846609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30846791_30850589
tx.23031	chr14	-	3542	20	ISM	ENSMUSG00000019027.9	ENSMUST00000048603.8	12872	78	54328	11	-57	-11	3prime_fragment	FALSE	canonical	0	0	junction_4	1.18391809254758	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTGTTGTACCGTGGC	9824	False	NA	NA	False	NA	NA	NA	30991525	30982342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_30982505_30983002_30983238_30983445_30983798_30984109_30984241_30984369_30984541_30985075_30985253_30985324_30985505_30985806_30985978_30986271_30986404_30986479_30986639_30986867_30987013_30987219_30987417_30987835_30987988_30988271_30988468_30988596_30988823_30989411_30989573_30989668_30989819_30989942_30990063_30990741_30990868_30991326
tx.23032	chr14	-	4324	8	ISM	ENSMUSG00000014496.9	ENSMUST00000227863.2	6616	28	69433	0	-3257	0	3prime_fragment	FALSE	canonical	3	165	junction_6	11.0693546444632	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	3281	False	NA	NA	False	NA	NA	NA	31432917	31420724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708
tx.23033	chr14	+	2347	2	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGACATAGATGTTTG	NA	False	NA	NA	False	NA	NA	NA	31665388	31668352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_31665949_31666565
tx.23034	chr14	+	5772	21	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	-13	1387	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	30.4043993527253	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	32235464	32300448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_32235557_32238899_32239336_32240899_32241021_32242904_32242950_32248207_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
tx.23035	chr14	+	5945	21	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	-10	1394	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	29.9439476355406	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTTTCCTGTATTGTC	NA	False	NA	NA	False	NA	NA	NA	32235467	32300455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_32235557_32238899_32239336_32240899_32241021_32242904_32243017_32248105_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
tx.23036	chr14	-	1940	2	ISM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	-15	8	-15	-8	intron_retention	FALSE	canonical	3	2585	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGTCCTGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	34077405	34073845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_34074035_34075654
tx.23037	chr14	-	1702	2	Antisense	novelGene_ENSMUSG00000041445.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATGTTTTACTCTAGAG	5253	False	NA	NA	False	NA	NA	NA	34112517	34105519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_-_34105811_34111106
tx.23038	chr14	-	5723	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	3	-327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	42.5868393859992	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGTTTTGTGATGCT	NA	False	NA	NA	False	NA	NA	NA	34224641	34133017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182361_34182573_34224351
tx.23039	chr14	-	5712	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	6	-332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	38.8682782684743	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	34224638	34133022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182361_34182570_34224351
tx.2304	chr11	+	2699	3	FSM	ENSMUSG00000020453.18	ENSMUST00000094471.10	2930	3	229	2	-217	-2	multi-exon	TRUE	canonical	3	69	junction_2	176	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGGCTTTGTGTGTT	6235	False	NA	NA	False	NA	NA	NA	3240221	3245427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3241885_3243279_3243344_3244455
tx.23040	chr14	+	1151	4	ISM	ENSMUSG00000041078.8	ENSMUST00000043349.7	5720	16	-304	556428	-304	-456839	5prime_fragment	FALSE	canonical	0	0	junction_2	1.88561808316413	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCATGGGATCTGAGGC	NA	False	NA	NA	False	NA	NA	NA	34541760	34748908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_34542264_34544509_34544666_34667709_34667995_34748701
tx.23041	chr14	-	7115	10	ISM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	27671	0	-1161	0	3prime_fragment	FALSE	canonical	3	13	junction_1	24.4409088352164	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	36663063	36596892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768
tx.23042	chr14	-	7478	11	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.743868911474	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCTCCACAGCTT	NA	False	NA	NA	False	NA	NA	NA	36690718	36596894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36643537_36643610_36648795_36648887_36660540_36660738_36661768_36663222_36690498
tx.23043	chr14	+	1976	5	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14066	-336	at_least_one_novel_splicesite	TRUE	canonical	3	3	junction_3	8.44097150806707	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACC	NA	False	NA	NA	False	NA	NA	NA	40986695	41010436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_40987404_41001646_41001810_41002809_41002942_41003619_41003802_41009645
tx.23044	chr14	+	6633	4	NIC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-4475	-331	intron_retention	FALSE	canonical	3	3	junction_2	9.2736184954957	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTAAGAAACCTCTTT	NA	False	NA	NA	False	NA	NA	NA	40996286	41010441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_41001810_41002809_41002942_41003619_41003802_41009645
tx.23045	chr14	+	3950	2	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	162	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGCCTGTATAAAATTA	NA	False	NA	NA	False	NA	NA	NA	43169939	43174283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_43170061_43170454
tx.23046	chr14	+	1883	8	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45951	-22	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	10.4315064363021	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTAAGAAACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	43735081	43788648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_43735407_43778540_43778627_43779598_43779685_43781120_43781231_43781959_43782123_43783111_43783244_43783926_43784109_43787849
tx.23048	chr14	-	4996	21	NNC	ENSMUSG00000021830.15	novel	5045	21	NA	NA	3	22	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	8.56679636737094	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	45456879	45370899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_45373431_45377874_45378066_45379429_45379523_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
tx.23049	chr14	-	3477	21	NIC	ENSMUSG00000021830.15	novel	5045	21	NA	NA	4	8	combination_of_known_junctions	FALSE	canonical	3	7	junction_20	7.88669766125214	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTTGCATTGTACAT	NA	False	NA	NA	False	NA	NA	NA	45456878	45372355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456803
tx.2305	chr11	+	3301	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-183	0	-183	0	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	538	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6269	False	NA	NA	False	NA	NA	NA	3240255	3259083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
tx.23050	chr14	-	3480	21	NIC	ENSMUSG00000021830.15	novel	4028	21	NA	NA	-2	8	combination_of_known_junctions	FALSE	canonical	3	7	junction_20	9.22212014669078	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTTGCATTGTACAT	NA	False	NA	NA	False	NA	NA	NA	45456884	45372355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456803
tx.23051	chr14	-	2624	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	472.912930675405	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCCATCAGGTAAC	NA	False	NA	NA	False	NA	NA	NA	45626438	45613790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626388
tx.23052	chr14	-	5113	13	NIC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	-1	-2	intron_retention	TRUE	canonical	3	14	junction_1	39.0799572102575	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATGCTGAGTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	45895601	45830632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
tx.23053	chr14	-	4936	12	NIC	ENSMUSG00000037697.20	novel	9802	13	NA	NA	-22	-8	intron_retention	FALSE	canonical	2	3	junction_11	32.6810279332958	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTCCATGCTGAGT	NA	False	NA	NA	False	NA	NA	NA	45895622	45830638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45894678
tx.23054	chr14	+	505	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	-12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGAAGGTGGACTCCAG	NA	False	NA	NA	False	NA	NA	NA	46321484	46322445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_46321631_46322086
tx.23055	chr14	-	4688	6	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_3	231.362572599805	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	47059687	47045605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053685_47054842_47054940_47059557
tx.23056	chr14	+	4061	2	ISM	ENSMUSG00000021840.18	ENSMUST00000164235.3	4531	3	2181	115	-217	-6	3prime_fragment	FALSE	canonical	3	245	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCATGGTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	47548187	47560546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_47548571_47556868
tx.23057	chr14	+	1741	5	FSM	ENSMUSG00000021846.10	ENSMUST00000226828.2	3527	5	-81	1867	-35	0	multi-exon	FALSE	canonical	0	0	junction_1	29.5972971738975	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATCTCAACTGCCATGC	NA	False	NA	NA	False	NA	NA	NA	48358244	48494281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_48358691_48477666_48477769_48487966_48488162_48490033_48490223_48493472
tx.23058	chr14	+	1549	10	ISM	ENSMUSG00000036339.19	ENSMUST00000133744.8	2996	12	13	14358	13	4358	5prime_fragment	TRUE	canonical	3	30	junction_9	4.84067131350933	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGGGGTTCTTGTA	NA	False	NA	NA	False	NA	NA	NA	48683821	48724611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197
tx.23059	chr14	-	1864	3	ISM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	1404	2	1404	-2	3prime_fragment	FALSE	canonical	3	174	junction_1	20	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	7585	False	NA	NA	False	NA	NA	NA	51031781	51026706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_51027470_51029429_51029764_51031014
tx.2306	chr11	+	3363	5	FSM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	-190	0	-172	0	multi-exon	FALSE	canonical	0	0	junction_4	189.564467925822	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6280	False	NA	NA	False	NA	NA	NA	3240266	3259083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
tx.23060	chr14	-	3969	2	NNC	ENSMUSG00000071470.5	novel	444	3	NA	NA	5090	-4309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTATGAGTTGTTCTT	1962	False	NA	NA	False	NA	NA	NA	51040099	51035570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_51036607_51037166
tx.23061	chr14	+	4957	23	FSM	ENSMUSG00000004562.17	ENSMUST00000182061.8	4756	23	-195	-6	17	0	multi-exon	FALSE	canonical	3	11	junction_3	6.51951932518073	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGAGCTCGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	52222192	52243086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242445_52242493_52242797
tx.23062	chr14	+	4994	24	FSM	ENSMUSG00000004562.17	ENSMUST00000093813.12	5621	24	5	622	-1	0	multi-exon	FALSE	canonical	2	2	junction_21	8.41571129479579	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGAGCTCGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	52222299	52243086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242797
tx.23063	chr14	+	2754	9	ISM	ENSMUSG00000057132.17	ENSMUST00000180901.8	3212	12	4426	31	-4361	0	3prime_fragment	FALSE	canonical	0	0	junction_1	4.58087055045217	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAGTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	52378459	52398764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_52378731_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
tx.23064	chr14	-	2189	11	NNC	ENSMUSG00000000958.11	novel	2126	11	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	53.915118473393	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	54655291	54606898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655205
tx.23065	chr14	+	1148	14	FSM	ENSMUSG00000112858.3	ENSMUST00000220122.2	1095	14	-41	-12	3	1	multi-exon	FALSE	canonical	1	1	junction_2	6.68478799458475	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTTGTATGAGGGTA	NA	False	NA	NA	False	NA	NA	NA	55051609	55091564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55051743_55053942_55054044_55057594_55057670_55075569_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
tx.23066	chr14	+	1217	15	FSM	ENSMUSG00000112858.3	ENSMUST00000218311.2	1201	15	-3	-13	-3	0	multi-exon	TRUE	canonical	3	13	junction_1	4.37525509460387	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTGTATGAGGGTAT	NA	False	NA	NA	False	NA	NA	NA	55051594	55091565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55051743_55053942_55054044_55056993_55057047_55057594_55057670_55075569_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
tx.23067	chr14	-	1850	3	NIC	ENSMUSG00000057156.11	novel	597	2	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCACTTCTGTGTTTC	5578	False	NA	NA	False	NA	NA	NA	55101565	55093007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_55093169_55094217_55095739_55101397
tx.23068	chr14	-	2341	8	NIC	ENSMUSG00000022199.13	novel	2348	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1	junction_4	3.10365156891435	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATAGCCTGGACTTCC	NA	False	NA	NA	False	NA	NA	NA	55150560	55144202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150191_55150323
tx.23069	chr14	-	2341	8	NIC	ENSMUSG00000022199.13	novel	2348	10	NA	NA	2	2	intron_retention	FALSE	canonical	1	1	junction_4	3.06394436993246	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTGGACTTCCCTCCC	NA	False	NA	NA	False	NA	NA	NA	55150558	55144197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150188_55150323
tx.2307	chr11	+	2208	6	FSM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	361	4	-25	-4	multi-exon	FALSE	canonical	2	3	junction_1	4.60434577328853	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCTTTTTTGTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	3280761	3292967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3281005_3281914_3282032_3282108_3282229_3283208_3283413_3283504_3283584_3291522
tx.23070	chr14	-	1603	8	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	-6	1106	combination_of_known_junctions	FALSE	canonical	2	15	junction_5	121.452434629986	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGGTCATTCCTCCGAA	NA	False	NA	NA	False	NA	NA	NA	55919267	55916557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918456_55918547_55918681_55918769_55918846
tx.23071	chr14	-	955	4	ISM	ENSMUSG00000022218.17	ENSMUST00000002389.9	2791	15	7363	21	7363	-6	3prime_fragment	FALSE	canonical	3	204	junction_1	12.1928941054479	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGATGCTGTTTAGT	8165	False	NA	NA	False	NA	NA	NA	55943182	55937496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914
tx.23072	chr14	+	6359	35	FSM	ENSMUSG00000054509.8	ENSMUST00000161553.2	6387	35	28	0	28	0	multi-exon	FALSE	canonical	2	8	junction_14	4.43757157942172	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGATGCTGTCTCAGTG	1115	False	NA	NA	False	NA	NA	NA	56813103	56897251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_56813188_56821615_56821749_56823013_56823210_56825205_56825270_56825875_56825952_56827335_56827438_56827820_56827971_56829747_56829886_56830680_56830855_56832710_56832872_56835032_56835171_56835788_56835885_56839720_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56873183_56873280_56875304_56875428_56878711_56878775_56884630_56886407_56889704_56889805_56892938_56893072_56896694
tx.23073	chr14	-	2905	7	NIC	ENSMUSG00000040123.18	novel	5357	8	NA	NA	-4	404	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	28.8963665535998	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTGTTTTCTTGT	9069	False	NA	NA	False	NA	NA	NA	57048925	57030380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048790
tx.23074	chr14	+	3201	2	ISM	ENSMUSG00000021963.18	ENSMUST00000143600.2	521	3	321	-105	109	-75	3prime_fragment	FALSE	canonical	3	3117	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTTATGTAAAATATGAA	NA	False	NA	NA	False	NA	NA	NA	58036203	58039709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_58039074_58039378
tx.23075	chr14	-	5121	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-30	-72	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_12	63.4039080463938	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTTTTTTAATGGT	NA	False	NA	NA	False	NA	NA	NA	58127763	58070231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127542
tx.23076	chr14	-	3982	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	1	-79	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	93.8518335818042	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATTGTCTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	58127732	58070238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_58073012_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
tx.23077	chr14	-	4392	13	NIC	ENSMUSG00000071350.13	novel	2995	14	NA	NA	-2	1731	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	33.2498955721	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTCTCTCTATAATA	NA	False	NA	NA	False	NA	NA	NA	59678328	59637726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59678035
tx.23078	chr14	+	5822	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	3.46648653907957	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTCTAGTGATGCATC	NA	False	NA	NA	False	NA	NA	NA	60940400	61002000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_60940572_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
tx.23079	chr14	+	15205	9	NIC	ENSMUSG00000048279.20	novel	4581	8	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	3.93700393700591	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGACTGGTTATTT	NA	False	NA	NA	False	NA	NA	NA	61410429	61452945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_61410665_61410746_61410898_61416670_61416759_61418393_61418480_61421400_61421513_61427050_61427198_61428546_61430042_61430836_61430929_61440146
tx.2308	chr11	-	3706	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-15	2	-15	-2	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGACAGAGAGTGCCAA	9799	False	NA	NA	False	NA	NA	NA	3321391	3294257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
tx.23080	chr14	+	1703	2	FSM	ENSMUSG00000043157.9	ENSMUST00000055159.8	1482	2	-131	-90	-131	90	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCTTCCATCAGATCA	NA	False	NA	NA	False	NA	NA	NA	61547070	61549475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_61547387_61548088
tx.23081	chr14	-	6287	10	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	25	0	intron_retention	FALSE	canonical	2	5	junction_1	66.8881506050065	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATGGAATCTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	63781406	63757099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_63761667_63764323_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
tx.23082	chr14	-	6196	11	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	259	-7	intron_retention	FALSE	canonical	1	2	junction_10	85.7820494042897	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGCCGTATGGAATC	NA	False	NA	NA	False	NA	NA	NA	63781172	63757106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780506_63780573_63780906
tx.23083	chr14	+	2160	3	Antisense	novelGene_ENSMUSG00000021978.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	3	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGGTAGCACACAATA	NA	False	NA	NA	False	NA	NA	NA	65335588	65350120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_+_65335830_65338153_65338226_65348273
tx.23084	chr14	+	176	2	Antisense	novelGene_ENSMUSG00000021978.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATATATAAAATGA	NA	False	NA	NA	False	NA	NA	NA	65340670	65378620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_+_65340820_65378593
tx.23085	chr14	+	3397	8	NNC	ENSMUSG00000022032.15	novel	3179	8	NA	NA	61	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.5047921303271	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGTTGCTGATAAGTG	NA	False	NA	NA	False	NA	NA	NA	65913986	66002270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_65914057_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
tx.23086	chr14	-	3807	3	FSM	ENSMUSG00000085984.8	ENSMUST00000153646.8	764	3	-372	-2671	-372	2671	multi-exon	FALSE	canonical	3	12	junction_1	2	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGTTCTTTTAAAACT	NA	False	NA	NA	False	NA	NA	NA	66534950	66530111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_66533036_66533403_66533594_66534257
tx.23087	chr14	+	4756	4	NNC	ENSMUSG00000046204.15	novel	5518	3	NA	NA	-31	-970	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.7756811551038	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCGTGAGTTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	67148587	67157502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_67148743_67151755_67151933_67152770_67152900_67153207
tx.23088	chr14	-	4502	2	ISM	ENSMUSG00000048922.19	ENSMUST00000132705.8	2034	14	19959	9639	1083	4193	internal_fragment	FALSE	canonical	3	294	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCGGCTCAGATAGGTAA	649	False	NA	NA	False	NA	NA	NA	67933100	67927388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_67931204_67932413
tx.23089	chr14	+	4795	11	ISM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	-19	-1689	-19	-3	intron_retention	FALSE	canonical	3	52	junction_9	23.5253055240522	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGCCTGTTTCTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	67953691	67979607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825
tx.2309	chr11	-	4604	14	NIC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	120	junction_13	39.3946802043419	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGACAGAGAGTGCCAA	9800	False	NA	NA	False	NA	NA	NA	3321390	3294257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
tx.23090	chr14	-	1768	8	NNC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	-21	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	71.2609461695506	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	NA	False	NA	NA	NA	69944963	69934752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944845
tx.23091	chr14	+	2807	6	FSM	ENSMUSG00000022074.7	ENSMUST00000224533.2	2787	6	7	-27	7	27	multi-exon	FALSE	canonical	0	0	junction_5	22.5831795812724	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATTTGACCATGATGAT	NA	False	NA	NA	False	NA	NA	NA	70004940	70017162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169
tx.23092	chr14	-	1945	7	FSM	ENSMUSG00000044551.14	ENSMUST00000058240.14	1986	7	38	3	38	0	multi-exon	FALSE	canonical	2	3	junction_1	2.76887462097269	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGTGACTGTTAAATG	NA	False	NA	NA	False	NA	NA	NA	70396913	70391856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70392726_70393298_70393406_70393609_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
tx.23093	chr14	-	4924	10	FSM	ENSMUSG00000022094.16	ENSMUST00000068044.14	4926	10	4	-2	4	2	multi-exon	FALSE	canonical	2	7	junction_9	2.18298696715428	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAGTCCCAAGTGTCG	NA	False	NA	NA	False	NA	NA	NA	70588870	70540915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70551049_70551220_70553886_70554074_70556110_70556390_70568717_70568816_70588728
tx.23094	chr14	+	2692	5	NNC	ENSMUSG00000003469.10	novel	2838	5	NA	NA	-14256	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1.6393596310755	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGTCTTGGTCCATTTA	NA	False	NA	NA	False	NA	NA	NA	70680659	70706268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_70680846_70699178_70699364_70700679_70700855_70702889_70703008_70704240
tx.23095	chr14	+	5729	19	FSM	ENSMUSG00000022096.15	ENSMUST00000161069.8	5607	19	526	-648	157	0	multi-exon	FALSE	canonical	0	0	junction_1	6.15539510420646	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTTCCGAGCATTTAA	NA	False	NA	NA	False	NA	NA	NA	70791652	70810988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_70792548_70793787_70794441_70795068_70795850_70797078_70797230_70797312_70797504_70799251_70799417_70800768_70800859_70801006_70801123_70802741_70802824_70803468_70803633_70803749_70803987_70804219_70804386_70804588_70804659_70804941_70805073_70805215_70805336_70805416_70805533_70808817_70808983_70809347_70809477_70809681
tx.23096	chr14	-	2692	14	NIC	ENSMUSG00000022099.18	novel	2643	16	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	54.765773443168	113	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	NA	False	NA	NA	NA	70864503	70841109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_70842295_70842407_70842489_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
tx.23097	chr14	-	2568	14	NIC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	67.7670042417792	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	NA	False	NA	NA	NA	70873463	70841112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_70842295_70842407_70842489_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873259
tx.23098	chr14	+	5353	4	NIC	ENSMUSG00000022102.14	novel	1795	5	NA	NA	-1571	-1	intron_retention	FALSE	canonical	1	3	junction_1	2.05480466765633	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTGTGGCCTGTAATG	NA	False	NA	NA	False	NA	NA	NA	71009140	71015934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_71013188_71013423_71013512_71014255_71014438_71014898
tx.23099	chr14	-	6016	25	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_24	38.9581105162969	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	NA	False	NA	NA	NA	72947456	72775387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72947157
tx.231	chr1	+	2773	5	FSM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	2	-3	2	3	multi-exon	FALSE	canonical	3	156	junction_4	15.4757875405422	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTGTTTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	43484912	43609678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020_43593743_43608307
tx.2310	chr11	-	3511	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	1	2	1	-2	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGACAGAGAGTGCCAA	NA	False	NA	NA	False	NA	NA	NA	3359173	3294257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
tx.23100	chr14	+	6158	19	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	32.4925442540095	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	75521808	75581866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
tx.23101	chr14	-	4190	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	16	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	31.855562457821	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGTTTGTTATGTTAT	NA	False	NA	NA	False	NA	NA	NA	75991982	75939782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977012_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
tx.23102	chr14	-	2922	4	ISM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	18095	-1	3386	1	3prime_fragment	FALSE	canonical	3	40	junction_3	2.86744175568088	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTTACAGTCATTT	4515	False	NA	NA	False	NA	NA	NA	76006382	75997555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255
tx.23103	chr14	-	2771	3	ISM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	20018	1	5309	-1	3prime_fragment	FALSE	canonical	3	43	junction_1	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATGGCTTACAGTCAT	6438	False	NA	NA	False	NA	NA	NA	76004459	75997557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_76000131_76000768_76000850_76004342
tx.23104	chr14	-	3969	7	NIC	ENSMUSG00000022008.5	novel	5389	8	NA	NA	-64	-1378	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	50.2427440864184	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATCTTAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	76348264	76325053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76343493_76343593_76344760_76344894_76348056
tx.23105	chr14	-	3730	18	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	14	-304	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	52.8182887482885	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTGTTTATATCTTT	NA	False	NA	NA	False	NA	NA	NA	79628204	79571947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596932_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
tx.23106	chr14	+	5293	13	NNC	ENSMUSG00000022019.17	novel	2657	14	NA	NA	-20	4443	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	28.009918878061	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTTAAGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	87654054	87756645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87753656
tx.23107	chr14	+	3965	2	ISM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	89118	7	-33342	-7	3prime_fragment	FALSE	canonical	3	97	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAACTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	87743192	87752195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_87744043_87749080
tx.23108	chr14	+	2812	3	NNC	ENSMUSG00000110273.2	novel	449	3	NA	NA	-57	2327	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTAGTCAATTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	100523543	100532338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_100523605_100529498_100529661_100529749
tx.23109	chr14	-	1842	4	NNC	ENSMUSG00000075486.11	novel	1090	4	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	201.894912158666	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGTGGTGAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	101877914	101870417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_101871829_101874389_101874543_101877547_101877736_101877824
tx.2311	chr11	-	2125	5	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	7440	1	4116	-1	3prime_fragment	FALSE	canonical	3	202	junction_1	18.3354165483089	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACAGAGAGTGCCAAA	NA	False	NA	NA	False	NA	NA	NA	3298701	3294256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593
tx.23110	chr14	-	1620	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	218.5	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACCACTCCTGTGGTGA	NA	False	NA	NA	False	NA	NA	NA	101877882	101870423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_101871829_101874389_101874543_101877820
tx.23111	chr14	-	6989	4	ISM	ENSMUSG00000022124.16	ENSMUST00000132004.8	2534	5	-580	-648	-1	-2	intron_retention	FALSE	canonical	3	39	junction_3	69.9062864761739	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTTGTATTTTTATA	9812	False	NA	NA	False	NA	NA	NA	103336991	103318471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772
tx.23112	chr14	-	7588	23	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	3633	22	NA	NA	23	0	multi-exon	FALSE	canonical	3	71	junction_2	45.2615904520371	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTTAATGTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	105414736	105344186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
tx.23113	chr14	+	2532	2	NNC	ENSMUSG00000022113.7	novel	584	2	NA	NA	26	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGCTTATATTATCTGAA	NA	False	NA	NA	False	NA	NA	NA	106343658	106346714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_106343774_106344297
tx.23114	chr14	-	8084	54	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-55	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	12.5739676944609	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAAGTTGGCAGTTATC	NA	False	NA	NA	False	NA	NA	NA	122035304	121779455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
tx.23115	chr14	+	930	2	FSM	ENSMUSG00000071229.4	ENSMUST00000045976.7	913	2	-19	2	-19	-2	multi-exon	FALSE	canonical	3	25	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTGTTCTTTGTAACT	NA	False	NA	NA	False	NA	NA	NA	122272066	122275830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_122272425_122275258
tx.23116	chr14	+	2390	23	NIC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_16	27.256245019481	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTT	NA	False	NA	NA	False	NA	NA	NA	122771722	123127237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
tx.23118	chr15	-	3641	3	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	3.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTGTTGTATTATCT	NA	False	NA	NA	False	NA	NA	NA	6074123	6054170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_6057514_6073729_6073988_6074083
tx.23119	chr15	+	9377	39	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_31	27.7495227180637	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGGTGGTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	6737867	6829879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6817130_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
tx.2312	chr11	-	2764	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	24	-1	-5	1	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	225	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTGGAGCTTGTGT	6839	False	NA	NA	False	NA	NA	NA	3402339	3365980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
tx.23122	chr15	-	10389	47	FSM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	-168	-798	-168	798	multi-exon	TRUE	canonical	2	7	junction_43	23.7522658356028	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTACTTCCTATGTGG	NA	False	NA	NA	False	NA	NA	NA	8474115	8319302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
tx.23123	chr15	+	7956	18	FSM	ENSMUSG00000039704.9	ENSMUST00000090380.6	3210	18	-117	-4629	-2	-9	multi-exon	FALSE	canonical	2	6	junction_9	7.56242761411209	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTACAGTCTTGTTGAT	30	False	NA	NA	False	NA	NA	NA	9140634	9202560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175345_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
tx.23125	chr15	-	6708	6	ISM	ENSMUSG00000022197.17	ENSMUST00000075317.12	10756	24	216557	0	36381	0	3prime_fragment	TRUE	canonical	0	0	junction_5	1.35646599662505	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCATTGTTGTGCG	NA	False	NA	NA	False	NA	NA	NA	12376085	12359796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_12362326_12365713_12365849_12367895_12368167_12368704_12368807_12371674_12371793_12372532
tx.23126	chr15	-	4557	10	ISM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	48465	9	-10597	-9	3prime_fragment	FALSE	canonical	3	87	junction_6	20.7620261148825	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTGTTTTCTTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	31482734	31456045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643
tx.23127	chr15	-	4824	12	ISM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	45972	8	-13090	-8	3prime_fragment	FALSE	canonical	3	82	junction_10	21.0163258066966	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTCTTTTTGGCT	NA	False	NA	NA	False	NA	NA	NA	31485227	31456044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091
tx.23128	chr15	+	5065	23	FSM	ENSMUSG00000022231.11	ENSMUST00000067458.7	10809	23	-56	5800	-53	905	multi-exon	TRUE	canonical	0	0	junction_1	0.868407871570127	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTTGCAGTCACACTG	33	False	NA	NA	False	NA	NA	NA	32244902	32690687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_32245446_32347365_32347463_32417457_32417656_32460364_32460465_32474523_32474570_32538810_32538874_32548860_32548960_32550394_32550609_32562636_32562923_32568857_32568994_32574961_32575167_32609368_32609577_32618954_32619073_32628287_32628470_32631399_32631544_32641112_32641261_32669550_32669777_32673462_32673682_32679240_32679412_32681611_32681768_32682452_32682501_32686782_32686995_32689441
tx.23129	chr15	+	3889	3	ISM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	29128	-899	-1694	888	3prime_fragment	FALSE	canonical	3	55	junction_1	4	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTGTCTGGTTGATC	NA	False	NA	NA	False	NA	NA	NA	34524596	34531682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_34526464_34529028_34529377_34530008
tx.2313	chr11	-	1847	8	ISM	ENSMUSG00000034570.13	ENSMUST00000110018.8	2384	14	3860	3	1223	-3	3prime_fragment	FALSE	canonical	1	2	junction_6	1.45686271816937	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCTTGGCTCCTTCCTG	2033	False	NA	NA	False	NA	NA	NA	3450911	3444384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_3445167_3445346_3445452_3445559_3445638_3445784_3445923_3449596_3449781_3449890_3450001_3450137_3450250_3450573
tx.23130	chr15	-	1754	11	FSM	ENSMUSG00000038879.9	ENSMUST00000040791.9	4331	11	458	2119	-11	588	multi-exon	FALSE	canonical	2	3	junction_3	2.40831891575846	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTACAGGGGTGTTC	291	False	NA	NA	False	NA	NA	NA	34678900	34575063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_34575718_34577715_34577811_34578853_34578918_34582866_34582956_34584775_34584912_34600160_34600258_34609318_34609441_34625117_34625178_34648811_34648984_34650527_34650597_34678704
tx.23131	chr15	+	3660	19	FSM	ENSMUSG00000037617.13	ENSMUST00000047348.11	3646	19	-24	10	-24	1	multi-exon	FALSE	canonical	2	3	junction_1	18.7185950987016	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGAGTATGCCTGC	158	False	NA	NA	False	NA	NA	NA	36179489	36235757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_36179729_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
tx.23132	chr15	+	732	2	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTAGTCGTGGTG	NA	False	NA	NA	False	NA	NA	NA	36560398	36566203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_+_36560637_36565709
tx.23133	chr15	-	5162	2	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGAGTCTCTGATT	NA	False	NA	NA	False	NA	NA	NA	36683125	36671753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_36673613_36679822
tx.23134	chr15	-	3294	5	NIC	ENSMUSG00000051359.16	novel	3538	7	NA	NA	73283	2	intron_retention	FALSE	canonical	1	2	junction_2	2.12132034355964	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATTGTCTGGAACATGA	NA	False	NA	NA	False	NA	NA	NA	37661331	37366508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_37369170_37372359_37372466_37397300_37397698_37563634_37563709_37661275
tx.23135	chr15	+	1239	4	FSM	ENSMUSG00000054196.8	ENSMUST00000067072.5	1166	4	-73	0	-73	0	multi-exon	FALSE	canonical	3	14	junction_1	1.88561808316413	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGTTTATTTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	38940253	38950516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_38940555_38943877_38944100_38947660_38947878_38950017
tx.23137	chr15	-	2336	3	NNC	ENSMUSG00000022304.14	novel	2466	10	NA	NA	15927	-407	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTTCAGCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	39640720	39632289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_39634502_39640471_39640539_39640663
tx.23138	chr15	+	1599	4	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_3	2.94392028877595	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTGTCTTGCCTTAA	NA	False	NA	NA	False	NA	NA	NA	41210824	41215815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_+_41210883_41212202_41212325_41212702_41212780_41214473
tx.23139	chr15	-	3022	10	FSM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	-11	2066	4	842	multi-exon	FALSE	canonical	3	89	junction_5	79.6338844685826	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTAGTGATGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	44291280	44238624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
tx.2314	chr11	+	711	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	143	junction_4	6.04152298679729	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	3464862	3467351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
tx.23140	chr15	-	9773	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-361	447	-11	-447	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGACGGCTTTGGTAT	9957	False	NA	NA	False	NA	NA	NA	50753448	50518594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
tx.23141	chr15	+	7529	3	NIC	ENSMUSG00000038622.9	novel	1007	4	NA	NA	6	-131	intron_retention	FALSE	canonical	3	604	junction_1	13	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTACTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	52575843	52593829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_52582901_52584419_52584525_52593462
tx.23142	chr15	+	2185	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	-13	14	-13	10	multi-exon	FALSE	canonical	3	8	junction_1	7	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGGGCCAACTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	61857399	61862209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_61857801_61859358_61860128_61861194
tx.23143	chr15	+	2967	6	NIC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	-281	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	8.29457654133109	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTTTAAGCGTGATTT	NA	False	NA	NA	False	NA	NA	NA	61909553	62122820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62121006
tx.23144	chr15	-	5967	29	FSM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	-53	-1677	-53	-7	multi-exon	FALSE	canonical	3	31	junction_27	27.267640798094	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCCAAGCATCTGACAT	NA	False	NA	NA	False	NA	NA	NA	64254658	63958712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
tx.23145	chr15	+	3258	9	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	18.1916876622264	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	3831	False	NA	NA	False	NA	NA	NA	66449409	66483465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
tx.23146	chr15	+	3180	8	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	21.0558053461631	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	3831	False	NA	NA	False	NA	NA	NA	66449409	66483465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
tx.23147	chr15	+	6476	20	NIC	ENSMUSG00000072501.6	novel	6584	20	NA	NA	7	-180	combination_of_known_junctions	FALSE	canonical	1	4	junction_16	20.1868007670298	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGTCTTGGTTAATAG	3857	False	NA	NA	False	NA	NA	NA	66449435	66516924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502895_66504554_66504751_66508532_66508882_66511761_66511925_66513646
tx.23148	chr15	-	9212	5	ISM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	71039	2587	158	-2587	3prime_fragment	FALSE	canonical	3	89	junction_2	5.52268050859363	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGTGAGTTTCAACTGC	NA	False	NA	NA	False	NA	NA	NA	72985745	72970279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556
tx.23149	chr15	-	5587	2	ISM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	77573	5784	6692	5705	3prime_fragment	FALSE	canonical	3	100	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTCTGGCTTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	72979211	72973476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_72978866_72979013
tx.2315	chr11	-	3425	22	NIC	ENSMUSG00000020439.18	novel	3386	22	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_20	24.580101828424	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8156	False	NA	NA	False	NA	NA	NA	3489273	3467521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
tx.23150	chr15	+	188	2	Antisense	novelGene_ENSMUSG00000115602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	363	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCCTCCAGCCAGGCTTG	NA	False	NA	NA	False	NA	NA	NA	73275014	73282499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_+_73275065_73282361
tx.23151	chr15	-	7937	8	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	27	5	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	100.412618119194	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGTCTTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	73517584	73449267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73516742
tx.23152	chr15	-	3053	3	FSM	ENSMUSG00000022602.15	ENSMUST00000110009.4	3054	3	1	0	-1	0	multi-exon	FALSE	canonical	3	15	junction_2	19	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	NA	False	NA	NA	NA	74544418	74540931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_74541843_74542028_74542166_74542413
tx.23153	chr15	-	4005	4	FSM	ENSMUSG00000022594.15	ENSMUST00000023259.15	4023	4	14	4	-8	-4	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTTTCTCTCAT	9954	False	NA	NA	False	NA	NA	NA	74624881	74619704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_74623277_74623391_74623494_74623703_74623887_74624733
tx.23154	chr15	+	3220	3	ISM	ENSMUSG00000022587.15	ENSMUST00000187284.7	654	4	453	-575	-36	0	3prime_fragment	FALSE	canonical	3	491	junction_2	79.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8351	False	NA	NA	False	NA	NA	NA	74827465	74831180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_74829727_74830117_74830238_74830341
tx.23155	chr15	+	7509	5	FSM	ENSMUSG00000047728.14	ENSMUST00000185307.7	758	5	-51	-6700	-51	5989	multi-exon	FALSE	canonical	0	0	junction_1	2.73861278752583	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTGTCTTGTTATCTC	1179	False	NA	NA	False	NA	NA	NA	75088173	75100499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_75088262_75088532_75088604_75089563_75089681_75092469_75092690_75093486
tx.23156	chr15	-	5424	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_25	73.294062459634	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTGTCCTTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	75941594	75919010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
tx.23157	chr15	-	3381	17	NIC	ENSMUSG00000075590.5	novel	3192	18	NA	NA	-100	0	intron_retention	FALSE	canonical	0	0	junction_3	2.06155281280883	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGCATGGTCTGACATA	NA	False	NA	NA	False	NA	NA	NA	75963576	75957443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75960713_75960847_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962392_75962486_75962589_75962656_75962780_75963219
tx.23158	chr15	+	1945	7	NIC	ENSMUSG00000022564.8	novel	1725	7	NA	NA	-1	3	intron_retention	FALSE	canonical	3	13	junction_1	29.8533452434099	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTCTCCTTGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	76130968	76134107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76131101_76131839_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
tx.23159	chr15	+	2354	3	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	27	-4	intron_retention	FALSE	canonical	3	106	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCCAGACTCTCCTGCA	3571	False	NA	NA	False	NA	NA	NA	76253124	76255633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76254454_76254531_76254655_76254731
tx.2316	chr11	-	3320	21	FSM	ENSMUSG00000020439.18	ENSMUST00000020721.15	3335	21	16	-1	16	1	multi-exon	FALSE	canonical	3	70	junction_20	9.90908673894825	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8153	False	NA	NA	False	NA	NA	NA	3489276	3467521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
tx.23160	chr15	+	2049	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	10	3	intron_retention	FALSE	canonical	3	114	junction_9	18.1199161407206	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCGTTTTCTTTGTGTT	3167	False	NA	NA	False	NA	NA	NA	76460622	76480012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
tx.23161	chr15	-	3906	21	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	18	0	intron_retention	FALSE	canonical	3	7	junction_9	20.2136092769203	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTCTGGTAACATAG	NA	False	NA	NA	False	NA	NA	NA	76594715	76587752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
tx.23162	chr15	-	3778	21	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	18	-2	intron_retention	FALSE	canonical	0	0	junction_19	20.8731286586367	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTTCTGGTAACAT	NA	False	NA	NA	False	NA	NA	NA	76594715	76587754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594477_76594512_76594592
tx.23163	chr15	+	5023	3	FSM	ENSMUSG00000033728.15	ENSMUST00000142506.2	3943	3	-33	-1047	1	-4	multi-exon	FALSE	canonical	3	39	junction_1	41.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTTGGTTATTCTGGA	NA	False	NA	NA	False	NA	NA	NA	76594839	76601895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76595128_76597066_76598186_76598279
tx.23164	chr15	-	6267	4	ISM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	66240	-2485	-26286	2485	3prime_fragment	FALSE	canonical	3	56	junction_1	4.10960933531265	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCGTGACTGACTTC	3836	False	NA	NA	False	NA	NA	NA	76636089	76615171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_76619639_76620655_76622010_76625712_76625797_76635727
tx.23165	chr15	-	4113	5	NNC	ENSMUSG00000022526.9	novel	4036	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.01338006955277	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTGTAGTGATGGT	NA	False	NA	NA	False	NA	NA	NA	76755606	76735808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_76738815_76750441_76750548_76754006_76754121_76754481_76754615_76754852
tx.23166	chr15	+	4417	4	ISM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	14	0	14	0	intron_retention	FALSE	canonical	3	69	junction_1	14.8174071805952	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	76763472	76776595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430
tx.23167	chr15	-	6576	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	49.3316274559802	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	NA	False	NA	NA	NA	77190812	76963189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77115586_77115638_77190563
tx.23168	chr15	-	6853	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	58.5225502596127	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	NA	False	NA	NA	NA	77191140	76963189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77190563
tx.23169	chr15	-	3313	7	NIC	ENSMUSG00000018169.13	novel	1865	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	144	junction_4	12.3017613914973	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	78657676	78640081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_78640845_78641496_78641583_78643392_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
tx.2317	chr11	-	6240	20	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	19	0	intron_retention	FALSE	canonical	3	70	junction_19	10.1643012249038	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8156	False	NA	NA	False	NA	NA	NA	3489273	3467522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
tx.23170	chr15	+	2760	16	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	356	2	-5	-2	intron_retention	FALSE	canonical	3	379	junction_6	54.8406175506197	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	NA	False	NA	NA	False	NA	NA	NA	78761745	78778783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738
tx.23171	chr15	+	1313	6	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	182.547528057764	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	78819386	78825065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_78819895_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
tx.23172	chr15	-	1212	2	ISM	ENSMUSG00000115867.2	ENSMUST00000229708.2	1561	3	-2	881	-2	5	5prime_fragment	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	78909984	78900409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_78901333_78909695
tx.23173	chr15	+	1944	3	FSM	ENSMUSG00000042622.15	ENSMUST00000163691.3	1902	3	-38	-4	-38	0	multi-exon	FALSE	canonical	3	16	junction_1	8	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTGTATGTCTTGGAC	2771	False	NA	NA	False	NA	NA	NA	79232225	79243276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79232447_79241166_79241234_79241620
tx.23174	chr15	-	3309	2	ISM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	14533	4	14347	-4	3prime_fragment	FALSE	canonical	3	60	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTGTGAATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	79416409	79411940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_79414719_79415878
tx.23175	chr15	+	4357	17	FSM	ENSMUSG00000047888.11	ENSMUST00000228124.2	3407	17	-1085	135	-1085	-135	multi-exon	FALSE	canonical	1	2	junction_1	6.25468574350462	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTAACTTTGTTTGCA	1373	False	NA	NA	False	NA	NA	NA	80763813	80814074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80765408_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
tx.23176	chr15	-	329	2	Antisense	novelGene_ENSMUSG00000022407.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTGCTTACATATAATA	NA	False	NA	NA	False	NA	NA	NA	80836322	80835780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_80835913_80836125
tx.23177	chr15	-	183	2	Antisense	novelGene_ENSMUSG00000022394.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	459	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGTTATATGTAAGT	NA	False	NA	NA	False	NA	NA	NA	81555076	81543920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_81544055_81555027
tx.23178	chr15	-	1886	4	NNC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-39	242	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	36.3807030657127	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGATCGATCATCAGTCAT	NA	False	NA	NA	False	NA	NA	NA	82097055	82091152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_82091792_82091951_82092099_82092663_82092798_82096089
tx.23179	chr15	-	2396	3	NIC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-27	242	intron_retention	FALSE	canonical	3	79	junction_2	2.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGATCGATCATCAGTCAT	NA	False	NA	NA	False	NA	NA	NA	82097043	82091152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_82091749_82091951_82092798_82096089
tx.2318	chr11	-	6703	2	FSM	ENSMUSG00000056579.19	ENSMUST00000132077.4	6719	2	6	10	0	-1	multi-exon	FALSE	canonical	3	2652	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGAGTTGGGTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	3597530	3589794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3595524_3596556
tx.23180	chr15	-	1889	10	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	84.6325390536445	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGTACTATGACCTGTG	1344	False	NA	NA	False	NA	NA	NA	82223027	82213730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221698_82222438_82222516_82222952
tx.23181	chr15	+	2824	2	FSM	ENSMUSG00000049687.6	ENSMUST00000050349.3	2745	2	-43	-36	-43	3	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATTCA	NA	False	NA	NA	False	NA	NA	NA	82225336	82229947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_82225473_82227259
tx.23182	chr15	-	3495	2	FSM	ENSMUSG00000022450.7	ENSMUST00000230589.2	440	2	-3042	-13	5	-8	multi-exon	FALSE	canonical	3	3916	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTTCCTGTGGTCTC	6285	False	NA	NA	False	NA	NA	NA	82238450	82234348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_82234573_82235179
tx.23183	chr15	+	3919	10	NIC	ENSMUSG00000058586.13	novel	2577	11	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	56	junction_1	10.4468082431495	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTCCAAGTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	82984448	83000871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
tx.23184	chr15	-	4543	3	FSM	ENSMUSG00000048755.10	ENSMUST00000229724.2	688	3	-2826	-1029	22	-1	multi-exon	FALSE	canonical	3	138	junction_2	44	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGCTCTCTCTCTCTGT	8073	False	NA	NA	False	NA	NA	NA	83439914	83430998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83432144_83433318_83433537_83436734
tx.23185	chr15	-	4853	6	NIC	ENSMUSG00000018865.10	novel	2383	7	NA	NA	-10	1	intron_retention	FALSE	canonical	3	68	junction_1	7.23878442834154	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTTTGTCTGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	83989820	83960296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
tx.23186	chr15	+	1517	12	NIC	ENSMUSG00000078954.10	novel	1527	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	58.989143138924	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTGTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	84604253	84656407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_84604309_84617096_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
tx.23188	chr15	-	2688	11	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.6447820494434	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCAGTTTGCCCA	NA	False	NA	NA	False	NA	NA	NA	84872200	84832198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_84832857_84832950_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
tx.23189	chr15	-	3877	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-17	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_15	32.4523789545692	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTTTACTCTGGTCTTG	NA	False	NA	NA	False	NA	NA	NA	85016182	84948890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
tx.2319	chr11	-	6400	3	FSM	ENSMUSG00000056579.19	ENSMUST00000153313.9	5112	3	-1288	0	-6	0	multi-exon	FALSE	canonical	3	2126	junction_1	263	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTTGGGTTTCTATT	NA	False	NA	NA	False	NA	NA	NA	3598818	3589793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3593180_3594771_3595524_3596556
tx.23190	chr15	+	2473	4	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	12343	0	12343	0	3prime_fragment	FALSE	canonical	3	576	junction_1	61.8834029086601	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	9600	False	NA	NA	False	NA	NA	NA	85756489	85760774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_85758078_85759175_85759420_85759736_85759953_85760349
tx.23191	chr15	-	11117	35	FSM	ENSMUSG00000016028.12	ENSMUST00000016172.10	11305	35	188	0	188	0	multi-exon	TRUE	canonical	3	19	junction_1	10.8831478247056	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCTGTGCTGGGTGGT	NA	False	NA	NA	False	NA	NA	NA	85918216	85783129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_85784907_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
tx.23192	chr15	-	4020	11	NIC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	259	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	7.37902432574931	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCCTCCCCTCATCC	NA	False	NA	NA	False	NA	NA	NA	86070083	86023331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86069707
tx.23193	chr15	-	1194	2	NNC	ENSMUSG00000093394.2	novel	1234	2	NA	NA	327	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAATGTGTGACAGTTT	NA	False	NA	NA	False	NA	NA	NA	88775359	88773980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_88775099_88775283
tx.23194	chr15	-	1998	11	FSM	ENSMUSG00000022610.11	ENSMUST00000230266.2	1928	11	-69	-1	-18	0	multi-exon	FALSE	canonical	2	7	junction_5	1.79164728671689	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTGGCCCCAT	NA	False	NA	NA	False	NA	NA	NA	89024924	89014786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330
tx.23195	chr15	-	1902	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	-95	1	-13	0	multi-exon	FALSE	canonical	2	7	junction_5	1.87634249459548	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTTGTGTGGCCCCA	NA	False	NA	NA	False	NA	NA	NA	89024919	89014787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
tx.23196	chr15	-	6297	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	63	0	intron_retention	FALSE	canonical	0	0	junction_36	89.5514672005868	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9206	False	NA	NA	False	NA	NA	NA	89064928	89039751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
tx.23197	chr15	-	3515	11	ISM	ENSMUSG00000022614.9	ENSMUST00000230112.2	2815	13	4	-8	4	-1	intron_retention	TRUE	canonical	3	177	junction_4	26.2442374627269	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	89239832	89235342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285
tx.23198	chr15	-	3236	3	FSM	ENSMUSG00000022620.15	ENSMUST00000168270.2	704	3	-1818	-714	24	2	multi-exon	FALSE	canonical	3	72	junction_1	6	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89360292	89356728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89357975_89358209_89358338_89358430
tx.23199	chr15	+	2654	12	NIC	ENSMUSG00000078932.9	novel	2041	13	NA	NA	-74	716	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	8.52221210564216	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATTTCTCTTGATAA	NA	False	NA	NA	False	NA	NA	NA	91083622	91145813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
tx.232	chr1	+	4199	4	ISM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	5	13133	5	3320	5prime_fragment	FALSE	canonical	3	160	junction_2	13.8162545173751	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTGTCAGTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	43484915	43596542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020
tx.2320	chr11	-	3773	2	FSM	ENSMUSG00000056579.19	ENSMUST00000226724.2	3853	2	2747	-2667	1973	-1	multi-exon	FALSE	canonical	3	2126	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGAGTTGGGTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	3595159	3589794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3593180_3594771
tx.23200	chr15	-	933	9	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	285.365965691426	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTGGAATAGTGACTGG	NA	False	NA	NA	False	NA	NA	NA	93296214	93283987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93291587_93291646_93293467_93293497_93295050_93295137_93296043
tx.23201	chr15	-	4129	8	NIC	ENSMUSG00000036158.13	novel	4085	8	NA	NA	-44	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1.38505138783324	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGAGTCCGCATCTTCC	NA	False	NA	NA	False	NA	NA	NA	93493816	93396991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_93399185_93400840_93401708_93402909_93403097_93406433_93406638_93407108_93407247_93408551_93408666_93410330_93410515_93493574
tx.23202	chr15	+	2009	9	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	10105	411	10076	-411	3prime_fragment	FALSE	canonical	1	2	junction_8	12.598983093885	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAAGCTGTCTGAGGGG	NA	False	NA	NA	False	NA	NA	NA	94451628	94465776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
tx.23203	chr15	-	1252	2	ISM	ENSMUSG00000045608.8	ENSMUST00000229611.2	477	3	-40	-381	-40	381	intron_retention	FALSE	canonical	3	36	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATATGGAACAAATTC	NA	False	NA	NA	False	NA	NA	NA	95530749	95522237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_95522899_95530158
tx.23204	chr15	+	5972	15	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-681	31816	-626	13393	5prime_fragment	FALSE	canonical	3	74	junction_13	12.5795428358579	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATCGGAGAAGAACTTT	NA	False	NA	NA	False	NA	NA	NA	96184772	96271057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800
tx.23205	chr15	-	1032	3	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	16	junction_1	0.5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGAGTTTCTAGAATTT	1464	False	NA	NA	False	NA	NA	NA	97029749	97026299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_97027102_97029108_97029265_97029675
tx.23206	chr15	+	6869	2	ISM	ENSMUSG00000081534.4	ENSMUST00000230531.2	702	3	5901	-746	-7	558	3prime_fragment	FALSE	canonical	3	145	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGGGTGTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	97682301	97689686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_97687952_97688467
tx.23207	chr15	-	2682	15	ISM	ENSMUSG00000022475.20	ENSMUST00000079838.14	3985	25	23730	19	-131	-2	3prime_fragment	FALSE	canonical	2	9	junction_9	5.10501953863018	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTTTTATTTGCTTTA	169	False	NA	NA	False	NA	NA	NA	97705645	97690563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474
tx.23208	chr15	-	4150	7	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	31299	77	-17313	-77	3prime_fragment	FALSE	canonical	0	0	junction_4	0.957427107756338	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGATGCTCACACTT	NA	False	NA	NA	False	NA	NA	NA	97774892	97752382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997_97765170_97767198_97767305_97767526_97767712_97774604
tx.23209	chr15	+	1372	8	NIC	ENSMUSG00000052369.9	novel	1455	8	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.5683069266455	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGCACTGTCTCTGAC	7705	False	NA	NA	False	NA	NA	NA	97862134	97868153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_97862161_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
tx.2321	chr11	+	5738	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	34	-1	intron_retention	FALSE	canonical	2	20	junction_1	117.313921650492	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	NA	False	NA	NA	NA	3599224	3640476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
tx.23210	chr15	+	3888	2	Antisense	novelGene_ENSMUSG00000022483.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTTCTCTCTGATGT	NA	False	NA	NA	False	NA	NA	NA	97891046	97895555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_+_97894135_97894755
tx.23211	chr15	-	3930	7	ISM	ENSMUSG00000048154.18	ENSMUST00000178486.9	19805	55	31635	3	-2384	0	3prime_fragment	FALSE	canonical	3	7	junction_3	33.8004766567311	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCCTCTGTCCCATGA	5224	False	NA	NA	False	NA	NA	NA	98737429	98729552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_98732474_98732596_98732706_98732788_98732863_98733062_98733349_98734955_98735087_98735175_98735313_98737157
tx.23212	chr15	-	3903	6	ISM	ENSMUSG00000023009.15	ENSMUST00000023747.14	4853	13	29862	-1	-3349	1	3prime_fragment	TRUE	canonical	3	19	junction_2	7.31026675299883	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGGCAGCCCCCC	NA	False	NA	NA	False	NA	NA	NA	99325767	99319914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433
tx.23213	chr15	+	1573	4	FSM	ENSMUSG00000044217.18	ENSMUST00000169082.3	1797	4	216	8	149	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTGCCTTCATCTCCC	NA	False	NA	NA	False	NA	NA	NA	99488878	99492702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99489516_99490542_99490708_99491126_99491211_99492015
tx.23214	chr15	+	2330	3	ISM	ENSMUSG00000023019.13	ENSMUST00000023760.13	2861	8	4245	1	1764	-1	3prime_fragment	FALSE	canonical	2	2	junction_1	0.5	2	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGAAGAGTTGGGGG	NA	False	NA	NA	False	NA	NA	NA	99619640	99622885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_99620050_99620336_99620444_99621071
tx.23215	chr15	+	8925	38	FSM	ENSMUSG00000023026.17	ENSMUST00000100203.10	8914	38	-10	-1	-10	1	multi-exon	FALSE	canonical	2	4	junction_7	10.5011043281662	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTAATTCTTAAACC	4847	False	NA	NA	False	NA	NA	NA	99936534	100117355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053038_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
tx.23216	chr15	+	6327	18	ISM	ENSMUSG00000023026.17	ENSMUST00000023768.14	4320	33	26958	-3811	-17586	4	3prime_fragment	FALSE	canonical	3	41	junction_2	8.13765649847653	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAATTCTTAAACCTTG	4121	False	NA	NA	False	NA	NA	NA	100079234	100117358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
tx.23217	chr15	-	3209	2	ISM	ENSMUSG00000044636.7	ENSMUST00000061457.7	4375	5	10961	0	10961	0	3prime_fragment	FALSE	canonical	3	35	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGGTTCTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	100382408	100377450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_100380582_100382330
tx.23218	chr15	-	3241	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	27.8291613639761	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	100449881	100400677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
tx.23219	chr15	-	4905	10	NIC	ENSMUSG00000009739.18	novel	4953	11	NA	NA	-76	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.7201614427986	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	100497941	100473198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100483755_100484010_100484524_100484654_100485669_100485792_100489721_100489915_100491853_100491947_100497643
tx.2322	chr11	+	5619	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	36	1	36	-1	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	470	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	NA	False	NA	NA	NA	3599226	3640476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
tx.23220	chr15	-	1090	6	ISM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	2551	3	-6	1	3prime_fragment	FALSE	canonical	2	9	junction_4	10.6695829346793	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGCTTGCATTTAT	8436	False	NA	NA	False	NA	NA	NA	100583251	100572304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014
tx.23221	chr15	+	3085	11	NNC	ENSMUSG00000023033.15	novel	11436	27	NA	NA	-13	1208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.195689254687	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATATAAATAAATAAAAT	6956	False	NA	NA	False	NA	NA	NA	100768812	100873856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857483_100857576_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303
tx.23222	chr15	+	3362	15	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-19	753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.6487880753228	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGAACATTGACTTCAT	6950	False	NA	NA	False	NA	NA	NA	100768806	100909698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569_100881927_100899914_100900048_100905933_100906173_100908897
tx.23223	chr15	+	2198	6	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	3388	2	-2627	-2	3prime_fragment	FALSE	canonical	3	170	junction_2	16.6180624622728	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGAGTCTTTTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	101168114	101172674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
tx.23224	chr15	-	2888	8	FSM	ENSMUSG00000037185.10	ENSMUST00000230909.2	2811	8	-72	-5	-72	-3	multi-exon	FALSE	canonical	1	1	junction_1	2.05038572777248	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTGCTGTGCACTCGT	8215	False	NA	NA	False	NA	NA	NA	101262531	101246198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_101247921_101248049_101248106_101248876_101249098_101249554_101249681_101250057_101250223_101256527_101256624_101257360_101257422_101262090
tx.23225	chr15	+	4783	29	FSM	ENSMUSG00000037003.17	ENSMUST00000169627.9	4761	29	-24	2	-24	-1	multi-exon	TRUE	canonical	1	1	junction_1	4.23180378388532	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGAGTTGATACCTTCT	NA	False	NA	NA	False	NA	NA	NA	102011344	102024834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102011597_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
tx.23226	chr15	-	2553	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	44.0159328397116	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	6639	False	NA	NA	False	NA	NA	NA	102112321	102085433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102110878_102111010_102111571_102111696_102112130
tx.23227	chr15	-	2912	10	FSM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	41	0	41	0	multi-exon	FALSE	canonical	1	1	junction_9	31.3049516849971	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGTGGATCCCTCTA	NA	False	NA	NA	False	NA	NA	NA	102165911	102143372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102164904_102164975_102165674
tx.23228	chr15	+	7713	6	NNC	ENSMUSG00000001280.14	novel	7754	6	NA	NA	-78	-22	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	48.7138583977907	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATCATGTCTCTGGTG	NA	False	NA	NA	False	NA	NA	NA	102314689	102344817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_102314858_102316206_102316368_102316794_102318155_102334065_102334232_102338391_102338592_102339159
tx.23229	chr15	+	1231	5	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6549	-7	-243	4	3prime_fragment	FALSE	canonical	3	32	junction_1	46.916814683011	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAATGTGTTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	102360350	102363072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
tx.2323	chr11	+	5701	25	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	36	-1	intron_retention	FALSE	canonical	2	298	junction_19	51.9931719608984	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	NA	False	NA	NA	NA	3599226	3640476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
tx.23230	chr15	-	5193	13	ISM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	5131	-1186	5131	56	3prime_fragment	FALSE	canonical	3	51	junction_12	11.1080551353011	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGATCTCAAACTATGCA	NA	False	NA	NA	False	NA	NA	NA	102414004	102406024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524
tx.23231	chr15	-	7054	11	ISM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	31709	5	31181	-5	3prime_fragment	TRUE	canonical	3	31	junction_9	7.51598296964542	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGGTATGTTTGGTG	8643	False	NA	NA	False	NA	NA	NA	102502176	102437075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106
tx.23232	chr17	-	608	1	FSM	ENSMUSG00000068120.5	ENSMUST00000181584.2	441	1	-16	-151	-16	151	mono-exon	FALSE	NA	NA	NA	NA	NA	6	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	5866931	5866323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_5866300_5866900
tx.23233	chr15	-	1262	10	FSM	ENSMUSG00000022487.15	ENSMUST00000141364.8	700	10	-29	-533	1	424	multi-exon	FALSE	canonical	3	29	junction_9	37.8499310957182	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCTGAGATATCTTATG	8424	False	NA	NA	False	NA	NA	NA	103338835	103310407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603_103338685_103338782
tx.23234	chr15	+	3867	15	FSM	ENSMUSG00000022489.7	ENSMUST00000227955.2	3258	15	-609	0	-609	0	multi-exon	FALSE	canonical	2	3	junction_1	6.01740672328781	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTGTGGTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	103422737	103438479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_103423849_103428375_103428490_103429732_103429916_103430079_103430147_103430471_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
tx.23235	chr16	+	5923	3	FSM	ENSMUSG00000054939.7	ENSMUST00000041778.8	5897	3	-54	28	-54	-28	multi-exon	FALSE	canonical	2	5	junction_1	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATGGTATTGATTACT	NA	False	NA	NA	False	NA	NA	NA	3665077	3676716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_3666139_3667214_3667435_3672074
tx.23236	chr16	-	5923	4	FSM	ENSMUSG00000039738.17	ENSMUST00000145706.2	1945	4	-3994	16	-679	-16	multi-exon	FALSE	canonical	3	55	junction_1	1.69967317119759	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	3804062	3797012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448
tx.23237	chr16	-	10782	31	FSM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	12	26	12	-26	multi-exon	FALSE	canonical	3	32	junction_30	8.09416799649943	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGTAAAACTGCTTGGA	6024	False	NA	NA	False	NA	NA	NA	4031849	3899217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
tx.23238	chr16	-	4926	6	ISM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	4646	2	-2246	-2	3prime_fragment	TRUE	canonical	3	103	junction_5	12.3028451993838	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTAGTTATTGAGGA	1919	False	NA	NA	False	NA	NA	NA	4373072	4362526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798
tx.23239	chr16	+	2810	3	ISM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	16818	17	-97	-2	3prime_fragment	FALSE	canonical	3	99	junction_1	2.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCTGCACGTGCCA	NA	False	NA	NA	False	NA	NA	NA	4429394	4433804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_4429531_4429614_4429734_4431249
tx.2324	chr11	+	5458	27	FSM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	-266	-107	37	0	multi-exon	FALSE	canonical	2	110	junction_1	78.9355590669193	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	NA	False	NA	NA	NA	3599227	3640477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
tx.23240	chr16	-	1975	2	ISM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	3063	8	2553	2	3prime_fragment	FALSE	canonical	3	334	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCAGGCTCTGTAGTCT	2722	False	NA	NA	False	NA	NA	NA	4695116	4692649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_4693734_4694225
tx.23241	chr16	-	2054	15	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	1	4	combination_of_known_junctions	TRUE	canonical	2	6	junction_14	24.9154693362356	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8200	False	NA	NA	False	NA	NA	NA	4782060	4759295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4781983
tx.23242	chr16	+	433	4	FSM	ENSMUSG00000096215.9	ENSMUST00000185147.8	399	4	-34	0	2	0	multi-exon	FALSE	canonical	3	31	junction_1	9.41629792788369	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGTCTGGACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	4825181	4826173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4825283_4825607_4825753_4825835_4825919_4826069
tx.23243	chr16	+	3399	10	ISM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	-11	-289	-11	289	intron_retention	FALSE	canonical	3	136	junction_3	21.4740727964943	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGACTTGGGTGGATG	NA	False	NA	NA	False	NA	NA	NA	8288640	8308837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522
tx.23244	chr16	+	1312	10	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-7	9	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	49.6680337868021	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGAGATGCTGTCATT	NA	False	NA	NA	False	NA	NA	NA	8288644	8308069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_8288730_8291694_8291831_8295830_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
tx.23245	chr16	-	1608	7	FSM	ENSMUSG00000039179.14	ENSMUST00000043415.13	1803	7	191	4	149	-4	multi-exon	FALSE	canonical	2	3	junction_5	2.40947204913349	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTCTTTAGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	10213163	10175815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_10176300_10179121_10179277_10196760_10196984_10200653_10200798_10203926_10203998_10205018_10205103_10212716
tx.23246	chr16	+	2173	10	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-7	-7	intron_retention	FALSE	canonical	3	711	junction_2	67.1451348632384	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAACAAGGCTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	10229826	10242285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
tx.23247	chr16	+	2566	3	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTAAGTATGCTGAATTA	NA	False	NA	NA	False	NA	NA	NA	10286352	10292038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_+_10286474_10289437_10289520_10289675
tx.23248	chr16	-	2190	5	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	13	-216	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	169.812396485062	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCCTTGTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	10810972	10777354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_10778916_10781120_10781278_10784288_10784514_10793290_10793475_10810909
tx.23249	chr16	-	2141	2	ISM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	81002	-31	80975	31	3prime_fragment	FALSE	canonical	3	101	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGCCTGTGCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	11646285	11621553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_11623448_11646038
tx.2325	chr11	+	4630	2	FSM	ENSMUSG00000047205.13	ENSMUST00000055931.5	4632	2	2	0	2	0	multi-exon	FALSE	canonical	2	4	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTCTCATCCTCAAAT	5247	False	NA	NA	False	NA	NA	NA	3845241	3851296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3845518_3846942
tx.23250	chr16	+	2846	4	FSM	ENSMUSG00000022679.14	ENSMUST00000128757.8	3089	4	2	241	2	0	multi-exon	FALSE	canonical	2	10	junction_1	87.8179936004006	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	13721026	13767242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13721145_13762529_13762601_13764421_13764452_13764615
tx.23251	chr16	+	3259	4	NNC	ENSMUSG00000022679.14	novel	3087	4	NA	NA	-1	-97	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	81.939001702486	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGAGGCAGGCGGATTT	527	False	NA	NA	False	NA	NA	NA	13758564	13767386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_13758888_13762529_13762601_13764357_13764452_13764615
tx.23252	chr16	-	7712	27	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	10.9054570781256	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAATGAGTGCTTTTGT	9813	False	NA	NA	False	NA	NA	NA	13977134	13927036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959548_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
tx.23253	chr16	-	3322	7	ISM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	-3	35129	-3	-3335	5prime_fragment	FALSE	canonical	3	10	junction_3	5.22812904711937	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTCTTGTTTTTACTG	9813	False	NA	NA	False	NA	NA	NA	13977134	13962165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
tx.23254	chr16	-	1681	4	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	13	427	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	177.216126680264	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAAAAGTCTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	14135226	14116680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_14118074_14122317_14122452_14128910_14128996_14135157
tx.23255	chr16	+	3872	16	ISM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	81822	862	-17626	833	3prime_fragment	FALSE	canonical	3	110	junction_5	17.3674024156368	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	14261245	14292739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
tx.23256	chr16	+	4887	8	NNC	ENSMUSG00000026181.14	novel	4922	8	NA	NA	51	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	30.4818447135809	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGTGCCACTTGG	NA	False	NA	NA	False	NA	NA	NA	16714488	16745224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_16714614_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
tx.23257	chr16	-	6567	4	NNC	ENSMUSG00000022768.18	novel	4210	4	NA	NA	-504	-3	intron_retention	FALSE	canonical	1	1	junction_2	0.942809041582063	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGTGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	16965597	16956930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_16960067_16960194_16960744_16961874_16962013_16962853
tx.23258	chr16	-	2675	3	ISM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	84	-952	0	952	intron_retention	FALSE	canonical	3	101	junction_1	8.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCCACTGTGCTGTATT	7270	False	NA	NA	False	NA	NA	NA	17348916	17344893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_17346605_17346798_17346940_17348093
tx.2326	chr11	-	3060	2	FSM	ENSMUSG00000048807.3	ENSMUST00000051207.2	3059	2	0	-1	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGTCATTCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	3864664	3857020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3857985_3862568
tx.23260	chr16	-	3965	9	NIC	ENSMUSG00000003527.10	novel	2821	10	NA	NA	15	0	intron_retention	FALSE	canonical	3	145	junction_6	19.4032052764485	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTTTCTATCAATTGT	NA	False	NA	NA	False	NA	NA	NA	17729197	17718572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_17720188_17720681_17720798_17722865_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
tx.23261	chr16	+	1136	4	ISM	ENSMUSG00000003531.16	ENSMUST00000076757.12	894	5	1272	-3	-12	2	3prime_fragment	FALSE	canonical	3	350	junction_2	42.6796855137846	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGTGCTACCTAGGA	NA	False	NA	NA	False	NA	NA	NA	17884294	17889209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_17884721_17887287_17887389_17887954_17888096_17888741
tx.23262	chr16	+	1704	4	NNC	ENSMUSG00000071632.11	novel	361	3	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.4151691047439	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTCTCAATTAGGGT	NA	False	NA	NA	False	NA	NA	NA	18655330	18658909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_18655370_18655455_18655624_18657381_18658618_18658648
tx.23263	chr16	+	2286	14	NIC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	-14	12	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	39.0372299919421	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGATTCCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	18696005	18746773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_18696270_18713523_18713587_18714652_18714797_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
tx.23264	chr16	-	1316	2	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGCTCTTTCTACAA	NA	False	NA	NA	False	NA	NA	NA	20273145	20269993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_-_20271065_20272900
tx.23265	chr16	+	3225	18	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	-4	4	intron_retention	TRUE	canonical	3	19	junction_17	7.16005837868374	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCTTCCTTCAGT	NA	False	NA	NA	False	NA	NA	NA	20448590	20464669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463187_20463809
tx.23266	chr16	+	3557	18	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	5	2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	9.1079644982311	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCAGCTATTTCACTTT	NA	False	NA	NA	False	NA	NA	NA	20448605	20465228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_20448798_20449101_20449189_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
tx.23267	chr16	-	5089	3	NNC	ENSMUSG00000043391.11	novel	5164	2	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.5	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGCCGTTGGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21513413	21467791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_21472264_21472339_21472509_21512965
tx.23268	chr16	-	2820	2	FSM	ENSMUSG00000043391.11	ENSMUST00000231592.2	1135	2	-59	-1626	-23	1626	multi-exon	FALSE	canonical	3	24	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCTCAGTCTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	21513438	21493845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_21496193_21512965
tx.23269	chr16	-	1748	2	NIC	ENSMUSG00000043391.11	novel	1695	3	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTCTCCTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	21513440	21495471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_21496745_21512965
tx.2327	chr11	-	1877	9	ISM	ENSMUSG00000020432.13	ENSMUST00000109992.8	1945	10	205	0	205	0	3prime_fragment	FALSE	canonical	3	136	junction_3	10.0304224736548	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	3881584	3867191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392
tx.23270	chr16	+	720	4	FSM	ENSMUSG00000097290.10	ENSMUST00000211443.2	767	4	44	3	0	-3	multi-exon	FALSE	canonical	3	20	junction_2	60.8896999134957	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGTTGAAAGGTCC	NA	False	NA	NA	False	NA	NA	NA	21613111	21627787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_21613197_21614599_21614726_21625720_21625870_21627427
tx.23271	chr16	+	5325	13	FSM	ENSMUSG00000033306.16	ENSMUST00000038053.14	15459	13	-284	10418	-251	1130	multi-exon	FALSE	canonical	0	0	junction_3	3.30298686376774	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGCACAAACATTTGG	NA	False	NA	NA	False	NA	NA	NA	24212005	24800910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_24212355_24261530_24261641_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
tx.23272	chr16	+	2337	3	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTGTGGCTTTCTTGC	NA	False	NA	NA	False	NA	NA	NA	29921199	29927343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_+_29921497_29923369_29923503_29925436
tx.23273	chr16	-	7533	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.56533775269	9	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	30207655	30131240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
tx.23274	chr16	-	4590	9	NIC	ENSMUSG00000022537.19	novel	2405	10	NA	NA	-7	4	intron_retention	FALSE	canonical	3	16	junction_1	4.29934588047996	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCACGGTGGAGAACA	NA	False	NA	NA	False	NA	NA	NA	30369364	30332783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
tx.23275	chr16	+	3321	2	Genic_Genomic	ENSMUSG00000046546.4	novel	3075	1	NA	NA	-2472	-69	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCAGTTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	30416068	30421546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr16_+_30416173_30418329
tx.23276	chr16	-	3188	5	Fusion	ENSMUSG00000116617.2_ENSMUSG00000022548.15	novel	362	2	NA	NA	48	228	multi-exon	FALSE	canonical	2	3	junction_1	63.3423239232663	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGATGTTGCTATTATCA	8758	False	NA	NA	False	NA	NA	NA	31133364	31103013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr16_-_31105692_31119212_31119302_31122227_31122350_31129831_31129983_31133216
tx.23277	chr16	-	810	4	ISM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	3440	-37	194	3	3prime_fragment	FALSE	canonical	3	139	junction_3	14.7044966667419	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	NA	False	NA	NA	False	NA	NA	NA	31129972	31115936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831
tx.23278	chr16	-	5325	9	ISM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	13534	-1	-576	1	3prime_fragment	FALSE	canonical	3	47	junction_4	8.35071104756954	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTCTGTTGTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	31808571	31778488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757
tx.23279	chr16	-	2415	3	FSM	ENSMUSG00000052384.15	ENSMUST00000150250.2	360	3	-13	-2042	-13	0	multi-exon	FALSE	canonical	1	2	junction_2	3.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTGTGTAATGTCCT	NA	False	NA	NA	False	NA	NA	NA	31966949	31961602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_31963824_31966370_31966492_31966876
tx.2328	chr11	-	1949	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109989.10	1949	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	32.7813557369218	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	3882044	3867191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881975
tx.23280	chr16	+	3430	12	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	-33	-1136	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_8	62.5899683034862	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTCAAAGTTCTCTCT	8219	False	NA	NA	False	NA	NA	NA	32151041	32205577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32198578_32198651_32200079_32200474_32200583_32200664_32203591
tx.23281	chr16	+	3396	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	1	-840	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	210.012050188768	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCTGAGCTATAAAGA	NA	False	NA	NA	False	NA	NA	NA	32698151	32728405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32722788_32722916_32725901
tx.23282	chr16	-	3489	9	ISM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	6226	1869	-94	-1869	3prime_fragment	TRUE	canonical	3	14	junction_7	20.3838171106395	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGAAATGATGCTGAG	7398	False	NA	NA	False	NA	NA	NA	32870334	32834921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221
tx.23283	chr16	-	1890	11	FSM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	-214	3942	-186	-5	multi-exon	FALSE	canonical	2	4	junction_9	25.6242073048124	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTCTCACCTAGCATC	958	False	NA	NA	False	NA	NA	NA	32876774	32836994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873993_32874065_32876520
tx.23284	chr16	-	733	2	FSM	ENSMUSG00000097318.3	ENSMUST00000231849.2	665	2	-68	0	-16	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGAATTCTCTCCTTG	NA	False	NA	NA	False	NA	NA	NA	33201113	33200223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_33200729_33200885
tx.23285	chr16	-	753	2	FSM	ENSMUSG00000097318.3	ENSMUST00000180923.2	737	2	-13	-3	-13	2	multi-exon	FALSE	canonical	3	44	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAATTCTCTCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	33201110	33200221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_33200750_33200885
tx.23286	chr16	+	2388	12	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_7	20.1441089146912	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTTTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	33337699	33483773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
tx.23287	chr16	+	2514	3	ISM	ENSMUSG00000052133.17	ENSMUST00000133554.2	2928	6	158	18121	-59	-18121	5prime_fragment	FALSE	canonical	3	26	junction_2	3.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAGTAAGTACTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	35361672	35450389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_35361973_35442946_35443151_35448379
tx.23288	chr16	+	4857	21	NIC	ENSMUSG00000052133.17	novel	4350	22	NA	NA	7	-8	intron_retention	FALSE	canonical	3	22	junction_14	8.30421579681068	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAACTGTCTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	35361521	35484623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
tx.23289	chr16	-	6158	12	ISM	ENSMUSG00000034422.15	ENSMUST00000042665.9	7417	17	13029	-13	12867	13	3prime_fragment	FALSE	canonical	3	8	junction_10	2.69679944985297	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTTTTTTCTGCTG	NA	False	NA	NA	False	NA	NA	NA	35678885	35653230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_35655306_35656360_35656536_35659631_35659766_35661091_35661692_35661778_35662001_35664613_35664782_35665097_35665161_35665639_35665790_35666379_35666456_35673101_35673324_35673888_35674129_35676852
tx.2329	chr11	-	1918	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109993.9	2027	10	109	0	-6	0	multi-exon	FALSE	canonical	3	40	junction_9	35.4989132158461	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	3882050	3867191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3882012
tx.23290	chr16	-	4391	3	ISM	ENSMUSG00000049502.18	ENSMUST00000081933.14	5309	5	5557	4	5557	-4	3prime_fragment	FALSE	canonical	3	18	junction_1	1.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTGTGTGGTTTCCCTC	NA	False	NA	NA	False	NA	NA	NA	35753964	35746884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_35749739_35751742_35751961_35752645
tx.23291	chr16	-	6965	4	ISM	ENSMUSG00000051980.14	ENSMUST00000063597.14	4534	7	51319	-3109	50791	3109	3prime_fragment	FALSE	canonical	1	1	junction_3	4.54606056566195	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACTGAGTTTGTGGTC	3161	False	NA	NA	False	NA	NA	NA	36331177	36310948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_36316337_36317951_36318076_36320538_36320770_36329955
tx.23292	chr16	-	3687	3	NIC	ENSMUSG00000022838.15	novel	1030	6	NA	NA	-30	-11027	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	5.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8170	False	NA	NA	False	NA	NA	NA	36648653	36625213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_36628523_36630833_36630971_36648412
tx.23293	chr16	+	8672	31	FSM	ENSMUSG00000034206.16	ENSMUST00000182946.8	8628	31	-20	-24	-20	4	multi-exon	FALSE	canonical	2	7	junction_10	7.47655595103045	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTTTTAATTTTTAAAA	3728	False	NA	NA	False	NA	NA	NA	36832127	36915783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
tx.23294	chr16	-	1517	8	NNC	ENSMUSG00000022805.18	novel	3048	17	NA	NA	23157	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	14.2571142284282	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGTTGTTTGTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	38139017	38118115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140_38125363_38127077_38127225_38128443_38128516_38131353_38131471_38138841
tx.23295	chr16	+	2168	7	FSM	ENSMUSG00000022793.18	ENSMUST00000114712.8	2168	7	1	-1	1	1	multi-exon	FALSE	canonical	3	9	junction_1	7.60847480700888	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGTCTTGTTTTTTT	3915	False	NA	NA	False	NA	NA	NA	38562628	38589211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_38562798_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
tx.23296	chr16	+	3485	7	FSM	ENSMUSG00000022790.15	ENSMUST00000023478.8	3443	7	-42	0	-42	0	multi-exon	FALSE	canonical	0	0	junction_1	0.763762615825973	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGTCATTAATTGTCA	9675	False	NA	NA	False	NA	NA	NA	38722635	38847521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_38722922_38827495_38827660_38829146_38829355_38831578_38831735_38842727_38842851_38843591_38843743_38845124
tx.23297	chr16	-	6444	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-16	838	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	19.6897816138219	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCCTAGCAGATGA	NA	False	NA	NA	False	NA	NA	NA	43800170	43784557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43799982
tx.23298	chr16	-	6108	4	FSM	ENSMUSG00000036304.15	ENSMUST00000165648.2	1278	4	-717	-4113	24	0	multi-exon	FALSE	canonical	3	34	junction_2	9.10433352249844	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	43800130	43785395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270
tx.23299	chr16	-	1925	3	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	8	-5108	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	2	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTCTGCTGCTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	43800146	43794616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_43796109_43799270_43799540_43799982
tx.233	chr1	-	1867	14	NIC	ENSMUSG00000057363.13	novel	1921	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	53.1063463596267	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATTGACATCTGCTT	NA	False	NA	NA	False	NA	NA	NA	43866934	43788671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
tx.2330	chr11	+	2125	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	3	783	3	-783	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	1433	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTCTGTGTTCAGAAG	NA	False	NA	NA	False	NA	NA	NA	3913977	3929221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
tx.23300	chr16	+	1140	6	ISM	ENSMUSG00000068284.15	ENSMUST00000119746.8	12708	7	-11	14257	-11	276	5prime_fragment	FALSE	canonical	3	31	junction_1	10.2097992144802	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTTTTAGGTGTATCT	NA	False	NA	NA	False	NA	NA	NA	43993597	44033571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002
tx.23301	chr16	-	4437	19	NNC	ENSMUSG00000022687.13	novel	4451	19	NA	NA	16	5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	2.77332977207749	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGAGTGAGTCAGCGTT	NA	False	NA	NA	False	NA	NA	NA	44379244	44305406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_44306163_44307074_44307266_44307712_44307790_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
tx.23302	chr16	-	3267	5	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	47.3675785743793	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	44566711	44557132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_44559732_44560391_44560511_44562866_44562967_44565757_44565857_44566361
tx.23303	chr16	-	5441	17	ISM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	18399	-245	18255	245	3prime_fragment	TRUE	canonical	3	48	junction_15	7.3357003755606	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGGTGGGCTCCTTTC	7747	False	NA	NA	False	NA	NA	NA	45646342	45566360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121
tx.23304	chr16	-	5412	18	NNC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	15	13	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	15.495283354246	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTCTCCTCTCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	45664726	45566592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595382_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
tx.23305	chr16	+	1308	10	FSM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	13	3929	2	0	multi-exon	FALSE	canonical	3	19	junction_2	24.0960014099978	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	NA	False	NA	NA	NA	49676020	49731444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
tx.23306	chr16	-	7114	7	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	106109	-5302	106109	-13	3prime_fragment	FALSE	canonical	2	8	junction_5	3.685557397916	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAAGATATTATTCA	1041	False	NA	NA	False	NA	NA	NA	50045247	50012219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650
tx.23307	chr16	+	6530	20	NIC	ENSMUSG00000022637.12	novel	3866	19	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	17.7907193584424	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTGTATGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	51851957	52028410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_51852049_51852540_51852662_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
tx.23308	chr16	-	7939	11	NNC	ENSMUSG00000022604.19	novel	7911	11	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_8	12.1753850041795	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGATATCTGGTTATT	NA	False	NA	NA	False	NA	NA	NA	55755227	55720250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748064_55748243_55750828_55750972_55755115
tx.23309	chr16	+	2661	7	FSM	ENSMUSG00000052917.16	ENSMUST00000049128.11	1130	7	-45	-1486	-5	1486	multi-exon	FALSE	canonical	3	14	junction_6	9.3407708461347	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGATCCTTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	55895781	55948388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55946503
tx.2331	chr11	+	1588	3	NNC	ENSMUSG00000049721.15	novel	1749	3	NA	NA	2570	-2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	4	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTTTTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	3942502	3949324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_3942549_3946908_3947052_3947925
tx.23310	chr16	-	1793	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	35	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	56537673	56510694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
tx.23311	chr16	+	2701	9	NIC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	3	634	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	90.0583144412552	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGTTTCAGTTATAAAGT	NA	False	NA	NA	False	NA	NA	NA	59292140	59313458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59311567_59311658_59312103
tx.23312	chr16	-	6977	19	FSM	ENSMUSG00000022723.17	ENSMUST00000044604.16	6544	19	-1742	1309	-1742	4	multi-exon	FALSE	canonical	1	1	junction_14	2.56519919569227	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGGGATGCCTAATAAT	NA	False	NA	NA	False	NA	NA	NA	59377857	59312446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_59314049_59315029_59315190_59315972_59316132_59323487_59323612_59326543_59326684_59342446_59342577_59345223_59345334_59349585_59349619_59350466_59350594_59350693_59350840_59357060_59357188_59360167_59360302_59362422_59362459_59363538_59363654_59364391_59364529_59370764_59370913_59372534_59372651_59372892_59372938_59374469
tx.23313	chr16	-	6227	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-111	1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	59.4110551108778	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCAAGTGTTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	64672126	64600712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_64603640_64604869_64607166_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
tx.23314	chr16	+	2815	5	ISM	ENSMUSG00000022883.12	ENSMUST00000023600.8	7563	29	360982	0	17710	0	3prime_fragment	FALSE	canonical	3	62	junction_4	4.74341649025257	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	NA	NA	NA	72821018	72842983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
tx.23315	chr16	-	7701	4	NIC	ENSMUSG00000048490.15	novel	7868	4	NA	NA	-45	-332	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	8.73053390247253	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAAATGGCTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	76169982	76084619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_76091904_76127633_76127753_76149359_76149435_76169759
tx.23316	chr16	-	7582	3	FSM	ENSMUSG00000048490.15	ENSMUST00000231304.2	540	3	-52	-6990	-47	-337	multi-exon	FALSE	canonical	2	16	junction_1	15.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTGAAATGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	76169984	76084624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_76091904_76149359_76149438_76169759
tx.23317	chr16	+	4718	24	NNC	ENSMUSG00000022867.12	novel	4776	24	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	17.8722625701443	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTGTGTCTATTGC	NA	False	NA	NA	False	NA	NA	NA	76810608	76913665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910660_76910745_76911771_76911968_76912277
tx.23318	chr16	-	6274	4	ISM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-12	1	-12	-1	intron_retention	FALSE	canonical	3	299	junction_1	8.65383665716478	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGAGCCTCGGTTGAT	3231	False	NA	NA	False	NA	NA	NA	78373557	78337226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808
tx.23319	chr16	-	7489	29	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.0424938564459	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCCATTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	87229441	87173538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_87175896_87176563_87176732_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
tx.2332	chr11	+	4187	12	FSM	ENSMUSG00000019368.14	ENSMUST00000019512.8	2956	12	8	-1239	8	1239	multi-exon	FALSE	canonical	3	10	junction_7	3.13603423830188	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	3981790	3999263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
tx.23320	chr16	+	2194	13	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.6494213781555	4	1	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTATTAGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	87251853	87280403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_87251991_87255528_87255631_87258852_87258906_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
tx.23321	chr16	+	5895	5	FSM	ENSMUSG00000025612.6	ENSMUST00000026703.6	5867	5	-27	-1	-27	1	multi-exon	FALSE	canonical	1	4	junction_3	14.497844667398	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGTACATTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	87495805	87530235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289_87519497_87526324
tx.23322	chr16	+	5193	3	ISM	ENSMUSG00000025612.6	ENSMUST00000026703.6	5867	5	20130	0	20071	0	3prime_fragment	FALSE	canonical	1	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGTTGTACATTTCTGT	NA	False	NA	NA	False	NA	NA	NA	87515962	87530234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_87517039_87519289_87519497_87526324
tx.23323	chr16	-	5479	24	ISM	ENSMUSG00000002489.17	ENSMUST00000002588.11	7289	28	76047	-1	-26963	0	3prime_fragment	FALSE	canonical	3	48	junction_20	8.90954332122678	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	89681668	89583998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565
tx.23324	chr16	-	3381	2	FSM	ENSMUSG00000039763.11	ENSMUST00000049244.10	3368	2	-13	0	-13	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGGTCCATTGATCT	9236	False	NA	NA	False	NA	NA	NA	91415900	91411141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_91414268_91415645
tx.23325	chr16	-	3258	10	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	-10	0	intron_retention	FALSE	canonical	3	56	junction_9	27.1051906103737	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	NA	False	NA	NA	NA	93400713	93380344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
tx.23326	chr16	-	1908	12	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	40.1213036710482	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	NA	False	NA	NA	NA	93400797	93380344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400024_93400085_93400453
tx.23327	chr16	-	3887	4	ISM	ENSMUSG00000040820.17	ENSMUST00000226776.2	3388	6	-29	35387	-13	-35387	5prime_fragment	FALSE	canonical	3	38	junction_3	0.816496580927726	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTCTGCTCAATTTCG	NA	False	NA	NA	False	NA	NA	NA	94091158	94065814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_94069167_94069394_94069558_94088650_94088786_94090921
tx.23328	chr16	-	3603	3	ISM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	4	5	4	0	intron_retention	FALSE	canonical	3	435	junction_1	11.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	NA	NA	NA	94171567	94165310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_94165647_94166213_94166333_94168419
tx.23329	chr16	+	3810	11	FSM	ENSMUSG00000040785.20	ENSMUST00000119131.3	3781	11	-26	-3	5	3	multi-exon	FALSE	canonical	3	23	junction_10	14.2197046382828	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTTGTAGAACTCAT	NA	False	NA	NA	False	NA	NA	NA	94171630	94198057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
tx.2333	chr11	-	1386	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	25	0	25	0	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	4045420	4041479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
tx.23330	chr16	-	5930	4	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	930	582	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	38.9101529166874	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACAGTCTCTTGTATA	NA	False	NA	NA	False	NA	NA	NA	95809283	95799888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036
tx.23331	chr16	-	1029	7	NNC	ENSMUSG00000022938.9	novel	806	8	NA	NA	11	225	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	15.7347810068438	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTCTGGGGAATGA	NA	False	NA	NA	False	NA	NA	NA	97313719	97271939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97313629
tx.23332	chr16	-	6175	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	8.7757183474732	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCCTCTGCTCTCC	6491	False	NA	NA	False	NA	NA	NA	97653042	97592719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
tx.23333	chr16	-	6096	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	8.90996765591714	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGCTGGCCCTCTGCTC	6480	False	NA	NA	False	NA	NA	NA	97653053	97592722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618150_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
tx.23334	chr16	-	6553	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	25.6796375944492	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGGTTCCGAGTGCCG	NA	False	NA	NA	False	NA	NA	NA	97723839	97656411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687405_97691213_97691319_97693389_97693510_97713805_97713905_97723254
tx.23335	chr17	+	4483	6	ISM	ENSMUSG00000069729.15	ENSMUST00000092723.11	7150	19	332727	-1021	287088	1021	3prime_fragment	FALSE	canonical	3	55	junction_4	10.3266645147405	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTGTTCTTGAATGC	NA	False	NA	NA	False	NA	NA	NA	5377940	5394801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
tx.23336	chr17	+	5311	5	ISM	ENSMUSG00000069729.15	ENSMUST00000092723.11	7150	19	336549	-1006	290910	1006	3prime_fragment	FALSE	canonical	3	55	junction_3	9.90896059130321	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTACGCACTGTGATG	NA	False	NA	NA	False	NA	NA	NA	5381762	5394786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
tx.23337	chr17	-	1341	2	ISM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	6674	-615	6674	615	3prime_fragment	FALSE	canonical	3	675	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTTACATTTCAATTA	8663	False	NA	NA	False	NA	NA	NA	5483844	5460529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_5461743_5483716
tx.23338	chr17	-	8515	5	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	24607	-1625	-3746	1625	intron_retention	FALSE	canonical	3	72	junction_2	6.29980158417708	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	1105	False	NA	NA	False	NA	NA	NA	6105409	6090845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999
tx.23339	chr17	-	4306	6	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	27945	-1624	-408	1624	3prime_fragment	FALSE	canonical	3	72	junction_2	5.65685424949238	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTGTTCAATTCTT	4443	False	NA	NA	False	NA	NA	NA	6102071	6090846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964
tx.2334	chr11	-	2597	11	NIC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	5.85149553533112	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAGCAGAATTCATTG	NA	False	NA	NA	False	NA	NA	NA	4073419	4047043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4073165
tx.23341	chr17	+	1881	8	NIC	ENSMUSG00000094724.9	novel	1783	9	NA	NA	-58	-4	intron_retention	FALSE	canonical	3	652	junction_3	39.1329497367888	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTGGCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	7246247	7265585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_7246498_7248506_7248568_7251537_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
tx.23342	chr17	+	5116	10	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	12	37108	0	3568	5prime_fragment	FALSE	canonical	3	167	junction_7	9.98888270918113	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTATTTTGAGATT	NA	False	NA	NA	False	NA	NA	NA	7437525	7533606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526
tx.23343	chr17	+	2137	3	NNC	ENSMUSG00000023826.17	novel	3202	12	NA	NA	14771	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	0.5	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCGTGTTTGTACCTAT	NA	False	NA	NA	False	NA	NA	NA	12263573	12282253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_12263767_12269512_12269631_12280427
tx.23344	chr17	+	1100	4	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-60	-7	combination_of_known_splicesites	FALSE	canonical	3	346	junction_2	1332.66950141436	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTCTATTTAGTGGACA	NA	False	NA	NA	False	NA	NA	NA	13226822	13234496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_13226956_13227070_13227274_13232319_13232500_13233912
tx.23345	chr17	+	2518	3	Fusion	ENSMUSG00000060417.7_ENSMUSG00000090211.4	novel	2463	3	NA	NA	-15	758	multi-exon	FALSE	canonical	0	0	junction_1	6	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCGGAGGTTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	13721200	13739289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_+_13721317_13722461_13722565_13736990
tx.23346	chr17	+	2509	18	FSM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	400	-374	-7	1	multi-exon	FALSE	canonical	0	0	junction_7	62.8043041744542	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAACTCTATGTTGCC	NA	False	NA	NA	False	NA	NA	NA	15261869	15284486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
tx.23347	chr17	-	4846	3	ISM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	-18	4	-18	-4	intron_retention	FALSE	canonical	3	869	junction_2	51.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCCTCAGTACCTCAT	NA	False	NA	NA	False	NA	NA	NA	15747581	15741840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_15742056_15742177_15742292_15743064
tx.23348	chr17	+	2091	5	NIC	ENSMUSG00000023882.16	novel	2832	5	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	8.22724133595217	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	21643499	21655416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_21643580_21647593_21647634_21647998_21648091_21650456_21650584_21653664
tx.23349	chr17	+	5954	6	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	0	1616	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	8.84533775499839	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTTTGTGCATTTAG	NA	False	NA	NA	False	NA	NA	NA	21869544	21885498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_21869695_21871186_21871266_21875011_21875249_21876434_21876528_21877828_21877956_21880230
tx.2335	chr11	-	2600	12	FSM	ENSMUSG00000003585.14	ENSMUST00000003681.8	2631	12	27	4	27	-4	multi-exon	TRUE	canonical	3	7	junction_11	8.90816321700644	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAGCAGAATTCATTGC	NA	False	NA	NA	False	NA	NA	NA	4068804	4047042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624
tx.23350	chr17	+	4227	5	NNC	ENSMUSG00000053347.16	novel	1338	6	NA	NA	-29	24244	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	9.09326673973661	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCTGGTTGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	22181503	22237591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_22181801_22207011_22207083_22209759_22209887_22225286_22225364_22233936
tx.23351	chr17	-	6091	4	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	20	-5	intron_retention	FALSE	canonical	3	53	junction_1	17.9691092959247	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22580361	22556974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22562675_22577803_22577897_22578420_22578506_22580148
tx.23352	chr17	+	4350	4	FSM	ENSMUSG00000044501.18	ENSMUST00000121315.2	2860	4	-60	-1430	7	1430	multi-exon	FALSE	canonical	3	6	junction_1	15.7973274814304	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22580442	22597692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_22580689_22591016_22591070_22592623_22592751_22593768
tx.23353	chr17	+	5037	2	ISM	ENSMUSG00000044501.18	ENSMUST00000121315.2	2860	4	11137	-1432	11137	1432	3prime_fragment	FALSE	canonical	3	40	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22591639	22597694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_22592751_22593768
tx.23354	chr17	+	1541	2	FSM	ENSMUSG00000023906.4	ENSMUST00000233364.2	1078	2	19	-482	19	2	multi-exon	FALSE	canonical	3	11	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTCTGATGTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	23898651	23901418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_23898796_23900021
tx.23355	chr17	-	684	3	FSM	ENSMUSG00000023911.13	ENSMUST00000024704.10	694	3	9	1	9	-1	multi-exon	FALSE	canonical	3	11	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTAGTTTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	24005046	23995890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23996074_23998601_23999031_24004974
tx.23356	chr17	+	5483	5	NNC	ENSMUSG00000039218.18	novel	8564	14	NA	NA	-2073	2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	68.3556874005375	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGTCTGTAGTCTTTA	879	False	NA	NA	False	NA	NA	NA	24036208	24043712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_24040665_24041386_24041675_24042764_24042879_24042992_24043095_24043189
tx.23357	chr17	+	1231	6	FSM	ENSMUSG00000050762.6	ENSMUST00000059482.6	1253	6	17	5	17	-5	multi-exon	FALSE	canonical	2	6	junction_4	4.88262224629348	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	4548	False	NA	NA	False	NA	NA	NA	24257134	24264923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24257336_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
tx.23358	chr17	-	7122	10	NNC	ENSMUSG00000036473.17	novel	7265	10	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.4219616172109	5	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTTTGTACATCTGTGT	NA	False	NA	NA	False	NA	NA	NA	24424539	24394407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_24399033_24399158_24399651_24400198_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
tx.23359	chr17	-	6156	4	NNC	ENSMUSG00000036473.17	novel	4216	7	NA	NA	-1389	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	11.3431330181157	3	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTATCTTTGTACATCT	NA	False	NA	NA	False	NA	NA	NA	24401518	24394411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_24399033_24399158_24400370_24400729_24400959_24401423
tx.2336	chr11	+	1905	9	FSM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	-26	-5	-26	5	multi-exon	FALSE	canonical	3	21	junction_6	6.41165930161608	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTAAGACATAAATCTG	7824	False	NA	NA	False	NA	NA	NA	4085175	4091177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4089859_4089934_4090079_4090297_4090401_4090486
tx.23360	chr17	-	7709	9	NNC	ENSMUSG00000036473.17	novel	4081	9	NA	NA	-41	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	9.33742469849155	6	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTGTACATCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	24424577	24394406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_24399033_24399158_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
tx.23361	chr17	-	3488	8	NIC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	60	junction_7	10.7304639761222	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGCCGATTGCTTT	9615	False	NA	NA	False	NA	NA	NA	24698024	24692525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697453_24697985
tx.23362	chr17	+	903	5	NIC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	98.3142283700584	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	913	False	NA	NA	False	NA	NA	NA	24851660	24857811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_24851829_24852900_24853140_24854561_24854722_24857397_24857504_24857581
tx.23363	chr17	+	3327	4	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	5	-1	intron_retention	FALSE	canonical	3	27	junction_1	106.436209377574	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCTTGGCCCGTTGGC	913	False	NA	NA	False	NA	NA	NA	24851660	24857809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_24852833_24852900_24854722_24857397_24857504_24857581
tx.23364	chr17	+	3398	3	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	5	1	intron_retention	FALSE	canonical	3	232	junction_1	18.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	913	False	NA	NA	False	NA	NA	NA	24851660	24857812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_24854722_24857397_24857504_24857581
tx.23365	chr17	-	3127	4	FSM	ENSMUSG00000007021.6	ENSMUST00000007236.5	1965	4	-1161	-1	-1161	1	multi-exon	FALSE	canonical	3	8	junction_2	5.18544972870135	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCCCCTGGACTTAT	NA	False	NA	NA	False	NA	NA	NA	24910090	24904064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24905415_24905492_24905636_24906476_24906715_24908694
tx.23366	chr17	-	1207	4	NNC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	273.584843634779	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGGTTTCTGTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	24915132	24912162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_24912587_24913158_24913417_24914227_24914425_24914804
tx.23367	chr17	-	1623	3	NNC	ENSMUSG00000040888.11	novel	682	3	NA	NA	-38	1	intron_retention	FALSE	canonical	0	0	junction_1	311	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGGTTTCTGTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	24915168	24912162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_24912587_24913158_24913417_24914227
tx.23368	chr17	+	2383	9	FSM	ENSMUSG00000019320.15	ENSMUST00000019464.8	2238	9	-147	2	-147	2	multi-exon	FALSE	canonical	1	4	junction_2	2.89125837655509	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCACTGTGCACTGAGGG	NA	False	NA	NA	False	NA	NA	NA	24915060	24919501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24916099_24917193_24917383_24917491_24917573_24917759_24917836_24917918_24918097_24918242_24918425_24918517_24918632_24918871_24918990_24919094
tx.23369	chr17	-	3654	2	FSM	ENSMUSG00000024170.16	ENSMUST00000143390.2	425	2	-2979	-250	-762	3	multi-exon	FALSE	canonical	3	105	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGCTTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	25323379	25318547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25319095_25320272
tx.2337	chr11	+	1824	7	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	-26	5	intron_retention	FALSE	canonical	3	4	junction_4	11.8836956466506	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTAAGACATAAATCTG	7824	False	NA	NA	False	NA	NA	NA	4085175	4091177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4089738_4090079_4090297_4090401_4090486
tx.23370	chr17	-	5999	41	FSM	ENSMUSG00000073434.13	ENSMUST00000079461.15	5991	41	-9	1	-9	0	multi-exon	TRUE	canonical	2	3	junction_38	18.7159691173073	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTTTATTGTCCCA	9825	False	NA	NA	False	NA	NA	NA	26080458	26063745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079628_26079792_26079880_26080058_26080158
tx.23371	chr17	-	4608	11	NIC	ENSMUSG00000037326.11	novel	4555	12	NA	NA	-40	0	intron_retention	TRUE	canonical	0	0	junction_4	29.3189358606345	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1772	False	NA	NA	False	NA	NA	NA	26204720	26177340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_26178708_26178780_26178960_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
tx.23372	chr17	+	2804	10	NIC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	13	-1	intron_retention	FALSE	canonical	2	25	junction_1	113.762368748237	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	NA	False	NA	NA	NA	26357674	26414784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_26358016_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
tx.23373	chr17	-	1003	6	FSM	ENSMUSG00000073433.12	ENSMUST00000121959.3	1029	6	31	-5	12	1	multi-exon	FALSE	canonical	3	7	junction_2	34.8906864363543	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGCTGCTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	26420312	26418155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26418504_26418586_26418651_26418743_26418803_26418988_26419073_26419164_26419345_26420044
tx.23374	chr17	+	1614	4	NIC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	7282	-294	intron_retention	FALSE	canonical	3	266	junction_1	49.9488627386939	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTTAATCTTAGAT	NA	False	NA	NA	False	NA	NA	NA	27143428	27151263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_27144707_27144799_27144874_27145193_27145270_27151077
tx.23376	chr17	-	2242	3	ISM	ENSMUSG00000024208.17	ENSMUST00000145148.2	649	5	5743	-2	5743	2	3prime_fragment	TRUE	canonical	3	2713	junction_1	176.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGTTTGGAACTCATT	7983	False	NA	NA	False	NA	NA	NA	27346854	27341639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_27341815_27344120_27344191_27344857
tx.23377	chr17	+	4663	3	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	9.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTGTTCCATCTTCC	NA	False	NA	NA	False	NA	NA	NA	27449574	27458368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_+_27449685_27453543_27457979_27458250
tx.23378	chr17	-	3697	3	NIC	ENSMUSG00000117916.2	novel	2579	3	NA	NA	-99	1285	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	3.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTGGTCACTGTTT	6150	False	NA	NA	False	NA	NA	NA	27461732	27452763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_27456112_27458358_27458523_27461547
tx.23379	chr17	-	2135	2	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCATCCCTGCAGAAAG	7524	False	NA	NA	False	NA	NA	NA	27548984	27543023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_-_27544999_27548824
tx.2338	chr11	+	2990	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	13	1917	8	1205	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	1405	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCATGGAAGCAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	4110362	4130624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
tx.23380	chr17	+	4114	10	FSM	ENSMUSG00000040276.16	ENSMUST00000231669.2	4209	10	46	49	0	-49	multi-exon	FALSE	canonical	1	1	junction_1	19.4193488848393	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATCAGTTGTGACCGTA	NA	False	NA	NA	False	NA	NA	NA	27904200	27930036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27904400_27920799_27920916_27921673_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
tx.23381	chr17	+	1905	7	ISM	ENSMUSG00000024219.17	ENSMUST00000088027.7	6838	24	-4	74997	-4	10771	5prime_fragment	FALSE	canonical	3	39	junction_4	6.71854812358212	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAGTAAAACAACATGCA	4246	False	NA	NA	False	NA	NA	NA	28128286	28206576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718
tx.23382	chr17	+	3663	22	NIC	ENSMUSG00000038677.15	novel	3822	23	NA	NA	-176	-363	combination_of_known_junctions	TRUE	canonical	2	7	junction_16	10.2313377477651	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTATAGCATGGTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	28360938	28390553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
tx.23383	chr17	+	231	2	ISM	ENSMUSG00000002250.17	ENSMUST00000123020.9	1433	4	-46	59286	18	-36068	5prime_fragment	FALSE	canonical	3	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCCGCTTCGCAGACT	NA	False	NA	NA	False	NA	NA	NA	28451691	28456069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_28451839_28455985
tx.23384	chr17	-	2565	12	NNC	ENSMUSG00000002249.22	novel	2585	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.83717936987768	7	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCCATATGCAA	NA	False	NA	NA	False	NA	NA	NA	28569774	28550687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28555475_28555548_28559127_28559193_28560322_28560575_28569582
tx.23385	chr17	+	4377	6	NIC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	347	junction_1	81.5180961504867	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	NA	NA	NA	29171460	29188523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29183133_29183947_29184059_29185625
tx.23386	chr17	+	1195	8	FSM	ENSMUSG00000052712.18	ENSMUST00000235114.2	1073	8	-119	-3	1	0	multi-exon	FALSE	canonical	3	42	junction_3	114.986245850075	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	349	False	NA	NA	False	NA	NA	NA	29487799	29520499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
tx.23387	chr17	+	1236	9	NIC	ENSMUSG00000052712.18	novel	2812	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	115.980332384418	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	471	False	NA	NA	False	NA	NA	NA	29487921	29520499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_29487977_29496830_29496922_29501033_29501242_29501702_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
tx.23388	chr17	+	1196	8	FSM	ENSMUSG00000052712.18	ENSMUST00000234711.2	13859	8	123	12540	0	0	multi-exon	FALSE	canonical	3	31	junction_1	113.402479906656	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	471	False	NA	NA	False	NA	NA	NA	29487921	29520499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29487977_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
tx.23389	chr17	+	2674	5	FSM	ENSMUSG00000044477.13	ENSMUST00000226421.3	3489	5	9	806	6	0	multi-exon	FALSE	canonical	2	11	junction_1	47.3623004086584	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATTGTCTGTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	30224030	30428996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_30224283_30354296_30354480_30372276_30372343_30411536_30411705_30426991
tx.2339	chr11	+	1913	10	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	13757	1917	-3441	1205	3prime_fragment	FALSE	canonical	3	694	junction_5	88.7080104111862	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCATGGAAGCAGTTTGT	2613	False	NA	NA	False	NA	NA	NA	4124106	4130624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
tx.23390	chr17	+	2637	5	FSM	ENSMUSG00000044477.13	ENSMUST00000057897.10	2640	5	2	1	2	-1	multi-exon	FALSE	canonical	2	8	junction_3	41.3037528561268	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGATTGTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	30224039	30428993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30411536_30411705_30426991
tx.23391	chr17	-	4617	12	FSM	ENSMUSG00000062202.15	ENSMUST00000079924.8	2007	12	-88	-2522	2	7	multi-exon	FALSE	canonical	3	6	junction_1	31.2708773237183	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGTTTCATTCCTAGAA	NA	False	NA	NA	False	NA	NA	NA	30795231	30436507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_30439119_30439318_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
tx.23392	chr17	+	5726	13	FSM	ENSMUSG00000024027.9	ENSMUST00000114574.3	5811	13	0	85	0	-85	multi-exon	TRUE	canonical	0	0	junction_2	2.40947204913349	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAATCTAAAAGAA	5253	False	NA	NA	False	NA	NA	NA	31120790	31159680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31120929_31127094_31127192_31128197_31128306_31137853_31137973_31138329_31138437_31143474_31143629_31144491_31144652_31148910_31148972_31149500_31149571_31149691_31149781_31150122_31150262_31151586_31151629_31155238
tx.23394	chr17	-	1064	8	FSM	ENSMUSG00000024033.11	ENSMUST00000235144.2	1026	8	-32	-6	13	0	multi-exon	FALSE	canonical	3	5	junction_7	21.3101489666213	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCTGATGTCGCTTC	NA	False	NA	NA	False	NA	NA	NA	31496344	31473992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31496175
tx.23395	chr17	+	5112	3	ISM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	6781	467	6750	-467	3prime_fragment	FALSE	canonical	3	72	junction_1	5.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCAACGAAGCCTGTG	NA	False	NA	NA	False	NA	NA	NA	33191568	33197740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_33195015_33195200_33195259_33196132
tx.23396	chr17	+	7802	2	NIC	ENSMUSG00000096910.3	novel	5788	4	NA	NA	-4276	-593	intron_retention	FALSE	canonical	3	48	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTACGCATGTTTATAAT	NA	False	NA	NA	False	NA	NA	NA	33517058	33525622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_33519977_33520738
tx.23397	chr17	+	1206	5	FSM	ENSMUSG00000024299.18	ENSMUST00000174170.3	1798	5	-102	694	-84	0	multi-exon	FALSE	canonical	3	25	junction_4	5.3851648071345	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACGAGTGATGGGCAGAA	NA	False	NA	NA	False	NA	NA	NA	33743093	33750929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_33743233_33747257_33747445_33747653_33748001_33749106_33749264_33750553
tx.23398	chr17	-	1693	5	NNC	ENSMUSG00000067203.9	novel	1567	5	NA	NA	9	20	intron_retention	FALSE	canonical	0	0	junction_1	10.3047319227625	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCACTATGCTGTGT	3653	False	NA	NA	False	NA	NA	NA	34197792	34193612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_34194054_34194455_34194588_34194714_34194990_34196744_34197498_34197700
tx.23399	chr17	-	2053	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_2	9.32523458149981	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34243626	34240057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_34240458_34240656_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
tx.234	chr1	-	2063	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	10	-16	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	52.099394802392	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGGTTTTGAGCTACAA	NA	False	NA	NA	False	NA	NA	NA	43866950	43788687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
tx.2340	chr11	+	1922	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	2	-3	2	0	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	442	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	1584	False	NA	NA	False	NA	NA	NA	4136823	4165505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
tx.23400	chr17	+	5800	4	NIC	ENSMUSG00000039656.18	novel	2577	10	NA	NA	-24	0	intron_retention	FALSE	canonical	3	122	junction_1	53.5433365498349	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	False	NA	NA	False	NA	NA	NA	34251145	34257373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_34255732_34255846_34255939_34256140_34256247_34256357
tx.23401	chr17	+	1079	5	ISM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	1481	7	1359	2	3prime_fragment	FALSE	canonical	3	50	junction_2	5.35607132140714	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTGGCTTTGATA	NA	False	NA	NA	False	NA	NA	NA	34483663	34488386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
tx.23402	chr17	+	1162	5	FSM	ENSMUSG00000060586.12	ENSMUST00000235501.2	782	5	-134	-246	-134	-1	multi-exon	FALSE	canonical	3	177	junction_1	12.5896783120142	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCTTCATAGAGTTTC	NA	False	NA	NA	False	NA	NA	NA	34528414	34535172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
tx.23403	chr17	-	3002	3	ISM	ENSMUSG00000061207.12	ENSMUST00000162055.8	587	5	5223	-196	-821	0	3prime_fragment	FALSE	canonical	3	81	junction_1	6.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	9064	False	NA	NA	False	NA	NA	NA	35046248	35042968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_35043301_35043489_35043638_35043726
tx.23404	chr17	-	2583	18	FSM	ENSMUSG00000024371.15	ENSMUST00000025230.15	2641	18	56	2	-18	-1	multi-exon	TRUE	canonical	1	4	junction_13	3.65842630716852	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCTGTCTTATGTC	NA	False	NA	NA	False	NA	NA	NA	35101020	35081582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35082008_35082154_35082205_35082320_35082451_35082599_35082692_35082838_35082916_35083020_35083187_35083283_35083402_35083487_35083583_35083704_35083846_35085493_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309_35095487_35098857_35099044_35100547_35100773_35100925
tx.23405	chr17	-	621	5	FSM	ENSMUSG00000036185.10	ENSMUST00000174037.8	665	5	26	18	26	0	multi-exon	FALSE	canonical	3	19	junction_4	14.8218588577816	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	35246864	35244952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419_35246565_35246772
tx.23406	chr17	+	1256	7	NIC	ENSMUSG00000007039.13	novel	682	4	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	154.377693408802	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGTGACTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	35278790	35281069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35278941_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
tx.23407	chr17	+	3318	19	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-11	0	intron_retention	FALSE	canonical	3	106	junction_5	21.8206069780125	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	NA	False	NA	NA	NA	35308227	35321963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
tx.23408	chr17	-	1769	4	ISM	ENSMUSG00000024387.14	ENSMUST00000174779.8	632	5	45	-3	45	1	3prime_fragment	TRUE	canonical	3	826	junction_1	48.6095555306659	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTCCTACTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	35338706	35335170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434
tx.23409	chr17	-	2284	5	FSM	ENSMUSG00000024387.14	ENSMUST00000174779.8	632	5	-1652	0	2	0	multi-exon	FALSE	canonical	3	826	junction_1	44.5028089001133	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	NA	False	NA	NA	NA	35340403	35335173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729
tx.2341	chr11	+	1582	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	-8	0	-8	0	multi-exon	FALSE	canonical	3	115	junction_3	11.4229757506527	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	7110	False	NA	NA	False	NA	NA	NA	4168216	4172409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
tx.23410	chr17	-	5938	4	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATTCTGCAGATGTCTG	NA	False	NA	NA	False	NA	NA	NA	35568970	35556587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_-_35561772_35561946_35562418_35564120_35564221_35568787
tx.23411	chr17	+	2305	2	ISM	ENSMUSG00000091705.9	ENSMUST00000074806.12	1262	7	850	-968	850	0	intron_retention	TRUE	canonical	3	9	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	5730	False	NA	NA	False	NA	NA	NA	35562067	35565738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_35562365_35563730
tx.23412	chr17	+	1634	5	NIC	ENSMUSG00000091705.9	novel	1262	7	NA	NA	859	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	2.23606797749979	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTTGTTTCTGTTT	5739	False	NA	NA	False	NA	NA	NA	35562076	35565739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564819
tx.23413	chr17	-	1965	3	ISM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	-20	0	-20	0	intron_retention	FALSE	canonical	3	75	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9313	False	NA	NA	False	NA	NA	NA	35827741	35823630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_35824082_35825370_35825918_35826774
tx.23414	chr17	-	2112	4	ISM	ENSMUSG00000038838.16	ENSMUST00000164295.8	722	5	-338	-239	-338	2	intron_retention	FALSE	canonical	3	233	junction_3	8.2192186706253	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCAAGTGTGAGCCTTT	9626	False	NA	NA	False	NA	NA	NA	35969646	35967279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098
tx.23415	chr17	-	2498	11	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8954	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	9.22821759604746	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6730	False	NA	NA	False	NA	NA	NA	35999909	35992458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_35999853
tx.23416	chr17	-	2737	11	ISM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	10648	1	8009	-1	3prime_fragment	FALSE	canonical	3	13	junction_10	9.58331884056875	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGGTGTATTTCCTG	5785	False	NA	NA	False	NA	NA	NA	36000854	35992459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558
tx.23417	chr17	-	430	4	FSM	ENSMUSG00000024446.14	ENSMUST00000077535.5	437	4	-17	24	-17	-2	multi-exon	FALSE	canonical	3	63	junction_3	333.755399456948	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTGTGGTATCTCAA	NA	False	NA	NA	False	NA	NA	NA	36568765	36566560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568674
tx.23418	chr17	-	4567	2	ISM	ENSMUSG00000083534.2	ENSMUST00000119193.2	1034	5	-643	-1844	-643	1844	intron_retention	FALSE	canonical	3	153	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	NA	False	NA	NA	NA	37282931	37278242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_37280210_37280331
tx.23419	chr17	-	3075	8	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	124	1842	intron_retention	FALSE	canonical	3	13	junction_5	79.6415438712992	15	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGGTATTGATTG	NA	False	NA	NA	False	NA	NA	NA	37300272	37278244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396
tx.2342	chr11	+	2292	3	FSM	ENSMUSG00000058755.4	ENSMUST00000075221.3	2272	3	-19	-1	-19	1	multi-exon	TRUE	canonical	3	46	junction_2	1.5	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCAGTCTTTTATT	8274	False	NA	NA	False	NA	NA	NA	4186400	4191027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4186914_4188405_4188543_4189385
tx.23420	chr17	+	5858	17	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	679	3	intron_retention	FALSE	canonical	1	1	junction_2	28.894676737247	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCACCTCATCCACTGT	NA	False	NA	NA	False	NA	NA	NA	37360148	37385185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_37362052_37362498_37362556_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
tx.23421	chr17	-	2913	11	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.96106046406767	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTCCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43977938	43952781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_43954568_43957911_43958015_43958582_43958676_43960515_43960601_43964252_43964366_43968572_43968696_43970706_43970790_43970887_43970990_43972504_43972590_43974964_43975157_43977790
tx.23422	chr17	+	3360	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	17	1441	17	-1441	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAGAACTTGACCCTA	NA	False	NA	NA	False	NA	NA	NA	44389752	44396009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_44389874_44391537_44392402_44393634
tx.23423	chr17	-	4158	8	FSM	ENSMUSG00000023935.11	ENSMUST00000024731.9	1160	8	60	-3058	1	1	multi-exon	TRUE	canonical	2	8	junction_7	6.20730313782869	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTTGTAATATGGTA	NA	False	NA	NA	False	NA	NA	NA	45785804	45756804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_45760118_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
tx.23424	chr17	+	2484	2	NIC	ENSMUSG00000037089.12	novel	2326	3	NA	NA	-3	0	intron_retention	FALSE	canonical	3	396	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	NA	False	NA	NA	NA	45874882	45878595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_45876006_45877234
tx.23425	chr17	-	4878	22	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	19	1	intron_retention	FALSE	canonical	3	105	junction_18	27.8965533189107	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGGCAGTCCCTCC	NA	False	NA	NA	False	NA	NA	NA	45997166	45971095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
tx.23426	chr17	+	1913	2	FSM	ENSMUSG00000023939.8	ENSMUST00000148537.2	510	2	-1308	-95	-1308	0	multi-exon	FALSE	canonical	3	1100	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	NA	False	NA	NA	NA	46005033	46009421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_46006499_46008973
tx.23427	chr17	-	1619	2	ISM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	51	3	51	-3	intron_retention	FALSE	canonical	3	95	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACTTTTGATTTAGACT	NA	False	NA	NA	False	NA	NA	NA	46464428	46458315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_46459211_46463704
tx.23428	chr17	-	3142	11	NNC	ENSMUSG00000023953.10	novel	3238	11	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	7.60328876210814	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7132	False	NA	NA	False	NA	NA	NA	46513562	46482280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505214_46505343_46509559_46509695_46510317_46510461_46513322
tx.23429	chr17	-	3006	10	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	131	junction_6	92.2216867454334	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5823	False	NA	NA	False	NA	NA	NA	46593935	46568801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
tx.2343	chr11	+	2118	3	NNC	ENSMUSG00000058755.4	novel	773	2	NA	NA	1061	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	20	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCAGTCTTTTATT	609	False	NA	NA	False	NA	NA	NA	4187480	4191027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_4187820_4188405_4188543_4189385
tx.23430	chr17	-	4257	20	FSM	ENSMUSG00000032842.14	ENSMUST00000095261.10	5266	20	1205	-196	-929	-4	multi-exon	TRUE	canonical	3	24	junction_18	9.6902155295076	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTTAAAAAAATACTATT	9656	False	NA	NA	False	NA	NA	NA	46635487	46614150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618
tx.23431	chr17	+	4416	11	NNC	ENSMUSG00000015597.18	novel	13060	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.409480176042	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTCTATTCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	46694659	46731846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559_46721804_46731340
tx.23432	chr17	-	1975	10	FSM	ENSMUSG00000067144.8	ENSMUST00000087012.7	1989	10	-43	57	-43	-57	multi-exon	FALSE	canonical	3	9	junction_9	10.8297714942322	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGGAAGTCATTGACT	2774	False	NA	NA	False	NA	NA	NA	46749426	46743165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46743444_46743872_46744080_46744500_46744610_46744774_46744990_46745474_46745585_46745810_46745935_46747734_46747904_46748004_46748160_46748248_46748353_46748922
tx.23433	chr17	+	6696	18	NIC	ENSMUSG00000064043.16	novel	3255	7	NA	NA	-26	-486	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	14.9504371486006	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGCTGTGCCTGCTTCC	NA	False	NA	NA	False	NA	NA	NA	47452115	47672397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_47452331_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
tx.23434	chr17	+	4584	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16099	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_5	13.4483967445938	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	1994	False	NA	NA	False	NA	NA	NA	47507213	47670388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
tx.23435	chr17	+	6562	14	NIC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	20244	367	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	12.9340612658361	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCTCTCTCAGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	47625238	47673250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
tx.23436	chr17	+	6889	4	NIC	ENSMUSG00000034729.17	novel	1113	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1493	junction_3	139.68854243956	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7148	False	NA	NA	False	NA	NA	NA	47679822	47689604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_47686035_47686858_47686968_47688684_47688775_47689126
tx.23437	chr17	-	2493	3	NNC	ENSMUSG00000086930.2	novel	978	3	NA	NA	-1866	-4	intron_retention	FALSE	canonical	2	7	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAACAGTGGAAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	48014787	48010899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_48013119_48013488_48013688_48014712
tx.23438	chr17	+	724	5	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3902	-1	3900	1	3prime_fragment	FALSE	canonical	3	133	junction_1	119.423615755009	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	NA	False	NA	NA	NA	48041668	48045408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
tx.23439	chr17	+	2231	5	ISM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	98307	4	716	-4	3prime_fragment	FALSE	canonical	3	86	junction_2	4.81534007106456	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCCAATAGCAGTACAT	NA	False	NA	NA	False	NA	NA	NA	50914737	50995508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
tx.2344	chr11	+	4131	3	FSM	ENSMUSG00000034394.15	ENSMUST00000040750.4	3798	3	-334	1	-35	-1	multi-exon	FALSE	canonical	3	7	junction_1	5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCTGGAGTGCATTGA	NA	False	NA	NA	False	NA	NA	NA	4216760	4222513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4217120_4218183_4218366_4218923
tx.23440	chr17	-	3366	4	NNC	ENSMUSG00000057835.8	novel	2018	4	NA	NA	293	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	9.67241208569794	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTCTCTTGGATAGC	NA	False	NA	NA	False	NA	NA	NA	56185637	56171891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_56173651_56175302_56175364_56175558_56175686_56184218
tx.23441	chr17	+	2672	4	FSM	ENSMUSG00000003198.11	ENSMUST00000224294.2	705	4	-311	-1656	37	7	multi-exon	FALSE	canonical	3	33	junction_1	7.87400787401181	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTATGTGTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56199156	56205935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56199861_56202820_56202948_56203140_56203202_56204155
tx.23442	chr17	+	4676	12	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-94	-806	intron_retention	TRUE	canonical	3	392	junction_3	52.2185489984558	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	56347344	56375026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56372426_56374406
tx.23443	chr17	+	1403	2	FSM	ENSMUSG00000044469.9	ENSMUST00000077788.7	2379	2	44	932	44	-932	multi-exon	FALSE	canonical	2	6	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTCACCAAACTTGTC	457	False	NA	NA	False	NA	NA	NA	56469520	56480023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56469607_56478706
tx.23444	chr17	-	5574	28	FSM	ENSMUSG00000013236.18	ENSMUST00000223859.2	5588	28	8	6	8	-1	multi-exon	FALSE	canonical	0	0	junction_13	79.1614661493084	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	NA	False	NA	NA	NA	56783431	56719431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
tx.23445	chr17	+	6470	14	FSM	ENSMUSG00000071054.13	ENSMUST00000182378.8	3628	14	-2828	-14	428	0	multi-exon	FALSE	canonical	3	511	junction_3	50.0930495125567	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	NA	False	NA	NA	False	NA	NA	NA	56901941	56913294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
tx.23446	chr17	-	2758	4	Antisense	novelGene_ENSMUSG00000040828.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTTGGGTCATACTGT	NA	False	NA	NA	False	NA	NA	NA	56971368	56964217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_-_56966549_56967234_56967284_56968073_56968167_56971083
tx.23447	chr17	+	3566	2	NIC	ENSMUSG00000002660.9	novel	983	6	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	1322	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGAAGCACCTTCCA	NA	False	NA	NA	False	NA	NA	NA	57297296	57303186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_57300554_57302877
tx.23448	chr17	+	561	3	FSM	ENSMUSG00000002661.15	ENSMUST00000074141.14	736	3	2	173	2	1	multi-exon	FALSE	canonical	3	32	junction_1	221	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGGGATCTTCAAATGA	369	False	NA	NA	False	NA	NA	NA	57304340	57306138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_57304568_57305670_57305796_57305929
tx.23449	chr17	+	1191	4	ISM	ENSMUSG00000044279.16	ENSMUST00000071826.10	1194	5	2996	-6	-130	0	3prime_fragment	TRUE	canonical	3	14	junction_1	93.9657147876584	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1396	False	NA	NA	False	NA	NA	NA	57369100	57372918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_57369229_57369594_57369767_57370636_57370699_57372089
tx.2345	chr11	-	1938	11	FSM	ENSMUSG00000020419.12	ENSMUST00000109949.8	1343	11	-10	-585	-10	16	multi-exon	FALSE	canonical	3	44	junction_4	69.004347689113	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACATGGGGTTTAATA	NA	False	NA	NA	False	NA	NA	NA	4391092	4295797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
tx.23450	chr17	+	1126	2	Antisense	novelGene_ENSMUSG00000073377.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	64841648	64843390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_+_64841801_64842416
tx.23451	chr17	-	188	2	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATCTCTGGGTTCAGA	2117	False	NA	NA	False	NA	NA	NA	66493339	66466260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_66466277_66493167
tx.23453	chr17	+	3908	20	NIC	ENSMUSG00000024044.20	novel	4073	22	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.9826220947193	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTCGTCTTCCATG	NA	False	NA	NA	False	NA	NA	NA	69463726	69596980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
tx.23454	chr17	-	3224	3	FSM	ENSMUSG00000100572.2	ENSMUST00000187090.2	764	3	-7	-2453	-7	2453	multi-exon	FALSE	canonical	3	43	junction_1	7	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCCCACAGCCAATTCAT	NA	False	NA	NA	False	NA	NA	NA	69584210	69579903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_69582902_69583120_69583191_69584054
tx.23455	chr17	-	3201	3	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	-3	2449	intron_retention	FALSE	canonical	3	14	junction_1	21.5	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	NA	False	NA	NA	NA	69584206	69579907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_69582887_69583120_69583191_69584054
tx.23456	chr17	-	1297	4	NNC	ENSMUSG00000024053.12	novel	3939	8	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	6.59966329107444	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTTTTCTGTATTTGG	NA	False	NA	NA	False	NA	NA	NA	71563368	71559166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_71560089_71562113_71562243_71562974_71563008_71563155
tx.23457	chr17	+	4782	16	NIC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	-133	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	63.8339512589761	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTATAGTCTTCGAT	9708	False	NA	NA	False	NA	NA	NA	74645848	74698107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74684035_74684116_74688964_74689036_74694028_74694070_74695184
tx.23458	chr17	+	6090	34	FSM	ENSMUSG00000001870.17	ENSMUST00000001927.12	6671	34	150	431	-100	0	multi-exon	FALSE	canonical	2	10	junction_21	5.00871600276228	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTGTGGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	75312712	75698331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
tx.23459	chr17	-	3572	2	FSM	ENSMUSG00000024070.16	ENSMUST00000130070.2	3508	2	-62	-2	-23	2	multi-exon	FALSE	canonical	3	186	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTGTCAGTTTC	NA	False	NA	NA	False	NA	NA	NA	79328268	79317553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_79320971_79328113
tx.2346	chr11	-	4101	4	NNC	ENSMUSG00000020419.12	novel	1969	11	NA	NA	12097	17	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	26.7374061735406	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATGGGGTTTAATAA	NA	False	NA	NA	False	NA	NA	NA	4365165	4295796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362340
tx.23460	chr17	-	4871	6	FSM	ENSMUSG00000024095.16	ENSMUST00000184889.2	4651	6	-176	-44	23	44	multi-exon	FALSE	canonical	0	0	junction_2	229.055975691533	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACTTCTTGAAAGAAGC	3486	False	NA	NA	False	NA	NA	NA	80369740	80352433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
tx.23461	chr17	+	2046	2	NIC	ENSMUSG00000055760.13	novel	1134	3	NA	NA	16	-22	intron_retention	FALSE	canonical	3	385	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTTTCGGGTTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	80531885	80535904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_80533194_80535166
tx.23462	chr17	+	4740	2	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGCCTTGGGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	80540175	80553792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_+_80540458_80549334
tx.23463	chr17	-	5700	8	ISM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	60842	299	60842	-299	3prime_fragment	FALSE	canonical	3	87	junction_5	18.9122571203903	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAATAAAGAAAAATA	1594	False	NA	NA	False	NA	NA	NA	80726556	80701478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437
tx.23464	chr17	-	4200	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-68	-2	combination_of_known_splicesites	TRUE	canonical	3	12	junction_31	57.3580363675178	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	NA	False	NA	NA	NA	81035590	80887942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222
tx.23465	chr17	+	680	2	NIC	ENSMUSG00000117431.2	novel	440	3	NA	NA	-319	4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGATGGTTGCTCTGGA	2159	False	NA	NA	False	NA	NA	NA	84316003	84320841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_84316398_84320555
tx.23466	chr17	-	6424	28	ISM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	21838	0	-8590	0	3prime_fragment	TRUE	canonical	3	46	junction_12	14.8191660276761	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCATCTCACATTGGC	NA	False	NA	NA	False	NA	NA	NA	84751706	84497503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245
tx.23467	chr17	-	4336	14	NNC	ENSMUSG00000024127.16	novel	3255	14	NA	NA	-41	1159	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	52.208843251019	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTTCTGAAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	85397710	85369738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397672
tx.23468	chr17	+	4744	21	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	20.231164079212	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	NA	False	NA	NA	NA	87590306	87689197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87601371_87601495_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
tx.23469	chr17	+	3841	2	ISM	ENSMUSG00000034998.19	ENSMUST00000134107.2	2892	3	-39	11682	8	3350	5prime_fragment	FALSE	canonical	3	288	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGTTACTCCCTC	NA	False	NA	NA	False	NA	NA	NA	88748146	88773815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_88748313_88770140
tx.2347	chr11	-	3063	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	12	-2492	10	2312	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATTGTTTGAATGGGT	NA	False	NA	NA	False	NA	NA	NA	4391093	4371755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
tx.23470	chr17	+	3079	2	FSM	ENSMUSG00000033855.16	ENSMUST00000137138.2	767	2	-12	-2300	-12	495	multi-exon	FALSE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTTTTCTTCTCTAG	NA	False	NA	NA	False	NA	NA	NA	88905099	88945557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_88905170_88942548
tx.23471	chr17	-	6924	8	NIC	ENSMUSG00000055660.10	novel	2560	8	NA	NA	12	-68	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	35.9500787657733	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGAATTAAAGACTTGT	NA	False	NA	NA	False	NA	NA	NA	95057435	95030085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056864
tx.23472	chr17	-	2390	2	ISM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	-15	19592	-15	22	5prime_fragment	FALSE	canonical	3	86	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAATCTACCTCATCTG	NA	False	NA	NA	False	NA	NA	NA	95057462	95054104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_95055846_95056813
tx.23473	chr17	+	449	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19017	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	29.2232783924049	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCATGGTTCATTTTG	NA	False	NA	NA	False	NA	NA	NA	95057542	95101577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95101454
tx.23474	chr17	+	6734	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-7	17006	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	74.7980614722066	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGAGTCTCTTTGATG	NA	False	NA	NA	False	NA	NA	NA	95057520	95099566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092951_95093195
tx.23475	chr17	+	2545	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	12595	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	28.1108915230774	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGGGACACTTCATAC	NA	False	NA	NA	False	NA	NA	NA	95057543	95095155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912
tx.23476	chr18	+	4419	2	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8	False	NA	NA	False	NA	NA	NA	3000101	3014269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_3000266_3010014
tx.23478	chr18	-	2674	7	NIC	ENSMUSG00000063889.17	novel	1996	8	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	28.095076674274	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTGTATGTCTAT	13	True	NA	NA	False	NA	NA	NA	3337617	3266353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_3268130_3273421_3273579_3295039_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
tx.23479	chr18	-	2301	8	NIC	ENSMUSG00000063889.17	novel	2662	10	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	28.4905999535686	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGCCTGTGTGTATGTC	81	False	NA	NA	False	NA	NA	NA	3337608	3266356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_3267733_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
tx.2348	chr11	-	3348	3	ISM	ENSMUSG00000034354.18	ENSMUST00000040448.13	5534	18	57847	-6	-55	-1	3prime_fragment	FALSE	canonical	3	144	junction_2	51.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAACGAGTTCTAATTCTT	2748	False	NA	NA	False	NA	NA	NA	4438421	4430868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_4432940_4435362_4435452_4437233
tx.23480	chr18	+	8377	3	ISM	ENSMUSG00000024234.8	ENSMUST00000234924.2	1880	7	4742	2	4742	0	3prime_fragment	FALSE	canonical	3	221	junction_2	2	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	NA	False	NA	NA	False	NA	NA	NA	4387987	4397328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_4395067_4395155_4395230_4396104
tx.23481	chr18	-	5833	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-18	intron_retention	TRUE	canonical	0	0	junction_1	281.066818057589	666	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-1	True	NA	NA	False	NA	NA	NA	6241519	6201019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_6202204_6202380_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
tx.23482	chr18	-	4825	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.9193032764388	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTTTCAAGATTATTG	-33	True	NA	NA	False	NA	NA	NA	7626877	7347958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
tx.23483	chr18	-	4047	2	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCACAAACATTAAAAAAAA	6178	False	NA	NA	False	NA	NA	NA	7862914	7856666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_-_7858990_7861190
tx.23484	chr18	-	5803	11	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	31.2923313289374	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTAACCATGACTT	-11	True	NA	NA	False	NA	NA	NA	9450140	9312314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9399211_9399279_9449517
tx.23485	chr18	+	3942	20	NIC	ENSMUSG00000042942.19	novel	8420	33	NA	NA	-34	-4626	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.34802615524902	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTAGAAAATTCATATG	209	False	NA	NA	False	NA	NA	NA	10325142	10533663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_10325290_10449929_10450037_10458221_10458382_10458577_10458776_10469341_10469519_10474218_10474396_10476665_10476789_10495096_10495226_10498950_10499068_10499883_10500004_10500940_10501079_10503157_10503344_10509082_10509410_10510627_10510757_10511328_10511464_10515193_10515392_10522087_10522269_10523206_10523400_10529575_10529707_10532794
tx.23486	chr18	+	2776	6	ISM	ENSMUSG00000005836.11	ENSMUST00000047762.10	3234	7	1748	2	-820	-2	3prime_fragment	FALSE	canonical	1	1	junction_1	0.894427190999916	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCCTTCCTTTTCATC	149	False	NA	NA	False	NA	NA	NA	11054217	11085633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_11055190_11059051_11059219_11063017_11063144_11064509_11064598_11064687_11064792_11084314
tx.23487	chr18	-	1245	5	NNC	ENSMUSG00000049411.16	novel	2802	13	NA	NA	-5	-777	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.61769203083567	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTCATACCAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	12254576	12217825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_12218725_12237155_12237238_12246451_12246530_12251460_12251508_12254437
tx.23488	chr18	+	642	2	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	20895474	20911827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_20895821_20911531
tx.23489	chr18	+	5855	2	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-299	-16612	intron_retention	FALSE	canonical	3	103	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	21194680	21200630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_21194811_21194905
tx.2349	chr11	-	5750	19	NNC	ENSMUSG00000034354.18	novel	5534	18	NA	NA	5	1	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_18	68.2081961694587	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	NA	False	NA	NA	False	NA	NA	NA	4544810	4430866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4496188_4496269_4544602
tx.23490	chr18	+	7965	15	NIC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-44	-4	intron_retention	FALSE	canonical	3	34	junction_4	6.03772155971547	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAATTGGTGATCTTTC	NA	False	NA	NA	False	NA	NA	NA	21194935	21233252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
tx.23491	chr18	+	4208	15	NIC	ENSMUSG00000024302.17	novel	3860	25	NA	NA	700	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	2.58429321644651	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCAAAGTTATCCTACC	NA	False	NA	NA	False	NA	NA	NA	23630591	23768830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_23630761_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23766274
tx.23492	chr18	+	6962	3	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	90	junction_1	1	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	24087746	24097728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_24089911_24090111_24090254_24093072
tx.23493	chr18	-	5003	2	ISM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	3492	16	3002	-16	3prime_fragment	FALSE	canonical	3	258	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGCTCTGTTAACCTC	NA	False	NA	NA	False	NA	NA	NA	24150375	24142774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_24147743_24150340
tx.23494	chr18	-	3010	4	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	18	1652	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	113.702340443028	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCTTGGAATTGC	NA	False	NA	NA	False	NA	NA	NA	24153849	24145329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_24147743_24150340_24150489_24150724_24151093_24153768
tx.23495	chr18	+	3867	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	176.656972549665	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTCTGAGTAGTTGTG	NA	False	NA	NA	False	NA	NA	NA	24338828	24419875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_24339138_24365655_24365711_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
tx.23496	chr18	+	176	2	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAATTATAGGAA	NA	False	NA	NA	False	NA	NA	NA	24367689	24454048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_24367837_24454019
tx.23497	chr18	+	2984	3	Antisense	novelGene_ENSMUSG00000065532.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGTACCCAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	24508694	24577243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr18_+_24508840_24538583_24538727_24574547
tx.23499	chr18	-	3769	6	NIC	ENSMUSG00000024269.12	novel	4159	7	NA	NA	-24	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	108.691490007268	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTCAAAACAAAATCAGGTA	NA	False	NA	NA	False	NA	NA	NA	25301775	25269106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25291300_25291381_25301583
tx.235	chr1	-	2040	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	14	2566	-12	-20	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACATGGGTTTTGAGCT	NA	False	NA	NA	False	NA	NA	NA	43866946	43788691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
tx.2350	chr11	-	5656	18	FSM	ENSMUSG00000034354.18	ENSMUST00000109943.10	5674	18	17	1	17	-1	multi-exon	FALSE	canonical	3	144	junction_2	25.6297837124855	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAACGAGTTCTAATTCTT	NA	False	NA	NA	False	NA	NA	NA	4544798	4430868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
tx.23500	chr18	-	3233	10	NNC	ENSMUSG00000024268.17	novel	2492	13	NA	NA	-3870	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.2497379429012	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAACCTCAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	25638166	25610678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_25612769_25619850_25620023_25620296_25620376_25624197_25624282_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
tx.23501	chr18	+	1857	10	NIC	ENSMUSG00000024395.10	novel	685	5	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	2.62936879248872	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGAGTGTCTGTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	32055316	32091672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_32055530_32074792_32074953_32077191_32077259_32077488_32077610_32087488_32087639_32088310_32088462_32089310_32089404_32090005_32090055_32090290_32090367_32090895
tx.23502	chr18	+	1568	9	NNC	ENSMUSG00000024395.10	novel	450	4	NA	NA	4110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.95803989154981	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGAGTGTCTGTGTGGTT	7695	False	NA	NA	False	NA	NA	NA	32076580	32091672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_32076665_32077191_32077259_32077488_32077610_32087488_32087639_32088310_32088462_32089310_32089404_32090005_32090055_32090290_32090367_32090895
tx.23503	chr18	+	5654	10	ISM	ENSMUSG00000024382.14	ENSMUST00000142213.8	2781	14	5446	-3745	5446	3745	3prime_fragment	FALSE	canonical	3	78	junction_1	15.0341175782959	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAAGACTTAACTTTT	1486	False	NA	NA	False	NA	NA	NA	32378852	32406949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
tx.23504	chr18	-	7792	6	FSM	ENSMUSG00000024378.10	ENSMUST00000119991.8	941	6	-87	-6764	9	2714	multi-exon	FALSE	canonical	1	1	junction_2	21.0959711793508	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTGTGTGCCTGATT	NA	False	NA	NA	False	NA	NA	NA	33346906	33329693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_33336869_33338273_33338379_33339172_33339300_33341229_33341280_33342095_33342211_33346686
tx.23505	chr18	-	2064	4	FSM	ENSMUSG00000042834.16	ENSMUST00000051087.16	659	4	262	-1667	-42	1	multi-exon	FALSE	canonical	3	37	junction_1	5.90668171555645	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGCTTTGGCTCATTA	NA	False	NA	NA	False	NA	NA	NA	33596530	33570073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430
tx.23506	chr18	-	5017	21	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-2	1777	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_16	11.2338773359869	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	NA	False	NA	NA	NA	34639868	34573626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
tx.23507	chr18	-	6150	10	ISM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	46175	-1778	2559	1778	3prime_fragment	FALSE	canonical	3	35	junction_8	4.59468291736341	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	2193	False	NA	NA	False	NA	NA	NA	34593701	34573625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716
tx.23508	chr18	-	2059	8	FSM	ENSMUSG00000024366.9	ENSMUST00000025224.9	1997	8	-61	-1	-61	1	multi-exon	FALSE	canonical	0	0	junction_2	0.903507902905251	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCCTAATTTTCTTAC	9289	False	NA	NA	False	NA	NA	NA	34853501	34822949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_34823677_34823868_34823958_34824317_34824453_34824601_34824706_34828616_34828930_34837533_34837627_34844168_34844457_34853191
tx.23509	chr18	+	1906	8	FSM	ENSMUSG00000038555.8	ENSMUST00000043484.8	1926	8	17	3	17	-3	multi-exon	FALSE	canonical	2	3	junction_2	2.56347977784662	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGATCTCTGCGTT	NA	False	NA	NA	False	NA	NA	NA	34973658	34980513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_34973841_34975506_34975580_34975909_34975987_34978304_34978426_34978627_34978742_34978997_34979146_34979241_34979373_34979453
tx.2351	chr11	-	5760	19	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	20	2	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	50.097466730759	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGCGAACGAGTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	4544795	4430872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
tx.23510	chr18	-	907	4	FSM	ENSMUSG00000024353.6	ENSMUST00000025211.6	904	4	-1	-2	-1	2	multi-exon	TRUE	canonical	2	5	junction_1	0.471404520791032	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTTGGCTGTTGAAGG	NA	False	NA	NA	False	NA	NA	NA	35782421	35780317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_35780780_35780876_35780988_35781311_35781437_35782212
tx.23511	chr18	-	1803	5	ISM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	48	5	-7	-1	intron_retention	FALSE	canonical	3	154	junction_2	14.7203091000155	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCTGTAATGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	35795191	35789746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844
tx.23512	chr18	-	592	5	NIC	ENSMUSG00000024352.13	novel	702	6	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	65.5820097282784	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCTGTAATGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	35795200	35789746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35795064
tx.23513	chr18	-	938	2	Antisense	novelGene_ENSMUSG00000024483.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCGGCTCCTCACTAATT	7291	False	NA	NA	False	NA	NA	NA	36693267	36692205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr18_-_36692806_36692929
tx.23514	chr18	+	1641	9	ISM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	73	2551	-1	14	5prime_fragment	FALSE	canonical	3	53	junction_4	7.36545993132812	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTGCACTTCTTGTA	NA	False	NA	NA	False	NA	NA	NA	36868193	36872899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207
tx.23515	chr18	-	4630	19	NNC	ENSMUSG00000038524.14	novel	4270	20	NA	NA	-4	1	intron_retention	TRUE	non_canonical	0	0	junction_8	3.73876919075361	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGTCATGTGTTCGTCC	NA	False	NA	NA	False	NA	NA	NA	38102814	38090485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097218_38097361_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
tx.23516	chr18	-	3881	3	FSM	ENSMUSG00000051375.16	ENSMUST00000159405.3	3880	3	-1	0	-1	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTATTTTCT	5092	False	NA	NA	False	NA	NA	NA	38345024	38329746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_38332582_38335796_38336660_38344841
tx.23517	chr18	+	6110	6	ISM	ENSMUSG00000036452.19	ENSMUST00000155576.8	2280	23	292803	-5120	-5156	-2	3prime_fragment	FALSE	canonical	2	6	junction_4	11.2356575241505	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTGTGTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	39419331	39509335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_39419740_39429837_39429977_39439754_39439906_39490605_39490717_39496169_39496262_39504126
tx.23518	chr18	-	6766	9	NNC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	-3	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3063832457977	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGACTCCCAACATGT	NA	False	NA	NA	False	NA	NA	NA	39622944	39543612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622492
tx.23519	chr18	-	6570	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	-23	-10	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	22.6770809408971	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTCCCAACATGTTTT	NA	False	NA	NA	False	NA	NA	NA	39624377	39543609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39624124
tx.2352	chr11	+	4908	19	NIC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	62.2245039264186	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	4587704	4635699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_4587823_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
tx.23520	chr18	-	4913	5	NIC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	33	1505	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	123.406847459936	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCATTGAATGCTTGTT	NA	False	NA	NA	False	NA	NA	NA	40352358	40335443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351956
tx.23521	chr18	+	3450	3	ISM	ENSMUSG00000024491.17	ENSMUST00000237798.2	5565	16	34089	-15	34089	0	3prime_fragment	FALSE	canonical	3	127	junction_2	3.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	NA	False	NA	NA	False	NA	NA	NA	42466274	42474607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_42466463_42470027_42470139_42471456
tx.23522	chr18	+	4827	4	ISM	ENSMUSG00000034653.12	ENSMUST00000201507.2	4290	17	27634	28	27444	-21	3prime_fragment	FALSE	canonical	3	57	junction_1	3.85861230093008	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACTTATCAAATGAAAT	NA	False	NA	NA	False	NA	NA	NA	45015745	45022763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_45018394_45019306_45019490_45020674_45020763_45020855
tx.23523	chr18	-	7288	10	NIC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	-3	-127	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	55.4071350755835	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCTATCTACCTACATT	NA	False	NA	NA	False	NA	NA	NA	46413900	46368544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_46374769_46378818_46378917_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
tx.23524	chr18	-	3305	7	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.8060830822112	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCAGAAGATTCTGGTTT	NA	False	NA	NA	False	NA	NA	NA	49888675	49829218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_49831568_49833325_49833455_49845996_49846157_49856688_49856882_49857179_49857275_49861435_49861527_49888387
tx.23525	chr18	-	2536	7	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	14	662	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	93.7259598806838	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTATGATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	49888620	49829877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_49831568_49833325_49833455_49843562_49843668_49856688_49856882_49857179_49857275_49861435_49861527_49888387
tx.23526	chr18	+	1737	10	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	0	366	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	339.521158816281	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATAGATCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	57487817	57522673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_57487964_57495330_57495398_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
tx.23527	chr18	-	3926	15	ISM	ENSMUSG00000024598.10	ENSMUST00000025497.8	11041	65	172254	-23	-2255	23	3prime_fragment	FALSE	canonical	0	0	junction_12	2.57638411383878	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAATGGCTGGTCCATT	NA	False	NA	NA	False	NA	NA	NA	58171305	58141671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_58143705_58145285_58145464_58146723_58146956_58151808_58151929_58153441_58153571_58154145_58154263_58156244_58156368_58158097_58158224_58159403_58159611_58160888_58161015_58168344_58168477_58168918_58169042_58170033_58170154_58170773_58170900_58171271
tx.23528	chr18	+	5433	23	NNC	ENSMUSG00000024620.12	novel	5407	23	NA	NA	-28	1	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_6	4.07370118225601	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGATTTCTCAGGGTTGG	NA	False	NA	NA	False	NA	NA	NA	61178193	61218134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_61178645_61193215_61193262_61194276_61194598_61196938_61197206_61197868_61197997_61198076_61198252_61198786_61198980_61199569_61199686_61201167_61201292_61201816_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
tx.23529	chr18	-	1675	5	ISM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	92543	8	92512	-8	3prime_fragment	FALSE	canonical	3	43	junction_4	5.22015325445528	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTATTTATGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	61440959	61431214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277
tx.2353	chr11	+	4942	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	0	-2292	0	-22	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	464	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTCCTGAGTCTCACT	NA	False	NA	NA	False	NA	NA	NA	4587746	4635677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
tx.23530	chr18	-	2954	15	NNC	ENSMUSG00000033032.16	novel	3444	19	NA	NA	33189	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	9.29998902786274	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAGAGGGTAGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	61886493	61863330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61886437
tx.23531	chr18	-	3817	3	FSM	ENSMUSG00000041789.8	ENSMUST00000067450.3	2101	3	-10	-1706	-10	1706	multi-exon	FALSE	canonical	1	1	junction_1	4	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGATGGTCCTGGTGCT	NA	False	NA	NA	False	NA	NA	NA	62889396	62883038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_62886405_62888196_62888246_62888994
tx.23532	chr18	-	1648	3	FSM	ENSMUSG00000024518.5	ENSMUST00000025396.5	1672	3	21	3	1	-3	multi-exon	FALSE	canonical	2	5	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGTGCTCATCGACTAC	NA	False	NA	NA	False	NA	NA	NA	66072139	66067709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_66068561_66071090_66071345_66071596
tx.23533	chr18	-	3254	9	NIC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	14	-5	intron_retention	FALSE	canonical	3	29	junction_3	9.69455388349562	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGAGTTTGGATCTTT	NA	False	NA	NA	False	NA	NA	NA	67378724	67358118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
tx.23534	chr18	-	3338	11	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	24.0310216179005	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTTGGATGTCTTGA	801	False	NA	NA	False	NA	NA	NA	67774435	67750869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_67752443_67752605_67752824_67756206_67756441_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
tx.23535	chr18	-	4109	5	NIC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	-17	-5590	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	95.0299294959225	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTCTCCCTGACCTAT	NA	False	NA	NA	False	NA	NA	NA	68433290	68398847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412337_68412500_68433144
tx.23536	chr18	+	2702	4	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	65466	-2001	-1789	671	3prime_fragment	FALSE	canonical	3	43	junction_1	45.7626728046147	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATTTATGTTCATTT	NA	False	NA	NA	False	NA	NA	NA	69810980	69818270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_69811189_69814639_69814870_69815753_69815895_69816147
tx.23537	chr18	+	2592	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84964	-1674	-1747	591	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTATCAGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	69811022	69818190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
tx.23538	chr18	-	4891	3	ISM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	7147	3	7147	-3	3prime_fragment	FALSE	canonical	3	22	junction_1	4	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCCTTGTCCTGCGGT	NA	False	NA	NA	False	NA	NA	NA	73880403	73868111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_73872372_73875407_73875873_73880237
tx.23539	chr18	+	6217	39	FSM	ENSMUSG00000025885.19	ENSMUST00000074157.13	6745	39	-164	692	-164	-4	multi-exon	TRUE	canonical	0	0	junction_1	1.36943282434291	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTGCCTTTGTGGGTCT	NA	False	NA	NA	False	NA	NA	NA	74575443	74903872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_74575879_74702837_74702949_74710525_74710698_74713460_74713606_74749993_74750151_74758632_74758777_74760241_74760324_74767531_74767640_74771112_74771223_74776997_74777264_74786430_74786513_74787000_74787142_74794677_74794801_74795733_74795818_74809671_74809828_74810491_74810590_74815619_74815707_74828442_74828555_74831256_74831469_74833642_74833800_74834515_74834756_74840934_74841169_74846618_74846704_74847896_74848031_74849029_74849150_74850040_74850179_74853907_74853974_74855403_74855644_74856827_74856929_74864715_74864915_74866981_74867076_74869216_74869361_74873544_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920_74894096_74895646_74895728_74903367
tx.2354	chr11	+	184	2	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGAGGATTAGCTTT	NA	False	NA	NA	False	NA	NA	NA	4627775	4827171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_4627827_4827038
tx.23540	chr18	+	2376	2	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	81	-106	intron_retention	FALSE	canonical	3	8261	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	75133628	75136345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_75135924_75136264
tx.23541	chr18	+	2262	11	NIC	ENSMUSG00000024563.17	novel	1305	8	NA	NA	-64	-9	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.1644197742522	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGACAAGTGGATTAACT	NA	False	NA	NA	False	NA	NA	NA	76375052	76438356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
tx.23542	chr18	+	1594	7	FSM	ENSMUSG00000025421.16	ENSMUST00000148955.3	3069	7	-24	1499	-24	-2	multi-exon	FALSE	canonical	0	0	junction_2	159.414292542001	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTTAATTAGACATTG	NA	False	NA	NA	False	NA	NA	NA	77032108	77059099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_77032224_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
tx.23543	chr18	-	1671	8	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	13	0	13	0	intron_retention	FALSE	canonical	3	1190	junction_6	94.0998167384192	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	77855467	77845267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563
tx.23544	chr18	-	3196	7	NNC	ENSMUSG00000059336.15	novel	3665	9	NA	NA	9366	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.942809041582063	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTCTCATGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	78157180	78143307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_78145784_78147244_78147295_78152806_78152942_78153123_78153272_78154568_78154762_78156880_78157010_78157115
tx.23545	chr18	+	6550	6	FSM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	-147	1300	-147	-1300	multi-exon	FALSE	canonical	2	4	junction_1	92.9184588765871	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCGCTCACTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	82932609	83022139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_82932849_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
tx.23546	chr18	+	8008	2	Antisense	novelGene_ENSMUSG00000024645.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTACTCAGAGATTACC	5943	False	NA	NA	False	NA	NA	NA	84958049	84966098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr18_+_84960099_84960139
tx.23547	chr18	-	3695	3	NIC	ENSMUSG00000024645.6	novel	2418	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	61	junction_2	2.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	84969648	84964315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_84965871_84965958_84967578_84969127
tx.23548	chr18	-	3218	4	FSM	ENSMUSG00000056153.16	ENSMUST00000145120.3	1004	4	-32	-2182	-3	106	multi-exon	FALSE	canonical	3	33	junction_2	77.821733611005	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAAACTATGTCTGATA	NA	False	NA	NA	False	NA	NA	NA	88912466	88886191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_88889043_88905115_88905177_88905332_88905458_88912285
tx.23549	chr18	+	3509	13	FSM	ENSMUSG00000023066.11	ENSMUST00000235272.2	3260	13	-46	-203	-28	203	multi-exon	FALSE	canonical	3	19	junction_9	4.44331582892276	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAGTTTTAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	88989885	89030506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975
tx.2355	chr11	-	426	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	7	1	-1	-1	multi-exon	FALSE	canonical	3	8152	junction_1	0	1177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCTTTTGCACGAGTCC	NA	False	NA	NA	False	NA	NA	NA	4654335	4651973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4652221_4654156
tx.23550	chr19	+	3675	2	FSM	ENSMUSG00000024843.16	ENSMUST00000154467.8	3605	2	-67	-3	-8	3	multi-exon	FALSE	canonical	3	158	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	5712	False	NA	NA	False	NA	NA	NA	3901764	3917673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3902414_3914647
tx.23551	chr19	-	2819	14	FSM	ENSMUSG00000034616.18	ENSMUST00000113852.6	2705	14	-105	-9	-105	9	multi-exon	TRUE	canonical	1	1	junction_12	2.03228381748045	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCATTTGTGACAAAG	2245	False	NA	NA	False	NA	NA	NA	4319313	4311714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4312661_4313574_4313846_4313935_4314137_4314341_4314489_4315130_4315178_4315319_4315449_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4317774_4318007_4318572_4318611_4319042
tx.23552	chr19	-	3281	12	NIC	ENSMUSG00000005986.17	novel	2139	15	NA	NA	23	0	intron_retention	FALSE	canonical	2	10	junction_2	3.93962703273099	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGCTGTCCTGCGTGGT	883	False	NA	NA	False	NA	NA	NA	4333140	4320207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_4320578_4320821_4320914_4320993_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
tx.23553	chr19	-	5388	11	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-21	26	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	54.5750858909081	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	4150	False	NA	NA	False	NA	NA	NA	4384050	4366171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4382468_4382514_4383670
tx.23554	chr19	-	6544	21	NNC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-138	26	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_20	33.0860998003693	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	NA	False	NA	NA	NA	4447261	4366171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447218
tx.23555	chr19	-	6031	16	ISM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	40244	-15	6054	15	3prime_fragment	FALSE	canonical	3	88	junction_15	23.6402669659677	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAACTAACCCCT	NA	False	NA	NA	False	NA	NA	NA	4406861	4366182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775
tx.23556	chr19	+	1831	5	FSM	ENSMUSG00000087132.9	ENSMUST00000133871.8	984	5	-56	-791	-56	1	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGTGTTTGCCTGTAT	NA	False	NA	NA	False	NA	NA	NA	4489530	4499002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4489699_4493769_4493817_4494030_4494067_4497324_4497455_4497552
tx.23557	chr19	+	4941	22	ISM	ENSMUSG00000067889.8	ENSMUST00000008991.8	8299	37	26678	8	-3934	-8	3prime_fragment	FALSE	canonical	3	24	junction_4	6.58728246315832	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCCTCTGGGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	4787872	4802380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
tx.23558	chr19	+	1925	3	FSM	ENSMUSG00000033760.18	ENSMUST00000183008.2	1211	3	-50	-664	4	23	multi-exon	FALSE	canonical	1	3	junction_2	39	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGCTGTTTTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	4806541	4811393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4806690_4807273_4807698_4810040
tx.23559	chr19	+	4523	3	FSM	ENSMUSG00000033760.18	ENSMUST00000182821.8	1443	3	-7	-3073	-7	9	multi-exon	FALSE	canonical	3	52	junction_2	14.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGGCCATTATTTA	NA	False	NA	NA	False	NA	NA	NA	4806563	4815977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4806690_4807273_4807698_4812004
tx.2356	chr11	-	512	3	FSM	ENSMUSG00000059534.9	ENSMUST00000151559.2	510	3	-1	-1	-1	-1	multi-exon	FALSE	canonical	3	506	junction_1	31	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCTTTTGCACGAGTCC	NA	False	NA	NA	False	NA	NA	NA	4654335	4651973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4652221_4653903_4653990_4654156
tx.23560	chr19	-	2410	5	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	8266	0	multi-exon	TRUE	canonical	3	27	junction_4	25.5281707139387	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	4853274	4835180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843_4844038_4852578
tx.23561	chr19	+	4572	9	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	99	3	intron_retention	FALSE	canonical	3	23	junction_2	5.58877222652704	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTTGATAACTAGAAATA	NA	False	NA	NA	False	NA	NA	NA	5100607	5107102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
tx.23562	chr19	-	1746	6	FSM	ENSMUSG00000024873.8	ENSMUST00000025805.8	1343	6	-407	4	-407	-4	multi-exon	FALSE	canonical	3	9	junction_5	5.2687759489278	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCCCAATTCTGCTTC	9645	False	NA	NA	False	NA	NA	NA	5148956	5142899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5143526_5143699_5143844_5143947_5144061_5144311_5144360_5144759_5144829_5148210
tx.23563	chr19	+	3171	5	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	7	-21	intron_retention	FALSE	canonical	3	703	junction_1	61.8036204441131	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTTAACTTCTCT	2003	False	NA	NA	False	NA	NA	NA	5416979	5421533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
tx.23564	chr19	+	1487	9	NIC	ENSMUSG00000024911.8	novel	1209	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	126	junction_5	11.4455231422596	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTCCTTGTTCCAGG	NA	False	NA	NA	False	NA	NA	NA	5510643	5515079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5514244_5514361_5514460_5514952
tx.23565	chr19	-	3636	16	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	1	7	intron_retention	FALSE	canonical	3	9	junction_15	18.9743686763662	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8145	False	NA	NA	False	NA	NA	NA	5713687	5701247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711687_5713631
tx.23566	chr19	+	3493	24	NNC	ENSMUSG00000024940.12	novel	5190	28	NA	NA	240	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.50594755669384	3	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGTTGGAAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	5796000	5808560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_5796149_5796326_5796433_5796670_5796764_5796928_5797052_5797440_5797600_5797698_5797900_5798693_5798767_5798897_5798997_5800976_5801103_5801199_5801332_5801426_5801556_5801781_5801905_5802046_5802170_5803660_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807338_5807501_5807574_5807656_5807738_5807871_5807968
tx.23567	chr19	+	805	2	FSM	ENSMUSG00000110156.3	ENSMUST00000209642.2	647	2	78	-236	-53	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCACACTACACAGCGG	9302	False	NA	NA	False	NA	NA	NA	5962927	5964857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5963101_5964225
tx.23568	chr19	-	1492	2	FSM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	-8	1927	-8	-1927	multi-exon	FALSE	canonical	3	11	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGAGCATCCTGTCCCC	NA	False	NA	NA	False	NA	NA	NA	5974852	5967590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5969022_5974791
tx.23569	chr19	+	1579	10	NIC	ENSMUSG00000024786.10	novel	1562	11	NA	NA	-52	3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4.54062594260057	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCCTGAGGTTTAAGC	7986	False	NA	NA	False	NA	NA	NA	6234365	6274258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_6234613_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
tx.2357	chr11	+	788	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	117	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	4654672	4687669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
tx.23570	chr19	+	3921	23	ISM	ENSMUSG00000024769.8	ENSMUST00000025681.8	5995	37	8100	2	-7252	-2	3prime_fragment	FALSE	canonical	2	5	junction_5	6.83225819668107	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTTCCCTGCCTAGG	-38	True	NA	NA	False	NA	NA	NA	6364585	6375680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_6364648_6364734_6364811_6365019_6365127_6365201_6365317_6365668_6365818_6365893_6365983_6366228_6366282_6366370_6366470_6366548_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6367716_6368387_6368605_6370108_6370172_6370272_6370873_6371686_6371785_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
tx.23571	chr19	+	2862	8	NIC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	-2053	3	intron_retention	FALSE	canonical	3	12	junction_3	7.35679610833356	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTGCCTAGGTCTGT	5161	False	NA	NA	False	NA	NA	NA	6369784	6375685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_6370873_6371686_6371785_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
tx.23572	chr19	+	4502	31	FSM	ENSMUSG00000024948.16	ENSMUST00000123468.9	2875	31	-51	-1576	8	2	multi-exon	FALSE	canonical	3	17	junction_1	5.4793551932078	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAACCTGGATGGTTTTTT	1430	False	NA	NA	False	NA	NA	NA	6391228	6405474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_6391376_6391488_6391547_6391773_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
tx.23573	chr19	+	691	5	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	4628	-2	4628	2	3prime_fragment	FALSE	canonical	3	149	junction_1	9.57535900110278	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	NA	False	NA	NA	NA	6463062	6465243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
tx.23574	chr19	-	1858	5	ISM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	2	-2	2	2	intron_retention	FALSE	canonical	3	677	junction_3	18.1865334794732	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	6957806	6955106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340
tx.23575	chr19	-	947	5	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	88.1061149977685	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9976	False	NA	NA	False	NA	NA	NA	6969909	6965278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_6965477_6965556_6965644_6967048_6967234_6968085_6968180_6969526
tx.23576	chr19	-	883	7	NNC	ENSMUSG00000024963.13	novel	840	6	NA	NA	-19	0	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_3	78.2788817838715	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9926	False	NA	NA	False	NA	NA	NA	6969959	6965278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526_6969641_6969916
tx.23577	chr19	+	1260	10	NIC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-62	5	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	15.0185071014251	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGGTCTGGCTGGGT	8470	False	NA	NA	False	NA	NA	NA	7034115	7175427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175277
tx.23578	chr19	-	4177	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	106.764148164697	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	4103	False	NA	NA	False	NA	NA	NA	7318982	7252760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7318863
tx.23579	chr19	-	4145	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	105.935646083418	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3867	False	NA	NA	False	NA	NA	NA	7319218	7252760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7319131
tx.2358	chr11	+	793	6	FSM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	156	junction_1	205.698225563567	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	4654676	4687669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
tx.23580	chr19	+	2467	4	NIC	ENSMUSG00000060675.14	novel	3523	5	NA	NA	-10	401	intron_retention	TRUE	canonical	3	191	junction_2	16.9771087709958	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTATATACTAATTCTAA	NA	False	NA	NA	False	NA	NA	NA	7534813	7564477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_7535361_7552301_7552405_7556318_7556588_7562929
tx.23581	chr19	+	1919	2	NNC	ENSMUSG00000071661.8	novel	2004	2	NA	NA	-62	7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGGTGTTGGCTGGTTT	5366	False	NA	NA	False	NA	NA	NA	8779856	8782217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_8779896_8780337
tx.23582	chr19	+	2059	5	FSM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	3	16038	3	872	multi-exon	FALSE	canonical	3	15	junction_4	26.3853652618265	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCAAAGGTCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	8966650	8980522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_8979062
tx.23583	chr19	+	1672	4	ISM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	10857	-1140	492	940	3prime_fragment	FALSE	canonical	3	34	junction_3	19.6015872373189	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAATTGTTATCTTAAT	6953	False	NA	NA	False	NA	NA	NA	8977515	9055218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_8977621_8978039_8978228_9014522_9014623_9053939
tx.23584	chr19	+	4974	10	FSM	ENSMUSG00000024743.17	ENSMUST00000223586.2	1344	10	-458	-3172	-65	-1564	multi-exon	FALSE	canonical	2	4	junction_3	24.2827988705514	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCCTTGGCTGTTTCCTC	NA	False	NA	NA	False	NA	NA	NA	10366388	10428980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10399120_10399253_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
tx.23585	chr19	-	2691	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	17	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	163.137978410914	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGGGGCCATCTCTC	7154	False	NA	NA	False	NA	NA	NA	11796289	11754850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11780857_11780942_11796055
tx.23586	chr19	-	4086	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	816	78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	61.0696829272881	3	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAGATTGTTAAGTACT	NA	False	NA	NA	False	NA	NA	NA	14574599	14425435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574452
tx.23588	chr19	+	6638	4	FSM	ENSMUSG00000024750.12	ENSMUST00000141568.2	1582	4	-3691	-1365	11	-261	multi-exon	FALSE	canonical	3	378	junction_3	0.816496580927726	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTTTATTGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	21249652	21259393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_21254454_21255018_21255123_21256988_21257115_21257786
tx.23589	chr19	+	5500	21	ISM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	19681	0	19635	0	3prime_fragment	FALSE	canonical	3	59	junction_1	15.8316139417306	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTATTTGTGAATC	NA	False	NA	NA	False	NA	NA	NA	21775386	21835691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
tx.2359	chr11	-	2981	5	NNC	ENSMUSG00000009075.3	novel	2628	5	NA	NA	-376	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9916643505649	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAATGTCAGCCCTGGTT	7188	False	NA	NA	False	NA	NA	NA	4697154	4686897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_4688932_4689123_4689278_4689553_4689667_4690368_4690513_4696618
tx.23590	chr19	-	5226	2	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	359	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	22705268	22699838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr19_-_22700552_22700755
tx.23591	chr19	+	829	2	Genic_Genomic	ENSMUSG00000051255.7	novel	633	1	NA	NA	-22	243	multi-exon	FALSE	canonical	3	409	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	23653189	23654087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr19_+_23653644_23653712
tx.23592	chr19	+	6025	34	NIC	ENSMUSG00000024921.18	novel	5913	33	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_28	7.35034340758079	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGTGTTGGTACTTTC	NA	False	NA	NA	False	NA	NA	NA	26584666	26755676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_26584944_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26737277_26737332_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
tx.23593	chr19	+	3346	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	-189	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	9.07309140559716	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTTTTGATTATTCCT	NA	False	NA	NA	False	NA	NA	NA	27194230	27227158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_27194349_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
tx.23594	chr19	+	3348	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	9.38675189355248	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGTTTTGATTATTC	NA	False	NA	NA	False	NA	NA	NA	27194410	27227156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_27194533_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
tx.23595	chr19	-	7455	10	FSM	ENSMUSG00000052942.14	ENSMUST00000065113.14	3382	10	-583	-3490	-172	-23	multi-exon	FALSE	canonical	0	0	junction_8	5.37024265493092	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCTTTTATACATGTT	NA	False	NA	NA	False	NA	NA	NA	28657649	28236273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28643152_28643637_28656995
tx.23596	chr19	-	7693	11	FSM	ENSMUSG00000052942.14	ENSMUST00000162022.8	7514	11	-179	0	-179	0	multi-exon	FALSE	canonical	0	0	junction_9	5.0950956811428	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTATTCTATTAATCCA	NA	False	NA	NA	False	NA	NA	NA	28657656	28236250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28643152_28643637_28656995
tx.23597	chr19	-	803	5	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	17.2825779327044	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAATGTCCTGCTGCTTG	NA	False	NA	NA	False	NA	NA	NA	29339284	29325998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29338216_29338328_29339196
tx.23598	chr19	-	2426	8	NNC	ENSMUSG00000087303.4	novel	2184	9	NA	NA	-10564	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	21.1978050461719	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTCTTCTGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	33739323	33697071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_33698425_33699077_33699150_33724238_33724349_33725834_33726034_33726818_33726937_33728653_33728760_33737292_33737435_33738997
tx.23599	chr19	+	4745	21	FSM	ENSMUSG00000041180.14	ENSMUST00000047247.12	4731	21	-20	6	10	-3	multi-exon	FALSE	canonical	3	10	junction_10	6.40683229060977	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCTTCAGTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	36532048	36598529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578831_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
tx.236	chr1	+	4644	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	-14	1	-6	-1	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	553	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAATTGGTCTTAATT	3298	False	NA	NA	False	NA	NA	NA	43973160	44042159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
tx.2360	chr11	-	3018	5	FSM	ENSMUSG00000009075.3	ENSMUST00000009219.3	2628	5	-396	6	-396	-6	multi-exon	FALSE	canonical	3	26	junction_3	5.21416340365355	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAATGTCAGCCCTGGTT	7168	False	NA	NA	False	NA	NA	NA	4697174	4686897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4688949_4689123_4689278_4689553_4689667_4690368_4690513_4696618
tx.23600	chr19	+	3707	3	ISM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	-5	66	-5	-7	intron_retention	FALSE	canonical	3	34	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAACGACCCTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	37423252	37429113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_37423682_37425636_37425816_37426014
tx.23601	chr19	+	3436	22	NNC	ENSMUSG00000053799.9	novel	3543	22	NA	NA	-14	-9	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_1	20.5192238828089	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCAGCTATTCGGAGAT	1855	False	NA	NA	False	NA	NA	NA	37538851	37672498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_37539014_37558942_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
tx.23602	chr19	-	3461	13	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	-11	0	7	0	intron_retention	FALSE	canonical	3	295	junction_2	36.707931325835	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	38212597	38176928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284
tx.23603	chr19	-	5605	23	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-1	2713	intron_retention	FALSE	canonical	3	22	junction_3	19.7447032336554	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9898	False	NA	NA	False	NA	NA	NA	40502185	40280483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
tx.23604	chr19	+	3817	6	NNC	ENSMUSG00000025010.15	novel	3819	6	NA	NA	-36	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	8.01498596380555	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGGTCTTGCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	40819686	40837011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833521_40833649_40834142
tx.23605	chr19	+	6176	6	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	-126	791	intron_retention	FALSE	canonical	1	3	junction_5	36.9918910032996	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGAGTGACTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	41470949	41575766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41570216
tx.23606	chr19	+	2438	3	NNC	ENSMUSG00000090235.2	novel	2327	2	NA	NA	-931	125	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	1	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	42766539	42770018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_42766727_42767671_42767783_42767878
tx.23607	chr19	+	4494	11	NNC	ENSMUSG00000025189.10	novel	5037	11	NA	NA	516	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	3.36005952328229	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGCTGCTTTGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	43429390	43485647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_43430457_43453559_43453704_43456679_43456821_43458047_43458218_43460287_43460388_43460815_43460864_43473308_43473448_43479859_43480044_43480202_43480353_43482148_43482251_43483397
tx.23608	chr19	-	1828	4	NNC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	128.224629286091	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	43663342	43652239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_43653083_43654210_43654268_43655082_43655583_43662914
tx.23609	chr19	+	1991	9	FSM	ENSMUSG00000025192.14	ENSMUST00000144314.2	1829	9	-17	-145	14	145	multi-exon	FALSE	canonical	2	6	junction_1	3.11247489949718	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATGCCATGTCATCA	2790	False	NA	NA	False	NA	NA	NA	43678261	43711158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187
tx.2361	chr11	-	4667	17	FSM	ENSMUSG00000009073.17	ENSMUST00000056290.13	2394	17	-457	-1816	-77	-4	multi-exon	FALSE	canonical	3	247	junction_1	34.4219565648148	420	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	8939	False	NA	NA	False	NA	NA	NA	4799442	4715848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
tx.23610	chr19	+	1321	9	FSM	ENSMUSG00000025193.15	ENSMUST00000112047.10	1233	9	-89	1	13	-1	multi-exon	FALSE	canonical	3	18	junction_1	5.45435605731786	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATAGTCTCAGGTTCTTT	9185	False	NA	NA	False	NA	NA	NA	43741447	43757076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751311_43751446_43753398_43753427_43755639_43755746_43756613
tx.23611	chr19	+	3050	5	ISM	ENSMUSG00000025202.9	ENSMUST00000026220.7	3489	6	12294	-1	12294	1	3prime_fragment	FALSE	canonical	3	12	junction_1	133.013157243936	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGCTCCAGAGTCTT	727	False	NA	NA	False	NA	NA	NA	44204001	44232456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_44204124_44222661_44222793_44224209_44224416_44226814_44227048_44230098
tx.23612	chr19	+	6576	7	NIC	ENSMUSG00000036450.5	novel	6194	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	103	junction_3	12.0749971244533	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTATGTGACTTATTTA	NA	False	NA	NA	False	NA	NA	NA	44551286	44564711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44558396_44558665_44558777_44559552
tx.23613	chr19	+	4259	16	NIC	ENSMUSG00000025207.17	novel	4552	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_15	3.47307100736829	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGTGTCTGCTTGGT	NA	False	NA	NA	False	NA	NA	NA	44977700	44991836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606_44990658_44990785
tx.23614	chr19	+	4370	15	FSM	ENSMUSG00000025207.17	ENSMUST00000026225.15	4548	15	178	0	-12	0	multi-exon	FALSE	canonical	1	6	junction_7	2.98037800643215	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGTGTCTGCTTGGT	NA	False	NA	NA	False	NA	NA	NA	44977717	44991836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606
tx.23615	chr19	-	4198	17	NNC	ENSMUSG00000074818.14	novel	3161	17	NA	NA	-925	-1	intron_retention	FALSE	canonical	0	0	junction_10	6.54670718758675	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGTCTGACTTCA	NA	False	NA	NA	False	NA	NA	NA	45035081	45015345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025648_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
tx.23616	chr19	+	2514	5	FSM	ENSMUSG00000025213.12	ENSMUST00000026234.5	1380	5	-1160	26	-262	-26	multi-exon	FALSE	canonical	1	1	junction_1	1.6583123951777	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATATATAAACA	4695	False	NA	NA	False	NA	NA	NA	45063417	45067702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_45064676_45065102_45065653_45066734_45066896_45066999_45067148_45067305
tx.23617	chr19	-	2577	3	NNC	ENSMUSG00000025216.10	novel	2484	2	NA	NA	-1082	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGCGATCGCATTTGC	NA	False	NA	NA	False	NA	NA	NA	45225333	45221122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_45222697_45223341_45224081_45225069
tx.23618	chr19	-	2389	8	NIC	ENSMUSG00000025221.17	novel	2395	10	NA	NA	-11	-3	intron_retention	TRUE	canonical	3	6	junction_7	7.36234212955721	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	45785494	45780787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45784717_45784772_45785353
tx.23619	chr19	-	2126	11	FSM	ENSMUSG00000025223.16	ENSMUST00000152946.8	2108	11	-18	0	-18	0	multi-exon	FALSE	canonical	3	192	junction_1	177.433255056655	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	6700	False	NA	NA	False	NA	NA	NA	46033671	46021031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
tx.2362	chr11	-	4521	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-66	-4	combination_of_known_junctions	TRUE	canonical	3	63	junction_9	81.0748351147808	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	8950	False	NA	NA	False	NA	NA	NA	4799431	4715848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
tx.23620	chr19	+	6428	40	FSM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	21	1	0	0	multi-exon	FALSE	canonical	3	37	junction_33	16.0207377114128	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	9072	False	NA	NA	False	NA	NA	NA	46140968	46274948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
tx.23621	chr19	+	1127	3	ISM	ENSMUSG00000025226.12	ENSMUST00000177667.2	1243	5	362	3	362	-3	3prime_fragment	FALSE	canonical	3	21	junction_2	5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGCGTGGTGCATAGG	6678	False	NA	NA	False	NA	NA	NA	46316987	46318881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_46317268_46317526_46318033_46318540
tx.23622	chr19	-	3673	17	NIC	ENSMUSG00000025041.18	novel	3728	18	NA	NA	-20	-1	combination_of_known_splicesites	TRUE	canonical	2	12	junction_15	34.4283676638902	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTAAGTCTGAATAATT	7172	False	NA	NA	False	NA	NA	NA	46950767	46875268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46939284_46939405_46950710
tx.23623	chr19	+	6649	2	NIC	ENSMUSG00000006435.17	novel	4158	6	NA	NA	23317	-1	intron_retention	FALSE	canonical	3	114	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGAGGGCTGTGCTGTG	330	False	NA	NA	False	NA	NA	NA	47240666	47247873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_47245298_47245855
tx.23624	chr19	+	1966	4	ISM	ENSMUSG00000025068.9	ENSMUST00000237472.2	1138	6	-16	3825	-8	-3363	5prime_fragment	FALSE	canonical	3	347	junction_3	6.68331255192114	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATGGGTTTAACTCATA	8520	False	NA	NA	False	NA	NA	NA	47843460	47849403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870
tx.23625	chr19	-	2286	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGAGTCTCTTGGTTTGA	5178	False	NA	NA	False	NA	NA	NA	53052911	53038325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr19_-_53040340_53050500_53050648_53052786
tx.23626	chr19	+	6690	14	FSM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	-98	-1700	-98	0	multi-exon	FALSE	canonical	1	3	junction_1	4.75805141359757	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCTGTGTCATGCAG	4643	False	NA	NA	False	NA	NA	NA	53665638	53855511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_53666024_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
tx.23627	chr19	-	5815	10	ISM	ENSMUSG00000024982.11	ENSMUST00000225495.2	1711	11	-28	1403	2	5	5prime_fragment	FALSE	canonical	3	431	junction_5	62.5064934898372	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGTTTTCACCAAAAAG	7447	False	NA	NA	False	NA	NA	NA	55304456	55286746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
tx.23628	chr19	-	6377	16	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-19	-4	intron_retention	FALSE	canonical	2	3	junction_11	16.2693986776812	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGTCTGTTGATGGC	5178	False	NA	NA	False	NA	NA	NA	56810641	56775916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796492_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
tx.23629	chr19	-	5313	7	NIC	ENSMUSG00000025085.17	novel	2164	16	NA	NA	-800	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	26.5267160927746	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGAGTGGCAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	57034174	57021703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312
tx.2363	chr11	-	4621	16	FSM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	95	4	-76	-4	multi-exon	FALSE	canonical	3	105	junction_1	67.5504749551524	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	8940	False	NA	NA	False	NA	NA	NA	4799441	4715848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
tx.23630	chr19	-	3890	7	NNC	ENSMUSG00000025089.16	novel	4415	9	NA	NA	12769	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2.86744175568088	7	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGACATTAAAGATGGC	NA	False	NA	NA	False	NA	NA	NA	58430129	58224049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289022_58429997
tx.23631	chr19	+	4662	8	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	-5	3346	intron_retention	FALSE	canonical	2	13	junction_5	11.9608203936768	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCCTCTTAATCTCCA	NA	False	NA	NA	False	NA	NA	NA	58500447	58544863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
tx.23632	chr19	+	3743	2	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	10673	25285	10673	-25285	internal_fragment	FALSE	canonical	3	35	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATATGGTTTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	58511125	58516175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_58514397_58515703
tx.23633	chr19	+	2583	14	FSM	ENSMUSG00000048029.11	ENSMUST00000200910.4	2567	14	-20	4	-20	0	multi-exon	FALSE	canonical	0	0	junction_6	1.9551176964829	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGCCCTCACAACCATC	NA	False	NA	NA	False	NA	NA	NA	58931836	58959849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_58932054_58933965_58934095_58935083_58935275_58941568_58941724_58943574_58943745_58943849_58943982_58946018_58946073_58947437_58947495_58948554_58948723_58951213_58951340_58952809_58953006_58956933_58957002_58957504_58957623_58959047
tx.23634	chr19	-	2039	4	ISM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-22	7414	-22	-7414	5prime_fragment	FALSE	canonical	3	135	junction_2	6.23609564462324	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTGAGTGTATATACA	NA	False	NA	NA	False	NA	NA	NA	59334234	59293023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_59293753_59303689_59303793_59316182_59316306_59333150
tx.23635	chr19	-	2113	2	ISM	ENSMUSG00000059326.8	ENSMUST00000235483.2	654	6	1764	-1909	29	0	3prime_fragment	FALSE	canonical	3	147	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9900	False	NA	NA	False	NA	NA	NA	61215092	61212839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_61214823_61214962
tx.23636	chr19	-	2683	5	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16460	1719	multi-exon	FALSE	canonical	3	5	junction_4	17.8745629317195	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAAAAATATAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	61301967	61283620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr19_-_61285953_61287055_61287117_61287295_61287423_61288602_61288644_61301845
tx.23637	chr2	+	3670	13	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	-2	1265	intron_retention	FALSE	canonical	1	1	junction_2	9.10433352249844	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTATGATGACATTTT	1000	False	NA	NA	False	NA	NA	NA	3425165	3456394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_3425364_3426400_3426453_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
tx.2364	chr11	+	1890	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	37	-1	-11	1	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	1041	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGGTGTTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	4823987	4844201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
tx.23640	chr2	-	3827	12	NIC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-38	1549	intron_retention	FALSE	canonical	2	9	junction_11	42.3488073929279	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGACTTCTTTTACTCT	NA	False	NA	NA	False	NA	NA	NA	5068900	5023903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5068717
tx.23641	chr2	-	6590	10	ISM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	110262	-5424	110262	-6	3prime_fragment	FALSE	canonical	3	40	junction_3	6.39057948646596	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTGGGTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	5570595	5298273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459
tx.23642	chr2	-	2063	4	FSM	ENSMUSG00000045319.14	ENSMUST00000054254.12	2061	4	2	-4	2	4	multi-exon	FALSE	canonical	1	2	junction_3	15.3260852434302	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCTTGTTAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	6134955	6104831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134706
tx.23643	chr2	+	7641	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	41.2485151247896	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGCGATGCAGCCTTG	4650	False	NA	NA	False	NA	NA	NA	6327473	6451196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6414801_6414960_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
tx.23644	chr2	+	2763	4	ISM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	-42	105	-11	-105	intron_retention	FALSE	canonical	3	38	junction_2	6.23609564462324	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTTATTTTATCTTTG	4783	False	NA	NA	False	NA	NA	NA	10085392	10097512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051
tx.23645	chr2	-	1964	2	NNC	ENSMUSG00000026773.20	novel	4001	12	NA	NA	8268	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGACTCGCTTCTCA	6127	False	NA	NA	False	NA	NA	NA	11478654	11476635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_11477682_11477736
tx.23646	chr2	+	4546	7	NIC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	-132	1	intron_retention	FALSE	canonical	2	5	junction_4	28.0515398666257	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGTTGGCCTATTC	4021	False	NA	NA	False	NA	NA	NA	11782554	11795132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_11783714_11784487_11784635_11786287_11788561_11789101_11789264_11789933_11790072_11791034_11791114_11794544
tx.23647	chr2	+	1306	4	NIC	ENSMUSG00000026730.13	novel	3571	5	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	21.1712593442672	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGTGTTTTCCACTTA	4728	False	NA	NA	False	NA	NA	NA	12928867	13006424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_12929010_12985103_12985370_12999560_12999702_13005667
tx.23648	chr2	+	2256	5	FSM	ENSMUSG00000026730.13	ENSMUST00000134794.8	3571	5	-70	1385	-19	211	multi-exon	FALSE	canonical	2	8	junction_1	18.3490462967425	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTAAAATGCTTAATTGA	4693	False	NA	NA	False	NA	NA	NA	12928832	13006881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999702_13005667
tx.23649	chr2	+	2414	7	NIC	ENSMUSG00000051154.12	novel	935	8	NA	NA	-160	-10	intron_retention	FALSE	canonical	3	388	junction_1	21.7842960766593	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCGGCATTCTGTTTG	7	True	NA	NA	False	NA	NA	NA	18677034	18681031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
tx.2365	chr11	+	2245	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	-9	-1	-9	1	multi-exon	TRUE	canonical	3	228	junction_1	27.0805712775824	262	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTTTGTAGCTCCTTG	NA	False	NA	NA	False	NA	NA	NA	4845333	4878866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
tx.23650	chr2	+	7002	4	ISM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	64884	189	3526	0	3prime_fragment	FALSE	canonical	3	104	junction_1	57.5171472017017	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	20807008	20815335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_20810474_20810585_20812185_20812712_20812836_20813520
tx.23651	chr2	-	7629	24	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	65	7	combination_of_known_junctions	FALSE	canonical	2	15	junction_11	23.6329045547466	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGGGAGCTTACTTGGT	NA	False	NA	NA	False	NA	NA	NA	20973230	20852743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140
tx.23652	chr2	+	1619	2	NNC	ENSMUSG00000075514.5	novel	854	2	NA	NA	-516	351	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTATATTTGTGATT	3093	False	NA	NA	False	NA	NA	NA	20973348	20975159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_20974093_20974284
tx.23653	chr2	-	2506	7	FSM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	-28	-1277	-28	1277	multi-exon	FALSE	canonical	3	131	junction_4	13.2759180473518	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAGATGTCATTAAGG	NA	False	NA	NA	False	NA	NA	NA	23045937	23025418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
tx.23654	chr2	+	4159	16	ISM	ENSMUSG00000026979.17	ENSMUST00000166388.2	4181	17	7884	-550	-6535	21	3prime_fragment	FALSE	canonical	2	7	junction_4	4.71404520791032	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCACTTACTGTGTTTTT	7242	False	NA	NA	False	NA	NA	NA	24284512	24298762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
tx.23655	chr2	-	1648	8	NNC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.7559516653499	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9355	False	NA	NA	False	NA	NA	NA	24825226	24815363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_24815709_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
tx.23656	chr2	-	2343	5	NIC	ENSMUSG00000026972.16	novel	1590	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	76	junction_4	3.96074487943871	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	9362	False	NA	NA	False	NA	NA	NA	24825219	24815366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_24815689_24815767_24816740_24816889_24817045_24817137_24817852_24825039
tx.23657	chr2	+	5487	36	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-817	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	10.0369114690095	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTACTCTG	NA	False	NA	NA	False	NA	NA	NA	24865227	24944069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_24866326_24868137_24868234_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
tx.23658	chr2	-	2617	11	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	170	junction_5	16.1124175715502	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	NA	False	NA	NA	NA	25145394	25137240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25137867_25137971_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
tx.23659	chr2	+	2878	3	NIC	ENSMUSG00000048707.10	novel	2787	4	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	142	junction_1	10	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTTTTGCCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	25152624	25159896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_25154566_25158843_25159252_25159367
tx.2366	chr11	-	3926	4	FSM	ENSMUSG00000020396.9	ENSMUST00000093369.5	3994	4	68	0	68	0	multi-exon	FALSE	canonical	3	23	junction_2	3.09120616516523	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTGTTTTTACTTGT	NA	False	NA	NA	False	NA	NA	NA	4897996	4888753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_4891416_4893850_4893976_4895110_4895311_4897057
tx.23660	chr2	-	3505	17	ISM	ENSMUSG00000026959.14	ENSMUST00000114308.10	4165	20	7572	-1	-6126	1	3prime_fragment	FALSE	canonical	1	3	junction_1	6.67990222608086	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGGTTTTGTCTATTGT	9866	False	NA	NA	False	NA	NA	NA	25201535	25181191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_25182497_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
tx.23661	chr2	-	3289	18	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7542	0	-6156	0	3prime_fragment	FALSE	canonical	0	0	junction_1	7.78428903043448	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	9836	False	NA	NA	False	NA	NA	NA	25201565	25181192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_25182141_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
tx.23662	chr2	-	3501	6	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7545	9879	-6153	2421	internal_fragment	FALSE	canonical	3	22	junction_5	4.58693797647189	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9839	False	NA	NA	False	NA	NA	NA	25201562	25191071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
tx.23663	chr2	+	2429	6	ISM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	40	729	1	681	intron_retention	FALSE	canonical	3	90	junction_3	9.97196068985433	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCACGTCTGCATCTT	6697	False	NA	NA	False	NA	NA	NA	25262372	25267496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175
tx.23664	chr2	+	2331	5	ISM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	28	-682	-2	682	intron_retention	FALSE	canonical	3	11	junction_1	43.0290599479003	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACGTCTGCATCTTT	6694	False	NA	NA	False	NA	NA	NA	25262369	25267497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175
tx.23665	chr2	+	1899	9	FSM	ENSMUSG00000015085.9	ENSMUST00000028328.3	1935	9	33	3	-9	-3	multi-exon	FALSE	canonical	1	2	junction_1	1.69096865730859	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAAGTGTCCATAGGG	NA	False	NA	NA	False	NA	NA	NA	25285918	25291330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_25286102_25287407_25287526_25288012_25288164_25288302_25288463_25288543_25288772_25289293_25289549_25289628_25289749_25290575_25290711_25290781
tx.23666	chr2	-	1251	7	FSM	ENSMUSG00000015083.12	ENSMUST00000040042.11	1150	7	-102	1	-102	-1	multi-exon	FALSE	canonical	3	9	junction_1	2.38047614284762	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTTTGTCGTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	25390727	25388663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_25388836_25388916_25388956_25389025_25389128_25389409_25389518_25389600_25389672_25389850_25389988_25390105
tx.23667	chr2	+	189	2	Antisense	novelGene_ENSMUSG00000083528.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTTAAAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	25419686	25445759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_+_25419833_25445716
tx.23668	chr2	-	4519	13	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	-1	0	intron_retention	FALSE	canonical	3	286	junction_7	25.0747493617694	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	3273	False	NA	NA	False	NA	NA	NA	25498478	25473029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25474001_25474114_25474174_25474787_25475549_25475635_25475846_25476879_25477031_25477286_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
tx.2367	chr11	+	3787	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	86	212	-2	-150	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	549	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	NA	False	NA	NA	NA	4936909	4992579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
tx.23670	chr2	+	2010	4	FSM	ENSMUSG00000026930.16	ENSMUST00000147873.8	977	4	-74	-959	-74	-3	multi-exon	FALSE	canonical	2	4	junction_1	7.25718035235908	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGGCTTCTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	26232226	26238246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_26232443_26234613_26234771_26235162_26235372_26236818
tx.23671	chr2	-	2825	2	ISM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	429	-40	419	40	3prime_fragment	FALSE	canonical	3	362	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTATCTGTTTCTGCT	NA	False	NA	NA	False	NA	NA	NA	26241693	26238092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26240571_26241346
tx.23672	chr2	-	2909	3	NNC	ENSMUSG00000075467.5	novel	2916	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	135.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCGGGGCGGCCACCAT	NA	False	NA	NA	False	NA	NA	NA	26242111	26238132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_26240571_26241346_26241491_26241784
tx.23673	chr2	-	1099	9	ISM	ENSMUSG00000026928.15	ENSMUST00000100303.10	1947	12	2112	12	2112	-1	3prime_fragment	FALSE	canonical	3	13	junction_2	6.02987354759617	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTGGTTGGATATGC	NA	False	NA	NA	False	NA	NA	NA	26247647	26242199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26242424_26242496_26242574_26242952_26243027_26244368_26244418_26244841_26244884_26245344_26245537_26246769_26246896_26247196_26247341_26247476
tx.23674	chr2	-	3249	7	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	146	junction_6	81.7414623472486	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	26279314	26272813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26278503_26278573_26279160
tx.23675	chr2	-	7209	29	ISM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	4529	3	-932	-3	3prime_fragment	FALSE	canonical	3	97	junction_2	23.3889855029487	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTTATGGCTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	26330699	26299447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398
tx.23676	chr2	-	3772	5	ISM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	38857	4	1198	-4	3prime_fragment	FALSE	canonical	3	49	junction_3	3.08220700148449	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTGGAGTGTGGTTTG	5916	False	NA	NA	False	NA	NA	NA	26354977	26347918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817
tx.23677	chr2	+	3421	2	NIC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	4	1	intron_retention	FALSE	canonical	3	245	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCCAAACCAATATGTG	NA	False	NA	NA	False	NA	NA	NA	26806396	26810185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_26809371_26809738
tx.23678	chr2	-	5290	27	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.6363518282805	3	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTTAGCCTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	27317113	27152115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_27154224_27157241_27157397_27158162_27158250_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
tx.23679	chr2	-	5270	13	NIC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	4	-4	intron_retention	TRUE	canonical	2	3	junction_11	99.0992768221175	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGTGTCTGTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	27365661	27335594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27362587_27362627_27365588
tx.2368	chr11	-	2826	7	FSM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	15	6	-12	3	multi-exon	FALSE	canonical	3	21	junction_5	62.4357447478784	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTTGCATTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	5015312	5010377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5014836_5015095_5015214
tx.23680	chr2	+	2171	8	ISM	ENSMUSG00000015846.16	ENSMUST00000238913.2	1631	10	15282	-509	300	14	3prime_fragment	FALSE	canonical	3	73	junction_2	8.39825054668518	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGAGATATCACTCCA	5315	False	NA	NA	False	NA	NA	NA	27630512	27650209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
tx.23681	chr2	+	4687	58	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	66551	1989	-64465	96	3prime_fragment	FALSE	canonical	2	10	junction_5	12.4369013765902	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAGTAAATATTTGTA	NA	False	NA	NA	False	NA	NA	NA	27842987	27927537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
tx.23682	chr2	+	3574	37	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	102713	1958	-28303	127	3prime_fragment	FALSE	canonical	3	23	junction_1	10.2400207368617	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTAAGTGTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	27879149	27927568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
tx.23683	chr2	+	3221	5	ISM	ENSMUSG00000026837.17	ENSMUST00000145423.2	1049	7	7255	-2494	2410	-5	3prime_fragment	FALSE	canonical	3	32	junction_3	5.16599457994296	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTGACTAGCTGTCT	2817	False	NA	NA	False	NA	NA	NA	27914707	27929521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
tx.23684	chr2	+	2828	6	FSM	ENSMUSG00000026833.19	ENSMUST00000100244.10	2686	6	-145	3	-44	-3	multi-exon	FALSE	canonical	2	4	junction_1	17.749366185867	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCGATTTGCTTATTG	6450	False	NA	NA	False	NA	NA	NA	28082959	28120745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_28083475_28098089_28098240_28102543_28102700_28104620_28104841_28112562_28112670_28119065
tx.23685	chr2	+	5336	3	NIC	ENSMUSG00000035829.14	novel	646	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	28336877	28345520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_28336909_28337896_28337995_28340313
tx.23686	chr2	+	6609	2	NIC	ENSMUSG00000035829.14	novel	5466	3	NA	NA	-219	0	intron_retention	FALSE	canonical	3	12	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	28336592	28345520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_28337995_28340313
tx.23687	chr2	-	3423	4	FSM	ENSMUSG00000079497.5	ENSMUST00000129574.3	1091	4	-449	-1883	-449	1883	multi-exon	TRUE	canonical	3	10	junction_3	6.12825877028341	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCACTTTTTTAAGTTGA	NA	False	NA	NA	False	NA	NA	NA	29642146	29633047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_29635352_29636461_29636606_29637219_29637663_29641614
tx.23688	chr2	+	1797	2	NIC	ENSMUSG00000015337.6	novel	1063	3	NA	NA	15	-26	intron_retention	FALSE	canonical	3	384	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGACCATCTCTACT	NA	False	NA	NA	False	NA	NA	NA	30061519	30064055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_30062964_30063702
tx.23689	chr2	+	3930	2	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	17624	0	17624	0	3prime_fragment	FALSE	canonical	3	48	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	NA	False	NA	NA	NA	30145357	30153802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_30147345_30151859
tx.2369	chr11	-	2575	6	FSM	ENSMUSG00000034201.14	ENSMUST00000109895.2	2530	6	-41	-4	9	4	multi-exon	FALSE	canonical	3	85	junction_5	36.2049720342386	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGCATTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	5015318	5010376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
tx.23690	chr2	-	1767	11	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	106.599671669288	5	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	NA	False	NA	NA	NA	30249281	30234820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240295_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.23691	chr2	+	4120	13	NIC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	618	-1	intron_retention	FALSE	canonical	3	43	junction_4	6.74691287429542	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTCTGTGTCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	30259044	30275530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
tx.23692	chr2	+	2262	7	NIC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	287	junction_5	28.1706111636459	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	NA	False	NA	NA	NA	30282431	30290539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286543_30287030_30287160_30287479_30287570_30289153
tx.23693	chr2	-	1418	7	FSM	ENSMUSG00000044320.15	ENSMUST00000050003.9	1672	7	-8	262	-8	0	multi-exon	FALSE	canonical	3	15	junction_6	6.6248689714506	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTGCCTGATTGGGG	NA	False	NA	NA	False	NA	NA	NA	30691727	30685574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
tx.23694	chr2	+	3548	4	FSM	ENSMUSG00000026848.15	ENSMUST00000155213.8	1324	4	-197	-2027	-4	0	multi-exon	FALSE	canonical	1	21	junction_1	37.4788829431544	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCTGAGCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	30842986	30849024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_30844030_30845789_30845966_30846459_30846588_30846823
tx.23695	chr2	-	4589	4	NIC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	466	junction_1	30.5759527879163	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGTGGCTTTGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	30857914	30850639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_30851210_30853486_30853615_30853705_30857368_30857685
tx.23696	chr2	+	4058	24	NNC	ENSMUSG00000026854.17	novel	430	6	NA	NA	184	-939	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.5407661236074	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTACTGTGACACTG	NA	False	NA	NA	False	NA	NA	NA	30886243	30912655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_30886377_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
tx.23697	chr2	-	5416	15	NIC	ENSMUSG00000075415.14	novel	1859	15	NA	NA	2	-1421	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	41.01424590733	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTGTATTTTAAGTG	4770	False	NA	NA	False	NA	NA	NA	31032018	30919627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943150_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
tx.23698	chr2	+	7543	10	ISM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	39	690	39	-4	intron_retention	FALSE	canonical	3	93	junction_1	31.7245085768786	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	31649993	31693549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574
tx.23699	chr2	+	6599	36	FSM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	6	0	6	0	multi-exon	FALSE	canonical	3	26	junction_30	27.3468425219141	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	NA	False	NA	NA	NA	31864453	31942383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929334_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
tx.237	chr1	+	4683	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	-6	-28	-6	-1	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAATTGGTCTTAATT	3298	False	NA	NA	False	NA	NA	NA	43973160	44042159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
tx.2370	chr11	-	3190	6	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	10	4	intron_retention	FALSE	canonical	3	54	junction_5	47.3894503027836	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGCATTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	5015317	5010376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
tx.23700	chr2	+	4449	5	ISM	ENSMUSG00000039262.17	ENSMUST00000132459.8	4837	29	40751	-3374	4209	-1	3prime_fragment	FALSE	canonical	3	239	junction_3	129.855689132206	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	32113988	32124548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
tx.23701	chr2	+	4224	4	ISM	ENSMUSG00000039262.17	ENSMUST00000132459.8	4837	29	43035	-3372	6493	-3	3prime_fragment	FALSE	canonical	3	239	junction_2	128.463570279239	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	32116272	32124546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_32116399_32116956_32117049_32119274_32119357_32120622
tx.23702	chr2	+	4001	5	FSM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	-556	-619	-26	-4	multi-exon	FALSE	canonical	3	25	junction_3	5.71729831301464	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCTGTCAACCACTTCC	NA	False	NA	NA	False	NA	NA	NA	32477080	32489706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
tx.23703	chr2	+	5728	4	NIC	ENSMUSG00000079442.13	novel	3626	6	NA	NA	14	0	intron_retention	FALSE	canonical	3	25	junction_2	5.79271573232759	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCAACCACTTCCTCCA	NA	False	NA	NA	False	NA	NA	NA	32477120	32489710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_32479643_32484001_32484415_32485705_32485814_32487025
tx.23704	chr2	+	2370	6	FSM	ENSMUSG00000026811.19	ENSMUST00000113290.8	2402	6	32	0	-18	0	multi-exon	FALSE	canonical	3	16	junction_1	35.6202189774291	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	3336	False	NA	NA	False	NA	NA	NA	32497004	32510816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32497124_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
tx.23705	chr2	+	1158	4	FSM	ENSMUSG00000053746.9	ENSMUST00000138214.2	908	4	-105	-145	-26	-3	multi-exon	FALSE	canonical	3	42	junction_3	3.85861230093008	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGGAAGCTTCCTGTGG	8165	False	NA	NA	False	NA	NA	NA	32665771	32667606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32665908_32666315_32666819_32666994_32667041_32667133
tx.23706	chr2	-	2750	3	ISM	ENSMUSG00000026792.17	ENSMUST00000028132.14	3981	25	31685	1	9229	-1	3prime_fragment	FALSE	canonical	3	27	junction_1	1	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGTTTGCATAGATTC	9825	False	NA	NA	False	NA	NA	NA	32819582	32815228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_32816914_32817996_32818143_32818663
tx.23708	chr2	-	2796	7	NIC	ENSMUSG00000026791.15	novel	1339	9	NA	NA	13	19	intron_retention	FALSE	canonical	3	169	junction_5	8.47381587925744	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTTGCAGGTCCCTT	3977	False	NA	NA	False	NA	NA	NA	32872067	32862982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32863745_32864849_32864996_32865325_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
tx.23709	chr2	-	2236	9	NIC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	13	2	intron_retention	FALSE	canonical	3	167	junction_4	8.8175960442742	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAGTGGAGCCAGAAG	3977	False	NA	NA	False	NA	NA	NA	32872067	32862999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
tx.2371	chr11	-	3310	5	ISM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	10	5	10	4	intron_retention	FALSE	canonical	3	136	junction_3	19.9546360528074	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGCATTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	5015317	5010376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825
tx.23710	chr2	+	3274	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	64.6092872581024	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	NA	NA	NA	34296859	34514962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
tx.23711	chr2	-	3661	14	ISM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	2223	-5	2223	5	3prime_fragment	FALSE	canonical	3	18	junction_3	3.95836317854419	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTCCTTGGAGCTGGCT	5910	False	NA	NA	False	NA	NA	NA	34801765	34783763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628
tx.23712	chr2	-	3804	15	NIC	ENSMUSG00000026873.10	novel	3741	15	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	6.44125732434028	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAAGCGTGTCCTTGGA	3625	False	NA	NA	False	NA	NA	NA	34804050	34783770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801818_34803952
tx.23713	chr2	+	3533	11	FSM	ENSMUSG00000057110.16	ENSMUST00000028235.11	2734	11	23	-822	23	822	multi-exon	FALSE	canonical	3	34	junction_10	5.89576118919347	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCCTGTTTTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34999526	35021561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632
tx.23714	chr2	-	9023	22	FSM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-75	0	-75	0	multi-exon	TRUE	canonical	0	0	junction_20	12.7563953992798	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTCTTAGTGTCAAT	NA	False	NA	NA	False	NA	NA	NA	37312990	37260080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_37265441_37266672_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
tx.23715	chr2	-	4926	2	FSM	ENSMUSG00000050714.10	ENSMUST00000102789.3	2047	2	-29	-2850	-14	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTGTCATTGACTTC	NA	False	NA	NA	False	NA	NA	NA	37333161	37322179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_37327012_37333067
tx.23716	chr2	+	2594	11	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	-3	-762	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	115.413560728365	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAATTTTATAGCTGG	NA	False	NA	NA	False	NA	NA	NA	38401651	38476730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_38401806_38413962_38414104_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
tx.23717	chr2	-	6121	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	22.851914580621	54	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATCTGTCTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	38816412	38613385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
tx.23718	chr2	-	4236	21	NIC	ENSMUSG00000026754.17	novel	2894	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	34	junction_8	7.86940277276491	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAGCTTCAAGTCT	NA	False	NA	NA	False	NA	NA	NA	38955556	38907664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
tx.23719	chr2	-	2435	18	FSM	ENSMUSG00000035236.18	ENSMUST00000038874.12	10709	18	10	8264	4	287	multi-exon	FALSE	canonical	2	5	junction_4	3.37403068228235	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTATTTAGAATTGTT	NA	False	NA	NA	False	NA	NA	NA	39080736	38964489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_38965169_38970088_38970190_38970385_38970560_38973549_38973623_38984714_38984797_38989387_38989488_38992332_38992412_38993214_38993317_38993675_38993778_38996931_38997085_38997219_38997319_38998318_38998416_39011122_39011222_39013015_39013103_39015101_39015198_39022966_39023099_39080000_39080046_39080601
tx.2372	chr11	-	2395	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	192	1	-7	-1	multi-exon	FALSE	canonical	3	2776	junction_9	796.06296616144	4561	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	5049074	5019689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
tx.23720	chr2	-	4088	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	-28	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	127.896315254277	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAAAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	48839242	48792863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819596_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
tx.23721	chr2	+	4670	14	FSM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	19	8	19	-8	multi-exon	FALSE	canonical	2	3	junction_1	7.11943751517944	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGCCTTATGTGATATA	NA	False	NA	NA	False	NA	NA	NA	49341516	49441952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
tx.23722	chr2	+	4228	13	ISM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	37200	-1	37200	1	3prime_fragment	FALSE	canonical	2	9	junction_1	6.11634876558084	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGATATATGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	49378697	49441961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
tx.23723	chr2	+	2679	9	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	81074	34334	-207	4860	internal_fragment	FALSE	canonical	3	18	junction_8	5.02493781056044	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGATGATGTTATTATT	NA	False	NA	NA	False	NA	NA	NA	49590383	49630456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094
tx.23724	chr2	+	3168	5	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	-304	-80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	250.515967554964	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTATTTTATCTCCT	NA	False	NA	NA	False	NA	NA	NA	53081433	53109152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_53082535_53084295_53084350_53092930_53093064_53098950_53098985_53107306
tx.23725	chr2	-	3556	8	FSM	ENSMUSG00000026826.14	ENSMUST00000112629.8	3422	8	-137	3	-137	-3	multi-exon	FALSE	canonical	1	2	junction_5	1.27775312999988	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTGTCTTATTTCTGG	NA	False	NA	NA	False	NA	NA	NA	57014152	56996844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_56998425_56998572_56998752_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57013840
tx.23726	chr2	-	1989	5	ISM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	47611	4	47611	3	3prime_fragment	FALSE	canonical	3	41	junction_1	10.4253297309965	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	58358673	58336449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525
tx.23727	chr2	+	4223	13	ISM	ENSMUSG00000026991.21	ENSMUST00000112577.8	4222	21	87307	4	-5560	-3	3prime_fragment	FALSE	canonical	1	21	junction_8	19.9393176635734	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	NA	False	NA	NA	NA	59147399	59185545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
tx.23728	chr2	-	2071	11	FSM	ENSMUSG00000026988.16	ENSMUST00000028368.14	2072	11	1	0	1	0	multi-exon	FALSE	canonical	3	14	junction_10	21.0228447171167	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	59712927	59682707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
tx.23729	chr2	-	3594	5	NIC	ENSMUSG00000060703.13	novel	1354	6	NA	NA	268	-1	intron_retention	FALSE	canonical	3	68	junction_1	7.08872343937891	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCACTGCCTGGTCTTCT	4270	False	NA	NA	False	NA	NA	NA	60114494	60082337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
tx.2373	chr11	+	1805	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	72.0831767821036	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	5049366	5056093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_5049478_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
tx.23730	chr2	-	2462	14	FSM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	-41	2015	-41	-255	multi-exon	FALSE	canonical	3	25	junction_13	80.5716264093541	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAGTAGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	60793577	60582551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
tx.23731	chr2	-	1999	14	FSM	ENSMUSG00000026888.15	ENSMUST00000028252.14	1986	14	-13	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_8	3.05182068075037	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCGTGTTCTTGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	64853139	64742819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_64743198_64745059_64745154_64747172_64747261_64747378_64747452_64747542_64747660_64753880_64753962_64760243_64760340_64760529_64760641_64763563_64763702_64766760_64766836_64768712_64768835_64783905_64784063_64851430_64851564_64852803
tx.23732	chr2	-	5132	14	FSM	ENSMUSG00000034903.19	ENSMUST00000112429.9	5045	14	-95	8	0	3	multi-exon	FALSE	canonical	0	0	junction_10	1.27794213275663	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTCCCGTGTAGCCT	NA	False	NA	NA	False	NA	NA	NA	65069065	64918690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_64919902_64926031_64926209_64927976_64929737_64932412_64932511_64933503_64933739_64936058_64936173_64937355_64937431_64938101_64938262_64956236_64956462_64956551_64956650_64963922_64964152_64966688_64966891_64981322_64981512_65068706
tx.23733	chr2	-	3167	17	NIC	ENSMUSG00000027030.16	novel	3536	18	NA	NA	-63	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	14.1287329138179	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCGAGTCTCCTCCATTT	NA	False	NA	NA	False	NA	NA	NA	68302347	68040790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
tx.23734	chr2	-	2196	17	NIC	ENSMUSG00000027030.16	novel	3536	18	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	14.5768437941826	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAGCACTCCGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	68302630	68042083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
tx.23735	chr2	+	6059	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-20	-9	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	112.037289179392	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAATTTGGGATTGT	NA	False	NA	NA	False	NA	NA	NA	69553177	69584347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
tx.23736	chr2	+	1979	10	ISM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	8	78707	8	5	5prime_fragment	FALSE	canonical	3	86	junction_2	13.3231442549987	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTTTTGAACAGTTGTT	4334	False	NA	NA	False	NA	NA	NA	69727597	69775650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357
tx.23737	chr2	-	3243	13	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-59	-14204	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	72.7230286009108	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGCTAGTCATTGTAA	NA	False	NA	NA	False	NA	NA	NA	70656131	70560859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_70562411_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
tx.23738	chr2	-	4942	17	FSM	ENSMUSG00000041762.17	ENSMUST00000076463.12	5061	17	118	1	-11	-1	multi-exon	FALSE	canonical	0	0	junction_10	2.09165006633519	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGACAGCTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	73216798	73171850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_73174102_73178480_73178619_73179970_73180036_73182192_73182289_73183960_73184098_73186941_73187047_73192768_73192980_73194275_73194367_73194511_73194597_73197824_73197943_73198657_73198742_73200329_73200486_73201308_73201475_73203958_73204359_73212167_73212653_73213138_73213303_73216608
tx.23739	chr2	+	379	2	Antisense	novelGene_ENSMUSG00000027107.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCCCCCAATTTC	NA	False	NA	NA	False	NA	NA	NA	73391304	73395718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_+_73391509_73395543
tx.2374	chr11	+	1873	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	462	-2	-45	0	multi-exon	FALSE	canonical	3	72	junction_2	51.4605431374369	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	5049387	5056093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
tx.23740	chr2	-	2824	3	FSM	ENSMUSG00000018770.10	ENSMUST00000155474.2	770	3	-1183	-871	-1148	0	multi-exon	FALSE	canonical	3	2058	junction_2	1124.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	NA	False	NA	NA	NA	73742818	73738790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_73740286_73741298_73741405_73741595
tx.23741	chr2	-	2499	2	Genic_Genomic	ENSMUSG00000082152.2	novel	745	1	NA	NA	-154	1803	multi-exon	FALSE	canonical	2	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGTAAACATTTCTT	3938	False	NA	NA	False	NA	NA	NA	75463880	75461178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_-_75463597_75463799
tx.23742	chr2	-	635	3	NIC	ENSMUSG00000056436.5	novel	655	4	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	94.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTGCGTTATGTTTATG	NA	False	NA	NA	False	NA	NA	NA	76190804	76184286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_76184581_76186423_76186617_76190656
tx.23743	chr2	+	3795	24	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	7	-26	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	9.67955380246139	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTGTGCTCATAGGTG	NA	False	NA	NA	False	NA	NA	NA	76236858	76426914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
tx.23744	chr2	+	2357	17	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.2259796528383	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGTTCTCAGAGTTGTC	NA	False	NA	NA	False	NA	NA	NA	76236859	76410377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_76237034_76237864_76237950_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
tx.23745	chr2	-	5705	23	FSM	ENSMUSG00000044033.17	ENSMUST00000049544.14	8969	23	14	3250	-4	-1605	multi-exon	FALSE	canonical	3	17	junction_11	5.83396297270922	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATGTTGTCTGAGGTG	NA	False	NA	NA	False	NA	NA	NA	77000965	76843495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
tx.23746	chr2	-	3129	19	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-231	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	35.8255805566668	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTGGTAGTTACGT	NA	False	NA	NA	False	NA	NA	NA	77111167	77016892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77076516_77076689_77110898
tx.23747	chr2	-	5334	2	Antisense	novelGene_ENSMUSG00000048388.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATCCGTAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	83701455	83696068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_83696294_83696346
tx.23749	chr2	-	605	3	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6963	-6	6963	6	3prime_fragment	FALSE	canonical	3	139	junction_1	1.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAGTTTGCCAGGTCT	4732	False	NA	NA	False	NA	NA	NA	84646033	84641513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_84641884_84645634_84645787_84645950
tx.2375	chr11	-	1945	15	FSM	ENSMUSG00000034164.18	ENSMUST00000062821.13	1947	15	2	0	2	0	multi-exon	TRUE	canonical	3	8	junction_2	4.11815294439988	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCTTGGTCTCTATGTG	7864	False	NA	NA	False	NA	NA	NA	5102255	5056264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5056970_5060689_5060775_5066879_5066925_5078869_5078915_5079008_5079072_5079427_5079481_5079621_5079721_5080631_5080779_5081481_5081572_5081919_5082041_5084348_5084411_5085353_5085432_5093826_5093931_5094294_5094409_5102121
tx.23750	chr2	-	3698	13	NIC	ENSMUSG00000027071.15	novel	1812	12	NA	NA	42	1898	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	7.59751421336099	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTGTGGTTTACTC	NA	False	NA	NA	False	NA	NA	NA	84863612	84827028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84862864_84862892_84863344
tx.23751	chr2	-	1556	2	ISM	ENSMUSG00000025839.4	ENSMUST00000026957.4	1861	3	1040	-6	1040	6	3prime_fragment	FALSE	canonical	3	30	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	87321722	87319424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_87320426_87321167
tx.23752	chr2	+	483	2	Genic_Genomic	ENSMUSG00000082908.5	novel	253	1	NA	NA	-86	227	multi-exon	FALSE	canonical	3	135	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATGTTGGGCAAATATA	NA	False	NA	NA	False	NA	NA	NA	87356402	87356968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_+_87356560_87356642
tx.23754	chr2	+	4648	15	NIC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	27	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	239.576624869108	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2405	False	NA	NA	False	NA	NA	NA	90770829	90849840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
tx.23755	chr2	-	6048	33	NNC	ENSMUSG00000040687.17	novel	5974	36	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_13	5.50816155808814	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCTCCTGTGCACTC	NA	False	NA	NA	False	NA	NA	NA	91013371	90967705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988873_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
tx.23756	chr2	-	2033	7	NIC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	5	-7	intron_retention	FALSE	canonical	1	4	junction_3	44.2555708985384	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAGCCCAACAGGGTT	3024	False	NA	NA	False	NA	NA	NA	91067300	91041923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047397_91047576_91047651_91047752_91064452_91065297_91067034
tx.23757	chr2	+	602	2	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAGAAAATCTGGCATG	NA	False	NA	NA	False	NA	NA	NA	91067483	91068405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_91067747_91068066
tx.23758	chr2	+	4104	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	6	22	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	21	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGACTGCTCTTGTGGG	3379	False	NA	NA	False	NA	NA	NA	91541203	91551912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_91541597_91542424_91543211_91548987
tx.23759	chr2	-	2021	10	ISM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	28915	0	28915	0	3prime_fragment	FALSE	canonical	3	8	junction_9	4.13058451009802	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGACTCTGTGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	91825932	91812672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601
tx.2376	chr11	-	4898	9	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	18.1379264250355	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGAGGCCAGGCTGT	NA	False	NA	NA	False	NA	NA	NA	5211651	5141551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_5145122_5148309_5148395_5149552_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
tx.23760	chr2	+	4267	19	NIC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-292	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	5.97964654804163	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAAAACGCTGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	92014158	92192171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_92014698_92044393_92044435_92045793_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
tx.23761	chr2	-	190	2	Antisense	novelGene_ENSMUSG00000083951.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	179	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	92112198	92037678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_92037819_92112148
tx.23762	chr2	-	3766	12	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	27.7646543839078	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	False	NA	NA	False	NA	NA	NA	92264401	92233990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92244203_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
tx.23763	chr2	-	2989	15	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	155.373562350713	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	NA	False	NA	NA	NA	93652911	93525975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93652731
tx.23764	chr2	-	2982	15	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	154.502162985982	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	NA	False	NA	NA	NA	93652911	93525977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650379_93650495_93652731
tx.23765	chr2	-	2300	3	ISM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	12692	-4	7149	4	3prime_fragment	FALSE	canonical	3	131	junction_2	17	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTTGATCCAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	93828383	93810977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_93811323_93811860_93811960_93826527
tx.23766	chr2	-	4399	9	FSM	ENSMUSG00000032841.16	ENSMUST00000171088.8	4296	9	-14	-89	12	89	multi-exon	TRUE	canonical	0	0	junction_8	2.72717802865893	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCACACTGTCTGTGTG	964	False	NA	NA	False	NA	NA	NA	101628066	101544540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_101547812_101559768_101559896_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474_101602754_101627765
tx.23767	chr2	-	4203	9	FSM	ENSMUSG00000032841.16	ENSMUST00000043845.14	2290	9	45	-1958	-13	2	multi-exon	FALSE	canonical	1	4	junction_4	1.6583123951777	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTGCTGTACAGAATGC	1022	False	NA	NA	False	NA	NA	NA	101628008	101544627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_101547812_101559768_101559896_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474_101602754_101627816
tx.23768	chr2	+	1789	5	FSM	ENSMUSG00000032679.13	ENSMUST00000168176.8	1806	5	22	-5	-17	0	multi-exon	FALSE	canonical	3	25	junction_1	94.0063162771524	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTATCTTGACTCTCT	NA	False	NA	NA	False	NA	NA	NA	103926167	103945699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_103926273_103928069_103928190_103934515_103934595_103941084_103941190_103944319
tx.23769	chr2	-	7571	16	FSM	ENSMUSG00000084516.3_ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	-146	-3300	118	0	multi-exon	FALSE	canonical	2	5	junction_15	13.0833227176178	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGCTGGCTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	104324181	104256825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104323565
tx.2377	chr11	-	4946	9	FSM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	-90	0	-90	0	multi-exon	FALSE	canonical	3	45	junction_1	7.36121593216773	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGAGGCCAGGCTGT	NA	False	NA	NA	False	NA	NA	NA	5211648	5141551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
tx.23770	chr2	-	8295	10	ISM	ENSMUSG00000074994.7	ENSMUST00000117237.2	8973	12	26965	8	26965	-8	3prime_fragment	FALSE	canonical	3	14	junction_3	35.5996254661946	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAATCAGAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	104620076	104585147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104600387_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864
tx.23771	chr2	+	4642	17	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	12	749	intron_retention	FALSE	canonical	2	3	junction_6	14.7563545633737	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAGGTTATGTAATT	NA	False	NA	NA	False	NA	NA	NA	104716680	104830831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
tx.23772	chr2	+	2951	9	FSM	ENSMUSG00000016458.16	ENSMUST00000133470.8	1220	9	-384	-1347	88	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCAGGAGTCTTTTGG	NA	False	NA	NA	False	NA	NA	NA	104956961	105003957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000364_105002567
tx.23773	chr2	-	1454	4	NNC	ENSMUSG00000057234.10	novel	1894	6	NA	NA	113613	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	19.09624744987	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	108995012	108922643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_108923643_108961829_108962009_108967685_108967878_108994928
tx.23774	chr2	-	1813	6	NIC	ENSMUSG00000057234.10	novel	2018	7	NA	NA	74	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	18.3891272223561	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	109110973	108922644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109110953
tx.23775	chr2	+	1857	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111045.9	3973	2	7	2109	7	-2109	multi-exon	FALSE	canonical	2	4	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAATGCTCACACTC	NA	False	NA	NA	False	NA	NA	NA	109523914	109555243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_109524255_109553726
tx.23776	chr2	+	4888	17	ISM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	57353	-3	-5065	3	3prime_fragment	FALSE	canonical	3	78	junction_3	9.51232752800281	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	NA	NA	NA	112172274	112193504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
tx.23777	chr2	+	2743	9	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	170.123806020792	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTGGTGTGCATAG	NA	False	NA	NA	False	NA	NA	NA	112209576	112244582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
tx.23778	chr2	+	2658	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-22	-180	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	116.630234374488	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTAAGTTACCAGTTT	NA	False	NA	NA	False	NA	NA	NA	115412174	115609069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_115412467_115434047_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
tx.23779	chr2	+	4315	7	NNC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-340	-1998	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.6132478096764	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTTTTTTTTTAACC	NA	False	NA	NA	False	NA	NA	NA	116951514	117010762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_116952195_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
tx.2378	chr11	-	4418	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	-1	-662	intron_retention	FALSE	canonical	3	35	junction_3	4.75093975666168	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGTCTCCCTGGAG	6431	False	NA	NA	False	NA	NA	NA	5394848	5229263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
tx.23780	chr2	-	3201	5	FSM	ENSMUSG00000040093.17	ENSMUST00000090219.13	4642	5	-30	1471	-30	4	multi-exon	FALSE	canonical	2	4	junction_1	1.11803398874989	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTCTTGGAGGCAGCTG	NA	False	NA	NA	False	NA	NA	NA	118380198	118360708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_118363141_118375562_118375727_118377196_118377494_118379521_118379652_118380020
tx.23781	chr2	+	4642	7	NNC	ENSMUSG00000040007.9	novel	4594	7	NA	NA	-61	-4	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_5	12.1609575646365	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTATTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	118731872	118755005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_118732239_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752085_118752178_118752863
tx.23782	chr2	-	1876	4	NIC	ENSMUSG00000039983.14	novel	1870	4	NA	NA	-6	7	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	18.6726180988812	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGATTTTCTGATTTTC	NA	False	NA	NA	False	NA	NA	NA	118859864	118848252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_118849646_118852549_118852707_118857618_118857869_118859788
tx.23783	chr2	+	2928	10	NIC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	80	junction_9	12.9995251575197	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGTTTTTTCTGTCC	290	False	NA	NA	False	NA	NA	NA	119039493	119047531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
tx.23784	chr2	+	7238	10	ISM	ENSMUSG00000033943.16	ENSMUST00000110774.8	13931	24	44001	1939	-22	-107	3prime_fragment	FALSE	canonical	3	162	junction_6	22.3114873806253	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	119771709	119798123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
tx.23785	chr2	+	1725	6	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-5	7	intron_retention	FALSE	canonical	3	85	junction_1	31.8094325633137	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCATGTTCCCCGTCAC	NA	False	NA	138	True	NA	NA	NA	119857979	119863082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119862482_119862594
tx.23786	chr2	+	2150	5	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	85	junction_1	30.5399328748444	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	139	True	NA	NA	NA	119857980	119863074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119862482_119862594
tx.23787	chr2	+	7187	26	NIC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	-4	-6	intron_retention	FALSE	canonical	2	8	junction_11	46.6449397041094	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATCTCAGTGGTAAAG	NA	False	NA	139	True	NA	NA	NA	119857980	119873508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119861982_119862133_119862321_119862482_119862594_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866285_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
tx.23788	chr2	-	4296	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	intron_retention	FALSE	canonical	3	237	junction_14	26.0337863943466	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	NA	False	NA	NA	NA	120183601	120147079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_120148591_120149946_120150039_120151132_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
tx.23789	chr2	-	6749	20	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	51	junction_19	303.670418367825	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	9780	False	NA	NA	False	NA	NA	NA	120394329	120337304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394173
tx.2379	chr11	-	3381	9	FSM	ENSMUSG00000041961.15	ENSMUST00000109867.8	6311	9	-29	2959	-29	-681	multi-exon	FALSE	canonical	3	15	junction_1	9.67923034130297	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCACATCATGTGTCAA	6403	False	NA	NA	False	NA	NA	NA	5394876	5229282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5229762_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
tx.23790	chr2	-	9103	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	51	junction_21	279.463682995445	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCATTTTGTTATTTGT	9790	False	NA	NA	False	NA	NA	NA	120394319	120337307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394173
tx.23791	chr2	-	1802	6	NIC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	69.0582362937253	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	NA	NA	NA	120439835	120434718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439754
tx.23792	chr2	-	1796	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	163	2	-2	-2	multi-exon	FALSE	canonical	3	29	junction_5	57.8321709777525	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTCTGGAAGTAATG	NA	False	NA	NA	False	NA	NA	NA	120439838	120434720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
tx.23793	chr2	+	2677	4	NIC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	55	-219	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	127.791496848056	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAGGTTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	120439918	120451822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_120440027_120442818_120442912_120448353_120448463_120449455
tx.23794	chr2	-	4557	27	NIC	ENSMUSG00000027284.17	novel	5996	28	NA	NA	-4	2	intron_retention	FALSE	canonical	3	36	junction_26	16.3125899757205	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTGTTCTCCCTGCT	6110	False	NA	NA	False	NA	NA	NA	120562003	120548664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182
tx.23795	chr2	-	5213	15	FSM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-33	5886	-4	-5886	multi-exon	FALSE	canonical	3	11	junction_14	10.4060422008425	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCAATGTTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	120680920	120569182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
tx.23796	chr2	-	6180	15	NIC	ENSMUSG00000090100.8	novel	3093	15	NA	NA	-4	3016	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	13.3510299228187	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATGCCCCATTCTAT	NA	False	NA	NA	False	NA	NA	NA	120680920	120573135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120667645_120667742_120680536
tx.23797	chr2	-	4865	15	FSM	ENSMUSG00000090100.8	ENSMUST00000143051.8	3093	15	-48	-1724	-3	1724	multi-exon	FALSE	canonical	3	12	junction_13	10.0369216355597	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTATCTCTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	120680919	120574427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
tx.23798	chr2	+	2648	14	FSM	ENSMUSG00000054484.15	ENSMUST00000067582.14	2921	14	264	9	-252	-9	multi-exon	FALSE	canonical	2	3	junction_2	3.93136379667097	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACAAACGGATCTGCAA	NA	False	NA	NA	False	NA	NA	NA	120807761	120838324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_120807960_120808179_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
tx.23799	chr2	+	3608	10	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-7	1077	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	37.8558017798469	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATCAGTATGTATATAT	NA	False	NA	NA	False	NA	NA	NA	120970901	120988238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
tx.238	chr1	-	1255	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	NA	False	NA	NA	NA	44141592	44125774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
tx.2380	chr11	+	1832	2	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAACCGTGTTGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	5407366	5414195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_5407536_5412532
tx.23800	chr2	-	5893	5	FSM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	-845	24	12	-24	multi-exon	FALSE	canonical	2	4	junction_2	14.6372811683044	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAAGTGCTCTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	121001594	120988777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_120992031_120994227_120994684_120996524_120997200_120999679_120999885_121000290
tx.23801	chr2	-	6042	27	FSM	ENSMUSG00000043909.17	ENSMUST00000110647.8	9405	27	-52	3415	14	-2	multi-exon	FALSE	canonical	3	11	junction_8	35.6224656526131	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8086	False	NA	NA	False	NA	NA	NA	121101874	121028733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
tx.23802	chr2	-	5535	31	NIC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	22.0581050863396	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	NA	False	NA	NA	NA	121185809	121141041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
tx.23803	chr2	+	3791	12	ISM	ENSMUSG00000027242.15	ENSMUST00000028676.12	2789	13	1	4137	1	-3742	5prime_fragment	FALSE	canonical	3	31	junction_10	7.93673330389714	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAACAGTTAAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	121337204	121369748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587
tx.23804	chr2	-	1536	9	NIC	ENSMUSG00000027224.15	novel	1506	10	NA	NA	-44	-2	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	0.484122918275927	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGGCTCTGAAGAGATG	8819	False	NA	NA	False	NA	NA	NA	122144255	122134034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_122134480_122135106_122135325_122135543_122135758_122136034_122136170_122136791_122136850_122137160_122137345_122138371_122138432_122143412_122143530_122144150
tx.23805	chr2	-	1784	6	FSM	ENSMUSG00000033256.15	ENSMUST00000151130.8	1539	6	-10	-235	-10	0	multi-exon	TRUE	canonical	3	35	junction_2	39.8216021777125	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCCGAGCATCCACTCG	NA	False	NA	NA	False	NA	NA	NA	122199628	122179373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_122180021_122184245_122184366_122184511_122184679_122187563_122187771_122189928_122190071_122199127
tx.23806	chr2	-	1868	7	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	7666	6	-4825	-6	3prime_fragment	FALSE	canonical	2	6	junction_3	2.75378527364305	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGAGTTTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	122434118	122424953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062
tx.23807	chr2	+	3415	6	NNC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	56.2473110468403	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCATTGTTTATCAGACA	8289	False	NA	NA	False	NA	NA	NA	122580442	122591392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430_122590705_122590750
tx.23808	chr2	-	3600	16	ISM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	69	7787	69	2	5prime_fragment	FALSE	canonical	3	54	junction_4	12.1812241676369	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTAGAGGATTTTTAA	373	False	NA	NA	False	NA	NA	NA	125624721	125586692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
tx.23809	chr2	+	2486	4	ISM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	619	18987	-564	4571	5prime_fragment	FALSE	canonical	3	64	junction_1	5.55777733351102	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGAAGCCTTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	126394945	126411176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666
tx.2381	chr11	+	2899	3	FSM	ENSMUSG00000020484.20	ENSMUST00000145588.2	987	3	-47	-1865	-37	-2	multi-exon	FALSE	canonical	3	908	junction_2	32	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCCTGTTCTGTGATTTC	NA	False	NA	NA	False	NA	NA	NA	5470957	5475891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_5471201_5471922_5472020_5473332
tx.23810	chr2	-	7109	39	FSM	ENSMUSG00000027365.15	ENSMUST00000028843.12	6985	39	-118	-6	-5	0	multi-exon	FALSE	canonical	3	69	junction_11	63.1605262609672	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	NA	False	NA	NA	NA	126718155	126633484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647005_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
tx.23812	chr2	-	2730	6	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_4	10.5754432531218	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	127286485	127278134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_127278327_127278465_127278554_127278656_127280490_127282305_127282523_127283793_127284045_127286336
tx.23813	chr2	-	2988	6	FSM	ENSMUSG00000034800.16	ENSMUST00000110368.9	2981	6	-7	0	1	0	multi-exon	FALSE	canonical	1	3	junction_5	12.1983605455815	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAGTGTCTCTATTCA	NA	False	NA	NA	False	NA	NA	NA	127426596	127417452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127423996_127426549
tx.23814	chr2	-	5541	5	ISM	ENSMUSG00000034800.16	ENSMUST00000110368.9	2981	6	-6	0	2	0	intron_retention	FALSE	canonical	3	10	junction_4	9.20597631976098	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAGTGTCTCTATTCA	NA	False	NA	NA	False	NA	NA	NA	127426595	127417452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778
tx.23815	chr2	+	2379	5	FSM	ENSMUSG00000027374.13	ENSMUST00000145271.2	718	5	-1531	-130	-1531	130	multi-exon	FALSE	canonical	3	1290	junction_1	136.582163916084	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGGTATATAGCTGT	NA	False	NA	NA	False	NA	NA	NA	127440214	127445905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
tx.23816	chr2	-	2287	20	NNC	ENSMUSG00000027378.17	novel	2296	20	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	17.789940822269	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTTATATCTAAATTT	2798	False	NA	NA	False	NA	NA	NA	127630810	127582654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610176_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
tx.23817	chr2	+	5076	4	FSM	ENSMUSG00000027381.17	ENSMUST00000110341.9	5036	4	-41	1	-40	-1	multi-exon	FALSE	canonical	3	10	junction_1	11.2644968324772	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTGTTCGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	127967917	128004466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150
tx.23818	chr2	+	4982	2	ISM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	10249	-3309	10249	-4	3prime_fragment	FALSE	canonical	3	112	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGTTTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	129652685	129674203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_129653158_129669693
tx.23819	chr2	-	2520	8	FSM	ENSMUSG00000037773.15	ENSMUST00000110277.2	1689	8	-96	-735	-82	1	multi-exon	FALSE	canonical	0	0	junction_7	13.0868371321129	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTTTGGTTTGTT	7552	False	NA	NA	False	NA	NA	NA	130266703	130260143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331_130265473_130266412
tx.2382	chr11	+	1828	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	299	2	-37	-2	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	1028	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCCTGTTCTGTGATTTC	NA	False	NA	NA	False	NA	NA	NA	5470957	5475891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
tx.23820	chr2	+	1235	8	NNC	ENSMUSG00000074797.12	novel	1390	8	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_7	158.473972626422	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTCTGTCTTGAGTT	5428	False	NA	NA	False	NA	NA	NA	130509722	130523533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521371_130522892
tx.23821	chr2	-	4450	7	FSM	ENSMUSG00000027309.19_ENSMUSG00000089662.2	ENSMUST00000110243.8	1984	7	-176	-2290	-176	115	multi-exon	FALSE	canonical	3	61	junction_6	9.03081145609604	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTGTATGTGT	NA	False	NA	NA	False	NA	NA	NA	130682241	130645305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
tx.23822	chr2	+	3872	6	Fusion	ENSMUSG00000037514.19_ENSMUSG00000086329.2	novel	1398	7	NA	NA	1	1	multi-exon	FALSE	canonical	0	0	junction_2	215.37817902471	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTTGCTTGCATGT	865	False	NA	NA	False	NA	NA	NA	131104415	131141107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr2_+_131104736_131115830_131116041_131124511_131124689_131129393_131129518_131135318_131135445_131138192
tx.23823	chr2	-	5502	5	NIC	ENSMUSG00000048911.16	novel	5978	6	NA	NA	4	-426	intron_retention	FALSE	canonical	1	1	junction_3	8.73212459828649	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTTGTATTTGGACC	NA	False	NA	NA	False	NA	NA	NA	131194797	131140412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_131145501_131146171_131146252_131147571_131147614_131155082_131155233_131194655
tx.23824	chr2	+	1976	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110171.9	1938	3	-38	0	-37	0	multi-exon	FALSE	canonical	2	3	junction_2	6	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGTGTCTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	131792743	131798050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_131792836_131794928_131795503_131796740
tx.23825	chr2	-	4746	11	NIC	ENSMUSG00000027339.16	novel	4589	11	NA	NA	109	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	10.2156742312977	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCTGTGGATCTGCTT	NA	False	NA	NA	False	NA	NA	NA	131871812	131834771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871611
tx.23826	chr2	-	4700	11	NNC	ENSMUSG00000027339.16	novel	8233	11	NA	NA	128	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.0494343746637	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCCCCTGTGGATCTGCT	NA	False	NA	NA	False	NA	NA	NA	131871793	131834772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871637
tx.23827	chr2	+	8226	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	40	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	118.061161563922	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	5284	False	NA	NA	False	NA	NA	NA	132105107	132153970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147706_132147835
tx.23828	chr2	-	4621	15	FSM	ENSMUSG00000027356.9	ENSMUST00000038280.5	4915	15	505	-211	228	211	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305393	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGCCTGCTGTCTTGTT	6213	False	NA	NA	False	NA	NA	NA	132787321	132746097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_132748762_132753097_132753240_132757110_132757236_132757820_132758043_132759383_132759491_132760425_132760551_132764716_132764767_132766876_132767009_132767606_132767715_132774975_132775079_132776740_132776955_132777935_132778083_132781201_132781436_132783856_132784026_132787242
tx.23829	chr2	+	386	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_4	128.141523324799	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	NA	False	NA	NA	NA	135488442	135493987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493442_135493766
tx.2383	chr11	-	3389	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-17	0	-17	0	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	811	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTGTAATCCTGTATAA	NA	False	NA	NA	False	NA	NA	NA	5492204	5478886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
tx.23830	chr2	+	5070	8	NIC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	7.17990392750232	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTTTGTTGTGCAAT	9356	False	NA	NA	False	NA	NA	NA	136733132	136913868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_136733310_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
tx.23831	chr2	-	2484	14	FSM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	-2	-2	-2	2	multi-exon	FALSE	canonical	3	23	junction_13	23.0823070642491	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTGACTGCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	139908682	139675397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908406
tx.23832	chr2	+	4577	4	ISM	ENSMUSG00000027427.14	ENSMUST00000143292.8	835	7	2830	-3199	-751	-2	3prime_fragment	FALSE	canonical	3	55	junction_3	1.24721912892465	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCTGTTTCTGGTATT	1753	False	NA	NA	False	NA	NA	NA	144377109	144383913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_144378005_144378202_144378311_144379085_144379278_144380531
tx.23833	chr2	+	4936	15	NNC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	135	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.22093905791262	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCAGTTGTCTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	145517421	145729533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_145517505_145554374_145554499_145615724_145615864_145628241_145628335_145664184_145664286_145664529_145664682_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
tx.23834	chr2	-	6826	21	ISM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	106994	1429	1273	-1429	3prime_fragment	FALSE	canonical	3	25	junction_1	3.71315229959666	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTAATAAAAATATTGATT	NA	False	NA	NA	False	NA	NA	NA	146246930	146083227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782
tx.23835	chr2	-	1446	2	FSM	ENSMUSG00000054160.3	ENSMUST00000067020.3	1725	2	277	2	277	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATACGGATTGTTACCG	NA	False	NA	NA	False	NA	NA	NA	146927088	146925237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_146926410_146926814
tx.23836	chr2	-	4085	8	ISM	ENSMUSG00000027438.15	ENSMUST00000028926.13	4412	11	25187	3	25111	-3	3prime_fragment	FALSE	canonical	1	1	junction_7	5.19418827505653	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTTGACTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	148549200	148535907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148549078
tx.23837	chr2	+	3978	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	11	-1192	11	1192	multi-exon	FALSE	canonical	3	15	junction_1	5.35412613473634	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCAGTGTCTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	150060003	150083837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
tx.23838	chr2	+	4147	4	NNC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	9	2024	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	53.766986979827	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAGGAGGTGTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	150153359	150170956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_150153479_150165648_150165749_150165947_150166009_150167089
tx.23839	chr2	-	3168	4	NNC	ENSMUSG00000063364.11	novel	1410	3	NA	NA	-2	-14678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.17726659862414	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGTTTTTCTCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	150204655	150167534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_150170367_150186228_150186290_150186499_150186627_150204507
tx.2384	chr11	-	859	3	FSM	ENSMUSG00000020477.11	ENSMUST00000020770.11	700	3	-17	-142	3	142	multi-exon	FALSE	canonical	3	2385	junction_2	231.5	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCACCACCGCCTGGC	NA	False	NA	NA	False	NA	NA	NA	5657684	5654183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5654733_5657297_5657410_5657486
tx.23840	chr2	-	5417	10	NNC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.5305788809963	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTGCTGATTATTAC	1011	False	NA	NA	False	NA	NA	NA	150450475	150425000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150435151_150436221_150436338_150441647_150441738_150442163_150442281_150450307
tx.23841	chr2	+	2504	14	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	38.7806759662898	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	NA	False	NA	NA	NA	150590992	150613593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_150591154_150594932_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
tx.23842	chr2	-	3680	6	NIC	ENSMUSG00000032869.16	novel	3809	7	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	130.314389075037	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTTTTGGTGCTAA	NA	False	NA	NA	False	NA	NA	NA	151583184	151557731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151577393_151577547_151582930
tx.23843	chr2	-	1433	3	FSM	ENSMUSG00000059361.7	ENSMUST00000079278.5	1455	3	18	4	18	-4	multi-exon	FALSE	canonical	1	2	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCAGCGTGGCTTCCTT	8707	False	NA	NA	False	NA	NA	NA	152218540	152210678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_152211844_152216015_152216211_152218467
tx.23844	chr2	+	3541	2	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	27698	3618	5320	16	3prime_fragment	FALSE	canonical	3	175	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTAGTGTTTCGTG	NA	False	NA	NA	False	NA	NA	NA	152539078	152546972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_152542189_152546541
tx.23845	chr2	-	2589	3	NIC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	150.5	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCCTTGGCTCTGC	NA	False	NA	NA	False	NA	NA	NA	152672587	152622589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_152624203_152671346_152672041_152672305
tx.23846	chr2	-	5935	2	ISM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	82	0	1	0	intron_retention	FALSE	canonical	3	241	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	8721	False	NA	NA	False	NA	NA	NA	152857265	152850809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_152851657_152852177
tx.23847	chr2	+	4774	2	ISM	ENSMUSG00000046020.14	ENSMUST00000152390.2	4833	3	3654	-2190	3654	6	3prime_fragment	FALSE	canonical	3	117	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCCTTCATAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	153103145	153112173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_153103361_153107614
tx.23848	chr2	-	158	1	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154255292	154255134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_-_154255100_154255300
tx.23849	chr2	-	1905	13	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	-6	10	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_6	11.513277359447	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCTCTTGTCTGTCTG	7281	False	NA	NA	False	NA	NA	NA	154400816	154386308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388837_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
tx.2385	chr11	-	806	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	-2	191	1	152	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	477	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCCTGGCCTCTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	5657689	5654173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
tx.23850	chr2	-	2467	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	38	227	38	0	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	113	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9540	False	NA	NA	False	NA	NA	NA	154411774	154401553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
tx.23851	chr2	+	3243	15	FSM	ENSMUSG00000059842.13	ENSMUST00000081926.13	3299	15	51	5	-8	-5	multi-exon	FALSE	canonical	2	3	junction_5	3.22062866217014	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGCCTGAGTCTCAGA	5773	False	NA	NA	False	NA	NA	NA	154455267	154488736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_154455323_154463672_154463784_154466774_154466972_154468697_154468848_154469807_154470054_154470719_154470916_154472328_154472420_154474198_154474390_154476006_154476198_154479933_154480143_154483235_154483333_154483901_154484035_154485408_154485521_154485706_154485778_154487543
tx.23852	chr2	+	815	3	FSM	ENSMUSG00000027602.10	ENSMUST00000154596.2	826	3	15	-4	15	-1	multi-exon	FALSE	canonical	3	438	junction_2	23	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCCAGCTGCTTG	NA	False	NA	NA	False	NA	NA	NA	155118823	155119992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_155118934_155119017_155119125_155119394
tx.23853	chr2	-	2870	13	ISM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	11757	10	-333	0	3prime_fragment	FALSE	canonical	3	1358	junction_5	366.17865251207	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	6355	False	NA	NA	False	NA	NA	NA	156010401	155989168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604
tx.23854	chr2	+	2665	2	ISM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	4055	4	3133	-4	intron_retention	FALSE	canonical	3	217	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGAATTTTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	156686074	156697486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_156686302_156695048
tx.23855	chr2	-	2742	16	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_15	44.4400220021948	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5994	False	NA	NA	False	NA	NA	NA	156833896	156769265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833681
tx.23856	chr2	-	4412	5	ISM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	51650	-2	-132	2	3prime_fragment	FALSE	canonical	3	12	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTTTATGTCTTGG	NA	False	NA	NA	False	NA	NA	NA	156869524	156857716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306
tx.23857	chr2	-	4051	2	ISM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	57715	0	5933	0	3prime_fragment	FALSE	canonical	3	12	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGCCTTTTATGTCTT	NA	False	NA	NA	False	NA	NA	NA	156863459	156857718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_156860420_156862109
tx.23858	chr2	-	2327	15	ISM	ENSMUSG00000027641.14	ENSMUST00000154721.8	2715	16	-4	2812	-4	-2812	5prime_fragment	FALSE	canonical	3	55	junction_2	35.4011991034087	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAACTCTGTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	157046458	157011709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
tx.23859	chr2	+	3717	8	FSM	ENSMUSG00000027651.17	ENSMUST00000109518.8	4399	8	-206	888	-2	-888	multi-exon	FALSE	canonical	2	5	junction_6	76.3520310997764	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGATGTTTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	157870414	157919239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157912480_157912577_157916849
tx.2386	chr11	-	3691	6	FSM	ENSMUSG00000049680.18	ENSMUST00000093362.12	5089	6	-168	1566	-168	4	multi-exon	FALSE	canonical	3	47	junction_5	4.96386945839634	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTGAATGTATACTCAA	8679	False	NA	NA	False	NA	NA	NA	5691318	5664982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
tx.23860	chr2	+	1894	15	FSM	ENSMUSG00000016024.10	ENSMUST00000016168.9	2525	15	92	539	-27	-539	multi-exon	FALSE	canonical	1	2	junction_3	1.75691055374984	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACATCCCAGCTGAACCT	NA	False	NA	NA	False	NA	NA	NA	158148504	158174233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_158148714_158150600_158150716_158151520_158151650_158155392_158155549_158156072_158156137_158159456_158159521_158161591_158161684_158162183_158162361_158163974_158164035_158166428_158166597_158167626_158167695_158168147_158168191_158169436_158169501_158170265_158170343_158173825
tx.23861	chr2	-	2989	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	30.9476978142155	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCGTGAGTTCTT	8336	False	NA	NA	False	NA	NA	NA	158203453	158195619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202446_158202520_158202862_158202991_158203324
tx.23862	chr2	-	3383	5	NIC	ENSMUSG00000085385.8	novel	1553	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	34	junction_3	25.5147016443461	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCGTGAGTTCTT	8339	False	NA	NA	False	NA	NA	NA	158203450	158195619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862
tx.23863	chr2	-	2776	4	NIC	ENSMUSG00000085385.8	novel	1553	6	NA	NA	888	-7	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	29.2726645334669	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCAAGCTTGGTCTCGTG	9282	False	NA	NA	False	NA	NA	NA	158202507	158195626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383
tx.23864	chr2	+	5977	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	24	2365	1	-758	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGGTTTGAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	158251796	158338808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
tx.23865	chr2	+	4128	4	NIC	ENSMUSG00000017868.17	novel	2693	14	NA	NA	1079	0	intron_retention	FALSE	canonical	3	14	junction_3	4.18993502999218	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTACTGGGTATGGTT	NA	False	NA	NA	False	NA	NA	NA	162841110	162856046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_162841189_162845191_162845288_162846066_162848804_162854829
tx.23866	chr2	+	1110	5	FSM	ENSMUSG00000035268.15	ENSMUST00000099105.9	640	5	-8	-462	-8	-2	multi-exon	FALSE	canonical	3	7	junction_1	187.314408148439	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTTATGATCTTTT	8611	False	NA	NA	False	NA	NA	NA	163500326	163568070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_163500413_163501069_163501156_163545405_163545476_163563047_163563222_163567376
tx.23867	chr2	-	2300	2	ISM	ENSMUSG00000040164.4	ENSMUST00000045196.4	2712	4	2399	0	2399	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGGTCATGCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	164010634	164005538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_164006936_164009731
tx.23868	chr2	+	3538	2	NIC	ENSMUSG00000017723.12	novel	558	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	559	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	111	False	NA	NA	False	NA	NA	NA	164404496	164410430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_164407859_164410254
tx.23869	chr2	+	1539	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	14	1037	-12	149	multi-exon	FALSE	canonical	3	13	junction_2	6.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCAATCTCTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	164627924	164634693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_164628245_164628617_164628776_164633632
tx.2387	chr11	+	946	5	ISM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	-12	3989	9	-1155	5prime_fragment	FALSE	canonical	3	13	junction_2	33.1313673125635	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGTGGACGGCATTAA	NA	False	NA	NA	False	NA	NA	NA	5712137	5730721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205
tx.23870	chr2	-	1950	10	NIC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	9	-1	intron_retention	FALSE	canonical	3	63	junction_9	61.9452167365908	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	5714	False	NA	NA	False	NA	NA	NA	165129735	165118474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129703
tx.23871	chr2	-	1329	2	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTATGTGTGGGTTGT	NA	False	NA	NA	False	NA	NA	NA	166338034	166334145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_-_166335201_166337760
tx.23872	chr2	+	1203	3	NNC	ENSMUSG00000042854.10	novel	4426	2	NA	NA	9	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGTGTGTGTGCAAA	NA	False	NA	NA	False	NA	NA	NA	166635695	166638096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_166635989_166636604_166636720_166637301
tx.23873	chr2	-	5999	12	ISM	ENSMUSG00000039501.15	ENSMUST00000048988.14	7218	14	6676	0	4086	0	3prime_fragment	FALSE	canonical	3	14	junction_7	6.1119041141715	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCATCTCTTATCTGT	7636	False	NA	NA	False	NA	NA	NA	166898259	166877712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073
tx.23874	chr2	+	1560	2	FSM	ENSMUSG00000074578.15_ENSMUSG00002075888.1	ENSMUST00000136378.2	731	2	-367	-462	-80	-18	multi-exon	FALSE	canonical	3	1008	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACTAATGATATTTATC	NA	False	NA	NA	False	NA	NA	NA	166904773	166907764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_166905648_166907078
tx.23876	chr2	+	1273	3	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	9	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTATGGTGATTATTGT	NA	False	NA	NA	False	NA	NA	NA	168847925	168866329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_168848074_168864580_168864668_168865291
tx.23877	chr2	+	1880	2	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAATTTGTTATGGT	NA	False	NA	NA	False	NA	NA	NA	168847933	168866320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_168848074_168864580
tx.23878	chr2	+	703	2	NNC	ENSMUSG00000027560.5	novel	1768	8	NA	NA	144118	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_1	0	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTAGTTCTTTCTGCAC	NA	False	NA	NA	False	NA	NA	NA	170717844	170721689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_170717952_170721093
tx.23879	chr2	+	473	2	ISM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	5928	2823	5928	-2823	3prime_fragment	FALSE	canonical	3	153	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTGGTGTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	172193412	172194846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_172193545_172194505
tx.2388	chr11	+	2096	5	NNC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	35.5	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGTTGTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	5712139	5731876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_5712241_5715508_5715572_5718888_5719073_5719166_5719244_5730205
tx.23880	chr2	-	8263	4	ISM	ENSMUSG00000055897.14	ENSMUST00000154908.2	2399	5	796	-6547	245	399	intron_retention	FALSE	canonical	3	15	junction_3	3.74165738677394	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATTCTGTGTTCTGTA	4415	False	NA	NA	False	NA	NA	NA	173432310	173421831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297
tx.23881	chr2	+	3677	8	NNC	ENSMUSG00000027522.16	novel	647	7	NA	NA	-8	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.4566426704102	3	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCATCCAGCATTCCTA	NA	False	NA	NA	False	NA	NA	NA	173918092	173941557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_173918176_173932397_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.23882	chr2	+	9650	5	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	8907	-114	intron_retention	FALSE	canonical	3	84	junction_1	11.3219918742243	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAAAATGACTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	173927765	173941449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.23883	chr2	-	3689	7	NNC	ENSMUSG00000086537.8	novel	1262	5	NA	NA	-20	14810	intron_retention	FALSE	canonical	0	0	junction_1	2.3094010767585	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTGTTGTTCTCATC	NA	False	NA	NA	False	NA	NA	NA	174137202	174108219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_174108535_174109838_174109963_174122914_174125218_174125458_174125602_174126252_174126459_174127932_174128191_174136862
tx.23884	chr2	-	1442	4	NNC	ENSMUSG00000085103.4	novel	474	3	NA	NA	-3860	11947	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	6.16441400296898	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAACACCTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	175863519	175845868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_175847006_175859274_175859336_175859528_175859656_175863402
tx.23885	chr2	-	4134	2	Antisense	novelGene_ENSMUSG00000078866.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGTCTTTACCACAT	NA	False	NA	NA	False	NA	NA	NA	177170985	177166767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_177167671_177167754
tx.23886	chr2	-	3237	15	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	27.0969536656648	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	179618468	179553945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179618376
tx.23887	chr2	+	3375	2	NNC	ENSMUSG00000085704.2	novel	1905	2	NA	NA	6	1412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGATAAAAAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	179618651	179622218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_179618986_179619177
tx.23888	chr2	+	1734	10	FSM	ENSMUSG00000039069.20	ENSMUST00000184862.8	1730	10	-6	2	-2	0	multi-exon	FALSE	canonical	3	26	junction_8	58.7703208880465	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATGTGTCTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	179712378	179727693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
tx.23889	chr2	-	3743	8	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	108	junction_6	11.3999641961486	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCCTTGCTTGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	179915288	179900333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
tx.2389	chr11	+	1837	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	9	0	9	0	multi-exon	FALSE	canonical	3	68	junction_2	16.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGTTGTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	5712137	5731876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_5712241_5715508_5715572_5730205
tx.23890	chr2	+	1848	4	FSM	ENSMUSG00000027569.16	ENSMUST00000150757.8	1825	4	-23	0	-12	0	multi-exon	TRUE	canonical	3	65	junction_2	3.55902608401044	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	False	NA	NA	False	NA	NA	NA	180224492	180228097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180224749_180225193_180225316_180226198_180226665_180227093
tx.23891	chr2	-	2534	3	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	513	-3	intron_retention	FALSE	canonical	3	6	junction_1	11.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTCCCAGTGAGTCGC	6243	False	NA	NA	False	NA	NA	NA	180283627	180263751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_180264508_180280196_180280441_180282093
tx.23892	chr2	-	7864	4	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-38	-6	intron_retention	FALSE	canonical	3	159	junction_3	16.1107279647928	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGATATCGCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	180351830	180322871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_180329591_180330616_180331449_180333656_180333842_180351702
tx.23893	chr2	+	1962	6	FSM	ENSMUSG00000038840.8	ENSMUST00000137859.2	1529	6	-431	-2	-431	-1	multi-exon	FALSE	canonical	3	12	junction_1	3.81575680566778	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCAGCTAGGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	180570384	180575802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180571307_180572597_180573131_180573211_180573258_180574711_180574784_180574929_180575129_180575612
tx.23894	chr2	+	722	3	FSM	ENSMUSG00000016344.15	ENSMUST00000138800.8	771	3	51	-2	51	2	multi-exon	FALSE	canonical	3	861	junction_2	3.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3676	False	NA	NA	False	NA	NA	NA	180829379	180830299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_180829680_180829796_180829894_180829974
tx.23895	chr2	-	2473	6	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	-7	-607	intron_retention	FALSE	canonical	3	258	junction_2	26.2937254872717	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTAGATGGTGGTTC	6112	False	NA	NA	False	NA	NA	NA	181007161	181000284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181006192_181006397
tx.23896	chr2	+	3528	12	NNC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	49.5383647971636	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGCTCTTGGTTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	181007202	181025422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_181007286_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
tx.23897	chr2	+	4323	11	NNC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	26	junction_1	46.5855127695295	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	181007205	181025421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_181007286_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
tx.23898	chr2	-	5703	17	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	20	2	intron_retention	TRUE	canonical	3	14	junction_13	13.0574152783007	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGGCTGAGTTTGT	7458	False	NA	NA	False	NA	NA	NA	181234576	181223893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234206
tx.23899	chr2	-	4163	4	NIC	ENSMUSG00000089917.8	novel	760	6	NA	NA	-2727	-7439	intron_retention	FALSE	canonical	3	54	junction_1	1.63299316185545	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTTTGTGTGGCTGAGT	8160	False	NA	NA	False	NA	NA	NA	181229412	181223897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_181226867_181227465_181227565_181228091_181228614_181228839
tx.239	chr1	-	1204	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	2	-246	-1	1	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	NA	False	NA	NA	NA	44141599	44125774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
tx.2390	chr11	+	2346	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	2	-347	2	14	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	436	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGCATTCGTGCATT	NA	False	NA	NA	False	NA	NA	NA	5738489	5750976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
tx.23900	chr2	-	5805	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-9	-1	intron_retention	FALSE	canonical	2	4	junction_9	14.2229860905976	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATTTTGTGTGGCTGAG	7474	False	NA	NA	False	NA	NA	NA	181234560	181223898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230417_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
tx.23901	chr2	+	3910	9	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	31	junction_5	5.66651347832157	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCTTCAGCTGGGTCC	2293	False	NA	NA	False	NA	NA	NA	181322103	181329855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
tx.23903	chr3	-	5684	4	NIC	ENSMUSG00000040374.14	novel	2051	5	NA	NA	2	3783	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	25.9786236911983	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCACAACATGCAGAAACT	NA	False	NA	NA	False	NA	NA	NA	5641203	5621464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_5626825_5628224_5628333_5628679_5628790_5641097
tx.23904	chr3	+	1676	3	ISM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	36241	2	-14665	-2	3prime_fragment	FALSE	canonical	3	1815	junction_1	33.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGGTTTGGTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	8610660	8626664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_8610806_8619851_8620044_8625325
tx.23905	chr3	+	5020	4	ISM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	27676	5	27676	-5	3prime_fragment	FALSE	canonical	3	53	junction_3	7.03957069398096	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACTGCTTCTGGCTTTG	NA	False	NA	NA	False	NA	NA	NA	9343337	9350388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_9343413_9345015_9345193_9345350_9345524_9345793
tx.23906	chr3	+	5206	5	NIC	ENSMUSG00000047213.15	novel	3196	6	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	187.495833287036	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	16237392	16271198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_16237685_16241130_16241280_16243641_16243728_16257989_16259589_16268118
tx.23907	chr3	-	1673	5	NIC	ENSMUSG00000039519.7	novel	2166	6	NA	NA	-4	-321	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	6.28490254498827	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGCAATCATTTCAG	NA	False	NA	NA	False	NA	NA	NA	18297506	18126434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_18126918_18150686_18150894_18151367_18151959_18157864_18158002_18297251
tx.23908	chr3	-	3225	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	22	-746	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	103.065782661151	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTTATTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	19217207	19186311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19216753
tx.23909	chr3	-	6663	24	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_23	25.6582896173334	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	NA	False	NA	NA	False	NA	NA	NA	27764600	27470309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27764494
tx.2391	chr11	-	2896	11	FSM	ENSMUSG00000020474.12	ENSMUST00000020767.4	2924	11	29	-1	29	0	multi-exon	FALSE	canonical	3	32	junction_5	4.04969134626332	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTTTTACAAGTTTTA	409	False	NA	NA	False	NA	NA	NA	5787987	5777859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
tx.23910	chr3	+	4954	28	NIC	ENSMUSG00000027695.17	novel	4849	27	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	6.00228580144678	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCCAAGGATGGTGAAA	8206	False	NA	NA	False	NA	NA	NA	27992843	28187379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_27992900_28006661_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28133337_28133452_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
tx.23911	chr3	+	4998	5	NNC	ENSMUSG00000050192.9	novel	5027	5	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.1206964784223	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTGTATGTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	28835420	28852992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_28835563_28836194_28836366_28836876_28836982_28847833_28847966_28848544
tx.23912	chr3	-	2838	2	FSM	ENSMUSG00000074653.11	ENSMUST00000130731.2	705	2	-32	-2101	1	1926	multi-exon	FALSE	canonical	3	18	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGCCACCATTATGT	NA	False	NA	NA	False	NA	NA	NA	30753991	30750169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_30752864_30753847
tx.23913	chr3	+	5703	8	NIC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	-9609	9	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	9.55755924781585	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATGGCTCTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	32959542	32992229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_32959614_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
tx.23914	chr3	+	4572	11	NIC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	0	85	intron_retention	FALSE	canonical	2	24	junction_2	64.0059372246044	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTAAGTGATAAATTA	NA	False	NA	NA	False	NA	NA	NA	33854331	33864178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
tx.23915	chr3	+	5093	2	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	16954	0	intron_retention	FALSE	canonical	3	780	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTATTTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	34117734	34123491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_34122402_34123065
tx.23916	chr3	-	3321	7	FSM	ENSMUSG00000027708.15	ENSMUST00000178098.8	4434	7	-223	1336	-223	65	multi-exon	FALSE	canonical	1	4	junction_6	71.2618411213182	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAATTGATTTAATGT	NA	False	NA	NA	False	NA	NA	NA	35986706	35947589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986341
tx.23917	chr3	-	4770	2	FSM	ENSMUSG00000027709.10_ENSMUSG00000105095.2	ENSMUST00000200552.2	468	2	103	-4405	103	2	multi-exon	FALSE	canonical	3	303	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGCCTTGGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	36015155	36009582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_36014279_36015081
tx.23918	chr3	+	2658	3	NNC	ENSMUSG00000051444.10	novel	2433	2	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCCATTCTGTTTTTT	1237	False	NA	NA	False	NA	NA	NA	37366688	37375599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_37366735_37369254_37369466_37373198
tx.23919	chr3	-	1541	5	FSM	ENSMUSG00000050174.16	ENSMUST00000146324.8	1264	5	-357	80	-332	-4	multi-exon	FALSE	canonical	2	6	junction_4	11.0792599030802	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGATTGTAGCTCTAA	NA	False	NA	NA	False	NA	NA	NA	37474692	37459138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473971
tx.2392	chr11	+	3899	21	NNC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	-64	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	4.12886182863995	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGTTCTGACTGGC	8608	False	NA	NA	False	NA	NA	NA	5811882	5822089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817094_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
tx.23920	chr3	-	2247	14	NIC	ENSMUSG00000059834.13	novel	3005	21	NA	NA	65	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	13.4128790885398	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTCATGTATTTGA	NA	False	NA	NA	False	NA	NA	NA	41696775	41581154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41688602_41688671_41696429
tx.23921	chr3	+	3553	7	FSM	ENSMUSG00000025766.15	ENSMUST00000146165.8	3574	7	17	4	17	-4	multi-exon	TRUE	canonical	3	22	junction_1	8.72576007513895	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATATTTTGTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	41697069	41713370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
tx.23922	chr3	+	3504	6	NNC	ENSMUSG00000025766.15	novel	3574	7	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_4	17.7943811356282	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATTTTGTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	41697090	41713369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_41697125_41699130_41699273_41700982_41701164_41703107_41703169_41708158_41708359_41710483
tx.23923	chr3	-	2989	20	NNC	ENSMUSG00000027742.14	novel	3182	19	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_17	47.0737030411411	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	NA	False	NA	NA	NA	52924639	52889542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922221_52922295_52922889_52923034_52924466
tx.23924	chr3	-	1549	9	NIC	ENSMUSG00000027793.7	novel	1560	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	1.65359456941537	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGGGGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	54962449	54952895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_54953130_54953387_54953522_54954629_54954744_54955828_54956034_54957098_54957323_54957966_54958092_54958269_54958517_54961753_54961940_54962369
tx.23925	chr3	-	7008	29	NIC	ENSMUSG00000027799.13	novel	10986	58	NA	NA	-30	20080	combination_of_known_splicesites	TRUE	canonical	1	1	junction_3	2.24148046921617	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTAGTTTGATATCTTC	NA	False	NA	NA	False	NA	NA	NA	56091152	55889546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_55891267_55893030_55893200_55895388_55895497_55898458_55898590_55899754_55899936_55907907_55908062_55910144_55910363_55911954_55912972_55915656_55915850_55916637_55916762_55916982_55917065_55926786_55926896_55937303_55937397_55938873_55938972_55939062_55939126_55939911_55939992_55943301_55943471_55944559_55944713_55948274_55948384_55965370_55965505_55966053_55966252_55987279_55987427_55989792_55989913_55992662_55992790_55993583_55993706_55994395_55994492_55994817_55994919_55998309_55998542_56090392
tx.23926	chr3	+	5731	10	NIC	ENSMUSG00000027763.14	novel	5151	9	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	38.8857141561281	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGCCTGAGATTG	NA	False	NA	NA	False	NA	NA	NA	60408539	60537169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
tx.23927	chr3	+	5702	11	NIC	ENSMUSG00000027763.14	novel	5151	9	NA	NA	156	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	39.6162845304806	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGCCTGAGATTG	NA	False	NA	NA	False	NA	NA	NA	60435704	60537169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_60435945_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
tx.23928	chr3	-	4642	6	ISM	ENSMUSG00000027829.16	ENSMUST00000135719.8	1981	12	5953	-41	-211	-3	intron_retention	FALSE	canonical	3	188	junction_4	11.47170431976	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	NA	NA	NA	65859500	65853574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111
tx.23929	chr3	+	3083	9	FSM	ENSMUSG00000034544.18	ENSMUST00000046542.13	3062	9	-17	-4	1	-1	multi-exon	FALSE	canonical	2	12	junction_2	112.554153632818	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGACTGCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	66893018	67265727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_66893140_66901849_66902046_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
tx.2393	chr11	-	1573	11	FSM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	65	8	-15	0	multi-exon	FALSE	canonical	3	869	junction_10	541.870242770352	1821	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGAACCTTGTTCACTT	9570	False	NA	NA	False	NA	NA	NA	5828227	5822187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
tx.23930	chr3	+	3325	10	NIC	ENSMUSG00000034544.18	novel	3213	10	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	108.773408151936	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAACACTGTGACTGCT	NA	False	NA	NA	False	NA	NA	NA	66893279	67265722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_66893522_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
tx.23931	chr3	-	6033	4	FSM	ENSMUSG00000027792.12	ENSMUST00000029367.6	6210	4	178	-1	5	1	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTGTCTTAGTATTTT	NA	False	NA	NA	False	NA	NA	NA	73615570	73543139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_73547375_73555969_73556137_73607904_73609433_73615467
tx.23932	chr3	-	2178	2	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	78257	16	78257	-1	3prime_fragment	FALSE	canonical	3	56	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCCTTGTCTAAACTTT	NA	False	NA	NA	False	NA	NA	NA	78974027	78969838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_78971869_78973879
tx.23933	chr3	-	5681	3	FSM	ENSMUSG00000061175.13	ENSMUST00000149475.8	3629	3	-1416	-636	-1416	-277	multi-exon	FALSE	canonical	3	112	junction_2	2	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCCTAGTGCTGCATG	NA	False	NA	NA	False	NA	NA	NA	79374928	79363557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_79367049_79369435_79369552_79372854
tx.23934	chr3	-	3039	11	NNC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	-15	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	12.2918672300021	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATTTGCTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	80820936	80750912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_80752565_80757734_80757783_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
tx.23937	chr3	-	820	7	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	3	23	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	79.9112354775945	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATCCCACAGTACTCAT	NA	False	NA	NA	False	NA	NA	NA	84063090	83995216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_83995482_84000861_84000907_84012241_84012357_84041324_84041474_84045475_84045534_84049005_84049072_84062968
tx.23938	chr3	+	3940	2	Genic_Genomic	ENSMUSG00000104043.2	novel	1029	1	NA	NA	-18656	1	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCTTTGATTACAATTG	NA	False	NA	NA	False	NA	NA	NA	84062754	84082440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr3_+_84063077_84078822
tx.23939	chr3	-	6501	9	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	19480	-2892	-1810	-4	3prime_fragment	FALSE	canonical	3	24	junction_7	21.7010944424469	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAGACTGAGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	84100665	84067751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527
tx.2394	chr11	-	736	6	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	75	0	75	0	3prime_fragment	FALSE	canonical	3	38	junction_4	23.9115035077261	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	NA	False	NA	NA	NA	5848707	5846636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831_5847937_5848159_5848236_5848425
tx.23940	chr3	-	7562	13	NNC	ENSMUSG00000027993.17	novel	7200	12	NA	NA	-157	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	30.2438010177292	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAGACTGAGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	84128353	84067751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84119892_84120102_84127935
tx.23941	chr3	-	6391	3	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	39933	-2891	17618	-5	intron_retention	FALSE	canonical	3	69	junction_2	3	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGACTGAGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	84080212	84067752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_84072557_84074958_84075100_84078766
tx.23942	chr3	+	5694	20	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-47	-114	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.3684951815425	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTTGGGCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	85878368	86036303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_85878732_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
tx.23943	chr3	+	4804	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-13	-636	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	34.9806554899047	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCAGACTACACTGCA	NA	False	NA	NA	False	NA	NA	NA	85878402	86035781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901_86034021_86034394
tx.23944	chr3	-	2595	3	FSM	ENSMUSG00000028076.13	ENSMUST00000107620.3	1475	3	-1124	4	-117	-4	multi-exon	FALSE	canonical	3	84	junction_1	1.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTATCCAGAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	86906378	86903144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_86903909_86903996_86904094_86904644
tx.23945	chr3	+	6679	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_21	22.260634125956	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6167	False	NA	NA	False	NA	NA	NA	87524880	87645341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
tx.23946	chr3	+	6568	39	NIC	ENSMUSG00000041977.19	novel	5603	39	NA	NA	-1	6	combination_of_known_splicesites	FALSE	canonical	3	35	junction_20	20.8896487242537	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTATGATTCTTAG	6167	False	NA	NA	False	NA	NA	NA	87524880	87645347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
tx.23947	chr3	+	6706	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	3	40	junction_18	18.0509627892179	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6119	False	NA	NA	False	NA	NA	NA	87524832	87645341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
tx.23948	chr3	+	2100	6	ISM	ENSMUSG00000041977.19	ENSMUST00000152006.2	6124	39	114566	0	113906	0	3prime_fragment	FALSE	canonical	3	60	junction_2	24.7030362506312	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	NA	False	NA	NA	False	NA	NA	NA	87639973	87645341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
tx.23949	chr3	-	5007	6	ISM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-54	11	-37	-11	intron_retention	FALSE	canonical	3	33	junction_5	33.4388995034227	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAATTAACAGAC	9406	False	NA	NA	False	NA	NA	NA	87837488	87829918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230
tx.2395	chr11	+	2455	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	86	0	86	0	multi-exon	FALSE	canonical	3	192	junction_4	17.3205080756888	216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTGTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	5905778	5917780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
tx.23950	chr3	+	897	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	30	4	30	-4	multi-exon	FALSE	canonical	3	31	junction_1	3.29983164553722	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTCTGTGGCTCCC	8861	False	NA	NA	False	NA	NA	NA	87856002	87860679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
tx.23951	chr3	+	5982	9	ISM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	7	2	7	-2	intron_retention	FALSE	canonical	3	138	junction_6	11.4891252930761	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCAGTTTGGGTTTTGA	6545	False	NA	NA	False	NA	NA	NA	88049685	88079391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821
tx.23952	chr3	-	3635	4	FSM	ENSMUSG00000074489.10	ENSMUST00000075523.11	717	4	-2912	-6	0	0	multi-exon	FALSE	canonical	3	35	junction_3	4.49691252107735	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGAGTCTGTCCATT	7128	False	NA	NA	False	NA	NA	NA	88280050	88275922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779
tx.23953	chr3	-	3503	3	ISM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	10812	-7	597	6	3prime_fragment	FALSE	canonical	1	2	junction_1	4.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACAGCCTGGGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	88669094	88652000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_88655318_88656085_88656210_88669032
tx.23954	chr3	-	3646	4	NIC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	16.2138486760204	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	89300641	89284952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300617
tx.23955	chr3	-	3650	4	NNC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.6599986661331	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	89301001	89284952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300973
tx.23956	chr3	+	2877	9	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	1	-1988	intron_retention	FALSE	canonical	3	58	junction_1	11.9687092035858	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAGAAAAAAAAAA	4369	False	NA	NA	False	NA	NA	NA	89344013	89356271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353481_89353586_89353719_89354352_89355573_89355979
tx.23957	chr3	+	5843	15	FSM	ENSMUSG00000027951.17	ENSMUST00000029563.14	3753	15	-53	-2037	-53	-3	multi-exon	FALSE	canonical	3	12	junction_1	36.4602803173032	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTGTTACAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	89638001	89660750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
tx.23958	chr3	+	3798	2	Fusion	ENSMUSG00000027942.18_ENSMUSG00000118506.2	novel	3097	4	NA	NA	-1488	185	intron_retention	FALSE	canonical	3	130	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTCAGATTTAGGCC	5169	False	NA	NA	False	NA	NA	NA	89968614	89973367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr3_+_89971862_89972816
tx.23959	chr3	-	344	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	3	-2	0	-2	multi-exon	TRUE	canonical	3	13930	junction_3	2970.01597451746	675	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTCTTGTTTAACT	NA	False	NA	NA	False	NA	NA	NA	90120955	90119975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
tx.2396	chr11	-	4006	19	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	26603	1	intron_retention	FALSE	canonical	2	5	junction_18	32.9330128189532	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	729	False	NA	NA	False	NA	NA	NA	5988935	5919642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_5988561
tx.23960	chr3	+	1546	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	-23	-416	-23	0	multi-exon	FALSE	canonical	3	20	junction_1	3.88613443106727	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCAAGTTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	90128070	90133692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
tx.23961	chr3	+	3398	2	NIC	ENSMUSG00000027936.19	novel	2311	13	NA	NA	1626	-10	intron_retention	FALSE	canonical	3	121	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATTAAACCTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	90167897	90171417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_90170665_90170786
tx.23962	chr3	+	4792	7	ISM	ENSMUSG00000042390.10	ENSMUST00000049382.6	1906	10	8734	-3490	-1030	-1797	3prime_fragment	FALSE	canonical	3	17	junction_4	3.39934634239519	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTGTTATGTCATTT	3341	False	NA	NA	False	NA	NA	NA	90257694	90268917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
tx.23963	chr3	+	5129	19	FSM	ENSMUSG00000038902.15	ENSMUST00000042402.12	4775	19	-345	-9	-199	9	multi-exon	FALSE	canonical	3	5	junction_6	17.676796536773	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTGAACTCTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	94744678	94788195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
tx.23964	chr3	+	6223	18	ISM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	16383	2	-9778	0	3prime_fragment	FALSE	canonical	3	43	junction_4	11.9125998254821	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGTGTTAAGTATA	NA	False	NA	NA	False	NA	NA	NA	94761260	94789635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
tx.23965	chr3	+	2569	10	FSM	ENSMUSG00000038861.15	ENSMUST00000167008.8	1962	10	98	-705	53	12	multi-exon	FALSE	canonical	0	0	junction_1	11.4611528517579	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTCTGGTTTTCTCCCT	NA	False	NA	NA	False	NA	NA	NA	94882239	94914166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94882397_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
tx.23966	chr3	+	2774	10	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	9595	220	8182	-158	3prime_fragment	FALSE	canonical	3	26	junction_7	4.54877544232416	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTGTTGCTTCTGGG	4654	False	NA	NA	False	NA	NA	NA	94891636	94913934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
tx.23967	chr3	-	194	2	Antisense	novelGene_ENSMUSG00000098198.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCAGAGTTCATATGAC	NA	False	NA	NA	False	NA	NA	NA	95083648	95014872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr3_-_95015018_95083599
tx.23968	chr3	+	2406	3	FSM	ENSMUSG00000053769.6	ENSMUST00000066386.6	2394	3	-10	-2	-10	2	multi-exon	FALSE	canonical	1	7	junction_2	5.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTAGTGGTTTTATT	8601	False	NA	NA	False	NA	NA	NA	95041388	95046831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_95042308_95044935_95045298_95045706
tx.23969	chr3	+	4288	18	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	18	0	intron_retention	FALSE	canonical	3	22	junction_1	23.8240377578299	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	95067785	95081335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101
tx.2397	chr11	-	3881	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	20	-2029	20	1	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2900	False	NA	NA	False	NA	NA	NA	6015722	5919642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
tx.23970	chr3	-	8591	9	FSM	ENSMUSG00000038766.17	ENSMUST00000107209.8	8357	9	-234	0	-27	0	multi-exon	FALSE	canonical	3	10	junction_7	6.12244844812923	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTATTGTTGAATTCT	8749	False	NA	NA	False	NA	NA	NA	95125254	95089076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95123524_95123580_95124899
tx.23971	chr3	-	8558	8	NIC	ENSMUSG00000038766.17	novel	8661	10	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	6.73704349860091	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTATTGTTGAATTCT	8727	False	NA	NA	False	NA	NA	NA	95125276	95089076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95124899
tx.23972	chr3	-	8515	5	ISM	ENSMUSG00000038766.17	ENSMUST00000098873.11	8272	8	4365	-2	4365	2	3prime_fragment	FALSE	canonical	3	14	junction_4	4.81534007106456	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCAGTATTGTTGA	NA	False	NA	NA	False	NA	NA	NA	95111883	95089081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041
tx.23973	chr3	-	763	3	FSM	ENSMUSG00000068860.6	ENSMUST00000107197.2	1289	3	509	17	509	-17	multi-exon	FALSE	canonical	3	16	junction_2	7.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGCTAAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	95148400	95144434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95144541_95147260_95147423_95147905
tx.23974	chr3	+	1674	15	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	-12	189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.7207385357915	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGTGTGTTATTAACAA	NA	False	NA	NA	False	NA	NA	NA	95466975	95495171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_95467044_95468530_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
tx.23975	chr3	+	4649	6	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	14757	189	intron_retention	FALSE	canonical	3	219	junction_5	40.0729335087912	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGTGTGTTATTAACAA	502	False	NA	NA	False	NA	NA	NA	95481745	95495171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
tx.23976	chr3	-	3228	14	ISM	ENSMUSG00000015850.12	ENSMUST00000015994.4	3856	18	3721	-5	3721	2	3prime_fragment	FALSE	canonical	1	4	junction_7	6.63146524992379	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTCGTTATGTTCATG	NA	False	NA	NA	False	NA	NA	NA	95591448	95583508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942
tx.23977	chr3	-	3998	18	FSM	ENSMUSG00000015850.12	ENSMUST00000117782.8	4036	18	38	0	-14	0	multi-exon	TRUE	canonical	1	3	junction_17	6.21918006589627	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCTTCGTTATGTTCA	NA	False	NA	NA	False	NA	NA	NA	95595190	95583510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592982_95595131
tx.23978	chr3	-	7681	10	FSM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-191	8	40	-8	multi-exon	FALSE	canonical	3	28	junction_2	34.4318973563113	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTTGACATTTTTCT	9965	False	NA	NA	False	NA	NA	NA	95726135	95667660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
tx.23979	chr3	-	1503	7	NNC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	74.0954714465661	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95789545	95785811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266_95789365_95789466
tx.2398	chr11	-	4172	21	FSM	ENSMUSG00000057897.15	ENSMUST00000093355.12	1973	21	-173	-2026	-7	1	multi-exon	FALSE	canonical	3	14	junction_5	41.4625131896271	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2867	False	NA	NA	False	NA	NA	NA	6015755	5919642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
tx.23980	chr3	-	772	6	FSM	ENSMUSG00000038543.14	ENSMUST00000090476.10	809	6	50	-13	0	13	multi-exon	FALSE	canonical	3	27	junction_2	2.22710574513201	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAGAGTCTGTTCTAA	NA	False	NA	NA	False	NA	NA	NA	95799267	95791252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95799196
tx.23981	chr3	+	4076	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-86	-3975	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24.8562534049952	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAAAATTATTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	96011752	96064471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96011941_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
tx.23982	chr3	+	2719	17	NIC	ENSMUSG00000045934.16	novel	2778	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	2.24913177693082	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGTATTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	96069321	96079033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96069576_96069945_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078458
tx.23983	chr3	-	811	2	ISM	ENSMUSG00000074398.6	ENSMUST00000098839.3	659	3	18	-3	18	3	intron_retention	FALSE	canonical	2	2	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTTTTAAACCTTG	NA	False	NA	NA	False	NA	NA	NA	96465113	96463077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_96463377_96464601
tx.23984	chr3	+	1610	4	FSM	ENSMUSG00000028102.16	ENSMUST00000144962.8	2235	4	-14	639	-14	1	multi-exon	FALSE	canonical	3	9	junction_1	127.753234357839	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTATTCAATTCAA	NA	False	NA	NA	False	NA	NA	NA	96542677	96552043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_96542817_96543989_96544106_96544446_96544649_96550890
tx.23985	chr3	+	2743	15	NIC	ENSMUSG00000028101.19	novel	2858	14	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	47.4118408529053	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2598	False	NA	NA	False	NA	NA	NA	96603709	96613278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96603848_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
tx.23986	chr3	+	2477	10	NIC	ENSMUSG00000038298.15	novel	2406	9	NA	NA	4	-4	intron_retention	FALSE	canonical	1	2	junction_1	8.45175122477183	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTGGTAAAATCTATC	7110	False	NA	NA	False	NA	NA	NA	96736782	96778238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96736866_96737399_96737473_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
tx.23987	chr3	+	2396	9	NNC	ENSMUSG00000038298.15	novel	531	2	NA	NA	-9	-11	intron_retention	FALSE	canonical	1	1	junction_1	8.68907359849138	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAATCTATTTGGTAAA	NA	False	NA	NA	False	NA	NA	NA	96740532	96778231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_96740615_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
tx.23988	chr3	+	2239	9	NIC	ENSMUSG00000038298.15	novel	531	2	NA	NA	12	1	intron_retention	FALSE	canonical	2	4	junction_1	7.93626958967499	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCTGTTATAGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	96740553	96777789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96740921_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
tx.23989	chr3	-	4557	14	NIC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	2	14	intron_retention	FALSE	canonical	1	1	junction_10	41.6774029560356	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGTCACTGAATGTCATG	1899	False	NA	NA	False	NA	NA	NA	96812626	96775582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800832_96800921_96804648_96804753_96805807_96805868_96812497
tx.2399	chr11	-	4014	20	NIC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	16	1	intron_retention	FALSE	canonical	3	32	junction_5	33.5580697347349	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2896	False	NA	NA	False	NA	NA	NA	6015726	5919642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
tx.23990	chr3	+	1911	2	FSM	ENSMUSG00000042035.12	ENSMUST00000198995.5	1855	2	-29	-27	-29	27	multi-exon	FALSE	canonical	3	79	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTGCTTCGCAACAT	223	False	NA	NA	False	NA	NA	NA	101284369	101286883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_101284519_101285121
tx.23991	chr3	+	7228	11	FSM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	-73	216	-73	-216	multi-exon	FALSE	canonical	2	14	junction_5	19.1627242322171	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTTTACATTTTCTGGA	179	False	NA	NA	False	NA	NA	NA	101284325	101370159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
tx.23992	chr3	+	4433	4	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	73944	2	72689	-2	3prime_fragment	FALSE	canonical	3	26	junction_1	2.86744175568088	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTTGCCACATGCTG	NA	False	NA	NA	False	NA	NA	NA	101358342	101370373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_101358611_101362420_101362829_101364938_101365425_101367102
tx.23993	chr3	+	4170	3	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	78019	0	76764	0	3prime_fragment	FALSE	canonical	3	29	junction_2	2	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTGCCACATGCTGAA	NA	False	NA	NA	False	NA	NA	NA	101362417	101370375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_101362829_101364938_101365425_101367102
tx.23994	chr3	-	2963	7	FSM	ENSMUSG00000044313.14	ENSMUST00000061831.11	3558	7	-10	605	-10	2	multi-exon	FALSE	canonical	0	0	junction_4	1.34370962471642	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTGGTTTCATGTGAT	NA	False	NA	NA	False	NA	NA	NA	101743549	101720996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_101722569_101725938_101726134_101726681_101726861_101730555_101730848_101734046_101734188_101742309_101742581_101743236
tx.23995	chr3	-	5838	7	NIC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	84	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	97.1522287729703	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCATAGTGCAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	102111925	102060899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102096724_102096864_102104107_102104293_102111827
tx.23996	chr3	-	4249	9	NIC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	2	815	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	80.6907677494768	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTCATAGCCTACTCT	NA	False	NA	NA	False	NA	NA	NA	102112007	102063217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
tx.23997	chr3	-	8000	16	NNC	ENSMUSG00000008730.18	novel	4185	16	NA	NA	-57	-4	intron_retention	FALSE	canonical	2	7	junction_9	22.5845571624113	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGGCTGGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	103698648	103647134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667912_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
tx.23998	chr3	-	3572	15	ISM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-52	1488	-33	8	5prime_fragment	FALSE	canonical	2	67	junction_8	11.1302584453922	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAACCTCTGGTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	103698624	103652463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
tx.23999	chr3	-	7342	19	NNC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.596306492951	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATTCTCTGGTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	104419223	104361300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104383345_104383527_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
tx.24	chr1	-	4998	15	FSM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	-379	-2126	-194	4	multi-exon	FALSE	canonical	1	5	junction_9	10.6999904634709	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTTGGCATTGCTCAT	NA	False	NA	NA	False	NA	NA	NA	9770628	9737635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
tx.240	chr1	-	2009	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	11	339	11	0	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	311	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	False	NA	NA	False	NA	NA	NA	44157957	44146044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
tx.2400	chr11	-	3410	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	224	293	224	2	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	585	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTTCTGTCTGTGACA	9682	False	NA	NA	False	NA	NA	NA	6150191	6055983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
tx.24000	chr3	+	3242	7	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	25	0	intron_retention	FALSE	canonical	3	74	junction_6	11.0063113207327	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	NA	NA	NA	104688396	104693334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692336_104692501_104692610_104692713
tx.24001	chr3	+	1835	14	FSM	ENSMUSG00000045576.17	ENSMUST00000106769.8	2428	14	573	20	-4	-20	multi-exon	FALSE	canonical	3	3	junction_11	18.8082821993382	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATACAATTTTTCTTT	653	False	NA	NA	False	NA	NA	NA	104772391	104834156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826762_104826818_104829502_104829596_104833745
tx.24002	chr3	+	2204	9	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	3	17	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	37.0506410200957	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGTAAAGTTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	106455149	106482178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_106455237_106459471_106459597_106462482_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
tx.24003	chr3	+	2114	8	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	42.6375325701836	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	False	NA	NA	False	NA	NA	NA	106455157	106482161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_106455237_106459471_106459597_106462479_106462625_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
tx.24004	chr3	-	1306	8	FSM	ENSMUSG00000004035.13	ENSMUST00000004137.11	1377	8	71	0	71	0	multi-exon	FALSE	canonical	1	5	junction_6	2.49897938350513	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTTTGGTCGG	NA	False	NA	NA	False	NA	NA	NA	107839062	107833649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107834297_107836185_107836297_107836378_107836475_107837589_107837691_107837788_107837871_107838143_107838209_107838630_107838707_107838934
tx.24005	chr3	-	1492	8	FSM	ENSMUSG00000027890.18	ENSMUST00000106670.2	777	8	16	-731	9	2	multi-exon	FALSE	canonical	3	28	junction_7	31.2429583903252	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGTCTTTTCCTACCA	NA	False	NA	NA	False	NA	NA	NA	107952166	107947721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952125
tx.24006	chr3	-	3791	18	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-32	0	intron_retention	FALSE	canonical	3	124	junction_17	34.3116189829602	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	107993999	107981377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
tx.24007	chr3	+	5023	2	FSM	ENSMUSG00000050947.10	ENSMUST00000106656.2	5482	2	-50	509	-27	0	multi-exon	FALSE	canonical	2	8	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTGGTTGGTTTATT	509	False	NA	NA	False	NA	NA	NA	108093623	108099093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108093995_108094441
tx.24008	chr3	-	4033	3	NNC	ENSMUSG00000048796.8	novel	4275	3	NA	NA	165	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGATGCTATGCTCTG	NA	False	NA	NA	False	NA	NA	NA	108107746	108103094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_108107032_108107440_108107479_108107688
tx.24009	chr3	+	2876	21	FSM	ENSMUSG00000068747.15	ENSMUST00000135636.6	6836	21	4	3956	4	-3951	multi-exon	FALSE	canonical	2	6	junction_17	14.3960932200372	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTTTGTAAGACT	4984	False	NA	NA	False	NA	NA	NA	108191401	108264803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108262787_108262887_108263546_108263654_108263892_108264005_108264544
tx.2401	chr11	-	1921	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	29	6	3	-6	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	1117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGGTGGTGTTGTCTG	4518	False	NA	NA	False	NA	NA	NA	6217743	6208924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
tx.24010	chr3	-	4906	6	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	-11	0	intron_retention	FALSE	canonical	3	86	junction_2	145.648343622576	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6839	False	NA	NA	False	NA	NA	NA	108819054	108810122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_108812079_108812426_108812651_108813233_108815164_108815247_108815400_108815651_108815721_108818479
tx.24011	chr3	-	5763	11	FSM	ENSMUSG00000040339.11	ENSMUST00000171143.2	5702	11	-61	0	-61	0	multi-exon	FALSE	canonical	1	2	junction_4	2.6153393661244	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTCTTAAGATTTTACT	NA	False	NA	NA	False	NA	NA	NA	108934984	108878312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108882659_108886160_108886231_108886996_108887125_108887390_108887611_108888459_108888556_108892627_108892732_108895626_108895674_108899941_108900059_108904350_108904381_108910615_108910737_108934500
tx.24012	chr3	-	2012	12	NIC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	11	4	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	44.0480579022353	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTGAGGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	116388525	116374737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116384053_116384206_116385841_116385909_116386112_116386160_116388287
tx.24014	chr3	-	3728	4	NIC	ENSMUSG00000028133.18	novel	1484	5	NA	NA	0	-5	intron_retention	FALSE	canonical	3	77	junction_3	12.657891697365	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGGACTCTTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	120965344	120949053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_120949707_120949835_120949952_120950049_120952905_120965240
tx.24015	chr3	-	4234	3	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGATCATGCTTCCCA	NA	False	NA	NA	False	NA	NA	NA	121353594	121348648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr3_-_121349399_121349576_121349714_121350247
tx.24016	chr3	+	4961	22	NIC	ENSMUSG00000039831.17	novel	5787	23	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.69331555346045	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGGTTCTTATGGCTT	NA	False	NA	NA	False	NA	NA	NA	121746869	121809805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_121747054_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
tx.24017	chr3	-	5714	16	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	46	-313	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	12.6673684016145	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTATAGCTGGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	122778074	122725454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756595_122757903_122757997_122762237_122762899_122777930
tx.24018	chr3	-	7889	43	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	19998	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	8.36717617767241	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGCAGTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	126898513	126715262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770582_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409
tx.24019	chr3	+	1868	11	NIC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	-1	1034	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	33.6964389809962	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCTTTATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	135053793	135099878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
tx.2402	chr11	-	1866	14	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	280.168482699651	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGGTGGTGTTGTCTG	4519	False	NA	NA	False	NA	NA	NA	6217742	6208924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216918_6217417_6217580_6217659
tx.24020	chr3	+	1486	4	FSM	ENSMUSG00000050150.17	ENSMUST00000160047.8	1196	4	-38	-252	-21	13	multi-exon	FALSE	canonical	3	81	junction_1	29.6348143611905	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTTTTTTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	135053768	135064080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217
tx.24021	chr3	-	4286	20	NNC	ENSMUSG00000028158.15	novel	3072	20	NA	NA	-14	-1	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_14	5.05043812037691	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCTTTTGTCTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	137849163	137795615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810546_137810699_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818_137831007_137839760_137839897_137844662_137844758_137848932
tx.24022	chr3	+	2439	8	NNC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-19	-1550	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	63.2442624646211	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTGTACTTTTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	137849602	137864029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_137849719_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
tx.24023	chr3	-	4911	12	ISM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	3841	-1	-2	1	3prime_fragment	FALSE	canonical	3	150	junction_4	21.9560040923315	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGCCTGGCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	142097613	141945349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473
tx.24024	chr3	+	1084	5	ISM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	13145	21	12967	-21	3prime_fragment	FALSE	canonical	3	174	junction_4	17.8518206354422	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTTAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	142483950	142489346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
tx.24025	chr3	-	5495	5	ISM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	116145	-6	115845	6	3prime_fragment	FALSE	canonical	3	89	junction_1	14.1686273153048	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTAGTATGCGCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	144159797	144135460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712
tx.24026	chr3	+	1924	3	NIC	ENSMUSG00000036873.14	novel	514	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	74	junction_2	13.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTTAGCATCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	145643767	145650584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_145644425_145644652_145644852_145649516
tx.24027	chr3	+	3439	2	ISM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	364	29	62	-4	3prime_fragment	FALSE	canonical	3	3573	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTGGCCTCCTTACT	NA	False	NA	NA	False	NA	NA	NA	146205925	146211298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_146209155_146211088
tx.24028	chr3	-	2484	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	-32	7	-32	-7	multi-exon	TRUE	canonical	3	8	junction_3	4.18993502999218	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGAGTCCTATAGTCTT	NA	False	NA	NA	False	NA	NA	NA	151915752	151889625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
tx.24029	chr3	+	2601	3	FSM	ENSMUSG00000028182.15	ENSMUST00000195418.6	2148	3	-13	-440	-13	440	multi-exon	FALSE	canonical	2	4	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTTGACCCTGATTC	2772	False	NA	NA	False	NA	NA	NA	154799057	154808703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_154799308_154804341_154804591_154806601
tx.2403	chr11	-	1985	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	16	2	11	-2	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	367	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAATTCTCCCTTTGTT	5354	False	NA	NA	False	NA	NA	NA	6224854	6220370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
tx.24030	chr4	-	2417	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	44	229	0	-229	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAATGTTATTCTTGAG	-11	True	NA	NA	False	NA	NA	NA	3574809	3549269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
tx.24031	chr4	+	3248	2	ISM	ENSMUSG00000042198.13	ENSMUST00000119403.2	695	3	-1987	2	-21	0	intron_retention	FALSE	canonical	3	436	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	3938866	3943523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_3941312_3942720
tx.24032	chr4	-	5647	2	ISM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	23886	0	23886	0	3prime_fragment	FALSE	canonical	3	173	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGCTGTGTTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	4769469	4762483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_4767973_4769311
tx.24034	chr4	+	4931	9	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	7	-1788	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_3	55.7808210767823	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGTTTTTATTGAAA	-3	True	NA	NA	False	NA	NA	NA	6191104	6219900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_6191214_6196410_6196515_6198000_6198085_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
tx.24035	chr4	+	10392	38	NIC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	-187	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.8081165825718	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTAGTTATAGAATG	96	False	NA	NA	False	NA	NA	NA	8691177	8867651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_8691435_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
tx.24036	chr4	+	4779	8	NIC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	-182	1093	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	9.84782167977948	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTCTGTTTACTGGAA	847	False	NA	NA	False	NA	NA	NA	8855048	8868752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
tx.24037	chr4	-	4313	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-16	-2207	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	124.607715028517	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	-12	True	NA	NA	False	NA	NA	NA	9669102	9451285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
tx.24038	chr4	-	4088	2	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTTTCATGTTTCCT	9971	False	NA	NA	False	NA	NA	NA	11181252	11175961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_11178675_11179877
tx.24039	chr4	-	5081	2	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTTTCATGTTTCCT	6395	False	NA	NA	False	NA	NA	NA	11184828	11175961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_11178675_11182460
tx.2404	chr11	+	4125	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	6241622	6306642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
tx.24040	chr4	-	3636	3	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	2	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTTTCATGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	11191285	11175961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_11178675_11182460_11183243_11191144
tx.24041	chr4	+	2624	12	FSM	ENSMUSG00000028212.17	ENSMUST00000029866.16	3006	12	57	325	47	-221	multi-exon	FALSE	canonical	3	47	junction_2	64.9822607707368	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTAACTGCTTAAAAGT	0	True	NA	NA	False	NA	NA	NA	11191782	11204454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_11191816_11192680_11192718_11192817_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
tx.24042	chr4	-	3725	14	NIC	ENSMUSG00000040728.16	novel	3864	16	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	2.77776462850274	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCGCACTCTTCTTCTT	7099	False	NA	NA	False	NA	NA	NA	11386801	11331933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_11333474_11353294_11353464_11357459_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
tx.24043	chr4	-	3908	15	NIC	ENSMUSG00000040728.16	novel	3864	16	NA	NA	-92	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.51382110749967	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCGCACTCTTCTTCT	7025	False	NA	NA	False	NA	NA	NA	11386875	11331934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_11333474_11338721_11338832_11353294_11353464_11357459_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
tx.24044	chr4	+	2311	5	FSM	ENSMUSG00000028214.14	ENSMUST00000108304.9	2006	5	-61	-244	-61	244	multi-exon	FALSE	canonical	1	1	junction_2	2.17944947177034	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGATTGTCCTTCTACTTT	9557	False	NA	NA	False	NA	NA	NA	11704395	11714996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_11704567_11705904_11706242_11711138_11711216_11711969_11712175_11713475
tx.24045	chr4	+	6273	2	NIC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	16	28	intron_retention	FALSE	canonical	3	62	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	72	False	NA	NA	False	NA	NA	NA	12089456	12096271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_12092573_12093114
tx.24046	chr4	+	3495	11	FSM	ENSMUSG00000006586.16	ENSMUST00000006761.10	5783	11	-244	2532	-244	0	multi-exon	FALSE	canonical	0	0	junction_1	2.05182845286832	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	399	False	NA	NA	False	NA	NA	NA	13743191	13891117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_13743730_13835632_13835771_13837759_13838002_13841797_13841888_13846775_13846958_13859810_13860062_13865200_13865287_13865830_13866033_13875476_13875546_13881049_13881241_13889611
tx.24047	chr4	-	4869	13	FSM	ENSMUSG00000040536.16	ENSMUST00000041606.14	4922	13	52	1	52	-1	multi-exon	FALSE	canonical	2	6	junction_1	6.35249294896631	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAATTTGTATTTATTC	685	False	NA	NA	False	NA	NA	NA	15149079	14952245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_14955922_14957825_14957918_14960007_14960086_14965905_14966019_14975132_14975187_14978154_14978232_14989157_14989280_15004968_15005106_15052619_15052718_15065323_15065350_15111193_15111303_15140224_15140250_15148817
tx.24048	chr4	-	2709	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	47.7518586025717	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGTGTGAACACTGA	-6	True	NA	NA	False	NA	NA	NA	16013851	15997225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013493
tx.24049	chr4	+	1477	8	ISM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-139	3673	-94	-3673	5prime_fragment	FALSE	canonical	3	44	junction_7	8.46601850858803	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTGTTGCTTTCCTGT	-4	True	NA	NA	False	NA	NA	NA	19575067	19603259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642
tx.2405	chr11	+	4136	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-9	0	-9	0	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	1094	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	6241623	6306642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
tx.24050	chr4	+	5223	7	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	8542	3	8530	-3	3prime_fragment	FALSE	canonical	3	256	junction_6	83.0194087079776	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTTAGTTTTCTGGAT	8537	False	NA	NA	False	NA	NA	NA	21736296	21747959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
tx.24051	chr4	+	5806	17	FSM	ENSMUSG00000040455.18	ENSMUST00000040429.12	5861	17	-17	72	-6	-70	multi-exon	FALSE	canonical	3	5	junction_12	7.05226027596827	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATTAGGCCTAGAGTT	9076	False	NA	NA	False	NA	NA	NA	21776254	21837800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
tx.24052	chr4	+	2480	9	FSM	ENSMUSG00000040410.15	ENSMUST00000184455.8	2478	9	1	-3	1	0	multi-exon	FALSE	canonical	2	4	junction_4	22.7156333832011	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-10	True	NA	NA	False	NA	NA	NA	22357571	22434091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390713_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
tx.24053	chr4	-	2387	11	NNC	ENSMUSG00000040387.17	novel	7143	11	NA	NA	2	38	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	2.96816441593117	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCGAGAATTTTGTCACT	11	True	NA	NA	False	NA	NA	NA	24851084	24617234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_24617547_24626896_24626992_24629159_24629353_24632642_24632702_24649539_24650267_24682054_24682236_24708952_24709052_24743857_24743966_24792616_24792798_24800805_24800891_24850737
tx.24054	chr4	-	2723	19	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_18	50.3518790949758	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACTTGTTTGTTATTT	-4	True	NA	NA	False	NA	NA	NA	25281819	25250146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280720_25281675
tx.24055	chr4	-	5377	4	NNC	ENSMUSG00000055373.9	novel	12134	3	NA	NA	1	2980	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.7521042876493	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACTTCTTAGAATTC	-28	True	NA	NA	False	NA	NA	NA	25799854	25615917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_25620821_25709027_25709115_25755552_25755674_25799588
tx.24056	chr4	-	4816	5	NNC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	183	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	25.7815340893439	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGGAAATCTATTCATT	-15	True	NA	NA	False	NA	NA	NA	26346671	26324508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346424
tx.24059	chr4	+	2890	5	FSM	ENSMUSG00000054679.9	ENSMUST00000108159.2	829	5	-11	-2050	-11	3	multi-exon	FALSE	canonical	2	4	junction_3	2.44948974278318	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATGTGCTGTCCTGA	6	True	NA	NA	False	NA	NA	NA	33209251	33233343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_33209371_33223567_33223673_33225764_33225869_33226027_33226170_33230923
tx.2406	chr11	+	4373	23	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	139.064294839378	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	6241984	6306642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
tx.24060	chr4	-	2960	12	NNC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	27.2466542035762	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	-34	False	NA	NA	False	NA	NA	NA	35225857	35191286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218587_35218796_35218917_35225787
tx.24061	chr4	-	2587	2	FSM	ENSMUSG00000028438.17	ENSMUST00000131532.2	1151	2	22	-1458	-17	1458	multi-exon	FALSE	canonical	3	4	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATCTGATTTTATTTTA	-11	True	NA	NA	False	NA	NA	NA	41464865	41452931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41455363_41464709
tx.24062	chr4	-	2145	10	NNC	ENSMUSG00000028444.18	novel	1995	10	NA	NA	-78	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2.26077666104176	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGGAGCTGAACCACT	NA	False	NA	NA	False	NA	NA	NA	41695523	41657499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_41658153_41658240_41658410_41658780_41658962_41661972_41662137_41663201_41663369_41663539_41663658_41670842_41671077_41675019_41675105_41686796_41686887_41695239
tx.24063	chr4	-	3831	5	ISM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	19	149	12	-149	intron_retention	FALSE	canonical	3	881	junction_4	34.6220666627514	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	3	True	NA	NA	False	NA	NA	NA	41723151	41714946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836
tx.24064	chr4	-	607	6	FSM	ENSMUSG00000073888.14	ENSMUST00000108037.9	590	6	-25	8	2	3	multi-exon	FALSE	canonical	3	53	junction_3	16.7020956768904	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAAACTTCCGTCTCTT	3	True	NA	NA	False	NA	NA	NA	41774167	41769474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464_41773525_41773735_41773804_41774099
tx.24065	chr4	-	2814	5	NIC	ENSMUSG00000073888.14	novel	590	6	NA	NA	0	-5	intron_retention	FALSE	canonical	3	80	junction_4	9.06917857360853	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCCGTCTCTTTTA	28	False	NA	NA	False	NA	NA	NA	41774142	41769471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_41769655_41769843_41769977_41771137_41773525_41773735_41773804_41774099
tx.24066	chr4	+	3761	9	NIC	ENSMUSG00000028458.13	novel	3947	10	NA	NA	327	-3	intron_retention	FALSE	canonical	3	35	junction_3	6.50840802347241	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGACTGTCATTAGCT	-10	True	NA	NA	False	NA	NA	NA	43442265	43448061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
tx.24067	chr4	+	887	5	FSM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	-22	0	5	0	multi-exon	FALSE	canonical	3	315	junction_4	11.5433963806152	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-21	True	NA	NA	False	NA	NA	NA	43493366	43495921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508
tx.24068	chr4	+	4520	12	ISM	ENSMUSG00000078716.11	ENSMUST00000107866.9	5102	13	4443	4	-511	-4	3prime_fragment	FALSE	canonical	2	4	junction_8	2.51606409147237	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCTACTCCTTCCCTT	4276	False	NA	NA	False	NA	NA	NA	43673948	43692664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690026
tx.24069	chr4	-	4600	6	FSM	ENSMUSG00000035696.16	ENSMUST00000148869.8	848	6	-458	-3294	176	-2	multi-exon	FALSE	canonical	3	65	junction_2	7.22772439983706	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGTGTTTCATGTAAGG	9685	False	NA	NA	False	NA	NA	NA	44139410	44126211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669
tx.2407	chr11	+	4112	20	FSM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	1	3	1	-3	multi-exon	TRUE	canonical	3	65	junction_1	72.0482679083075	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCAAGCTCAGGATATC	4624	False	NA	NA	False	NA	NA	NA	6339074	6356155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
tx.24070	chr4	-	5180	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	22.9112553090116	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAAGTCGTGTTTCATGT	4	True	NA	NA	False	NA	NA	NA	44167994	44126215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44159004_44159053_44167626
tx.24071	chr4	-	5364	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	25.3178145884907	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACCTAAGTCGTGTTTC	21	True	NA	NA	False	NA	NA	NA	44167919	44126219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167465
tx.24072	chr4	+	2352	16	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	56	-379	combination_of_known_splicesites	FALSE	canonical	2	9	junction_8	119.239926199239	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGACTATTTGGAGTGT	12	True	NA	NA	False	NA	NA	NA	44300931	44364296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
tx.24073	chr4	+	3037	9	NIC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	3	957	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	97.061755470422	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTCCTTTTCTGGAAT	-5	True	NA	NA	False	NA	NA	NA	45297157	45317088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308449_45308565_45314282_45314407_45315011
tx.24074	chr4	-	4118	16	FSM	ENSMUSG00000066191.13	ENSMUST00000229609.2	3438	16	86	-766	-35	307	multi-exon	FALSE	canonical	1	1	junction_8	1.85711843695788	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGTTTGTTTATAGTG	-15	True	NA	NA	False	NA	NA	NA	47057341	47015361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_47016817_47017522_47017620_47023743_47023861_47025685_47025754_47027100_47027285_47030663_47030852_47033115_47033270_47035715_47035920_47038913_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47049068_47049572_47056948
tx.24075	chr4	+	5613	17	FSM	ENSMUSG00000028344.13	ENSMUST00000030029.10	5633	17	22	-2	-2	2	multi-exon	FALSE	canonical	1	2	junction_6	2.59506743650334	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTGATGCCTTTATTC	0	True	NA	NA	False	NA	NA	NA	48279823	48431956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
tx.24076	chr4	+	1532	2	ISM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	11877	-1	-7571	1	3prime_fragment	FALSE	canonical	3	304	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTACACTGTGTATGTTT	NA	False	NA	NA	False	NA	NA	NA	48552375	48561920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_48552831_48560843
tx.24077	chr4	+	7096	8	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25147	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	4.94871659305393	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTCCATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	53668426	53707008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_53668674_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
tx.24078	chr4	+	1457	2	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	35422	1034	35375	-1034	3prime_fragment	FALSE	canonical	3	1164	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCACAGTGTTGGCTTT	7132	False	NA	NA	False	NA	NA	NA	55385464	55391203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_55385602_55389883
tx.24079	chr4	-	6831	24	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-284	-10	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	61.9360301734652	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGAAATTAAATGCTT	-16	True	NA	NA	False	NA	NA	NA	57143721	56991981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_56995804_56999581_56999728_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
tx.2408	chr11	+	3955	20	NIC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	4	23	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	82.0795843784869	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGTCTGTGGCCTTTCT	4627	False	NA	NA	False	NA	NA	NA	6339077	6356097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
tx.24080	chr4	-	5037	13	ISM	ENSMUSG00000038764.15	ENSMUST00000075637.11	6369	26	69344	8	-10439	-8	3prime_fragment	FALSE	canonical	3	38	junction_6	8.86119818835655	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACACTGTTCTTGTCTGTC	8703	False	NA	NA	False	NA	NA	NA	57232493	57190848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321
tx.24081	chr4	-	6356	27	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	22	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	15.5681361731366	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAACACTGTTCTTGTCTG	-12	True	NA	NA	False	NA	NA	NA	57300353	57190850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57271739_57271830_57300280
tx.24082	chr4	-	4297	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-59	-2129	combination_of_known_junctions	FALSE	canonical	2	9	junction_25	11.3804042107475	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGTATTTTTAAATAGC	-20	True	NA	NA	False	NA	NA	NA	57300815	57192969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300592
tx.24083	chr4	+	4628	3	NIC	ENSMUSG00000038729.25	novel	7231	5	NA	NA	15428	-2123	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	7	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGTTTTTATGTTA	NA	False	NA	NA	False	NA	NA	NA	57757522	57894859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_57757684_57854561_57857038_57892868
tx.24084	chr4	+	4635	3	NIC	ENSMUSG00000038729.25	novel	7172	3	NA	NA	-25	-2123	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGTTTTTATGTTA	-15	True	NA	NA	False	NA	NA	NA	57782154	57894859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_57782323_57854561_57857038_57892868
tx.24085	chr4	+	4552	3	NNC	ENSMUSG00000038729.25	novel	6650	3	NA	NA	2	-2121	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	7	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTTTATGTTATT	-3	True	NA	NA	False	NA	NA	NA	57845249	57894861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_57845333_57854561_57857038_57892868
tx.24086	chr4	-	6547	12	ISM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	31615	3	-3401	-3	3prime_fragment	FALSE	canonical	3	119	junction_2	22.4823162831267	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTTTTTCTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	59517749	59471870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585
tx.24087	chr4	+	927	7	FSM	ENSMUSG00000078689.9	ENSMUST00000107521.8	642	7	-134	-151	-134	-3	multi-exon	FALSE	canonical	3	12	junction_2	4.92442890089805	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTCTCTGTGTCC	23	False	NA	NA	False	NA	NA	NA	59964159	60007271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_59964368_60003977_60004112_60004813_60004888_60005471_60005583_60005921_60006024_60006188_60006235_60007019
tx.24088	chr4	-	2224	4	FSM	ENSMUSG00000066151.13	ENSMUST00000131977.2	1739	4	-105	-380	-26	380	multi-exon	FALSE	canonical	3	72	junction_2	12.5698050899765	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAACAATTATATTGTAA	6890	False	NA	NA	False	NA	NA	NA	62278811	62261993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62263815_62264293_62264379_62270669_62270783_62278606
tx.24089	chr4	-	2317	10	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	2	31	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	61.169063430689	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTTAGGCCTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	62389131	62370837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
tx.2409	chr11	+	4195	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	1	3	1	-3	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	318	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCAAGCTCAGGATATC	4914	False	NA	NA	False	NA	NA	NA	6339364	6356155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
tx.24090	chr4	-	2535	11	NIC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	58.0241329103676	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389131	62370868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388969
tx.24091	chr4	-	3696	9	NNC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	-52	-2333	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15.1739909054935	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAATTCAGAGGACAGCA	4426	False	NA	NA	False	NA	NA	NA	63414280	63346281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_63347356_63347471_63347655_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
tx.24092	chr4	-	3534	8	ISM	ENSMUSG00000039137.19	ENSMUST00000084510.8	4049	13	-117	13139	-77	-2337	5prime_fragment	FALSE	canonical	3	5	junction_1	13.763305250868	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTGGAATTCAGAGGAC	4401	False	NA	NA	False	NA	NA	NA	63414305	63346285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_63347356_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
tx.24093	chr4	-	890	2	Genic_Genomic	ENSMUSG00000046341.6	novel	450	1	NA	NA	-91	451	multi-exon	FALSE	canonical	2	29	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTATAAGGGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	69844407	69843415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr4_-_69844194_69844295
tx.24094	chr4	+	706	2	Antisense	novelGene_ENSMUSG00000028399.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAATGTTTAGCATTTC	NA	False	NA	NA	False	NA	NA	NA	77228927	77232614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_77229411_77232391
tx.24095	chr4	-	2613	9	FSM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	-70	5886	-68	-14	multi-exon	FALSE	canonical	3	11	junction_1	6.11861912526021	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAAGAAAAATAGGG	NA	False	NA	NA	False	NA	NA	NA	82423615	82214298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
tx.24096	chr4	-	5735	12	FSM	ENSMUSG00000008575.18	ENSMUST00000107247.8	3267	12	-55	-2413	2	2413	multi-exon	FALSE	canonical	2	8	junction_3	6.85987253815036	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCATTTAATAGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	82423999	82211871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241808_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
tx.24097	chr4	-	3116	8	FSM	ENSMUSG00000008575.18	ENSMUST00000122918.8	2699	8	-450	33	4	-33	multi-exon	FALSE	canonical	3	16	junction_3	4.89064079103534	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	82423997	82245094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
tx.24098	chr4	-	5029	2	FSM	ENSMUSG00000008575.18	ENSMUST00000135024.2	3835	2	-54	-1140	-54	1140	multi-exon	FALSE	canonical	3	26	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGGACAGATTAAGGAA	NA	False	NA	NA	False	NA	NA	NA	82424070	82413080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_82417007_82422967
tx.24099	chr4	-	3862	8	NIC	ENSMUSG00000028487.19	novel	3948	7	NA	NA	-17	-5	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	2.84999104903714	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	84593340	84193621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_84194685_84196142_84196177_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
tx.241	chr1	-	2138	9	FSM	ENSMUSG00000026047.14	ENSMUST00000141125.8	2085	9	-53	0	2	0	multi-exon	FALSE	canonical	3	275	junction_5	36.3145976158349	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	False	NA	NA	False	NA	NA	NA	44157966	44146044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
tx.2410	chr11	+	4103	20	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	118	junction_4	67.0811721462118	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCAAGCTCAGGATATC	4910	False	NA	NA	False	NA	NA	NA	6339360	6356155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
tx.24100	chr4	-	3805	7	FSM	ENSMUSG00000008489.19	ENSMUST00000008633.15	3730	7	2	-77	2	77	multi-exon	FALSE	canonical	0	0	junction_6	42.0571700849636	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTACTCTCTTTAATGAA	NA	False	NA	NA	False	NA	NA	NA	91260289	91138922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_91141808_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
tx.24101	chr4	-	2684	6	NNC	ENSMUSG00000087128.8	novel	925	5	NA	NA	-32	1558	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	4.63033476111609	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCAAGTGGTAATATGAA	NA	False	NA	NA	False	NA	NA	NA	94365449	94347609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_94349593_94350122_94350292_94352666_94352793_94353653_94353778_94356020_94356103_94365249
tx.24102	chr4	+	4723	23	FSM	ENSMUSG00000006386.16	ENSMUST00000102798.8	4654	23	-70	1	-59	-1	multi-exon	FALSE	canonical	1	2	junction_15	3.20027116619671	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCCCAGGATTGTGTC	211	False	NA	NA	False	NA	NA	NA	94627466	94763175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94699524_94699654_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
tx.24103	chr4	+	7453	20	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	45	-3	intron_retention	FALSE	canonical	3	114	junction_6	16.0945957103722	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTCTGCTTCTGA	4759	False	NA	NA	False	NA	NA	NA	95855521	95913625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
tx.24104	chr4	-	2683	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	1	66	combination_of_known_splicesites	FALSE	canonical	3	12	junction_6	80.1386553520375	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTGGTTTCAAATGTGA	NA	False	NA	NA	False	NA	NA	NA	99717370	99653572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99702294_99702338_99717319
tx.24105	chr4	-	5063	26	NIC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_25	50.7832413301869	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	101122431	101009563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101054972_101055178_101122238
tx.24106	chr4	-	2666	2	ISM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	959	0	959	0	3prime_fragment	FALSE	canonical	3	464	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCTTCTTGATGT	NA	False	NA	NA	False	NA	NA	NA	101750027	101747216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_101747741_101747885
tx.24107	chr4	+	4932	15	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	50.6150437425596	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTGTGGTGTCTAGT	2888	False	NA	NA	False	NA	NA	NA	102971962	103022948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_102972190_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
tx.24108	chr4	+	5394	17	NNC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	20.376150274279	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTAGCCTGGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	104224767	104602039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104538794_104538861_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266_104589378_104598709
tx.24109	chr4	+	5956	31	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	80982	-4	-31277	4	3prime_fragment	FALSE	canonical	3	78	junction_4	18.8850617037794	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGAGTCTCACAGACT	NA	False	NA	NA	False	NA	NA	NA	106254412	106298523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
tx.2411	chr11	+	7128	19	ISM	ENSMUSG00000041164.16	ENSMUST00000109786.8	4319	21	2491	84	2491	0	3prime_fragment	FALSE	canonical	3	220	junction_3	42.3571309605582	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	7511	False	NA	NA	False	NA	NA	NA	6341961	6356074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
tx.24110	chr4	-	1741	4	FSM	ENSMUSG00000028610.17	ENSMUST00000069271.5	1861	4	117	3	117	-3	multi-exon	FALSE	canonical	3	6	junction_2	4.18993502999218	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTGTGAAAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	107541310	107533491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_107534267_107536449_107536673_107537842_107538052_107540776
tx.24111	chr4	+	2040	4	FSM	ENSMUSG00000028613.16	ENSMUST00000238405.2	737	4	-90	-1213	37	202	multi-exon	FALSE	canonical	3	85	junction_2	7.71722460186015	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGCCCTATTGGGCTCG	NA	False	NA	NA	False	NA	NA	NA	107659397	107701891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412
tx.24112	chr4	+	4007	14	ISM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	317	10790	22	-969	5prime_fragment	FALSE	canonical	3	45	junction_4	17.5829395526917	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGGCTTTTACGTGCCT	NA	False	NA	NA	False	NA	NA	NA	107659382	107720305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329
tx.24113	chr4	+	4261	18	NIC	ENSMUSG00000028613.16	novel	3497	20	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	26.5350848245035	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATAGAATTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	107659368	107731095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107705477_107705601_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
tx.24114	chr4	+	3043	11	FSM	ENSMUSG00000008932.11	ENSMUST00000106713.5	3007	11	-43	7	-43	-1	multi-exon	TRUE	canonical	0	0	junction_7	1.32664991614216	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGGATGTGACAGACTA	2351	False	NA	NA	False	NA	NA	NA	107825485	107870722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_107825908_107834800_107834881_107850135_107850352_107859373_107859417_107861466_107861687_107864686_107864787_107865337_107865572_107866875_107867071_107867566_107867702_107868089_107868193_107869427
tx.24115	chr4	-	931	9	NNC	ENSMUSG00000028603.16	novel	855	8	NA	NA	-9	14	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	123.124682740708	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCAGTGCAGCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	107975738	107948186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_107948350_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
tx.24116	chr4	-	5658	13	NIC	ENSMUSG00000034645.15	novel	2421	14	NA	NA	-20	1495	intron_retention	FALSE	canonical	1	26	junction_7	15.5051514736949	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCATCCCTTTTCTTTC	5523	False	NA	NA	False	NA	NA	NA	108075265	108037439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
tx.24117	chr4	-	8547	13	NIC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	-29	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	38.29590564132	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAAGTGTGGTCTACTT	NA	False	NA	NA	False	NA	NA	NA	108158322	108086927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108158087
tx.24118	chr4	-	5582	10	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	11	1664	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	175.921138336416	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTAGTATGGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	108436522	108418704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430804_108432565_108432688_108434125_108434286_108436181
tx.24119	chr4	-	2405	9	ISM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	1007	0	1007	0	3prime_fragment	FALSE	canonical	3	462	junction_7	46.1674939757401	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	108435526	108422066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125
tx.2412	chr11	+	744	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	425	1	0	1	multi-exon	FALSE	canonical	3	36680	junction_4	732.852474922477	2321	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTTGTTTGTATTGGA	NA	False	NA	NA	False	NA	NA	NA	6365867	6369816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
tx.24120	chr4	-	4904	20	NNC	ENSMUSG00000034557.15	novel	6459	19	NA	NA	-72	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.05027454721699	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTACACTCTTGATT	562	False	NA	NA	False	NA	NA	NA	108638067	108494664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_108494784_108496408_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
tx.24121	chr4	-	4622	11	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-104	42556	-104	-40763	5prime_fragment	FALSE	canonical	3	12	junction_2	4.53431361950185	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATATGTTCTCAACAA	530	False	NA	NA	False	NA	NA	NA	108638099	108537218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
tx.24122	chr4	+	4960	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-6	-140	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	39.1648158138343	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTTGTGCTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	109137458	109244874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
tx.24123	chr4	-	3859	7	NIC	ENSMUSG00000028546.18	novel	4149	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.852097798374	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	110209123	110060933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_110063899_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
tx.24124	chr4	+	7469	2	ISM	ENSMUSG00000034210.15	ENSMUST00000132306.2	2368	4	-59	7192	-23	-7192	intron_retention	FALSE	canonical	3	178	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115594917	115603937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_115596038_115597588
tx.24125	chr4	+	3086	21	ISM	ENSMUSG00000028700.15	ENSMUST00000121052.8	2693	22	12825	18	55	-18	3prime_fragment	FALSE	canonical	3	321	junction_8	36.8109698323747	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	NA	False	NA	NA	NA	116007776	116017023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
tx.24126	chr4	+	4477	9	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	63	2583	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.978055643177	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAAATGTCAGTATG	NA	False	NA	NA	False	NA	NA	NA	116364811	116398023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_116364848_116367718_116367895_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
tx.24127	chr4	-	2398	3	FSM	ENSMUSG00000055900.15	ENSMUST00000069674.6	974	3	-3	-1421	-2	99	multi-exon	TRUE	canonical	3	51	junction_2	6.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTCTGGATTGTCTAAG	NA	False	NA	NA	False	NA	NA	NA	116413135	116408730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_116410927_116411964_116412101_116413069
tx.24128	chr4	+	1818	18	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	65.0266913523616	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGAGAACTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	116664942	116676629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_116664969_116667792_116667886_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
tx.24129	chr4	-	3833	7	ISM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	-70	-955	-30	-1	intron_retention	FALSE	canonical	3	21	junction_6	3.63623737154524	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTAATGTCAGCATTCA	9677	False	NA	NA	False	NA	NA	NA	116982885	116976416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135
tx.2413	chr11	-	1520	4	ISM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	4989	7	4898	-7	3prime_fragment	FALSE	canonical	3	3219	junction_3	43.6882898116494	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAAGCCATGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	6389454	6377235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375
tx.24130	chr4	-	3974	6	ISM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	-55	-955	-15	-1	intron_retention	FALSE	canonical	3	25	junction_2	2.28035085019828	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTAATGTCAGCATTCA	9692	False	NA	NA	False	NA	NA	NA	116982870	116976416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925
tx.24131	chr4	+	952	3	FSM	ENSMUSG00000048772.16	ENSMUST00000062824.12	991	3	39	0	39	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTATCTATCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	117109186	117125777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_117109332_117123056_117123173_117125086
tx.24132	chr4	-	7216	14	Fusion	ENSMUSG00000028541.15_ENSMUSG00000091237.2	novel	4093	13	NA	NA	-13	2736	intron_retention	FALSE	canonical	1	2	junction_3	33.2134926599802	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGCCCGGCCTGAAT	NA	False	NA	NA	False	NA	NA	NA	117740697	117723720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr4_-_117727026_117727106_117727186_117727302_117727373_117727712_117727768_117728260_117728387_117728943_117729058_117729185_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
tx.24133	chr4	-	2496	11	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	25.6142538442954	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTTTTCTCTGACT	1880	False	NA	NA	False	NA	NA	NA	117992093	117789347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991600
tx.24134	chr4	-	2616	12	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	26.3545438866066	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTCCTGTTGTTTTC	1851	False	NA	NA	False	NA	NA	NA	117992122	117789354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
tx.24135	chr4	-	2619	13	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	26.6691405102518	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1880	False	NA	NA	False	NA	NA	NA	117992093	117789356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991600
tx.24136	chr4	-	7650	34	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	29	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	110.857091635313	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTCTGTCTCAGCT	NA	False	NA	NA	False	NA	NA	NA	118148573	118065413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118085015_118085043_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
tx.24137	chr4	+	999	7	NIC	ENSMUSG00000006395.17	novel	936	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	22	junction_3	5.56776436283002	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGTATATTACAG	NA	False	NA	NA	False	NA	NA	NA	118217197	118219941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
tx.24138	chr4	+	926	8	FSM	ENSMUSG00000006395.17	ENSMUST00000194248.2	936	8	11	-1	2	1	multi-exon	FALSE	canonical	3	16	junction_1	6.43333157097011	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGTGTATATTACAGG	NA	False	NA	NA	False	NA	NA	NA	118217197	118219942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_118217429_118217502_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
tx.24139	chr4	-	1792	2	FSM	ENSMUSG00000050854.10	ENSMUST00000150044.2	717	2	-5	-1070	-5	-6	multi-exon	FALSE	canonical	3	10	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCTGTCTGCACC	9086	False	NA	NA	False	NA	NA	NA	118400164	118398143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_118399569_118399797
tx.2414	chr11	-	586	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	-64	-3	27	3	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCAGTATTTCTTC	NA	False	NA	NA	False	NA	NA	NA	6394416	6378134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
tx.24140	chr4	-	7070	5	FSM	ENSMUSG00000078584.10	ENSMUST00000144309.2	441	5	-4	-6625	-4	-5	multi-exon	FALSE	canonical	3	17	junction_4	161.922049147113	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGTTTTGCTTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	119089886	119077043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089832
tx.24141	chr4	-	6979	4	NIC	ENSMUSG00000078584.10	novel	441	5	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	9	junction_3	174.450247603404	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAAGTTTTGCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	119089913	119077045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089832
tx.24142	chr4	-	1639	3	NNC	ENSMUSG00000028636.15	novel	1443	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	132	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGTTTCTGGTTTTTT	5521	False	NA	NA	False	NA	NA	NA	119279601	119275726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_119276491_119278564_119278881_119279042
tx.24143	chr4	+	4462	2	NIC	ENSMUSG00000032998.17	novel	4660	12	NA	NA	2032	0	intron_retention	FALSE	canonical	3	123	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	119480570	119486316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_119482202_119483485
tx.24144	chr4	+	3688	18	NIC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-85	-1	intron_retention	FALSE	canonical	0	0	junction_4	22.223308316404	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGTGTCTTTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	120262392	120387380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120313481_120313707_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
tx.24145	chr4	-	4128	14	FSM	ENSMUSG00000028631.8	ENSMUST00000030376.8	3919	14	-205	-4	-205	4	multi-exon	TRUE	canonical	0	0	junction_9	1.49159380228195	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTTGGTTGTGCTCGG	9226	False	NA	NA	False	NA	NA	NA	120604650	120553330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_120555304_120555695_120555826_120557088_120557221_120559582_120559683_120561551_120561773_120568419_120568582_120570208_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748_120573925_120574121_120574249_120574654_120574746_120604056
tx.24146	chr4	-	6330	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.2361099523518	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTTACTCATAGAGTC	6464	False	NA	NA	False	NA	NA	NA	121072281	121003080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121028594_121028684_121039802_121039936_121045411_121045494_121047300_121047456_121072031
tx.24147	chr4	+	2985	7	FSM	ENSMUSG00000002384.3	ENSMUST00000002457.2	2940	7	-44	-1	-44	1	multi-exon	FALSE	canonical	2	3	junction_1	4.18993502999218	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGGTCATGGTGTTC	72	False	NA	NA	False	NA	NA	NA	122998913	123019885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_122999469_123008360_123008551_123008938_123009088_123015678_123015874_123016308_123016389_123016739_123016851_123018180
tx.24148	chr4	+	9243	16	FSM	ENSMUSG00000001985.10	ENSMUST00000030676.8	8973	16	-272	2	-272	-2	multi-exon	FALSE	canonical	2	6	junction_13	6.12100209660695	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTTCCCAAGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	125384220	125607964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689
tx.24149	chr4	-	7144	19	FSM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	1	8450	1	4395	multi-exon	FALSE	canonical	2	3	junction_6	10.4927958825138	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTTGAGTGAGGTCTT	2365	False	NA	NA	False	NA	NA	NA	126323348	126234974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
tx.2415	chr11	-	696	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	29	908	29	1	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	703	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTCAGTATTTCT	NA	False	NA	NA	False	NA	NA	NA	6394414	6378136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
tx.24150	chr4	-	6668	18	FSM	ENSMUSG00000042500.12	ENSMUST00000084289.5	6537	18	-135	4	-135	-4	multi-exon	TRUE	canonical	0	0	junction_1	2.71991247569339	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTTTTTCTCATCA	2107	False	NA	NA	False	NA	NA	NA	126427400	126383337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_126387125_126390541_126390742_126391003_126391106_126400536_126400672_126400803_126401120_126402140_126402301_126403743_126403929_126405192_126405327_126405518_126405648_126405791_126405912_126406312_126406461_126409679_126409768_126410629_126410765_126410862_126411000_126411168_126411351_126413983_126414105_126419790_126419957_126426977
tx.24151	chr4	+	5046	26	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_25	24.64	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	NA	False	NA	NA	NA	126450750	126487696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486832
tx.24152	chr4	-	9799	30	Fusion	ENSMUSG00000042446.17_ENSMUSG00000088984.3	novel	7102	30	NA	NA	-91	1585	multi-exon	FALSE	canonical	0	0	junction_9	61.1143253337449	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAAAACTGTACCCAT	NA	False	NA	NA	False	NA	NA	NA	126862019	126753187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126784034_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
tx.24153	chr4	-	7303	31	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	74.3	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	126862019	126755731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126811545_126811659_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
tx.24154	chr4	-	6923	28	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_19	60.0295080617394	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	126862019	126755731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
tx.24155	chr4	-	6286	5	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-97	56057	-97	-3048	5prime_fragment	FALSE	canonical	3	222	junction_1	26.3818119165458	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTTCATTTATTTACA	NA	False	NA	NA	False	NA	NA	NA	126862025	126811788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
tx.24156	chr4	+	449	4	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	31.7104959840674	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTGTGTTTGTGTGT	9242	False	NA	NA	False	NA	NA	NA	127224003	127232837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_127224096_127225680_127225785_127226134_127226258_127232707
tx.24159	chr4	-	2976	8	NIC	ENSMUSG00000028799.16	novel	2812	9	NA	NA	-294	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	5.03457433905889	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTGTCGGCTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	128700132	128666884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128699804
tx.2416	chr11	-	606	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	5	0	5	0	multi-exon	FALSE	canonical	3	436	junction_3	5.24933858267454	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	6478774	6475590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
tx.24160	chr4	-	2474	9	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	-1	781	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	8.93028554974588	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGTTATTATTTATT	NA	False	NA	NA	False	NA	NA	NA	128856233	128825033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855876_128855998_128856093
tx.24161	chr4	-	981	2	FSM	ENSMUSG00000085085.3	ENSMUST00000149472.3	1009	2	46	-18	46	18	multi-exon	FALSE	canonical	3	8	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTGGCTCTTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	128951730	128943871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_128944703_128951580
tx.24162	chr4	-	1155	3	NNC	ENSMUSG00000085085.3	novel	1009	2	NA	NA	7	16	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTCTTGGCTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	128951769	128943873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_128944703_128944860_128944998_128951580
tx.24163	chr4	+	5660	6	NIC	ENSMUSG00000057572.16	novel	3833	7	NA	NA	-81	-4	intron_retention	FALSE	canonical	3	561	junction_3	62.6597159265824	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGTGTGTAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	129229406	129240822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
tx.24164	chr4	-	1346	3	ISM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	17915	5	17915	-5	3prime_fragment	FALSE	canonical	3	150	junction_2	0.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATCTTTTTCGTGACAC	9484	False	NA	NA	False	NA	NA	NA	129253994	129247425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_129248298_129251497_129251668_129253690
tx.24165	chr4	-	2780	4	FSM	ENSMUSG00000048485.13	ENSMUST00000053042.6	3288	4	3	505	3	-1	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTGCTTGTATTTT	742	False	NA	NA	False	NA	NA	NA	129334608	129320062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129321621_129322220_129322400_129326103_129327105_129334566
tx.24166	chr4	-	2111	13	FSM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	-42	5	-23	0	multi-exon	TRUE	canonical	3	4	junction_12	60.4484973620795	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACTGCATACTT	NA	False	NA	NA	False	NA	NA	NA	129452207	129442141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873_129451984_129452080
tx.24167	chr4	+	4976	28	NIC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-101	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	7.49485420179558	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTGCCCGGATTGTT	NA	False	NA	NA	False	NA	NA	NA	129878855	129916425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_129879101_129885846_129886673_129898817_129898902_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
tx.24168	chr4	-	1863	10	FSM	ENSMUSG00000023232.18	ENSMUST00000105996.8	1878	10	13	2	13	-2	multi-exon	FALSE	canonical	2	4	junction_9	3.01027048536535	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTCCCATGTCTTG	7809	False	NA	NA	False	NA	NA	NA	130169366	130147289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130169250
tx.24169	chr4	+	5240	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	126.002609482391	45	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	NA	False	NA	NA	NA	130390676	130508875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
tx.2417	chr11	-	2622	2	FSM	ENSMUSG00000064513.3_ENSMUSG00000085156.9	ENSMUST00000129570.3	1631	2	-990	-1	14	0	multi-exon	FALSE	canonical	3	446	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	6478749	6475590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_6475818_6476354
tx.24170	chr4	+	5333	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	-18	-1298	1	0	multi-exon	TRUE	canonical	3	368	junction_8	95.9617506945964	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	NA	False	NA	NA	NA	130390678	130508875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
tx.24171	chr4	+	5044	20	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	146.707861670397	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	NA	False	NA	NA	NA	130390679	130508875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
tx.24172	chr4	+	5336	22	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_8	114.255134797804	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	NA	False	NA	NA	NA	130390678	130508875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
tx.24173	chr4	-	180	2	Antisense	novelGene_ENSMUSG00000028580.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	1	1	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTAGTTTGTAAA	NA	False	NA	NA	False	NA	NA	NA	130410800	130394081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_-_130394093_130410631
tx.24174	chr4	-	5203	18	NIC	ENSMUSG00000028906.18	novel	5141	18	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	36.0801683298845	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	NA	NA	NA	131776438	131650723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695284_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
tx.24175	chr4	-	4635	10	NNC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	16.1528195757556	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATAAGTACTAAACGC	1912	False	NA	NA	False	NA	NA	NA	131988913	131950268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979141_131988801
tx.24176	chr4	-	4046	9	NIC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	2	62	intron_retention	FALSE	canonical	3	10	junction_8	19.3245310421754	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTGGCTGTCATGGAG	1914	False	NA	NA	False	NA	NA	NA	131988911	131952267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
tx.24177	chr4	+	376	4	FSM	ENSMUSG00000086290.10	ENSMUST00000232301.2	1538	4	1162	0	20	0	multi-exon	FALSE	canonical	3	202	junction_2	0.471404520791032	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	132037148	132038335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_132037215_132037461_132037527_132037761_132037816_132038144
tx.24178	chr4	-	1620	4	NNC	ENSMUSG00000066042.5	novel	1675	3	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.055542912051	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGATTCTGATTCTTA	1056	False	NA	NA	False	NA	NA	NA	132191223	132186039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_132186348_132186395_132187425_132190175_132190320_132191084
tx.24179	chr4	+	2668	18	NIC	ENSMUSG00000028886.16	novel	5160	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	22.5258021989425	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	NA	False	NA	NA	NA	132366356	132449446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132408066_132408205_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
tx.2418	chr11	+	1860	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	-2	0	-2	0	multi-exon	TRUE	canonical	3	315	junction_9	41.5204843093617	377	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	6496884	6546744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
tx.24180	chr4	-	3086	6	FSM	ENSMUSG00000037731.6	ENSMUST00000045154.6	3079	6	-14	7	-14	-7	multi-exon	FALSE	canonical	0	0	junction_1	1.16619037896906	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGAGTGAAATGTCTTG	9898	False	NA	NA	False	NA	NA	NA	132523712	132509160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_132510317_132510658_132510810_132512493_132513582_132516855_132517264_132519788_132519930_132523570
tx.24181	chr4	-	3182	10	NNC	ENSMUSG00000028878.12	novel	3053	9	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	48.4722142629729	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGTTGTGATTCAGT	NA	False	NA	NA	False	NA	NA	NA	132649871	132626525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_132628620_132629313_132629416_132631208_132631345_132636936_132637066_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
tx.24182	chr4	+	6039	7	NIC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	-15	6	intron_retention	FALSE	canonical	1	4	junction_1	38.0850656061168	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAACCTTGTGTC	1174	False	NA	NA	False	NA	NA	NA	132738801	132804962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_132738835_132739500_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
tx.24183	chr4	+	171	2	Antisense	novelGene_ENSMUSG00000037622.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTTTTTTTTTTTTTT	253	False	NA	NA	False	NA	NA	NA	133039804	133040176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_133039952_133040152
tx.24184	chr4	+	5285	10	ISM	ENSMUSG00000028854.10	ENSMUST00000030669.8	4676	12	43323	0	-3277	0	3prime_fragment	FALSE	canonical	3	38	junction_1	12.0901960077648	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGGGCTGCTTCCTGGG	7476	False	NA	NA	False	NA	NA	NA	133140339	133151013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
tx.24185	chr4	+	4002	7	NIC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	1481	-6	intron_retention	FALSE	canonical	3	45	junction_1	12.5432584814845	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTCCAGGGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	133145097	133151007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
tx.24186	chr4	-	3980	2	ISM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	6889	-474	6889	474	3prime_fragment	FALSE	canonical	3	62	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGAAGTGGATGTCTTT	NA	False	NA	NA	False	NA	NA	NA	133393069	133387223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_133390103_133391968
tx.24187	chr4	-	4300	5	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	67072	4	34237	-4	3prime_fragment	FALSE	canonical	3	132	junction_4	19.1490861400747	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACTTTGTGAAGCTTT	3318	False	NA	NA	False	NA	NA	NA	133413850	133406322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714
tx.24188	chr4	+	193	2	Antisense	novelGene_ENSMUSG00000003644.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCTCAGAACTAACACA	9900	False	NA	NA	False	NA	NA	NA	133563281	133590489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_133563390_133590404
tx.24189	chr4	+	6068	22	FSM	ENSMUSG00000012123.18	ENSMUST00000227683.2	5578	22	-492	2	-492	1	multi-exon	FALSE	canonical	1	2	junction_1	46.1690672034849	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	NA	False	NA	NA	NA	133787633	133819813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_133788242_133790613_133790684_133792549_133793266_133799740_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
tx.2419	chr11	-	2330	13	FSM	ENSMUSG00000000384.16	ENSMUST00000156969.8	2324	13	-7	1	-7	0	multi-exon	FALSE	canonical	3	74	junction_1	134.990406037697	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	6576050	6565598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
tx.24190	chr4	+	4131	19	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	4521	2	4521	1	3prime_fragment	FALSE	canonical	3	14	junction_1	44.6930891998105	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	NA	False	NA	NA	NA	133800283	133819813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
tx.24191	chr4	+	2481	14	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	10	4	intron_retention	TRUE	canonical	3	35	junction_2	25.7307404852087	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCACAAGGCTCTCCAGA	NA	False	NA	NA	False	NA	NA	NA	133829903	133854091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
tx.24192	chr4	+	2722	13	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	10	7	intron_retention	FALSE	canonical	3	35	junction_2	26.1709126066835	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGGCTCTCCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	133829903	133854094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
tx.24193	chr4	+	1970	5	NIC	ENSMUSG00000012126.17	novel	2014	11	NA	NA	33	7	intron_retention	FALSE	canonical	3	96	junction_2	7.34846922834953	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGGCTCTCCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	133850812	133854094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
tx.24194	chr4	-	2074	2	FSM	ENSMUSG00000028840.11	ENSMUST00000129183.2	2020	2	-54	0	-4	0	multi-exon	FALSE	canonical	3	614	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAGTGTGCATGTAT	7664	False	NA	NA	False	NA	NA	NA	133972907	133970617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133972399_133972614
tx.24195	chr4	-	2988	12	NNC	ENSMUSG00000028838.12	novel	4126	11	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	14.4032824541681	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCGGGCTATAAATACGC	6991	False	NA	NA	False	NA	NA	NA	134099901	134083683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268_134098623_134099791
tx.24196	chr4	+	2756	4	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	17	4051	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	203.032017179557	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134238326	134255289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_134238481_134248782_134248913_134250264_134251057_134253609
tx.24197	chr4	+	1433	8	ISM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	15037	1	-237	-1	3prime_fragment	FALSE	canonical	3	9	junction_1	5.80288457473997	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAAGGTCTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	134606883	134623482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
tx.24198	chr4	-	3681	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	3	155	junction_8	305.61565296241	51	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	NA	False	NA	NA	NA	135080482	135047799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059116_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.24199	chr4	-	3655	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_5	299.84422387925	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	NA	False	NA	NA	NA	135080498	135047799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.242	chr1	+	3334	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.7317151150175	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTTTAATGTCTATGT	NA	False	NA	NA	False	NA	NA	NA	44158116	44183681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_44158336_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
tx.2420	chr11	-	2398	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	7	13	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	147.44311131545	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTCTGTATCTATCTC	NA	False	NA	NA	False	NA	NA	NA	6576060	6566409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
tx.24200	chr4	-	3753	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_5	295.204790801421	49	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	NA	False	NA	NA	NA	135080554	135047799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.24201	chr4	-	1834	5	NIC	ENSMUSG00000043924.17	novel	2000	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	5.8309518948453	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTTGTCACCTTGCA	5693	False	NA	NA	False	NA	NA	NA	135125537	135096886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_135098022_135099187_135099273_135104301_135104385_135107962_135108150_135125193
tx.24202	chr4	-	4990	12	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	3223	-2	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	21.7734389710973	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCGGGTCCTGTGTTGC	7528	False	NA	NA	False	NA	NA	NA	135218594	135176204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243
tx.24203	chr4	+	2795	2	FSM	ENSMUSG00000086788.3	ENSMUST00000134416.2	1002	2	-75	-1718	44	5	multi-exon	FALSE	canonical	2	7	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAATCATTAAGAAAGGG	NA	False	NA	NA	False	NA	NA	NA	135354009	135357514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_135354357_135355066
tx.24204	chr4	-	1668	9	FSM	ENSMUSG00000028670.15	ENSMUST00000145350.2	1119	9	-15	-534	0	-6	multi-exon	FALSE	canonical	3	407	junction_1	24.7474746186353	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGGGCTCCCTTATGT	NA	False	NA	NA	False	NA	NA	NA	135699914	135695540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_135696379_135696454_135696629_135696738_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
tx.24205	chr4	-	4858	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105846.9	3653	16	-167	-1038	-22	0	multi-exon	FALSE	canonical	1	1	junction_8	7.94816540676736	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCTGTACTCTGTAAG	NA	False	NA	NA	False	NA	NA	NA	136563321	136380918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399822_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
tx.24206	chr4	+	5363	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10293	3	intron_retention	FALSE	canonical	3	584	junction_8	235.922685640868	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCGGAGTGAGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	137331831	137385845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
tx.24207	chr4	+	3175	23	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_19	41.6859569671186	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	9890	False	NA	NA	False	NA	NA	NA	137434772	137457172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137455040_137455091_137455570_137455675_137455838_137455880_137456185
tx.24208	chr4	+	6382	33	NIC	ENSMUSG00000028760.17	novel	6139	35	NA	NA	115	-22	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	5.99601104381071	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAAAGACTTCTCCTT	742	False	NA	NA	False	NA	NA	NA	137720447	137934368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
tx.24209	chr4	-	2884	2	FSM	ENSMUSG00000043621.14	ENSMUST00000105811.9	2926	2	44	-2	0	2	multi-exon	FALSE	canonical	2	4	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGTGTGAAGGCGTC	7393	False	NA	NA	False	NA	NA	NA	138452532	138445846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_138448690_138452491
tx.2421	chr11	-	2312	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	-17	-5	7	5	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	547	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTTCCCAGGCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	6576060	6566417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
tx.24210	chr4	-	1524	2	ISM	ENSMUSG00000028747.11	ENSMUST00000105802.8	2341	4	-30	12866	-30	-12565	5prime_fragment	FALSE	canonical	2	4	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGACTGCCTCATAGT	6927	False	NA	NA	False	NA	NA	NA	138802911	138801284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_138802641_138802743
tx.24211	chr4	-	902	4	ISM	ENSMUSG00000040935.13	ENSMUST00000038749.11	2333	16	11517	1	1917	-1	intron_retention	FALSE	canonical	3	19	junction_1	1.24721912892465	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTTTACGCCGCCTGA	NA	False	NA	NA	False	NA	NA	NA	140458437	140454666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_140455121_140456177_140456340_140457019_140457091_140458222
tx.24212	chr4	-	1038	5	NNC	ENSMUSG00000040842.18	novel	3244	4	NA	NA	-2	1254	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	87.0470418796641	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140867079	140842623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_140843176_140843847_140843952_140845837_140846093_140847634_140847685_140867002
tx.24213	chr4	+	3273	2	ISM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	34	33310	25	-24460	5prime_fragment	FALSE	canonical	3	204	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACATTTGTAATGATTTT	NA	False	NA	NA	False	NA	NA	NA	140875257	140898063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_140875491_140895023
tx.24214	chr4	-	888	6	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7993	4	-2664	-4	3prime_fragment	FALSE	canonical	3	74	junction_3	20.1454709550311	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4471	False	NA	NA	False	NA	NA	NA	141135332	141131667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114
tx.24215	chr4	+	2694	3	FSM	ENSMUSG00000006221.8	ENSMUST00000102486.5	2769	3	78	-3	78	3	multi-exon	FALSE	canonical	3	12	junction_2	1	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGGAGACCCCACCTG	226	False	NA	NA	False	NA	NA	NA	141148167	141152625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_141149292_141149811_141149946_141151189
tx.24216	chr4	-	4487	4	ISM	ENSMUSG00000040761.17	ENSMUST00000078886.10	12082	15	65359	-4	-1597	4	intron_retention	FALSE	canonical	3	66	junction_3	11.323525167642	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGAAGGTGGTTGTCA	9963	False	NA	NA	False	NA	NA	NA	141200401	141195196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420
tx.24217	chr4	-	3224	2	ISM	ENSMUSG00000043085.15	ENSMUST00000156246.2	2478	5	287	-4	287	0	intron_retention	FALSE	canonical	3	77	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	NA	False	NA	NA	NA	141345005	141341543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_141342018_141342255
tx.24218	chr4	-	6281	8	ISM	ENSMUSG00000078515.5	ENSMUST00000102484.5	9553	10	14993	2749	14993	-2749	3prime_fragment	FALSE	canonical	3	149	junction_7	29.8848128790583	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTGTAATTTCCCTC	9697	False	NA	NA	False	NA	NA	NA	141435737	141407608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530
tx.24219	chr4	-	6270	8	NIC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-13	2970	combination_of_known_splicesites	TRUE	canonical	1	8	junction_1	64.2599948550847	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATTTTGTTTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	141450743	141407903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_141412943_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
tx.2422	chr11	+	7436	20	FSM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	-79	4902	-79	725	multi-exon	FALSE	canonical	3	12	junction_6	3.58667895524228	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTATCCTTGAATCGTGA	NA	False	NA	NA	False	NA	NA	NA	7013409	7123604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
tx.24220	chr4	+	2104	3	NIC	ENSMUSG00000073728.11	novel	675	4	NA	NA	129	-7	intron_retention	FALSE	canonical	3	10	junction_1	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCAAAAACTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141811411	141815356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_141813043_141813690_141813870_141815062
tx.24221	chr4	-	1909	2	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	143715150	143710577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_143712141_143714804
tx.24222	chr4	+	2644	4	FSM	ENSMUSG00000070619.6	ENSMUST00000094526.5	2094	4	-16	-534	-16	534	multi-exon	TRUE	canonical	1	3	junction_3	3.09120616516523	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAAATGGAGACTTG	NA	False	NA	NA	False	NA	NA	NA	144084495	144091523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_144084551_144088178_144088493_144088970_144089562_144089839
tx.24223	chr4	-	7464	13	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	9370	4140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.81028989655394	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATATTTATAATTCTTA	NA	False	NA	NA	False	NA	NA	NA	145032347	144989566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145032311
tx.24224	chr4	+	2458	2	Genic_Genomic	ENSMUSG00000070583.2	novel	1380	1	NA	NA	-138	1916	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACACACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147953297	147956731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr4_+_147953925_147954900
tx.24225	chr4	-	5004	22	NIC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	32.5614019655049	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTTGTCTCCACGGTG	7396	False	NA	NA	False	NA	NA	NA	148123296	148088717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
tx.24226	chr4	+	3589	5	FSM	ENSMUSG00000028974.14	ENSMUST00000103216.10	1835	5	25	-1779	25	2	multi-exon	FALSE	canonical	3	30	junction_2	2.34520787991171	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTTTGTTTGTCAG	NA	False	NA	NA	False	NA	NA	NA	149188627	149205106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228
tx.24228	chr4	-	2189	3	Antisense	novelGene_ENSMUSG00000086665.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	150133570	150128021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_-_150129480_150131923_150132565_150133480
tx.24229	chr4	+	7702	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-79	1	combination_of_known_junctions	TRUE	canonical	3	13	junction_20	32.5570143544132	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	150366023	150706420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703457_150703663_150703912
tx.2423	chr11	-	7486	30	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	19610	0	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_29	13.2277228427735	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	3702	False	NA	NA	False	NA	NA	NA	8555277	8381651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8555105
tx.24230	chr4	+	7703	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-101	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	30.0910937471953	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	150366001	150706420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
tx.24231	chr4	+	3686	5	ISM	ENSMUSG00000039852.18	ENSMUST00000105680.9	6503	17	127642	-1	620	1	3prime_fragment	FALSE	canonical	3	105	junction_1	22.588713996153	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	-54	True	NA	NA	NA	150700491	150706420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
tx.24232	chr4	-	5222	13	NIC	ENSMUSG00000014592.22	novel	4962	14	NA	NA	51	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.16624148553054	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTGTTTTGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	151192982	151143979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151161033_151161055_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
tx.24233	chr4	-	5544	12	NIC	ENSMUSG00000014592.22	novel	4961	12	NA	NA	47	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	5.03541179059136	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTGTTTTGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	151192986	151143979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
tx.24234	chr4	-	1095	5	NNC	ENSMUSG00000014592.22	novel	2198	4	NA	NA	0	369	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	499.788705354573	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATACAGTTATCTCATTA	NA	False	NA	NA	False	NA	NA	NA	151946203	151876317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_151876960_151914874_151914994_151915132_151915275_151920270_151920341_151946081
tx.24235	chr4	-	4271	2	ISM	ENSMUSG00000014592.22	ENSMUST00000135780.2	506	3	-8	34158	0	-34158	5prime_fragment	FALSE	canonical	3	63	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	151946203	151910844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_151914994_151946081
tx.24236	chr4	+	3826	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	45.4175076374739	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTCATGGCCTTC	6507	False	NA	NA	False	NA	NA	NA	152093368	152102137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101314_152101364
tx.24237	chr4	-	2191	11	NNC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	3	0	intron_retention	FALSE	canonical	1	1	junction_10	16.4745257898369	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTCTGTTCCTTGG	8682	False	NA	NA	False	NA	NA	NA	152112115	152104230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152112023
tx.24238	chr4	-	2280	10	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	4	-1	intron_retention	FALSE	canonical	3	24	junction_9	11.8049999869275	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCAGTGTCTGTTCCT	8683	False	NA	NA	False	NA	NA	NA	152112114	152104233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
tx.24239	chr4	+	4278	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	104	junction_1	14.6574213284602	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	NA	False	NA	NA	NA	152171307	152199844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
tx.2424	chr11	-	7573	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239111.2	7629	31	50	6	50	-6	multi-exon	FALSE	canonical	3	26	junction_30	11.9341247409826	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATGAAGCATTTTTTT	10007	False	NA	NA	False	NA	NA	NA	8614631	8381657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
tx.24240	chr4	-	2825	12	NIC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-32	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	3.7482778414706	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGAGATTCTGCATT	NA	False	NA	NA	False	NA	NA	NA	152236860	152212248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_152212790_152212864_152213011_152215225_152215419_152215508_152215752_152217380_152217414_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
tx.24241	chr4	+	7734	33	ISM	ENSMUSG00000005045.17	ENSMUST00000030775.12	9486	42	24282	14	-9209	-1	3prime_fragment	TRUE	canonical	2	3	junction_4	3.08980177357707	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAATCGCTGTAGTTCT	NA	False	NA	NA	False	NA	NA	NA	152447389	152474637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462248_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470180_152470296_152470405_152470460_152471371
tx.24242	chr4	-	3596	16	FSM	ENSMUSG00000028931.13	ENSMUST00000160884.9	3961	16	364	1	-2	0	multi-exon	TRUE	canonical	1	3	junction_13	3.63684845252956	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTCTGATCTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	152562003	152475201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152519238_152519281_152520261_152520395_152561857
tx.24243	chr4	+	2654	12	ISM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-2	18231	-2	425	5prime_fragment	FALSE	canonical	3	75	junction_10	10.7963875194935	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATATAAGTACCAGGTA	NA	False	NA	NA	False	NA	NA	NA	154059648	154074958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231
tx.24244	chr4	-	4581	11	ISM	ENSMUSG00000029026.18	ENSMUST00000133533.8	4752	12	15492	1	3641	-1	3prime_fragment	FALSE	canonical	3	9	junction_10	4.31277173056957	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTGACTATTGTAACTA	NA	False	NA	NA	False	NA	NA	NA	154166138	154140710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785
tx.24245	chr4	+	3273	11	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	16	-1452	16	1452	intron_retention	FALSE	canonical	3	51	junction_4	7.11407056473296	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTCTAATCGGATAC	NA	False	NA	NA	False	NA	NA	NA	154226844	154242725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557
tx.24246	chr4	-	3449	6	NNC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	5231	-2356	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	7.55248303539968	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCAAGGTGTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	154414078	154402937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154413825
tx.24247	chr4	-	3172	6	NIC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	-4	-2360	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.38093073590279	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGAGCAAGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	154419383	154402941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
tx.24248	chr4	-	3372	7	NIC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	-25	-2356	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	6.36177822799744	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCAAGGTGTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	154419404	154402937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
tx.24249	chr4	-	1768	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	33	1	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_7	625.276037002042	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGTCTACACGAGTCA	NA	False	NA	NA	False	NA	NA	NA	155170795	155158565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167772_155170661
tx.2425	chr11	-	7776	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	118	3	118	-3	multi-exon	FALSE	canonical	3	18	junction_30	12.8998277335612	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCATTTTTTTAAG	5193	False	NA	NA	False	NA	NA	NA	8574769	8381654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
tx.24250	chr4	-	5776	6	NIC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-485	-108	intron_retention	FALSE	canonical	3	19	junction_5	92.6809581305675	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGCATATTTATCTATT	NA	False	NA	NA	False	NA	NA	NA	155307534	155238639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155306008
tx.24251	chr4	-	3744	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-6	0	intron_retention	FALSE	canonical	3	119	junction_13	62.6646971262766	87	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7414	False	NA	NA	False	NA	NA	NA	155753661	155739138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
tx.24252	chr4	-	3649	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_20	81.1806011310584	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7425	False	NA	NA	False	NA	NA	NA	155753650	155739138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
tx.24253	chr4	-	3542	2	Genic_Genomic	ENSMUSG00000096221.4	novel	2183	1	NA	NA	-21	1984	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAAAAATTCAATGAAT	NA	False	NA	NA	False	NA	NA	NA	155819105	155815017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr4_-_155818296_155818841
tx.24254	chr4	+	1280	7	NNC	ENSMUSG00000023286.17	novel	1309	7	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	406.426602639804	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATACTCTGTGTGTGTT	764	False	NA	NA	False	NA	NA	NA	156028294	156042166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039898_156040018_156040824_156040906_156041537
tx.24255	chr4	+	2776	10	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-6	1	intron_retention	FALSE	canonical	1	9	junction_3	76.5216018883266	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8249	False	NA	NA	False	NA	NA	NA	156194432	156211721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
tx.24256	chr4	+	5652	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	85	junction_1	51.0613876243336	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8292	False	NA	NA	False	NA	NA	NA	156194475	156211718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.24257	chr5	-	3617	4	ISM	ENSMUSG00000046798.15	ENSMUST00000179804.8	3752	5	429	94	89	0	3prime_fragment	FALSE	canonical	2	3	junction_3	30.169889330626	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	5564360	5555108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564231
tx.24258	chr5	-	3524	6	FSM	ENSMUSG00000015653.14	ENSMUST00000115426.9	10408	6	-14	6898	-14	-2	multi-exon	FALSE	canonical	3	8	junction_5	11.3384302264467	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCTTTCCCACCATTGT	4759	False	NA	NA	False	NA	NA	NA	5744592	5721726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
tx.24259	chr5	+	3296	3	FSM	ENSMUSG00000003161.16	ENSMUST00000144265.6	531	3	-15	-2750	-11	0	multi-exon	FALSE	canonical	3	504	junction_2	21	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8106546	8112471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_8106640_8107537_8107622_8109352
tx.2426	chr11	-	7742	32	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	108	-2	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	15.4454496429277	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGCATTTTTTTAAGT	5183	False	NA	NA	False	NA	NA	NA	8574779	8381653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
tx.24260	chr5	-	2430	12	FSM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	-58	29	-22	9	multi-exon	FALSE	canonical	3	32	junction_5	130.994164276048	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATGAATATCATTTG	NA	False	NA	NA	False	NA	NA	NA	8472738	8447001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454914_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
tx.24261	chr5	-	3947	11	NIC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-27	-7	intron_retention	FALSE	canonical	3	396	junction_2	49.471304814003	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATTCCTGAGAATAA	NA	False	NA	NA	False	NA	NA	NA	8472743	8447017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
tx.24263	chr5	+	3408	5	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-39	52776	0	-112	intron_retention	FALSE	canonical	3	110	junction_4	17.1955662890176	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTATTTGTAACACAATT	NA	False	NA	NA	False	NA	NA	NA	8848146	8863539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557
tx.24264	chr5	-	2245	6	ISM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	144	20231	-138	-83	5prime_fragment	FALSE	canonical	3	180	junction_2	23.4179418395383	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATCTGAATGAATTTGT	NA	False	NA	NA	False	NA	NA	NA	9047180	9036263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
tx.24265	chr5	+	3926	8	NNC	ENSMUSG00000040003.19	novel	899	6	NA	NA	-33901	2	intron_retention	FALSE	canonical	1	1	junction_1	2.38190457150472	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCCAGCTATAT	NA	False	NA	NA	False	NA	NA	NA	20773593	20909773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_20773725_20774103_20774353_20805775_20805962_20807344_20807520_20814261_20814458_20816042_20816187_20856052_20856192_20907067
tx.24266	chr5	-	4640	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	15	-107	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	66.6397119672096	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	21087107	20963767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008315_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
tx.24267	chr5	-	4562	8	NIC	ENSMUSG00000039987.16	novel	2044	9	NA	NA	22	2659	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	83.2250452884545	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCACTTTATTTCAAT	NA	False	NA	NA	False	NA	NA	NA	21087100	20991085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
tx.24268	chr5	-	3634	9	FSM	ENSMUSG00000039987.16	ENSMUST00000139325.8	2044	9	-44	-1546	3	1546	multi-exon	FALSE	canonical	3	161	junction_1	42.4352447854375	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATATGATGGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	21087119	20992198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
tx.24269	chr5	-	1389	2	NNC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	2	-9292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCACCGCTACTTGTT	NA	False	NA	NA	False	NA	NA	NA	21156818	21134431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_21135257_21156254
tx.2427	chr11	-	4206	10	ISM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	173547	3	17335	-3	3prime_fragment	FALSE	canonical	3	46	junction_5	9.43986817233753	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCATTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	8401340	8381654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854
tx.24270	chr5	-	3784	5	NNC	ENSMUSG00000044968.17	novel	3724	5	NA	NA	0	210	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	50.6920851810221	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTATGTATTGTAA	NA	False	NA	NA	False	NA	NA	NA	21906394	21867688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906354
tx.24273	chr5	-	5230	17	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	18	904	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_15	90.8021329251136	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAATCTAATTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	23880994	23709545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
tx.24274	chr5	-	5290	17	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	21	911	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	88.2397302806395	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTCTTGAGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	23880991	23709538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_23712719_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
tx.24275	chr5	-	2259	3	ISM	ENSMUSG00000105987.5	ENSMUST00000198984.5	345	4	1511	-1934	-726	2	3prime_fragment	FALSE	canonical	2	7	junction_1	5.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTAGTCTGAGGTCTTC	6772	False	NA	NA	False	NA	NA	NA	23916149	23903291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_23905472_23915363_23915407_23916113
tx.24276	chr5	+	1430	4	FSM	ENSMUSG00000097180.6	ENSMUST00000181574.6	1375	4	-60	5	-60	-5	multi-exon	FALSE	canonical	0	0	junction_3	11.0453610171873	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTGTCGTCAGGTTG	NA	False	NA	NA	False	NA	NA	NA	24055534	24060031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24055620_24057118_24057154_24057715_24057759_24058764
tx.24277	chr5	-	3953	15	NNC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-62	-23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	7.29830844253989	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGGGTGCTGGTTAGCT	NA	False	NA	NA	False	NA	NA	NA	24556664	24524609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556512
tx.24278	chr5	-	2609	10	NNC	ENSMUSG00000038295.15	novel	3902	14	NA	NA	1200	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	8.25967446224258	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	8685	False	NA	NA	False	NA	NA	NA	24594433	24589357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686_24593442_24594360
tx.24279	chr5	-	1164	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-46	191	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	52.4982486917657	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGATATGGTGGTGG	NA	False	NA	-106	True	NA	NA	NA	24628574	24624182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_24624461_24624597_24624679_24624780_24624834_24625245_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
tx.2428	chr11	-	5030	7	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	72	junction_5	48.4389650316079	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	NA	False	NA	NA	NA	8961150	8943136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496
tx.24280	chr5	+	4215	5	ISM	ENSMUSG00000023353.15	ENSMUST00000197513.2	1770	9	17066	-10	16647	0	3prime_fragment	FALSE	canonical	3	144	junction_1	10.7092249953019	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	4731	False	NA	NA	False	NA	NA	NA	24701816	24707045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
tx.24281	chr5	+	5185	2	NIC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	-18	0	intron_retention	FALSE	canonical	3	46	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTTTTAGGTCTAGG	NA	False	NA	NA	False	NA	NA	NA	24791720	24797482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_24795490_24796066
tx.24282	chr5	+	2642	15	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	29	-505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.10749965325	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCAAGTTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	24891013	24914869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_24891093_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
tx.24283	chr5	-	6454	4	ISM	ENSMUSG00000038056.16	ENSMUST00000174734.8	6443	18	19627	-1	952	1	3prime_fragment	FALSE	canonical	3	56	junction_2	3.39934634239519	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTGCACTGTGTTCT	284	False	NA	NA	False	NA	NA	NA	25485446	25476794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137
tx.24284	chr5	+	2040	17	ISM	ENSMUSG00000061576.16	ENSMUST00000101471.4	4491	26	-41	30462	-41	13	5prime_fragment	FALSE	canonical	2	6	junction_2	2.78107443266087	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAAGCTCTGGCTCCCT	NA	False	NA	NA	False	NA	NA	NA	27466931	27902036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847
tx.24285	chr5	+	3551	26	FSM	ENSMUSG00000061576.16	ENSMUST00000101471.4	4491	26	-77	1017	-77	23	multi-exon	TRUE	canonical	2	5	junction_22	2.910395162173	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCTGTCTCTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	27466895	27931481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847_27901896_27914447_27914547_27917605_27917676_27919369_27919565_27923451_27923507_27926042_27926155_27927670_27927730_27928369_27928443_27928538_27928613_27930602
tx.24286	chr5	+	3338	2	FSM	ENSMUSG00000039106.7	ENSMUST00000036227.7	5376	2	628	1410	628	-1410	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAATTTGTGATCATTT	NA	False	NA	NA	False	NA	NA	NA	28047774	28058676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_28048188_28055751
tx.24287	chr5	+	6262	18	NIC	ENSMUSG00000048271.15	novel	6256	18	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	36.3348517719172	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACCCTCATCTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	28522164	28621102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
tx.24288	chr5	+	2274	8	NNC	ENSMUSG00000029130.13	novel	1600	10	NA	NA	-1	934	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	17.9682259240344	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTACTCAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	29400991	29431456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_29401111_29402923_29403019_29403571_29403837_29410666_29410700_29411227_29411297_29411693_29411803_29429114_29429283_29430040
tx.24289	chr5	+	1533	9	NIC	ENSMUSG00000029130.13	novel	1600	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	12.7646974112197	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTAGCTAGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	29400994	29430519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_29401111_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
tx.2429	chr11	-	4605	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	33	2	2	-2	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGAATTCATTTATTA	NA	False	NA	NA	False	NA	NA	NA	8961158	8943138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
tx.24290	chr5	+	1497	9	NIC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	11.1242977306435	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTAGCTAGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	29401003	29430520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_29401083_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
tx.24291	chr5	+	1872	7	FSM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	102	47	10	0	multi-exon	FALSE	canonical	2	2	junction_4	5.53774924194538	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGATTTCCTCAATTGA	2308	False	NA	NA	False	NA	NA	NA	30972086	31023403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
tx.24292	chr5	+	4047	15	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	2	-7	intron_retention	FALSE	canonical	3	26	junction_1	6.44165335602465	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAGGTGTAGTTGC	NA	False	NA	NA	False	NA	NA	NA	31046301	31064003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974
tx.24293	chr5	+	6298	11	ISM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	-21	3916	-3	2884	5prime_fragment	TRUE	canonical	3	26	junction_1	6.64529909033446	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACGTCAGGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	31046296	31056915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109
tx.24294	chr5	+	3245	16	NNC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.9109527030818	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	31046677	31064008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_31046792_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
tx.24295	chr5	+	2673	5	ISM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	3723	-2	-2796	2	3prime_fragment	FALSE	canonical	2	7	junction_3	4.60298815988049	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTCTGCTCTAGTACAT	NA	False	NA	NA	False	NA	NA	NA	31074468	31078623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
tx.24296	chr5	+	1408	8	NNC	ENSMUSG00000029162.16	novel	1257	9	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.034633902192	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTGTCTGTCTGT	1097	False	NA	NA	False	NA	NA	NA	31078888	31088589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_31079352_31082082_31082200_31084089_31084167_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
tx.24298	chr5	+	1348	5	FSM	ENSMUSG00000053856.8	ENSMUST00000202760.4	670	5	3	-681	1	-2	multi-exon	FALSE	canonical	3	9	junction_2	6.86931583201704	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGTGTGTGTGGGAC	NA	False	NA	NA	False	NA	NA	NA	31265663	31269868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31265766_31266230_31266347_31267521_31267664_31268456_31268524_31268947
tx.24299	chr5	+	939	7	FSM	ENSMUSG00000029149.15	ENSMUST00000054829.13	904	7	-32	-3	-17	1	multi-exon	FALSE	canonical	3	42	junction_6	21.1344899788631	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGATTACAGTTACT	NA	False	NA	NA	False	NA	NA	NA	31409017	31410544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410441
tx.243	chr1	+	3346	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	4	7	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	12.9479728143057	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAATTTTAATGTCT	NA	False	NA	NA	False	NA	NA	NA	44158120	44183677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_44158356_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
tx.2430	chr11	-	4601	8	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	2	-3	intron_retention	FALSE	canonical	3	72	junction_5	46.4880937137979	130	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGGAATTCATTTATT	NA	False	NA	NA	False	NA	NA	NA	8961158	8943139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496_8960625_8961058
tx.24300	chr5	+	5243	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	34.5219929210486	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2005	False	NA	NA	False	NA	NA	NA	33021056	33149016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
tx.24301	chr5	+	5351	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	9	combination_of_known_junctions	TRUE	canonical	3	35	junction_25	36.3321480940489	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2004	False	NA	NA	False	NA	NA	NA	33021055	33149014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
tx.24302	chr5	-	179	2	Antisense	novelGene_ENSMUSG00000089080.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	415	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATATCCTTGCTGAT	NA	False	NA	NA	False	NA	NA	NA	33077222	33052242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_-_33052369_33077169
tx.24303	chr5	+	3050	3	FSM	ENSMUSG00000048142.10	ENSMUST00000056355.9	6529	3	626	2853	626	2220	multi-exon	FALSE	canonical	2	3	junction_1	1.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTGCCTTTTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	34153953	34160407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_34154555_34155712_34155878_34158123
tx.24304	chr5	-	9183	2	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	87	-3038	-7	3038	intron_retention	FALSE	canonical	3	463	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTCAAAGTTTTTTG	9413	False	NA	NA	False	NA	NA	NA	34326784	34308185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_34311451_34320866
tx.24305	chr5	+	1718	3	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	39278	-709	-514	0	3prime_fragment	FALSE	canonical	3	85	junction_2	5.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	34622958	34643800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_34623792_34633069_34633152_34642997
tx.24306	chr5	-	2001	2	ISM	ENSMUSG00000059866.14	ENSMUST00000030991.14	2022	7	13655	-8	1310	8	intron_retention	FALSE	canonical	3	123	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTGGAATGTGTGC	2927	False	NA	NA	False	NA	NA	NA	34657652	34653422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_34654295_34656523
tx.24307	chr5	-	1864	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	46	-4	-6	1	multi-exon	FALSE	canonical	3	69	junction_12	91.0092715057098	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	NA	False	NA	NA	NA	34794490	34790988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
tx.24308	chr5	+	4546	13	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	133671	1026	8964	-1026	3prime_fragment	FALSE	canonical	3	87	junction_4	4.18578945162479	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGCATGTTTCTTCTC	6270	False	NA	NA	False	NA	NA	NA	35052758	35068852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
tx.24309	chr5	+	2084	10	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	136835	3136	12128	-3136	3prime_fragment	FALSE	canonical	3	87	junction_1	3.16227766016838	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTATGCCCGTGTAA	9434	False	NA	NA	False	NA	NA	NA	35055922	35066742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
tx.2431	chr11	-	5141	6	ISM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	8	4	8	-4	intron_retention	FALSE	canonical	3	104	junction_5	41.0881978188384	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTTGGAATTCATTTAT	NA	False	NA	NA	False	NA	NA	NA	8961183	8943140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240
tx.24310	chr5	+	5346	17	FSM	ENSMUSG00000029101.17	ENSMUST00000030984.14	5472	17	-22	148	-22	5	multi-exon	TRUE	canonical	2	8	junction_15	4.70206071845101	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGGCTGGAAACTCCT	8609	False	NA	NA	False	NA	NA	NA	35106766	35190791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
tx.24311	chr5	-	3562	10	NIC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-9	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	27.9125618872778	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGAACAGTCCCAAT	7617	False	NA	NA	False	NA	NA	NA	35732423	35713563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35731423_35731539_35731902
tx.24312	chr5	-	1957	7	FSM	ENSMUSG00000029096.16	ENSMUST00000114233.3	1901	7	-56	0	-56	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAATCTAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	35836872	35818902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_35819609_35821306_35821422_35822757_35822791_35823393_35823589_35825526_35825750_35828375_35828476_35836287
tx.24313	chr5	+	4093	11	ISM	ENSMUSG00000029095.18	ENSMUST00000114205.8	2579	18	-36	39989	8	956	5prime_fragment	FALSE	canonical	3	68	junction_5	9.50789145920377	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAGGAGAAGAAGAAG	1521	False	NA	NA	False	NA	NA	NA	35915231	36001504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624
tx.24314	chr5	+	1941	15	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-22	6	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	19.8329760443437	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAGCCTAAGAATGTG	1535	False	NA	NA	False	NA	NA	NA	35915245	36015536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169
tx.24315	chr5	-	5262	27	NNC	ENSMUSG00000029093.15	novel	5707	27	NA	NA	44272	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_26	3.95836317854419	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAACAGGGTCGGTCTC	5278	False	NA	NA	False	NA	NA	NA	36478990	36174526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36478873
tx.24316	chr5	+	5392	10	NNC	ENSMUSG00000050248.12	novel	2796	12	NA	NA	-23	-11425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.7194104181711	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCATGGCTTTAGCCTT	8819	False	NA	NA	False	NA	NA	NA	37495819	37533683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37529263_37531111_37531410
tx.24317	chr5	-	4128	8	NIC	ENSMUSG00000029127.16	novel	420	5	NA	NA	-4	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	15.5471632690432	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTGGTCATGGTGCTT	NA	False	NA	NA	False	NA	NA	NA	38377779	38347075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_38349482_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
tx.24318	chr5	-	2751	7	FSM	ENSMUSG00000029127.16	ENSMUST00000126267.8	2721	7	-28	-2	-10	2	multi-exon	FALSE	canonical	2	5	junction_4	14.1391890385081	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATTTTGTAAATTTT	NA	False	NA	NA	False	NA	NA	NA	38377785	38357587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38370651_38371728_38373790_38373958_38377666
tx.24319	chr5	-	7257	3	FSM	ENSMUSG00000029127.16	ENSMUST00000114113.3	2645	3	21	-4633	-2	-3600	multi-exon	FALSE	canonical	3	43	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAATGTGTGTGGCAGG	NA	False	NA	NA	False	NA	NA	NA	38377777	38364748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_38371728_38373790_38373958_38377666
tx.2432	chr11	+	1220	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	33	-1	-8	1	multi-exon	FALSE	canonical	3	2502	junction_1	159.654656602932	1198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTCTGCGGTA	NA	False	NA	NA	False	NA	NA	NA	9068539	9086168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
tx.24320	chr5	+	1405	8	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	791.240204504605	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCTATGATAACAAATT	NA	False	NA	NA	False	NA	NA	NA	38377852	38391646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_38377980_38381970_38382142_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
tx.24321	chr5	+	5486	8	NIC	ENSMUSG00000067367.10	novel	1504	9	NA	NA	2	3	intron_retention	FALSE	canonical	3	2026	junction_4	139.690912447475	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTATCTATGATAACAA	NA	False	NA	NA	False	NA	NA	NA	38377874	38391643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
tx.24322	chr5	+	3392	6	FSM	ENSMUSG00000051596.16	ENSMUST00000114099.6	3141	6	-245	-6	-245	5	multi-exon	FALSE	canonical	1	3	junction_5	1.93907194296653	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCCTCTTGCGAATTT	NA	False	NA	NA	False	NA	NA	NA	38434502	38461557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_38435169_38445240_38445378_38451832_38451892_38455200_38455332_38456966_38457875_38460066
tx.24323	chr5	-	8245	3	ISM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-21	0	-14	0	intron_retention	FALSE	canonical	3	72	junction_2	106	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTCTCTCATTTCG	NA	False	NA	NA	False	NA	NA	NA	38842114	38825828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_38832197_38839827_38840126_38840535
tx.24324	chr5	+	1462	9	FSM	ENSMUSG00000029082.18	ENSMUST00000101237.8	2856	9	-182	1576	-176	0	multi-exon	FALSE	canonical	3	10	junction_6	2.97647022494766	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTATTTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	43976050	43999752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_43976436_43977819_43977947_43978951_43979088_43979608_43979692_43982669_43982747_43983605_43983699_43994802_43994890_43997772_43997833_43999338
tx.24325	chr5	-	1198	2	FSM	ENSMUSG00000048373.9	ENSMUST00000061299.9	1161	2	-40	3	-25	0	multi-exon	FALSE	canonical	3	24	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACCACTGTTTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	44139146	44136204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_44137311_44139054
tx.24326	chr5	-	5336	13	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	-18	0	intron_retention	FALSE	canonical	3	70	junction_1	11.6213405231735	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTGAATTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	44383986	44332500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_44334525_44336202_44336364_44340039_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
tx.24327	chr5	-	3669	6	ISM	ENSMUSG00000015806.13	ENSMUST00000118097.8	1232	7	-16	0	-11	0	intron_retention	FALSE	canonical	3	819	junction_4	96.2330504556517	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	NA	False	NA	NA	NA	45607529	45591394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917
tx.24328	chr5	+	6239	2	ISM	ENSMUSG00000031558.16	ENSMUST00000174061.8	3350	3	6	-1686	2	1686	intron_retention	FALSE	canonical	3	177	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGGTTTCCACTTAAT	NA	False	NA	NA	False	NA	NA	NA	48140501	48149360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_48142561_48145180
tx.24329	chr5	-	8137	7	NIC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	65	2	intron_retention	FALSE	canonical	3	38	junction_2	4.6785562825394	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTTTGATCTCTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	52723739	52690856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52721380_52723259
tx.2433	chr11	+	1659	8	ISM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	306	0	26	0	3prime_fragment	FALSE	canonical	3	2674	junction_7	130.54063406793	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTCTGCGGT	NA	False	NA	NA	False	NA	NA	NA	9068812	9086167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
tx.24330	chr5	-	5164	11	FSM	ENSMUSG00000029173.13	ENSMUST00000150709.8	5185	11	2	19	2	-19	multi-exon	FALSE	canonical	2	6	junction_9	24.1412510032103	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTGCAAATAATCTAC	NA	False	NA	NA	False	NA	NA	NA	52827048	52797447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826307_52826396_52826916
tx.24331	chr5	-	4096	5	ISM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	9	20697	9	-4441	5prime_fragment	FALSE	canonical	3	71	junction_3	7.29297607290741	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAAAGCACAGTATGAG	NA	False	NA	NA	False	NA	NA	NA	52827041	52818125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
tx.24332	chr5	+	3749	9	NIC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	134	junction_2	15.5638804608619	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCATTGTTCTGTGTA	NA	False	NA	NA	False	NA	NA	NA	52898916	52926680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_52899311_52905710_52905848_52907949_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
tx.24333	chr5	+	3056	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	-22	0	14	0	multi-exon	FALSE	canonical	0	0	junction_2	68.4301933215499	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTCTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	52898929	52926682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_52899311_52900833_52900902_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
tx.24334	chr5	+	1898	4	FSM	ENSMUSG00000060512.8	ENSMUST00000081747.8	2008	4	109	1	-48	-1	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGGTATATGTGTCTCC	1894	False	NA	NA	False	NA	NA	NA	63969814	64056967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_63969939_64033792_64033843_64053772_64053827_64055297
tx.24335	chr5	+	2482	6	ISM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	-4	10627	-4	3825	5prime_fragment	FALSE	canonical	3	58	junction_5	13.0843417870369	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGTGTTTAGAAGGGAT	NA	False	NA	NA	False	NA	NA	NA	65264877	65314822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397
tx.24336	chr5	+	1219	6	NNC	ENSMUSG00000054920.13	novel	3149	11	NA	NA	9	-3942	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	25.9121593079388	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGAGGGCACTTAAAT	NA	False	NA	NA	False	NA	NA	NA	65264890	65307055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65306880
tx.24337	chr5	-	4039	6	NNC	ENSMUSG00000037822.13	novel	1177	6	NA	NA	43	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	187.862715832599	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCGTTTTCTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	65650171	65604189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65634668_65634723_65650078
tx.24338	chr5	+	4698	6	FSM	ENSMUSG00000029203.17	ENSMUST00000202679.4	4682	6	-15	-1	0	1	multi-exon	FALSE	canonical	3	526	junction_1	338.408628731597	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTCCCCATTATT	NA	False	NA	NA	False	NA	NA	NA	65694618	65756273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_65694890_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
tx.24339	chr5	-	5021	8	NIC	ENSMUSG00000070780.12	novel	4895	8	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	16.1927169317769	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAAGACTTTCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	66309106	66173898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308395_66308529_66308881
tx.2434	chr11	-	2872	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	3	86	3	-86	multi-exon	FALSE	canonical	3	411	junction_2	109.5	746	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGAGTTGCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	11758956	11750373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_11753064_11756095_11756216_11758894
tx.24340	chr5	-	6456	16	NNC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	23573	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	25.1761792176653	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGTAATGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	66752410	66456070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
tx.24341	chr5	+	8883	7	NIC	ENSMUSG00000037720.17	novel	6247	8	NA	NA	0	-69	intron_retention	FALSE	canonical	3	347	junction_1	41.2744876810522	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATGTTTTATCTAACAT	NA	False	NA	NA	False	NA	NA	NA	67418046	67448735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67424713_67425853_67425988_67441482_67441567_67443438
tx.24342	chr5	+	2684	4	ISM	ENSMUSG00000107385.4	ENSMUST00000201973.4	2764	5	24	700	18	-700	intron_retention	TRUE	canonical	3	7	junction_2	4.98887651569859	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTTTCTTGCGTCAAC	8050	False	NA	NA	False	NA	NA	NA	67621263	67627474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_67621362_67623669_67623772_67624135_67624364_67625218
tx.24343	chr5	-	853	7	FSM	ENSMUSG00000037685.16	ENSMUST00000113652.8	854	7	-1	2	-1	-2	multi-exon	FALSE	canonical	3	53	junction_2	8.34166250416147	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTCATGATTCTTAATTA	NA	False	NA	NA	False	NA	NA	NA	68004775	67938223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
tx.24344	chr5	-	562	3	FSM	ENSMUSG00000049387.11	ENSMUST00000050129.6	542	3	-15	-5	-15	5	multi-exon	FALSE	canonical	3	51	junction_2	6	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTGTTGAAAACTATCA	NA	False	NA	NA	False	NA	NA	NA	71705563	71600161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_71600613_71660793_71660857_71705515
tx.24345	chr5	-	3634	23	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_22	28.3862089667524	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGTGATAAAGGATAT	NA	False	NA	NA	False	NA	NA	NA	72717022	72670646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72717001
tx.24346	chr5	+	4803	7	NNC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-2	4477	intron_retention	FALSE	canonical	0	0	junction_6	91.6383289531915	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGAGTTGGACTATCAT	NA	False	NA	NA	False	NA	NA	NA	73071709	73119234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73116052
tx.24347	chr5	+	2532	9	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	7	-3	intron_retention	FALSE	canonical	3	168	junction_1	264.563319453019	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGCTGTCTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	73450156	73471409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
tx.24348	chr5	-	4005	5	NIC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	53	-2	intron_retention	FALSE	canonical	3	39	junction_4	20.3638773321782	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCAGTTTCTTCGTGAC	NA	False	NA	NA	False	NA	NA	NA	73805080	73790093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_73793042_73796725_73797324_73798025_73798212_73801614_73801825_73805017
tx.24349	chr5	-	6591	5	FSM	ENSMUSG00000029229.9	ENSMUST00000162397.3	521	5	-320	-5750	133	5750	multi-exon	FALSE	canonical	3	625	junction_3	25.9855729203726	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAATTTATATACCT	NA	False	NA	NA	False	NA	NA	NA	75205302	75166090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
tx.2435	chr11	-	1567	11	NNC	ENSMUSG00000020182.17	novel	1954	15	NA	NA	7366	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	32.5590233268751	15	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	False	NA	NA	False	NA	NA	NA	11823263	11764102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133
tx.24350	chr5	-	7637	23	NIC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	-208	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	11.4989219760624	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGCATATTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	76452847	76360026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
tx.24351	chr5	-	7710	22	NIC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	11	333	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	14.2370600037726	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTAGTTGGTGATTT	NA	False	NA	NA	False	NA	NA	NA	76452384	76359690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
tx.24352	chr5	+	7131	10	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	-20	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.2659863237109	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTTGGCACTGATGGA	NA	False	NA	NA	False	NA	NA	NA	76805509	77021390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77018363
tx.24353	chr5	+	6008	4	ISM	ENSMUSG00000036377.20	ENSMUST00000121160.8	6921	11	104163	-216	-2311	1	3prime_fragment	FALSE	canonical	1	2	junction_3	3.39934634239519	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGCACTGATGGAATG	2624	False	NA	NA	False	NA	NA	NA	77004377	77021393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_77007002_77013846_77014038_77015018_77015182_77018363
tx.24354	chr5	-	630	4	FSM	ENSMUSG00000053030.12	ENSMUST00000065216.11	631	4	1	0	1	0	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTCGTCTTTTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	77359317	77352953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_77353273_77354775_77354886_77357579_77357642_77359178
tx.24355	chr5	-	2490	5	NIC	ENSMUSG00000036285.11	novel	2815	3	NA	NA	-349	16	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	64.2222702806433	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATCATTAATGGGATATG	NA	False	NA	NA	False	NA	NA	NA	77458280	77451209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_77451673_77452032_77452165_77454120_77454324_77455399_77455565_77456753
tx.24356	chr5	-	5099	3	Antisense	novelGene_ENSMUSG00000037605.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	3.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTCCCTTGTGGGCA	NA	False	NA	NA	False	NA	NA	NA	81703956	81697349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_-_81702330_81703680_81703745_81703901
tx.24357	chr5	-	3201	12	NNC	ENSMUSG00000061259.12	novel	2716	10	NA	NA	-33605	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	1.49931113658824	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTGCCTAATTATTTAT	NA	False	NA	NA	False	NA	NA	NA	86554884	86450075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_86451632_86454125_86454269_86457122_86457383_86474266_86474445_86475476_86475516_86478929_86479085_86485085_86485154_86486639_86486759_86487338_86487461_86521203_86521306_86545574_86545987_86554837
tx.24358	chr5	-	5079	21	NIC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	0	-2	intron_retention	FALSE	canonical	3	262	junction_12	29.9337184459265	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTTGTGAAATCTCTCC	NA	False	NA	NA	False	NA	NA	NA	92457848	92431870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_92434730_92436325_92436488_92437598_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
tx.24359	chr5	-	3040	2	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	59265	0	59265	0	3prime_fragment	FALSE	canonical	3	142	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCACTGTGAACTGTCTC	NA	False	NA	NA	False	NA	NA	NA	92594231	92589172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_92592144_92594162
tx.2436	chr11	-	2022	14	NNC	ENSMUSG00000020182.17	novel	1954	15	NA	NA	-1764	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.0072107260464	7	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	3874	False	NA	NA	False	NA	NA	NA	11832393	11764102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11832251
tx.24360	chr5	-	9900	8	ISM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	53897	3	20935	-3	3prime_fragment	TRUE	canonical	3	24	junction_5	7.47239818892687	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACACTGGTCTTGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	96255952	96218194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074
tx.24361	chr5	-	3896	2	ISM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	3780	23	3620	-23	3prime_fragment	FALSE	canonical	3	375	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAAAATAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	100573614	100568723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_100568832_100569826
tx.24362	chr5	-	2226	11	NIC	ENSMUSG00000046709.19	novel	6761	13	NA	NA	29	762	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAGAAAGAACATATGT	NA	False	NA	NA	False	NA	NA	NA	103174832	103060232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_103061194_103073937_103074016_103076088_103076153_103111332_103111458_103114311_103114495_103135068_103135141_103137485_103137652_103138369_103138509_103139734_103139794_103144449_103144580_103174583
tx.24363	chr5	+	3125	7	ISM	ENSMUSG00000034573.15	ENSMUST00000196014.5	2608	16	-20	31249	-20	-5363	5prime_fragment	FALSE	canonical	1	1	junction_6	19.8697145313051	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAATGTGTGTCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	103573085	103646357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103644188
tx.24364	chr5	+	1904	10	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	50383	48	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	5.55999822364302	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAACCAATTCAGACATC	4815	False	NA	NA	False	NA	NA	NA	103727814	103746217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_103727978_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
tx.24365	chr5	-	2786	7	NNC	ENSMUSG00000029321.2	novel	2124	6	NA	NA	-11438	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.763762615825973	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGAACCCTTTCGTGTT	6480	False	NA	NA	False	NA	NA	NA	103788707	103753580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_103754614_103756846_103757005_103760235_103760409_103765496_103765586_103766221_103766341_103776721_103777741_103788512
tx.24366	chr5	+	5173	3	NIC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	7505	-12	intron_retention	FALSE	canonical	3	355	junction_1	1	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGGTGACTTGTGTT	375	False	NA	NA	False	NA	NA	NA	104202991	104213233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_104207649_104209539_104209625_104212802
tx.24367	chr5	+	1409	2	FSM	ENSMUSG00000097392.5	ENSMUST00000096452.7	5181	2	4	3768	4	-3768	multi-exon	FALSE	canonical	3	13	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGATAAGGTAGAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	104656221	104666481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_104656438_104665288
tx.24368	chr5	-	2256	6	NIC	ENSMUSG00000043410.17	novel	1440	10	NA	NA	-4	-13794	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	4.22374241638858	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATGTTACTTGTATGT	NA	False	NA	NA	False	NA	NA	NA	107074128	107063730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_107065494_107066242_107066356_107068828_107068943_107070678_107070777_107072696_107072799_107074062
tx.24369	chr5	-	1078	5	NIC	ENSMUSG00000043410.17	novel	5018	40	NA	NA	16	-14838	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	3.96074487943871	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTAGTTAGCCGTAAGT	NA	False	NA	NA	False	NA	NA	NA	107074108	107064774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_107065494_107066242_107066356_107070678_107070777_107072696_107072799_107074062
tx.2437	chr11	+	1077	3	NNC	ENSMUSG00000086391.2	novel	1075	4	NA	NA	13994	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	3	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGTAAATATTTTATTT	2713	False	NA	NA	False	NA	NA	NA	11832116	11835321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_11832389_11832956_11833080_11834639
tx.24370	chr5	+	1603	7	FSM	ENSMUSG00000029279.16	ENSMUST00000112677.10	1607	7	8	-4	8	4	multi-exon	FALSE	canonical	2	3	junction_2	0.74535599249993	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGTGTTTGCCCTCA	NA	False	NA	NA	False	NA	NA	NA	107479048	107498611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_107479174_107489165_107489308_107489885_107490126_107491418_107491557_107493001_107493117_107496331_107496505_107497941
tx.24371	chr5	-	1839	6	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	20	630	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	74.2293742395825	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTACTAATGTTTTAG	NA	False	NA	NA	False	NA	NA	NA	108134931	108056938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108108617_108108776_108134814
tx.24372	chr5	+	3209	3	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-84	94759	-45	-706	5prime_fragment	FALSE	canonical	2	80	junction_2	6.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTACATTGTCTTTT	1059	False	NA	NA	False	NA	NA	NA	108280695	108286735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_108280865_108283287_108283431_108283838
tx.24373	chr5	+	3614	9	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-330	2128	-268	-17	intron_retention	FALSE	canonical	3	99	junction_1	13.7658998979362	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACATTGTTCACACTT	NA	False	NA	NA	False	NA	NA	NA	108777367	108794520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033
tx.24374	chr5	+	1043	2	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTTTTGCTTGAATT	NA	False	NA	NA	False	NA	NA	NA	110014313	110018029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_110014679_110017351
tx.24375	chr5	-	1819	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	150	junction_7	31.16185527997	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	NA	False	NA	NA	NA	110256061	110251841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110255064_110255721
tx.24376	chr5	+	4856	24	NIC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	0	44	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	28.0402761906312	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGGTAATGGTACATA	NA	False	NA	NA	False	NA	NA	NA	110324744	110371111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_110324916_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
tx.24377	chr5	-	1896	11	FSM	ENSMUSG00000029503.17	ENSMUST00000195985.5	2096	11	201	-1	-35	1	multi-exon	FALSE	canonical	1	1	junction_9	1.9723082923316	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCAATTCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	110490877	110487676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_110488449_110488533_110488600_110488721_110488816_110488966_110489098_110489416_110489556_110489639_110489721_110489870_110489968_110490043_110490120_110490198_110490271_110490365_110490502_110490645
tx.24378	chr5	-	3014	3	Intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	110616960	110612345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_110614678_110615616_110615676_110616337
tx.24379	chr5	-	3970	16	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	87185	3	8825	2	3prime_fragment	FALSE	canonical	3	85	junction_11	16.5709250060326	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTCTGTCTTAATA	8563	False	NA	NA	False	NA	NA	NA	110831208	110812241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001
tx.2438	chr11	-	4494	14	ISM	ENSMUSG00000020176.18	ENSMUST00000093321.12	5061	17	69774	0	3015	0	3prime_fragment	TRUE	canonical	3	40	junction_4	5.85727686793892	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	11917627	11880507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531
tx.24380	chr5	+	1751	4	ISM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	0	24277	0	-25	intron_retention	FALSE	canonical	3	120	junction_1	91.2249965744039	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTTGGGATAAGCG	9199	False	NA	NA	False	NA	NA	NA	110987865	110997734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495
tx.24381	chr5	+	8079	23	FSM	ENSMUSG00000033209.18	ENSMUST00000156290.9	10688	23	-14	2623	-14	-2622	multi-exon	TRUE	canonical	1	3	junction_2	5.32128891364483	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGGCATTTTAGAACTA	NA	False	NA	NA	False	NA	NA	NA	111027654	111435023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_111027855_111040697_111040977_111232887_111233036_111248559_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111429745_111429770_111430636_111430767_111431810_111431919_111432857
tx.24382	chr5	+	1749	6	ISM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	27192	0	3	0	3prime_fragment	FALSE	canonical	3	300	junction_2	15.9323570133235	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	2355	False	NA	NA	False	NA	NA	NA	112451764	112463221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
tx.24383	chr5	+	2283	7	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	6768	0	-2516	0	3prime_fragment	FALSE	canonical	3	100	junction_2	12.8116700273184	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAAGTATATGGGTGTT	4615	False	NA	NA	False	NA	NA	NA	112480991	112485939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
tx.24384	chr5	-	3887	5	FSM	ENSMUSG00000029346.13	ENSMUST00000155756.8	871	5	-3015	-1	3	1	multi-exon	FALSE	canonical	3	38	junction_3	40.1154583670684	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	112490903	112485256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_112485608_112485867_112485914_112486183_112486434_112487584_112487684_112487762
tx.24385	chr5	-	2105	6	NNC	ENSMUSG00000029348.12	novel	808	4	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	10.6320270880016	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTAAATGTAATCATCCT	NA	False	NA	NA	False	NA	NA	NA	112542728	112533318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_112533728_112534624_112534739_112539023_112540122_112541325_112541450_112541650_112541866_112542583
tx.24386	chr5	-	3461	3	FSM	ENSMUSG00000029348.12	ENSMUST00000031291.9	2678	3	-782	-1	-782	1	multi-exon	FALSE	canonical	3	26	junction_1	1.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGGTCAAGTAGCTTG	NA	False	NA	NA	False	NA	NA	NA	112540861	112532218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_112533728_112534624_112534739_112539023
tx.24387	chr5	-	2184	3	FSM	ENSMUSG00000029352.15	ENSMUST00000155042.8	1419	3	419	-1184	419	-1	multi-exon	FALSE	canonical	3	12	junction_1	4.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTCTGTGTCACTTC	NA	False	NA	NA	False	NA	NA	NA	113227838	113223705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_113225544_113226248_113226382_113227625
tx.24388	chr5	-	8630	12	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-17	-1475	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	7.20192811648668	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTCCTTGGACATGG	NA	False	NA	NA	False	NA	NA	NA	113369119	113235663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113369076
tx.24389	chr5	-	8572	13	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-37	-1700	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	8.71899267882095	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACCAAGAAGTAAATTGG	NA	False	NA	NA	False	NA	NA	NA	113369139	113235888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113341626_113341774_113369076
tx.2439	chr11	-	5060	17	FSM	ENSMUSG00000020176.18	ENSMUST00000093321.12	5061	17	1	0	1	0	multi-exon	FALSE	canonical	3	35	junction_14	7.38135319572231	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	11987400	11880507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11987191
tx.24390	chr5	-	4141	9	ISM	ENSMUSG00000051339.11	ENSMUST00000211733.2	10238	13	38156	2603	-19729	-2603	3prime_fragment	FALSE	canonical	3	16	junction_2	5.44144971491973	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTCTAACTTGTCTT	9148	False	NA	NA	False	NA	NA	NA	113330946	113236791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919
tx.24391	chr5	+	4195	9	FSM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	102	5	102	2	multi-exon	FALSE	canonical	2	3	junction_1	15.7276627316331	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCCAGTTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	113638414	113727781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_113638807_113688483_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
tx.24392	chr5	-	2065	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTG	NA	False	NA	NA	False	NA	NA	NA	113734533	113710015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_-_113711932_113734384
tx.24393	chr5	+	1488	2	ISM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-4	2194	-4	-1435	intron_retention	FALSE	canonical	3	687	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	3646	False	NA	NA	False	NA	NA	NA	113910859	113913665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_113911006_113912323
tx.24394	chr5	-	2154	2	FSM	ENSMUSG00000054675.6	ENSMUST00000067853.6	2242	2	88	0	18	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCTGGATTATCTGCA	6780	False	NA	NA	False	NA	NA	NA	113938489	113931789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_113933815_113938360
tx.24395	chr5	-	6207	14	NIC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-13	591	combination_of_known_splicesites	TRUE	canonical	1	1	junction_4	109.278862651865	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTATTTTAGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	114131853	114077234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
tx.24396	chr5	+	2573	5	ISM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	19169	1212	8356	-1212	3prime_fragment	FALSE	canonical	3	48	junction_2	4.9180788932265	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGCGGTGCTTTAGT	9270	False	NA	NA	False	NA	NA	NA	114257544	114261569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
tx.24397	chr5	-	1041	4	NIC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	238.844905511692	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7967	False	NA	NA	False	NA	NA	NA	114266290	114261986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_114262316_114263592_114263792_114265586_114265831_114266021
tx.24398	chr5	+	2948	13	Fusion	ENSMUSG00000054256.12_ENSMUSG00000087292.2	novel	806	9	NA	NA	-7	0	multi-exon	FALSE	canonical	2	9	junction_2	32.3525501313266	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	4775	False	NA	NA	False	NA	NA	NA	115497148	115593757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr5_+_115497328_115548673_115548759_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
tx.24399	chr5	+	3065	14	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	24.7218849935262	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	2400	False	NA	NA	False	NA	NA	NA	115567668	115593757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115588273_115588343_115588845_115589034_115589515_115589580_115591884
tx.244	chr1	+	3301	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	16	253	5	7	multi-exon	FALSE	canonical	3	41	junction_1	6.90857402520436	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAATTTTAATGTCT	NA	False	NA	NA	False	NA	NA	NA	44159143	44183677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
tx.2440	chr11	-	5123	18	NNC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	16.8867590069198	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTGTCCTGTCGTGT	NA	False	NA	NA	False	NA	NA	NA	11987390	11880509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11907751_11907827_11917531_11917686_11920422_11920643_11937595_11937675_11987191
tx.24400	chr5	-	3550	10	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	-28	-2	intron_retention	FALSE	canonical	0	0	junction_6	244.676859208424	8	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAAGTTGCCACGTGGT	NA	False	NA	NA	False	NA	NA	NA	117254206	117229751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
tx.24402	chr5	+	2421	2	ISM	ENSMUSG00000066894.15	ENSMUST00000139026.2	2653	3	1718	-2	1718	2	3prime_fragment	FALSE	canonical	3	23	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTATGGTCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	117489692	117493072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_117489857_117490815
tx.24403	chr5	+	1245	2	FSM	ENSMUSG00000086075.2	ENSMUST00000140833.2	3492	2	-480	2727	-480	187	multi-exon	FALSE	canonical	3	12	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGAAGTATGGCAGTAG	NA	False	NA	NA	False	NA	NA	NA	117526723	117528836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_117527351_117528218
tx.24404	chr5	+	7258	29	NNC	ENSMUSG00000029361.19	novel	4591	29	NA	NA	-3972	1807	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.0610550480282	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCAAGGTGGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	118001206	118094236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_118001439_118004903_118005992_118017348_118017476_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
tx.24405	chr5	-	5796	8	FSM	ENSMUSG00000032867.9	ENSMUST00000201545.2	1937	8	20	-3879	20	3879	multi-exon	FALSE	canonical	3	339	junction_5	29.5476094547392	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTCAGACCAATTATTT	NA	False	NA	NA	False	NA	NA	NA	118293471	118211237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
tx.24406	chr5	+	9745	31	FSM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	-454	5	-414	-5	multi-exon	FALSE	canonical	3	9	junction_4	21.22063984793	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTCGAGTGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	118698329	118903498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
tx.24407	chr5	-	3758	2	ISM	ENSMUSG00000029600.11	ENSMUST00000136070.8	870	3	-774	2020	-774	-4	5prime_fragment	FALSE	canonical	3	77	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGGTAGTGTGTTACT	5541	False	NA	NA	False	NA	NA	NA	120751428	120747126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_120749795_120750338
tx.24408	chr5	-	3956	6	NIC	ENSMUSG00000066861.15	novel	1489	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	61	junction_4	120.998181804521	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	121025652	121014784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121020133_121023835_121024125_121025442
tx.24409	chr5	-	2277	12	NIC	ENSMUSG00000042726.15	novel	2425	12	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	10.4920276700026	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCTTGTGATTCTTTC	3589	False	NA	NA	False	NA	NA	NA	121523675	121509792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_121510476_121510665_121510739_121511401_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
tx.2441	chr11	-	4037	6	ISM	ENSMUSG00000020173.18	ENSMUST00000174874.8	5451	15	144999	0	102495	0	3prime_fragment	FALSE	canonical	3	419	junction_3	31.5176141228996	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	NA	False	NA	NA	NA	12217145	12186677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855
tx.24410	chr5	-	2977	13	NIC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	214	0	intron_retention	FALSE	canonical	0	0	junction_8	52.8195960058596	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	NA	False	NA	NA	NA	121683754	121663114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_121663303_121663725_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
tx.24411	chr5	-	2038	14	FSM	ENSMUSG00000029454.16	ENSMUST00000111783.8	1513	14	-529	4	176	0	multi-exon	TRUE	canonical	0	0	junction_9	58.7492918250155	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	NA	False	NA	NA	NA	121683792	121663114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
tx.24412	chr5	-	1584	9	ISM	ENSMUSG00000029456.13	ENSMUST00000137789.8	2071	11	3315	-3	1197	0	3prime_fragment	FALSE	canonical	3	24	junction_2	15.204851199535	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTGAGCTAGATTT	NA	False	NA	NA	False	NA	NA	NA	121769645	121759088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339
tx.24413	chr5	-	194	2	Intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGTGAAGAGAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	122577257	122437334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_122437480_122577208
tx.24414	chr5	+	3254	10	NIC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	16	-460	intron_retention	FALSE	canonical	3	226	junction_7	30.3498123735734	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGAGACTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	122560522	122582515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122579504_122581866
tx.24415	chr5	-	2756	18	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	22	-291	combination_of_known_junctions	FALSE	canonical	1	2	junction_17	17.896666098451	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATAGTTGTGTCAAGAT	1282	False	NA	NA	False	NA	NA	NA	122752542	122688561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122749005_122749171_122752256
tx.24416	chr5	-	2579	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-58	230	8	-214	multi-exon	FALSE	canonical	3	10	junction_2	25.1434992702996	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTTTTTTTTAA	4641	False	NA	NA	False	NA	NA	NA	122917454	122871480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
tx.24417	chr5	-	4713	15	NIC	ENSMUSG00000029471.14	novel	2751	16	NA	NA	0	-3	intron_retention	TRUE	canonical	3	5	junction_2	23.9604265574786	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCGGGCCTCTCGGGG	4623	False	NA	NA	False	NA	NA	NA	122917472	122869235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_122872309_122875495_122875597_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
tx.24418	chr5	+	3256	3	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	14711	2349	14602	-2349	3prime_fragment	FALSE	canonical	3	210	junction_1	5.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTTGTAGTTTAATATT	7721	False	NA	NA	False	NA	NA	NA	123002821	123007005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_123004970_123005182_123005385_123006099
tx.24419	chr5	-	8254	27	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-8	0	intron_retention	FALSE	canonical	2	5	junction_18	15.4693818605634	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGGTTGGTTTTTGG	9894	False	NA	NA	False	NA	NA	NA	123822396	123715857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
tx.2442	chr11	-	5441	14	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_6	74.428711772371	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	NA	False	NA	NA	NA	12414954	12186675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
tx.24420	chr5	-	7988	26	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	3	junction_18	15.0279739153354	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTTGGTTGGTTTTTG	9898	False	NA	NA	False	NA	NA	NA	123822392	123715858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123773236_123773342_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
tx.24421	chr5	-	6234	25	FSM	ENSMUSG00000049550.18	ENSMUST00000111561.8	5883	25	-362	11	-19	0	multi-exon	FALSE	canonical	2	3	junction_17	15.5321686795144	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATGTTTTGGGTCTCT	9590	False	NA	NA	False	NA	NA	NA	123822700	123715880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
tx.24422	chr5	-	1954	11	FSM	ENSMUSG00000029422.16	ENSMUST00000057795.12	2270	11	26	290	0	4	multi-exon	FALSE	canonical	3	64	junction_7	167.947640650293	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTTAATTTAAGTTAC	4349	False	NA	NA	False	NA	NA	NA	123887449	123866782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
tx.24423	chr5	+	1847	5	FSM	ENSMUSG00000023707.14	ENSMUST00000131094.8	708	5	-31	-1108	-12	-1	multi-exon	FALSE	canonical	3	73	junction_4	13.2759180473518	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTTGCTATTATTTA	NA	False	NA	NA	False	NA	NA	NA	124250371	124253545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127
tx.24424	chr5	+	1817	5	NIC	ENSMUSG00000023707.14	novel	818	6	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	23	junction_3	31.4841229828623	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTTTGCTATTATT	NA	False	NA	NA	False	NA	NA	NA	124250379	124253543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_124250530_124250851_124251395_124251491_124251592_124252450_124252709_124252777
tx.24425	chr5	-	9208	22	NNC	ENSMUSG00000038126.18	novel	5008	23	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1	junction_13	11.6065506564435	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTCGTGGTATCTGTG	NA	False	NA	NA	False	NA	NA	NA	124465933	124389024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436751_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
tx.24426	chr5	-	5692	32	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-5	1370	combination_of_known_junctions	FALSE	canonical	3	34	junction_29	112.134674493331	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	124563661	124511224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563509
tx.24427	chr5	-	5593	31	Fusion	ENSMUSG00000038095.16_ENSMUSG00002076658.1	novel	4170	31	NA	NA	6	1370	multi-exon	FALSE	canonical	3	85	junction_29	90.1802454347218	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	124563667	124511224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
tx.24428	chr5	-	8995	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	22.2506144578077	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTTTCTACTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	125256270	125094226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
tx.24429	chr5	-	3564	21	ISM	ENSMUSG00000029478.17	ENSMUST00000111402.9	8862	48	-11	30362	-6	287	5prime_fragment	FALSE	canonical	3	10	junction_20	22.6375793758962	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTGTCACTCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	125256289	125124578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
tx.2443	chr11	-	5370	13	FSM	ENSMUSG00000020173.18	ENSMUST00000109650.8	5271	13	-99	0	-1	0	multi-exon	FALSE	canonical	3	119	junction_8	114.138895649117	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	NA	False	NA	NA	NA	12414958	12186675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
tx.24430	chr5	+	3169	3	Intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	10	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGAATGCTGTCATTTC	9031	False	NA	NA	False	NA	NA	NA	125451148	125456623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_125453533_125454603_125454786_125456020
tx.24431	chr5	+	4602	2	Intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCTGCTGAGAAGAGGA	9031	False	NA	NA	False	NA	NA	NA	125451148	125456985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_125454786_125456020
tx.24432	chr5	+	5158	9	FSM	ENSMUSG00000034324.17	ENSMUST00000119026.8	5134	9	-29	5	-29	-5	multi-exon	TRUE	canonical	0	0	junction_2	1.8328597873269	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTCAGTGTCTCGTGG	NA	False	NA	NA	False	NA	NA	NA	127318842	127642852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_127319085_127436618_127437505_127539967_127540115_127581925_127582110_127613421_127613566_127628566_127628773_127630137_127630412_127631689_127631882_127639969
tx.24434	chr5	-	5161	9	NIC	ENSMUSG00000029428.14	novel	2769	10	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	44	junction_2	6.15299723711948	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAATCGTTTGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	129085621	129061627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
tx.24435	chr5	+	6429	17	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	0	-5	intron_retention	FALSE	canonical	3	39	junction_13	23.7526314331697	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGCAGCCTGGGGCTCT	NA	False	NA	NA	False	NA	NA	NA	129578309	129648440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
tx.24436	chr5	+	6751	7	ISM	ENSMUSG00000029439.15	ENSMUST00000199925.5	5127	18	42888	5	2723	-5	3prime_fragment	FALSE	canonical	3	63	junction_3	22.9595054147272	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGCAGCCTGGGGCTCT	NA	False	NA	NA	False	NA	NA	NA	129621202	129648440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
tx.24437	chr5	+	944	4	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	-6	6	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	350.330637477734	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCTTGATTTTTCAAAA	785	False	NA	NA	False	NA	NA	NA	129792591	129795550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129792614_129792747_129792959_129793790_129793931_129794979
tx.24438	chr5	+	730	3	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	423.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	783	False	NA	NA	False	NA	NA	NA	129792589	129795545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129792614_129793790_129793931_129794979
tx.24439	chr5	-	2249	9	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-11	-12	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	4.49305018890286	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATTTAT	NA	False	NA	NA	False	NA	NA	NA	129902957	129892273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509_129902689_129902800
tx.2444	chr11	-	5626	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	-11	0	-8	0	multi-exon	FALSE	canonical	3	223	junction_7	88.5788303358848	432	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	NA	False	NA	NA	NA	12414968	12186675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
tx.24440	chr5	-	2246	7	NIC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-4	-695	intron_retention	FALSE	canonical	3	15	junction_5	2.96741563579414	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAGATAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	129902950	129892956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895867_129898301_129898368_129902056_129902112_129902509
tx.24442	chr5	-	141	2	ISM	ENSMUSG00000029673.20	ENSMUST00000160135.4	593	4	398948	0	-75	0	3prime_fragment	FALSE	canonical	3	14	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCATCTCCACTTCC	NA	False	NA	NA	False	NA	NA	NA	132079251	132059828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_132059865_132079146
tx.24443	chr5	+	1214	7	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	36.2583323756991	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGTGTGTACTGTAA	3403	False	NA	NA	False	NA	NA	NA	134961212	134970086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
tx.24446	chr5	-	7522	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	11	-7	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_31	56.8896919023566	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGAACTCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	135573958	135435395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135573790
tx.24447	chr5	-	3884	3	FSM	ENSMUSG00000039747.12	ENSMUST00000041048.6	3908	3	26	-2	26	2	multi-exon	FALSE	canonical	0	0	junction_2	1	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCTTGAGAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	136199541	136176310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_136179807_136190340_136190579_136199391
tx.24448	chr5	-	3097	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	-276	0	-34	0	multi-exon	FALSE	canonical	3	30	junction_13	19.9470373118581	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	136596378	136276988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
tx.24449	chr5	+	3019	6	NNC	ENSMUSG00000007987.13	novel	3071	5	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	28.8610464120759	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCGTCTCACTTTGAGAC	4053	False	NA	NA	False	NA	NA	NA	136937001	136944263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678_136944072_136944130
tx.2445	chr11	-	5541	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	2	-2	-1	0	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	NA	False	NA	NA	NA	12414958	12186675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
tx.24450	chr5	-	3203	3	ISM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	36	-102	1	0	intron_retention	FALSE	canonical	3	303	junction_2	3	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	NA	False	NA	NA	NA	137016361	137011047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_137011542_137011721_137011802_137013732
tx.24451	chr5	+	2820	4	NNC	ENSMUSG00000037428.15	novel	2834	5	NA	NA	-1040	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTTCCGTTATTCA	8045	False	NA	NA	False	NA	NA	NA	137054205	137062204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_137054346_137055223_137055317_137059113_137059316_137059819
tx.24452	chr5	-	3483	8	ISM	ENSMUSG00000037344.15_ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	-1315	251	-1315	-251	intron_retention	FALSE	canonical	3	95	junction_6	15.9540155523585	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTCCAAGTCTGT	212	False	NA	NA	False	NA	NA	NA	137313981	137308166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842
tx.24453	chr5	-	3922	3	ISM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	318	0	318	0	intron_retention	FALSE	canonical	3	137	junction_2	15	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCAGCACTTTCTA	3044	False	NA	NA	False	NA	NA	NA	137784607	137780167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_137780747_137780856_137780984_137781391
tx.24454	chr5	+	3764	16	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	-14	-6	intron_retention	FALSE	canonical	3	62	junction_3	14.4612893231858	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTGTGCTTTGTGT	7063	False	NA	NA	False	NA	NA	NA	137786045	137820877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
tx.24455	chr5	+	1227	9	ISM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	21	665	-8	3	intron_retention	FALSE	canonical	3	3954	junction_1	301.471288019274	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTTCCAGTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	138159353	138162243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770
tx.24456	chr5	-	2809	10	FSM	ENSMUSG00000036948.18	ENSMUST00000159649.8	2093	10	-716	0	-23	0	multi-exon	FALSE	canonical	3	30	junction_4	5.95248677154617	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTCTGTGTGTT	9193	False	NA	NA	False	NA	NA	NA	138262318	138257919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328
tx.24457	chr5	-	4012	3	ISM	ENSMUSG00000058291.15	ENSMUST00000063262.11	2254	6	5489	-7	5402	3	3prime_fragment	FALSE	canonical	3	65	junction_1	10	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTTGTTTGTTTATCA	7241	False	NA	NA	False	NA	NA	NA	138612513	138604374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_138606084_138610085_138610176_138610300
tx.24458	chr5	-	3334	17	FSM	ENSMUSG00000036718.18	ENSMUST00000044642.14	3346	17	15	-3	15	3	multi-exon	FALSE	canonical	1	5	junction_8	4.83476990145343	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTGTGTGTGTCACC	NA	False	NA	NA	False	NA	NA	NA	139722076	139692447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_139692665_139692816_139692864_139694640_139694756_139695270_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139698136_139698895_139699153_139701460_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139721772
tx.24459	chr5	-	7131	47	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_11	51.7986002759554	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	139761448	139737039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
tx.2446	chr11	+	3062	5	NIC	ENSMUSG00000048834.17	novel	3264	5	NA	NA	4	-336	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2.69258240356725	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGTATTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	16207727	16233850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_16208087_16209854_16210022_16211437_16211489_16212913_16213251_16231702
tx.24460	chr5	-	2644	18	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_17	43.2672550934514	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATTGTGTCCAAGGCTC	NA	False	NA	NA	False	NA	NA	NA	140307319	139994448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300905_140307261
tx.24461	chr5	-	4371	24	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	8.47948709081224	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTTTGGCAGGTG	4498	False	NA	NA	False	NA	NA	NA	140688046	140649259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_140651249_140651762_140651964_140654776_140654876_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
tx.24462	chr5	-	3170	11	ISM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	93	21940	9	43	5prime_fragment	FALSE	canonical	3	19	junction_4	6.58862656401165	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCGCTGGAGTTAGAC	4504	False	NA	NA	False	NA	NA	NA	140688040	140669521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
tx.24463	chr5	+	3317	14	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	23.2126776216546	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTTCTGTCTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	140690774	140705130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697263_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
tx.24464	chr5	+	3400	15	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.5197170121024	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTTCTGTCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	140690800	140705129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_140690831_140691707_140691852_140695658_140695766_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
tx.24465	chr5	+	3442	14	NNC	ENSMUSG00000000148.18	novel	3431	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	30.8270610390886	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690806	140705134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_140690984_140691707_140691852_140695892_140696048_140697263_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
tx.24466	chr5	+	4159	11	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	10	-919	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	128.758883188695	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTCCCAGAGTCAAGTG	NA	False	NA	NA	False	NA	NA	NA	142615306	142655424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_142615588_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
tx.24467	chr5	-	2301	3	ISM	ENSMUSG00000039477.17	ENSMUST00000152247.8	9342	25	60040	-56	8198	56	3prime_fragment	FALSE	canonical	3	28	junction_1	0.5	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTCTTTGGAGTGACTT	NA	False	NA	NA	False	NA	NA	NA	142714238	142710359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_142711943_142712732_142712808_142713595
tx.24468	chr5	-	2805	6	ISM	ENSMUSG00000039477.17	ENSMUST00000152247.8	9342	25	16126	30133	-6375	-5	internal_fragment	FALSE	canonical	3	20	junction_3	63.1043580111548	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACTGTGTGCCTCGTTT	NA	False	NA	NA	False	NA	NA	NA	142758152	142740548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_142741415_142745465_142745827_142748744_142748917_142750805_142750943_142751667_142751844_142757059
tx.24469	chr5	-	8464	3	ISM	ENSMUSG00000066640.12	ENSMUST00000110766.8	7857	5	7211	2	7028	-2	3prime_fragment	FALSE	canonical	3	21	junction_1	6.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCAGCCGTGTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	142873965	142852702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_142858276_142864412_142864632_142871293
tx.2447	chr11	-	436	4	FSM	ENSMUSG00000078974.11	ENSMUST00000166950.8	754	4	317	1	-1	-1	multi-exon	FALSE	canonical	3	4864	junction_3	651.205207459386	437	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTATCAAATTTTAGTA	NA	False	NA	NA	False	NA	NA	NA	16458167	16451638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458103
tx.24470	chr5	-	606	3	NNC	ENSMUSG00000104529.5	novel	520	3	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATTGTGTGTCGCCTCC	3473	False	NA	NA	False	NA	NA	NA	143151510	143150538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_143150848_143151105_143151305_143151412
tx.24471	chr5	-	3392	5	NNC	ENSMUSG00000061898.11	novel	3480	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	14.3243673507768	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTTTATGTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	143166540	143157941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165301_143166303
tx.24472	chr5	-	7308	3	FSM	ENSMUSG00000061898.11	ENSMUST00000166382.5	3238	3	-4071	1	-30	-1	multi-exon	FALSE	canonical	3	29	junction_1	4.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTGTTTATGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	143166560	143157942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_143160814_143161790_143161887_143162219
tx.24473	chr5	+	5241	4	NIC	ENSMUSG00000029587.17	novel	5265	5	NA	NA	20	0	intron_retention	FALSE	canonical	3	41	junction_1	5.43650214343336	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTTCCTTAAGC	NA	False	NA	NA	False	NA	NA	NA	143220948	143233711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_143222072_143225708_143225836_143226074_143226171_143229816
tx.24474	chr5	-	5739	2	ISM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	22	1	22	-1	intron_retention	FALSE	canonical	3	571	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTTTATTTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	143846635	143839522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_143840009_143841382
tx.24475	chr5	+	3230	15	FSM	ENSMUSG00000079109.12	ENSMUST00000170083.8	5477	15	33	2214	-2	312	multi-exon	FALSE	canonical	2	18	junction_1	27.3439916170083	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGCAGCTCTCAATCCC	NA	False	NA	NA	False	NA	NA	NA	143846814	143868572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
tx.24476	chr5	+	490	2	ISM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	576	179	576	0	3prime_fragment	FALSE	canonical	3	279	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTAGCTTGTTCTGCTC	2205	False	NA	NA	False	NA	NA	NA	144192619	144201205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_144192723_144200818
tx.24477	chr5	-	3780	13	NIC	ENSMUSG00000038859.8	novel	3247	14	NA	NA	42	0	intron_retention	FALSE	canonical	2	11	junction_12	4.25163367294137	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTGTAAGTGGTACC	NA	False	NA	NA	False	NA	NA	NA	144294880	144201335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
tx.24478	chr5	-	5200	17	NIC	ENSMUSG00000038780.15	novel	2725	18	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_9	74.3727678236463	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTTCCTCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	144902663	144813304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
tx.24479	chr5	-	5351	18	FSM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	-12	-2614	-12	-2	multi-exon	FALSE	canonical	3	98	junction_2	50.6104602342352	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTCCTTCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	144902669	144813306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
tx.2448	chr11	+	2824	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	39	-4	39	4	multi-exon	FALSE	canonical	3	579	junction_5	55.0962793662149	581	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTATTGTGTCAGCTTT	NA	False	NA	NA	False	NA	NA	NA	17109301	17150379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
tx.24480	chr5	-	4303	10	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	141	14	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	113.432309722093	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGGTTTTTAACTAT	1263	False	NA	NA	False	NA	NA	NA	146731675	146671634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146690399_146690533_146691179_146691410_146700010_146700225_146705746_146705828_146731424
tx.24481	chr5	+	1656	2	FSM	ENSMUSG00000041453.13_ENSMUSG00000077185.3	ENSMUST00000135345.2	632	2	-1025	1	-3	0	multi-exon	FALSE	canonical	3	8667	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	146770990	146772795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_146772525_146772673
tx.24482	chr5	-	1582	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	-1	3346	-1	-399	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGACCTTCACCTGA	NA	False	NA	NA	False	NA	NA	NA	146900596	146891728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
tx.24483	chr5	-	4130	10	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	3	-443	intron_retention	FALSE	canonical	3	4	junction_9	19.312888295669	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCCTTCAGCTTACAT	4963	False	NA	NA	False	NA	NA	NA	147013393	146953907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013208
tx.24484	chr5	-	2886	6	FSM	ENSMUSG00000029650.11	ENSMUST00000031655.4	2434	6	-8	-444	-8	440	multi-exon	FALSE	canonical	1	3	junction_4	0.8	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTCCCTCCTCTCGTG	NA	False	NA	NA	False	NA	NA	NA	147831633	147814806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_147816025_147816502_147816660_147821006_147821091_147822780_147823652_147830642_147830856_147831290
tx.24485	chr5	-	6142	11	FSM	ENSMUSG00000041298.16	ENSMUST00000047257.15	6157	11	13	2	-6	-2	multi-exon	FALSE	canonical	0	0	junction_7	3.86781592116274	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTTGAGATCTTTTCT	2456	False	NA	NA	False	NA	NA	NA	148865444	148808395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_148813147_148815667_148815795_148825688_148825824_148828438_148828566_148829319_148829479_148830492_148830599_148830958_148831087_148841376_148841540_148855405_148855567_148858046_148858223_148865335
tx.24486	chr5	+	4518	14	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	146.946796313311	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	149601694	149686062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_149601845_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
tx.24487	chr5	+	4366	12	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	153.306854822402	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	149601697	149686063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_149601845_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
tx.24488	chr5	+	2277	3	ISM	ENSMUSG00000041147.11	ENSMUST00000202975.4	2534	8	-6	5606	-4	-1032	intron_retention	FALSE	canonical	3	58	junction_1	9.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTTGCATGTGTTTA	366	False	NA	NA	False	NA	NA	NA	150446090	150454835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_150446362_150446639_150446745_150452934
tx.24489	chr5	-	1899	5	FSM	ENSMUSG00000041132.12	ENSMUST00000016279.11	1905	5	7	-1	7	1	multi-exon	FALSE	canonical	2	3	junction_4	1.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGGTTTTCCATTGAAT	4570	False	NA	NA	False	NA	NA	NA	150517983	150495107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_150496458_150497464_150497542_150499714_150499804_150500104_150500233_150517728
tx.2449	chr11	-	1539	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	1	4	1	-4	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	639	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGCAGTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	17161567	17153201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
tx.24490	chr5	-	1325	3	FSM	ENSMUSG00000041132.12	ENSMUST00000200840.2	1371	3	46	0	18	0	multi-exon	FALSE	canonical	3	10	junction_2	1.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATGTCTTGTCTTTCAA	4606	False	NA	NA	False	NA	NA	NA	150517947	150515216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_150516025_150516604_150516903_150517728
tx.24491	chr6	+	6666	2	FSM	ENSMUSG00000092035.9	ENSMUST00000176204.8	6667	2	1	0	1	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCCTGATCATTTCAG	-20	True	NA	NA	False	NA	NA	NA	4747306	4760517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_4747579_4754123
tx.24492	chr6	+	10182	20	NIC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	3.93858672291994	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCGGAGTCCATGTTTC	-41	True	NA	NA	False	NA	NA	NA	4902922	5165659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_4903032_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5158088_5158272_5159551
tx.24493	chr6	-	1832	9	FSM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	98	479	-27	-479	multi-exon	FALSE	canonical	2	9	junction_7	2.57087047515039	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTATTTGTTTGTTTGTT	-18	True	NA	NA	False	NA	NA	NA	5298357	5264625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277871_5277928_5289012_5289084_5298211
tx.24494	chr6	-	3105	18	FSM	ENSMUSG00000015112.16	ENSMUST00000188414.4	3121	18	17	-1	17	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	6217156	6041217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
tx.24495	chr6	+	3765	2	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	-63	-25552	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGTTTTCTCCTAG	-6	True	NA	NA	False	NA	NA	NA	7844778	7850135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_7845395_7846986
tx.24496	chr6	+	4526	3	ISM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	18989	1087	18989	-1087	3prime_fragment	FALSE	canonical	3	128	junction_1	3	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATCATTGACTAC	NA	False	NA	NA	False	NA	NA	NA	7863830	7874600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_7864142_7866375_7867044_7871053
tx.24497	chr6	+	3131	8	NIC	ENSMUSG00000029638.18	novel	6200	8	NA	NA	-208	197	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2.9623487647611	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCCATTGGGGTCATA	-21	True	NA	NA	False	NA	NA	NA	8509391	8594268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_8510320_8537816_8537969_8558499_8558587_8573181_8573299_8579586_8579740_8582579_8582791_8591544_8591666_8592906
tx.24498	chr6	+	6396	8	FSM	ENSMUSG00000029638.18	ENSMUST00000064285.15	6200	8	-206	10	-206	-10	multi-exon	FALSE	canonical	0	0	junction_4	3.04389653609465	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGGAATAGTTTACAT	-19	True	NA	NA	False	NA	NA	NA	8509393	8597538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_8510320_8537816_8537969_8558499_8558587_8573184_8573299_8579586_8579740_8582579_8582791_8591544_8591666_8592906
tx.24499	chr6	-	1718	3	ISM	ENSMUSG00000029632.8	ENSMUST00000031637.8	468	4	-6	-1	-6	0	intron_retention	FALSE	canonical	3	8511	junction_2	467.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	-4	True	NA	NA	False	NA	NA	NA	11907455	11900370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_11900591_11905200_11905262_11906018
tx.245	chr1	+	3829	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-2	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	38.3661202582887	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACATAAAAGTACATCT	NA	False	NA	NA	False	NA	NA	NA	44187066	44220399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_44187311_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
tx.2450	chr11	+	2023	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	-15	-6	-15	6	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	342	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGCGTTGATTCTTT	2456	False	NA	NA	False	NA	NA	NA	17161902	17183802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
tx.24500	chr6	+	3690	4	FSM	ENSMUSG00000041390.19	ENSMUST00000125326.8	3635	4	-28	-27	-10	27	multi-exon	FALSE	canonical	3	76	junction_1	31.8433666561813	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGGAAGAAAAAGAAAAT	-9	True	NA	NA	False	NA	NA	NA	15720691	15773330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212
tx.24501	chr6	-	5549	5	NIC	ENSMUSG00000039841.15	novel	2699	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	13	junction_4	15.3948043183407	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTATCTTTTTGTGCA	-7	True	NA	NA	False	NA	NA	NA	28261932	28239926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261478
tx.24502	chr6	-	4316	6	FSM	ENSMUSG00000039841.15	ENSMUST00000115320.8	4311	6	-11	6	1	-6	multi-exon	FALSE	canonical	2	3	junction_5	17.2232401132888	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAAGGTGTTATCTTTTT	4	True	NA	NA	False	NA	NA	NA	28261921	28239931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261376
tx.24503	chr6	+	1662	5	NIC	ENSMUSG00000020440.14	novel	1116	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1725	junction_3	155.809779859931	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	-43	True	NA	NA	False	NA	NA	NA	28423546	28426601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
tx.24504	chr6	-	3656	5	NNC	ENSMUSG00000079654.4	novel	3411	5	NA	NA	194	5	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	5.1234753829798	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGACCTTCTTGGAAA	264	False	NA	NA	False	NA	NA	NA	29179389	29169225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29179021
tx.24505	chr6	-	3019	6	NNC	ENSMUSG00000079654.4	novel	3411	5	NA	NA	39	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	5.46260011349906	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTCTGACCTTCTTGG	109	False	NA	NA	False	NA	NA	NA	29179544	29169228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177322_29177676_29177831_29179455
tx.24506	chr6	-	3515	5	FSM	ENSMUSG00000079654.4	ENSMUST00000159200.2	3411	5	-103	-1	-103	1	multi-exon	FALSE	canonical	3	12	junction_2	1.4790199457749	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTTCTGACCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	29179686	29169229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29179455
tx.24507	chr6	-	4914	38	FSM	ENSMUSG00000059022.16	ENSMUST00000101614.10	4885	38	-28	-1	-26	0	multi-exon	TRUE	canonical	0	0	junction_5	1.92367131343505	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGTATGTGTACTTC	8	False	NA	NA	False	NA	NA	NA	29507977	29482034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_29482462_29482632_29482940_29483928_29484094_29484613_29484716_29484809_29484922_29485001_29485175_29485416_29485560_29487179_29487280_29487495_29487576_29489031_29489153_29490064_29490148_29490393_29490568_29491663_29491758_29491843_29491927_29492053_29492145_29492383_29492470_29493187_29493365_29495756_29495928_29496159_29496349_29496429_29496524_29496618_29496702_29496800_29496975_29497551_29497646_29497720_29497828_29497903_29498057_29498275_29498358_29498427_29498514_29498785_29498880_29498955_29499036_29499123_29499218_29501200_29501290_29502288_29502383_29502583_29502667_29502776_29502874_29504231_29504309_29504397_29504567_29505636_29505801_29507855
tx.24508	chr6	+	4619	18	FSM	ENSMUSG00000039629.15	ENSMUST00000137068.6	3098	18	2	-1523	2	1	multi-exon	FALSE	canonical	3	10	junction_1	4.07116622894077	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAACGTTGTTTATATT	-3	True	NA	NA	False	NA	NA	NA	29917013	29947076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424
tx.24509	chr6	+	1354	10	FSM	ENSMUSG00000029762.7	ENSMUST00000038406.7	1358	10	-6	10	-6	-10	multi-exon	FALSE	canonical	2	5	junction_2	1.94999208608714	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAACACGTTCTGAAGT	NA	False	NA	NA	False	NA	NA	NA	34331047	34345388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
tx.2451	chr11	+	1058	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-19	1942	-4	610	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTTGTATGTCCTGACT	7312	False	NA	NA	False	NA	NA	NA	17207574	17217234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
tx.24510	chr6	-	3678	9	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	14616	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	28.1768965643841	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5160	False	NA	NA	False	NA	NA	NA	34872882	34857360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34870776
tx.24511	chr6	-	3800	14	ISM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	38	0	-2	0	intron_retention	FALSE	canonical	2	55	junction_12	11.881067431574	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5814	False	NA	NA	False	NA	NA	NA	34887773	34857360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295
tx.24512	chr6	-	2740	12	FSM	ENSMUSG00000029847.14	ENSMUST00000201355.4	2003	12	-99	-638	-99	-19	multi-exon	FALSE	canonical	2	5	junction_7	2.56808125305919	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	34965438	34922231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_34923272_34925142_34925239_34925332_34925442_34925739_34925905_34930699_34930954_34931904_34932062_34932804_34932926_34933811_34933994_34936389_34936550_34953960_34954119_34955843_34955991_34965287
tx.24513	chr6	-	3291	2	ISM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	107639	-6	-1186	0	3prime_fragment	FALSE	canonical	3	97	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	35002985	34998999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_35000368_35001062
tx.24514	chr6	-	3267	11	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	66.6156888427944	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	7647	False	NA	NA	False	NA	NA	NA	35110658	34998999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35029839_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
tx.24515	chr6	-	5386	2	ISM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	107639	5	2028	-5	3prime_fragment	FALSE	canonical	3	94	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATGTTGCCTGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	37311442	37304194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_37309436_37311297
tx.24516	chr6	-	5094	11	NIC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-17	3170	intron_retention	FALSE	canonical	3	82	junction_9	9.78825827203185	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	NA	False	NA	NA	False	NA	NA	NA	37419098	37308056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
tx.24517	chr6	+	4007	2	Intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	37421287	37425499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_+_37423146_37423350
tx.24518	chr6	-	4520	15	NNC	ENSMUSG00000038600.13	novel	666	5	NA	NA	151	-12598	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.45894286080093	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATTTGTATTGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	38073969	38040813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_38043558_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
tx.24519	chr6	+	5219	10	ISM	ENSMUSG00000029823.17	ENSMUST00000161227.8	2405	11	-345	2215	-7	845	5prime_fragment	FALSE	canonical	2	8	junction_2	39.0924829375447	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTCTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	38528392	38584147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_38528844_38531914_38531999_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
tx.2452	chr11	+	4102	4	ISM	ENSMUSG00000000581.9	ENSMUST00000156784.2	684	5	1828	-606	1828	606	3prime_fragment	FALSE	canonical	3	609	junction_2	43.977266854592	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACGGTTGTATGTCCT	9253	False	NA	NA	False	NA	NA	NA	17209515	17217230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_17212795_17213608_17213676_17213950_17214007_17216530
tx.24520	chr6	+	2692	9	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_8	38.4640660227179	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTACCTAGTAGTTAACA	NA	False	NA	NA	False	NA	NA	NA	38528376	38586402	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211_38580404_38585087
tx.24521	chr6	+	2664	10	FSM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-11	49	-11	-6	multi-exon	FALSE	canonical	3	38	junction_9	33.3603594142346	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACTGAAACAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	38528388	38586356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
tx.24522	chr6	-	4285	14	ISM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	56723	-657	-853	653	3prime_fragment	FALSE	canonical	2	8	junction_4	5.05941035458626	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGTAATTGCACAAAGT	NA	False	NA	NA	False	NA	NA	NA	38796134	38674161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
tx.24523	chr6	-	4217	21	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	0	-5391	combination_of_known_junctions	FALSE	canonical	1	3	junction_11	11.5147731197797	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTCAAATTATAATTG	6441	False	NA	NA	False	NA	NA	NA	39702397	39585561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39625754_39625791_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
tx.24524	chr6	-	3440	18	FSM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	-164	-3	-164	3	multi-exon	FALSE	canonical	0	0	junction_2	1.13454714835211	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCCCTTGATGTTTTT	8026	False	NA	NA	False	NA	NA	NA	42350366	42335417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_42335781_42335869_42336026_42337478_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709_42343113_42344519_42344802_42349108_42349177_42350059
tx.24525	chr6	-	5250	9	FSM	ENSMUSG00000036667.15	ENSMUST00000045054.11	5257	9	5	2	5	-2	multi-exon	FALSE	canonical	1	2	junction_8	3.27633560552029	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCAGAGGCTTCACATT	6078	False	NA	NA	False	NA	NA	NA	42687017	42644937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42686892
tx.24526	chr6	-	4624	7	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	-23	952	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	45.192182214774	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGCTAGGTGCCACTT	1074	False	NA	NA	False	NA	NA	NA	48063503	48038376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060154_48060239_48060540_48063248
tx.24527	chr6	+	3846	2	NNC	ENSMUSG00000052751.17	novel	989	2	NA	NA	15	-2	intron_retention	FALSE	canonical	3	26	junction_1	0	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGCTGGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	48570848	48576013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_48571911_48573229
tx.24528	chr6	-	2122	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	181.788983095786	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4578	False	NA	NA	False	NA	NA	NA	49240979	49220854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229741_49230043_49240771
tx.24529	chr6	-	6701	24	NNC	ENSMUSG00000029822.16	novel	4039	22	NA	NA	25536	3	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_23	4.25154258672422	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTGTCTTTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	50407605	50270306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50407538
tx.2453	chr11	-	3054	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	-2	1133	-2	-1133	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTTGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	17903877	17889888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
tx.24530	chr6	+	3066	3	FSM	ENSMUSG00000029832.17	ENSMUST00000160133.2	1125	3	-48	-1893	31	1	multi-exon	FALSE	canonical	3	21	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAAAAATATTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	51409680	51435749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_51410394_51427946_51428124_51433573
tx.24531	chr6	+	2085	3	FSM	ENSMUSG00000085412.8	ENSMUST00000125374.8	391	3	3	-1697	3	541	multi-exon	FALSE	canonical	3	144	junction_2	38	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTTATGTGAATGAA	781	False	NA	NA	False	NA	NA	NA	52079931	52091205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_52080017_52083750_52083877_52089331
tx.24532	chr6	-	2587	3	FSM	ENSMUSG00000029844.10	ENSMUST00000120363.2	2043	3	-533	-11	-533	6	multi-exon	FALSE	canonical	2	5	junction_2	5.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCTTGTGTATTTGGC	NA	False	NA	NA	False	NA	NA	NA	52135830	52132563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_52134070_52134546_52134642_52134844
tx.24533	chr6	-	2046	2	FSM	ENSMUSG00000038227.16	ENSMUST00000048680.8	3226	2	1183	-3	2	3	multi-exon	FALSE	canonical	3	9	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTGCGGCTCTGCTCTT	9735	False	NA	NA	False	NA	NA	NA	52203167	52200076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_52201463_52202507
tx.24534	chr6	-	3213	2	FSM	ENSMUSG00000102373.2_ENSMUSG00000038203.22	ENSMUST00000147595.7	2400	2	-61	-752	-61	-724	multi-exon	FALSE	canonical	2	3	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCAGTGTTTGTGTGCTT	7962	False	NA	NA	False	NA	NA	NA	52237849	52233921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_52236129_52236843
tx.24535	chr6	+	2929	3	FSM	ENSMUSG00000005503.9	ENSMUST00000031787.8	2877	3	-53	1	-53	-1	multi-exon	FALSE	canonical	1	2	junction_1	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGCATAAGTTTTGTT	5398	False	NA	NA	False	NA	NA	NA	52290429	52295362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_52291257_52292722_52292980_52293517
tx.24536	chr6	+	2838	7	FSM	ENSMUSG00000004633.18	ENSMUST00000114403.8	1274	7	-70	-1494	-70	1494	multi-exon	FALSE	canonical	0	0	junction_6	7.55902698029904	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTCTGTATTAACTGGATA	NA	False	NA	NA	False	NA	NA	NA	54016953	54201029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54198905
tx.24537	chr6	+	6752	16	NIC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	-26	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	26.2039861259483	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGGCTATTGATCTC	NA	False	NA	NA	False	NA	NA	NA	56691857	56738894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707697_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
tx.24538	chr6	+	5682	18	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-86	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	68.0509172284999	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACAGTCTGTTGTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	58572873	58672657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_58573003_58573959_58574094_58612502_58612647_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
tx.24539	chr6	-	1147	6	FSM	ENSMUSG00000025889.14	ENSMUST00000114268.5	1280	6	137	-4	5	0	multi-exon	FALSE	canonical	2	14	junction_1	4.2614551505325	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGGTTCCTTTTAC	7711	False	NA	NA	False	NA	NA	NA	60805851	60708558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60795307_60795350_60804464_60804612_60805707
tx.2454	chr11	+	1432	2	NNC	ENSMUSG00000045671.18	novel	2852	6	NA	NA	-14	-72102	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCATTTCGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	19874427	19896031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_19874957_19895128
tx.24540	chr6	+	4459	4	FSM	ENSMUSG00000036402.14	ENSMUST00000204862.2	380	4	-348	-3731	-6	-52	multi-exon	FALSE	canonical	2	28	junction_1	141.313677878525	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCATTGACTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	66873526	66998282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_66873974_66891436_66891495_66992708_66992828_66994447
tx.24541	chr6	-	1314	3	NIC	ENSMUSG00000036390.9	novel	1223	4	NA	NA	2	-1	intron_retention	FALSE	canonical	3	118	junction_1	4	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTCTCAACGTGTGG	NA	False	NA	NA	False	NA	NA	NA	67014388	67012080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_67012757_67013661_67014096_67014184
tx.24542	chr6	+	1737	7	NIC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	3728	junction_3	1002.47367657322	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCACTTCATTTGTGTT	5866	False	NA	NA	False	NA	NA	NA	67243988	67261298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_67244394_67248181_67248333_67248870_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
tx.24543	chr6	-	1206	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	12	522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	269.009293519759	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGCATGTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	81942927	81938432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_81938566_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
tx.24544	chr6	-	2192	2	ISM	ENSMUSG00000030042.16	ENSMUST00000141138.8	890	4	-352	-35	-2	35	intron_retention	FALSE	canonical	3	893	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTTGCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	82629853	82624261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_82625018_82628417
tx.24545	chr6	-	2737	2	ISM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-845	-268	-845	1	intron_retention	FALSE	canonical	3	90	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTCCAGTTGTCT	6331	False	NA	NA	False	NA	NA	NA	83048119	83045303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_83045956_83046034
tx.24546	chr6	-	1706	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	-191	-1	-123	1	multi-exon	FALSE	canonical	3	96	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTCCAGTTGTCT	7053	False	NA	NA	False	NA	NA	NA	83047397	83045303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83046273_83046660
tx.24547	chr6	-	1795	3	NNC	ENSMUSG00000068327.6	novel	1236	3	NA	NA	-396	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	44.5	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGTCTCCAGTTGTC	6780	False	NA	NA	False	NA	NA	NA	83047670	83045304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_83045956_83046034_83046169_83046660
tx.24548	chr6	+	2161	12	FSM	ENSMUSG00000034930.17	ENSMUST00000065512.11	2191	12	29	1	29	-1	multi-exon	FALSE	canonical	3	13	junction_1	17.934223251548	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTCTTTCACTTGTCT	3558	False	NA	NA	False	NA	NA	NA	83112821	83129559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83113041_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
tx.24549	chr6	-	1195	11	FSM	ENSMUSG00000030032.15	ENSMUST00000125894.9	1216	11	19	2	1	-2	multi-exon	FALSE	canonical	1	8	junction_10	9.65453261426984	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTGAGCACTC	9901	False	NA	NA	False	NA	NA	NA	83133360	83129692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156_83133228_83133296
tx.2455	chr11	+	4562	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-262	-1448	-195	-1	multi-exon	TRUE	canonical	3	51	junction_2	8.95767827062348	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	NA	False	NA	NA	False	NA	NA	NA	19874179	19974025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
tx.24550	chr6	+	2248	3	FSM	ENSMUSG00000045160.15	ENSMUST00000055875.14	709	3	-1555	16	-6	4	multi-exon	FALSE	canonical	3	998	junction_1	19	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCATGCTTCAGGTGCC	388	False	NA	NA	False	NA	NA	NA	83326466	83335382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_83328372_83330023_83330113_83335128
tx.24551	chr6	-	3535	5	ISM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	2	3	2	-3	intron_retention	FALSE	canonical	3	526	junction_1	53.5397048927242	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGCTGTAGTGTGTG	9714	False	NA	NA	False	NA	NA	NA	83752793	83745869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999
tx.24552	chr6	+	1305	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	77.5253045108897	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9459	False	NA	NA	False	NA	NA	NA	83772164	83779538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_83772265_83773888_83774075_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
tx.24553	chr6	-	3378	4	NNC	ENSMUSG00000068299.12	novel	3019	4	NA	NA	-21	0	intron_retention	FALSE	canonical	1	1	junction_3	6.84754619472471	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGGGTGGATCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	85881887	85876032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_85878596_85878934_85879080_85879173_85879312_85881355
tx.24554	chr6	-	1016	2	FSM	ENSMUSG00000057103.12	ENSMUST00000161198.4	1021	2	4	1	4	-1	multi-exon	FALSE	canonical	3	9	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAATGCATGTGATGGC	9868	False	NA	NA	False	NA	NA	NA	85892665	85887136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_85888003_85892515
tx.24555	chr6	+	3842	14	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	1	-450	intron_retention	FALSE	canonical	3	32	junction_7	51.8881363919042	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTATGTTTTATATGA	9754	False	NA	NA	False	NA	NA	NA	86381273	86409759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
tx.24556	chr6	+	1306	5	NNC	ENSMUSG00000097048.8	novel	594	5	NA	NA	-167	-1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	37.6231311828242	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTGTATTTTTAAATT	NA	False	NA	NA	False	NA	NA	NA	86503624	86541429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_86504416_86504872_86504957_86509136_86509290_86540413_86540520_86541257
tx.24557	chr6	+	5245	18	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-68	673	combination_of_known_splicesites	FALSE	canonical	2	7	junction_16	9.86903865001209	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTGGTCAGTTGTC	NA	False	NA	NA	False	NA	NA	NA	86826430	86975277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86972821
tx.24558	chr6	+	10035	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-29	3	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	8.0156097709407	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGTTGTGTGTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	86826469	86980208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
tx.24559	chr6	+	6425	20	NNC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	36.0559737213853	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9929	False	NA	NA	False	NA	NA	NA	87019811	87069179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_87019988_87027023_87027195_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
tx.2456	chr11	-	3631	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	-2	2	-2	-2	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	1254	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAATTTTGTCTTTTT	1334	False	NA	NA	False	NA	NA	NA	20062915	20012305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
tx.24560	chr6	-	2312	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	1	-13169	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	202.243664919324	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTATGAGTGCTTTATC	NA	False	NA	NA	False	NA	NA	NA	88423495	88288256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_88289791_88332464_88332630_88335527_88335625_88353185_88353394_88423187
tx.24561	chr6	+	2253	11	FSM	ENSMUSG00000030089.16	ENSMUST00000044019.16	2412	11	157	2	157	-2	multi-exon	FALSE	canonical	3	6	junction_2	19.246038553427	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGGTGTCCTCCATCCT	NA	False	NA	NA	False	NA	NA	NA	90581863	90623392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
tx.24562	chr6	+	2310	2	ISM	ENSMUSG00000030089.16	ENSMUST00000032177.10	2324	10	23619	2	23619	-2	3prime_fragment	FALSE	canonical	3	45	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGGTGTCCTCCATCCT	374	False	NA	NA	False	NA	NA	NA	90619747	90623392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_90621216_90622550
tx.24563	chr6	-	5508	12	ISM	ENSMUSG00000034312.16	ENSMUST00000101151.10	6490	14	119631	0	4204	0	3prime_fragment	FALSE	canonical	3	28	junction_1	6.45902533393877	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATTGTCCCCAGCCGCC	3008	False	NA	NA	False	NA	NA	NA	90667474	90636579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561
tx.24564	chr6	-	5703	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	11	641	intron_retention	FALSE	canonical	2	9	junction_13	9.75195322568645	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTCTCTCTGAGCTAG	NA	False	NA	NA	False	NA	NA	NA	90693500	90637321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
tx.24565	chr6	-	6173	16	NIC	ENSMUSG00000034312.16	novel	3500	16	NA	NA	-124	619	intron_retention	FALSE	canonical	0	0	junction_15	15.5626333104509	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATATGCCGGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	90965791	90637343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90764099_90764145_90850421_90850452_90965063
tx.24566	chr6	-	10460	12	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-103	601	intron_retention	FALSE	canonical	3	17	junction_11	8.08835506164917	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGGAGTGGTAACATTA	2744	False	NA	NA	False	NA	NA	NA	90713772	90637361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
tx.24567	chr6	+	472	2	FSM	ENSMUSG00000100680.2	ENSMUST00000186472.2	486	2	13	1	13	-1	multi-exon	FALSE	canonical	2	7	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTCTACACTCATTT	NA	False	NA	NA	False	NA	NA	NA	91417981	91418736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91418141_91418423
tx.24568	chr6	-	5292	24	NNC	ENSMUSG00000030098.16	novel	5206	24	NA	NA	-16655	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.38312814961625	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTAGCCTCTCAACT	NA	False	NA	NA	False	NA	NA	NA	91820886	91738434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_91740588_91741676_91741824_91742228_91742373_91749613_91749720_91750773_91750943_91751662_91751843_91752325_91752466_91754345_91754491_91755579_91755726_91755815_91755883_91756115_91756197_91756804_91756951_91757311_91757499_91759296_91759441_91759763_91759887_91760550_91760721_91760804_91760953_91761665_91761812_91762661_91762738_91763447_91763535_91764164_91764311_91764988_91765125_91765344_91765426_91820662
tx.24569	chr6	+	2198	3	FSM	ENSMUSG00000034083.17	ENSMUST00000138868.8	3980	3	6	1776	6	-1776	multi-exon	FALSE	canonical	3	200	junction_1	5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTCTAATACCTGTCT	NA	False	NA	NA	False	NA	NA	NA	91855039	91860192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91855168_91857237_91857343_91858227
tx.2457	chr11	+	2830	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	2111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	NA	NA	NA	20151428	20176856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
tx.24570	chr6	+	7694	16	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	15.9368197022562	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	NA	False	NA	NA	NA	92068396	92150037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92129910_92129985_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
tx.24571	chr6	-	5064	12	NIC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-20	-8	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	36.6012690020713	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGACTTGTGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	92191850	92163700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_92167234_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
tx.24572	chr6	-	5751	22	NIC	ENSMUSG00000045095.17	novel	7209	24	NA	NA	-29632	-1063	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	8.40823481465716	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTAGTTTGTTGGGGCT	NA	False	NA	NA	False	NA	NA	NA	93920303	93653498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671157_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
tx.24573	chr6	-	5716	23	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	-29632	-1215	combination_of_known_junctions	FALSE	canonical	3	7	junction_10	9.93376827121087	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAGAATTTATGACAG	NA	False	NA	NA	False	NA	NA	NA	93920303	93653650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671190_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
tx.24574	chr6	-	5716	23	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	-29632	-1218	combination_of_known_junctions	FALSE	canonical	3	7	junction_10	9.93376827121087	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAAGAGAATTTATGA	NA	False	NA	NA	False	NA	NA	NA	93920303	93653653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
tx.24575	chr6	-	1685	4	ISM	ENSMUSG00000045095.17	ENSMUST00000203519.3	3920	21	340573	101397	-29632	895	internal_fragment	FALSE	canonical	3	29	junction_3	7.11805216802087	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGCACAGTGGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	93920303	93761388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_93762628_93769327_93769535_93792686_93792807_93920184
tx.24576	chr6	-	4621	17	ISM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	376	0	54	0	3prime_fragment	FALSE	canonical	3	33	junction_9	6.26716393195519	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGAACATCTTCAGGAT	NA	False	NA	NA	False	NA	NA	NA	97125767	97086984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837
tx.24577	chr6	+	4910	10	FSM	ENSMUSG00000035158.16	ENSMUST00000203884.3	2113	10	-40	-2757	-40	1	multi-exon	FALSE	canonical	3	14	junction_1	21.9516865686871	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTGACCAGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	97783972	97998311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_97784249_97918013_97918264_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
tx.24579	chr6	-	3445	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	-6	-1367	3	1367	multi-exon	FALSE	canonical	3	47	junction_10	56.1066840937869	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGACTTTGTTAAATTC	NA	False	NA	NA	False	NA	NA	NA	106777032	106755794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
tx.2458	chr11	-	5419	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	3	-618	3	618	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATTCCCATCTAGCGTT	3058	False	NA	NA	False	NA	NA	NA	20199415	20176418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
tx.24580	chr6	-	761	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9166	115	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	14.0779082253011	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTCTTGTGTCAGTA	NA	False	NA	NA	False	NA	NA	NA	108600122	108587178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_108587583_108589268_108589374_108590092_108590176_108590909_108590955_108599998
tx.24581	chr6	-	1164	2	FSM	ENSMUSG00000086429.10	ENSMUST00000124246.4	1181	2	14	3	-5	-3	multi-exon	FALSE	canonical	2	7	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGGAATGACTTTTT	NA	False	NA	NA	False	NA	NA	NA	113054157	113047361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113048397_113054028
tx.24582	chr6	-	178	2	Intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAATTAAAACAAGACTAC	NA	False	NA	NA	False	NA	NA	NA	113328061	113309792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_-_113309921_113328011
tx.24583	chr6	-	3716	4	NIC	ENSMUSG00000045009.10	novel	3741	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	2.16024689946929	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTGTATGAATGTT	4276	False	NA	NA	False	NA	NA	NA	113478901	113470599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_113473027_113473892_113474046_113474232_113475278_113478810
tx.24584	chr6	+	2429	7	ISM	ENSMUSG00000060477.15	ENSMUST00000113024.3	1887	10	5755	-1226	5755	-2	3prime_fragment	FALSE	canonical	3	13	junction_2	4.74926894959167	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTCTGGGTGAAT	1891	False	NA	NA	False	NA	NA	NA	113652493	113671985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
tx.24586	chr6	+	3679	13	ISM	ENSMUSG00000030310.11	ENSMUST00000032454.8	4302	16	19864	7	636	-7	3prime_fragment	FALSE	canonical	3	73	junction_2	10.9010702838452	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTATTGGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	114279459	114294486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
tx.24587	chr6	+	2312	2	ISM	ENSMUSG00000030310.11	ENSMUST00000204540.2	722	3	1084	-1919	1084	-6	3prime_fragment	FALSE	canonical	3	109	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTATTGGTTACTTTC	8546	False	NA	NA	False	NA	NA	NA	114291333	114294487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_114291424_114292265
tx.24588	chr6	-	3143	3	ISM	ENSMUSG00000030316.14	ENSMUST00000112975.2	1207	4	7	4852	7	1705	5prime_fragment	FALSE	canonical	3	439	junction_1	5.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGATGATGATATGTGA	NA	False	NA	NA	False	NA	NA	NA	115014830	115006533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_115009274_115011911_115012095_115014610
tx.24589	chr6	+	3832	11	FSM	ENSMUSG00000009394.14	ENSMUST00000203450.2	3806	11	-23	-3	10	3	multi-exon	FALSE	canonical	0	0	junction_1	2.42693221990232	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTAAGTTGTAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	115111887	115253523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_115112422_115212974_115213033_115214215_115214308_115216319_115216477_115221106_115221197_115231123_115231187_115231550_115231694_115238615_115238691_115239482_115239586_115240792_115240943_115251156
tx.2459	chr11	-	6452	2	ISM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	17755	-2767	17720	2767	3prime_fragment	FALSE	canonical	3	68	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCGTCAATGATAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	20181663	20174269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_20179482_20180423
tx.24590	chr6	+	4889	11	ISM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	10585	4	10585	-4	3prime_fragment	FALSE	canonical	3	54	junction_7	11.6056020955399	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTACTCATTTTCTTC	2354	False	NA	NA	False	NA	NA	NA	115762083	115782514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
tx.24591	chr6	-	2580	9	NNC	ENSMUSG00000030123.16	novel	6907	36	NA	NA	124	-8516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCCATGGCTCTGTTCC	NA	False	NA	NA	False	NA	NA	NA	115971842	115952439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_115952697_115952911_115953015_115953330_115953440_115953530_115953709_115954903_115955034_115955118_115955220_115955439_115955572_115957538_115957716_115970449
tx.24592	chr6	-	4119	19	FSM	ENSMUSG00000030110.14	ENSMUST00000088790.9	4497	19	343	35	-242	-35	multi-exon	FALSE	canonical	0	0	junction_9	1.69603750249708	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTTGTCTTGGATTA	NA	False	NA	NA	False	NA	NA	NA	118174336	118131561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152810_118153138_118153398_118155425_118155629_118156232_118156429_118157178_118157424_118158785_118159074_118161137_118161402_118174021
tx.24593	chr6	-	3384	6	NNC	ENSMUSG00000030145.15	novel	3683	6	NA	NA	8	-88	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	7.80768851837725	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTCGAGTTGTCAATG	NA	False	NA	NA	False	NA	NA	NA	118432451	118404367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430849_118431637_118431700_118432376
tx.24594	chr6	-	2952	2	ISM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	31295	-612	31295	-3	3prime_fragment	FALSE	canonical	3	98	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTGTTGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	119334352	119330113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_119332890_119334176
tx.24595	chr6	-	3138	4	ISM	ENSMUSG00000045962.17	ENSMUST00000088646.12	8364	26	101253	-650	43	0	3prime_fragment	FALSE	canonical	3	16	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGGTTGTTCTTTCT	8246	False	NA	NA	False	NA	NA	NA	119913367	119900931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329
tx.24596	chr6	-	3985	6	ISM	ENSMUSG00000041372.11	ENSMUST00000125341.2	3610	20	32234	-2313	32234	2313	3prime_fragment	FALSE	canonical	3	55	junction_5	8.45221864364617	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTAATGTGTTTCA	1105	False	NA	NA	False	NA	NA	NA	120187370	120177720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052
tx.24597	chr6	-	4596	7	ISM	ENSMUSG00000041372.11	ENSMUST00000125341.2	3610	20	27285	-2313	27285	2313	3prime_fragment	FALSE	canonical	3	55	junction_5	7.83156008298049	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTAATGTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	120192319	120177720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707
tx.24598	chr6	+	2969	16	ISM	ENSMUSG00000030180.16	ENSMUST00000135802.8	3665	21	-2	13287	-2	-7646	5prime_fragment	FALSE	canonical	3	38	junction_13	8.04708366773675	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTGCCTCAGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	120341082	120383147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820
tx.24599	chr6	+	7134	20	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	3	-1560	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	36.1989730651234	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACACAAATGTCCCAAT	NA	False	NA	NA	False	NA	NA	NA	120643332	120746591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120734923_120735486_120735593_120738104_120739519_120742232_120742345_120743372
tx.246	chr1	+	2978	11	FSM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	156	4	-26	-4	multi-exon	FALSE	canonical	3	15	junction_7	3.104834939252	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGTATGATATGCTCA	NA	False	NA	NA	False	NA	NA	NA	44590826	44835994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
tx.2460	chr11	-	2179	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	-8	0	3	0	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3047	False	NA	NA	False	NA	NA	NA	20199426	20188385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
tx.24600	chr6	+	6845	6	NIC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	77.7061130156438	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGACTCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	120813167	120869800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_120813319_120825416_120825578_120842528_120842686_120847726_120847797_120853163_120853308_120863638
tx.24601	chr6	-	4431	8	FSM	ENSMUSG00000051586.18	ENSMUST00000151602.4	992	8	-380	-3059	-380	0	multi-exon	FALSE	canonical	3	23	junction_5	3.15581743348207	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAATGAAAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	120935976	120908682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201
tx.24602	chr6	-	7123	19	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-69	4	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	14.3922132581871	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTGAGTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	121087123	120974272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
tx.24603	chr6	-	3016	19	NNC	ENSMUSG00000051586.18	novel	2953	19	NA	NA	-60	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	24.7262169057285	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCCTTTAGTGTGATTG	NA	False	NA	NA	False	NA	NA	NA	121087114	120984194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121084624_121084804_121086976
tx.24604	chr6	+	1827	5	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	4568	32	4289	-32	3prime_fragment	FALSE	canonical	3	1209	junction_3	59.8430238206593	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	7232	False	NA	NA	False	NA	NA	NA	122290246	122294607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
tx.24605	chr6	-	4859	7	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-44	382	intron_retention	FALSE	canonical	1	1	junction_6	65.5159013777063	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAGAAAATACTTTCCT	9196	False	NA	NA	False	NA	NA	NA	122463508	122429677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049_122463123_122463414
tx.24606	chr6	-	2884	12	FSM	ENSMUSG00000038521.18	ENSMUST00000162443.8	2906	12	25	-3	-13	0	multi-exon	FALSE	canonical	1	3	junction_4	4.09797369803078	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTCTGCTTTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	124519293	124507303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319_124514446_124517279_124517458_124517747_124517956_124518291_124518448_124519226
tx.24607	chr6	-	2293	4	ISM	ENSMUSG00000038390.12	ENSMUST00000046893.10	2676	5	1931	0	1726	0	3prime_fragment	FALSE	canonical	2	6	junction_2	2.62466929133727	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGTTCAGCGTTTGC	1249	False	NA	NA	False	NA	NA	NA	124838949	124835406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_124836184_124836454_124836613_124836985_124837176_124837781
tx.24608	chr6	+	2867	9	NIC	ENSMUSG00000038271.18	novel	2283	10	NA	NA	-26	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	12.7616368464237	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8201	False	NA	NA	False	NA	NA	NA	125122177	125138743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
tx.24609	chr6	+	1703	5	FSM	ENSMUSG00000030341.18	ENSMUST00000134803.2	764	5	-330	-609	-330	-1	multi-exon	FALSE	canonical	3	27	junction_3	5.67340285895511	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTGACCCTGGAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	125337059	125339446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
tx.2461	chr11	-	2784	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	5	-1	5	0	multi-exon	FALSE	canonical	3	111	junction_1	11	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3049	False	NA	NA	False	NA	NA	NA	20199424	20188385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_20190699_20191885_20192239_20199306
tx.24610	chr6	+	7791	46	ISM	ENSMUSG00000001930.18	ENSMUST00000112254.8	8834	52	35600	3	-15002	-3	3prime_fragment	TRUE	canonical	2	5	junction_37	5.89018853583265	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGGTTGTGGACTGT	NA	False	NA	NA	False	NA	NA	NA	125565510	125663639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_125565597_125567141_125567265_125568112_125568225_125568596_125568644_125575444_125575582_125576214_125576354_125577592_125577694_125580286_125580483_125581092_125581309_125585064_125585306_125590997_125591093_125592922_125593084_125601501_125601606_125603197_125603337_125605303_125605439_125608059_125608207_125612517_125612659_125612830_125612945_125614342_125614500_125614929_125615089_125616225_125616362_125618997_125620377_125622599_125622717_125622804_125622946_125623215_125623360_125624707_125624873_125625744_125625789_125626079_125626258_125631994_125632216_125633578_125633772_125633962_125634305_125635678_125635879_125639927_125640031_125640466_125640542_125642056_125642162_125643541_125643748_125644433_125644584_125650808_125650920_125654853_125655035_125655726_125655768_125656206_125656324_125659689_125659789_125660479_125660609_125661055_125661096_125662772_125662871_125663313
tx.24611	chr6	-	1881	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	-13	365	-13	0	multi-exon	FALSE	canonical	3	81	junction_4	57.8721651573535	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5252	False	NA	NA	False	NA	NA	NA	126916563	126900377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
tx.24612	chr6	-	3617	7	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	217	junction_3	20.3059925473574	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5256	False	NA	NA	False	NA	NA	NA	126916559	126900381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_126901304_126901880_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
tx.24613	chr6	-	2317	8	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	195	junction_2	26.1635359277927	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5269	False	NA	NA	False	NA	NA	NA	126916546	126900377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
tx.24614	chr6	-	3867	8	ISM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	53227	-1403	40834	-3	3prime_fragment	FALSE	canonical	3	88	junction_5	11.4357120549654	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAGACTGTTATTTAGT	NA	False	NA	NA	False	NA	NA	NA	128060445	127938361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344
tx.24615	chr6	-	1770	4	FSM	ENSMUSG00000048668.17	ENSMUST00000112152.8	2015	4	-77	322	-21	38	multi-exon	FALSE	canonical	3	13	junction_3	145.265274584121	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTCTGCCTCGAACTA	453	False	NA	NA	False	NA	NA	NA	128339852	128334284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_128335157_128336068_128336318_128339020_128339148_128339330
tx.24616	chr6	+	4781	7	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-220	264	-220	-264	intron_retention	FALSE	canonical	3	86	junction_6	42.0307427168892	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTCGTACACAGCCTG	NA	False	NA	NA	False	NA	NA	NA	128339709	128352845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496
tx.24617	chr6	+	6182	5	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-215	261	-215	-261	intron_retention	FALSE	canonical	3	167	junction_1	12.031209415516	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCGTACACAGCCTGGAG	NA	False	NA	NA	False	NA	NA	NA	128339714	128352848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919
tx.24618	chr6	-	2951	2	FSM	ENSMUSG00000030188.13	ENSMUST00000174488.2	447	2	-2504	0	1299	0	multi-exon	FALSE	canonical	3	526	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	131265340	131261475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_131261692_131262605
tx.24619	chr6	-	1608	2	ISM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-65	94298	-13	0	5prime_fragment	FALSE	canonical	3	105	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTAAATAGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	134543941	134517736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_134519009_134543605
tx.2462	chr11	-	3902	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-2	26	-2	-1	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	703	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTAACGTGTTTTT	7759	False	NA	NA	False	NA	NA	NA	20282715	20252205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
tx.24620	chr6	-	2361	5	NNC	ENSMUSG00000032718.5	novel	2376	4	NA	NA	92	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	5.59016994374947	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGATAGCTTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	134609359	134586166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_134587815_134594279_134594421_134598695_134599013_134599349_134599424_134609178
tx.24621	chr6	-	3036	3	Antisense	novelGene_ENSMUSG00000046733.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	135056239	135049854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr6_-_135052346_135052429_135052541_135055805
tx.24622	chr6	-	1093	6	FSM	ENSMUSG00000030220.14	ENSMUST00000032344.12	1193	6	50	50	50	-50	multi-exon	FALSE	canonical	3	8	junction_3	3.18747549010185	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATTTGCTTTCCTTTGC	5621	False	NA	NA	False	NA	NA	NA	136918704	136900702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918648
tx.24623	chr6	-	175	2	Intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAATTTTCCTCAAAC	NA	False	NA	NA	False	NA	NA	NA	138093187	137932817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_-_137932955_138093149
tx.24624	chr6	-	5171	14	ISM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	46	617	-5	128	intron_retention	FALSE	canonical	3	123	junction_2	17.5735142292845	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTCTATGTCGATATT	6226	False	NA	NA	False	NA	NA	NA	142332767	142307718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254
tx.24625	chr6	-	3318	14	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	-9	intron_retention	TRUE	canonical	2	13	junction_13	39.2829215944293	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTCTGGAAAGAGGAGA	6194	False	NA	NA	False	NA	NA	NA	142332799	142307110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142332747
tx.24626	chr6	+	4897	4	NIC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	595	junction_2	20.0720922897661	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	142332948	142349584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_142333096_142338055_142338148_142339653_142341996_142347268
tx.24627	chr6	+	6320	4	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-4779	-2	intron_retention	FALSE	canonical	3	681	junction_3	41.5237549147741	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTACTGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	142710912	142721438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_142716344_142716891_142717064_142717840_142717995_142720875
tx.24628	chr6	-	4323	26	FSM	ENSMUSG00000030279.16	ENSMUST00000203187.3	3494	26	-24	-805	-5	0	multi-exon	FALSE	canonical	3	13	junction_3	32.7664218369965	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	143045821	142956653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
tx.2463	chr11	-	5898	7	NIC	ENSMUSG00000020142.13	novel	3872	8	NA	NA	-32	0	intron_retention	FALSE	canonical	3	286	junction_3	12.0646407139026	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	7729	False	NA	NA	False	NA	NA	NA	20282745	20252204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
tx.24630	chr6	-	1517	2	Intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCATTGTCATATGATT	NA	False	NA	NA	False	NA	NA	NA	145571170	145569552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_-_145571021_145571121
tx.24631	chr6	+	4638	14	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-42	-8	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	41.3643072849016	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTGTTGGTGGGGTG	NA	False	NA	NA	False	NA	NA	NA	146626450	146680302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668181_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
tx.24632	chr6	+	6997	13	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-27	-5	intron_retention	FALSE	canonical	3	136	junction_9	10.5155308419922	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTGGTGGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	146626465	146680305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
tx.24633	chr6	-	8057	16	NNC	ENSMUSG00000030306.15	novel	8383	20	NA	NA	86367	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	2.79205221218292	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGCCTCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	148256766	148133927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_148139433_148144685_148144764_148146181_148146305_148147208_148147347_148148231_148148377_148148900_148149037_148150985_148151089_148164280_148164390_148172873_148173018_148186354_148186469_148196012_148196181_148207495_148207618_148226614_148226805_148237140_148237245_148237748_148237831_148255970
tx.24634	chr6	-	5891	16	ISM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	10006	0	4596	0	3prime_fragment	FALSE	canonical	3	65	junction_10	9.12481354451817	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	148787729	148743989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945
tx.24635	chr6	-	7755	22	NIC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-17	-2017	combination_of_known_junctions	FALSE	canonical	3	8	junction_20	5.58829356273547	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149003053	148891585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
tx.24636	chr6	-	4723	23	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-9	-5084	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	6.65020350151559	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGAGTAATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	149003045	148894652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148985152_148985196_148986368_148986435_149002680
tx.24637	chr6	+	8714	8	NIC	ENSMUSG00000003452.16	novel	2928	10	NA	NA	13	-942	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	8.17162836918577	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTCTTGCTAATTATT	195	False	NA	NA	False	NA	NA	NA	149310526	149463885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420722_149458141
tx.24638	chr7	+	172	2	Antisense	novelGene_ENSMUSG00000107413.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATATAAATAAGTAAATA	NA	False	NA	NA	False	NA	NA	NA	3236970	3327714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_+_3237117_3327688
tx.24639	chr7	+	3003	17	NIC	ENSMUSG00000078816.11	novel	3127	18	NA	NA	33	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	11.1242977306435	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGATGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	3352070	3379612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
tx.2464	chr11	-	7148	6	NIC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	3	-6	intron_retention	FALSE	canonical	3	286	junction_2	12.5698050899765	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAAGCCTGAGTAACGTG	7764	False	NA	NA	False	NA	NA	NA	20282710	20252210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
tx.24640	chr7	+	2595	4	FSM	ENSMUSG00000078815.9	ENSMUST00000183200.8	1977	4	-618	0	-618	0	multi-exon	FALSE	canonical	3	12	junction_3	6.16441400296898	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	NA	NA	NA	3472092	3484183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_3473509_3478953_3479029_3480334_3480473_3483217
tx.24641	chr7	-	3434	6	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	178	junction_2	26.8670802284134	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTTCCTGTCTGA	7913	False	NA	NA	False	NA	NA	NA	3696002	3686358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
tx.24642	chr7	-	698	2	FSM	ENSMUSG00000063838.7	ENSMUST00000140410.2	362	2	178	-514	178	-2	multi-exon	FALSE	canonical	3	148	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTCTATTCACTTTAC	NA	False	NA	NA	False	NA	NA	NA	4167263	4154260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4154787_4167091
tx.24643	chr7	-	993	4	FSM	ENSMUSG00000019254.17	ENSMUST00000145689.7	1370	4	-24	401	-8	238	multi-exon	FALSE	canonical	3	253	junction_2	4.92160768674447	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTAAGGCGGATCAATT	9933	False	NA	NA	False	NA	NA	NA	4504687	4492571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_4492892_4500215_4500335_4500414_4500546_4504264
tx.24644	chr7	+	3708	11	NNC	ENSMUSG00000034690.14	novel	3615	10	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5.98414572015087	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGATGACTTCTAAT	2989	False	NA	NA	False	NA	NA	NA	6048171	6108146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_6048221_6062986_6063095_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6095465_6095637_6101828_6102000_6103751_6103923_6107516
tx.24645	chr7	-	622	4	NNC	ENSMUSG00000046792.9	novel	576	3	NA	NA	-261	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	64.546279693118	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTCAGTGTTCCTTAG	9339	False	NA	NA	False	NA	NA	NA	6159257	6145399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_6145619_6146060_6146150_6158843_6158930_6159029
tx.24646	chr7	+	738	6	NNC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-446	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.9031163995671	2	6	1	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGATTCAGTGCGTAT	2766	False	NA	NA	False	NA	NA	NA	6263088	6284859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_6263181_6266905_6266967_6277340_6277373_6280418_6280541_6282412_6282451_6284466
tx.24647	chr7	-	4009	12	NIC	ENSMUSG00000000605.10	novel	2445	13	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	11.8732980511554	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTCTTTGGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	7301779	7285308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294726_7294818_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
tx.24648	chr7	-	2747	6	NNC	ENSMUSG00000092574.5	novel	1179	5	NA	NA	5	1383	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	15.2367975637927	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTCTCTGTGTGTCTC	NA	False	NA	NA	False	NA	NA	NA	8096035	8087941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_8089971_8091140_8091228_8091987_8092114_8093259_8093299_8095258_8095449_8095759
tx.24649	chr7	-	3207	5	FSM	ENSMUSG00000092624.3	ENSMUST00000173038.2	909	5	-194	-2104	-24	2104	multi-exon	FALSE	canonical	1	2	junction_1	2.6809513236909	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAATGGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	8292127	8283021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_8285708_8286871_8286959_8288132_8288259_8289403_8289442_8291857
tx.2465	chr11	+	2483	2	FSM	ENSMUSG00000049800.14	ENSMUST00000109586.3	5515	2	-11	3043	-11	913	multi-exon	FALSE	canonical	3	14	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTCTTTGTCTTTTGG	NA	False	NA	NA	False	NA	NA	NA	20581967	20599978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_20582274_20597801
tx.24650	chr7	-	5126	4	FSM	ENSMUSG00000034071.16	ENSMUST00000080348.12	2591	4	72	-2607	72	2607	multi-exon	FALSE	canonical	2	3	junction_1	2.86744175568088	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCCACTTATACATCTG	NA	False	NA	NA	False	NA	NA	NA	12156606	12146472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12151146_12152469_12152594_12155734_12155774_12156316
tx.24651	chr7	-	4697	2	FSM	ENSMUSG00000070822.6	ENSMUST00000211665.2	1969	2	-2730	2	493	0	multi-exon	FALSE	canonical	3	52	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTCATTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	12507773	12502018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12503673_12504730
tx.24652	chr7	-	4293	3	FSM	ENSMUSG00000070814.18	ENSMUST00000119139.10	3985	3	-302	-6	-10	6	multi-exon	FALSE	canonical	3	9	junction_1	5.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTCGTGGCTTCTG	1919	False	NA	NA	False	NA	NA	NA	13012372	12992887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12995567_13003260_13003574_13011071
tx.24653	chr7	-	3374	4	FSM	ENSMUSG00000070814.18	ENSMUST00000108532.11	3346	4	-27	-1	-27	0	multi-exon	FALSE	canonical	3	9	junction_1	5.18544972870135	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1617	False	NA	NA	False	NA	NA	NA	13012674	12992893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12995567_13003260_13003574_13011071_13011355_13012569
tx.24654	chr7	-	3296	4	NNC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	-48	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7.78888096369861	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGAGTTCGTGGCTTCT	1881	False	NA	NA	False	NA	NA	NA	13012410	12992888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_12995567_13003260_13003574_13011071_13011355_13012388
tx.24655	chr7	-	5801	14	NIC	ENSMUSG00000070808.5	novel	5975	15	NA	NA	-9	-6	combination_of_known_splicesites	TRUE	canonical	2	10	junction_3	4.77419096897935	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTACTCAGGCCCCCTC	NA	False	NA	NA	False	NA	NA	NA	15781855	15704602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_15706815_15709007_15709111_15709290_15709386_15709589_15709739_15710975_15711038_15712613_15712724_15712939_15713121_15713275_15713912_15721403_15723366_15727004_15727071_15730325_15730369_15730475_15730522_15733318_15733420_15781820
tx.24656	chr7	-	2756	7	ISM	ENSMUSG00000041375.20	ENSMUST00000041010.16	2379	11	2719	4	-534	-4	3prime_fragment	FALSE	canonical	3	130	junction_1	37.3842658525393	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCCACTGTGTCCTTG	1979	False	NA	NA	False	NA	NA	NA	16016265	16009392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782
tx.24657	chr7	+	1771	4	NNC	ENSMUSG00000002083.14	novel	1814	4	NA	NA	-56	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	95.7160151466595	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	NA	False	NA	NA	NA	16043484	16052128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_16043690_16046050_16046340_16047551_16047743_16051042
tx.24658	chr7	+	4748	6	ISM	ENSMUSG00000059273.10	ENSMUST00000209289.2	5853	14	22641	0	9003	0	3prime_fragment	FALSE	canonical	0	0	junction_2	35.1511024009205	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGTCTAGTCTCATC	NA	False	NA	NA	False	NA	NA	NA	16157772	16171621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
tx.24659	chr7	-	3202	2	ISM	ENSMUSG00000058230.13	ENSMUST00000171937.2	6251	8	114608	303	114608	-303	3prime_fragment	FALSE	canonical	3	96	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATACTCTGCTCCTGAT	9920	False	NA	NA	False	NA	NA	NA	16234254	16230479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_16231936_16232508
tx.2466	chr11	-	3165	8	ISM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	14499	0	52	0	3prime_fragment	FALSE	canonical	3	125	junction_7	12.8714206437267	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTTTGTCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	20677090	20635083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684
tx.24660	chr7	+	2022	4	FSM	ENSMUSG00000030411.17	ENSMUST00000032571.10	8372	4	-10	6360	-10	-6360	multi-exon	TRUE	canonical	1	1	junction_1	1.4142135623731	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTCCCTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	18659802	18692884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_18660090_18676140_18676285_18684377_18684545_18691460
tx.24661	chr7	-	1828	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108459.9	1849	13	18	3	18	-3	multi-exon	FALSE	canonical	3	11	junction_12	5.52959210872636	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGCTGTGCGATCTGC	6350	False	NA	NA	False	NA	NA	NA	19133828	19128367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133733
tx.24662	chr7	+	3306	3	FSM	ENSMUSG00000068962.8	ENSMUST00000206547.2	3154	3	-42	-110	-16	110	multi-exon	FALSE	canonical	2	10	junction_2	13	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGCCTCAGTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	23874468	23881853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_23875592_23877174_23877302_23879797
tx.24663	chr7	+	6062	4	NNC	ENSMUSG00000041037.9	novel	6083	3	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.68178700572909	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTGTGTCTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	24230080	24238024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_24230330_24230808_24231341_24232690_24236241_24236293
tx.24664	chr7	+	4516	2	NNC	ENSMUSG00000041037.9	novel	6083	3	NA	NA	3343	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTGTCTTCTATTTA	NA	False	NA	NA	False	NA	NA	NA	24233456	24238025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_24236241_24236293
tx.24665	chr7	-	4505	20	NNC	ENSMUSG00000003378.10	novel	3763	20	NA	NA	-4584	-27	intron_retention	FALSE	canonical	1	1	junction_16	1.68749679388225	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAGAACAAAAC	4561	False	NA	NA	False	NA	NA	NA	24776355	24709300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_24710220_24713010_24713133_24713214_24713344_24714729_24714956_24715232_24715399_24721865_24722040_24722410_24722521_24722707_24722822_24745598_24745803_24757708_24757817_24757918_24758024_24758365_24758519_24759894_24760057_24760154_24760209_24762302_24762482_24764553_24764720_24764797_24764896_24767434_24767600_24767868_24767998_24775333
tx.24666	chr7	-	2708	4	FSM	ENSMUSG00000040857.16	ENSMUST00000045847.15	3505	4	30	767	-1	-767	multi-exon	FALSE	canonical	3	7	junction_2	2.82842712474619	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4511	False	NA	NA	False	NA	NA	NA	24950156	24942752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24950003
tx.24667	chr7	+	7791	20	NIC	ENSMUSG00000005442.14	novel	8221	21	NA	NA	2813	-1	intron_retention	TRUE	canonical	3	16	junction_1	29.1130188581674	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	24970624	24993569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_24973059_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
tx.24668	chr7	+	6035	20	FSM	ENSMUSG00000005442.14	ENSMUST00000005578.13	6099	20	61	3	61	0	multi-exon	FALSE	canonical	3	38	junction_9	26.9909187559605	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	3312	False	NA	NA	False	NA	NA	NA	24981664	24993570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
tx.24669	chr7	+	3346	11	ISM	ENSMUSG00000005442.14	ENSMUST00000163320.8	6096	20	6509	1	-575	-1	3prime_fragment	FALSE	canonical	3	37	junction_4	28.5383951896388	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	6368	False	NA	NA	False	NA	NA	NA	24988112	24993569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
tx.2467	chr11	-	3966	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	32	0	32	0	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTTTGTCTTTGTA	9292	False	NA	NA	False	NA	NA	NA	20691557	20635083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
tx.24670	chr7	+	3695	11	ISM	ENSMUSG00000005442.14	ENSMUST00000169266.8	8221	21	20633	14	-926	0	3prime_fragment	FALSE	canonical	3	37	junction_4	29.250641018617	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	6017	False	NA	NA	False	NA	NA	NA	24987761	24993570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
tx.24671	chr7	-	1660	5	ISM	ENSMUSG00000003123.16	ENSMUST00000206861.2	3171	9	4557	-16	259	0	3prime_fragment	FALSE	canonical	3	29	junction_2	3.24037034920393	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGAGTGTGTTTTCCCAG	8517	False	NA	NA	False	NA	NA	NA	25084092	25079069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797
tx.24672	chr7	+	3104	4	NNC	ENSMUSG00000053714.9	novel	1887	7	NA	NA	1205	-32514	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.64279609239471	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAAAGAAATT	7572	False	NA	NA	False	NA	NA	NA	25096043	25233328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_25096332_25116825_25116935_25184387_25184482_25230715
tx.24673	chr7	+	4751	5	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	1190	junction_1	35.2739280489145	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGATTCCGGTGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	25358604	25367451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
tx.24674	chr7	+	1505	7	FSM	ENSMUSG00000078786.10	ENSMUST00000179391.8	1748	7	82	161	82	-2	multi-exon	FALSE	canonical	2	9	junction_1	4.48763733927875	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACATTTTCAGTCCA	NA	False	NA	NA	False	NA	NA	NA	26895287	26903584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_26895533_26896330_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
tx.24675	chr7	+	5907	9	FSM	ENSMUSG00000063160.13	ENSMUST00000134215.2	3153	9	-2594	-160	1	0	multi-exon	FALSE	canonical	3	70	junction_3	12.1320855585509	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGGGAAATCAAGGTG	NA	False	NA	NA	False	NA	NA	NA	26958208	26981566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
tx.24676	chr7	-	5489	29	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	12	-1	intron_retention	FALSE	canonical	3	195	junction_23	121.224508155534	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	27033061	27004565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
tx.24677	chr7	+	1383	2	NNC	ENSMUSG00000055200.8	novel	1329	2	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGAATTGTAATTAAATC	NA	False	NA	NA	False	NA	NA	NA	27173202	27176788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_27173362_27175564
tx.24678	chr7	-	1055	2	Intergenic	novelGene_353	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTCTGCCCTGACAA	7881	False	NA	NA	False	NA	NA	NA	27388711	27387553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_27388097_27388199
tx.24679	chr7	-	7297	5	NIC	ENSMUSG00000070709.13	novel	5158	4	NA	NA	-3	1979	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	17.9913173503221	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	27628888	27604837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_27611687_27620121_27620221_27625708_27625836_27626825_27626879_27628719
tx.2468	chr11	-	3718	4	FSM	ENSMUSG00000042363.15	ENSMUST00000144441.8	913	4	-30	-2775	-30	1	multi-exon	FALSE	canonical	3	309	junction_3	21.6384431561566	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTGGGTTATTACATG	NA	False	NA	NA	False	NA	NA	NA	20780785	20773574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275
tx.24680	chr7	-	6312	6	NNC	ENSMUSG00000063047.10	novel	1907	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	28.3125413906982	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCATCATGTGACC	NA	False	NA	NA	False	NA	NA	NA	27678587	27658559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676402_27678514
tx.24681	chr7	-	6101	5	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	2	7	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	28.5864915650732	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCATGTGACCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	27678594	27658552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27678514
tx.24682	chr7	+	4379	5	NNC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	-18	990	intron_retention	FALSE	canonical	1	7	junction_1	22.7321358433386	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	8827	False	NA	NA	False	NA	NA	NA	28392255	28399753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_28392357_28392694_28393076_28394155_28394268_28394430_28394527_28396064
tx.24683	chr7	+	1944	5	FSM	ENSMUSG00000037463.15	ENSMUST00000108281.8	1948	5	4	0	4	0	multi-exon	FALSE	canonical	3	43	junction_1	9.31396800509858	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTTCATATCTTTTT	9144	False	NA	NA	False	NA	NA	NA	28392572	28398760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
tx.24684	chr7	+	572	4	FSM	ENSMUSG00000037166.6	ENSMUST00000048187.6	950	4	-31	409	-27	-409	multi-exon	FALSE	canonical	3	93	junction_2	2.05480466765633	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCCGGATTTTCCT	3976	False	NA	NA	False	NA	NA	NA	28988705	28992817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28988961_28990934_28991016_28991475_28991509_28992614
tx.24685	chr7	-	4259	12	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	10	1635	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	7.76940386153509	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTCGTTGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	29218027	29063373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
tx.24686	chr7	+	2862	5	FSM	ENSMUSG00000047473.15	ENSMUST00000032803.12	3558	5	-8	704	-8	-704	multi-exon	FALSE	canonical	3	6	junction_3	9.39414711402797	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCTCCGAGTGACTGA	NA	False	NA	NA	False	NA	NA	NA	29483414	29493423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_29484327_29485643_29485729_29487473_29487601_29488762_29488862_29491784
tx.24687	chr7	+	198	2	Antisense	novelGene_ENSMUSG00000059975.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTAATTGGTCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	29644881	29650651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_+_29645030_29650601
tx.24688	chr7	-	4843	7	NIC	ENSMUSG00000058447.9	novel	2374	9	NA	NA	-110	2634	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	48.1756047070391	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCATGTGTTGCTGTGTT	9930	False	NA	NA	False	NA	NA	NA	29789945	29752824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29780515_29780643_29786524_29786585_29789712
tx.24689	chr7	-	3222	6	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	-24	-420	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	15.0332963783729	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATTTTTAAAATCACTC	NA	False	NA	NA	False	NA	NA	NA	29772349	29754333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29772205
tx.2469	chr11	-	3350	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	11	1	11	-1	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	492	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTTCTGGGTTATTACA	NA	False	NA	NA	False	NA	NA	NA	20781045	20773576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
tx.24690	chr7	+	3570	3	NNC	ENSMUSG00000049421.14	novel	594	4	NA	NA	1	0	intron_retention	FALSE	canonical	2	2	junction_1	67.5	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCCTTTGTTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	29794603	29807044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_29794637_29799000_29799148_29803654
tx.24691	chr7	-	2861	3	FSM	ENSMUSG00000037029.9	ENSMUST00000136508.3	585	3	-41	-2235	-5	780	multi-exon	FALSE	canonical	1	5	junction_1	4.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATCCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	29869157	29859913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_29862654_29862751_29862799_29869083
tx.24692	chr7	+	2348	5	ISM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	-24	-1	-13	0	intron_retention	FALSE	canonical	3	431	junction_1	14.8576579581036	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30008188	30013729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661
tx.24693	chr7	+	1017	7	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	165.266451526013	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30008191	30013729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30011930_30012133_30013343
tx.24694	chr7	-	3214	3	FSM	ENSMUSG00000036957.9	ENSMUST00000046351.7	2886	3	-328	0	-328	0	multi-exon	FALSE	canonical	3	10	junction_2	2	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGGGCTGTTCCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	30062525	30054913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30055529_30058808_30060240_30061357
tx.24695	chr7	+	2810	20	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	4081	-6	4081	6	3prime_fragment	FALSE	canonical	2	12	junction_1	14.2015566233535	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30163230	30186654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
tx.24696	chr7	-	2757	5	ISM	ENSMUSG00000036882.8	ENSMUST00000044338.5	4280	21	7572	-8	2137	8	3prime_fragment	FALSE	canonical	1	2	junction_1	1.78535710713571	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAGTGAATGATAGAGAC	6162	False	NA	NA	False	NA	NA	NA	30226033	30221642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30223272_30223368_30224014_30225379_30225455_30225538_30225685_30225771
tx.24697	chr7	-	1010	3	ISM	ENSMUSG00000036864.17	ENSMUST00000215288.2	2465	12	11875	-5	9273	5	3prime_fragment	FALSE	canonical	3	54	junction_1	1.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTACTGTTCATCT	3700	False	NA	NA	False	NA	NA	NA	30239817	30238553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30239008_30239173_30239256_30239343
tx.24698	chr7	-	2433	11	NIC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	16.4805946494658	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTACTGTTCATCT	NA	False	NA	NA	False	NA	NA	NA	30251729	30238553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245654_30245727_30245853_30248465_30248634_30249031_30249129_30251632
tx.24699	chr7	+	2125	3	FSM	ENSMUSG00000106236.3_ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	-765	3	-21	0	multi-exon	FALSE	canonical	3	14	junction_1	10.5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	30251927	30254865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_30252958_30253686_30253810_30253893
tx.247	chr1	+	2628	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	325	0	-12	0	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	871	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	45834650	45862779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
tx.2470	chr11	+	3501	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	13	0	13	0	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	222	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCGAATTTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	21041303	21100323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
tx.24700	chr7	-	915	6	NIC	ENSMUSG00000006315.10	novel	870	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	739	junction_5	23.0685933684739	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9299	False	NA	NA	False	NA	NA	NA	30428923	30427125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
tx.24701	chr7	-	1809	2	FSM	ENSMUSG00000051314.12	ENSMUST00000186534.2	730	2	254	-1333	254	4	multi-exon	FALSE	canonical	2	6	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTCACGGGTTTTG	6313	False	NA	NA	False	NA	NA	NA	30520148	30517777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30519540_30520101
tx.24702	chr7	+	666	2	FSM	ENSMUSG00000100029.2	ENSMUST00000189744.2	928	2	270	-8	270	8	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGTGCCCAGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	30584725	30585879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_30585156_30585643
tx.24703	chr7	-	2172	9	FSM	ENSMUSG00000058239.14	ENSMUST00000171338.8	994	9	-590	-588	-544	582	multi-exon	FALSE	canonical	2	3	junction_8	43.3688756483264	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGTCCATGTTGG	8220	False	NA	NA	False	NA	NA	NA	30656772	30645416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30656120
tx.24704	chr7	-	5689	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_14	77.9468764964675	9	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5740	False	NA	NA	False	NA	NA	NA	30850453	30829551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
tx.24705	chr7	+	168	2	Antisense	novelGene_ENSMUSG00000052997.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGCCAGAGCGAGCAG	NA	False	NA	NA	False	NA	NA	NA	33863551	33871302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_+_33863697_33871279
tx.24706	chr7	-	4989	5	ISM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	-54	561	-1	-561	5prime_fragment	FALSE	canonical	3	753	junction_1	24.5089269450949	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGCCCCCCCCCCCA	5731	False	NA	NA	False	NA	NA	NA	33896087	33884618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
tx.24707	chr7	-	6920	3	ISM	ENSMUSG00000030499.10	ENSMUST00000205419.2	743	4	-1276	-1163	-1276	0	intron_retention	FALSE	canonical	3	27	junction_2	7.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGAGGCTCCGTCC	8368	False	NA	NA	False	NA	NA	NA	34349445	34338443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_34339875_34341232_34341539_34344262
tx.24708	chr7	-	4325	7	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-85	0	intron_retention	FALSE	canonical	3	19	junction_5	5.04700130990891	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTGTTCCAGTCTCTAC	NA	False	NA	NA	False	NA	NA	NA	34914802	34900302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_34902095_34902353_34902487_34902692_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
tx.24709	chr7	-	3200	8	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-9	0	intron_retention	FALSE	canonical	2	6	junction_7	326.47661415764	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	NA	False	NA	NA	NA	37718976	37659416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37718534
tx.2471	chr11	+	4689	23	FSM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-380	14	-380	0	multi-exon	FALSE	canonical	3	201	junction_2	46.1409984237141	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	21188900	21271122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
tx.24710	chr7	+	3322	5	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2083	1499	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	4.9749371855331	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAAAATTACTTTCATT	NA	False	NA	NA	False	NA	NA	NA	39136778	39149724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_39136816_39138848_39138976_39143154_39143248_39145691_39145802_39146769
tx.24711	chr7	+	3399	6	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2079	1501	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	6.01331855134916	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAATTACTTTCATTAT	NA	False	NA	NA	False	NA	NA	NA	39136782	39149726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_39136816_39138848_39138976_39139461_39139541_39143154_39143248_39145691_39145802_39146769
tx.24712	chr7	+	5503	5	ISM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	310	10824	286	4555	3prime_fragment	FALSE	canonical	3	54	junction_4	2.34520787991171	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	39202234	39219189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
tx.24713	chr7	-	5935	4	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-22	4436	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	109.191981797607	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	41210275	41190661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_41196224_41197139_41197201_41197407_41197582_41210137
tx.24716	chr7	+	4943	3	FSM	ENSMUSG00000074165.11	ENSMUST00000170770.2	2499	3	-2112	-332	-2112	-3	multi-exon	FALSE	canonical	3	43	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATAAGAATATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	41294895	41300352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_41297042_41297242_41297304_41297616
tx.24717	chr7	+	3519	5	FSM	ENSMUSG00000056592.15	ENSMUST00000107972.8	3495	5	-24	0	-24	0	multi-exon	FALSE	canonical	1	5	junction_1	0.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTGTACATTATTTCT	NA	False	NA	NA	False	NA	NA	NA	43211655	43224885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_43211846_43214037_43214268_43216691_43216819_43217068_43217168_43222012
tx.24718	chr7	+	1842	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-303	-8	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.3245957266899	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTCCTTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	43362519	43376950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_43362686_43363202_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
tx.24719	chr7	+	3636	2	NIC	ENSMUSG00000054046.8	novel	1809	6	NA	NA	5492	-789	intron_retention	FALSE	canonical	3	75	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCGCCTCCCTCCCCTA	NA	False	NA	NA	False	NA	NA	NA	43369874	43376169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_43373316_43375974
tx.2472	chr11	+	4615	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-385	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	78.5193766977732	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	21188895	21271122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
tx.24720	chr7	+	3426	5	NNC	ENSMUSG00000045411.17	novel	3336	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_1	294.015730871666	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
tx.24721	chr7	-	1022	7	ISM	ENSMUSG00000038670.12	ENSMUST00000165208.4	3611	28	17773	18	2195	-18	3prime_fragment	FALSE	canonical	3	6	junction_5	5.14511634681104	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTCCATCTTTCCAG	NA	False	NA	NA	False	NA	NA	NA	44156307	44151140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44151267_44153060_44153248_44154422_44154560_44154659_44154820_44154989_44155130_44155475_44155672_44156231
tx.24722	chr7	+	5239	6	NIC	ENSMUSG00000062785.15	novel	2731	5	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	3.03315017762062	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGGCTTTTCTCATTTG	4121	False	NA	NA	False	NA	NA	NA	44240317	44254175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_44241183_44244584_44245693_44247804_44248000_44248229_44248358_44250292_44250353_44251292
tx.24723	chr7	-	4142	24	NIC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_23	21.0276620404758	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGCTGCGTTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	44282220	44255227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282174
tx.24724	chr7	+	3876	10	NIC	ENSMUSG00000002963.18	novel	1573	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	182	junction_3	30.1514694685203	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9516	False	NA	NA	False	NA	NA	NA	44506763	44512074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
tx.24726	chr7	-	3638	15	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	15	18	intron_retention	TRUE	canonical	3	357	junction_10	40.9162908527014	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCTTCTTCATGTGTG	9355	False	NA	NA	False	NA	NA	NA	44803975	44791240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44799191_44803815
tx.24727	chr7	+	2928	9	NIC	ENSMUSG00000003423.16	novel	1072	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	336	junction_3	22.7705950734714	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	NA	False	NA	NA	NA	44803760	44809489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
tx.24728	chr7	-	2257	4	ISM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	1611	-25	-117	20	3prime_fragment	FALSE	canonical	3	86	junction_3	2.05480466765633	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTTATTCTCCTTCAAA	6055	False	NA	NA	False	NA	NA	NA	44886628	44883035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583
tx.24729	chr7	-	2120	7	FSM	ENSMUSG00000030798.16	ENSMUST00000211373.2	1428	7	-162	-530	21	1	multi-exon	FALSE	canonical	3	58	junction_1	11.4661337085446	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTTTTTTTTTTTTTTT	4223	False	NA	NA	False	NA	NA	NA	44888460	44883063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
tx.2473	chr11	+	4659	23	FSM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	-386	0	-386	0	multi-exon	FALSE	canonical	3	123	junction_2	56.2718460791631	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	21188894	21271122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
tx.24730	chr7	-	3873	18	ISM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	11634	-614	-10567	91	3prime_fragment	FALSE	canonical	3	115	junction_15	18.4741472779411	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAGTACACTGTAGCT	3243	False	NA	NA	False	NA	NA	NA	44971559	44951964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422
tx.24731	chr7	-	3332	19	NIC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	4712	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	19.3645979643521	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTTTGTTCTTAAGAT	9518	False	NA	NA	False	NA	NA	NA	45004825	44988546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582
tx.24732	chr7	+	2292	6	FSM	ENSMUSG00000118462.2	ENSMUST00000238591.2	2278	6	-7	-7	-7	-2	multi-exon	TRUE	canonical	0	0	junction_4	1.01980390271856	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTCCATGTTCTTTAGT	5288	False	NA	NA	False	NA	NA	NA	45067769	45071276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_45067950_45068137_45068309_45068402_45068568_45069133_45069253_45069466_45070807_45070959
tx.24733	chr7	+	5055	15	NIC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	2	18	intron_retention	FALSE	canonical	3	93	junction_7	60.8891599212731	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTGTGGTGGGTCT	1029	False	NA	NA	False	NA	NA	NA	45084269	45106061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
tx.24734	chr7	+	1643	10	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	25.8246699929915	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTCTGTTCTGTGCGTT	1285	False	NA	NA	False	NA	NA	NA	45165232	45171802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_45165424_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
tx.24735	chr7	+	806	5	ISM	ENSMUSG00000023467.19	ENSMUST00000085331.14	1525	10	4982	0	3776	0	3prime_fragment	FALSE	canonical	3	69	junction_2	4.38748219369606	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCTGTGCGTTTGGA	5060	False	NA	NA	False	NA	NA	NA	45169007	45171806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
tx.24736	chr7	-	3094	5	NNC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	33	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	5.06828373317832	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACCCAGCAATTGAGT	NA	False	NA	NA	False	NA	NA	NA	45343793	45327109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_45328949_45333603_45333716_45334689_45335292_45337492_45337638_45343397
tx.24737	chr7	-	2439	4	FSM	ENSMUSG00000040364.9	ENSMUST00000040636.9	2470	4	31	0	31	0	multi-exon	FALSE	canonical	0	0	junction_3	5.43650214343336	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACCCAGCAATTGAGT	NA	False	NA	NA	False	NA	NA	NA	45343795	45327109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45328949_45333603_45333716_45334689_45334780_45343397
tx.24738	chr7	-	2311	5	ISM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	1546	-21	-218	3	3prime_fragment	FALSE	canonical	3	106	junction_2	12.747548783982	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACATCCCTTTCAGTTATT	7503	False	NA	NA	False	NA	NA	NA	45363085	45359687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683
tx.24739	chr7	-	628	5	FSM	ENSMUSG00000040212.13	ENSMUST00000038876.13	736	5	108	0	6	0	multi-exon	FALSE	canonical	3	47	junction_4	7.77817459305202	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGCTCCTCTTCCTTC	4466	False	NA	NA	False	NA	NA	NA	45570720	45567446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570665
tx.2474	chr11	+	4585	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-380	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	71.8904699485369	42	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	NA	False	NA	NA	NA	21188900	21271121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
tx.24740	chr7	-	4855	23	NIC	ENSMUSG00000014418.17	novel	4702	23	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	16.0075524530513	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGATATGAGATTTAC	NA	False	NA	NA	False	NA	NA	NA	46445478	46409891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427525_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
tx.24741	chr7	+	7806	35	NIC	ENSMUSG00000052512.18	novel	10665	39	NA	NA	8	333	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.83391994212982	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGATTCCACTTGGTGC	NA	False	NA	NA	False	NA	NA	NA	48895944	49256902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_48896947_49011845_49011964_49022064_49022118_49047830_49047904_49058380_49058655_49069921_49070089_49102146_49103255_49107843_49107957_49111656_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
tx.24742	chr7	-	579	2	Genic_Genomic	ENSMUSG00000099647.2	novel	321	1	NA	NA	-46	275	multi-exon	FALSE	canonical	3	74	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGCTACTTCAAAGC	NA	False	NA	NA	False	NA	NA	NA	54062272	54061630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr7_-_54062012_54062074
tx.24743	chr7	-	3111	6	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	79.9474827621233	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGGGGTTTCCCAGCC	NA	False	NA	NA	False	NA	NA	NA	55612196	55581035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55594228_55594458_55611199_55611321_55611947
tx.24744	chr7	+	3359	16	ISM	ENSMUSG00000030451.17	ENSMUST00000164095.3	15261	93	156337	-37	-13774	0	3prime_fragment	FALSE	canonical	3	42	junction_3	10.2558384455988	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGGCTGAATTTCTTAA	3392	False	NA	NA	False	NA	NA	NA	55856473	55881548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
tx.24745	chr7	-	3765	2	NIC	ENSMUSG00000033458.18	novel	3162	3	NA	NA	2	19	intron_retention	FALSE	canonical	3	12	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAGAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	64023826	64019881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_64023503_64023682
tx.24746	chr7	-	1503	7	ISM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	37	17621	37	0	5prime_fragment	FALSE	canonical	3	14	junction_3	2.80871659105879	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTCTGGCCTACAACC	NA	False	NA	NA	False	NA	NA	NA	66077228	66058258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
tx.24747	chr7	-	3669	2	ISM	ENSMUSG00000030509.18	ENSMUST00000131320.8	4484	6	28927	0	-4933	0	3prime_fragment	FALSE	canonical	3	62	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	66309705	66294312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_66297674_66309397
tx.24748	chr7	+	1430	3	ISM	ENSMUSG00000053091.17	ENSMUST00000128486.8	1419	5	-28	667	21	-667	intron_retention	FALSE	canonical	3	70	junction_2	8	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATAGTTTTTTATTACA	NA	False	NA	NA	False	NA	NA	NA	66339668	66358983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_66339772_66345923_66346055_66357787
tx.2475	chr11	-	2512	10	FSM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	-359	530	-359	5	multi-exon	TRUE	canonical	3	61	junction_9	120.111779214916	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTAGTGCTCACTCTT	NA	False	NA	NA	False	NA	NA	NA	21320836	21271667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
tx.24750	chr7	-	2926	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	-5	2	-5	0	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCTTCTCTCCTCCT	567	False	NA	NA	False	NA	NA	NA	67294984	67163159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
tx.24751	chr7	-	2762	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	26.9162474167556	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	557	False	NA	NA	False	NA	NA	NA	67294994	67163157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_67164927_67179333_67179494_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
tx.24752	chr7	-	6130	5	FSM	ENSMUSG00000030554.17	ENSMUST00000051389.10	6953	5	-103	926	-103	-926	multi-exon	FALSE	canonical	1	1	junction_1	2.69258240356725	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATACTAATTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	67409593	67380841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_67383302_67384207_67386655_67388852_67388924_67401551_67401677_67408566
tx.24753	chr7	-	3686	14	NNC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-13991	9150	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	11.850648497972	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTACTGGCTTGTGACTG	NA	False	NA	NA	False	NA	NA	NA	73167308	73138304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73167250
tx.24754	chr7	-	4338	15	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-5	9097	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	12.7585505542322	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTTAATGAGTTGAACA	NA	False	NA	NA	False	NA	NA	NA	73191499	73138357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
tx.24755	chr7	-	3781	17	FSM	ENSMUSG00000059146.13	ENSMUST00000039431.14	19703	17	-7	15929	-7	492	multi-exon	FALSE	canonical	1	2	junction_5	14.7690554877419	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTTTTTGGAAATCAAT	NA	False	NA	NA	False	NA	NA	NA	78228163	77841635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
tx.24756	chr7	-	3503	7	NNC	ENSMUSG00000030610.14	novel	2269	5	NA	NA	85	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	44.5782707405999	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGTTTGTTTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	78496926	78471293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_78473009_78477319_78477413_78477710_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
tx.24757	chr7	+	6780	13	NIC	ENSMUSG00000030607.8	novel	7355	17	NA	NA	-10354	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	4.46203117674252	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATTTCTTTTCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	78739144	78764842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
tx.24758	chr7	+	4003	7	FSM	ENSMUSG00000030607.8	ENSMUST00000206779.2	2596	7	-942	-465	-942	-7	multi-exon	FALSE	canonical	2	3	junction_1	4.81028989655394	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTATTTCTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	78748556	78764840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
tx.24759	chr7	-	3457	5	FSM	ENSMUSG00000030606.9	ENSMUST00000206092.2	3358	5	-138	39	-138	-39	multi-exon	FALSE	canonical	2	5	junction_4	1.87082869338697	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAATAAAAAATAAAAAA	2137	False	NA	NA	False	NA	NA	NA	78780904	78764888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_78767242_78767596_78767900_78771394_78771764_78773117_78773300_78780654
tx.2476	chr11	-	2077	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-28	-5	-28	5	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	344	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTAGTGCTCACTCTT	NA	False	NA	NA	False	NA	NA	NA	21321229	21271667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
tx.24760	chr7	-	1142	2	NNC	ENSMUSG00000108387.2	novel	235	2	NA	NA	98	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTCCTCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	78922685	78921439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_78922092_78922195
tx.24761	chr7	-	1016	3	NNC	ENSMUSG00000108387.2	novel	239	2	NA	NA	90	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCCTCTGTAATCTGC	NA	False	NA	NA	False	NA	NA	NA	78922693	78921435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_78922092_78922195_78922308_78922445
tx.24762	chr7	+	5421	6	NNC	ENSMUSG00000039202.13	novel	6877	11	NA	NA	-25	-13574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.3368481479233	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCTCCATTTTATTAG	2752	False	NA	NA	False	NA	NA	NA	78922976	78981545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78976879
tx.24763	chr7	+	1672	4	NIC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	53.8537113133554	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCTCCAGAAGGCTTC	NA	False	NA	NA	False	NA	NA	NA	79992888	79996455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_79993204_79993286_79993343_79993463_79993705_79995395
tx.24764	chr7	-	955	5	ISM	ENSMUSG00000053158.11	ENSMUST00000206728.2	2707	18	7366	-12	383	2	3prime_fragment	FALSE	canonical	2	10	junction_1	2.77263412660235	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGATATTGACATGTGTG	NA	False	NA	NA	False	NA	NA	NA	80029801	80027508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565
tx.24765	chr7	+	7581	9	NIC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	-186	-1	intron_retention	FALSE	canonical	3	63	junction_1	17.6807628511894	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTCATGTTCTGAAGCC	NA	False	NA	NA	False	NA	NA	NA	80643242	80694911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80688100_80688300_80688414_80688877_80689014_80691095
tx.24766	chr7	+	2662	8	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	37235	1	4	-1	3prime_fragment	FALSE	canonical	3	12	junction_3	5.00611870512435	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACGGTGTGATGATTA	NA	False	NA	NA	False	NA	NA	NA	80744582	80755359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
tx.24767	chr7	+	1950	3	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	53251	1	53251	-1	3prime_fragment	FALSE	canonical	3	128	junction_1	0.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	NA	False	NA	NA	NA	80817848	80820163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_80818811_80818914_80819027_80819287
tx.24768	chr7	-	5364	10	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	-19	0	intron_retention	FALSE	canonical	3	48	junction_6	9.89325746202314	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTTTTGTCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81104525	80996773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
tx.24769	chr7	-	2787	19	ISM	ENSMUSG00000062444.16	ENSMUST00000238711.2	3230	25	16393	-234	1124	0	3prime_fragment	FALSE	canonical	3	56	junction_15	11.3920049937567	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCACCTTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	81127034	81110146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693
tx.2477	chr11	-	1288	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	120	550	120	-455	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	759	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	21521814	21507241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
tx.24770	chr7	+	819	5	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	1	-15	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	35.5457451743524	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAACTATCA	NA	False	NA	NA	False	NA	NA	NA	81173311	81181227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_81173425_81178534_81178689_81178904_81179007_81179094_81179276_81180958
tx.24771	chr7	+	721	4	FSM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	-11	15	-3	-15	multi-exon	FALSE	canonical	3	35	junction_1	29.9777695412228	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAACTATCA	NA	False	NA	NA	False	NA	NA	NA	81173307	81181227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_81173425_81178534_81178689_81179094_81179276_81180958
tx.24772	chr7	-	1989	4	NNC	ENSMUSG00000025102.15	novel	504	4	NA	NA	0	2348	intron_retention	FALSE	canonical	3	105	junction_1	88.8606899715629	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCAGGCGTGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	81439213	81429581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197
tx.24773	chr7	-	1187	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	-5	192	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATTGATAA	NA	False	NA	NA	False	NA	NA	NA	81439231	81431737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
tx.24774	chr7	+	1905	2	Genic_Genomic	ENSMUSG00000063902.14	novel	1378	1	NA	NA	-77	509	multi-exon	FALSE	canonical	0	0	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAAAAAAAAAGAAGTTG	NA	False	NA	NA	False	NA	NA	NA	83405034	83406998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr7_+_83406475_83406533
tx.24775	chr7	-	1592	7	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	7	9	combination_of_known_junctions	FALSE	canonical	3	150	junction_5	197.190615620746	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	84339084	84264252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84338953
tx.24776	chr7	-	3629	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	8	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	50.1052147423669	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTTTATTTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	88987987	88788918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88929174_88929209_88953888_88953982_88956344_88956473_88987655
tx.24777	chr7	-	970	2	FSM	ENSMUSG00000097162.3	ENSMUST00000209166.2	271	2	-193	-506	-149	497	multi-exon	FALSE	canonical	3	49	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGGCAACAGCGTTCAT	NA	False	NA	NA	False	NA	NA	NA	89779341	89773532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_89774241_89779079
tx.24778	chr7	+	5535	3	ISM	ENSMUSG00000039361.12	ENSMUST00000207084.2	2929	17	26641	-521	-945	348	3prime_fragment	FALSE	canonical	3	187	junction_1	6.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTTTTAAATTAAGAAT	NA	False	NA	NA	False	NA	NA	NA	89841361	89858659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_89844923_89846123_89846229_89856790
tx.24779	chr7	+	3723	2	ISM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-855	-930	85	644	intron_retention	FALSE	canonical	3	58	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTTACTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	90092021	90095956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_90093296_90093507
tx.2478	chr11	+	2611	18	FSM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	-128	309	-128	-309	multi-exon	FALSE	canonical	2	7	junction_1	3.74350648863466	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATAATGTGTATGCT	NA	False	NA	NA	False	NA	NA	NA	21522106	21848680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
tx.24780	chr7	-	3890	4	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	3	1	intron_retention	FALSE	canonical	3	210	junction_1	27.6526068692749	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGAGGTCCCTGT	6029	False	NA	NA	False	NA	NA	NA	90125200	90116644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_90118370_90118777_90118890_90119972_90121928_90125102
tx.24781	chr7	-	2725	12	FSM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	35	22	-5	-6	multi-exon	FALSE	canonical	2	2	junction_3	4.22702834093188	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATCTGTATTTTACTG	NA	False	NA	NA	False	NA	NA	NA	92286315	92233412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
tx.24782	chr7	-	2694	9	ISM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	41	20437	1	317	5prime_fragment	FALSE	canonical	2	4	junction_3	3.40725329260975	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGAGCCTCCGGGTAACT	NA	False	NA	NA	False	NA	NA	NA	92286309	92253827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
tx.24783	chr7	+	5388	10	FSM	ENSMUSG00000004508.7	ENSMUST00000004622.7	6168	10	93	687	93	-687	multi-exon	FALSE	canonical	0	0	junction_1	1.33333333333333	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGTAGACTGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	96730885	96957466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_96731114_96872679_96872981_96921008_96921250_96948034_96948610_96949505_96949577_96950577_96950843_96951575_96951667_96952230_96952337_96953356_96953483_96954082
tx.24784	chr7	-	4392	11	FSM	ENSMUSG00000035713.16	ENSMUST00000139582.9	4262	11	-156	26	-156	0	multi-exon	FALSE	canonical	2	4	junction_5	1.83303027798234	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCAGGATGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	96981383	96958612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498_96975268_96981043
tx.24786	chr7	-	2681	2	NNC	ENSMUSG00000049580.13	novel	2597	2	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGCATTTGCTGACAAA	NA	False	NA	NA	False	NA	NA	NA	98010494	97999876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_98002338_98010274
tx.24787	chr7	-	5582	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-77	-568	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	20.3478067859224	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGAACTGTATATAC	3425	False	NA	NA	False	NA	NA	NA	98306067	98238710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
tx.24788	chr7	-	7598	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	19.8412383808176	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGAATTTTAAAGACT	3482	False	NA	NA	False	NA	NA	NA	98306010	98236345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
tx.24789	chr7	-	5423	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-60	-571	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	22.5753197480876	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATGTTGAACTGTATA	3442	False	NA	NA	False	NA	NA	NA	98306050	98238713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98297011_98297112_98303950_98304060_98305680
tx.2479	chr11	+	1379	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	188	1	188	-1	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTATCTGTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	22462275	22469233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
tx.24790	chr7	+	4360	6	NIC	ENSMUSG00000030753.16	novel	1123	6	NA	NA	24	508	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	94.1118483507789	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTGTTAGAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	98352333	98367777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362161_98364188
tx.24791	chr7	-	1744	5	ISM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	5874	0	5849	0	3prime_fragment	FALSE	canonical	3	105	junction_3	4.43705983732471	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	98881952	98868290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664
tx.24793	chr7	+	910	2	FSM	ENSMUSG00000044881.8	ENSMUST00000120454.3	742	2	-134	-34	-2	34	multi-exon	FALSE	canonical	2	17	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTGCCTCTATCTTTCC	7569	False	NA	NA	False	NA	NA	NA	100186304	100189020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100186473_100188278
tx.24794	chr7	-	929	8	NIC	ENSMUSG00000030706.18	novel	4285	8	NA	NA	-46	116	combination_of_known_junctions	FALSE	canonical	1	13	junction_7	166.611487464406	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	100256891	100198327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100256764
tx.24795	chr7	-	4987	29	FSM	ENSMUSG00000032737.14	ENSMUST00000035836.14	4995	29	-19	27	-19	-6	multi-exon	FALSE	canonical	3	20	junction_28	32.2947996066341	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAATAAAGGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	101487455	101471865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487095
tx.24796	chr7	+	3108	5	FSM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	-93	-2365	-17	0	multi-exon	FALSE	canonical	3	48	junction_1	224.489420686143	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAACTTGGTCCAGACT	7732	False	NA	NA	False	NA	NA	NA	101545529	101551052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106_101548245_101548400
tx.24797	chr7	+	2047	5	FSM	ENSMUSG00000030649.19	ENSMUST00000178851.2	2797	5	-1348	2098	19	1	multi-exon	FALSE	canonical	3	447	junction_4	71.736932607967	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTATTCCCTGTTT	7856	False	NA	NA	False	NA	NA	NA	101545653	101548748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
tx.24798	chr7	+	1761	4	ISM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	445	-65	-2	1	3prime_fragment	FALSE	canonical	3	447	junction_3	70.9005563369491	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	8270	False	NA	NA	False	NA	NA	NA	101546067	101548752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_101547279_101547760_101547821_101548106_101548245_101548400
tx.24799	chr7	-	1693	4	NIC	ENSMUSG00000064307.14	novel	821	5	NA	NA	11	628	intron_retention	FALSE	canonical	2	8	junction_3	3.09120616516523	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATTTCCTAGCTGGG	2509	False	NA	NA	False	NA	NA	NA	101583091	101561562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_101562791_101564768_101564975_101569843_101569982_101582970
tx.248	chr1	-	5124	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	508	0	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_10	105.535823301853	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	436	False	NA	NA	False	NA	NA	NA	46892698	46846703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46880907_46881042_46892630
tx.2480	chr11	-	2695	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	367	-5	-189	5	multi-exon	FALSE	canonical	3	288	junction_1	0	456	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATAAGTGATACTCTTT	4336	False	NA	NA	False	NA	NA	NA	22809734	22784741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_22787196_22809493
tx.24800	chr7	+	2633	7	ISM	ENSMUSG00000099481.7	ENSMUST00000094130.4	2298	11	-253	2763	-6	23	intron_retention	FALSE	canonical	3	50	junction_1	21.6544837543329	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGACAGAGAAGATA	NA	False	NA	NA	False	NA	NA	NA	101714711	101729525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939
tx.24801	chr7	+	4640	6	FSM	ENSMUSG00000030897.6	ENSMUST00000033187.6	2484	6	-7	-2149	-7	2149	multi-exon	FALSE	canonical	1	1	junction_2	2.13541565040626	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTATATTTATTTAC	NA	False	NA	NA	False	NA	NA	NA	105053767	105060098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_105053961_105054095_105054198_105054376_105054484_105054688_105055335_105056007_105056358_105056856
tx.24802	chr7	+	3726	8	ISM	ENSMUSG00000110234.3	ENSMUST00000142363.8	1972	9	-122	-6	-112	6	intron_retention	FALSE	canonical	1	3	junction_3	167.447097951099	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	105289646	105308255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_105289830_105289968_105290065_105290234_105290436_105300278_105300479_105300708_105301514_105304828_105304991_105306093_105306298_105306380
tx.24803	chr7	-	4007	4	FSM	ENSMUSG00000043866.12	ENSMUST00000131683.8	601	4	95	-3501	95	-2	multi-exon	FALSE	canonical	3	1257	junction_1	50.2084543567006	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCATCCCCTAAGGAC	6813	False	NA	NA	False	NA	NA	NA	105393194	105388601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036
tx.24804	chr7	-	154	2	Intergenic	novelGene_361	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCATCATCAGGCTATG	NA	False	NA	NA	False	NA	NA	NA	106584601	106584368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_106584465_106584543
tx.24805	chr7	+	3800	10	ISM	ENSMUSG00000016626.11	ENSMUST00000084763.5	3272	11	-61	-8	-61	-1	intron_retention	FALSE	canonical	2	8	junction_7	2.19988776369148	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTGTCATGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	106766135	106797308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_106766289_106780365_106780453_106780877_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353
tx.24806	chr7	-	1348	10	NNC	ENSMUSG00000048065.9	novel	2772	9	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	9.77651506998175	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGGATATGTAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	107357239	107349162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
tx.24807	chr7	+	5816	12	NNC	ENSMUSG00000031028.15	novel	747	2	NA	NA	2755	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.49078868019691	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGTCCTTGGTTTT	7227	False	NA	NA	False	NA	NA	NA	108619503	108633666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_108619638_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
tx.24809	chr7	-	2199	13	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51232	10	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	19.7188573029304	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGTGTCCTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	108986792	108878419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108939575_108939687_108940495_108940847_108986659
tx.2481	chr11	-	2728	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	-5	-121	-5	3	multi-exon	FALSE	canonical	3	85	junction_1	0	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTATAATAAGTGATACTCT	3577	False	NA	NA	False	NA	NA	NA	22810493	22784743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_22787196_22810217
tx.24810	chr7	+	1618	2	NIC	ENSMUSG00000046364.15	novel	760	4	NA	NA	0	5	intron_retention	FALSE	canonical	3	12965	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTGCATCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	109118402	109120978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_109119850_109120807
tx.24811	chr7	-	3953	8	FSM	ENSMUSG00000034825.15	ENSMUST00000041460.13	3927	8	-26	0	-26	0	multi-exon	FALSE	canonical	1	2	junction_7	5.70356136505061	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTGAGTCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	109381258	109357261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_109360397_109360853_109360949_109361027_109361081_109362690_109362831_109364672_109364756_109365679_109365842_109380506_109380668_109381134
tx.24812	chr7	-	7074	40	NIC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	4	-1	combination_of_known_junctions	TRUE	canonical	3	22	junction_39	19.8558248483317	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	110214117	109907220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159551_110213913
tx.24813	chr7	+	1392	4	FSM	ENSMUSG00000030790.16	ENSMUST00000033054.10	1390	4	-2	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCGGTTCATGCAT	5111	False	NA	NA	False	NA	NA	NA	110226865	110229027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_110227029_110227463_110227584_110227731_110227882_110228068
tx.24814	chr7	+	3921	15	NNC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	-21	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	17.6866143320482	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACCCAATAGAACAAATGT	NA	False	NA	NA	False	NA	NA	NA	110367391	110411599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110407048_110407161_110409002_110409114_110409940
tx.24815	chr7	-	1512	2	Antisense	novelGene_ENSMUSG00000055116.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCCCCTTTCTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	112861955	112858842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_-_112860287_112861887
tx.24816	chr7	+	5294	16	NNC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	-81	-1309	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	17.7531217912043	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCGTTTATATAATCCAG	NA	False	NA	NA	False	NA	NA	NA	114014434	114137177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097236_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
tx.24817	chr7	+	7348	4	NIC	ENSMUSG00000030663.13	novel	1479	5	NA	NA	5	0	intron_retention	FALSE	canonical	3	1664	junction_1	43.2537731173696	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	115692580	115704445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_115698759_115701178_115701240_115702445_115702556_115703446
tx.24818	chr7	-	5006	25	ISM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	305	29	-21	-29	3prime_fragment	FALSE	canonical	3	186	junction_4	27.274803950818	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	NA	False	NA	NA	NA	115907306	115722756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159
tx.24819	chr7	-	194	2	Intergenic	novelGene_363	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTGCTTGGTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	115962483	115935238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_115935259_115962309
tx.2482	chr11	-	774	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	124	3610	-6	13	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	528	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCTCTCAAAGTCCAA	NA	False	NA	NA	False	NA	NA	NA	22932258	22849745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_22850058_22906410_22906693_22932078
tx.24820	chr7	-	6662	30	ISM	ENSMUSG00000030660.10	ENSMUST00000170430.3	8044	33	49090	4	-26169	-4	3prime_fragment	TRUE	canonical	3	53	junction_14	13.2690981425733	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTGGCTGTCATTTCC	1536	False	NA	NA	False	NA	NA	NA	115993594	115936503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435
tx.24821	chr7	-	8019	34	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_31	19.6591244817837	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATAAAGGAACTTGGCT	NA	False	NA	NA	False	NA	NA	NA	116042683	115936512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016786_116017817_116041825_116041914_116042538
tx.24822	chr7	+	1522	13	NIC	ENSMUSG00000030659.15	novel	1685	14	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	13.8283123417944	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACACGTTTTTATCTTTT	NA	False	NA	NA	False	NA	NA	NA	116103597	116139821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_116103720_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
tx.24823	chr7	+	3323	8	NNC	ENSMUSG00000030924.17	novel	527	3	NA	NA	3749	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	7.48058712090631	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTCCTCTTAGATGT	NA	False	NA	NA	False	NA	NA	NA	119428522	119448166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_119430774_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119443481_119443670_119444605_119444725_119447954
tx.24824	chr7	-	2052	2	FSM	ENSMUSG00000097343.3	ENSMUST00000180977.3	1812	2	52	-292	2	-7	multi-exon	FALSE	canonical	2	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGCACTGGTTGGCC	NA	False	NA	NA	False	NA	NA	NA	120276741	120272665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_120274500_120276523
tx.24825	chr7	+	2265	3	NNC	ENSMUSG00000046096.8	novel	4831	3	NA	NA	-30	0	intron_retention	FALSE	canonical	3	9	junction_2	91	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	120276810	120333494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_120277094_120325342_120325556_120331725
tx.24826	chr7	+	2305	4	NIC	ENSMUSG00000046096.8	novel	345	4	NA	NA	-21	-12	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	72.8758457164573	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACTAAAAAGGCTTCTA	NA	False	NA	NA	False	NA	NA	NA	120276819	120333482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_120276936_120277012_120277094_120325342_120325556_120331587
tx.24827	chr7	+	747	3	ISM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-73	3815	-11	-2	5prime_fragment	FALSE	canonical	3	73	junction_1	59	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTGAAGGCAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	120276829	120325902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_120276936_120277012_120277094_120325342
tx.24828	chr7	-	4741	4	FSM	ENSMUSG00000044702.14	ENSMUST00000130149.3	3216	4	-17	-1508	10	1508	multi-exon	FALSE	canonical	3	129	junction_1	6.34209919681348	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCTTGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	121732159	121723296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_121727667_121728145_121728240_121728896_121728957_121731942
tx.24829	chr7	+	6843	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-19	15	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_13	36.0297608553927	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723380	122793225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
tx.2483	chr11	+	1934	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	107	443	0	186	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	4825	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	22940625	22953337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
tx.24830	chr7	-	7980	7	FSM	ENSMUSG00000030757.14	ENSMUST00000042470.14	7831	7	-151	2	-151	-2	multi-exon	FALSE	canonical	1	4	junction_1	4.54606056566195	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAAGGATGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	123099823	123074608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_123079996_123084162_123084655_123088801_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
tx.24831	chr7	+	3618	11	FSM	ENSMUSG00000030748.10	ENSMUST00000033004.8	5256	11	130	1508	-21	-1	multi-exon	TRUE	canonical	0	0	junction_6	3.9	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTCCTTTACTATACA	NA	False	NA	NA	False	NA	NA	NA	125151421	125177138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_125151501_125163723_125163900_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
tx.24832	chr7	-	3467	5	ISM	ENSMUSG00000032777.10	ENSMUST00000205659.2	6570	36	60208	0	2508	0	intron_retention	FALSE	canonical	3	227	junction_2	28.661821295933	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGTATTGGCCTAATG	NA	False	NA	NA	False	NA	NA	NA	125246641	125240125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686
tx.24833	chr7	+	3179	13	ISM	ENSMUSG00000032743.16	ENSMUST00000205462.2	4185	15	20964	-1	-10051	1	3prime_fragment	FALSE	canonical	3	12	junction_7	4.85555237731907	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGGTACACTGGATG	5130	False	NA	NA	False	NA	NA	NA	125449802	125473966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
tx.24834	chr7	+	2482	11	NNC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	-2	7	intron_retention	FALSE	non_canonical	0	0	junction_9	57.8782342508823	6	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGCCTGCAAGCCCC	NA	False	NA	NA	False	NA	NA	NA	126028235	126045080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043490_126043694_126044109_126044468
tx.24835	chr7	+	1120	10	FSM	ENSMUSG00000030703.9	ENSMUST00000032944.9	1148	10	28	0	28	0	multi-exon	TRUE	canonical	1	3	junction_3	2.43938871112224	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTCATGGAACAAGGG	NA	False	NA	NA	False	NA	NA	NA	126365533	126374817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126365782_126366073_126366117_126366346_126366483_126366562_126366609_126366738_126366858_126366934_126367025_126367741_126367876_126370159_126370220_126370333_126370386_126374625
tx.24836	chr7	+	1494	2	FSM	ENSMUSG00000042606.10	ENSMUST00000146120.2	431	2	-855	-208	-282	208	multi-exon	FALSE	canonical	3	266	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	3065	False	NA	NA	False	NA	NA	NA	126462732	126464298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126463834_126463905
tx.24837	chr7	-	2089	4	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	2	980	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	9.62635271879577	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAGCATAAAGCACAGT	6920	False	NA	NA	False	NA	NA	NA	127021204	127017158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_127018814_127019181_127019278_127020576_127020691_127020980
tx.24838	chr7	-	2723	2	FSM	ENSMUSG00000045251.14	ENSMUST00000135886.2	2732	2	11	-2	11	0	multi-exon	FALSE	canonical	3	55	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6895	False	NA	NA	False	NA	NA	NA	127021229	127018138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127018814_127019181
tx.24839	chr7	+	2818	8	FSM	ENSMUSG00000053877.13	ENSMUST00000185401.7	2904	8	24	62	5	-62	multi-exon	FALSE	canonical	3	43	junction_5	6.55588223176215	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTGGTCTGTATGTTC	NA	False	NA	NA	False	NA	NA	NA	127111178	127126150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802
tx.2484	chr11	+	2116	6	NIC	ENSMUSG00000049811.18	novel	1947	5	NA	NA	-15	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.81175454637056	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGTACCTCAAGACATT	NA	False	NA	NA	False	NA	NA	NA	22958449	22973727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_22958627_22963538_22963648_22965654_22965885_22969999_22971134_22971493_22971662_22973429
tx.24840	chr7	-	6291	5	FSM	ENSMUSG00000030814.18	ENSMUST00000206200.2	479	5	-323	-5489	0	-7	multi-exon	FALSE	canonical	2	5	junction_4	255.328587314464	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTTGGGTCTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	127307957	127260634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307607
tx.24841	chr7	+	3627	10	FSM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	-178	0	-51	0	multi-exon	FALSE	canonical	3	25	junction_5	29.4282974593846	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	2854	False	NA	NA	False	NA	NA	NA	127347267	127368655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
tx.24842	chr7	-	1895	5	NNC	ENSMUSG00000030800.11	novel	1852	6	NA	NA	-36	-1	intron_retention	FALSE	canonical	0	0	junction_4	13.1244047484067	14	4	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTACACATATTTACA	NA	False	NA	NA	False	NA	NA	NA	127529312	127524888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528943
tx.24843	chr7	-	2632	2	ISM	ENSMUSG00000070371.12	ENSMUST00000152697.3	1052	5	-6	0	-6	0	intron_retention	FALSE	canonical	3	106	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	NA	NA	NA	127534697	127531809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_127532287_127532542
tx.24844	chr7	+	2593	5	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	742	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	39.1942278913618	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTGTGGGGTCGTC	NA	False	NA	NA	False	NA	NA	NA	127837270	127844270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127837762_127839053_127839162_127839254_127840042_127842511_127842645_127843196
tx.24845	chr7	+	2600	5	ISM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	2524	2	2524	-2	3prime_fragment	FALSE	canonical	3	92	junction_2	3.76662979332984	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTGTGGGGTCGTC	NA	False	NA	NA	False	NA	NA	NA	127839052	127844270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
tx.24846	chr7	-	4414	12	FSM	ENSMUSG00000030846.16	ENSMUST00000106226.9	4451	12	35	2	15	-2	multi-exon	FALSE	canonical	3	18	junction_10	64.264304450031	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTTTCTCTTAGTGT	NA	False	NA	NA	False	NA	NA	NA	128063361	128041502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
tx.24847	chr7	-	2699	11	FSM	ENSMUSG00000030846.16	ENSMUST00000141079.8	4266	11	14	1553	14	17	multi-exon	FALSE	canonical	3	163	junction_6	28.929051142407	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGTTTAAATGATAAACA	NA	False	NA	NA	False	NA	NA	NA	128063362	128043501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
tx.24848	chr7	+	4505	19	NIC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	15.9764487161649	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCAGCGTATGAGAA	7178	False	NA	NA	False	NA	NA	NA	128213085	128297994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128293475_128293550_128293977_128294107_128295368_128295457_128295899
tx.24849	chr7	-	4900	12	FSM	ENSMUSG00000030850.18	ENSMUST00000178534.8	1530	12	-305	-3065	103	0	multi-exon	FALSE	canonical	3	22	junction_11	65.693629010445	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	130121996	129993222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121606
tx.2485	chr11	+	2028	5	NIC	ENSMUSG00000049811.18	novel	1947	5	NA	NA	-29	3	combination_of_known_splicesites	TRUE	canonical	3	12	junction_4	2.95803989154981	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCAAGACATTCCTGACA	NA	False	NA	NA	False	NA	NA	NA	22958435	22973734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_22958627_22965654_22965885_22969999_22971134_22971493_22971662_22973429
tx.24850	chr7	+	3590	13	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-19	-5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	70.6286749289708	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	130467595	130515037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511282_130511359_130512561
tx.24851	chr7	+	3499	4	FSM	ENSMUSG00000063179.14	ENSMUST00000124672.8	1615	4	-1878	-6	0	0	multi-exon	FALSE	canonical	3	189	junction_2	16.6799946709291	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	NA	False	NA	NA	NA	130972885	130989568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_130975993_130985653_130985730_130986228_130986323_130989346
tx.24852	chr7	+	2236	9	NIC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	61	535	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	38.7699545395658	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTAGTTCCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	132532931	132586260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_132533275_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
tx.24853	chr7	-	2046	9	FSM	ENSMUSG00000030979.14	ENSMUST00000135760.8	2189	9	31	112	-4	1	multi-exon	FALSE	canonical	3	35	junction_8	13.9821314541096	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCTGAGTATGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	133310792	133288083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_133288846_133291310_133291410_133292236_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
tx.24854	chr7	+	1975	11	FSM	ENSMUSG00000053111.14	ENSMUST00000065359.12	2004	11	22	7	-8	-7	multi-exon	FALSE	canonical	1	2	junction_1	2.56904651573303	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCTCACAGGAGTGG	NA	False	NA	NA	False	NA	NA	NA	133378611	133483254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_133378700_133454894_133455073_133463831_133463957_133469846_133469929_133471006_133471082_133471750_133471817_133478476_133478643_133481607_133481752_133482000_133482079_133482172_133482218_133482326
tx.24855	chr7	+	996	6	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-25	-2080	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	98.1150345258055	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGATGTGGCTGCCCTT	NA	False	NA	NA	False	NA	NA	NA	136496317	136729915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_136496417_136521584_136521742_136552996_136553134_136687677_136687839_136723217_136723358_136729613
tx.24856	chr7	+	1625	2	ISM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	6844	714	6839	100	3prime_fragment	FALSE	canonical	3	49	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTGCACCTGCCTGAC	340	False	NA	NA	False	NA	NA	NA	138835241	138847177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_138836077_138846387
tx.24857	chr7	+	2785	16	FSM	ENSMUSG00000025477.15	ENSMUST00000026550.14	2774	16	-17	6	-16	-6	multi-exon	FALSE	canonical	3	14	junction_15	41.2685513839938	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCCTGCTGCTTA	NA	False	NA	NA	False	NA	NA	NA	138969008	139159562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158135_139158269
tx.24858	chr7	-	1386	12	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	47.3902385596844	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	140367754	140357141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140367648
tx.24859	chr7	-	1399	13	NNC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_12	46.3269629913294	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	140367758	140357141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367702
tx.2486	chr11	+	4817	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-50	1237	-13	-585	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2620	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	NA	False	NA	NA	NA	23206027	23247012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
tx.24860	chr7	+	6051	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-85	-2	intron_retention	FALSE	canonical	3	132	junction_13	21.5715862498179	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTCTGTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	140640931	140652311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
tx.24861	chr7	-	1971	9	FSM	ENSMUSG00000025494.9	ENSMUST00000210167.2	1897	9	-74	0	-26	0	multi-exon	FALSE	canonical	3	23	junction_8	41.6921380478382	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	140680511	140671087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
tx.24862	chr7	-	3190	4	NIC	ENSMUSG00000025499.19	novel	1199	5	NA	NA	-23	-4	intron_retention	FALSE	canonical	3	437	junction_1	85.8888170187999	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGTATCTCTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	140773941	140769021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_140771381_140772043_140772534_140772742_140772895_140773752
tx.24863	chr7	-	1113	6	NIC	ENSMUSG00000025499.19	novel	1199	5	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	225.486496269732	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	140773946	140770838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_140771141_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
tx.24864	chr7	+	2247	13	NNC	ENSMUSG00000038637.16	novel	2197	13	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.90920701180312	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCCTGGCTGACCTA	1310	False	NA	NA	False	NA	NA	NA	140774982	140789968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_140775130_140775820_140775926_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
tx.24865	chr7	-	3678	13	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1595	2	intron_retention	TRUE	canonical	2	7	junction_7	3.17433282579015	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGAGTTGAAAATGATT	NA	False	NA	NA	False	NA	NA	NA	140795588	140789902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_140790118_140790193_140790444_140790603_140790801_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140792398_140792498_140792571_140792838_140792995_140793114_140793203_140793546_140793700_140793786_140793991_140794347
tx.24866	chr7	+	1349	4	FSM	ENSMUSG00000025496.6	ENSMUST00000026569.6	2799	4	-54	1504	-54	867	multi-exon	FALSE	canonical	1	2	junction_1	1.4142135623731	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGGCTGGGGGTTGGG	NA	False	NA	NA	False	NA	NA	NA	140871864	140874873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_140872227_140873625_140873739_140873825_140874398_140874571
tx.24867	chr7	-	2623	9	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-9	0	intron_retention	TRUE	canonical	3	72	junction_8	22.1412369798979	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	497	False	NA	NA	False	NA	NA	NA	141017515	141009661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
tx.24868	chr7	-	3166	8	NIC	ENSMUSG00000019082.19	novel	3264	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	72	junction_7	23.6246153191876	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	477	False	NA	NA	False	NA	NA	NA	141017535	141009661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
tx.24869	chr7	+	2203	2	FSM	ENSMUSG00000025508.14	ENSMUST00000134636.2	399	2	-1807	3	1165	-3	multi-exon	FALSE	canonical	3	11523	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTGGCCTTTAAACATT	3762	False	NA	NA	False	NA	NA	NA	141028927	141031259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_141031016_141031144
tx.2487	chr11	+	11412	79	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-67	-3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	28.4435754125342	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	254	False	NA	NA	False	NA	NA	NA	23256827	23439741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
tx.24870	chr7	-	1467	5	FSM	ENSMUSG00000025147.8	ENSMUST00000210684.2	958	5	12	-521	-4	23	multi-exon	FALSE	canonical	2	4	junction_3	69.7006994226026	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTCCTTGTGGTTCCTG	NA	False	NA	NA	False	NA	NA	NA	141614790	141562248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570130_141570243_141614721
tx.24871	chr7	-	1661	4	NIC	ENSMUSG00000025147.8	novel	1646	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	151	junction_1	10.2089285540757	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCCATTTCATATTATT	NA	False	NA	NA	False	NA	NA	NA	141614786	141562271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_141563316_141563989_141564115_141569815_141570243_141614721
tx.24872	chr7	-	737	2	FSM	ENSMUSG00000010760.6	ENSMUST00000010904.5	757	2	17	3	17	-3	multi-exon	FALSE	canonical	3	98	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGTGTGGTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	143056261	143055284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143055554_143055793
tx.24873	chr7	+	1897	3	FSM	ENSMUSG00000031073.7	ENSMUST00000033389.7	1810	3	-87	0	-87	0	multi-exon	FALSE	canonical	2	3	junction_2	1.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTGTTCTATTCCAAG	NA	False	NA	NA	False	NA	NA	NA	144450180	144454690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_144450669_144450852_144450957_144453385
tx.24874	chr7	-	2645	4	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	1797	691	125	-691	3prime_fragment	FALSE	canonical	3	335	junction_3	31.1804782231162	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTCCTGTTCACAATAC	NA	False	NA	NA	False	NA	NA	NA	144491809	144484358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623
tx.24875	chr8	+	3919	19	FSM	ENSMUSG00000011832.17	ENSMUST00000176825.3	3728	19	-191	0	-19	0	multi-exon	FALSE	canonical	3	9	junction_13	6.86285402963656	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	NA	False	NA	NA	NA	4216547	4258046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
tx.24876	chr8	-	1649	5	NNC	ENSMUSG00000040459.12	novel	970	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	382.237491620066	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5247	False	NA	NA	False	NA	NA	NA	8740529	8716575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976_8740111_8740165
tx.24877	chr8	-	3945	22	ISM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	91734	96	-3823	-88	3prime_fragment	FALSE	canonical	3	52	junction_19	8.06267962411309	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTTTTATGGATTTGT	8582	False	NA	NA	False	NA	NA	NA	11271092	11248518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981
tx.24878	chr8	-	5573	40	ISM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	71639	101	-39	-93	3prime_fragment	FALSE	canonical	3	34	junction_31	10.6250420581602	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAAGCTTTTATGGA	NA	False	NA	NA	False	NA	NA	NA	11291187	11248523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121
tx.2488	chr11	+	9721	61	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	14	-3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	28.0282149508907	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGGCGAATGATACATC	356	False	NA	NA	False	NA	NA	NA	23256929	23406683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524
tx.24880	chr8	-	1461	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	57	-126	57	126	multi-exon	FALSE	canonical	1	4	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTCTCTCTTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	11528653	11503391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_11504527_11528327
tx.24881	chr8	+	3817	26	ISM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	-159	11437	-159	21	5prime_fragment	FALSE	canonical	3	50	junction_9	10.4079969254415	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTTTATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	12806854	12907291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933
tx.24882	chr8	+	3843	25	ISM	ENSMUSG00000031441.16	ENSMUST00000091237.12	7443	29	21	16990	21	14	5prime_fragment	FALSE	canonical	3	50	junction_9	10.6092203085597	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTCTGTGTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	12807036	12901738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036
tx.24883	chr8	+	5140	31	NIC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_30	7.40577852460871	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCTGGTTATGTGTTA	8007	False	NA	NA	False	NA	NA	NA	12923929	13070509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695_13068800_13068938
tx.24884	chr8	+	5080	29	ISM	ENSMUSG00000031442.22	ENSMUST00000110879.9	3664	30	-86	-1191	-4	-1	intron_retention	FALSE	canonical	2	4	junction_1	7.42548012602827	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGTAGCATTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	12965888	13070500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_12966055_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
tx.24885	chr8	+	4521	4	ISM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	-287	-569	-287	537	intron_retention	FALSE	canonical	3	38	junction_3	9.41629792788369	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATACGCTTTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	13337902	13348186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845
tx.24886	chr8	+	1502	8	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	345	472	315	-472	3prime_fragment	FALSE	canonical	3	271	junction_5	39.9571198733271	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCAGGTTTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	13835959	13848721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
tx.24887	chr8	+	3989	2	FSM	ENSMUSG00000047710.9	ENSMUST00000128557.3	3977	2	-16	4	-16	-4	multi-exon	FALSE	canonical	2	6	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTTCATGTGTACTTA	NA	False	NA	NA	False	NA	NA	NA	13919687	13931635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_13919839_13927797
tx.24888	chr8	-	3140	3	ISM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-11	4	2	-4	intron_retention	FALSE	canonical	0	0	junction_2	328.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTAGTATGCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	13940279	13934797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_13935202_13935665_13935882_13937759
tx.24889	chr8	-	1284	3	NIC	ENSMUSG00000031458.9	novel	793	4	NA	NA	-22	-8	intron_retention	FALSE	canonical	0	0	junction_1	324	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCACCTAGTATGCTC	NA	False	NA	NA	False	NA	NA	NA	13940303	13934801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_13935882_13937759_13937827_13940166
tx.2489	chr11	-	1776	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	58	1189	-42	-153	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	23447972	23439735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
tx.24890	chr8	+	2025	10	NIC	ENSMUSG00000038365.9	novel	2012	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_7	29.6514734295483	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTCTGCAACAAT	NA	False	NA	NA	False	NA	NA	NA	13957786	13990522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981184_13981365_13985145_13985290_13989562
tx.24891	chr8	+	3399	6	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21102	9475	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	12.4354332453679	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGAAGTTTCTTCA	5287	False	NA	NA	False	NA	NA	NA	20555597	20593812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_20555835_20576529_20576922_20584150_20584338_20588008_20588273_20590632_20590713_20591573
tx.24892	chr8	+	1112	4	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21096	3973	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	4.49691252107735	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCTGTTAACAACAGT	5293	False	NA	NA	False	NA	NA	NA	20555603	20588310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_20555835_20576529_20576922_20584150_20584338_20588008
tx.24893	chr8	+	7407	6	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-15426	314	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	222.87790379488	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCATTCAAAGTTAGGGC	7786	False	NA	NA	False	NA	NA	NA	21092186	21123101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_21097926_21107448_21107655_21112754_21113054_21116684_21116805_21118696_21119267_21122628
tx.24894	chr8	+	3143	2	FSM	ENSMUSG00000074442.5	ENSMUST00000098896.5	377	2	-2720	-46	-2720	46	multi-exon	FALSE	canonical	3	20	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGATCTGTATATAAAGTA	NA	False	NA	NA	False	NA	NA	NA	21678909	21682611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_21681802_21682360
tx.24895	chr8	+	3470	13	NIC	ENSMUSG00000031479.10	novel	3574	14	NA	NA	27	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	113.361607992595	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAATGTGGGAATTTT	NA	False	NA	NA	False	NA	NA	NA	22682851	22710851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_22682983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
tx.24896	chr8	-	3413	9	FSM	ENSMUSG00000031539.7	ENSMUST00000163739.3	3417	9	4	0	2	0	multi-exon	FALSE	canonical	0	0	junction_8	7.29618907375624	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	23295616	23277369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295529
tx.24897	chr8	-	6845	2	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTTTCTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	23656923	23648970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_23655721_23656828
tx.24898	chr8	-	2846	8	NNC	ENSMUSG00000031549.17	novel	3205	9	NA	NA	-47	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	2.25876975726313	8	1	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTAGCTCAAAGTCTT	8185	False	NA	NA	False	NA	NA	NA	25044660	25021907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037259_25040770_25040904_25043736_25043857_25044550
tx.24899	chr8	-	6739	11	ISM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	19122	2	-14887	-2	3prime_fragment	FALSE	canonical	3	32	junction_10	16.0062487797735	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCGGGGTGTGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	25672436	25644569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838
tx.249	chr1	-	4992	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	506	0	506	0	multi-exon	FALSE	canonical	3	237	junction_4	21.0736509753792	603	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	434	False	NA	NA	False	NA	NA	NA	46892700	46846703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
tx.2490	chr11	-	4158	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	-23	-7	-15	7	multi-exon	TRUE	canonical	3	83	junction_12	9.91208520476776	217	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	NA	False	NA	NA	NA	23583654	23523780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
tx.24900	chr8	+	6580	7	NIC	ENSMUSG00000054823.18	novel	3818	8	NA	NA	-28	-39	intron_retention	FALSE	canonical	3	91	junction_5	10.5619863451699	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAAAAAATT	9657	False	NA	NA	False	NA	NA	NA	26092271	26164893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26156173_26163349
tx.24901	chr8	+	2958	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	2	2	2	-2	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCACTGTCGCAGACTC	NA	False	NA	NA	False	NA	NA	NA	31677361	31727820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
tx.24902	chr8	+	2304	4	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-683	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	3.55902608401044	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGGATTCTTATTTT	NA	False	NA	NA	False	NA	NA	NA	33875669	33907497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_33876092_33876357_33877237_33879196_33879287_33906584
tx.24903	chr8	+	5728	2	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-677	4253	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTTTGAAGAGGATGAAA	NA	False	NA	NA	False	NA	NA	NA	33875675	33881669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_33876092_33876357
tx.24904	chr8	+	2086	3	NNC	ENSMUSG00000071113.5	novel	1836	3	NA	NA	4130	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGTGGCCGTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	34586313	34592336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_34586766_34587223_34587430_34590908
tx.24905	chr8	+	4921	6	NNC	ENSMUSG00000050271.13	novel	4780	6	NA	NA	-127	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	10.2878569196893	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTAATTTGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	36561854	36614936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_36562143_36566704_36567142_36569709_36571506_36596157_36596316_36606505_36607267_36613455
tx.24906	chr8	+	3219	4	ISM	ENSMUSG00000050271.13	ENSMUST00000110492.2	4780	6	8708	2	8675	-2	3prime_fragment	FALSE	canonical	3	28	junction_3	3.29983164553722	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAATTTGTTTTTATTGC	NA	False	NA	NA	False	NA	NA	NA	36570689	36614939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_36571506_36596157_36596316_36606505_36607267_36613455
tx.24907	chr8	+	2460	6	NIC	ENSMUSG00000039620.18	novel	2573	7	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	1.6	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTAGACCTCTGTGGAA	NA	False	NA	NA	False	NA	NA	NA	36924783	36980167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_36925046_36925311_36925538_36956197_36956400_36965480_36965636_36972705_36972880_36978726
tx.24908	chr8	+	1387	12	ISM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	-22	10914	-22	8621	5prime_fragment	FALSE	canonical	3	62	junction_3	9.14980919278991	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTGATTTTATTGTT	1198	False	NA	NA	False	NA	NA	NA	40876833	40927852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775
tx.24909	chr8	-	7119	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-29	-364	intron_retention	FALSE	canonical	3	90	junction_12	16.4738850575354	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAGCCTCTGACATA	NA	False	NA	NA	False	NA	NA	NA	41586792	41444452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
tx.2491	chr11	-	3039	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	73	1034	-34	-1034	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	452	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGGGTCTTTATTGTT	NA	False	NA	NA	False	NA	NA	NA	23615886	23597512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
tx.24910	chr8	-	7340	12	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-2065	-3	intron_retention	FALSE	canonical	3	91	junction_9	15.7033449087229	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGAATCTTGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	41537878	41443957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650
tx.24911	chr8	+	5586	2	NIC	ENSMUSG00000091490.4	novel	1467	7	NA	NA	420	3	intron_retention	FALSE	canonical	3	562	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	NA	False	NA	NA	NA	43638502	43646921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_43643407_43646239
tx.24912	chr8	+	2643	2	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTGCATGCATTC	NA	False	NA	NA	False	NA	NA	NA	43859371	43862130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_+_43860638_43860753
tx.24913	chr8	-	974	3	FSM	ENSMUSG00000110231.2	ENSMUST00000209210.2	936	3	-31	-7	-31	7	multi-exon	FALSE	canonical	3	13	junction_1	4	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGACTCTTCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	45618287	45613523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_45614092_45614492_45614559_45617947
tx.24914	chr8	+	1616	11	FSM	ENSMUSG00000031634.14	ENSMUST00000130412.8	1613	11	0	-3	0	0	multi-exon	FALSE	canonical	3	163	junction_5	20.5873747719324	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGCTGTGATTTAAAAA	8866	False	NA	NA	False	NA	NA	NA	46428570	46449897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_46428626_46432245_46432333_46433351_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
tx.24915	chr8	+	2557	7	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	170	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	97.1129067975347	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	47070646	47092724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_47070814_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
tx.24916	chr8	-	5203	15	ISM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	115123	2124	115123	-2124	3prime_fragment	FALSE	canonical	3	197	junction_14	23.5476070104452	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATGTTGCTTATTCA	NA	False	NA	NA	False	NA	NA	NA	48328463	48279117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263
tx.24917	chr8	+	2111	8	NNC	ENSMUSG00000031520.7	novel	2449	7	NA	NA	-384	-645	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	18.4678429842198	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGAAGTTCAGTCTTTT	637	False	NA	NA	False	NA	NA	NA	54530256	54639486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_54530961_54609992_54610195_54612327_54612372_54612448_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
tx.24918	chr8	-	3439	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	423.496753234308	635	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTCCAGGTTTATGT	NA	False	NA	NA	False	NA	NA	NA	54983018	54973473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_54976431_54977975_54978092_54979485_54979555_54981374_54981451_54982797
tx.24919	chr8	+	6353	3	FSM	ENSMUSG00000031647.11	ENSMUST00000160719.8	6335	3	-27	9	6	-9	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGGTGTGTGTCATGTG	NA	False	NA	NA	False	NA	NA	NA	61085866	61129754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_61086093_61109493_61109924_61124057
tx.2492	chr11	+	3413	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	146	0	-35	0	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	23616152	23682876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
tx.24920	chr8	+	5245	35	NIC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	1	-2	combination_of_known_junctions	TRUE	canonical	3	4	junction_1	17.6755896814855	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATCAGTTGTCCTTA	NA	False	NA	NA	False	NA	NA	NA	61446229	61584378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_61446391_61446675_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
tx.24921	chr8	-	2869	9	NNC	ENSMUSG00000030465.20	novel	1049	5	NA	NA	-210	5220	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.661437827766148	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTGGAGTCAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	68515148	68351079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_68351568_68356768_68356828_68358910_68359024_68361137_68361219_68361334_68361542_68413038_68413432_68415940_68417007_68453368_68453478_68514795
tx.24922	chr8	+	2733	4	FSM	ENSMUSG00000091764.4	ENSMUST00000204285.3	4333	4	-1	1601	-1	1211	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTTGTAGTTTCATATA	NA	False	NA	NA	False	NA	NA	NA	70107140	70118031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70107247_70111912_70112040_70112223_70112285_70115592
tx.24923	chr8	-	5763	4	FSM	ENSMUSG00000043090.19	ENSMUST00000137573.2	3245	4	1	-2519	1	2	multi-exon	FALSE	canonical	3	29	junction_1	2.44948974278318	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACTTGTGTCAAATCC	6870	False	NA	NA	False	NA	NA	NA	70227560	70213973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70219428_70220282_70220344_70221770_70221898_70227439
tx.24924	chr8	+	1540	2	FSM	ENSMUSG00000031861.17	ENSMUST00000238452.2	1350	2	29	-219	29	219	multi-exon	FALSE	canonical	3	18	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGGTTGTTATTTTTG	518	False	NA	NA	False	NA	NA	NA	70275262	70277644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70275362_70276203
tx.24925	chr8	+	1158	7	NIC	ENSMUSG00000031860.18	novel	1560	8	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	12.3659478676997	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTGTTTTCAATACA	2235	False	NA	NA	False	NA	NA	NA	70285302	70324941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_70285502_70311729_70311804_70317473_70317665_70319117_70319254_70322678_70322833_70323227_70323335_70324644
tx.24926	chr8	+	3722	11	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	91	junction_1	40.4568906368248	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCAGTGTGGTCTGGCCC	5868	False	NA	NA	False	NA	NA	NA	70625056	70635517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
tx.24927	chr8	-	1947	8	NNC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	2	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.2389041187121	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTAATTTTAAAGCT	4687	False	NA	NA	False	NA	NA	NA	70687097	70672838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70687039
tx.24928	chr8	+	1278	2	FSM	ENSMUSG00000109523.2	ENSMUST00000207684.2	1349	2	57	14	57	-14	multi-exon	FALSE	canonical	3	32	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAAGTTCCATTGCG	5175	False	NA	NA	False	NA	NA	NA	70782523	70784223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70782927_70783348
tx.24929	chr8	+	2549	19	FSM	ENSMUSG00000031849.10	ENSMUST00000003659.9	2416	19	-134	1	-134	0	multi-exon	FALSE	canonical	0	0	junction_8	1.24225998749988	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGGCTTTGGTCGCT	NA	False	NA	NA	False	NA	NA	NA	70826073	70834715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70826298_70826502_70826589_70827022_70827075_70827454_70827625_70828379_70828518_70828691_70828767_70828846_70829006_70829087_70829193_70829285_70829394_70829746_70829907_70831263_70831383_70831547_70831601_70831683_70831866_70832043_70832223_70832330_70832380_70832754_70832952_70833894_70834068_70834321_70834462_70834535
tx.2493	chr11	+	3872	7	ISM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	49790	0	-1685	0	3prime_fragment	FALSE	canonical	3	114	junction_5	9.88264472024906	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	177	False	NA	NA	False	NA	NA	NA	23665796	23682876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
tx.24930	chr8	-	5617	13	NIC	ENSMUSG00000003575.14	novel	5683	14	NA	NA	-32	-3	intron_retention	FALSE	canonical	1	2	junction_9	19.1113331705445	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGGCCTCTTCCTCTTT	5181	False	NA	NA	False	NA	NA	NA	70892261	70835007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70857908_70857971_70858727_70858866_70861544_70861662_70892082
tx.24931	chr8	-	953	5	NNC	ENSMUSG00000003575.14	novel	870	4	NA	NA	-28	541	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	29.1247317584214	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAACTGCACACAGTGTG	5185	False	NA	NA	False	NA	NA	NA	70892257	70856957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_70857419_70857908_70857971_70858727_70858866_70861544_70861662_70892082
tx.24932	chr8	-	5495	2	NIC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	8	3	intron_retention	FALSE	canonical	3	54	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCAGACCTGTGCTCTA	NA	False	NA	NA	False	NA	NA	NA	70929610	70902914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70908299_70929499
tx.24933	chr8	+	634	4	ISM	ENSMUSG00000007888.16	ENSMUST00000008032.14	1644	9	7975	4	0	-4	3prime_fragment	FALSE	canonical	2	10	junction_2	1.24721912892465	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCAGTGTGTTTGGGGC	NA	False	NA	NA	False	NA	NA	NA	70953782	70956727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_70953929_70955954_70956143_70956246_70956290_70956470
tx.24934	chr8	-	4514	2	ISM	ENSMUSG00000056204.9	ENSMUST00000211526.2	805	4	4035	-4040	4035	0	3prime_fragment	FALSE	canonical	3	150	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	False	NA	NA	False	NA	NA	NA	71103994	71099084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71103436_71103831
tx.24935	chr8	+	1409	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	25	8	1	-8	multi-exon	FALSE	canonical	3	27	junction_1	12.8646803302686	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCCGCACCCTGCCC	NA	False	NA	NA	False	NA	NA	NA	71207352	71211315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
tx.24936	chr8	-	3047	15	ISM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	1370	2	-656	-2	3prime_fragment	TRUE	canonical	3	135	junction_8	20.0550263433548	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTGTCTTTGGGGACT	NA	False	NA	NA	False	NA	NA	NA	71227987	71220821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299
tx.24937	chr8	-	4455	19	ISM	ENSMUSG00000031833.11	ENSMUST00000211948.2	4251	26	4454	-1087	2795	0	3prime_fragment	TRUE	canonical	3	41	junction_1	7.88203927989937	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	NA	False	NA	NA	NA	71240627	71230760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511
tx.24938	chr8	-	5219	27	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_26	10.3378576975671	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	NA	False	NA	NA	NA	71257647	71230760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
tx.24939	chr8	-	5119	27	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-25	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	13.9510980246959	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGGTGTGTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	71257654	71230762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240879_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
tx.2494	chr11	-	4513	23	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	-8	2499	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	36.478483412364	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGATGTTTGAGTGATA	1261	False	NA	NA	False	NA	NA	NA	23845261	23810146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_23812196_23813936_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
tx.24940	chr8	+	3429	4	ISM	ENSMUSG00000000791.10	ENSMUST00000212657.2	2741	15	8371	-2117	3639	2117	3prime_fragment	FALSE	canonical	2	4	junction_3	2.05480466765633	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGGTGTTGTGCGGTGTTG	NA	False	NA	NA	False	NA	NA	NA	71269498	71276185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_71269684_71269855_71269991_71272325_71272408_71273158
tx.24941	chr8	-	2889	9	NIC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	30	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	8.14612638006556	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGATTCTGGTGAAACA	NA	False	NA	NA	False	NA	NA	NA	71309622	71295806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71297206_71299138_71299209_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
tx.24942	chr8	-	3155	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	49	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	9.4097401598845	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGATTCTGGTGAAACA	NA	False	NA	NA	False	NA	NA	NA	71315853	71295806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314341_71314418_71315591
tx.24943	chr8	-	3351	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-115	-6	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	7.6610285226392	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGATTCTGGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	71316017	71295807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
tx.24944	chr8	-	2866	9	NIC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	28	-5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	9.57862203033401	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGATTCTGGTGAAACA	NA	False	NA	NA	False	NA	NA	NA	71309624	71295806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
tx.24945	chr8	-	279	3	ISM	ENSMUSG00000045128.10	ENSMUST00000212709.2	700	5	1328	-4	1328	0	3prime_fragment	FALSE	canonical	3	32872	junction_2	746.5	809	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	NA	False	NA	NA	NA	71348599	71348022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71348152_71348243_71348354_71348559
tx.24946	chr8	-	2970	4	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_1	61.937244225282	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGCCTCTGCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	71834604	71826766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71828147_71828392_71828918_71831032_71831128_71833634
tx.24947	chr8	-	3472	4	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	-4	3	-4	-3	intron_retention	FALSE	canonical	3	51	junction_3	4.96655480858378	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCCTCCAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	71916303	71909351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889
tx.24948	chr8	-	1207	4	NIC	ENSMUSG00000007950.10	novel	1978	5	NA	NA	0	-11	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	26.7124606795322	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATCCAAACTGGCCTCC	NA	False	NA	NA	False	NA	NA	NA	71916266	71909359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_71910022_71910681_71910899_71911021_71911193_71916109
tx.24949	chr8	-	925	8	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	3.4166459266004	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGTTATATATAACAAG	NA	False	NA	NA	False	NA	NA	NA	72124384	72112987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
tx.2495	chr11	-	3754	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	-8	1	-8	-1	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	307	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCTGTCTTTAATTTTT	1261	False	NA	NA	False	NA	NA	NA	23845261	23812646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
tx.24950	chr8	-	1970	2	ISM	ENSMUSG00000074240.6	ENSMUST00000211946.2	2014	4	5400	1	5382	-1	3prime_fragment	FALSE	canonical	3	14	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGATCTCTGCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	72961281	72958179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_72958275_72959406
tx.24951	chr8	-	2920	22	FSM	ENSMUSG00000037148.9	ENSMUST00000210922.2	2208	22	-159	-553	11	0	multi-exon	FALSE	canonical	0	0	junction_2	8.01868566087306	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	78244571	77976994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_77977637_77983954_77984047_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
tx.24952	chr8	+	2734	12	FSM	ENSMUSG00000037134.18	ENSMUST00000210040.2	2688	12	-46	0	1	0	multi-exon	FALSE	canonical	3	14	junction_4	44.8630606944737	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	NA	False	NA	NA	NA	78276036	78307966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289077_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
tx.24953	chr8	-	1942	4	NIC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	42	-117	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	494.10997426349	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTAGTCTCCTCGTGGT	NA	False	NA	NA	False	NA	NA	NA	79547727	79533196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_79534875_79536575_79536690_79546615_79546715_79547676
tx.24954	chr8	+	7990	15	FSM	ENSMUSG00000071064.16	ENSMUST00000098614.9	7581	15	-386	-23	-386	0	multi-exon	TRUE	canonical	2	3	junction_2	2.87494454249973	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGCTTCTATTTCTT	4660	False	NA	NA	False	NA	NA	NA	79754679	79920395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
tx.24955	chr8	-	355	2	ISM	ENSMUSG00000037022.4	ENSMUST00000210231.2	1685	8	25502	-1	25502	1	3prime_fragment	FALSE	canonical	3	84	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGAGTTTCCCTGAG	NA	False	NA	NA	False	NA	NA	NA	79995807	79994535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_79994845_79995761
tx.24956	chr8	-	1358	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	-15	4307	-15	3	multi-exon	FALSE	canonical	3	29	junction_6	17.5214154679352	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGAGTTTCCCTGAGTG	NA	False	NA	NA	False	NA	NA	NA	80021581	79994533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
tx.24957	chr8	-	5484	6	ISM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	9120	4305	8863	5	3prime_fragment	FALSE	canonical	3	38	junction_5	16.7857082066858	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGAGTTTCCCTGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	80012446	79994531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805
tx.24958	chr8	+	2166	4	NIC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	-8	75	intron_retention	FALSE	canonical	3	499	junction_2	11.4697670227235	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATACTATGTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	80438440	80502046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_80439909_80446286_80446378_80455758_80455880_80501560
tx.24959	chr8	+	924	5	NIC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	6	8	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	204.767398528184	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTCAATCTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	80438485	80501979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_80438604_80439733_80439909_80446286_80446378_80455758_80455880_80501560
tx.2496	chr11	+	1665	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1058	1	-9	-1	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	134	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTCTAGTCATTAACACC	NA	False	NA	NA	False	NA	NA	NA	26337192	26421875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
tx.24960	chr8	+	3971	14	NIC	ENSMUSG00000002190.14	novel	2293	15	NA	NA	-29	-1	combination_of_known_splicesites	TRUE	canonical	2	2	junction_5	10.4473886208029	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGTGTCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	84116466	84155180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
tx.24961	chr8	-	6364	21	ISM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	1202	-3548	1202	-7	3prime_fragment	FALSE	canonical	3	231	junction_13	29.7262089745733	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCTAAACACTGGAAAA	NA	False	NA	NA	False	NA	NA	NA	84419487	84393171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264
tx.24962	chr8	+	6242	23	NNC	ENSMUSG00000013033.17	novel	8181	23	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.6478475018929	2	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	3069	False	NA	NA	False	NA	NA	NA	84626730	84666631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649742_84656086_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
tx.24963	chr8	+	4831	19	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	5405	9	-5021	-9	3prime_fragment	FALSE	canonical	3	47	junction_1	9.10162107389884	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	2738	False	NA	NA	False	NA	NA	NA	84656184	84666631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
tx.24964	chr8	+	4093	18	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	6811	38	-3615	-14	3prime_fragment	FALSE	canonical	3	55	junction_2	8.10869071132344	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAC	4144	False	NA	NA	False	NA	NA	NA	84657590	84666602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
tx.24965	chr8	+	790	2	ISM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	2036	-6	1113	6	3prime_fragment	FALSE	canonical	3	574	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTTCTGTATGGAGG	3104	False	NA	NA	False	NA	NA	NA	84726165	84727044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_84726257_84726345
tx.24966	chr8	+	6984	4	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	566	8	intron_retention	FALSE	canonical	3	94	junction_1	4.54606056566195	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	NA	False	NA	NA	NA	84748665	84756932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_84753521_84753628_84753714_84754754_84754801_84754934
tx.24967	chr8	+	2461	8	NIC	ENSMUSG00000008129.15	novel	2366	9	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	5.99659767480439	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGATCTGTAGCTGTG	1874	False	NA	NA	False	NA	NA	NA	84874644	84899219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_84875028_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
tx.24968	chr8	-	5600	10	NIC	ENSMUSG00000001911.17	novel	1728	10	NA	NA	-1	-30	intron_retention	FALSE	canonical	0	0	junction_5	1.13311544746506	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAGAAATAAAGAAAA	9941	False	NA	NA	False	NA	NA	NA	85526974	85431370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_85435307_85440394_85440487_85448271_85448448_85450356_85450480_85453097_85453232_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85526626
tx.24969	chr8	-	5570	10	FSM	ENSMUSG00000001911.17	ENSMUST00000099070.10	1728	10	57	-3899	57	-5	multi-exon	FALSE	canonical	1	1	junction_9	0.942809041582063	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGAGTGCCTGAGTCTT	9999	False	NA	NA	False	NA	NA	NA	85526916	85431345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_85435307_85440394_85440487_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85526626
tx.2497	chr11	-	1837	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-39	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	30.8175635348128	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTTAAGCATTCCATC	NA	False	NA	NA	False	NA	NA	NA	26543661	26421400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543385
tx.24970	chr8	-	5670	9	FSM	ENSMUSG00000036902.12	ENSMUST00000216286.2	2932	9	-22	-2716	-22	-128	multi-exon	FALSE	canonical	2	4	junction_3	4.55521678957215	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCCTCAATTCTGAAGC	NA	False	NA	NA	False	NA	NA	NA	86427575	86363344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_86367746_86369041_86369156_86374344_86374574_86389807_86389936_86390015_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
tx.24971	chr8	+	4574	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	24.5815764788433	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	86567611	86787272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_86567687_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
tx.24972	chr8	-	6565	8	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-49	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	157.182981890275	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGAGGGTGGTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	87611935	87567764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579163_87579209_87579786_87579918_87587053_87588739_87611449
tx.24973	chr8	-	5997	8	FSM	ENSMUSG00000045333.16	ENSMUST00000109655.9	4907	8	-1092	2	-1092	0	multi-exon	FALSE	canonical	2	9	junction_7	4.95695759225642	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGCCTGGTTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	88687315	88388439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826_88510042_88585911_88586113_88631116_88631177_88685823
tx.24974	chr8	+	1658	5	FSM	ENSMUSG00000036810.17	ENSMUST00000127490.8	1643	5	-17	2	1	2	multi-exon	FALSE	canonical	3	5	junction_2	72.261244799685	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTGGTTAGAGATTTT	NA	False	NA	NA	False	NA	NA	NA	88845397	88861736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_88845498_88846407_88846480_88856322_88856433_88856974_88857030_88860415
tx.24975	chr8	+	4766	12	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	332	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	35.9023008540061	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTGCCTGCTCAT	NA	False	NA	NA	False	NA	NA	NA	88926173	88986349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
tx.24976	chr8	-	1397	3	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	120	junction_1	12	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTCATGTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	89779685	89774451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_89775532_89776215_89776356_89779508
tx.24977	chr8	+	384	2	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCTTCATAAATAATCCT	3431	False	NA	NA	False	NA	NA	NA	89779861	89784300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_+_89779957_89784011
tx.24978	chr8	-	5110	5	NIC	ENSMUSG00000031736.12	novel	1238	7	NA	NA	24	-1	intron_retention	FALSE	canonical	3	9	junction_4	2.54950975679639	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTTGTTTGTGTAATG	NA	False	NA	NA	False	NA	NA	NA	93082724	93052661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_93053091_93071480_93071668_93072977_93073092_93073411_93077383_93082315
tx.24979	chr8	-	174	2	Antisense	novelGene_ENSMUSG00000090188.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATAGCAGGGAG	9923	False	NA	NA	False	NA	NA	NA	95566414	95543361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_-_95543371_95566249
tx.2498	chr11	-	1644	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	248	-3	-50	3	multi-exon	FALSE	canonical	3	73	junction_12	13.1368332899862	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTTAAGCATTCCATC	NA	False	NA	NA	False	NA	NA	NA	26543672	26421400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
tx.24980	chr8	-	2549	9	FSM	ENSMUSG00000040631.9	ENSMUST00000046461.9	2590	9	38	3	38	-3	multi-exon	FALSE	canonical	0	0	junction_8	2.10653744329409	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTACTGTTGATCAATAA	NA	False	NA	NA	False	NA	NA	NA	95602920	95590490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487_95597697_95602758
tx.24981	chr8	+	3547	14	FSM	ENSMUSG00000031785.17	ENSMUST00000093271.8	3574	14	36	-9	36	-9	multi-exon	FALSE	canonical	1	2	junction_1	19.2826991162311	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCAGTTTTGTTTG	7979	False	NA	NA	False	NA	NA	NA	95711034	95740836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_95711286_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
tx.24982	chr8	+	3660	4	ISM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	17574	13	-29	-13	3prime_fragment	FALSE	canonical	3	35	junction_1	4.24264068711928	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACATTC	NA	False	NA	NA	False	NA	NA	NA	96096469	96101695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_96096900_96097323_96097475_96097633_96097750_96098732
tx.24983	chr8	-	2527	4	FSM	ENSMUSG00000031796.8	ENSMUST00000213086.2	2544	4	20	-3	6	0	multi-exon	FALSE	canonical	3	502	junction_2	10.6562449087639	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	96161452	96146876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_96148875_96149410_96149523_96151244_96151325_96161115
tx.24984	chr8	-	5332	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-21	1106	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	89.8287815791798	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGCTCTTCTTGATGT	NA	False	NA	NA	False	NA	NA	NA	96215476	96176258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214829
tx.24985	chr8	-	3257	10	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-49	-804	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	94.6538854178282	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCTTTATAAAGCAGGA	NA	False	NA	NA	False	NA	NA	NA	96215504	96178168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96203839_96203942_96214192_96214305_96214971
tx.24986	chr8	+	1626	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	15	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	127.266998428064	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	96442523	96445635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443607_96444548_96444730_96444820_96444964_96445103
tx.24987	chr8	+	3222	3	FSM	ENSMUSG00000054400.17	ENSMUST00000212939.2	737	3	-37	-2448	4	-342	multi-exon	FALSE	canonical	0	0	junction_2	141	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGTTAATGGCTTCA	4838	False	NA	NA	False	NA	NA	NA	104977538	104987576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_104977728_104983916_104984076_104984702
tx.24988	chr8	+	5644	2	NNC	ENSMUSG00000048371.9	novel	5692	2	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAATTTGGCTTCCT	NA	False	NA	NA	False	NA	NA	NA	105318081	105325649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_105318228_105320151
tx.24989	chr8	-	1837	5	NIC	ENSMUSG00000031887.14	novel	1689	5	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	28.2400424928859	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGCACGCCTTTAATC	535	False	NA	NA	False	NA	NA	NA	105991211	105984916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_105985928_105986068_105986262_105986341_105986797_105987153_105987313_105991192
tx.2499	chr11	+	2575	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-4	136	0	12	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	708	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGGAAAGAGAACCTTT	NA	False	NA	NA	False	NA	NA	NA	29080743	29111692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
tx.24990	chr8	-	3754	7	FSM	ENSMUSG00000014837.16	ENSMUST00000212219.2	2044	7	-437	-1273	-11	0	multi-exon	FALSE	canonical	1	2	junction_6	14.1037819986934	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	False	NA	NA	False	NA	NA	NA	106016147	106007040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015424
tx.24991	chr8	-	2797	6	ISM	ENSMUSG00000014837.16	ENSMUST00000212922.2	3313	7	3414	1	3414	0	3prime_fragment	FALSE	canonical	3	31	junction_5	5.46260011349906	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGGCTTCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	106012268	106007041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887
tx.24992	chr8	-	2531	5	NIC	ENSMUSG00000041679.10	novel	2416	6	NA	NA	7	1	intron_retention	FALSE	canonical	1	2	junction_1	2.44948974278318	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTCTCTGATGTTCTC	6338	False	NA	NA	False	NA	NA	NA	106052899	106038971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_106040197_106040312_106040529_106041707_106042655_106049896_106049999_106052858
tx.24993	chr8	+	3837	15	NIC	ENSMUSG00000014786.9	novel	3499	16	NA	NA	481	-538	intron_retention	FALSE	canonical	0	0	junction_13	2.78204887059292	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGAGCGTCCTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	106075955	106095975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_106076205_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
tx.24994	chr8	-	994	4	FSM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	134	-1	134	1	multi-exon	FALSE	canonical	2	4	junction_3	3.55902608401044	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGACTCAGTCTACAG	NA	False	NA	NA	False	NA	NA	NA	106198024	106194123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197911
tx.24995	chr8	+	1555	10	ISM	ENSMUSG00000050357.10	ENSMUST00000213019.2	4194	39	7661	-52	-1129	8	3prime_fragment	FALSE	canonical	3	41	junction_7	5.83306877706964	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	5160	False	NA	NA	False	NA	NA	NA	106420566	106424827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
tx.24996	chr8	+	1278	3	FSM	ENSMUSG00000005699.17	ENSMUST00000098444.9	1273	3	-5	0	1	0	multi-exon	FALSE	canonical	2	20	junction_1	3	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	106427780	106430125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106427950_106428805_106429029_106429239
tx.24997	chr8	+	2887	2	ISM	ENSMUSG00000005699.17	ENSMUST00000211888.2	1179	3	7	-1414	5	1414	intron_retention	FALSE	canonical	3	15	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106428285	106431542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_106428436_106428805
tx.24998	chr8	-	1427	7	NNC	ENSMUSG00000013155.11	novel	1568	6	NA	NA	21	0	intron_retention	FALSE	canonical	3	34	junction_6	50.8887675884047	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGTTCCATAGGAGC	NA	False	NA	NA	False	NA	NA	NA	106434756	106430282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434556_106434675
tx.24999	chr8	+	4232	3	ISM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	65	-1069	0	1069	intron_retention	FALSE	canonical	3	2641	junction_1	437.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGGTCTCTTTATTC	NA	False	NA	NA	False	NA	NA	NA	106587276	106607031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_106587338_106602165_106602291_106602985
tx.25	chr1	-	5263	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-34	4520	-34	-4520	multi-exon	FALSE	canonical	3	96	junction_2	5	167	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGAGGTTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	9818641	9793366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_9795576_9807190_9807278_9815674
tx.250	chr1	-	2333	6	FSM	ENSMUSG00000026107.12	ENSMUST00000188204.7	972	6	-40	-1321	-14	2	multi-exon	FALSE	canonical	2	4	junction_5	20.9227149289952	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGGAGTAACAGAACTTT	NA	False	NA	NA	False	NA	NA	NA	51517598	51508644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51517530
tx.2500	chr11	+	2617	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-67	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	159.252962838496	39	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGGATCTTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	29080743	29111761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
tx.25002	chr8	-	2341	10	NNC	ENSMUSG00000031921.18	novel	2667	10	NA	NA	117	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	11.6216061022159	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTCTAGCTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	107823029	107796033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_107797198_107798506_107798548_107799191_107799278_107803419_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
tx.25004	chr8	-	2710	2	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTCGTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	108408874	108404227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_108406853_108408789
tx.25005	chr8	-	7503	3	NNC	ENSMUSG00000069895.5	novel	7439	3	NA	NA	-41	-1	intron_retention	FALSE	canonical	3	4	junction_1	6.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTTGCGCCTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	110464412	110453083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_110460378_110461936_110461996_110464262
tx.25006	chr8	-	434	3	ISM	ENSMUSG00000069895.5	ENSMUST00000212726.2	461	4	-3	1592	-3	-1592	5prime_fragment	FALSE	canonical	3	22	junction_2	5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACCCCAGGTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	110464374	110461739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_110461996_110462091_110462158_110464262
tx.25007	chr8	-	2463	3	FSM	ENSMUSG00000001672.15	ENSMUST00000051430.7	2447	3	-15	-1	-15	1	multi-exon	TRUE	canonical	0	0	junction_2	1	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGCCTTGGATTTTT	NA	False	NA	NA	False	NA	NA	NA	110688850	110679541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_110681374_110686344_110686473_110688347
tx.25008	chr8	+	4090	4	NIC	ENSMUSG00000044676.11	novel	3180	5	NA	NA	-15	13	intron_retention	FALSE	canonical	3	16	junction_1	4.98887651569859	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTGAGTTGTAAAACA	920	False	NA	NA	False	NA	NA	NA	110806362	110817655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_110806637_110809309_110810416_110810975_110811084_110815053
tx.25009	chr8	-	1530	6	ISM	ENSMUSG00000031750.16	ENSMUST00000076846.11	1709	7	50272	-10	-12933	-1	3prime_fragment	FALSE	canonical	3	39	junction_4	2.0591260281974	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGATGGTGAACCTGG	NA	False	NA	NA	False	NA	NA	NA	111482263	111468461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862
tx.2501	chr11	+	2345	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	65	0	65	0	multi-exon	FALSE	canonical	3	259	junction_3	30.8097333552481	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTTATTCTTACTT	NA	False	NA	NA	False	NA	NA	NA	29122954	29159641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
tx.25010	chr8	-	1696	7	FSM	ENSMUSG00000031750.16	ENSMUST00000076846.11	1709	7	13	0	13	0	multi-exon	FALSE	canonical	0	0	junction_6	15.61694236683	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	5043	False	NA	NA	False	NA	NA	NA	111532522	111468471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111532365
tx.25011	chr8	-	3457	9	ISM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	13119	5	10160	-5	intron_retention	FALSE	canonical	3	101	junction_7	11.3440513045384	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCTTCAGAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	111615972	111609099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299
tx.25012	chr8	-	6501	11	NIC	ENSMUSG00000033658.17	novel	3104	12	NA	NA	26	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	108.803906179879	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGGTATTTTGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	111758357	111729818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111758253
tx.25013	chr8	+	205	2	Antisense	novelGene_ENSMUSG00000003316.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	21	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGGAGAAGCCAGGCG	1702	False	NA	NA	False	NA	NA	NA	111942453	111990583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_+_111942505_111990429
tx.25014	chr8	-	2517	7	FSM	ENSMUSG00000033579.17	ENSMUST00000038475.9	2492	7	-26	1	-26	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.74535599249993	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAAGACCCATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	112120482	112071773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112073154_112074562_112074816_112075835_112076009_112082031_112082139_112082709_112082853_112093025_112093119_112120114
tx.25015	chr8	+	2851	5	ISM	ENSMUSG00000033545.15	ENSMUST00000174376.8	501	6	-991	-572	-144	100	intron_retention	FALSE	canonical	1	3	junction_1	52.1200537221519	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTCGACTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	112263127	112349705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_112264197_112333378_112333481_112335924_112336021_112345837_112345944_112348227
tx.25016	chr8	-	2739	9	FSM	ENSMUSG00000031949.18	ENSMUST00000139820.8	2762	9	23	0	23	0	multi-exon	FALSE	canonical	3	40	junction_8	9.81070843517429	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAGGGTGACTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	112718911	112697496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
tx.25017	chr8	+	6010	4	ISM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	-44	-7	3	7	intron_retention	FALSE	canonical	3	123	junction_1	3.39934634239519	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTTTTGGGAATTATT	NA	False	NA	NA	False	NA	NA	NA	115166397	115180565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899
tx.25018	chr8	+	1576	9	NNC	ENSMUSG00000004637.16	novel	1715	9	NA	NA	1	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.8039908039506	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCCATCTTTTCCGCTC	NA	False	NA	NA	False	NA	NA	NA	115166442	115445327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175040_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115444837
tx.25019	chr8	-	1394	3	FSM	ENSMUSG00000014633.16	ENSMUST00000078589.7	523	3	-39	-832	-23	-16	multi-exon	FALSE	canonical	3	30	junction_1	157.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAGCTAATCAATTCA	NA	False	NA	NA	False	NA	NA	NA	117648217	117615439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_117616599_117637866_117637974_117648089
tx.2502	chr11	+	4806	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	29	-2	intron_retention	FALSE	canonical	3	27	junction_4	78.3308084699472	33	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACGTGTTTTAATCAC	NA	False	NA	NA	False	NA	NA	NA	29122918	29170795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
tx.25020	chr8	-	2631	3	FSM	ENSMUSG00000031847.9	ENSMUST00000213068.2	1482	3	-9	-1140	-9	-374	multi-exon	FALSE	canonical	1	4	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTTTTTGGTTTGTTTT	8516	False	NA	NA	False	NA	NA	NA	117705707	117696706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_117698896_117700190_117700439_117705513
tx.25021	chr8	-	2418	10	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53604	13643	-2	1	internal_fragment	FALSE	canonical	3	6	junction_9	8.83735058895475	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCATGTTCTTATTTA	NA	False	NA	NA	False	NA	NA	NA	117755584	117736060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
tx.25022	chr8	-	1999	5	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53603	22961	-3	4910	internal_fragment	FALSE	canonical	3	6	junction_4	1.92028643696715	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGAGCACAGGATCATA	NA	False	NA	NA	False	NA	NA	NA	117755585	117745378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
tx.25023	chr8	+	3264	10	ISM	ENSMUSG00000031825.17	ENSMUST00000108972.4	2928	15	16194	-1215	5712	-2	3prime_fragment	FALSE	canonical	0	0	junction_2	1.63299316185545	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGGTAGCACATCTTT	851	False	NA	NA	False	NA	NA	NA	120745658	120779530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_120745693_120750306_120750442_120752800_120752862_120755535_120755603_120756004_120756136_120757123_120757168_120757806_120757880_120760298_120760375_120766764_120766899_120777021
tx.25024	chr8	+	4518	15	NIC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	30	10	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	36.3581953257713	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCTGGTCAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	121264197	121306229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.25025	chr8	-	1147	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	592.891355983539	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	False	NA	NA	False	NA	NA	NA	121394807	121384571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121387232_121387410_121387522_121387600_121394495
tx.25026	chr8	-	2402	8	NIC	ENSMUSG00000031816.16	novel	2415	8	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	11	junction_5	24.5581359393649	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTGCTTGTATGT	NA	False	NA	NA	False	NA	NA	NA	121835122	121824300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831298_121832312_121832427_121833608_121833713_121835026
tx.25027	chr8	-	407	2	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTATGGTTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	122106311	122105772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_122106116_122106247
tx.25028	chr8	-	7342	13	NIC	ENSMUSG00000061410.7	novel	7444	13	NA	NA	3	-17	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	11.000946928939	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAACTCAACAT	NA	False	NA	NA	False	NA	NA	NA	122379637	122325458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_122328989_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
tx.25029	chr8	+	3830	2	ISM	ENSMUSG00000109957.2_ENSMUSG00000049577.16	ENSMUST00000210581.2	252	3	-3515	409	1025	-409	5prime_fragment	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCTGCTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	123062394	123069430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_123065995_123069200
tx.2503	chr11	+	5093	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	30	2	30	-2	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	459	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACGTGTTTTAATCAC	NA	False	NA	NA	False	NA	NA	NA	29122919	29170795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
tx.25030	chr8	-	1598	3	FSM	ENSMUSG00000006587.7	ENSMUST00000006762.7	1628	3	31	-1	31	1	multi-exon	FALSE	canonical	3	3	junction_2	1	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTTGACGTCTCGAGT	NA	False	NA	NA	False	NA	NA	NA	123187441	123180945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123181774_123182861_123183468_123187277
tx.25031	chr8	-	7266	5	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	26	-3	26	3	intron_retention	TRUE	canonical	3	110	junction_3	7.36545993132812	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCCTTGGTCCTGGGTTT	9983	False	NA	NA	False	NA	NA	NA	123202777	123192882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938
tx.25032	chr8	+	1772	14	ISM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	15	1345	15	3	intron_retention	FALSE	canonical	3	114	junction_5	16.680782976529	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8877	False	NA	NA	False	NA	NA	NA	123202896	123208486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209
tx.25033	chr8	+	1618	15	FSM	ENSMUSG00000049482.17	ENSMUST00000151855.8	3999	15	-10	2391	-10	3	multi-exon	FALSE	canonical	3	8	junction_11	35.9174222974004	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8918	False	NA	NA	False	NA	NA	NA	123202937	123208486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209_123208269_123208334
tx.25034	chr8	-	1691	7	ISM	ENSMUSG00000014444.18	ENSMUST00000128383.8	6317	40	15911	-266	-105	5	3prime_fragment	FALSE	canonical	3	120	junction_4	11.1168040971015	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	2071	False	NA	NA	False	NA	NA	NA	123210713	123208454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224
tx.25035	chr8	-	5690	35	ISM	ENSMUSG00000014444.18	ENSMUST00000067252.14	8216	51	53784	21	659	2	3prime_fragment	FALSE	canonical	3	64	junction_34	22.455877537655	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	NA	False	NA	NA	False	NA	NA	NA	123224284	123208457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190
tx.25036	chr8	+	2906	9	ISM	ENSMUSG00000000738.19	ENSMUST00000153285.9	2481	16	29	15383	-3	2383	5prime_fragment	FALSE	canonical	3	204	junction_8	29.1673511824437	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTGTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	123792243	123809109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375
tx.25037	chr8	+	2412	8	ISM	ENSMUSG00000034796.15	ENSMUST00000134235.8	3018	14	9072	-5	-71	3	3prime_fragment	FALSE	canonical	3	10	junction_1	4.85293935756087	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCCTTTCTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	123853184	123861924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
tx.25038	chr8	+	2636	8	NIC	ENSMUSG00000034796.15	novel	2398	15	NA	NA	-89	2	intron_retention	FALSE	canonical	2	3	junction_1	6.87497680886626	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCCTTTCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	123853166	123861923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_123853474_123853559_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
tx.25039	chr8	-	1162	7	FSM	ENSMUSG00000000739.15	ENSMUST00000000755.15	3805	7	-13	2656	-9	1	multi-exon	FALSE	canonical	3	57	junction_6	18.7764628073435	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGACTCTGTCCCAGGC	9730	False	NA	NA	False	NA	NA	NA	123885022	123869586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884327_123884926
tx.2504	chr11	+	5067	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	30	-7	intron_retention	FALSE	canonical	3	28	junction_13	76.4560585492666	45	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATTCACGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29122919	29170790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161627_29161792_29163593_29163797_29168455
tx.25040	chr8	+	2991	3	FSM	ENSMUSG00000048478.8	ENSMUST00000212161.2	2941	3	-44	-6	0	6	multi-exon	FALSE	canonical	1	1	junction_2	5.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATAGTCTTAATTATTC	NA	False	NA	NA	False	NA	NA	NA	123939570	123943650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_123939737_123939826_123940054_123941052
tx.25041	chr8	-	2383	3	FSM	ENSMUSG00000033594.12	ENSMUST00000098327.2	2380	3	-2	-1	-2	1	multi-exon	FALSE	canonical	1	2	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGGAAAGGCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	123962950	123958995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123960985_123962256_123962589_123962888
tx.25042	chr8	+	4878	10	ISM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	65	-802	-11	802	intron_retention	FALSE	canonical	3	13	junction_5	4.93913572686508	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGTTGCTACATTTTA	1699	False	NA	NA	False	NA	NA	NA	123980998	123997286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338
tx.25043	chr8	+	4142	16	FSM	ENSMUSG00000031967.16	ENSMUST00000098320.6	4111	16	-31	0	-31	0	multi-exon	FALSE	canonical	3	9	junction_13	180.225291109643	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGAGTTTTGCCT	7464	False	NA	NA	False	NA	NA	NA	124204610	124230655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124227971_124228173_124228253_124228449_124228586
tx.25044	chr8	+	2192	4	NIC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	2	-18	intron_retention	FALSE	canonical	3	65	junction_2	17.9691092959247	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGGTTCAGATAGACA	NA	False	NA	NA	False	NA	NA	NA	126460978	126474956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_126461089_126462806_126464159_126471974_126472185_126474436
tx.25045	chr8	-	3394	3	ISM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	47133	-1330	47133	1330	3prime_fragment	FALSE	canonical	3	49	junction_2	3	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTGGCAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	127154671	127150737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_127153880_127154161_127154299_127154556
tx.25046	chr8	-	6355	29	NIC	ENSMUSG00000090290.3	novel	6383	30	NA	NA	-27	15	combination_of_known_splicesites	FALSE	canonical	1	2	junction_27	10.8658329883453	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGCTTTTTCTTAGAA	NA	False	NA	NA	False	NA	NA	NA	127201831	127152052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127198040_127198139_127200993
tx.25047	chr8	+	2985	5	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-40	2272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.6999472573253	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCGTGGTATCTTT	NA	False	NA	NA	False	NA	NA	NA	129990081	130011597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463_130008496_130008956
tx.25048	chr9	+	7085	11	NIC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	-1	-454	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	19.3713706278105	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATGGGACTATGGCAA	-9	True	NA	NA	False	NA	NA	NA	3335476	3390700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_3335595_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
tx.25049	chr9	+	3582	11	NIC	ENSMUSG00000025899.15	novel	3603	12	NA	NA	7	122	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	20.4227813972534	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTGTCTATTTTTT	-1	True	NA	NA	False	NA	NA	NA	3335484	3387051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_3335749_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
tx.2505	chr11	-	1559	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	100	5	-21	-5	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTTTGGATGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	29197309	29171536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
tx.25050	chr9	+	2898	8	FSM	ENSMUSG00000041624.11	ENSMUST00000115733.3	2243	8	-458	-197	-458	197	multi-exon	FALSE	canonical	0	0	junction_6	6.25642526870234	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTCTGGTAATGGATAT	-5	True	NA	NA	False	NA	NA	NA	3532319	3894933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395_3759882_3797237_3797382_3865357_3865513_3894503
tx.25051	chr9	-	1331	4	NIC	ENSMUSG00000025894.12	novel	2519	5	NA	NA	0	-996	combination_of_known_splicesites	FALSE	canonical	3	71	junction_3	376.029549666276	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGTCGTCTTAGGG	-3	True	NA	NA	False	NA	NA	NA	4309471	4295960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309253
tx.25052	chr9	-	3982	11	FSM	ENSMUSG00000040729.9	ENSMUST00000037397.8	3819	11	-163	0	-163	0	multi-exon	FALSE	canonical	1	3	junction_3	3.74299345444258	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGATCTCTGCTTTTTAT	-4	True	NA	NA	False	NA	NA	NA	8134458	8076461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_8076948_8079495_8079561_8087228_8087427_8092244_8092318_8095214_8095328_8099732_8101843_8103318_8103518_8112080_8112193_8120642_8120789_8130196_8130317_8134098
tx.25053	chr9	-	5393	11	NIC	ENSMUSG00000040729.9	novel	3819	11	NA	NA	-164	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	3.9496835316263	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGATCTCTGCTTTTT	-5	True	NA	NA	False	NA	NA	NA	8134459	8076463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_8078360_8079495_8079561_8087228_8087427_8092244_8092318_8095214_8095328_8099732_8101843_8103318_8103518_8112080_8112193_8120642_8120789_8130196_8130317_8134098
tx.25054	chr9	+	3747	11	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	-2	-12	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	54.6652540467892	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCTGTAATGAATGAC	NA	False	NA	NA	False	NA	NA	NA	13739009	13757825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748135_13748269_13750935_13751038_13755324
tx.25055	chr9	+	3686	10	NNC	ENSMUSG00000037808.14	novel	3702	10	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	37.2677996249965	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCTGTAATGAATGAC	NA	False	NA	NA	False	NA	NA	NA	13739012	13757825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748135_13748269_13750935_13751038_13755324
tx.25056	chr9	-	8936	13	FSM	ENSMUSG00000013076.18	ENSMUST00000013220.8	8957	13	18	3	18	-3	multi-exon	FALSE	canonical	2	6	junction_12	3.15788255358274	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGCTCCTCTTTTACC	NA	False	NA	NA	False	NA	NA	NA	14526284	14453264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14526029
tx.25057	chr9	+	2379	4	FSM	ENSMUSG00000031932.15	ENSMUST00000034408.12	3586	4	-237	1444	-237	-965	multi-exon	FALSE	canonical	2	2	junction_2	1.63299316185545	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAGCCTGTTAA	NA	False	NA	NA	False	NA	NA	NA	14771268	14780641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_14772217_14776067_14776194_14778144_14778279_14779470
tx.25058	chr9	+	1230	3	NNC	ENSMUSG00000058173.13	novel	994	3	NA	NA	287	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTCTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	15405014	15456556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_15405446_15436923_15437001_15455834
tx.25059	chr9	+	7876	5	ISM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	13773	1	697	-1	3prime_fragment	FALSE	canonical	3	874	junction_3	41.5654604208831	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCTTAAGAGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	18217193	18228737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
tx.2506	chr11	+	7448	30	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	-33	5245	-33	758	5prime_fragment	FALSE	canonical	3	45	junction_8	9.8353871035569	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTGTATTTTTACTTC	NA	False	NA	NA	False	NA	NA	NA	29323624	29455563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
tx.25060	chr9	-	6923	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	24	2287	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_9	21.1922417670031	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGATGGTTCCTTCG	NA	False	NA	NA	False	NA	NA	NA	20371432	20344038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371275
tx.25061	chr9	-	3058	9	FSM	ENSMUSG00000059475.14	ENSMUST00000080386.13	2417	9	-19	-622	-15	-217	multi-exon	FALSE	canonical	2	5	junction_8	9.71387538524146	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTATGACTTTGCTGC	NA	False	NA	NA	False	NA	NA	NA	20404057	20380220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681_20403748_20403993
tx.25062	chr9	-	3282	8	ISM	ENSMUSG00000059475.14	ENSMUST00000080386.13	2417	9	2	-621	2	-218	intron_retention	FALSE	canonical	3	13	junction_7	7.74333156163866	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTATGACTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	20404036	20380221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681
tx.25063	chr9	+	3370	5	ISM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	181	11162	-19	-224	intron_retention	FALSE	canonical	3	29	junction_1	4.06201920231798	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAAACCTTATAAGTGT	23	False	NA	NA	False	NA	NA	NA	20492801	20505543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634
tx.25064	chr9	+	3205	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	7	-6	intron_retention	FALSE	canonical	3	7	junction_3	41.2812171439856	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAGAGTAATAGCCTT	NA	False	NA	NA	False	NA	NA	NA	20779982	20785597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20781057_20782532_20782671_20782822_20784163_20784561_20784837
tx.25065	chr9	-	1635	5	FSM	ENSMUSG00000032175.12	ENSMUST00000214864.2	1662	5	29	-2	18	2	multi-exon	FALSE	canonical	3	60	junction_4	20.5106679559687	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTTACTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	21042510	21034752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
tx.25066	chr9	+	2803	4	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8054	-1197	8054	-424	3prime_fragment	FALSE	canonical	3	21	junction_2	2.62466929133727	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGACAGTGAACTTGT	NA	False	NA	NA	False	NA	NA	NA	21116054	21124120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_21116421_21116586_21116710_21117440_21117624_21121989
tx.25067	chr9	-	1730	11	FSM	ENSMUSG00000003309.15	ENSMUST00000115433.11	2586	11	11	845	-10	3	multi-exon	FALSE	canonical	2	2	junction_6	7.33552997403732	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGTGCTTCTTGGGT	1330	False	NA	NA	False	NA	NA	NA	21223622	21206753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214068_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
tx.25068	chr9	-	2095	2	ISM	ENSMUSG00000032180.12	ENSMUST00000213316.2	1454	3	-1	2	-1	0	intron_retention	FALSE	canonical	3	565	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	NA	False	NA	NA	NA	21421484	21418850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_21419688_21420226
tx.25069	chr9	-	1365	3	ISM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	2591	2	2553	-2	3prime_fragment	FALSE	canonical	3	81	junction_1	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCATGTCACGCCCATGG	8677	False	NA	NA	False	NA	NA	NA	21501515	21499983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_21501057_21501141_21501325_21501406
tx.2507	chr11	+	9397	32	FSM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	-21	0	-21	0	multi-exon	FALSE	canonical	3	30	junction_31	11.5379300285811	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGTTACAGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	29323636	29460808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
tx.25070	chr9	-	1651	3	ISM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	68	0	68	0	intron_retention	FALSE	canonical	3	227	junction_2	6	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	21838690	21832304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_21832646_21837286_21837451_21837544
tx.25071	chr9	+	2644	10	FSM	ENSMUSG00000040563.14	ENSMUST00000046371.13	2626	10	-18	0	-18	0	multi-exon	TRUE	canonical	3	9	junction_8	8.89999306422257	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTGGCCTTCTGCCTG	79	False	NA	NA	False	NA	NA	NA	21848310	21860200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
tx.25072	chr9	-	2295	8	NIC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	-31	0	intron_retention	FALSE	canonical	3	32	junction_7	10.0203873810001	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9395	False	NA	NA	False	NA	NA	NA	21982703	21966755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21969712_21976996_21977213_21979443_21979488_21982344
tx.25073	chr9	-	3660	3	ISM	ENSMUSG00000001348.16	ENSMUST00000217643.2	1447	6	-477	-11	-477	0	intron_retention	FALSE	canonical	3	251	junction_1	4.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	8419	False	NA	NA	False	NA	NA	NA	22043604	22038022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_22038559_22038970_22039317_22040826
tx.25074	chr9	+	2452	2	NNC	ENSMUSG00000100002.3	novel	921	3	NA	NA	-230	-5854	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTTCTTTTTACAAT	NA	False	NA	NA	False	NA	NA	NA	25063179	25081003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_25063484_25078855
tx.25076	chr9	+	5525	34	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	79	0	intron_retention	FALSE	canonical	3	212	junction_3	21.3628411629353	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	NA	NA	NA	26942023	27006611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
tx.25077	chr9	+	1819	2	Genic_Genomic	ENSMUSG00000079884.7	novel	604	1	NA	NA	-84	1324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCAGACATAGGATTCA	NA	False	NA	NA	False	NA	NA	NA	33639458	33641470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr9_+_33639722_33639914
tx.25079	chr9	-	1632	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_5	6.40624695121879	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCGCTGTCTCATCAGAG	NA	False	NA	NA	False	NA	NA	NA	34899995	34889332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34899788
tx.2508	chr11	-	919	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	-2	1	-2	-1	multi-exon	FALSE	canonical	3	382	junction_1	0	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTGTCTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	29465035	29462876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_29463677_29464916
tx.25080	chr9	-	1910	8	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	45.5246064883417	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAGCCTTCACCTTATT	6368	False	NA	NA	False	NA	NA	NA	35179097	35128258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
tx.25081	chr9	-	1603	7	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	58.402815761647	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCAATTTCTTTATGA	6390	False	NA	NA	False	NA	NA	NA	35179075	35128315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
tx.25082	chr9	+	1888	6	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	4	-3	intron_retention	FALSE	canonical	3	136	junction_5	9.97196068985433	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTTTAATTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	35179164	35187258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35184143_35184763_35184862_35186359
tx.25083	chr9	+	3643	18	ISM	ENSMUSG00000038119.16	ENSMUST00000119129.10	7503	20	6	15726	6	-15725	5prime_fragment	FALSE	canonical	1	3	junction_6	3.80765937239583	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCGTGTGTGCCCAGCC	NA	False	NA	NA	False	NA	NA	NA	35332859	35403222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140
tx.25084	chr9	+	716	2	Intergenic	novelGene_372	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTATTTCAACCATGTA	NA	False	NA	NA	False	NA	NA	NA	35409130	35412799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_+_35409711_35412663
tx.25085	chr9	+	3267	5	NIC	ENSMUSG00000074452.14	novel	1690	11	NA	NA	14	2340	intron_retention	FALSE	canonical	2	5	junction_2	4.49305018890286	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGTTTGGTCTGGGA	NA	False	NA	NA	False	NA	NA	NA	35481593	35560093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_35481827_35485525_35485684_35518890_35519016_35523067_35523168_35557442
tx.25086	chr9	+	1099	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	30	1490	30	-1490	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTTATGTTTACATT	NA	False	NA	NA	False	NA	NA	NA	37119548	37134506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
tx.25087	chr9	-	4347	17	NIC	ENSMUSG00000032122.16	novel	2945	19	NA	NA	1	3	intron_retention	FALSE	canonical	3	62	junction_13	6.96307223860273	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACAAAGATTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	37166709	37141804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
tx.25088	chr9	-	7101	16	FSM	ENSMUSG00000034303.9	ENSMUST00000213633.2	3331	16	34	-3804	-6	3804	multi-exon	FALSE	canonical	2	5	junction_9	5.33166640616859	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTGTATTGACTTTTA	NA	False	NA	NA	False	NA	NA	NA	37259694	37183326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_37187862_37188653_37188778_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259563
tx.25089	chr9	-	2686	14	Fusion	ENSMUSG00000034303.9_ENSMUSG00000111421.2	novel	3180	8	NA	NA	-9	-708	multi-exon	FALSE	canonical	0	0	junction_1	6.76923076923077	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCTTATGGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	37259662	37208129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr9_-_37208362_37212129_37212266_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259329
tx.2509	chr11	+	2644	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	-46	-173	-6	173	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	NA	False	NA	NA	NA	29476401	29495452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
tx.25090	chr9	-	2876	4	FSM	ENSMUSG00000034303.9	ENSMUST00000217238.3	1747	4	-28	-1101	3	976	multi-exon	FALSE	canonical	3	11	junction_3	4.92160768674447	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTTTTGGGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	37259681	37251729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_37253918_37255179_37255330_37259033_37259220_37259329
tx.25091	chr9	+	1336	6	ISM	ENSMUSG00000001943.9	ENSMUST00000002008.7	1166	7	260	0	221	0	3prime_fragment	FALSE	canonical	2	5	junction_5	1.62480768092719	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTTCTCCTTTCTAGTG	NA	False	NA	NA	False	NA	NA	NA	37450810	37455497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_37451323_37451589_37451798_37452622_37452782_37453650_37453771_37453884_37454030_37455305
tx.25092	chr9	-	7020	19	NNC	ENSMUSG00000040111.18	novel	7445	19	NA	NA	-305	2	intron_retention	FALSE	canonical	1	1	junction_18	6.45975193499939	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAAATGGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	40245129	40204538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40245038
tx.25093	chr9	-	6012	10	ISM	ENSMUSG00000040111.18	ENSMUST00000216821.2	7445	19	67987	5	-1439	-2	3prime_fragment	FALSE	canonical	3	12	junction_6	6.01438604565527	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATAAATGGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	40219730	40204536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588
tx.25094	chr9	-	7031	18	ISM	ENSMUSG00000040111.18	ENSMUST00000216821.2	7445	19	42664	7	-229	2	3prime_fragment	FALSE	canonical	3	12	junction_6	4.94957269834415	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAAATGGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	40245053	40204538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740
tx.25095	chr9	-	788	3	ISM	ENSMUSG00000087135.8	ENSMUST00000149386.8	819	4	677	3	-43	3	3prime_fragment	FALSE	canonical	3	11	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGTGACTGCCGGT	NA	False	NA	NA	False	NA	NA	NA	40694800	40692040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_40692492_40694218_40694287_40694531
tx.25096	chr9	-	3636	21	FSM	ENSMUSG00000032017.15	ENSMUST00000114865.8	5887	21	-26	2277	-26	0	multi-exon	TRUE	canonical	1	2	junction_7	2.95761728423405	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTGTTGATGTCCTT	NA	False	NA	NA	False	NA	NA	NA	42855815	42431707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_42432482_42435775_42435895_42448609_42448739_42453117_42453344_42455053_42455220_42458862_42459037_42461702_42461813_42477594_42477709_42502645_42502850_42509149_42509258_42533354_42533460_42534221_42534375_42540272_42540435_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788_42719921_42730165_42730271_42855622
tx.25097	chr9	-	4621	31	ISM	ENSMUSG00000059495.15	ENSMUST00000072767.7	10059	42	89531	4478	10706	-4478	internal_fragment	FALSE	canonical	3	18	junction_25	4.01995024844836	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTATAATTATACATT	NA	False	NA	NA	False	NA	NA	NA	42927250	42879616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198
tx.25098	chr9	-	3468	14	FSM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	7	1	-1	-1	multi-exon	TRUE	canonical	0	0	junction_2	1.38888231425137	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGGTGTGAATGTCGA	NA	False	NA	NA	False	NA	NA	NA	44198834	44184485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512
tx.25099	chr9	-	4436	15	FSM	ENSMUSG00000032131.17	ENSMUST00000161354.9	3999	15	-438	1	-438	-1	multi-exon	FALSE	canonical	0	0	junction_2	1.34202101628971	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGGTGTGAATGTCGA	NA	False	NA	NA	False	NA	NA	NA	44200350	44184485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512_44198763_44199310
tx.251	chr1	-	2857	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	-19	0	7	0	multi-exon	FALSE	canonical	3	37	junction_5	8.25590697622012	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	False	NA	NA	False	NA	NA	NA	51517577	51508646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
tx.2510	chr11	+	2831	13	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	2	173	intron_retention	FALSE	canonical	3	11	junction_2	65.9917924189567	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	NA	False	NA	NA	NA	29476458	29495452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_29476844_29479928_29480155_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
tx.25100	chr9	-	6768	5	ISM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	7291	-2195	256	2195	3prime_fragment	FALSE	canonical	3	47	junction_1	3.90512483795333	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCCCTAATTAAATGCT	NA	False	NA	NA	False	NA	NA	NA	44209677	44201541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630
tx.25101	chr9	-	5099	8	ISM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	5878	1	-335	-1	3prime_fragment	FALSE	canonical	3	40	junction_7	6.6944997222057	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGAGTGTGGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	44211090	44203737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859
tx.25102	chr9	-	5359	11	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	19.7284059163431	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTTGAGTGTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	44216942	44203739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44209868_44209924_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
tx.25103	chr9	-	3365	14	NIC	ENSMUSG00000032120.12	novel	4337	14	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	10.0701680236066	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGGAGTGGCTGGTTAT	5313	False	NA	NA	False	NA	NA	NA	44231584	44221510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_44222565_44224802_44225089_44225174_44225312_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
tx.25104	chr9	+	2361	9	FSM	ENSMUSG00000032114.10	ENSMUST00000213388.2	2344	9	-23	6	-19	2	multi-exon	FALSE	canonical	2	2	junction_1	9.53939201416946	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGTCAGTGGCTCATC	NA	False	NA	NA	False	NA	NA	NA	44308372	44314259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44308744_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
tx.25105	chr9	-	3397	9	NNC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_3	20.2542433825606	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGATTGAACCTGTAAA	8935	False	NA	NA	False	NA	NA	NA	44329341	44321455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_44321662_44321744_44321878_44321987_44323370_44323419_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
tx.25106	chr9	-	1231	10	ISM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	565	1	0	-1	intron_retention	FALSE	canonical	3	28	junction_6	11.8925228091197	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTGATTGAACCTGTAA	8975	False	NA	NA	False	NA	NA	NA	44329301	44321456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929
tx.25107	chr9	+	5761	8	FSM	ENSMUSG00000063382.7	ENSMUST00000220303.2	5760	8	-75	74	-75	-74	multi-exon	FALSE	canonical	2	12	junction_1	3.98978286964827	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTGCCGTATTTCTG	1843	False	NA	NA	False	NA	NA	NA	44394046	44421645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44394784_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
tx.25108	chr9	+	4648	9	NNC	ENSMUSG00000063382.7	novel	522	2	NA	NA	-73	-587	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.62853679178143	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTTTCCTCCAGTG	1800	False	NA	NA	False	NA	NA	NA	44409530	44421132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_44409566_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
tx.25109	chr9	+	2931	15	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-243	-3228	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.5742941778013	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATACATATATATATATT	NA	False	NA	NA	False	NA	NA	NA	44515945	44548800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_44516043_44518244_44518335_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
tx.2511	chr11	+	2951	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	-6	-204	1	173	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	NA	False	NA	NA	NA	29476450	29495452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
tx.25110	chr9	-	2988	13	NIC	ENSMUSG00000048537.17	novel	3589	17	NA	NA	-90	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	9.3392838174146	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	44619814	44597604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609015_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690
tx.25111	chr9	-	3076	13	NIC	ENSMUSG00000048537.17	novel	3485	16	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	9.86963637740632	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	44619824	44597604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619579
tx.25112	chr9	-	2407	9	FSM	ENSMUSG00000002032.18	ENSMUST00000002100.8	2448	9	45	-4	-20	-3	multi-exon	FALSE	canonical	2	3	junction_8	3.68908864084343	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTTTGTTCATTTCTT	8217	False	NA	NA	False	NA	NA	NA	44710559	44705068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44706346_44706487_44706575_44706706_44706808_44706978_44707010_44707292_44707425_44707620_44707912_44709417_44709730_44709960_44710055_44710477
tx.25113	chr9	-	6095	20	FSM	ENSMUSG00000059890.17	ENSMUST00000117549.8	3415	20	38	-2718	-2	-3	multi-exon	FALSE	canonical	2	4	junction_19	14.0720347023741	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCTTGTTAGTTCTTCA	5338	False	NA	NA	False	NA	NA	NA	44876860	44834427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44876782
tx.25114	chr9	+	686	3	ISM	ENSMUSG00000032087.12	ENSMUST00000239429.2	6336	33	-1	302536	1	4858	5prime_fragment	FALSE	canonical	2	5	junction_2	2.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAATCGTGGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	45341589	45361926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_45341811_45358962_45359281_45361779
tx.25115	chr9	-	5624	31	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	7	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	19.8072938305284	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	45739930	45678248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
tx.25116	chr9	+	3708	9	NIC	ENSMUSG00000032086.13	novel	6058	9	NA	NA	1	19	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	7.80924932371864	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGAGAGAGAGAACTC	7299	False	NA	NA	False	NA	NA	NA	45749878	45773536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_45750587_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
tx.25117	chr9	-	3581	14	FSM	ENSMUSG00000042790.17	ENSMUST00000160699.9	2287	14	8	-1302	8	-23	multi-exon	FALSE	canonical	1	1	junction_13	15.6941929485938	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGAGCTCATGGATGAA	9094	False	NA	NA	False	NA	NA	NA	45818201	45774829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45818035
tx.25118	chr9	-	5462	15	ISM	ENSMUSG00000039542.17	ENSMUST00000193547.6	6050	18	231489	2	1113	-2	3prime_fragment	FALSE	canonical	1	2	junction_5	47.2159606359493	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTCTAGTCCAACTGGG	7483	False	NA	NA	False	NA	NA	NA	49478736	49413437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636
tx.25119	chr9	-	195	2	Intergenic	novelGene_374	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGCTTTGGACATGA	9066	False	NA	NA	False	NA	NA	NA	49789886	49787448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_-_49787550_49789792
tx.2512	chr11	-	624	5	FSM	ENSMUSG00000020460.16	ENSMUST00000102844.4	637	5	13	0	13	0	multi-exon	FALSE	canonical	0	0	junction_3	5966.04937856703	303	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	NA	False	NA	NA	NA	29497847	29495845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680
tx.25120	chr9	+	951	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	88	-93	2	0	multi-exon	FALSE	canonical	3	16	junction_1	1.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCGTGTTTGCAAAC	NA	False	NA	NA	False	NA	NA	NA	50664294	50667936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_50664778_50665811_50665935_50667591
tx.25121	chr9	-	4663	15	ISM	ENSMUSG00000034218.17	ENSMUST00000118282.9	9819	62	77286	-2015	-3063	2015	3prime_fragment	FALSE	canonical	0	0	junction_13	15.299226337649	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTGACTATACAACCGT	NA	False	NA	NA	False	NA	NA	NA	53367980	53348433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793
tx.25122	chr9	-	5771	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	-4	-74	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	97.9621422534179	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCATCTATCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	53578791	53525955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
tx.25123	chr9	-	10665	44	FSM	ENSMUSG00000041268.18	ENSMUST00000118163.8	10614	44	-60	9	-60	-3	multi-exon	TRUE	canonical	3	8	junction_28	15.8606697115632	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTAATCCCCTAAACT	6872	False	NA	NA	False	NA	NA	NA	54408970	54272450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54287058_54287122_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303655_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
tx.25124	chr9	-	3783	6	NNC	ENSMUSG00000032311.18	novel	721	6	NA	NA	-24	1834	intron_retention	FALSE	canonical	0	0	junction_5	9.20869154657707	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAGCAAAACCAGA	223	False	NA	NA	False	NA	NA	NA	55149769	55125671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_55128897_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55149663
tx.25125	chr9	-	2927	6	NNC	ENSMUSG00000032311.18	novel	721	6	NA	NA	-8516	1167	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	6.62117814289874	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGCTTAAGTTTTTCA	5570	False	NA	NA	False	NA	NA	NA	55199425	55126338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_55128693_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55199304
tx.25126	chr9	+	1779	15	FSM	ENSMUSG00000032322.15	ENSMUST00000059206.8	1863	15	78	6	64	6	multi-exon	FALSE	canonical	1	2	junction_9	2.96922995583236	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCACATTCTTCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	55997323	56036166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035010_56035145_56035872
tx.25127	chr9	-	3778	7	FSM	ENSMUSG00000049556.6	ENSMUST00000210032.2	3627	7	-778	627	-448	3	multi-exon	FALSE	canonical	0	0	junction_2	1.34370962471642	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGTCGGAATGCAAACTT	NA	False	NA	NA	False	NA	NA	NA	56704200	56526385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_56528600_56560883_56561117_56581706_56581794_56592403_56592566_56631584_56631630_56682822_56682933_56703273
tx.25128	chr9	-	3391	3	FSM	ENSMUSG00000074284.7	ENSMUST00000128125.2	1241	3	-148	-2002	11	2002	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTCTGACTCTGTTCC	NA	False	NA	NA	False	NA	NA	NA	56979239	56961911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_56964423_56964552_56965086_56978892
tx.25129	chr9	+	2814	16	FSM	ENSMUSG00000032308.10	ENSMUST00000053230.7	2826	16	9	3	9	-3	multi-exon	FALSE	canonical	3	37	junction_2	6.816320284598	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCATTTCTTCTTGCCT	NA	False	NA	NA	False	NA	NA	NA	57496743	57503513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225
tx.2513	chr11	-	583	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	208	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	1284	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	NA	False	NA	NA	NA	29497901	29495845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
tx.25130	chr9	+	3331	14	FSM	ENSMUSG00000038264.9	ENSMUST00000043059.9	3297	14	-34	0	-33	0	multi-exon	TRUE	canonical	1	1	junction_4	2.43495258328376	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGTGCCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	57847361	57870148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_57847612_57860818_57860962_57861452_57861495_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
tx.25131	chr9	+	1843	7	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	122.45498038962	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGAAGTGCAGCTGGC	NA	False	NA	NA	False	NA	NA	NA	58160463	58169801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_58160561_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
tx.25132	chr9	+	2688	3	FSM	ENSMUSG00000066607.6	ENSMUST00000085658.5	2139	3	-511	-38	-511	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGGGGCCCACAGGCC	NA	False	NA	NA	False	NA	NA	NA	58395374	58407063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_58396523_58396951_58397676_58406247
tx.25133	chr9	-	3367	9	NIC	ENSMUSG00000035914.12	novel	3603	8	NA	NA	290	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	34.2360829389111	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGCCTGTGATGCCT	392	False	NA	NA	False	NA	NA	NA	58462430	58431580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58443841_58443896_58444551_58444891_58447949_58448224_58462304
tx.25134	chr9	-	6929	27	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	3	-147	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	31.1069209749917	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTGGTCAAAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	58943721	58782116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
tx.25135	chr9	-	4494	13	ISM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	127926	-1868	-14565	0	3prime_fragment	FALSE	canonical	3	116	junction_5	13.3132661490543	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAAAGATGTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	58815782	58781969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686
tx.25136	chr9	+	2658	23	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	12.3533546820621	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGATCACTGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	59524545	59557566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
tx.25137	chr9	+	10562	43	FSM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	-29	1665	-29	-1665	multi-exon	TRUE	canonical	3	21	junction_5	14.12370436335	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATTTTTTAATCAT	526	False	NA	NA	False	NA	NA	NA	59658149	59834484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
tx.25139	chr9	+	5471	10	ISM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	149453	9	3825	-9	3prime_fragment	FALSE	canonical	3	44	junction_8	13.4998856876733	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGCAATATGTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	59807631	59836140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
tx.2514	chr11	+	2200	7	FSM	ENSMUSG00000020458.17	ENSMUST00000078830.11	3615	7	0	1415	0	0	multi-exon	FALSE	canonical	3	504	junction_1	153.756029692063	614	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29642946	29692916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_29643694_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
tx.25140	chr9	-	4532	11	ISM	ENSMUSG00000032289.16	ENSMUST00000034829.6	4816	12	84191	24	-55441	-24	3prime_fragment	FALSE	canonical	2	3	junction_8	4.19642705167146	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGTCTCCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	59964312	59877025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133
tx.25141	chr9	+	4364	18	NNC	ENSMUSG00000032280.17	novel	4065	19	NA	NA	-39	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	64.214605588871	8	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTGATTGTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	61280914	61325770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
tx.25142	chr9	-	1540	2	FSM	ENSMUSG00000046846.5	ENSMUST00000056949.5	3042	2	-17	1519	-17	-1519	multi-exon	FALSE	canonical	3	9	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTAGTTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	62189507	62179529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_62180846_62189283
tx.25143	chr9	-	2208	23	NNC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	197	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	24.1763920774854	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	63284962	63071050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63238263_63238385_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
tx.25144	chr9	+	5018	12	ISM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	85205	0	7585	0	3prime_fragment	FALSE	canonical	3	12	junction_3	5.41195493314081	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGATAATTATTATTTAT	112	False	NA	NA	False	NA	NA	NA	64803826	64826949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
tx.25145	chr9	+	3925	19	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	9	3387	9	-1598	intron_retention	FALSE	canonical	3	89	junction_17	13.1182889956289	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTTTTAGCCAAGCGGA	NA	False	NA	NA	False	NA	NA	NA	64939704	64986546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244
tx.25146	chr9	-	173	2	Intergenic	novelGene_380	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTCACTTCCAGGCAG	8209	False	NA	NA	False	NA	NA	NA	65491704	65489378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_-_65489458_65491610
tx.25147	chr9	+	3313	3	NIC	ENSMUSG00000041064.15	novel	2450	4	NA	NA	1	744	intron_retention	FALSE	canonical	3	99	junction_1	4.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494475	65498518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_65495677_65496286_65497110_65497229
tx.25148	chr9	+	7230	14	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	7.4269619168008	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGTTTCATTAGCTG	NA	False	NA	NA	False	NA	NA	NA	65816261	65952297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_65816451_65828285_65828351_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
tx.25149	chr9	+	5771	2	NIC	ENSMUSG00000032383.8	novel	892	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	2090	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTGGGCTGTGTT	1574	False	NA	NA	False	NA	NA	NA	65967512	65973906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_65972954_65973576
tx.2515	chr11	+	4616	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	2	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	355.342066711781	573	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29642948	29692916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
tx.25150	chr9	-	2569	6	NIC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	-59	0	intron_retention	TRUE	canonical	1	2	junction_3	1.85472369909914	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTCATTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	65977060	65972457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_65974502_65974794_65974863_65975408_65975504_65975967_65976073_65976455_65976540_65976887
tx.25151	chr9	-	2605	6	FSM	ENSMUSG00000032375.16	ENSMUST00000034934.15	4910	6	-7	2312	-7	1679	multi-exon	FALSE	canonical	1	1	junction_5	4.70744091837593	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGGAGAACCTGAGAATT	NA	False	NA	NA	False	NA	NA	NA	66702779	66684795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_66686663_66691799_66691928_66696927_66697051_66697879_66697951_66701351_66701523_66702534
tx.25152	chr9	-	4348	6	NNC	ENSMUSG00000053040.14	novel	5205	6	NA	NA	13	-1301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.76194411635517	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCATTTTCATTACTGT	NA	False	NA	NA	False	NA	NA	NA	66741995	66723576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741310
tx.25153	chr9	-	1990	6	FSM	ENSMUSG00000032370.9	ENSMUST00000034929.7	2031	6	41	0	-23	0	multi-exon	FALSE	canonical	3	42	junction_2	9.68710483064987	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGCACTTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	66882725	66862674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_66863483_66874960_66875127_66877863_66878219_66878457_66878649_66881999_66882067_66882322
tx.25154	chr9	-	8730	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74351	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_58	17.5065895526389	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTGTTTCAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	67541336	67127934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466986_67541172
tx.25155	chr9	+	4996	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-48	intron_retention	FALSE	canonical	3	101	junction_2	12.7769323391806	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTGTCATTTCA	4669	False	NA	NA	False	NA	NA	NA	69305204	69340356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
tx.25156	chr9	-	4185	2	ISM	ENSMUSG00000032226.6	ENSMUST00000034751.6	4301	3	1114	0	1114	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGCGGAGTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	69944256	69938777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_69942621_69943914
tx.25157	chr9	-	2765	3	ISM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	77	34208	77	2246	5prime_fragment	FALSE	canonical	3	239	junction_2	2.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGATGCTTTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	70048783	70030000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_70032480_70033468_70033566_70048594
tx.25158	chr9	+	4422	23	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.378186534506	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGTTTGGCTAGCCTG	NA	False	NA	NA	False	NA	NA	NA	72182291	72271060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205963_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
tx.25159	chr9	+	2037	11	NNC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	-42	-3451	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.7927228926065	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCAGAATTAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72345250	72365856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_72345397_72345724_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
tx.2516	chr11	+	3367	7	ISM	ENSMUSG00000020458.17	ENSMUST00000102841.8	4060	9	13083	0	-11706	0	3prime_fragment	FALSE	canonical	3	386	junction_1	197.502250338797	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29656856	29692916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
tx.25160	chr9	+	1225	7	NIC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	26	-3444	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	33.4535332795938	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGTCATTTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	72345842	72365863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72359862_72360121_72364059_72364186_72365594
tx.25161	chr9	-	4748	10	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-3	0	intron_retention	FALSE	canonical	2	9	junction_5	66.6907363956019	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGTTTGCTATTTGTA	7873	False	NA	NA	False	NA	NA	NA	72399246	72367001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
tx.25162	chr9	+	5098	10	NNC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-16	-2641	intron_retention	FALSE	canonical	3	23	junction_1	67.8802504051195	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTGGGTCTTTATTTT	661	False	NA	NA	False	NA	NA	NA	72439505	72527470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_72439940_72440096_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
tx.25163	chr9	+	1843	8	NNC	ENSMUSG00000037674.16	novel	1457	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	65.8461410085229	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTGATTACCTGGTTTT	663	False	NA	NA	False	NA	NA	NA	72439507	72519705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_72439940_72440096_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
tx.25164	chr9	+	7147	11	ISM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	49791	0	49791	0	3prime_fragment	FALSE	canonical	3	17	junction_2	5.6	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72763946	72824573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
tx.25165	chr9	+	2326	3	FSM	ENSMUSG00000034910.6	ENSMUST00000038489.6	7916	3	-574	6164	-574	-6164	multi-exon	FALSE	canonical	2	7	junction_2	1	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAAAAGCCTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	72832352	72853299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_72833243_72850201_72850288_72851949
tx.25166	chr9	-	901	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	7	-197	7	197	multi-exon	FALSE	canonical	3	81	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAATAAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	72892651	72886806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_72887479_72892422
tx.25167	chr9	+	3494	6	NNC	ENSMUSG00000032202.12	novel	3168	7	NA	NA	18732	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.08330601085553	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAATAAAAAAAAATA	757	False	NA	NA	False	NA	NA	NA	72970997	73004868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_72971674_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
tx.25168	chr9	+	3701	5	FSM	ENSMUSG00000034593.17	ENSMUST00000136871.2	1919	5	-44	-1738	-26	1738	multi-exon	FALSE	canonical	3	52	junction_1	5.33853912601566	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCACCTGTTGAACAGTT	2307	False	NA	NA	False	NA	NA	NA	74978443	75040028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253
tx.25169	chr9	+	6745	41	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_31	11.9167686475823	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5131	False	NA	NA	False	NA	NA	NA	75139304	75212733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196319_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
tx.2517	chr11	-	5190	21	ISM	ENSMUSG00000020315.19	ENSMUST00000011877.13	8238	35	82338	-1	-26075	0	3prime_fragment	FALSE	canonical	3	357	junction_17	82.5287222729154	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	NA	False	NA	NA	False	NA	NA	NA	30087434	30049394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873
tx.25170	chr9	+	3594	4	ISM	ENSMUSG00000033590.9	ENSMUST00000216788.2	4782	30	-35	38279	-11	-9047	5prime_fragment	FALSE	canonical	3	45	junction_2	8.9566858950296	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAGATA	5149	False	NA	NA	False	NA	NA	NA	75139322	75156601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419
tx.25171	chr9	-	4090	5	FSM	ENSMUSG00000032344.18	ENSMUST00000070742.14	4049	5	-33	-8	0	8	multi-exon	FALSE	canonical	1	6	junction_4	3.56195171219375	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATGTATCAGTCTTAG	5240	False	NA	NA	False	NA	NA	NA	78350519	78337799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_78340550_78341594_78341698_78342722_78342966_78344584_78344805_78349745
tx.25172	chr9	+	169	2	Antisense	novelGene_ENSMUSG00000076138.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATCTTTAAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	78383421	78421907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_+_78383568_78421884
tx.25173	chr9	-	4805	2	FSM	ENSMUSG00000049511.6	ENSMUST00000183482.2	4724	2	-83	2	-83	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTTAGTAGTAGTTCT	NA	False	NA	NA	False	NA	NA	NA	81515964	81510345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_81514925_81515738
tx.25174	chr9	-	10476	41	NIC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	-9	-262	combination_of_known_junctions	FALSE	canonical	1	2	junction_26	14.6696114467971	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTGTAGAGCCTCAT	NA	False	NA	NA	False	NA	NA	NA	82857488	82748473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82798014_82798078_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
tx.25175	chr9	-	4163	9	NIC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	10.5948100502085	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	83323146	83275471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83310932_83311002_83323093
tx.25176	chr9	+	4418	8	ISM	ENSMUSG00000032263.15	ENSMUST00000190166.7	1398	11	36692	1	36692	0	3prime_fragment	FALSE	canonical	3	616	junction_7	43.4276315687774	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	960	False	NA	NA	False	NA	NA	NA	83867525	84006292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
tx.25177	chr9	-	5636	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_19	38.9746614442496	57	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTAGCGTGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	85631375	85569411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604503_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
tx.25178	chr9	+	8529	37	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	3	-484	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	4.02423215588321	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGTGGTCTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	86349234	86437373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
tx.25179	chr9	+	7820	37	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	4.41893722209758	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTTGGTCTCAAGCC	NA	False	NA	NA	False	NA	NA	NA	86349244	86436677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394613_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
tx.2518	chr11	-	8575	35	NIC	ENSMUSG00000020315.19	novel	8461	36	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	341	junction_32	94.310427564532	487	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	1824	False	NA	NA	False	NA	NA	NA	30148253	30049394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
tx.25180	chr9	+	1375	3	FSM	ENSMUSG00000032417.11	ENSMUST00000034988.10	1355	3	-20	0	5	0	multi-exon	FALSE	canonical	3	7	junction_1	22.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTGTCTCAAGTCCAA	NA	False	NA	NA	False	NA	NA	NA	86454048	86456952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_86454271_86454889_86455117_86456026
tx.25181	chr9	-	4133	5	ISM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	51485	0	5859	0	3prime_fragment	FALSE	canonical	3	67	junction_2	2.8613807855649	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTTTTGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	87086104	87071629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693
tx.25182	chr9	-	4595	26	ISM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	1486	2818	1238	-2818	3prime_fragment	FALSE	canonical	3	45	junction_14	9.16951470907812	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCGGAAATCAGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	87136103	87074447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984
tx.25183	chr9	-	2554	5	FSM	ENSMUSG00000097177.9	ENSMUST00000181448.3	602	5	1	-1953	1	866	multi-exon	FALSE	canonical	3	17	junction_4	50.4746223363781	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGCTTAATTCACTG	NA	False	NA	NA	False	NA	NA	NA	88740922	88737331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_88739637_88739866_88739925_88740278_88740354_88740442_88740498_88740861
tx.25184	chr9	-	5789	14	NIC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	12	-20	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	19.0868460544872	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGTGTAGTCATTTGTG	NA	False	NA	NA	False	NA	NA	NA	90152845	90084099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404_90152552_90152721
tx.25185	chr9	-	5654	13	NIC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	-4	-24	combination_of_known_splicesites	FALSE	canonical	2	4	junction_12	18.7387002988171	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTAGGTGTAGTCATT	NA	False	NA	NA	False	NA	NA	NA	90152861	90084103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152721
tx.25186	chr9	-	7448	26	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	217.799298437805	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACTTGGTGTGCTCTGT	8294	False	NA	NA	False	NA	NA	NA	95393946	95338951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95393869
tx.25187	chr9	-	4423	12	NIC	ENSMUSG00000032839.14	novel	2912	12	NA	NA	11	-2	combination_of_known_junctions	TRUE	canonical	0	0	junction_9	2.86904251601082	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGATAGAGCTTGAGC	NA	False	NA	NA	False	NA	NA	NA	95632400	95587136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_95589021_95590253_95590449_95590698_95590901_95592168_95592345_95598135_95598280_95599572_95599713_95603185_95603523_95605147_95605344_95608477_95608589_95614059_95614263_95625249_95625405_95631720
tx.25188	chr9	+	10224	42	NNC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	-3	-3	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_40	10.8501775727909	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACACTGCTGCTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	95836809	95939853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
tx.25189	chr9	+	7587	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	5	-11	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	149.746214940108	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAATAATGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	96078332	96205688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96113783_96113853_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.2519	chr11	-	8477	36	FSM	ENSMUSG00000020315.19	ENSMUST00000006629.14	8461	36	-16	0	-10	0	multi-exon	FALSE	canonical	3	15	junction_35	139.777607619521	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	1503	False	NA	NA	False	NA	NA	NA	30218185	30049394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30169578_30169773_30217947
tx.25190	chr9	+	7253	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-5	-30	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	125.257618827679	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATACAGAAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	96078322	96205669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_96078614_96084183_96084242_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.25191	chr9	-	844	8	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	1	-7967	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	17.5324771524745	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTAGTCTTTTTTCATA	NA	False	NA	NA	False	NA	NA	NA	96513588	96461907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_96462029_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
tx.25192	chr9	-	2664	3	FSM	ENSMUSG00000046997.6	ENSMUST00000055433.5	2720	3	56	0	-23	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTGTAAAGTGCTCTA	NA	False	NA	NA	False	NA	NA	NA	96900840	96825534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_96826758_96877627_96878475_96900246
tx.25193	chr9	+	2158	16	FSM	ENSMUSG00000056267.15	ENSMUST00000191335.7	2120	16	-30	-8	-9	8	multi-exon	TRUE	canonical	3	165	junction_10	76.0584570504089	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTGGATTATAACATATAA	NA	False	NA	NA	False	NA	NA	NA	99125485	99180046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631
tx.25194	chr9	+	5302	3	FSM	ENSMUSG00000066415.5	ENSMUST00000189616.2	2612	3	-77	-2613	-77	-402	multi-exon	FALSE	canonical	2	3	junction_1	1.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTAGAATACTGAGGAG	NA	False	NA	NA	False	NA	NA	NA	100956076	100981597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_100957474_100957932_100958010_100977769
tx.25195	chr9	-	5537	13	ISM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	39435	-87	-523	87	3prime_fragment	FALSE	canonical	3	23	junction_1	6.16216051577872	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAAATCCTGAGGAGTG	NA	False	NA	NA	False	NA	NA	NA	101089559	100982195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329
tx.25196	chr9	+	3747	12	NNC	ENSMUSG00000032548.15	novel	7122	14	NA	NA	45884	-2602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.48136637958772	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTGTAAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	102931581	102965048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_102931824_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
tx.25197	chr9	-	1741	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.1596624119289	129	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGAAAGCATTGAGTCA	NA	False	NA	NA	False	NA	NA	NA	103079324	103066294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_103066653_103066899_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
tx.25198	chr9	-	3921	5	FSM	ENSMUSG00000032803.16	ENSMUST00000189896.2	1023	5	-52	-2846	-52	0	multi-exon	FALSE	canonical	3	61	junction_1	184.859913177519	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	NA	False	NA	NA	NA	103242870	103230302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_103233226_103233478_103233639_103237074_103237218_103241173_103241251_103242252
tx.25199	chr9	-	7832	57	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-31	-320	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	46.7717536422947	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	104140160	104028800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_104029623_104030466_104030576_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
tx.252	chr1	-	5028	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-35	-226	-22	-3	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTCCGAAGTCTTCGT	NA	False	NA	NA	False	NA	NA	NA	51955122	51788926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
tx.2520	chr11	-	676	3	NNC	ENSMUSG00000060923.6	novel	863	4	NA	NA	183	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.5	9	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTTGTGTACTGTTGC	NA	False	NA	NA	False	NA	NA	NA	30599404	30455993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_30456440_30582207_30582334_30599300
tx.25200	chr9	+	9712	3	NNC	ENSMUSG00000032563.17	novel	995	6	NA	NA	-3	1044	intron_retention	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	104930465	104940379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_104934748_104934857_104938352_104938443
tx.25201	chr9	-	1708	9	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	23	-2	intron_retention	FALSE	canonical	3	6	junction_6	42.7505482420986	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTTCTCTCTCTTT	3866	False	NA	NA	False	NA	NA	NA	106076451	106072151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074940_106075196_106075299_106075424_106076168
tx.25202	chr9	-	4305	21	ISM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	17	7144	-1	-6436	5prime_fragment	FALSE	canonical	3	17	junction_9	7.46240577829965	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGCAAACAAACAAAAAAT	7312	False	NA	NA	False	NA	NA	NA	106666376	106572424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
tx.25203	chr9	-	1212	10	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	6	12	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	55.2618905142583	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCATGGGCCCTCGTT	NA	False	NA	NA	False	NA	NA	NA	107215543	107204878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107215479
tx.25204	chr9	-	2425	10	ISM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	63	606	14	2	intron_retention	FALSE	canonical	3	133	junction_9	21.7346511756779	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTATTAACATTCATG	NA	False	NA	NA	False	NA	NA	NA	107215486	107204888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199
tx.25205	chr9	+	2682	6	FSM	ENSMUSG00000037977.7	ENSMUST00000042581.4	2599	6	-88	5	-88	-5	multi-exon	FALSE	canonical	1	2	junction_1	1.32664991614216	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATTGGAGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	107217712	107226886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107217988_107218509_107218617_107219405_107219789_107223344_107223371_107224016_107224165_107225143
tx.25206	chr9	-	1137	4	FSM	ENSMUSG00000037190.13	ENSMUST00000194967.2	658	4	-12	-467	-12	0	multi-exon	FALSE	canonical	3	15	junction_2	45.536310297998	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGGGAGGAGCAGCGC	NA	False	NA	NA	False	NA	NA	NA	107419338	107416773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_107417585_107418201_107418269_107418695_107418850_107419233
tx.25207	chr9	+	1643	10	NIC	ENSMUSG00000010057.9	novel	1441	11	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	98	junction_4	12.0102836594415	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTGAGTACTGCTTCA	NA	False	NA	NA	False	NA	NA	NA	107419432	107422902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422587_107422689
tx.25208	chr9	+	1732	4	NNC	ENSMUSG00000010054.5	novel	1665	3	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	113.067334903686	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGAGTGGCGTCCAGT	NA	False	NA	NA	False	NA	NA	NA	107440464	107443310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_107440732_107441066_107441146_107441774_107441896_107442045
tx.25209	chr9	+	4301	2	ISM	ENSMUSG00000010051.16	ENSMUST00000112387.9	2706	5	20	-11	9	11	intron_retention	FALSE	canonical	3	34	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454145	107458920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_107454278_107454751
tx.2521	chr11	+	6453	47	FSM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	36	2	36	-2	multi-exon	TRUE	canonical	2	239	junction_13	60.0854464039772	446	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	30721761	30830359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
tx.25210	chr9	-	3822	18	NIC	ENSMUSG00000034684.13	novel	3395	18	NA	NA	24	1	combination_of_known_junctions	TRUE	canonical	2	8	junction_13	3.78121380705605	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTCTCTCCTTGGT	9858	False	NA	NA	False	NA	NA	NA	107587194	107558697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
tx.25211	chr9	+	1463	10	NIC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1655374700484	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	NA	False	NA	NA	NA	107926430	107928901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
tx.25212	chr9	-	4323	38	ISM	ENSMUSG00000041528.16	ENSMUST00000162355.8	4727	39	1306	0	274	0	3prime_fragment	FALSE	canonical	3	25	junction_17	14.1729894654284	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	107955194	107928870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920
tx.25213	chr9	-	3845	35	NIC	ENSMUSG00000041528.16	novel	3789	35	NA	NA	-35	23	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	15.5326701127156	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCGGGTGTCAATAGCA	NA	False	NA	NA	False	NA	NA	NA	107956539	107933074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
tx.25214	chr9	-	3417	5	NIC	ENSMUSG00000032609.13	novel	2956	11	NA	NA	16	0	intron_retention	FALSE	canonical	3	5	junction_4	3.03108891324554	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGGGGTTTCTTTG	9968	False	NA	NA	False	NA	NA	NA	108329984	108324834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108328591_108329515
tx.25215	chr9	+	1347	5	NIC	ENSMUSG00000032599.13	novel	730	4	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	45.778679535347	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATGTGTCTTGTAGT	NA	False	NA	NA	False	NA	NA	NA	108660997	108675186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_108661070_108673262_108673596_108673739_108673772_108673853_108673983_108674405
tx.25216	chr9	+	3898	12	ISM	ENSMUSG00000023473.14	ENSMUST00000024238.11	11547	35	16854	6	-61	-6	3prime_fragment	FALSE	canonical	0	0	junction_4	3.17271424847548	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTTGTTCCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	108720372	108730162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_108720500_108720742_108720918_108721124_108721238_108721661_108721742_108722243_108722368_108722900_108723018_108723112_108723262_108723518_108723629_108723906_108724066_108724743_108724945_108725794_108726675_108728499
tx.25217	chr9	+	3492	13	ISM	ENSMUSG00000053646.14	ENSMUST00000072093.13	8649	38	16587	20	5182	-20	3prime_fragment	FALSE	canonical	2	13	junction_4	3.27766007321619	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACCACTTCAGAGAGGAA	3993	False	NA	NA	False	NA	NA	NA	108941043	108948965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
tx.25218	chr9	+	5608	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	84.1275189600096	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	109760887	109913014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
tx.25219	chr9	+	2138	8	NNC	ENSMUSG00000054836.13	novel	2219	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	63.5539301760035	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTGTGTGTGTGTTCCT	2205	False	NA	NA	False	NA	NA	NA	110134263	110151170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_110134418_110137258_110137337_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
tx.2522	chr11	-	1907	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	-203	828	-20	149	multi-exon	TRUE	canonical	2	57	junction_8	15.3746121325012	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTCACTTCATTCA	NA	False	NA	NA	False	NA	NA	NA	30904355	30881601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
tx.25220	chr9	-	4554	10	FSM	ENSMUSG00000054792.16	ENSMUST00000198164.5	4538	10	-12	-4	-7	2	multi-exon	FALSE	canonical	1	3	junction_4	2.46956786343254	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTTTCCTGATTGTG	1951	False	NA	NA	False	NA	NA	NA	110305769	110254991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265317_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
tx.25221	chr9	+	1708	8	Fusion	ENSMUSG00000049719.15_ENSMUSG00000047257.14	novel	1232	6	NA	NA	14	-2	multi-exon	TRUE	canonical	0	0	junction_4	0.989743318610787	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTGTGCCTTCTCTGA	1978	False	NA	NA	False	NA	NA	NA	110663669	110685582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr9_+_110663808_110665133_110665161_110667488_110667637_110668089_110668365_110678694_110678873_110679063_110679327_110680382_110680547_110685067
tx.25222	chr9	+	1494	5	FSM	ENSMUSG00000048752.8	ENSMUST00000051097.6	1456	5	-38	0	-38	0	multi-exon	FALSE	canonical	3	8	junction_3	2.54950975679639	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTCCTTTCTGAGCC	NA	False	NA	NA	False	NA	NA	NA	110686996	110693697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_110687528_110690327_110690491_110691329_110691614_110692797_110692965_110693348
tx.25223	chr9	+	5087	27	FSM	ENSMUSG00000044037.16	ENSMUST00000130386.8	5056	27	-31	0	1	0	multi-exon	FALSE	canonical	3	8	junction_1	6.41374264174641	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	NA	False	NA	NA	NA	110709242	110729598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_110709298_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
tx.25224	chr9	+	5241	27	NIC	ENSMUSG00000044037.16	novel	5150	27	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	6.69109184357617	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	110709312	110729597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_110709526_110711781_110711892_110713085_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
tx.25225	chr9	-	866	2	Antisense	novelGene_ENSMUSG00000106234.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTTCAGGAAATGAAGG	NA	False	NA	NA	False	NA	NA	NA	110808715	110798435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_-_110799208_110808621
tx.25226	chr9	+	4419	2	FSM	ENSMUSG00000046785.9	ENSMUST00000200053.2	578	2	-2287	-1554	-114	2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTGTCTTTCAGTG	NA	False	NA	NA	False	NA	NA	NA	111100882	111108163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_111103596_111106457
tx.25227	chr9	+	10711	22	FSM	ENSMUSG00000062296.9	ENSMUST00000078626.8	10520	22	-191	0	-191	0	multi-exon	FALSE	canonical	0	0	junction_4	1.67142178807469	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTCTTTTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	111140615	111224843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_111141320_111162765_111162893_111172162_111172314_111174462_111174582_111176536_111176621_111176855_111176995_111178343_111178476_111181141_111181313_111191325_111191581_111193012_111193190_111193742_111196617_111202013_111202214_111202475_111202614_111206845_111206990_111207877_111208035_111212141_111212231_111215438_111215543_111215639_111215773_111218225_111218372_111219014_111222065_111222825_111222925_111223325
tx.25228	chr9	+	2479	3	NIC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	28973	490	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGATGGGGTGTGTCAT	7219	False	NA	NA	False	NA	NA	NA	111297121	111318676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_111298384_111311685_111311819_111317592
tx.25229	chr9	+	6444	37	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-21	13	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	49.1547929793169	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	113570519	113748763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_113570944_113590657_113590737_113594991_113595117_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
tx.2523	chr11	+	1965	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	30	1233	6	138	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCTGGATGTGACTT	NA	False	NA	NA	False	NA	NA	NA	30904424	31051471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
tx.25230	chr9	+	5123	14	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	206	5	intron_retention	FALSE	canonical	3	224	junction_7	64.6973838674327	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATTCATTATCAGGT	1508	False	NA	NA	False	NA	NA	NA	113760207	113806074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
tx.25231	chr9	+	5975	11	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	24987	0	24955	0	3prime_fragment	FALSE	canonical	3	319	junction_2	36.8570210407732	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGTCCTGTCATTAA	NA	False	NA	NA	False	NA	NA	NA	114255130	114303445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
tx.25232	chr9	-	7095	2	ISM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	48499	7	48499	-7	3prime_fragment	FALSE	canonical	3	18	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTTGGTGTCCGTG	NA	False	NA	NA	False	NA	NA	NA	114344938	114336207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_114343165_114344800
tx.25233	chr9	+	3505	11	NIC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-175	1043	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	22.127132665576	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTTGTGTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	114807461	115062336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
tx.25234	chr9	+	3306	13	NNC	ENSMUSG00000040875.13	novel	2158	12	NA	NA	19	1031	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.9374246986859	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTCGATTAAATACTC	NA	False	NA	NA	False	NA	NA	NA	114819834	115062324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_114819891_114836506_114836643_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
tx.25235	chr9	-	4599	7	FSM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	112	-1235	17	1235	multi-exon	FALSE	canonical	1	1	junction_6	1.95078331845327	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCCTCTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	116004316	115916761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960612_115960782_116004011
tx.25236	chr9	+	4671	8	FSM	ENSMUSG00000047409.14	ENSMUST00000073109.12	4589	8	39	-121	39	121	multi-exon	FALSE	canonical	0	0	junction_2	3.56284683238284	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCGTGGTTGATCTGC	NA	False	NA	NA	False	NA	NA	NA	118755559	118873187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_118756009_118840302_118840458_118849079_118849113_118856004_118856107_118859263_118859321_118862603_118862697_118866428_118866615_118869591
tx.25237	chr9	-	2170	12	ISM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	11968	28	-1990	-28	3prime_fragment	FALSE	canonical	3	27	junction_4	6.22445191586316	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATAATAATCAC	NA	False	NA	NA	False	NA	NA	NA	118905361	118900622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151
tx.25238	chr9	-	1662	12	FSM	ENSMUSG00000010651.5	ENSMUST00000010795.5	1689	12	24	3	24	-3	multi-exon	TRUE	canonical	2	3	junction_6	59.9400526973023	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCAGGGTCCAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	118986137	118977093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_118977482_118977801_118977948_118978029_118978086_118978338_118978519_118978667_118978859_118979891_118979973_118980883_118980983_118982737_118982781_118982993_118983074_118984812_118984871_118985658_118985753_118985891
tx.25239	chr9	+	3303	4	FSM	ENSMUSG00000032517.17	ENSMUST00000093773.8	3286	4	-14	-3	11	3	multi-exon	FALSE	canonical	3	11	junction_3	4.18993502999218	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTATTTGCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	119978793	120005160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_120002216
tx.2524	chr11	-	1287	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	-28	-241	-12	-4	multi-exon	FALSE	canonical	3	22	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTCTCTAAGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	30936362	30926710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_30927747_30936111
tx.25240	chr9	+	1497	4	FSM	ENSMUSG00000032517.17	ENSMUST00000068698.15	1536	4	36	3	1	-3	multi-exon	FALSE	canonical	3	15	junction_3	2.44948974278318	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTTGGTGGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	119978808	119998441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_119997288
tx.25241	chr9	+	553	3	FSM	ENSMUSG00000032526.12	ENSMUST00000215104.2	315	3	-68	-170	3	3	multi-exon	FALSE	canonical	2	7	junction_1	206	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCCCATGTCAACTAAT	NA	False	NA	NA	False	NA	NA	NA	121539397	121541990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121539514_121539704_121539782_121541630
tx.25242	chr9	+	698	2	FSM	ENSMUSG00000032526.12	ENSMUST00000214535.2	1175	2	8	469	1	-2	multi-exon	FALSE	canonical	3	419	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTGTCCCATGTCAA	NA	False	NA	NA	False	NA	NA	NA	121539438	121541985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121539782_121541630
tx.25243	chr9	+	4733	17	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-9	185	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	12.6859604977313	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATAATTTGCAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	121548271	121583647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
tx.25244	chr9	+	5649	5	NNC	ENSMUSG00000032525.16	novel	539	6	NA	NA	-2321	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	17.9495821678389	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTGGTCTTTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	121577159	121585908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
tx.25245	chr9	+	5281	5	ISM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	29283	1	-1956	-1	3prime_fragment	FALSE	canonical	3	27	junction_3	12.5399362039845	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTGGTCTTTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	121577524	121585908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
tx.25246	chr9	+	4791	6	FSM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	-33	0	4	0	multi-exon	FALSE	canonical	2	8	junction_1	10.6695829346793	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGTCTGTGTTCCTTTT	8223	False	NA	NA	False	NA	NA	NA	121946335	121998768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_121946474_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
tx.25247	chr9	+	5006	6	NIC	ENSMUSG00000063488.7	novel	4722	5	NA	NA	1143	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	2.92574776766556	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGCTCTCGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	122715892	122727682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_122716131_122717488_122718015_122719723_122719872_122721382_122721457_122721749_122721844_122723756
tx.25248	chr9	+	3783	3	NIC	ENSMUSG00000057895.12	novel	2010	4	NA	NA	11	-5	intron_retention	FALSE	canonical	3	65	junction_2	7	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTTTGTTTTAAC	4885	False	NA	NA	False	NA	NA	NA	122752147	122760088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_122754362_122755374_122755520_122758664
tx.25249	chr9	-	5067	9	ISM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	2200	-1096	2103	1096	3prime_fragment	FALSE	canonical	3	93	junction_4	7.36439916082772	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACTCTAAAAACAGCTC	NA	False	NA	NA	False	NA	NA	NA	123544490	123524980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364
tx.2525	chr11	-	1323	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	-11	3	-11	-3	multi-exon	FALSE	canonical	3	30	junction_1	6	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTCTAAGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	30936361	30926709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_30927747_30929564_30929601_30936111
tx.25250	chrUn_MU069435v1	-	888	2	Intergenic	novelGene_396	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	7357	4380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrUn_MU069435v1_-_4528_6616
tx.25251	chrX	-	3439	4	FSM	ENSMUSG00000039556.17	ENSMUST00000115742.9	3066	4	-23	-350	12	350	multi-exon	FALSE	canonical	2	7	junction_3	1.4142135623731	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAACACAATATATT	NA	False	NA	NA	False	NA	NA	NA	7440510	7424840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7427123_7430100_7430181_7430474_7430528_7439486
tx.25252	chrX	-	2627	3	ISM	ENSMUSG00000031150.14	ENSMUST00000033490.13	3658	10	5898	0	-1539	0	3prime_fragment	TRUE	canonical	3	40	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	3706	False	NA	NA	False	NA	NA	NA	7601682	7597952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_7600338_7601310_7601410_7601539
tx.25253	chrX	+	5167	7	NNC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	-360	-591	intron_retention	FALSE	canonical	0	0	junction_5	11.1417632755722	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGCATCTACTGACTC	NA	False	NA	NA	False	NA	NA	NA	7688167	7703928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7701719_7701831_7702504
tx.25254	chrX	-	2783	5	FSM	ENSMUSG00000039231.19	ENSMUST00000150095.8	2807	5	18	6	18	3	multi-exon	FALSE	canonical	3	87	junction_4	11.6054943884352	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGAGATTTGGGAGATT	7010	False	NA	NA	False	NA	NA	NA	7940842	7927670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_7929223_7929934_7930297_7936826_7937490_7938561_7938708_7940782
tx.25255	chrX	-	4831	8	ISM	ENSMUSG00000031166.14	ENSMUST00000033506.13	4183	9	11	2	11	0	intron_retention	FALSE	canonical	3	33	junction_5	3.69776545872708	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGCCTCTCTTCATT	6932	False	NA	NA	False	NA	NA	NA	7999036	7989541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623
tx.25256	chrX	-	6063	3	NIC	ENSMUSG00000031167.17	novel	1274	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1172	junction_2	71.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGTTACACGTATG	6559	False	NA	NA	False	NA	NA	NA	8011938	8005214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_8009991_8010086_8011312_8011876
tx.25257	chrX	+	5006	11	ISM	ENSMUSG00000037369.18	ENSMUST00000225336.2	3219	17	12457	-635	11235	-419	3prime_fragment	FALSE	canonical	3	180	junction_1	25.8079445132696	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	18124991	18145756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
tx.25258	chrX	-	683	2	NNC	ENSMUSG00000037341.15	novel	2512	17	NA	NA	2	-59300	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTGTAGTATATGTC	NA	False	NA	NA	False	NA	NA	NA	20158044	20090054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_20090292_20157598
tx.25259	chrX	+	4162	19	NIC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	-22	7	intron_retention	FALSE	canonical	0	0	junction_1	16.0524795207916	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGATTGTCTTAATTT	NA	False	NA	NA	False	NA	NA	NA	23559267	23672236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_23559779_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
tx.2526	chr11	-	5200	3	ISM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	2	581	2	98	intron_retention	FALSE	canonical	3	131	junction_2	15.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGTGATTAGAAATG	NA	False	NA	NA	False	NA	NA	NA	31320072	31307887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_31310529_31315331_31315544_31317725
tx.25260	chrX	-	4146	2	ISM	ENSMUSG00000044149.8	ENSMUST00000057093.8	3264	3	11201	-1103	11201	1099	3prime_fragment	FALSE	canonical	3	11	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAGGCTTTGTGATAAA	NA	False	NA	NA	False	NA	NA	NA	36155351	36150093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_36154166_36155277
tx.25261	chrX	-	2378	10	FSM	ENSMUSG00000050379.16	ENSMUST00000060474.14	3457	10	162	917	-3	-917	multi-exon	TRUE	canonical	3	7	junction_1	15.297865581774	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCATGATCTGCTCCC	NA	False	NA	NA	False	NA	NA	NA	36253147	36175895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36176908_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
tx.25262	chrX	-	2098	11	NNC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-3	-801	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	21.2388794431345	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	NA	NA	NA	36253147	36179484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_36180199_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
tx.25263	chrX	+	715	4	NNC	ENSMUSG00000079637.11	novel	762	4	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	20.3141986469235	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	36635297	36640033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_36635407_36635568_36635981_36637508_36637555_36639885
tx.25264	chrX	+	808	4	FSM	ENSMUSG00000096788.9	ENSMUST00000072167.10	799	4	-8	-1	-8	1	multi-exon	FALSE	canonical	3	15	junction_3	24.1246761636296	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	36712096	36723467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36723236
tx.25265	chrX	-	806	4	FSM	ENSMUSG00000079627.3	ENSMUST00000115162.2	779	4	-23	-4	-23	-4	multi-exon	FALSE	canonical	3	6	junction_3	11.2644968324772	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTGTTTTGTGCTTCT	9206	False	NA	NA	False	NA	NA	NA	36854953	36850645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36850876_36852672_36852719_36854261_36854674_36854835
tx.25266	chrX	-	3420	3	FSM	ENSMUSG00000106388.2	ENSMUST00000197804.2	322	3	-2996	-102	-2996	102	multi-exon	FALSE	canonical	3	10	junction_2	2	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTCAGGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	36864204	36857920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_36858142_36859175_36859222_36861051
tx.25267	chrX	-	2431	2	NNC	ENSMUSG00000081133.3	novel	451	3	NA	NA	-100	216	intron_retention	TRUE	canonical	2	7	junction_1	0	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGCCCTCTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	37034579	37029476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_37031443_37034114
tx.25268	chrX	+	5179	2	FSM	ENSMUSG00000048047.4	ENSMUST00000049740.3	5122	2	-60	3	-60	-3	multi-exon	FALSE	canonical	2	5	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTGAGTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	37278609	37285920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_37278960_37281091
tx.25269	chrX	+	4994	2	FSM	ENSMUSG00000048047.4	ENSMUST00000115142.3	2567	2	-67	-2360	-48	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGAGTGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	37278621	37285921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_37278786_37281091
tx.2527	chr11	-	3382	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-31	589	-31	90	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGCTCCTTGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	31320105	31307895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
tx.25270	chrX	+	4344	2	ISM	ENSMUSG00000025860.16	ENSMUST00000126375.2	487	3	111	21921	74	-2	5prime_fragment	FALSE	canonical	3	44	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTGAGGCTCAGAGTC	NA	False	NA	NA	False	NA	NA	NA	41156868	41161512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_41156934_41157233
tx.25271	chrX	+	6548	7	ISM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	302	-8	220	8	3prime_fragment	FALSE	canonical	3	60	junction_1	23.6531651628745	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	NA	False	NA	NA	NA	41157014	41198541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
tx.25272	chrX	+	5725	6	FSM	ENSMUSG00000025860.16	ENSMUST00000145065.2	5407	6	-312	-6	33	6	multi-exon	FALSE	canonical	2	7	junction_1	43.8880393729317	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTGTATTTGATT	NA	False	NA	NA	False	NA	NA	NA	41157319	41198539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_41157750_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
tx.25273	chrX	+	2991	2	Genic_Genomic	ENSMUSG00000105993.2	novel	1834	1	NA	NA	-17	1498	multi-exon	FALSE	canonical	2	5	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGCCTTTTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	41578550	41581899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_+_41580411_41580768
tx.25274	chrX	-	3019	6	FSM	ENSMUSG00000036985.13	ENSMUST00000123054.8	1388	6	-3	-1628	-3	1628	multi-exon	FALSE	canonical	3	110	junction_1	9.45304183847718	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACCTTCTACCTATCAC	NA	False	NA	NA	False	NA	NA	NA	47297545	47268942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
tx.25275	chrX	-	4736	2	ISM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	37184	4	37184	-1	3prime_fragment	FALSE	canonical	3	76	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	NA	False	NA	NA	NA	47505862	47499926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_47504324_47505523
tx.25276	chrX	+	1485	11	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.2180673730426	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	47712328	47751171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_47712386_47712550_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
tx.25277	chrX	+	1585	11	FSM	ENSMUSG00000031105.17	ENSMUST00000033431.14	1760	11	175	0	4	0	multi-exon	FALSE	canonical	1	2	junction_2	43.9708994677161	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	47712629	47751171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_47712706_47712838_47713075_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
tx.25278	chrX	+	1432	12	NIC	ENSMUSG00000031105.17	novel	1862	13	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	47.4155186089816	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	47712639	47751171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_47712706_47714472_47714518_47717012_47717061_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
tx.2528	chr11	-	3488	3	ISM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	38	0	38	0	intron_retention	FALSE	canonical	3	568	junction_1	11.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGACGATCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	31621847	31615180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_31615868_31616736_31616934_31619243
tx.25281	chrX	-	2677	2	ISM	ENSMUSG00000050029.8	ENSMUST00000053593.8	3545	3	2829	381	2829	-381	3prime_fragment	FALSE	canonical	3	105	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGAGGCTTGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	50104066	50093169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_50095628_50103847
tx.25282	chrX	+	2410	7	NNC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	-41	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	51.6462325182906	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGCCTCCTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	55777105	55838702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_55777246_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
tx.25283	chrX	+	2184	6	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	2886	0	2603	0	3prime_fragment	FALSE	canonical	3	455	junction_2	16.6541286172528	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	NA	False	NA	NA	NA	56101860	56112543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
tx.25284	chrX	+	2608	10	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	-71539	877	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.66666666666667	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTTAAATTAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	59529794	59852476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_59529869_59533307_59533431_59613279_59613375_59615242_59615312_59672601_59672728_59723839_59723918_59843031_59843137_59847242_59847346_59850088_59850175_59850727
tx.25285	chrX	+	2245	3	Genic_Genomic	ENSMUSG00000083576.2	novel	1100	1	NA	NA	-57641	364	multi-exon	FALSE	canonical	2	4	junction_1	13	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTGGCTTACTA	NA	False	NA	NA	False	NA	NA	NA	61241012	61300117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_+_61241264_61249243_61249365_61298244
tx.25286	chrX	+	3126	2	Intergenic	novelGene_403	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	63977045	63982204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_63979366_63981398
tx.25287	chrX	+	1174	9	NNC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	-72	306	at_least_one_novel_splicesite	TRUE	canonical	3	104	junction_1	165.884749148317	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72192329	72202005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_72192426_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
tx.25288	chrX	-	1557	8	NIC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	11	11	combination_of_known_splicesites	FALSE	canonical	3	126	junction_6	133.486986295309	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATATGAGGTATTTGGG	NA	False	NA	NA	False	NA	NA	NA	72336571	72326490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
tx.25289	chrX	+	5960	7	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	13.6829171678492	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	NA	False	NA	NA	NA	72386186	72402686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_72386358_72388442_72388519_72394874_72394967_72395414_72395530_72396441_72396544_72396826_72396928_72397383
tx.2529	chr11	-	2267	3	FSM	ENSMUSG00000044502.17	ENSMUST00000109415.2	799	3	-141	-1327	17	21	multi-exon	FALSE	canonical	3	591	junction_1	17	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCTCAACAGAACCTTA	NA	False	NA	NA	False	NA	NA	NA	31621868	31615159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_31616934_31619243_31619369_31621500
tx.25290	chrX	-	3983	8	FSM	ENSMUSG00000002006.13	ENSMUST00000002080.12	3970	8	-12	-1	-12	1	multi-exon	FALSE	canonical	1	1	junction_1	0.699854212223765	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACTTGTGTTCATTG	NA	False	NA	NA	False	NA	NA	NA	72868587	72836963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_72839527_72839706_72839818_72839981_72840084_72840435_72840499_72841799_72841899_72842363_72842455_72843439_72843694_72867887
tx.25291	chrX	+	602	4	ISM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	966	3	-11	-3	3prime_fragment	FALSE	canonical	3	9221	junction_1	230.206187772807	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTTTTGTTTCTGATT	NA	False	NA	NA	False	NA	NA	NA	73315431	73316738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_73315514_73315784_73315924_73316277_73316441_73316520
tx.25292	chrX	+	6762	33	FSM	ENSMUSG00000031398.14	ENSMUST00000004326.4	6943	33	-8	189	-8	-183	multi-exon	TRUE	canonical	3	8	junction_6	7.59085592999894	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCATGTCTTTGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	73372663	73388106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_73372822_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
tx.25293	chrX	-	2409	3	NIC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	-13	0	intron_retention	FALSE	canonical	3	1665	junction_1	67	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	NA	False	NA	NA	NA	73412132	73409323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_73411516_73411758_73411865_73412021
tx.25294	chrX	-	2536	3	NIC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	-11	0	intron_retention	FALSE	canonical	3	1598	junction_1	100.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	NA	False	NA	NA	NA	73412130	73409323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_73411193_73411306_73411865_73412021
tx.25295	chrX	-	1869	2	FSM	ENSMUSG00000032806.14	ENSMUST00000073067.11	1910	2	43	-2	-16	2	multi-exon	FALSE	canonical	3	7	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCGGGTCCCTTCCAGT	NA	False	NA	NA	False	NA	NA	NA	73416868	73412820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_73414618_73416796
tx.25296	chrX	-	2647	6	NIC	ENSMUSG00000031200.17	novel	980	6	NA	NA	91	5598	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	21.3410402745508	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	NA	NA	NA	74459933	74448451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_74448825_74453151_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620
tx.25297	chrX	-	1770	5	FSM	ENSMUSG00000031200.17	ENSMUST00000033542.11	1592	5	-6	-172	-6	172	multi-exon	FALSE	canonical	3	22	junction_1	5.33853912601566	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTTTTGCGTTTTA	NA	False	NA	NA	False	NA	NA	NA	74460155	74453877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620
tx.25298	chrX	-	3371	2	FSM	ENSMUSG00000031202.6	ENSMUST00000033545.6	3401	2	22	8	22	-8	multi-exon	FALSE	canonical	3	5	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCCATATGTGTGTT	464	False	NA	NA	False	NA	NA	NA	74621815	74615659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_74618614_74621398
tx.25299	chrX	-	2997	2	ISM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	32096	-439	31790	439	3prime_fragment	FALSE	canonical	3	58	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	76807788	76804577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_76807498_76807711
tx.253	chr1	-	4948	30	FSM	ENSMUSG00000018417.15	ENSMUST00000046390.14	5052	30	100	4	-30	-4	multi-exon	FALSE	canonical	3	36	junction_8	59.0883173807801	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTCTCCGAAGTCTTCG	NA	False	NA	NA	False	NA	NA	NA	51955130	51788927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
tx.2530	chr11	-	1380	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	14	0	14	0	multi-exon	FALSE	canonical	3	568	junction_1	23.4141457717813	523	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGACGATCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	31621871	31615180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
tx.25300	chrX	-	4493	8	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	-4	439	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	17.4086537242199	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	76839888	76804577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76816721_76816842_76825643_76825908_76829733_76829903_76839153
tx.25301	chrX	-	3882	4	FSM	ENSMUSG00000047996.17	ENSMUST00000177904.8	3851	4	-33	2	-33	-2	multi-exon	FALSE	canonical	0	0	junction_3	7.78888096369861	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTGTTTTTCTTATA	NA	False	NA	NA	False	NA	NA	NA	77627421	77493220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_77496779_77527356_77527518_77564376_77564428_77627309
tx.25302	chrX	-	6670	18	ISM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	145	4179	-21	880	5prime_fragment	FALSE	canonical	3	125	junction_17	13.834163619279	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAGGCTCAATTAGTT	NA	False	NA	NA	False	NA	NA	NA	84820280	84749721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
tx.25303	chrX	-	1955	11	NIC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	28	-18	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	155.054474298551	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGAATTTCTCACTTA	NA	False	NA	NA	False	NA	NA	NA	92875779	92808230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_92808862_92812494_92812635_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
tx.25304	chrX	-	7254	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	385	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	37.8200922130023	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTAGTGGAGTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	93166121	93118238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93165527
tx.25305	chrX	-	6595	7	ISM	ENSMUSG00000079509.11	ENSMUST00000113926.8	6762	8	20518	0	20518	0	3prime_fragment	FALSE	canonical	3	94	junction_5	11.8836956466506	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGTGGAGTGTTGGCT	NA	False	NA	NA	False	NA	NA	NA	93145988	93118237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896
tx.25306	chrX	-	5755	16	NNC	ENSMUSG00000031214.14	novel	7170	25	NA	NA	-130121	-3	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_15	5.49181208709839	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTTTGTCTGATCTAA	NA	False	NA	NA	False	NA	NA	NA	97752216	97597885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97752071
tx.25307	chrX	-	3596	7	NNC	ENSMUSG00000015668.14	novel	1626	7	NA	NA	-3	2579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	208.783314041669	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGTGACACACTGAGTT	NA	False	NA	NA	False	NA	NA	NA	99669547	99663909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669476
tx.25308	chrX	-	2662	7	ISM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	7	152652	7	-152652	5prime_fragment	FALSE	canonical	3	66	junction_5	7.96694560181141	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGAAACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	100103266	100074139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
tx.25309	chrX	-	1536	7	NIC	ENSMUSG00000031304.19	novel	1670	8	NA	NA	27	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	12.0611866009204	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAAGAATGTCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	100311834	100307993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_100308644_100308981_100309049_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
tx.2531	chr11	+	7644	9	FSM	ENSMUSG00000020300.15	ENSMUST00000155278.2	5281	9	-2363	0	-1299	0	multi-exon	FALSE	canonical	2	5	junction_3	10.3802697460133	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTACTATACTTAT	NA	False	NA	NA	False	NA	NA	NA	31820911	31885634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_31823413_31839857_31839940_31858824_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
tx.25310	chrX	+	2564	5	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-43	1	intron_retention	FALSE	canonical	3	266	junction_2	13.1600721882519	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838218	100842249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841990_100842072
tx.25311	chrX	-	924	3	FSM	ENSMUSG00000051159.17	ENSMUST00000134887.8	607	3	14	-331	14	-2	multi-exon	FALSE	canonical	3	12	junction_2	97.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGCCTGGGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	101294538	101290988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_101291615_101292168_101292294_101294365
tx.25312	chrX	-	5926	33	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_32	13.9278273610783	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTCTGGTGTTACTGC	NA	False	NA	NA	False	NA	NA	NA	101687855	101557583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687641
tx.25313	chrX	-	246	2	ISM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	287	-7	287	7	3prime_fragment	FALSE	canonical	3	91	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTGTGTGAAATTTC	3914	False	NA	NA	False	NA	NA	NA	101730291	101729890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_101730044_101730198
tx.25314	chrX	-	7428	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	9	2	9	-2	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGCTTTTTCATCC	2382	False	NA	NA	False	NA	NA	NA	103024881	103000770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
tx.25315	chrX	+	5118	2	Antisense	novelGene_ENSMUSG00000056537.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTATTCACTGAACATT	NA	False	NA	NA	False	NA	NA	NA	103017103	103022440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chrX_+_103018556_103018774
tx.25316	chrX	-	5167	7	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-412	2763	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	10.5619863451699	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATGTGTTTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	103245203	103124556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103143231_103143288_103244238_103244478_103245114
tx.25317	chrX	-	5141	11	NIC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	247	0	combination_of_known_splicesites	TRUE	canonical	1	5	junction_8	30.7579258078304	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGTCTTTTCTATA	NA	False	NA	NA	False	NA	NA	NA	103714423	103580574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103641697_103641793_103676189_103676217_103714269
tx.25318	chrX	+	4233	9	NNC	ENSMUSG00000025529.15	novel	4330	9	NA	NA	81	1	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_6	3.70809924354783	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAAAGTTTTATAATTTT	NA	False	NA	NA	False	NA	NA	NA	111510303	111544760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_111510603_111512361_111512480_111513964_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111537800_111537846_111541522_111541667_111542075
tx.25319	chrX	+	3564	18	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	25	419	combination_of_known_junctions	FALSE	canonical	1	3	junction_17	31.9870215895918	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACATCGTCATCACTT	NA	False	NA	NA	False	NA	NA	NA	128650515	128943698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128942396
tx.2532	chr11	+	7610	8	NIC	ENSMUSG00000020300.15	novel	6303	9	NA	NA	-1317	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	6.8332918532008	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTTTTACTATACTTA	NA	False	NA	NA	False	NA	NA	NA	31820893	31885633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_31823413_31839857_31839940_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
tx.25320	chrX	-	5521	6	FSM	ENSMUSG00000051323.17	ENSMUST00000149154.8	10289	6	1243	3525	-480	-3505	multi-exon	FALSE	canonical	3	7	junction_2	6.79411510058521	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTTTCCTCTGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	132588493	132487133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_132489327_132526017_132526191_132533643_132533703_132581829_132582158_132582840_132582982_132585866
tx.25321	chrX	-	5411	6	FSM	ENSMUSG00000085556.2	ENSMUST00000147142.2	636	6	2	-4777	2	4777	multi-exon	FALSE	canonical	3	6	junction_2	8.86791971095815	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCCGTTTCTTTGAAC	1136	False	NA	NA	False	NA	NA	NA	134053343	134018849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_134023744_134044969_134045069_134048327_134048426_134050176_134050266_134051692_134051783_134053202
tx.25322	chrX	-	5479	2	ISM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	4117	-164	4117	164	intron_retention	FALSE	canonical	3	243	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTCTTCGTGAATTTC	NA	False	NA	NA	False	NA	NA	NA	134074264	134068208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_134070935_134071511
tx.25323	chrX	+	2903	7	NNC	ENSMUSG00000087428.2	novel	632	6	NA	NA	1	4739	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	14.7948940141148	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCTGTTTCTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	134230510	134254615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_134230653_134232087_134232178_134233599_134233689_134238796_134238896_134249759_134250060_134250503_134251086_134253014
tx.25324	chrX	+	4826	6	NIC	ENSMUSG00000087428.2	novel	632	6	NA	NA	3	4735	intron_retention	FALSE	canonical	3	10	junction_3	13.8043471413899	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATTATCTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	134230512	134254611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_134230653_134232087_134232178_134233599_134233689_134238796_134238896_134249759_134250060_134250503
tx.25325	chrX	+	3770	8	NIC	ENSMUSG00000086685.2	novel	636	6	NA	NA	2	4762	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	10.2399776785471	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCCGTTTCTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	134420341	134454827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_134420483_134421903_134421994_134423420_134423510_134425261_134425360_134428618_134428718_134449948_134450249_134450691_134451274_134452456
tx.25326	chrX	+	5234	6	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1446	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.7302231183124	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9792	False	NA	NA	False	NA	NA	NA	134696890	134704216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_134697096_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
tx.25327	chrX	-	3470	7	FSM	ENSMUSG00000044348.15	ENSMUST00000125747.8	1737	7	-6	-1727	-6	0	multi-exon	FALSE	canonical	0	0	junction_6	13.5359603361646	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGTGAGAGTTTAAATT	NA	False	NA	NA	False	NA	NA	NA	135938787	135901803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099_135933250_135938678
tx.25328	chrX	-	3154	6	NIC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	0	-268	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	11.7813411800185	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGTTGTACTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	135939049	135902071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135933099_135933250_135938914
tx.25329	chrX	+	4050	3	ISM	ENSMUSG00000042515.14	ENSMUST00000113041.9	4343	5	14201	2	14201	0	3prime_fragment	FALSE	canonical	2	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTGTATTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	138132115	138139082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_138132164_138134427_138134595_138135247
tx.2533	chr11	-	2187	3	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_2	7	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATTGCATACCATCATT	NA	False	NA	NA	False	NA	NA	NA	31937014	31930694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_31932543_31934463_31934750_31936961
tx.25330	chrX	-	1968	4	NNC	ENSMUSG00000086807.9	novel	712	4	NA	NA	5	1261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.18241233033047	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTACTGTTTATATATGAA	NA	False	NA	NA	False	NA	NA	NA	138258482	138246978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_138248640_138255752_138255851_138257038_138257123_138258357
tx.25331	chrX	-	4812	5	ISM	ENSMUSG00000031433.16	ENSMUST00000033810.8	2787	7	-4	20123	2	3222	5prime_fragment	FALSE	canonical	3	21	junction_4	5.67890834580027	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAGTGTTTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	138899304	138865107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138899248
tx.25332	chrX	-	7655	14	NNC	ENSMUSG00000041688.17	novel	6519	12	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1.64622573531021	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTGTGGAAAATGCTT	NA	False	NA	NA	False	NA	NA	NA	144288189	144229419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_144233095_144233426_144234300_144235390_144235624_144236347_144236471_144242994_144243186_144244731_144244882_144254413_144254560_144258715_144258809_144259190_144259336_144263000_144263455_144269760_144270698_144272819_144272969_144279984_144280048_144287766
tx.25333	chrX	-	4681	21	FSM	ENSMUSG00000031290.15	ENSMUST00000112819.9	4892	21	211	0	211	0	multi-exon	TRUE	canonical	0	0	junction_17	2.22710574513201	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCTAAGCCTGGAA	NA	False	NA	NA	False	NA	NA	NA	146336835	146253382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_146256073_146263252_146263331_146263463_146263602_146263779_146263893_146264610_146264669_146267749_146267801_146271229_146271275_146274830_146274948_146275034_146275084_146279762_146279829_146286379_146286488_146291654_146291714_146291814_146291913_146292105_146292218_146292700_146292789_146295048_146295183_146302033_146302171_146302255_146302362_146305508_146305636_146308269_146308415_146336673
tx.25334	chrX	+	2045	7	FSM	ENSMUSG00000072930.4	ENSMUST00000112796.2	2028	7	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_3	7.43303437365925	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGTTTGTGTGTGTG	1192	False	NA	NA	False	NA	NA	NA	146963702	147007706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_146963812_146980956_146981083_146981801_146981882_146985542_146986502_146999377_146999460_147000265_147000316_147007067
tx.25335	chrX	+	2042	7	FSM	ENSMUSG00000096834.8	ENSMUST00000101186.10	2026	7	-17	1	-17	-1	multi-exon	TRUE	canonical	0	0	junction_1	5.30461015427985	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	147446576	147486844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_147446686_147463739_147463866_147464585_147464666_147468313_147469273_147478430_147478513_147479317_147479368_147486208
tx.25336	chrX	-	4525	6	FSM	ENSMUSG00000025269.17	ENSMUST00000112721.10	1852	6	-27	-2646	26	0	multi-exon	FALSE	canonical	0	0	junction_4	32.5662401882686	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGATCAGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	149371119	149351857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369063_149370038_149370123_149370918
tx.25337	chrX	+	4513	25	FSM	ENSMUSG00000025261.19	ENSMUST00000130243.8	5010	25	-23	520	-3	-5	multi-exon	TRUE	canonical	3	76	junction_1	19.9095175453573	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGCCCATTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	150586319	150656024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
tx.25338	chrX	+	4696	5	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	-3075	-727	intron_retention	FALSE	canonical	3	812	junction_3	33.5438146310166	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	NA	False	NA	NA	NA	150838387	150844963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
tx.25339	chrX	+	5718	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	5	40	intron_retention	FALSE	canonical	3	164	junction_4	86.7100916848783	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATTTTAATTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	151016229	151056808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
tx.2534	chr11	-	4107	2	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTATTGCATACCATCAT	NA	False	NA	NA	False	NA	NA	NA	31937014	31930695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_31934750_31936961
tx.25340	chrX	-	4430	5	NNC	ENSMUSG00000087403.10	novel	398	4	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	31.8472918785884	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTGACTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	151110465	151077819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_151081871_151083746_151083868_151103205_151103281_151110156_151110236_151110361
tx.25341	chrX	+	4552	8	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	-94	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	64.3869044867647	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATAGCTTCTTGGAG	3934	False	NA	NA	False	NA	NA	NA	152020410	152179034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_152020508_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
tx.25342	chrX	-	1861	4	NNC	ENSMUSG00000063728.11	novel	1212	3	NA	NA	-1668	495	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	3.55902608401044	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGATCCTCAGATCTT	NA	False	NA	NA	False	NA	NA	NA	153720651	153706512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_153708120_153709022_153709112_153718972_153719075_153720588
tx.25343	chrX	-	1659	4	FSM	ENSMUSG00000079350.3	ENSMUST00000070141.7	1646	4	-8	-5	-8	5	multi-exon	FALSE	canonical	3	13	junction_3	17.6823829464998	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTAGTTTCTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	153778854	153768765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_153770173_153771107_153771197_153777179_153777280_153778791
tx.25344	chrX	+	4733	28	FSM	ENSMUSG00000031298.16	ENSMUST00000112400.8	4682	28	-55	4	-20	-4	multi-exon	FALSE	canonical	0	0	junction_5	3.36201650901043	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCTTTAAGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	159173665	159281062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_159173746_159213345_159213391_159221190_159221310_159239000_159239034_159241830_159241879_159244338_159244378_159246323_159246366_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
tx.25345	chrX	-	3341	19	FSM	ENSMUSG00000031292.15	ENSMUST00000087104.11	3269	19	37	-109	37	109	multi-exon	FALSE	canonical	0	0	junction_3	1.20185042515466	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTACTTATTTGGGGG	NA	False	NA	NA	False	NA	NA	NA	159777663	159567194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_159567579_159591470_159591688_159594592_159594713_159599887_159599988_159606970_159607095_159612538_159612645_159612916_159613019_159616863_159617831_159623290_159623443_159629932_159630014_159635136_159635327_159639350_159639442_159641795_159641856_159643929_159644051_159648912_159649050_159659518_159659565_159707447_159707483_159711420_159711652_159777586
tx.25346	chrX	-	6135	4	FSM	ENSMUSG00000031357.4	ENSMUST00000134629.2	720	4	-4354	-1061	-4354	209	multi-exon	FALSE	canonical	3	113	junction_1	18.3847763108502	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGTACGTATTTATA	NA	False	NA	NA	False	NA	NA	NA	161650822	161639843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055
tx.25347	chrX	-	1356	9	ISM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-77	4499	-5	26	5prime_fragment	FALSE	canonical	3	144	junction_2	285.800383790855	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTCTGAAGTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	162741662	162722937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
tx.25348	chrX	+	1990	6	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	-18	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.6719040271741	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	164953469	164973478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_164953547_164959840_164959999_164960055_164960076_164961787_164961827_164963348_164963806_164972239
tx.25349	chrX	-	5283	12	ISM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	1346	-2848	-33	2848	3prime_fragment	TRUE	canonical	3	23	junction_11	7.54928708800971	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTTTTGTCGGGTAT	NA	False	NA	NA	False	NA	NA	NA	167455548	167434264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258
tx.2535	chr11	+	2314	5	FSM	ENSMUSG00000020297.11	ENSMUST00000020537.9	2239	5	-75	0	-75	0	multi-exon	FALSE	canonical	1	5	junction_2	2.06155281280883	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGACTGTCTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	31950387	32009202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_31950597_31951730_31951881_31967650_31967735_32005012_32005124_32007442
tx.25350	chrX	-	5103	12	NNC	ENSMUSG00000031358.18	novel	2316	12	NA	NA	55	2845	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	11.0191418723649	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGCTCTTTTTGTCGGG	NA	False	NA	NA	False	NA	NA	NA	167456839	167434267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453305_167454138_167454240_167454790_167454887_167456723
tx.25351	chrY	-	412	2	Antisense	novelGene_ENSMUSG00000096768.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGGGTTGCAGTGACAA	8264	False	NA	NA	False	NA	NA	NA	90804466	90803976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chrY_-_90804075_90804152
tx.25352	chrX	-	2420	5	Intergenic	novelGene_419	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.92028643696715	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTCGCTGCGACGT	NA	False	NA	NA	False	NA	NA	NA	169089004	169082921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_169084026_169085637_169085786_169087069_169088030_169088227_169088335_169088903
tx.25353	chrX	-	1221	8	Intergenic	novelGene_421	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_6	21.4371411435425	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTGCCTTACACAGT	NA	False	NA	NA	False	NA	NA	NA	169094611	169090871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_169091046_169091285_169091434_169092160_169092263_169092526_169092592_169092967_169093033_169093216_169093264_169093449_169093545_169094086
tx.25354	chrX_GL456233v2_random	+	2319	7	Intergenic	novelGene_432	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_5	16.8794747153656	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCACTATAGTATGATT	NA	False	NA	NA	False	NA	NA	NA	251261	469168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_467193_467333_467938
tx.25355	chrY	-	640	2	Intergenic	novelGene_428	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATAAATGCCAA	9543	False	NA	NA	False	NA	NA	NA	90733424	90732660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrY_-_90733140_90733263
tx.25356	chr1	+	3677	3	ISM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	97	22937	87	-10211	5prime_fragment	FALSE	canonical	3	103	junction_2	17.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGGGTGGTTGTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	7159240	7220915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_7159441_7190417_7190840_7217860
tx.25359	chr1	-	4049	4	ISM	ENSMUSG00000005886.15	ENSMUST00000081713.11	8171	22	223397	20	-535	-20	3prime_fragment	FALSE	canonical	3	44	junction_3	9.2736184954957	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	6697	False	NA	NA	False	NA	NA	NA	13219266	13209348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154
tx.2536	chr11	+	809	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	17	-5	-14	5	multi-exon	FALSE	canonical	3	400	junction_3	16.768646337734	131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGCCATAGTACTCT	NA	False	NA	NA	False	NA	NA	NA	32155431	32158989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
tx.25360	chr1	+	198	2	Antisense	novelGene_ENSMUSG00000101171.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	174	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTAGGCAGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	13421530	13586468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr1_+_13421581_13586320
tx.25361	chr1	-	1779	3	FSM	ENSMUSG00000025930.7	ENSMUST00000190719.2	741	3	-638	-400	1	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATTGTAAAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	14826215	14823569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_14824550_14824729_14824767_14825453
tx.25362	chr1	-	2774	13	FSM	ENSMUSG00000025920.20	ENSMUST00000027052.13	2763	13	-5	-6	-4	0	multi-exon	TRUE	canonical	0	0	junction_2	35.7596140918774	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGTTCCTTCAGTCC	NA	False	NA	NA	False	NA	NA	NA	16589535	16299027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_16300091_16301226_16301316_16415927_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
tx.25363	chr1	-	2762	2	ISM	ENSMUSG00000042686.6	ENSMUST00000038382.5	4809	5	-8	95030	-8	-95030	5prime_fragment	FALSE	canonical	3	16	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGC	NA	False	NA	NA	False	NA	NA	NA	17168121	17160191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_17162282_17167449
tx.25364	chr1	-	5689	11	NNC	ENSMUSG00000041779.6	novel	6492	11	NA	NA	-129	-640	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	24.2396369609778	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCATCCTCAGACCGG	NA	False	NA	NA	False	NA	NA	NA	21114009	21067162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21113936
tx.25365	chr1	-	5254	20	NIC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	-21345	346	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	2.69605231049804	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTTCACGTTCTATG	NA	False	NA	NA	False	NA	NA	NA	22572955	22356128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22496120_22496184_22497711_22497838_22498715_22498873_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22572479
tx.25366	chr1	-	5528	21	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	13.6318560731839	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCGTGACTTGGCTGTA	NA	False	NA	NA	False	NA	NA	NA	24139408	24050686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
tx.25367	chr1	-	1442	4	NIC	ENSMUSG00000042182.17	novel	382	3	NA	NA	-5	671	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	17.4610678049451	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTGTTCATGTGTAAGC	NA	False	NA	NA	False	NA	NA	NA	33946877	33912167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_33912993_33917340_33917519_33922521_33922730_33946646
tx.2537	chr11	-	2939	18	FSM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	7	0	7	0	multi-exon	TRUE	canonical	0	0	junction_2	19.5534933028863	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	NA	False	NA	NA	NA	32172293	32159584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
tx.25373	chr1	-	3748	7	ISM	ENSMUSG00000026110.16	ENSMUST00000042161.15	7030	15	-24	20705	-8	2868	5prime_fragment	FALSE	canonical	3	161	junction_1	22.711353010236	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTACCTCTGTGTCCCC	NA	False	NA	NA	False	NA	NA	NA	37575340	37499125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119
tx.25374	chr1	+	4611	2	NNC	ENSMUSG00000037216.6	novel	812	2	NA	NA	-30	2739	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATATTTGCTTTGCTAT	NA	False	NA	NA	False	NA	NA	NA	37911424	37918048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_37911932_37913944
tx.25375	chr1	-	4451	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_23	56.5329754717544	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	38168870	38091868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
tx.25376	chr1	-	4189	11	NNC	ENSMUSG00000037138.19	novel	5857	22	NA	NA	-13004	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.80277563773199	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGCAGCACTGCGACT	NA	False	NA	NA	False	NA	NA	NA	38249528	38216405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_38218652_38220340_38220517_38220695_38220746_38224405_38224500_38226016_38226089_38230251_38230389_38232646_38232711_38242891_38243020_38243970_38244173_38246986_38247112_38248633
tx.25378	chr1	-	4100	7	FSM	ENSMUSG00000041945.13	ENSMUST00000131390.8	3311	7	4	-793	4	790	multi-exon	FALSE	canonical	0	0	junction_5	5.1234753829798	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGAATATGGCTATTT	NA	False	NA	NA	False	NA	NA	NA	40829843	40810407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829430_40829561_40829644
tx.25379	chr1	+	2063	2	FSM	ENSMUSG00000041907.10	ENSMUST00000188621.2	2046	2	-25	8	-25	-8	multi-exon	FALSE	canonical	1	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATGAATGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	42992006	42994307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_42992394_42992631
tx.2538	chr11	+	1066	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	-5	676	1	2	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	NA	False	NA	NA	NA	32176505	32182024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
tx.25380	chr1	-	468	2	Antisense	novelGene_ENSMUSG00000041763.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCTATTCTAGTTATAA	NA	False	NA	NA	False	NA	NA	NA	43973070	43971378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr1_-_43971575_43972798
tx.25381	chr1	-	1617	6	FSM	ENSMUSG00000026049.12	ENSMUST00000147571.8	1360	6	-60	-197	1	0	multi-exon	FALSE	canonical	3	149	junction_5	107.444125013888	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	NA	False	NA	NA	NA	44141582	44125772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059
tx.25382	chr1	-	2664	2	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAATTCTCAATCA	NA	False	NA	NA	False	NA	NA	NA	45038354	45028128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_45030776_45038337
tx.25383	chr1	+	13941	3	ISM	ENSMUSG00000026097.10_ENSMUSG00000026096.15	ENSMUST00000027266.4	1910	4	8	-8819	8	470	intron_retention	FALSE	canonical	3	184	junction_2	6.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAAAAACATAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	53336261	53358287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_53336348_53338130_53338312_53344613
tx.25384	chr1	+	1270	7	NIC	ENSMUSG00000026096.15	novel	1868	8	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	47.461387815079	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	NA	False	NA	NA	NA	53352810	53365320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_53353018_53354014_53354259_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
tx.25385	chr1	-	6704	13	ISM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	2	43044	2	8246	5prime_fragment	FALSE	canonical	3	24	junction_4	6.03404691912668	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	54596839	54555196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
tx.25386	chr1	-	6291	28	FSM	ENSMUSG00000052331.15	ENSMUST00000179030.8	6140	28	-158	7	-158	-5	multi-exon	FALSE	canonical	1	2	junction_15	2.70395737013985	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAATGTGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	54965704	54684505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_54687495_54690827_54690920_54692901_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
tx.25387	chr1	+	1970	7	FSM	ENSMUSG00000025979.14	ENSMUST00000159311.8	1816	7	13	-167	13	167	multi-exon	FALSE	canonical	3	33	junction_1	175.833886255055	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55170402	55193264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_55170519_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
tx.25388	chr1	-	4304	5	ISM	ENSMUSG00000038331.16	ENSMUST00000177424.2	4694	7	98085	-4	98053	2	3prime_fragment	FALSE	canonical	1	1	junction_2	3.24037034920393	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTGTTTGTCAAATAG	NA	False	NA	NA	False	NA	NA	NA	56910946	56833142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_56836404_56870597_56870796_56884734_56884891_56889329_56889543_56910470
tx.25389	chr1	-	4493	6	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	0	-5	intron_retention	FALSE	canonical	3	34	junction_5	15.6511980372111	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	58009211	57994416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58004700_58006655_58006883_58009179
tx.2539	chr11	+	2092	3	NIC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	3	2	intron_retention	FALSE	canonical	3	350	junction_1	6	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	NA	False	NA	NA	NA	32176513	32182024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_32177950_32179848_32180054_32181573
tx.25390	chr1	-	4102	3	ISM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	64641	5	-1577	-5	3prime_fragment	FALSE	canonical	3	51	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTGTGTCTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	58947948	58939612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_58943342_58945864_58945971_58947681
tx.25391	chr1	+	1216	7	FSM	ENSMUSG00000026027.14	ENSMUST00000114296.8	1348	7	133	-1	133	1	multi-exon	FALSE	canonical	3	67	junction_2	9.28110386155057	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTTATGTCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	59012813	59030672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171
tx.25392	chr1	+	4081	12	ISM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	102	10335	102	-10335	5prime_fragment	FALSE	canonical	0	0	junction_11	3.62041959122543	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTAGTGACTCTTTACC	NA	False	NA	NA	False	NA	NA	NA	59802660	59907838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_59803888_59852746_59852918_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494
tx.25393	chr1	+	290	2	NNC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	-16	-4240	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTTTTTGAGGAAATAT	NA	False	NA	NA	False	NA	NA	NA	60219741	60220817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_60219836_60220621
tx.25394	chr1	+	5023	5	ISM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	37640	2	8317	-2	3prime_fragment	FALSE	canonical	3	110	junction_3	17.4553000547112	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAGTGTCTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	60486417	60520315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
tx.25395	chr1	+	6927	16	FSM	ENSMUSG00000025969.16	ENSMUST00000114155.8	6534	16	-396	3	21	-3	multi-exon	FALSE	canonical	2	3	junction_2	5.28898225874632	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATCTGGGTTTTTTTCC	4029	False	NA	NA	False	NA	NA	NA	62742464	62838470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62834867
tx.25396	chr1	+	2045	4	NNC	ENSMUSG00000084799.8	novel	1576	4	NA	NA	24268	279	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3.39934634239519	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACTATGCACTTTATC	413	False	NA	NA	False	NA	NA	NA	63178166	63197728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_63178431_63183277_63183345_63195378_63195481_63196116
tx.25397	chr1	+	2405	3	NNC	ENSMUSG00000084799.8	novel	1576	4	NA	NA	24269	4	intron_retention	FALSE	canonical	1	3	junction_1	3	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCTTTATATGCTTTT	414	False	NA	NA	False	NA	NA	NA	63178167	63197453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_63178431_63183277_63183345_63195378
tx.25398	chr1	+	4972	22	FSM	ENSMUSG00000025964.16	ENSMUST00000114101.8	3496	22	-37	-1439	-18	1439	multi-exon	TRUE	canonical	2	25	junction_12	9.21868358195068	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTGGAGTTTCAGTTCC	NA	False	NA	NA	False	NA	NA	NA	63485031	63609692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007
tx.25399	chr1	-	4267	5	NNC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-69	-3400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.70087712549569	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAATGCAAAA	NA	False	NA	NA	False	NA	NA	NA	64161510	64072005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058_64160299_64161153
tx.254	chr1	+	2594	23	NNC	ENSMUSG00000062939.12	novel	2982	24	NA	NA	4	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	8.55089285367565	32	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTCTGGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	52047788	52146346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_52047888_52050941_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
tx.2540	chr11	-	2818	13	NNC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-5	-3	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_2	46.4665351504595	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTGTTTGCTGAGGCT	4640	False	NA	NA	False	NA	NA	NA	32217634	32181965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_32183117_32183903_32184097_32184702_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
tx.25400	chr1	+	6673	8	FSM	ENSMUSG00000025958.15	ENSMUST00000185594.7	1569	8	169	-5273	-5	-1580	multi-exon	FALSE	canonical	1	3	junction_1	31.6169678030836	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAAAGTCTCTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	64571972	64642127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_64572064_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
tx.25401	chr1	-	8431	7	ISM	ENSMUSG00000051344.14	ENSMUST00000097713.2	8562	8	18284	2	-10443	-2	3prime_fragment	FALSE	canonical	3	14	junction_5	5.52016505389306	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTCTCATATCAGCT	NA	False	NA	NA	False	NA	NA	NA	64977699	64828281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855
tx.25402	chr1	+	5475	14	NIC	ENSMUSG00000015222.19	novel	4981	15	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	6.5098923358879	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAAGTTTCAGATTTT	NA	False	NA	NA	False	NA	NA	NA	66214464	66481740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_66214655_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459296_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
tx.25403	chr1	+	3031	3	ISM	ENSMUSG00000055567.19	ENSMUST00000152844.2	1912	6	13933	-1325	13933	-1160	3prime_fragment	FALSE	canonical	0	0	junction_2	2	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGTGATGCTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	66732790	66737147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_66732963_66733523_66733724_66734488
tx.25404	chr1	-	1123	7	NIC	ENSMUSG00000026004.16	novel	2342	8	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	4.42216638714053	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGCAAATCCTTAATCG	6620	False	NA	NA	False	NA	NA	NA	66856725	66774698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_66774904_66777209_66777373_66801206_66801412_66812064_66812187_66812580_66812674_66817125_66817268_66856532
tx.25405	chr1	-	5084	2	FSM	ENSMUSG00000026004.16	ENSMUST00000189846.2	1600	2	-58	-3426	-42	3426	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCAGTCTCTTGGTGTTA	6582	False	NA	NA	False	NA	NA	NA	66856763	66836474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_66841328_66856532
tx.25406	chr1	+	2362	5	ISM	ENSMUSG00000053153.15	ENSMUST00000113940.4	3559	11	-11	65811	-7	-13329	5prime_fragment	FALSE	canonical	2	3	junction_3	2.34520787991171	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTTGGAGTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	69866139	69899590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_69866281_69882127_69882175_69883437_69883534_69892481_69892601_69897631
tx.25407	chr1	+	2742	16	ISM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	2152	0	129	0	3prime_fragment	FALSE	canonical	3	73	junction_5	11.4348395509319	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	72624925	72672293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
tx.25408	chr1	-	8444	16	ISM	ENSMUSG00000055322.17	ENSMUST00000187584.7	9916	33	110326	3	6038	-3	3prime_fragment	FALSE	canonical	3	52	junction_15	11.9992592363955	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGTGGCCTGGCTTC	8341	False	NA	NA	False	NA	NA	NA	74020184	73949393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072
tx.25409	chr1	+	2340	3	ISM	ENSMUSG00000026176.14	ENSMUST00000141175.2	2957	6	2587	24	2220	-24	3prime_fragment	FALSE	canonical	3	20	junction_1	3.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAATAAAAAATACACA	1182	False	NA	NA	False	NA	NA	NA	74433540	74436417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_74433892_74433995_74434182_74434614
tx.2541	chr11	-	2101	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	59	705	10	267	multi-exon	FALSE	canonical	3	148	junction_6	11.6770786871831	244	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTGTGTATGTGTGC	4626	False	NA	NA	False	NA	NA	NA	32217648	32182667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
tx.25410	chr1	-	7623	24	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	16	-1	intron_retention	FALSE	canonical	3	147	junction_22	24.9415952938741	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTAGTTTGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	74544928	74474670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
tx.25411	chr1	+	1287	9	FSM	ENSMUSG00000026197.13	ENSMUST00000027394.12	1316	9	28	1	17	-1	multi-exon	FALSE	canonical	3	127	junction_8	17.9304210770411	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTATGAGTGCTGTTTCT	2069	False	NA	NA	False	NA	NA	NA	75145326	75148268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
tx.25412	chr1	-	4734	5	NNC	ENSMUSG00000045658.17	novel	2664	3	NA	NA	3857	2064	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.2613602842582	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAGCTTTTTACTGAA	NA	False	NA	-86	True	NA	NA	NA	84310037	84011952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_84016229_84136952_84137100_84287533_84287600_84289369_84289407_84309829
tx.25413	chr1	-	673	3	FSM	ENSMUSG00000045658.17	ENSMUST00000176720.2	450	3	-241	18	-19	-18	multi-exon	FALSE	canonical	3	16	junction_1	16	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTGGAACAGCCTCAT	421	False	NA	NA	False	NA	NA	NA	84262385	84058317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_84058520_84136952_84137100_84262061
tx.25414	chr1	+	4402	19	FSM	ENSMUSG00000062590.14	ENSMUST00000155168.8	2435	19	-13	-1954	-9	1954	multi-exon	FALSE	canonical	3	78	junction_14	12.3513382090993	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCCAAGCCAAGCCAAG	NA	False	NA	NA	False	NA	NA	NA	86082492	86143343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771
tx.25415	chr1	+	7647	28	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-8	1	-8	-1	intron_retention	FALSE	canonical	3	256	junction_21	38.5730027766815	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4062	False	NA	NA	False	NA	NA	NA	87781000	87872211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898
tx.25416	chr1	-	4156	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-24	-640	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.33431590427	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8621	False	NA	NA	False	NA	NA	NA	88205325	88190832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_88194001_88194052_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
tx.25417	chr1	+	4013	7	FSM	ENSMUSG00000026307.13	ENSMUST00000153621.8	2301	7	-36	-1676	-4	1676	multi-exon	FALSE	canonical	3	66	junction_4	6.51707159867238	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATCAAGAGAGACTGCC	NA	False	NA	NA	False	NA	NA	NA	91226055	91240728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518
tx.25418	chr1	-	6394	16	ISM	ENSMUSG00000026313.17	ENSMUST00000189303.7	3287	23	24734	-4178	-6620	-1	3prime_fragment	FALSE	canonical	3	55	junction_11	16.6581311476808	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	91909843	91856501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750
tx.25419	chr1	-	4706	2	ISM	ENSMUSG00000026313.17	ENSMUST00000191327.2	589	3	1109	-4422	1109	-2	3prime_fragment	FALSE	canonical	3	128	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGCTACCTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	91861477	91856502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_91861109_91861377
tx.2542	chr11	-	4971	10	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-6	267	intron_retention	FALSE	canonical	3	148	junction_3	13.3813948598441	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTGTGTATGTGTGC	4639	False	NA	NA	False	NA	NA	NA	32217635	32182667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_32183117_32183903_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
tx.25420	chr1	-	6277	3	ISM	ENSMUSG00000040693.8	ENSMUST00000071985.6	4908	13	45174	0	45174	0	3prime_fragment	FALSE	canonical	3	12	junction_2	3.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTTTATTACTCTTTA	NA	False	NA	NA	False	NA	NA	NA	96754722	96743994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_96746833_96748907_96749046_96751421
tx.25421	chr1	+	3728	3	NNC	ENSMUSG00000097814.6	novel	410	3	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.5	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCATCTCTATTATTTC	NA	False	NA	NA	False	NA	NA	NA	96799968	96808960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_96800116_96800214_96800394_96805558
tx.25422	chr1	+	5358	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	4	-65	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	28.1766475895866	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	105591611	105682846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658937_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
tx.25423	chr1	-	464	3	FSM	ENSMUSG00000099843.2	ENSMUST00000185535.2	471	3	22	-15	-8	15	multi-exon	FALSE	canonical	2	5	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTTGCATTCCTGGGAT	NA	False	NA	NA	False	NA	NA	NA	105917990	105907064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_105907355_105916748_105916834_105917901
tx.25424	chr1	+	7209	9	ISM	ENSMUSG00000064302.14	ENSMUST00000204325.2	4301	15	27971	-3433	5816	212	3prime_fragment	FALSE	canonical	3	204	junction_5	18.1297407593159	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGGTTT	5589	False	NA	NA	False	NA	NA	NA	118487779	118540620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
tx.25425	chr1	-	10810	27	NIC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	80	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_23	15.4919811286336	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTCGTTTCAAGGT	NA	False	NA	NA	False	NA	NA	NA	119765263	119580199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700877_119700958_119701002_119711211_119711320_119730052_119730208_119764631
tx.25426	chr1	-	9553	19	ISM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	94171	8	-2006	-8	3prime_fragment	FALSE	canonical	3	37	junction_14	10.892431396543	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTAATGACTTCGTTTC	NA	False	NA	NA	False	NA	NA	NA	119671172	119580204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081
tx.25427	chr1	-	3430	5	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	2.8613807855649	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCAGGGTCTCA	NA	False	NA	NA	False	NA	NA	NA	120228558	120220218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_120223201_120223780_120223908_120224004_120224116_120228248_120228305_120228404
tx.25428	chr1	-	1626	7	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	3.76017139089283	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCATTTCAGGGTCTC	NA	False	NA	NA	False	NA	NA	NA	120228558	120220219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_120221086_120221255_120221360_120222992_120223201_120223780_120223908_120224004_120224116_120228248_120228305_120228404
tx.25429	chr1	-	646	4	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	3.29983164553722	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGTTTGGTGTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	120228558	120223582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_120223908_120224004_120224116_120228248_120228305_120228404
tx.2543	chr11	+	6889	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	-13	537	-13	-537	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGTGTCCGGATTATGC	258	False	NA	NA	False	NA	NA	NA	32297806	32377636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
tx.25430	chr1	+	7242	24	FSM	ENSMUSG00000026339.19	ENSMUST00000112621.2	2338	24	-32	-4872	3	0	multi-exon	FALSE	canonical	2	9	junction_9	17.1308761805856	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTCATTTAAGAATA	NA	False	NA	NA	False	NA	NA	NA	121358806	121434189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389964_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
tx.25431	chr1	-	4120	3	FSM	ENSMUSG00000086825.2	ENSMUST00000130486.2	3681	3	-423	-16	-423	16	multi-exon	FALSE	canonical	3	4	junction_2	0.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTATTTGTCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	130365351	130357501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_130359963_130363408_130363558_130363841
tx.25433	chr1	+	4639	2	FSM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	-1220	2709	-1220	-2709	multi-exon	FALSE	canonical	1	2	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTGGTATCTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	130643843	130649386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_130645549_130646452
tx.25434	chr1	+	1208	6	FSM	ENSMUSG00000026433.14	ENSMUST00000027693.8	1226	6	15	3	15	-3	multi-exon	FALSE	canonical	3	23	junction_1	27.6506781110337	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGGGTTGTGATGCT	NA	False	NA	NA	False	NA	NA	NA	131794992	131800622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131795149_131795256_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
tx.25435	chr1	+	722	3	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_2	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATCTTTGGTCCATAAG	NA	False	NA	NA	False	NA	NA	NA	131807798	131812595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_+_131807860_131811662_131811895_131812166
tx.25436	chr1	+	2651	3	ISM	ENSMUSG00000026435.16	ENSMUST00000027695.8	3340	5	6879	0	769	0	3prime_fragment	FALSE	canonical	3	24	junction_2	2.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATATGTGTTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	131905225	131910702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_131905937_131906485_131906752_131909028
tx.25437	chr1	-	190	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGGAGGTTGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	132335391	132335201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_132335200_132335400
tx.25438	chr1	+	4351	5	ISM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	9664	195	-1806	0	3prime_fragment	FALSE	canonical	3	25	junction_4	7.15454401062709	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCTTGTTCACTTTGG	NA	False	NA	NA	False	NA	NA	NA	132253527	132261031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
tx.25439	chr1	-	3353	2	ISM	ENSMUSG00000042066.17	ENSMUST00000136828.3	2771	4	6320	-1	4196	0	intron_retention	FALSE	canonical	3	30	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGAGGTCTGCTGA	3296	False	NA	NA	False	NA	NA	NA	132288490	132284052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_132285556_132286640
tx.2544	chr11	+	3278	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	-244	-2022	-244	2022	multi-exon	FALSE	canonical	3	148	junction_1	5	208	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTTGCCATTAT	4237	False	NA	NA	False	NA	NA	NA	32405125	32468709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_32405547_32449224_32449462_32466089
tx.25440	chr1	+	6957	24	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23332	-298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.92879464351643	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTATGCTCTCAGTGTC	162	False	NA	NA	False	NA	NA	NA	133132390	133230875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
tx.25441	chr1	-	8513	21	FSM	ENSMUSG00000026463.18	ENSMUST00000143567.8	11725	21	-7	3219	-7	-2	multi-exon	FALSE	canonical	2	6	junction_20	5.11346262331114	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATCGTCTGGGTCTGCA	9202	False	NA	NA	False	NA	NA	NA	133728786	133630413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826_133681488_133728374
tx.25443	chr1	+	2045	7	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	27	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	25.5631027502966	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTTATTTATTTCAG	NA	False	NA	NA	False	NA	NA	NA	136343035	136367892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136360049_136360302_136361450_136361604_136362243_136362373_136367490
tx.25444	chr1	+	4669	21	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	49	8254	intron_retention	FALSE	canonical	3	13	junction_1	12.9707362936728	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTGTTTTCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	136394129	136431908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
tx.25445	chr1	-	3455	2	FSM	ENSMUSG00000079283.3	ENSMUST00000195075.2	970	2	-2487	2	10	-2	multi-exon	FALSE	canonical	3	59	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGGTCCACAAGATGC	NA	False	NA	NA	False	NA	NA	NA	138784575	138779723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_138779912_138781308
tx.25446	chr1	+	7985	20	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	27	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	19.0687631620894	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATTGTGTGTGGTGA	NA	False	NA	NA	False	NA	NA	NA	138891492	139103776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
tx.25447	chr1	+	5740	2	ISM	ENSMUSG00000033964.13	ENSMUST00000200243.5	2127	9	-66	13189	-66	-13189	5prime_fragment	FALSE	canonical	3	39	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACATTGTTTAGGATCT	NA	False	NA	NA	False	NA	NA	NA	139349959	139356406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_139350065_139350771
tx.25448	chr1	-	3526	14	ISM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	-182	12887	-182	-9545	5prime_fragment	FALSE	canonical	3	71	junction_5	9.88693477726746	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTGTTTTTGATT	NA	False	NA	NA	False	NA	NA	NA	153061975	153011388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
tx.25449	chr1	-	189	2	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTGATGTGTCTAAAGA	9688	False	NA	NA	False	NA	NA	NA	153396843	153385268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_153385409_153396794
tx.2545	chr11	+	5052	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	-18	-8	-18	8	multi-exon	TRUE	canonical	3	12	junction_8	17.3190824607989	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTTGTTCTTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	32483286	32574595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
tx.25450	chr1	+	2996	7	NIC	ENSMUSG00000033701.14	novel	5592	8	NA	NA	10	483	intron_retention	FALSE	canonical	0	0	junction_4	129.622100310437	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATGGTTAATTTCATT	NA	False	NA	NA	False	NA	NA	NA	155433881	155564600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155500614_155500705_155552949_155552981_155562694
tx.25451	chr1	-	4438	4	ISM	ENSMUSG00000033671.19	ENSMUST00000132189.2	1089	5	532	-3567	532	-2	3prime_fragment	FALSE	canonical	3	21	junction_2	2.49443825784929	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCATGTCCGGTGTAAA	5543	False	NA	NA	False	NA	NA	NA	155736587	155720711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_155724474_155733768_155733892_155735914_155736062_155736181
tx.25452	chr1	+	2113	9	ISM	ENSMUSG00000026596.14	ENSMUST00000027888.13	3549	12	-282	7229	-19	5494	5prime_fragment	FALSE	canonical	2	3	junction_2	3.46410161513775	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTTGAAGGATGGCT	NA	False	NA	NA	False	NA	NA	NA	156386336	156463057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_156386776_156448408_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634
tx.25453	chr1	+	10400	13	NNC	ENSMUSG00000026596.14	novel	10151	13	NA	NA	3	54	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_2	3.20047739494525	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCTTGAGTTGGAGTAT	NA	False	NA	NA	False	NA	NA	NA	156386358	156477192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_156386776_156448408_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468565_156468800_156469111
tx.25454	chr1	+	1213	8	FSM	ENSMUSG00000033488.12	ENSMUST00000193791.6	778	8	-3	-432	-3	0	multi-exon	FALSE	canonical	1	1	junction_7	18.9725903258746	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	157286143	157316630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157316012
tx.25455	chr1	+	1568	2	ISM	ENSMUSG00000033488.12	ENSMUST00000194220.2	1202	4	105	2672	105	906	5prime_fragment	FALSE	canonical	3	43	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTGTGTGAAGATAAA	NA	False	NA	NA	False	NA	NA	NA	157299942	157317536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_157299987_157316012
tx.25456	chr1	-	3162	5	FSM	ENSMUSG00000043467.20	ENSMUST00000159250.9	2473	5	-137	-552	-136	552	multi-exon	FALSE	canonical	2	3	junction_4	2.06155281280883	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTGACTCCAAGAGCTA	NA	False	NA	NA	False	NA	NA	NA	160862555	160846276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_160847977_160857211_160857312_160859374_160860332_160861657_160861855_160862347
tx.25457	chr1	+	1766	6	FSM	ENSMUSG00000026708.17	ENSMUST00000192850.6	1914	6	160	-12	36	-2	multi-exon	FALSE	canonical	2	3	junction_3	49.9095181303126	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAGTTATTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	160898621	160913906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160907437_160907581_160910477_160911021_160913557
tx.25458	chr1	+	2308	2	ISM	ENSMUSG00000044835.16	ENSMUST00000052245.9	849	6	-51	11044	4	-10148	5prime_fragment	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATTCTTACTCAGTT	NA	False	NA	NA	False	NA	NA	NA	160970285	160980717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_160970411_160978534
tx.25459	chr1	+	3032	2	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGATCTTTCCTTATG	534	False	NA	NA	False	NA	NA	NA	161705402	161711595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_+_161705610_161708770
tx.2546	chr11	+	2461	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26167	8	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	21.9696760710454	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTTGTTCTTTCTGGT	1692	False	NA	NA	False	NA	NA	NA	32564761	32574595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_32564811_32565780_32565907_32567848_32567963_32572423
tx.25460	chr1	+	1446	2	FSM	ENSMUSG00000026698.9	ENSMUST00000160881.2	704	2	10	-752	7	-706	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGTCTAGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	161796877	161799193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_161796939_161797808
tx.25461	chr1	+	6693	4	ISM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	30	0	30	0	intron_retention	FALSE	canonical	2	28	junction_1	11.4406682011537	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCATCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	164103183	164115416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959
tx.25463	chr1	+	3646	3	NIC	ENSMUSG00000026563.14	novel	2215	8	NA	NA	8215	-5	intron_retention	FALSE	canonical	3	166	junction_1	11.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCCTTTTCCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	166215122	166221185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_166217557_166219391_166219555_166220136
tx.25464	chr1	-	6345	2	FSM	ENSMUSG00000026656.16	ENSMUST00000161503.2	802	2	-3427	-2116	-3427	-1	multi-exon	FALSE	canonical	3	55	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGGGTTATTTGATA	NA	False	NA	NA	False	NA	NA	NA	170792626	170786186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_170788670_170788764
tx.25465	chr1	+	1849	5	Antisense	novelGene_ENSMUSG00000038370.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	171017255	171032967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr1_+_171017453_171017892_171017989_171018303_171018664_171031445_171031606_171031931
tx.25466	chr1	+	2252	5	ISM	ENSMUSG00000006411.13	ENSMUST00000111286.9	3201	10	14494	0	14238	0	3prime_fragment	FALSE	canonical	1	1	junction_3	2.29128784747792	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGATTCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	171212160	171215855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_171212401_171212665_171212820_171213230_171213307_171213727_171213803_171214148
tx.25467	chr1	-	5103	6	ISM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	14380	1	-3886	-1	3prime_fragment	FALSE	canonical	3	70	junction_3	10.0119928086271	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTCTGTTGCT	9063	False	NA	NA	False	NA	NA	NA	171840482	171828527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394
tx.25468	chr1	-	3030	20	ISM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	6731	2785	6731	49	3prime_fragment	FALSE	canonical	3	93	junction_19	23.1694947024	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTCCCATCCCACTCT	NA	False	NA	NA	False	NA	NA	NA	172118900	172102060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759
tx.25469	chr1	+	7007	3	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	745	junction_2	38	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTGTGTCTTCTCTT	3726	False	NA	NA	False	NA	NA	NA	172139916	172147408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_172146535_172146859_172146991_172147150
tx.2547	chr11	+	2517	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26183	6	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	27.0102861065105	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTGTTGTTCTTTCTG	1708	False	NA	NA	False	NA	NA	NA	32564777	32574593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_32564885_32565780_32565907_32567848_32567963_32572423
tx.25470	chr1	+	2998	3	NIC	ENSMUSG00000026500.7	novel	471	4	NA	NA	11	2	intron_retention	FALSE	canonical	3	422	junction_2	50.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTACATGAAATCCTT	NA	False	NA	NA	False	NA	NA	NA	178146705	178150260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_178149425_178149506_178149571_178150045
tx.25471	chr1	-	2698	9	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	32.6726185054091	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTATATGTGTGT	7837	False	NA	NA	False	NA	NA	NA	179373873	179355619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179370489_179370698_179372462_179372552_179373386
tx.25472	chr1	+	6511	35	FSM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	-1172	-422	-534	0	multi-exon	FALSE	canonical	3	8	junction_12	17.6801894884082	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	179787502	179990153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
tx.25473	chr1	+	4088	7	NNC	ENSMUSG00000038855.11	novel	6235	8	NA	NA	48355	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.33749739908346	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGATGTGATCCTTC	9978	False	NA	NA	False	NA	NA	NA	180209785	180252367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_180210053_180240238_180240339_180241351_180241566_180245718_180245924_180247822_180247925_180248839_180248912_180249239
tx.25474	chr1	-	1938	3	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAGAAATAATTGAG	NA	False	NA	NA	False	NA	NA	NA	180713145	180704935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_180706628_180710076_180710166_180712988
tx.25475	chr1	+	3314	4	NIC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	39	25	intron_retention	FALSE	canonical	3	1855	junction_1	126.249312429371	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCTGAACTCCAGCAAA	NA	False	NA	NA	False	NA	NA	NA	180978534	180993971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_180981369_180983423_180983537_180989639_180989781_180993745
tx.25476	chr1	-	177	2	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTCGC	NA	False	NA	NA	False	NA	NA	NA	181684028	181636079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_181636238_181684009
tx.25479	chr1	+	3942	10	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	4	junction_1	68.4880813277071	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGATGGATGGTTGTTAC	NA	False	NA	NA	False	NA	NA	NA	183078592	183104463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_183080704_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
tx.2548	chr11	+	2413	3	ISM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	82475	-8	27185	8	3prime_fragment	FALSE	canonical	3	65	junction_2	7	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTTGTTCTTTCTGGT	2710	False	NA	NA	False	NA	NA	NA	32565779	32574595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_32565907_32567848_32567963_32572423
tx.25480	chr1	+	2307	10	NIC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	23.4020153189347	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	NA	False	NA	NA	NA	183170334	183191020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187725_183187850_183189427_183189583_183190053
tx.25481	chr1	-	2461	6	NNC	ENSMUSG00000039246.9	novel	1578	5	NA	NA	3	-136	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	61.9593415071529	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTACTTACTAAAATGT	NA	False	NA	NA	False	NA	NA	NA	185849504	185820063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_185820966_185821640_185821757_185832389_185832560_185833859_185834882_185846460_185846561_185849353
tx.25482	chr1	-	2291	2	NNC	ENSMUSG00000037624.16	novel	334	2	NA	NA	4529	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTCTTTCTGTGTCTCC	NA	False	NA	NA	False	NA	NA	NA	188942885	188940129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_188942305_188942769
tx.25483	chr1	+	190	2	Antisense	novelGene_ENSMUSG00000037624.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTAAAAACAAAATCAAC	NA	False	NA	NA	False	NA	NA	NA	188971832	188973906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr1_+_188971943_188973826
tx.25484	chr1	+	2928	9	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	245	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	6.18339510301582	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGACTGATCTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	189576863	189602510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_189576951_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
tx.25485	chr1	-	5563	12	ISM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	11	23190	10	0	5prime_fragment	FALSE	canonical	3	35	junction_4	5.58036700117193	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACGGCTTCCTTTCATA	NA	False	NA	NA	False	NA	NA	NA	190643956	190528265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
tx.25486	chr1	+	768	3	FSM	ENSMUSG00000026630.10	ENSMUST00000027943.6	801	3	35	-2	-23	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTTTGTCCATCTTC	NA	False	NA	NA	False	NA	NA	NA	190830556	190841142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_190830725_190832924_190833030_190840647
tx.25487	chr1	+	548	2	FSM	ENSMUSG00000073478.7	ENSMUST00000139056.3	716	2	20	148	0	-148	multi-exon	FALSE	canonical	3	14	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTTCAGTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	190956670	190957884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_190956740_190957405
tx.25488	chr1	-	3768	10	FSM	ENSMUSG00000037395.17	ENSMUST00000073279.13	3748	10	-9	-11	-9	-4	multi-exon	FALSE	canonical	1	2	junction_1	12.9109007441267	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAACGAAAAAGTATT	NA	False	NA	NA	False	NA	NA	NA	191822346	191782849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_191785456_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
tx.25489	chr1	-	7843	8	FSM	ENSMUSG00000016200.15	ENSMUST00000195354.6	7882	8	36	3	-22	-3	multi-exon	FALSE	canonical	3	7	junction_1	6	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACGTTTCTTCACA	164	False	NA	NA	False	NA	NA	NA	192718047	192573543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192669025_192669191_192709277_192709326_192717930
tx.2549	chr11	+	3893	12	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	12	-73	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	460	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTTCCTGGCGATTG	NA	False	NA	NA	False	NA	NA	NA	32592735	32696716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
tx.25490	chr1	+	3097	3	ISM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	14430	55	-962	-55	3prime_fragment	FALSE	canonical	3	28	junction_2	3	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTGGAGATTTATTGC	8162	False	NA	NA	False	NA	NA	NA	192849848	192854276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_192850140_192850824_192850944_192851589
tx.25491	chr1	+	5266	22	ISM	ENSMUSG00000026640.13	ENSMUST00000027952.12	11040	32	1	18727	1	11514	5prime_fragment	FALSE	canonical	1	2	junction_18	3.52252228741084	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCCATCTCACTGATC	NA	False	NA	NA	False	NA	NA	NA	194302133	194480450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_194302706_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847
tx.25492	chr10	-	3054	3	NNC	ENSMUSG00000075327.11	novel	3086	3	NA	NA	-302	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGGCATGTGATCGTT	NA	False	NA	NA	False	NA	NA	NA	4337777	4317082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_4319852_4324569_4324755_4337677
tx.25493	chr10	-	545	2	NNC	ENSMUSG00000040006.14	novel	353	2	NA	NA	-8	45	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCCATGTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	7668596	7667138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_7667359_7668271
tx.25494	chr10	-	7183	28	NNC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-161	-2205	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	7.63484180110147	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTTCTGCACTTTCTT	5845	False	NA	NA	False	NA	NA	NA	9776984	9633495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9654657_9654712_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
tx.25495	chr10	-	6578	2	ISM	ENSMUSG00000019790.18	ENSMUST00000136259.8	3791	7	14208	-2828	2828	2205	3prime_fragment	FALSE	canonical	3	29	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTCTGCACTTTCT	7861	False	NA	NA	False	NA	NA	NA	9641864	9633496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_9636699_9638488
tx.25496	chr10	-	2112	3	FSM	ENSMUSG00000019832.6	ENSMUST00000019974.5	2149	3	27	10	27	-10	multi-exon	FALSE	canonical	1	1	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTAGATTTGTCA	NA	False	NA	NA	False	NA	NA	NA	10433982	10420755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_10422196_10426422_10426701_10433588
tx.25497	chr10	+	3984	2	ISM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	8660	-81	3624	81	intron_retention	FALSE	canonical	3	173	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTTATAATATTT	NA	False	NA	NA	False	NA	NA	NA	13385404	13391368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_13388471_13390450
tx.25498	chr10	+	6434	2	NIC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	6321	-2	intron_retention	FALSE	canonical	3	69	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACTAGCCCTTGACCT	NA	False	NA	NA	False	NA	NA	NA	13388101	13394777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_13390619_13390860
tx.255	chr1	+	4159	25	NIC	ENSMUSG00000026104.15	novel	5151	25	NA	NA	16	-81	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8.09663853432741	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTATGAGTTGGTTTAAT	3279	False	NA	NA	False	NA	NA	NA	52158629	52200085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_52158783_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
tx.2550	chr11	+	3955	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	13	-147	13	-73	multi-exon	FALSE	canonical	3	196	junction_1	93.3590738314529	373	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTTCCTGGCGATTG	NA	False	NA	NA	False	NA	NA	NA	32592736	32696716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
tx.25500	chr10	+	7141	6	ISM	ENSMUSG00000015501.11	ENSMUST00000191138.7	9846	10	163072	-1	162427	1	3prime_fragment	FALSE	canonical	2	4	junction_2	0.748331477354788	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTCTAGTTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	14005194	14027119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_14008543_14009483_14009639_14015128_14015305_14017984_14018087_14018802_14019699_14024655
tx.25501	chr10	-	3377	4	ISM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	124341	-1975	124300	-4	3prime_fragment	FALSE	canonical	3	97	junction_3	2.49443825784929	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTATTCAGTTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	14296439	14278330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169
tx.25502	chr10	+	514	2	NIC	ENSMUSG00000112227.2	novel	628	3	NA	NA	-118	-55	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTGACTTTTAATAAAA	NA	False	NA	NA	False	NA	NA	NA	15667406	15682758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_15667781_15682618
tx.25503	chr10	-	4018	3	NIC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	32	0	intron_retention	FALSE	canonical	1	2	junction_2	44	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAACTTTGCATTTTAG	NA	False	NA	NA	False	NA	NA	NA	17823783	17774789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_17778126_17783781_17783937_17823256
tx.25504	chr10	-	854	3	FSM	ENSMUSG00000078453.4	ENSMUST00000218994.2	425	3	-165	-264	47	0	multi-exon	FALSE	canonical	1	1	junction_2	71	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTGGCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	17898791	17887007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_17887565_17894586_17894654_17898561
tx.25505	chr10	+	3134	2	ISM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	83	117807	5	8623	5prime_fragment	FALSE	canonical	3	27	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAGAAATGTATTCAT	NA	False	NA	NA	False	NA	NA	NA	20828528	20838521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_20828652_20835510
tx.25506	chr10	+	9110	4	NIC	ENSMUSG00000019977.17	novel	2625	5	NA	NA	-4	3472	intron_retention	FALSE	canonical	3	88	junction_3	505.406986716866	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	21171924	21190580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_21175143_21180428_21180543_21183483_21183679_21184997
tx.25507	chr10	-	2014	2	NNC	ENSMUSG00000097327.8	novel	1630	2	NA	NA	0	6872	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCACTCTACTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	22024718	21982076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_21983760_22024387
tx.25508	chr10	+	3044	12	FSM	ENSMUSG00000020000.8	ENSMUST00000095784.3	3090	12	38	8	10	-8	multi-exon	FALSE	canonical	0	0	junction_8	1.22643068756655	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTCTTGATTCAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	24099452	24178680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_24099766_24120137_24120285_24128360_24128529_24128829_24128914_24155263_24155444_24155740_24155844_24157315_24157483_24158460_24158653_24160653_24160714_24162904_24163048_24176053_24176223_24177362
tx.25509	chr10	-	4319	25	FSM	ENSMUSG00000037370.14	ENSMUST00000105520.8	6777	25	161	2297	0	1224	multi-exon	FALSE	canonical	0	0	junction_2	1.10554159678513	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTCTATCTTAGCATTC	7908	False	NA	NA	False	NA	NA	NA	24587895	24516108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_24517875_24521175_24521339_24523050_24523184_24523914_24523996_24525141_24525272_24527142_24527295_24528732_24528785_24529800_24529968_24530785_24530874_24531700_24531771_24533002_24533131_24533736_24533769_24536047_24536180_24537764_24537874_24540452_24540526_24540808_24540875_24544906_24545017_24545577_24545698_24545840_24545921_24547912_24548011_24550512_24550574_24551875_24552002_24553810_24553928_24555085_24555159_24587703
tx.2551	chr11	-	211	2	Antisense	novelGene_ENSMUSG00000020271.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCAGATGCACAGGAGA	NA	False	NA	NA	False	NA	NA	NA	32625372	32613144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_32613221_32625237
tx.25511	chr10	+	11630	13	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	608	-606	intron_retention	FALSE	canonical	3	144	junction_2	29.4169027374852	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCAATTGTCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	28436754	28472787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
tx.25512	chr10	+	4297	7	FSM	ENSMUSG00000038916.8	ENSMUST00000092629.4	4105	7	-156	-36	-156	36	multi-exon	FALSE	canonical	0	0	junction_1	2.91070819942883	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGGTCTGTCTCCAGA	NA	False	NA	NA	False	NA	NA	NA	29019678	29075662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_29020432_29022559_29023750_29024180_29024406_29026239_29026399_29056957_29057030_29072260_29073437_29074940
tx.25513	chr10	-	2585	5	FSM	ENSMUSG00000019789.10	ENSMUST00000019924.9	2550	5	-30	-5	-30	5	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGAGGAGTTGCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	30718827	30708349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_30710424_30713470_30713553_30716386_30716471_30716599_30716679_30718561
tx.25514	chr10	-	712	5	FSM	ENSMUSG00000051736.9	ENSMUST00000124941.8	721	5	10	-1	10	0	multi-exon	FALSE	canonical	2	3	junction_3	11.3880419739304	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTGATGACAATGGTTG	NA	False	NA	NA	False	NA	NA	NA	39009886	38994813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_38995031_38996253_38996393_38998172_38998329_39008242_39008375_39009818
tx.25515	chr10	+	3397	13	NIC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	33.424874303761	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	NA	NA	NA	39245768	39441377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
tx.25516	chr10	-	1875	2	Antisense	novelGene_ENSMUSG00000019843.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACATTTACTCATGTA	NA	False	NA	-72	True	NA	NA	NA	39379307	39377092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_-_39378860_39379199
tx.25517	chr10	+	4288	11	ISM	ENSMUSG00000019841.16	ENSMUST00000164763.8	10399	33	112331	-4	-14230	-1	3prime_fragment	FALSE	canonical	3	51	junction_10	14.5821809068465	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTATGACTTTTATCTTA	NA	False	NA	NA	False	NA	NA	NA	39720690	39751206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
tx.25518	chr10	-	6916	4	ISM	ENSMUSG00000096687.9	ENSMUST00000178045.9	3990	5	-10	1	-10	-1	intron_retention	FALSE	canonical	2	4	junction_3	5.43650214343336	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGACTGCTTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	39775221	39766009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_39768926_39770011_39770129_39770767_39770937_39771507
tx.25519	chr10	-	7388	3	ISM	ENSMUSG00000096687.9	ENSMUST00000178045.9	3990	5	87	3	41	-3	intron_retention	FALSE	canonical	2	13	junction_1	2	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTTGACTGCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	39775124	39766011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_39768926_39770011_39770129_39770767
tx.2552	chr11	-	1281	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	129	223	0	0	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	9672	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	NA	False	NA	NA	NA	33113077	33102509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
tx.25520	chr10	-	4795	4	NIC	ENSMUSG00000019838.12	novel	5397	6	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.5764535535124	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATCTTGTGATTGTGTT	7143	False	NA	NA	False	NA	NA	NA	40018250	39909530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_39913401_39916594_39916824_39932482_39932627_40017698
tx.25521	chr10	+	2714	9	NNC	ENSMUSG00000019831.15	novel	2719	9	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	canonical	3	34	junction_5	78.456098392668	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGTGTCGCTCTTCGA	NA	False	NA	NA	False	NA	NA	NA	40759822	40814564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809111_40809282_40810472_40810653_40812105_40812735_40813641
tx.25522	chr10	+	5691	2	ISM	ENSMUSG00000019826.12	ENSMUST00000215881.2	719	3	1844	-1153	1844	7	3prime_fragment	FALSE	canonical	3	58	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGATCTTTATCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	41333970	41341577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_41338357_41340272
tx.25523	chr10	-	4626	18	ISM	ENSMUSG00000075225.16	ENSMUST00000189488.3	7260	48	103481	10083	-316	-4	internal_fragment	FALSE	canonical	0	0	junction_4	2.62408329684652	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGACACATGTCCCTT	1225	False	NA	NA	False	NA	NA	NA	41489149	41424927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_41426928_41428313_41428467_41429068_41429204_41429411_41429565_41431968_41432137_41432760_41432815_41437106_41437257_41445838_41445949_41455110_41455232_41456220_41456360_41457154_41457388_41462247_41462401_41463345_41463442_41465555_41465707_41474412_41474552_41481046_41481213_41482567_41482689_41488765
tx.25524	chr10	+	474	2	NNC	ENSMUSG00000045886.8	novel	456	2	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCGGTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	43400081	43400640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_43400167_43400251
tx.25525	chr10	-	5166	2	FSM	ENSMUSG00000019863.8	ENSMUST00000146937.2	918	2	-4016	-232	-4016	-2	multi-exon	FALSE	canonical	3	73	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGGATTTTACTATA	NA	False	NA	NA	False	NA	NA	NA	43757116	43750185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_43750703_43752467
tx.25526	chr10	-	5236	7	FSM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	-228	-2491	-228	1	multi-exon	FALSE	canonical	0	0	junction_6	17.9814719456816	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATGCTTGTCTAGTGT	NA	False	NA	NA	False	NA	NA	NA	44333434	44313171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44333119
tx.25527	chr10	-	5851	3	ISM	ENSMUSG00000058298.11	ENSMUST00000219838.3	4132	8	14513	-3016	-2974	2236	3prime_fragment	FALSE	canonical	3	35	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCTCTGTAGTAGTAC	NA	False	NA	NA	False	NA	NA	NA	53492022	53481917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_53487568_53488922_53489049_53491947
tx.25528	chr10	+	4566	2	FSM	ENSMUSG00000019878.9	ENSMUST00000220162.2	2304	2	-1992	-270	-1992	0	multi-exon	FALSE	canonical	3	192	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCCTTCTCATTGTT	NA	False	NA	NA	False	NA	NA	NA	57384291	57389231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_57387625_57387998
tx.2553	chr11	-	1574	3	FSM	ENSMUSG00000040610.8	ENSMUST00000037746.8	1533	3	-37	-4	-37	4	multi-exon	FALSE	canonical	3	12	junction_1	1	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCTTTTATTTCGTTTT	9453	False	NA	NA	False	NA	NA	NA	33153626	33150747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_33151490_33152428_33152673_33153038
tx.25531	chr10	+	3056	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	-43	-775	8	0	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGGTGGGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	59715404	59735118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
tx.25532	chr10	+	4081	11	NNC	ENSMUSG00000044475.15	novel	1473	11	NA	NA	-102	2047	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	72.0639299511205	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGGGAGATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	59839046	59937857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_59839698_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
tx.25534	chr10	-	5406	3	ISM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	28194	1	-272	-1	3prime_fragment	FALSE	canonical	3	34	junction_2	6.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTTGGTGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	60560367	60547851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_60552270_60556639_60556803_60559542
tx.25535	chr10	-	4215	8	ISM	ENSMUSG00000059901.13	ENSMUST00000092486.11	5188	22	60399	0	60203	0	3prime_fragment	FALSE	canonical	2	13	junction_3	4.6246897303539	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCCCTTGGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	61048818	61032890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366
tx.25536	chr10	+	3467	4	ISM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	-4	31667	-4	-31667	5prime_fragment	FALSE	canonical	3	23	junction_1	4.92160768674447	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	1770	False	NA	NA	False	NA	NA	NA	61311575	61386903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826
tx.25537	chr10	+	1075	2	Antisense	novelGene_ENSMUSG00000020086.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	61619016	61620559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_+_61619413_61619880
tx.25538	chr10	+	1540	2	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGCTGCATTCACAAGC	NA	False	NA	NA	False	NA	NA	NA	61751926	61759357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_+_61752029_61757919
tx.25539	chr10	+	872	2	FSM	ENSMUSG00000085347.2	ENSMUST00000143122.2	1218	2	-314	660	37	16	multi-exon	FALSE	canonical	3	18	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTGGCTATTTGAGG	NA	False	NA	NA	False	NA	NA	NA	62176071	62185646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_62176563_62185265
tx.2554	chr11	-	4598	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-15	-478	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAAGTGTCTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	33463761	33162272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
tx.25540	chr10	-	202	2	Antisense	novelGene_ENSMUSG00000097129.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAAGCCTTGGCTTCTGC	7671	False	NA	NA	False	NA	NA	NA	62320111	62263209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_-_62263389_62320088
tx.25541	chr10	-	1888	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	81.2991731541936	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTTGAGTATGACTT	NA	False	NA	NA	False	NA	NA	NA	67121130	67102468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_67103946_67105884_67105926_67111348_67111434_67120845
tx.25542	chr10	+	4491	9	ISM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-124	12337	-7	-12337	5prime_fragment	FALSE	canonical	3	56	junction_6	12.7027310055751	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGTTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	67815420	67865791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347
tx.25543	chr10	+	192	2	Antisense	novelGene_ENSMUSG00000111899.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATACTTACTCTCA	401	False	NA	NA	False	NA	NA	NA	69192496	69295276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr10_+_69192642_69295229
tx.25544	chr10	+	306	2	ISM	ENSMUSG00000069601.15	ENSMUST00000218194.2	1082	3	90	117871	90	-456	5prime_fragment	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGAAGATTAATGGTTA	NA	False	NA	NA	False	NA	NA	NA	69234692	69320097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_69234960_69320058
tx.25545	chr10	+	1918	9	NIC	ENSMUSG00000048701.14	novel	5511	9	NA	NA	-269	0	combination_of_known_junctions	TRUE	canonical	1	5	junction_8	7.81724855687728	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATGTAATTTGAAGTCT	6700	False	NA	NA	False	NA	NA	NA	69932681	70024017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70023756
tx.25546	chr10	+	4252	5	ISM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	172	8	172	-8	intron_retention	FALSE	canonical	3	72	junction_1	10.3531396204243	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCCAAGTCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	70081101	70121790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118
tx.25547	chr10	-	1955	10	NNC	ENSMUSG00000014329.15	novel	5431	21	NA	NA	-101	-18096	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	5.15919411833062	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGCCTTAGCGCCTTC	NA	False	NA	NA	False	NA	NA	NA	70995631	70788427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_70789013_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
tx.25549	chr10	-	2128	4	NIC	ENSMUSG00000033318.8	novel	1370	5	NA	NA	85	3	intron_retention	FALSE	canonical	3	39	junction_1	6.94422221866655	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTTTTCTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	75670630	75667675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_75667929_75668228_75668403_75668494_75669574_75670008
tx.2555	chr11	-	4976	28	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-16	-10	combination_of_known_splicesites	FALSE	canonical	3	41	junction_15	49.7087263565917	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAACGCTGTGGGC	NA	False	NA	NA	False	NA	NA	NA	33463762	33161804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
tx.25550	chr10	+	1373	7	FSM	ENSMUSG00000009092.6	ENSMUST00000009236.6	1321	7	-52	0	-52	0	multi-exon	FALSE	canonical	2	8	junction_5	4.01732359773132	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTCAATATGTTAGT	NA	False	NA	NA	False	NA	NA	NA	75729194	75731775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_75729352_75729452_75729519_75729603_75729678_75729800_75729895_75730265_75730462_75730872_75730964_75731080
tx.25553	chr10	-	567	4	FSM	ENSMUSG00000020262.16	ENSMUST00000150227.8	3289	4	-26	2748	1	-10	multi-exon	FALSE	canonical	3	17	junction_1	14.8398861930347	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGAAAACCTTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	77254098	77161372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_77161526_77161699_77161775_77195400_77195570_77253928
tx.25554	chr10	-	1567	8	NNC	ENSMUSG00000000731.16	novel	1926	14	NA	NA	-25	526	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	7.19977323905952	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATCCAATCCCCACTG	NA	False	NA	NA	False	NA	NA	NA	77874119	77865329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77870542_77871490_77871668_77872518_77872619_77873706_77873823_77874074
tx.25555	chr10	-	5059	23	FSM	ENSMUSG00000000374.9	ENSMUST00000000384.8	5047	23	-15	3	-15	-3	multi-exon	FALSE	canonical	2	6	junction_11	3.08823413662964	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATGTATTTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	78080490	78022561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_78023929_78024589_78024785_78029192_78029371_78032121_78032293_78033571_78033699_78034877_78034979_78036451_78036682_78037265_78037425_78038713_78038856_78039714_78040227_78043267_78043381_78043725_78043867_78045217_78045310_78046211_78046289_78046597_78046713_78047309_78047457_78050401_78050650_78052983_78053096_78056022_78056219_78058497_78058695_78064612_78064749_78067287_78067370_78080269
tx.25556	chr10	-	3788	12	NNC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	37	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	188.403821617291	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	NA	False	NA	NA	NA	78188239	78107387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78156492_78156629_78165109_78165171_78187460_78187546_78188046
tx.25557	chr10	+	1716	5	FSM	ENSMUSG00000020310.10	ENSMUST00000020554.8	1436	5	-280	0	-280	0	multi-exon	FALSE	canonical	2	3	junction_4	3.08220700148449	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGGCATATTCTTTCG	2875	False	NA	NA	False	NA	NA	NA	79500112	79504371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79500502_79500745_79501013_79501264_79501592_79502172_79502605_79504070
tx.25558	chr10	+	1277	5	FSM	ENSMUSG00000020307.16	ENSMUST00000219930.2	534	5	-287	-456	-20	2	multi-exon	FALSE	canonical	3	123	junction_4	797.39838694344	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	NA	False	NA	NA	NA	79518008	79524230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523689
tx.25559	chr10	+	1319	3	FSM	ENSMUSG00000020327.5	ENSMUST00000219228.2	2167	3	47	801	-14	273	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATGGTTGCTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	79590956	79593629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79591140_79592413_79592518_79592597
tx.2556	chr11	-	3959	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-16	1058	-16	-1058	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGCTTTCCACTGGC	NA	False	NA	NA	False	NA	NA	NA	33463762	33162852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
tx.25560	chr10	+	6324	7	FSM	ENSMUSG00000035863.15	ENSMUST00000218631.2	2725	7	-82	-3517	13	19	multi-exon	FALSE	canonical	3	162	junction_6	11.7862914721581	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGAGCCAGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	79629418	79656749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018
tx.25561	chr10	+	2477	5	FSM	ENSMUSG00000035852.12	ENSMUST00000219305.2	2569	5	55	37	-14	0	multi-exon	FALSE	canonical	2	3	junction_1	3.26917420765551	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	NA	False	NA	NA	NA	79658446	79666286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_79658570_79661529_79663269_79663711_79663846_79665226_79665266_79665844
tx.25562	chr10	-	1887	7	NIC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	145	junction_6	11.977989072554	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	9770	False	NA	NA	False	NA	NA	NA	79752752	79745885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79746974_79747775_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
tx.25563	chr10	+	2503	9	ISM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	-6	213	-6	0	intron_retention	FALSE	canonical	3	36	junction_1	19.7638400873919	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGGCTATGAGGGTGT	2641	False	NA	NA	False	NA	NA	NA	79951630	79966303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738
tx.25564	chr10	+	2509	10	NNC	ENSMUSG00000003068.18	novel	2566	10	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	26.9887951144247	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGGGCTGTTCTGTCC	2641	False	NA	NA	False	NA	NA	NA	79951630	79966517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965882_79966089
tx.25565	chr10	-	3111	10	FSM	ENSMUSG00000035640.19	ENSMUST00000105369.8	3121	10	12	-2	10	2	multi-exon	FALSE	canonical	2	9	junction_6	10.6817023658263	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTCTGGGTTTTCTC	9086	False	NA	NA	False	NA	NA	NA	79975187	79966382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972707_79972773_79972876_79973017_79973121_79973222_79974919
tx.25566	chr10	-	3356	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	12	0	intron_retention	FALSE	canonical	3	16	junction_9	8.743251365736	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9088	False	NA	NA	False	NA	NA	NA	79975185	79966384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
tx.25567	chr10	-	3941	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	10	junction_5	10.0492613818622	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGCTCTGGGTTTT	9060	False	NA	NA	False	NA	NA	NA	79975213	79966385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
tx.25569	chr10	+	3505	8	ISM	ENSMUSG00000035621.14	ENSMUST00000042057.12	3727	9	1554	0	-60	0	3prime_fragment	FALSE	canonical	3	9	junction_7	4.13052351280027	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGCCCCTGGCTGTTC	1002	False	NA	NA	False	NA	NA	NA	79985659	79994202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_79986148_79987211_79987300_79987494_79987558_79989424_79989554_79989649_79989968_79990164_79990307_79990967_79991241_79992198
tx.2557	chr11	-	3516	27	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-16	-1410	combination_of_known_splicesites	FALSE	canonical	3	45	junction_25	39.8224610285058	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTTTCAAGTCTATCT	NA	False	NA	NA	False	NA	NA	NA	33463762	33163204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
tx.25571	chr10	-	2884	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020377.13	2842	19	-27	-15	-1	15	multi-exon	FALSE	canonical	3	359	junction_12	305.080706788091	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCGTCATATTTCATGG	NA	False	NA	NA	False	NA	NA	NA	80269482	80245426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
tx.25572	chr10	+	1641	6	NNC	ENSMUSG00000055862.8	novel	1564	7	NA	NA	-33	0	intron_retention	FALSE	canonical	0	0	junction_5	9.54986910905066	2	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGGAACAATTCTTT	NA	False	NA	NA	False	NA	NA	NA	80538524	80541207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539763_80539872_80539921_80540235
tx.25573	chr10	+	1850	2	FSM	ENSMUSG00000015312.10	ENSMUST00000219449.2	667	2	-738	-445	1	0	multi-exon	FALSE	canonical	3	88	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	249	False	NA	NA	False	NA	NA	NA	80765907	80768038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_80767086_80767366
tx.25574	chr10	-	1984	10	ISM	ENSMUSG00000035041.9	ENSMUST00000117422.2	2294	12	6227	5	-72	-5	3prime_fragment	FALSE	canonical	0	0	junction_1	2.16595429884644	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGCTGCGGCTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	80928481	80920162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925279_80925910_80926018_80926971_80927270_80927631_80927764_80928336
tx.25575	chr10	+	1837	13	FSM	ENSMUSG00000004933.18	ENSMUST00000105328.10	2228	13	8	383	2	1	multi-exon	FALSE	canonical	2	5	junction_9	3.36237350030534	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGTCTGATGCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	81093140	81098816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_81093409_81094313_81094374_81095010_81095122_81095216_81095333_81095420_81095641_81095922_81096017_81096741_81096808_81097276_81097377_81097464_81097550_81097628_81097703_81097794_81097991_81098281_81098369_81098456
tx.25576	chr10	-	6316	10	NNC	ENSMUSG00000055053.19	novel	3348	10	NA	NA	-753	-5	intron_retention	TRUE	canonical	1	1	junction_9	9.94180598145224	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTCTTGGTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	81267592	81232024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81267473
tx.25577	chr10	+	2690	5	NNC	ENSMUSG00000078435.6	novel	2634	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.53553390593274	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTTTCTGTTTCTCCA	NA	False	NA	NA	False	NA	NA	NA	81963823	81988899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_81963933_81974086_81974214_81979420_81979454_81986050_81986112_81986539
tx.25578	chr10	-	4928	15	ISM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	20392	0	-28	0	3prime_fragment	FALSE	canonical	3	47	junction_9	7.76175868983207	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTCTCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	83349612	83323313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446
tx.25579	chr10	-	2398	3	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1012	2	intron_retention	FALSE	canonical	0	0	junction_2	1	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAGTCAAGCATCTGT	8447	False	NA	NA	False	NA	NA	NA	84390214	84383278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_-_84385495_84388511_84388575_84390095
tx.2558	chr11	-	3667	25	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-2	30720	-2	-30720	5prime_fragment	FALSE	canonical	3	105	junction_11	31.3773792811885	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGATTGATGTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	33463748	33192514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
tx.25580	chr10	-	1990	2	FSM	ENSMUSG00000050035.8	ENSMUST00000059383.8	3402	2	-21	1433	-21	261	multi-exon	FALSE	canonical	3	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCAGCTGACCTTTTC	NA	False	NA	NA	False	NA	NA	NA	84938380	84933583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_84935353_84938159
tx.25581	chr10	-	2160	2	FSM	ENSMUSG00000050035.8	ENSMUST00000216889.2	1860	2	-44	-256	-44	256	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAATTCTCAGCTGACC	NA	False	NA	NA	False	NA	NA	NA	84938403	84933588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_84935353_84938007
tx.25582	chr10	-	2999	2	FSM	ENSMUSG00000049038.4	ENSMUST00000214607.2	477	2	-1415	-1107	3	-8	multi-exon	FALSE	canonical	3	50	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGAACTATTATTCCAA	NA	False	NA	NA	False	NA	NA	NA	84963856	84955304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_84956679_84962231
tx.25584	chr10	+	4261	5	ISM	ENSMUSG00000020015.11	ENSMUST00000215495.2	1388	7	-197	4113	-197	-4113	5prime_fragment	FALSE	canonical	3	223	junction_1	22.7431308310883	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAATAGTGTTGTAGT	NA	False	NA	NA	False	NA	NA	NA	92996539	93057117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825
tx.25585	chr10	+	5453	5	ISM	ENSMUSG00000020020.9	ENSMUST00000216224.2	2449	6	11969	-3254	11969	3254	3prime_fragment	FALSE	canonical	3	14	junction_3	3.11247489949718	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTTTTAATAGTCATCT	2917	False	NA	NA	False	NA	NA	NA	93681648	93697204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
tx.25586	chr10	-	1601	2	ISM	ENSMUSG00000045867.11	ENSMUST00000218761.2	2663	3	-137	110895	-5	305	5prime_fragment	FALSE	canonical	3	29	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAACAACAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95160000	95157304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_95158752_95159846
tx.25587	chr10	+	3752	2	NIC	ENSMUSG00000112400.2	novel	858	3	NA	NA	-2041	318	intron_retention	FALSE	canonical	3	133	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGGCAGAAAACAAATGC	NA	False	NA	NA	False	NA	NA	NA	95727263	95733437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_+_95730152_95732573
tx.25588	chr10	+	1132	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	48	327	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	59.5	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGCAGCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	95729352	95733446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_95729523_95730062_95730152_95732573
tx.25589	chr10	-	1375	2	FSM	ENSMUSG00000112082.2	ENSMUST00000218838.2	628	2	-15	-732	-15	732	multi-exon	FALSE	canonical	1	2	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACAGTGCTTCCTTGTA	NA	False	NA	NA	False	NA	NA	NA	99296107	99287783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_99289098_99296046
tx.2559	chr11	-	3197	16	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-16	115460	-16	-24488	5prime_fragment	FALSE	canonical	3	105	junction_2	33.0866874874003	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGTGCTGAAATACTCT	NA	False	NA	NA	False	NA	NA	NA	33463762	33277254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
tx.25590	chr10	+	1182	2	Genic_Genomic	ENSMUSG00000091552.3	novel	883	1	NA	NA	-974	207	multi-exon	FALSE	canonical	1	2	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGTGGATAAATAGT	NA	False	NA	NA	False	NA	NA	NA	100191122	100193186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr10_+_100191191_100192072
tx.25591	chr10	+	3278	3	ISM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	35415	1	17027	-1	3prime_fragment	FALSE	canonical	3	28	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTACTTGTAAAACATTT	NA	False	NA	NA	False	NA	NA	NA	110616743	110623244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_110616884_110618058_110618481_110620528
tx.25592	chr10	+	4017	2	ISM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	35844	8	17456	-8	3prime_fragment	FALSE	canonical	3	28	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTATATTACTTGTAA	NA	False	NA	NA	False	NA	NA	NA	110617172	110623237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_+_110618481_110620528
tx.25593	chr10	-	3602	6	ISM	ENSMUSG00000035798.15	ENSMUST00000041723.15	4548	17	60028	-1	-2341	1	3prime_fragment	FALSE	canonical	3	25	junction_1	1.83303027798234	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTCTGCTCAGTTCA	NA	False	NA	NA	False	NA	NA	NA	110785899	110777639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481
tx.25594	chr10	-	1220	2	FSM	ENSMUSG00000020137.6	ENSMUST00000020346.6	3681	2	-149	2610	-116	-2610	multi-exon	FALSE	canonical	1	1	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTGTTTCTTTGTTTT	2244	False	NA	NA	False	NA	NA	NA	115220464	115207986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_115208852_115220109
tx.25595	chr10	-	3976	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	4	1817	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTGTCAAAGCCCT	4478	False	NA	NA	False	NA	NA	NA	117212871	117183126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.25596	chr10	-	4023	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	1	1750	combination_of_known_junctions	FALSE	canonical	3	61	junction_6	232.89227123286	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGCAGTGTCTCCTA	4475	False	NA	NA	False	NA	NA	NA	117212874	117183193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.25597	chr10	-	8323	9	NIC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	-2	67	intron_retention	FALSE	canonical	3	201	junction_1	139.150772545466	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAGCTCTACTTTTATT	4513	False	NA	NA	False	NA	NA	NA	117212836	117185211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.25598	chr10	-	7778	4	NIC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-8	3	intron_retention	FALSE	canonical	3	51	junction_3	7.40870359029762	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTGATAAGCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	117582278	117569580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_117576500_117576657_117576817_117580789_117580901_117581689
tx.256	chr1	+	4214	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	-4	941	-4	-83	multi-exon	FALSE	canonical	3	19	junction_12	6.79038842777054	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTATGAGTTGGTTTA	3259	False	NA	NA	False	NA	NA	NA	52158609	52200083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
tx.2560	chr11	-	5983	15	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	-53	61241	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	55.9057607195596	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGTTTCATTCTTT	NA	False	NA	NA	False	NA	NA	NA	33463799	33361174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_33365268_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
tx.25600	chr10	+	6073	8	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_7	30.6913535653524	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAATTTTTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	120359252	120378814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120373440
tx.25601	chr10	-	5729	6	ISM	ENSMUSG00000020121.16	ENSMUST00000161996.2	1714	7	2079	-4247	2079	-2	3prime_fragment	FALSE	canonical	3	41	junction_2	6.04648658313239	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGCCTTTGTCTGCTCGTG	NA	False	NA	NA	False	NA	NA	NA	121640930	121616897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720
tx.25602	chr10	-	2604	4	NIC	ENSMUSG00000034620.18	novel	4793	6	NA	NA	17	5	intron_retention	FALSE	canonical	3	258	junction_3	23.6830928911088	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAACTATCATATGCCAG	NA	False	NA	NA	False	NA	NA	NA	121933014	121924544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_121926680_121930494_121930598_121931843_121932000_121932804
tx.25603	chr10	-	925	6	FSM	ENSMUSG00000025436.13	ENSMUST00000026504.13	903	6	-25	3	-25	-3	multi-exon	FALSE	canonical	3	15	junction_1	67.2767418949521	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTGTTTGACACATT	NA	False	NA	NA	False	NA	NA	NA	126737249	126704298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_126704595_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
tx.25604	chr10	-	3394	14	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	9	0	9	0	intron_retention	FALSE	canonical	3	18	junction_9	9.13864283684445	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6193	False	NA	NA	False	NA	NA	NA	127024632	127018394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976
tx.25605	chr10	-	2634	14	NIC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	-45	0	intron_retention	FALSE	canonical	3	18	junction_8	9.21922354866377	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6139	False	NA	NA	False	NA	NA	NA	127024686	127018394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
tx.25606	chr10	-	3412	8	ISM	ENSMUSG00000025409.15	ENSMUST00000026476.13	4165	13	2415	1	-575	-1	3prime_fragment	FALSE	canonical	3	40	junction_5	32.6096267243592	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTGACTCTGTACTCAT	NA	False	NA	NA	False	NA	NA	NA	127122344	127117825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120566_127121226_127121400
tx.25607	chr10	-	2068	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	44	177	1	-177	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	625	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	NA	False	NA	NA	NA	127358269	127353184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
tx.25608	chr10	-	2754	11	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	471	194	449	-178	3prime_fragment	FALSE	canonical	3	1924	junction_2	84.2508753663723	14	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	NA	False	NA	NA	NA	127357784	127353185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786
tx.25609	chr10	-	6526	41	ISM	ENSMUSG00000040249.16	ENSMUST00000049149.15	14888	89	63571	-4	-7660	4	3prime_fragment	FALSE	canonical	3	22	junction_39	13.3701159306866	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTGTCTGCATGCTA	NA	False	NA	NA	False	NA	NA	NA	127393446	127374025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522_127391714_127391859_127392001_127392078_127392202_127392476_127392606_127392752_127392870_127393062_127393186_127393280
tx.2561	chr11	-	2246	13	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	-5	2795	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	56.7731230425102	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTATATTGCTTT	NA	False	NA	NA	False	NA	NA	NA	33463751	33419620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_33420267_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
tx.25610	chr10	+	2680	19	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.0851081808844	5	3	1	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTTTATTTTATAT	NA	False	NA	NA	False	NA	NA	NA	128030306	128045808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr10_+_128030777_128030961_128031050_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
tx.25611	chr10	-	1609	5	FSM	ENSMUSG00000039914.7	ENSMUST00000043211.7	1421	5	-186	-2	-143	2	multi-exon	FALSE	canonical	3	7	junction_3	37.9629753839185	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCATTTTTTGAGGG	6796	False	NA	NA	False	NA	NA	NA	128205009	128198966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_-_128199661_128200273_128200376_128200891_128201115_128203875_128204023_128204566
tx.25612	chr10	+	1189	3	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	2	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAGGAGCAAATTTGA	NA	False	NA	NA	False	NA	NA	NA	128334817	128338833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr10_+_128335396_128337503_128337559_128338277
tx.25613	chr10	-	4103	2	ISM	ENSMUSG00000002578.19	ENSMUST00000133342.10	5150	8	10071	-3	8728	3	3prime_fragment	FALSE	canonical	3	4	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGTTCTTGAAGACTC	NA	False	NA	NA	False	NA	NA	NA	128471789	128466708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr10_-_128470681_128471658
tx.25614	chr10	+	1275	3	FSM	ENSMUSG00000112742.2	ENSMUST00000218557.2	415	3	-10	-850	-10	850	multi-exon	FALSE	canonical	3	54	junction_1	6.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGAGTCCTCTTTACAA	NA	False	NA	NA	False	NA	NA	NA	130378205	130408512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr10_+_130378320_130407161_130407289_130407478
tx.25615	chr11	+	3648	3	NNC	ENSMUSG00000047205.13	novel	4632	2	NA	NA	-15	-438	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGACCTATGACTTT	5230	False	NA	NA	False	NA	NA	NA	3845224	3850858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_3845518_3846942_3847771_3848331
tx.25616	chr11	+	1912	4	FSM	ENSMUSG00000049721.15	ENSMUST00000063004.14	1879	4	-24	-9	-24	-2	multi-exon	FALSE	canonical	0	0	junction_1	5.18544972870135	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTTTTTTTTTTGT	8648	False	NA	NA	False	NA	NA	NA	3933688	3949324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_3933841_3934940_3935159_3946908_3947052_3947925
tx.25617	chr11	-	2193	5	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	-72	16924	-72	-3643	5prime_fragment	FALSE	canonical	3	52	junction_1	5.04975246918104	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGATTTTTGGTCTTG	NA	False	NA	NA	False	NA	NA	NA	5211630	5158475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
tx.25618	chr11	+	179	2	Antisense	novelGene_ENSMUSG00000020482.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTCTTAACTAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	5485387	5486040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_5485471_5485944
tx.25619	chr11	-	3666	6	FSM	ENSMUSG00000049680.18	ENSMUST00000120306.8	3972	6	294	12	294	4	multi-exon	FALSE	canonical	2	4	junction_5	21.2414688757628	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTGAATGTATACTCAA	NA	False	NA	NA	False	NA	NA	NA	5712077	5664982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5711880
tx.2562	chr11	+	2854	7	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_5	7.29725975966321	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCGCTTGTCCGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	33484758	33525656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33517192_33517308_33522276_33522430_33522885_33523021_33523781
tx.25620	chr11	+	1499	4	Antisense	novelGene_ENSMUSG00000049680.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	2.05480466765633	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAATTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	5667593	5672001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_5667789_5668035_5668211_5670762_5671397_5671506
tx.25621	chr11	+	1783	2	ISM	ENSMUSG00000083844.9	ENSMUST00000131130.8	595	3	-23	366	-2	-2	5prime_fragment	FALSE	canonical	3	28	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTGTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	5712126	5731874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_5712241_5730205
tx.25622	chr11	-	4890	6	ISM	ENSMUSG00000020474.12	ENSMUST00000020767.4	2924	11	3290	1	1759	-1	3prime_fragment	FALSE	canonical	3	32	junction_5	3.65513337649941	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATAGTTTTACAAGTTT	3670	False	NA	NA	False	NA	NA	NA	5784726	5777861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659
tx.25623	chr11	-	478	4	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	744	2	744	-2	3prime_fragment	FALSE	canonical	3	77	junction_3	8.80656320908194	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGGTGTTGGCTTGAC	NA	False	NA	NA	False	NA	NA	NA	5848038	5846638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831
tx.25624	chr11	-	945	6	ISM	ENSMUSG00000020437.13	ENSMUST00000003459.4	3307	22	10665	5	-1608	-5	3prime_fragment	FALSE	canonical	3	8	junction_3	3.74165738677394	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGGCTGCCACTG	9686	False	NA	NA	False	NA	NA	NA	6460293	6456552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_6456833_6456906_6457062_6457868_6457983_6458189_6458295_6459324_6459470_6460147
tx.25625	chr11	+	5055	13	ISM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	75560	5632	-20833	-5	3prime_fragment	FALSE	canonical	3	16	junction_9	3.05845821725043	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTATTATATTGCCT	NA	False	NA	NA	False	NA	NA	NA	7089048	7122874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
tx.25626	chr11	+	3983	7	NNC	ENSMUSG00000018654.18	novel	242	3	NA	NA	-392	-67	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.15470053837925	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGCTGTATCAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	11635532	11722045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_11635751_11650204_11650259_11657784_11657905_11704006_11704175_11708194_11708318_11711218_11711354_11718880
tx.25627	chr11	+	4063	8	NNC	ENSMUSG00000018654.18	novel	242	3	NA	NA	-211	-67	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.38505138783324	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGCTGTATCAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	11635713	11722045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_11635751_11650204_11650259_11657784_11657905_11698310_11698572_11704006_11704175_11708194_11708318_11711218_11711354_11718880
tx.25628	chr11	-	500	3	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	15	junction_2	26	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTTTTCTTTTTTA	266	False	NA	NA	False	NA	NA	NA	20089376	20087208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_20087398_20088488_20088566_20089142
tx.25629	chr11	-	265	2	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACAACATGTTGTTTTT	1642	False	NA	NA	False	NA	NA	NA	20088000	20087216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_20087398_20087916
tx.2563	chr11	-	1413	4	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_2	5.79271573232759	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGGCTCAAAATCGTG	NA	False	NA	NA	False	NA	NA	NA	33494460	33487369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_33487917_33490994_33491103_33492017_33492568_33494252
tx.25630	chr11	-	6099	4	NIC	ENSMUSG00000042363.15	novel	3362	5	NA	NA	12	-4	intron_retention	FALSE	canonical	3	286	junction_3	14.8847423745107	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAGCTTCTGGGTTATT	NA	False	NA	NA	False	NA	NA	NA	20781044	20773579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_20779447_20780037_20780127_20780275_20780348_20780973
tx.25631	chr11	-	692	2	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTTGGTTCCATTTC	NA	False	NA	NA	False	NA	NA	NA	22560633	22550330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_22550607_22560217
tx.25633	chr11	+	2040	11	FSM	ENSMUSG00000020467.16	ENSMUST00000020759.12	2037	11	-13	10	-13	-10	multi-exon	FALSE	canonical	0	0	junction_10	1.00498756211209	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGAATCTGCCATGT	NA	False	NA	NA	False	NA	NA	NA	28803190	28876733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_28803325_28804464_28804555_28817465_28817515_28817652_28818040_28860609_28860733_28864587_28864708_28865660_28865781_28866849_28866970_28871402_28871527_28871610_28871807_28876156
tx.25634	chr11	+	5262	2	FSM	ENSMUSG00000043999.7	ENSMUST00000109430.2	2926	2	21	-2357	21	2357	multi-exon	FALSE	canonical	2	6	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTTGGGGGGGGTTGG	4085	False	NA	NA	False	NA	NA	NA	30835378	30846086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_30835543_30840988
tx.25635	chr11	-	4162	13	ISM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	-196	1389	-13	-412	5prime_fragment	FALSE	canonical	2	57	junction_7	15.9919684703152	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCTTTTATATGGGTG	NA	False	NA	NA	False	NA	NA	NA	30904348	30882162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
tx.25636	chr11	+	4966	6	ISM	ENSMUSG00000020300.15	ENSMUST00000155278.2	5281	9	47179	-1	47179	1	3prime_fragment	FALSE	canonical	3	21	junction_3	6.85273667960473	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTACTATACTTATT	NA	False	NA	NA	False	NA	NA	NA	31870453	31885635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
tx.25637	chr11	-	3353	17	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_2	20.1392612513468	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	NA	False	NA	NA	NA	32172274	32159585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
tx.25638	chr11	+	3330	8	ISM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	70615	-8	15325	8	3prime_fragment	FALSE	canonical	3	14	junction_3	24.8292125513148	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTTGTTCTTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	32553919	32574595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
tx.25639	chr11	-	1968	5	FSM	ENSMUSG00000057967.13	ENSMUST00000020507.8	1086	5	-422	-460	-422	460	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGAAGAGTGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	33097822	33066969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_33068032_33074612_33074720_33084202_33084384_33097044_33097082_33097241
tx.2564	chr11	-	2516	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	-8	-3	-8	3	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	250	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATTTTTTAATTCT	NA	False	NA	NA	False	NA	NA	NA	34724476	34700013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
tx.25640	chr11	-	3900	13	NIC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	-6	32761	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	48.2823725597655	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAATTAGTTTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	33463752	33389654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
tx.25641	chr11	-	985	2	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATCATTATTTAAT	NA	False	NA	NA	False	NA	NA	NA	33487242	33482576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_33483454_33487134
tx.25642	chr11	-	3205	10	FSM	ENSMUSG00000020159.9	ENSMUST00000020366.8	3280	10	-26	101	-24	-101	multi-exon	FALSE	canonical	0	0	junction_2	0.831479419283098	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAATGTTTAAAA	8459	False	NA	NA	False	NA	NA	NA	33528983	33500881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_33502843_33504293_33504482_33504967_33505121_33506929_33507068_33513865_33513949_33517212_33517431_33518066_33518135_33522372_33522492_33523317_33523417_33528805
tx.25643	chr11	+	4571	31	ISM	ENSMUSG00000056427.11	ENSMUST00000069837.4	5228	36	423382	4	-79	-4	3prime_fragment	TRUE	canonical	1	2	junction_11	2.50532765654847	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGGATAAGGGTAGAGAA	NA	False	NA	NA	False	NA	NA	NA	35435432	35599330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_35435628_35455451_35455524_35461394_35461559_35469792_35469935_35479759_35479832_35485788_35485861_35490242_35490315_35501418_35501563_35503099_35503264_35512834_35512986_35514267_35514343_35520549_35520694_35521669_35521814_35523538_35523703_35524728_35524862_35539859_35539929_35541926_35541999_35542574_35542647_35550165_35550238_35552012_35552177_35554888_35555014_35560900_35560999_35566671_35566812_35570228_35570323_35574863_35575002_35577082_35577324_35579379_35579511_35589132_35589288_35591030_35591317_35593938_35594148_35598733
tx.25645	chr11	-	826	2	FSM	ENSMUSG00000069899.4	ENSMUST00000154156.2	784	2	-27	-15	-27	1	multi-exon	FALSE	canonical	3	114	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGACAGAGAGAGAGAGAAA	1760	False	NA	NA	False	NA	NA	NA	45943175	45942179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_45942889_45943058
tx.25646	chr11	-	2712	5	NIC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	-189	1	intron_retention	FALSE	canonical	3	31	junction_4	5.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTGGACTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	48707247	48697229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_48698674_48698951_48699315_48699876_48700108_48703126_48703223_48706669
tx.25647	chr11	-	5561	4	NIC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	408	0	intron_retention	FALSE	canonical	3	39	junction_3	2.86744175568088	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	48706650	48697230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_48698674_48698951_48699315_48699876_48700108_48703126
tx.25648	chr11	-	5983	5	ISM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	896	0	-226	0	intron_retention	FALSE	canonical	3	37	junction_2	3.39116499156263	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	48707284	48697230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126
tx.25649	chr11	-	2967	7	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	-30	0	intron_retention	FALSE	canonical	2	2	junction_1	14.5306190125847	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	48707810	48697230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_48698403_48698497_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
tx.2565	chr11	+	856	4	ISM	ENSMUSG00000056427.11	ENSMUST00000069837.4	5228	36	-152	473599	-152	-299	5prime_fragment	FALSE	canonical	2	3	junction_3	1.69967317119759	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGCATTCATTTGTA	NA	False	NA	NA	False	NA	NA	NA	35011898	35125735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_35012539_35062399_35062472_35068609_35068682_35125663
tx.25650	chr11	+	2885	7	FSM	ENSMUSG00000040350.17	ENSMUST00000046903.6	2161	7	-92	-632	-92	0	multi-exon	TRUE	canonical	1	1	junction_1	1.5723301886761	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGGGTGTCTGGAC	NA	False	NA	NA	False	NA	NA	NA	48728199	48742014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_48728873_48729663_48729760_48736262_48736494_48738341_48738365_48738851_48738968_48739399_48739436_48740304
tx.25651	chr11	-	5830	13	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	78.8924637296449	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAAGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	49603539	49562332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49598230_49598354_49603180
tx.25652	chr11	-	4377	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-1	-1036	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	87.4666406302454	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTAATTTCAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	49603538	49563365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580086_49593367_49593482_49603398
tx.25653	chr11	-	5647	6	NNC	ENSMUSG00000050567.17	novel	5528	5	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	25.7029181222678	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCACAAGCATGTTTGA	NA	False	NA	NA	False	NA	NA	NA	50183141	50146464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50181381_50181502_50182552
tx.25654	chr11	+	3834	5	FSM	ENSMUSG00000020364.15	ENSMUST00000102766.10	2592	5	9	-1251	7	-186	multi-exon	FALSE	canonical	2	7	junction_3	1.29903810567666	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCTCCGTTGAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	50950092	50963440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_50950230_50950898_50950982_50951686_50951814_50952229_50952326_50960049
tx.25655	chr11	+	2630	5	FSM	ENSMUSG00000020364.15	ENSMUST00000109122.8	4165	5	-10	1545	-10	-108	multi-exon	FALSE	canonical	1	1	junction_2	2.77263412660235	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCTTAAGTCTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	50950110	50962081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_50950230_50950612_50950869_50951686_50951814_50952229_50952326_50960049
tx.25656	chr11	+	3596	3	NIC	ENSMUSG00000052563.14	novel	3426	4	NA	NA	-48	0	intron_retention	FALSE	canonical	3	17	junction_1	1.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	NA	False	NA	NA	NA	51541732	51548507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_51542041_51544560_51544941_51545599
tx.25657	chr11	-	6024	12	ISM	ENSMUSG00000020387.16	ENSMUST00000109091.2	6099	13	2427	-9	2156	4	3prime_fragment	FALSE	canonical	0	0	junction_11	5.3397000565776	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGACGTTCTGTTGTG	9865	False	NA	NA	False	NA	NA	NA	51745796	51704277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706
tx.25658	chr11	-	6116	13	NIC	ENSMUSG00000020387.16	novel	6099	13	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	6.44204936336256	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGACGTTCTGTTGTG	8876	False	NA	NA	False	NA	NA	NA	51747952	51704277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706_51745795_51747858
tx.25659	chr11	-	6352	13	FSM	ENSMUSG00000020387.16	ENSMUST00000109091.2	6099	13	-251	-2	6	2	multi-exon	FALSE	canonical	0	0	junction_11	6.12145589073565	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGCCATGACGTTC	8354	False	NA	NA	False	NA	NA	NA	51748474	51704284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706_51745795_51748137
tx.2566	chr11	+	1964	4	NNC	ENSMUSG00000056427.11	novel	5228	36	NA	NA	-177	-56013	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.86744175568088	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTCTTGCCTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	35011873	35070021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_35012539_35062399_35062472_35068609_35068682_35068866
tx.25660	chr11	-	4883	2	Genic_Genomic	ENSMUSG00000081297.2	novel	596	1	NA	NA	-4225	1195	multi-exon	FALSE	canonical	2	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTTGTAGTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	52374155	52368139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr11_-_52368313_52369445
tx.25662	chr11	-	3194	10	NNC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-118	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.3865851328506	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATACCAATTGAATACAAT	NA	False	NA	NA	False	NA	NA	NA	53782604	53755372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766815_53766990_53774486_53774591_53781972
tx.25663	chr11	-	3032	9	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-81	-7	combination_of_known_splicesites	FALSE	canonical	3	5	junction_8	10.2339813855606	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	NA	NA	NA	53782567	53755374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53781972
tx.25664	chr11	+	3410	3	FSM	ENSMUSG00000018906.15	ENSMUST00000139315.2	1997	3	-1426	13	-1426	0	multi-exon	FALSE	canonical	3	70	junction_2	1	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAATAGCCTTATTTT	NA	False	NA	NA	False	NA	NA	NA	54017092	54022478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_54019943_54020291_54020389_54022015
tx.25665	chr11	-	1653	5	NIC	ENSMUSG00000020268.15	novel	3431	5	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	62.9503772824278	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACAGAGAAGTGATTTC	NA	False	NA	NA	False	NA	NA	NA	54751421	54730642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_54732029_54739404_54739487_54741170_54741239_54744052_54744126_54751377
tx.25666	chr11	-	1412	7	FSM	ENSMUSG00000049588.14	ENSMUST00000055040.13	1402	7	-9	-1	-9	1	multi-exon	FALSE	canonical	0	0	junction_5	2.51661147842358	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGTGTATTTCATTCT	4844	False	NA	NA	False	NA	NA	NA	54968942	54940555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_54941385_54941977_54942076_54943173_54943294_54943720_54943823_54945797_54945872_54951286_54951372_54968838
tx.25667	chr11	-	8169	15	ISM	ENSMUSG00000055333.15	ENSMUST00000108864.2	14423	23	28616	-1	28616	0	3prime_fragment	FALSE	canonical	1	2	junction_7	2.78846018513473	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGTCGCTTAGAGC	NA	False	NA	NA	False	NA	NA	NA	55174467	55141434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_55143325_55144349_55144808_55146929_55147084_55147329_55147772_55151271_55151418_55152887_55153699_55156687_55156886_55158402_55158547_55159000_55159139_55160079_55160295_55160911_55161296_55163820_55164055_55166809_55166964_55169712_55169910_55171863
tx.25668	chr11	-	2134	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	-19	0	-17	0	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3839	False	NA	NA	False	NA	NA	NA	55310743	55285325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
tx.25669	chr11	-	2574	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	-18	1	-18	-1	multi-exon	TRUE	canonical	3	63	junction_13	118.75144346678	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCGTGGTATTTAATAG	NA	False	NA	NA	False	NA	NA	NA	57409461	57373819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
tx.2567	chr11	+	7276	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	98	2	98	-2	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTCCTGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	35660408	35682110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
tx.25670	chr11	+	4298	6	NNC	ENSMUSG00000036819.15	novel	4351	6	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.0326036053925	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGTAACCCCAGCACTT	9515	False	NA	NA	False	NA	NA	NA	59340904	59349297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_59341339_59341500_59341667_59344336_59344472_59344634_59344886_59345758_59345906_59346132
tx.25671	chr11	+	5122	3	ISM	ENSMUSG00000072893.13	ENSMUST00000145533.8	1883	5	692	-1247	224	1247	intron_retention	FALSE	canonical	3	10	junction_2	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCTAAGTAGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	59397202	59403146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_59397713_59398016_59398139_59398656
tx.25673	chr11	+	1239	4	NIC	ENSMUSG00000032615.15	novel	1306	5	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	26.0426999794995	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	1725	False	NA	NA	False	NA	NA	NA	59738904	59767359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_59739199_59743616_59743718_59765378_59765494_59766630
tx.25674	chr11	+	2500	5	FSM	ENSMUSG00000032615.15	ENSMUST00000137695.2	1387	5	179	-1292	179	1292	multi-exon	FALSE	canonical	2	6	junction_1	25.8976350271603	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTATATTTTTTAAG	1929	False	NA	NA	False	NA	NA	NA	59739108	59768651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59739311_59743616_59743718_59751575_59751637_59765378_59765494_59766630
tx.25675	chr11	+	1917	5	FSM	ENSMUSG00000062115.16	ENSMUST00000149770.8	1823	5	-94	0	-94	0	multi-exon	FALSE	canonical	1	6	junction_2	6.75925291729789	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGCCTGTGGATGCC	NA	False	NA	NA	False	NA	NA	NA	59995744	60090023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59996221_60031066_60031197_60084764_60084859_60088614_60088665_60088856
tx.25676	chr11	-	197	2	Antisense	novelGene_ENSMUSG00000062115.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	663	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGACTATCCTTGATCC	NA	False	NA	NA	False	NA	NA	NA	60056551	60042257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_60042403_60056499
tx.25677	chr11	+	4378	2	ISM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	18746	3	18746	-1	3prime_fragment	FALSE	canonical	3	20	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGCGGCCTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	60085450	60090020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_60088665_60088856
tx.25678	chr11	+	2525	2	ISM	ENSMUSG00000056598.17	ENSMUST00000070805.13	2061	7	-244	15726	-244	-15726	5prime_fragment	FALSE	canonical	2	6	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATGTACTTTTCAGATA	3177	False	NA	NA	False	NA	NA	NA	60243910	60247104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_60244259_60244927
tx.25679	chr11	+	7956	2	NNC	ENSMUSG00000049323.9	novel	7391	2	NA	NA	59	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGCATCTGGGTTCCTA	NA	False	NA	NA	False	NA	NA	NA	60668409	60679105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_60671840_60674579
tx.2568	chr11	-	2107	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	2	0	2	0	multi-exon	FALSE	canonical	3	825	junction_11	73.3093807511866	1215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	35725331	35699207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
tx.25680	chr11	-	3738	4	NIC	ENSMUSG00000001034.18	novel	3255	6	NA	NA	-27	-5	intron_retention	FALSE	canonical	3	225	junction_2	12.1928941054479	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385041	61379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729
tx.25681	chr11	-	5375	4	ISM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	-26	0	-26	0	intron_retention	FALSE	canonical	3	222	junction_3	59.5781466273965	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	NA	False	NA	NA	NA	62172227	62158049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443
tx.25682	chr11	+	4435	8	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-22	559	intron_retention	FALSE	canonical	2	6	junction_5	64.9857127155105	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTGGAAAATTGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	62172276	62206631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62199867_62200020_62203841_62204005_62204835
tx.25683	chr11	+	2316	2	FSM	ENSMUSG00000048497.12	ENSMUST00000062860.5	343	2	-478	-1495	-478	0	multi-exon	FALSE	canonical	3	15	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	62539011	62557180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62539643_62555495
tx.25684	chr11	-	178	2	Antisense	novelGene_ENSMUSG00000064692.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACATACATAAA	NA	False	NA	NA	False	NA	NA	NA	62804143	62610683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_62610782_62804063
tx.25686	chr11	+	4060	4	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	-8	-11	intron_retention	FALSE	canonical	3	643	junction_2	8.25967446224258	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTGAATACTGTGGT	NA	False	NA	NA	False	NA	NA	NA	68936488	68942479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_68939471_68939556_68939706_68941127_68941303_68941725
tx.25687	chr11	+	961	4	NIC	ENSMUSG00000020895.15	novel	779	5	NA	NA	1	-2	intron_retention	FALSE	canonical	3	348	junction_3	26.9814751264641	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGGCGTATACTATTT	4653	False	NA	NA	False	NA	NA	NA	68961637	68963854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_68962118_68962199_68962301_68963248_68963346_68963571
tx.25688	chr11	-	6695	14	ISM	ENSMUSG00000032782.20	ENSMUST00000123176.8	3776	18	-56	19	-56	-19	intron_retention	FALSE	canonical	3	95	junction_12	13.0374971279363	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTGTATAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	69214657	69190331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178
tx.25689	chr11	+	354	2	Antisense	novelGene_ENSMUSG00000005237.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATAAATAAATAACAAATC	9153	False	NA	NA	False	NA	NA	NA	69432489	69432882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_69432769_69432807
tx.2569	chr11	-	4535	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	-5	1	-5	-1	multi-exon	FALSE	canonical	3	205	junction_16	29.6517319327484	522	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	8112	False	NA	NA	False	NA	NA	NA	35871359	35729227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
tx.25690	chr11	-	3109	7	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	576	4	538	-4	intron_retention	TRUE	canonical	2	6	junction_6	6.60176744011279	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTTTTGTCTATTT	9887	False	NA	NA	False	NA	NA	NA	69686193	69674865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_69675588_69675875_69676024_69676532_69676706_69677706_69677931_69683524_69683735_69684290_69684439_69684709
tx.25691	chr11	-	4304	6	NIC	ENSMUSG00000051790.16	novel	5003	7	NA	NA	57	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	5.6	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGTTGTCTCCTGTCG	9992	False	NA	NA	False	NA	NA	NA	69725028	69713948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_69716906_69717569_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69724807
tx.25692	chr11	-	4179	8	NNC	ENSMUSG00000001583.14	novel	2778	14	NA	NA	87	2418	intron_retention	FALSE	canonical	0	0	junction_7	8.94198991687361	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGATTGCTTGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	69746341	69739412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746312
tx.25693	chr11	+	5237	4	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	40	-2	intron_retention	FALSE	canonical	3	80	junction_2	5.43650214343336	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGGTCTCTGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	69826661	69832429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_69831258_69831415_69831594_69831871_69831957_69832051
tx.25694	chr11	+	1217	3	ISM	ENSMUSG00000040950.14	ENSMUST00000108584.2	1307	8	1981	-255	1981	0	3prime_fragment	FALSE	canonical	1	4	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTAGCTCCATTTCT	145	False	NA	NA	False	NA	NA	NA	70026979	70028376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_70027164_70027266_70027419_70027495
tx.25695	chr11	+	3639	24	NIC	ENSMUSG00000020828.14	novel	3659	25	NA	NA	112	0	combination_of_known_splicesites	TRUE	canonical	2	6	junction_9	5.25817394108515	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	70431001	70448936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
tx.25696	chr11	+	4258	23	FSM	ENSMUSG00000020821.18	ENSMUST00000094499.11	5168	23	-47	957	-34	-957	multi-exon	FALSE	canonical	0	0	junction_1	1.80220250923627	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGTGGTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	70591339	70620256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70591536_70593197_70593378_70593597_70593732_70594093_70594171_70594524_70594705_70595283_70595350_70595724_70595904_70595995_70596108_70596506_70596585_70596725_70596792_70596878_70596955_70597506_70597586_70597766_70597913_70599267_70599438_70599604_70599685_70599776_70599853_70608244_70608325_70609824_70609920_70614873_70614958_70615647_70615835_70615929_70616003_70616713_70617329_70619027
tx.25697	chr11	+	3609	4	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-22	-4	intron_retention	FALSE	canonical	0	0	junction_1	109.060635530068	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCATGTTTTTAGAT	NA	False	NA	NA	False	NA	NA	NA	71933305	71938192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_71936085_71936504_71936601_71937165_71937220_71937512
tx.25698	chr11	-	4217	19	NNC	ENSMUSG00000107877.3	novel	7987	19	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	6.9602043392737	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	NA	False	NA	NA	NA	72097864	72044922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72097801
tx.25699	chr11	-	4558	20	NNC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	-64	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	7.36165102522352	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGTCTATTTGAAGT	NA	False	NA	NA	False	NA	NA	NA	72098349	72044926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72053568_72053649_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72098021
tx.257	chr1	-	4964	18	FSM	ENSMUSG00000026103.15	ENSMUST00000114513.9	4966	18	1	1	1	-1	multi-exon	FALSE	canonical	3	13	junction_3	80.7225587298202	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAGAAAAAGTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	52272381	52202607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_52205474_52207494_52207559_52207643_52207721_52208055_52208118_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
tx.2570	chr11	-	4517	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_16	56.5216991901238	36	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	8100	False	NA	NA	False	NA	NA	NA	35871371	35729227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780116_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
tx.25700	chr11	+	6363	36	ISM	ENSMUSG00000055670.15	ENSMUST00000069395.7	11150	55	-45	37471	-45	-29247	5prime_fragment	FALSE	canonical	1	2	junction_13	2.82986983186614	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGCACACCTGAATTCC	NA	False	NA	NA	False	NA	NA	NA	72687006	72780475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72721403_72721521_72722368_72722548_72728008_72728108_72734081_72734174_72735164_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749156_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429_72757632_72758747_72758897_72760512_72760754_72763429_72763510_72764689_72764784_72765723_72766187_72767381_72767547_72771396_72771517_72772041_72772204_72775167_72775298_72777459_72777599_72778968_72779135_72779822
tx.25701	chr11	+	185	1	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAGGCAAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	74648441	74648626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_74648400_74648600
tx.25702	chr11	+	3050	10	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	12	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	47.1333804808816	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	74816660	75055266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_74816830_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
tx.25704	chr11	-	196	1	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTAGTTTATGTGTAT	1943	False	NA	NA	False	NA	NA	NA	76526173	76525977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_76526000_76526200
tx.25705	chr11	-	3949	14	NIC	ENSMUSG00000037907.17	novel	3336	16	NA	NA	-356	0	intron_retention	FALSE	canonical	1	1	junction_8	1.51129866956835	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATTTCTACTTAACTT	5448	False	NA	NA	False	NA	NA	NA	77380860	77361312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_77363205_77363274_77363439_77363550_77363704_77363836_77363995_77364106_77364238_77364405_77364471_77365348_77365431_77367008_77367076_77367152_77367343_77367427_77367572_77368116_77368163_77368245_77368371_77368468_77368605_77380264
tx.25706	chr11	-	4700	4	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	77	8	77	-8	intron_retention	FALSE	canonical	3	152	junction_1	16.0831174424198	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	77404119	77398932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423
tx.25707	chr11	-	1590	5	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	77	-8	intron_retention	FALSE	canonical	3	26	junction_4	70.8391664264904	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	77404119	77398932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403723_77403985
tx.25708	chr11	-	7719	17	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	6699	3768	6699	-3768	3prime_fragment	FALSE	canonical	3	40	junction_10	8.02121211226832	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGAGAACTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	77469633	77423755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551
tx.25709	chr11	-	167	2	Antisense	novelGene_ENSMUSG00000037750.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78033781	78028085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_78028109_78033637
tx.2571	chr11	-	1823	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	126	0	-20	0	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	40583475	40570140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
tx.25710	chr11	+	3391	3	FSM	ENSMUSG00000019437.18	ENSMUST00000108338.2	714	3	-43	-2634	-12	600	multi-exon	FALSE	canonical	3	157	junction_1	5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	78069544	78073335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78069883_78070195_78070279_78070365
tx.25711	chr11	+	1359	3	FSM	ENSMUSG00000044122.16	ENSMUST00000060539.13	960	3	-148	-251	-148	-45	multi-exon	FALSE	canonical	3	12	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACTACGAAATGCTACC	NA	False	NA	NA	False	NA	NA	NA	78085381	78096544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78085781_78092637_78092719_78095665
tx.25712	chr11	-	5644	19	NIC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-114	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	11.422443793787	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGAGACTCCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	79037347	78904267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
tx.25713	chr11	+	12153	58	NIC	ENSMUSG00000020716.17	novel	11917	58	NA	NA	-84	17	combination_of_known_junctions	TRUE	canonical	1	2	junction_23	4.34117480727217	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGCAGCCAACTGTTT	NA	False	NA	NA	False	NA	NA	NA	79230434	79472455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403_79319518_79325670_79325751_79327515_79327640_79329512_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79349596_79349733_79354058_79354122_79359542_79359702_79360598_79360697_79362260_79362408_79364154_79364302_79366598_79366710_79426428_79426862_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456243_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79461056_79461274_79469079
tx.25714	chr11	+	7180	15	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-94	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	45.8902861981372	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAACTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	79481943	79588848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
tx.25715	chr11	+	1070	3	NIC	ENSMUSG00000017692.9	novel	3736	9	NA	NA	-59	-308	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.5	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTCAGGTTCTCTTGGA	7766	False	NA	NA	False	NA	NA	NA	80191678	80214676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_80192098_80210383_80210543_80214184
tx.25716	chr11	-	5366	22	FSM	ENSMUSG00000035441.15	ENSMUST00000041065.14	5354	22	-13	1	-13	-1	multi-exon	FALSE	canonical	1	2	junction_3	2.91683672973592	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAAGGTGTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	80670864	80372952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_80375209_80448259_80448415_80477672_80477787_80483612_80483718_80484564_80484710_80492408_80492633_80528699_80528908_80531044_80531212_80548218_80548352_80553866_80553942_80557400_80557472_80561674_80561846_80565439_80565555_80565642_80565789_80566876_80567081_80567647_80567765_80570845_80570942_80573207_80573262_80575150_80575317_80576675_80576770_80583706_80583916_80670523
tx.25717	chr11	+	1204	2	ISM	ENSMUSG00000087107.9	ENSMUST00000143673.2	1428	4	898	25	325	-25	3prime_fragment	FALSE	canonical	3	15	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGAGCCTTGCTCCTA	NA	False	NA	NA	False	NA	NA	NA	83115299	83117405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_83115458_83116359
tx.25719	chr11	+	2622	7	FSM	ENSMUSG00000000093.7	ENSMUST00000000095.7	3626	7	204	800	204	-800	multi-exon	FALSE	canonical	1	1	junction_1	1.10554159678513	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTCGCGTGGCAGGT	9797	False	NA	NA	False	NA	NA	NA	85723580	85731974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_85724328_85725445_85725714_85726620_85726768_85727878_85727956_85728051_85728216_85728669_85729308_85731393
tx.2572	chr11	-	1800	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	253	0	37	0	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	40585777	40570140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
tx.25720	chr11	-	4869	7	ISM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	65778	-2	65749	2	3prime_fragment	FALSE	canonical	3	63	junction_1	8.85061203156784	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCCGATGACTTAT	NA	False	NA	NA	False	NA	NA	NA	86026241	85948961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084
tx.25721	chr11	-	6026	11	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	70776	1	-7834	-1	3prime_fragment	FALSE	canonical	3	49	junction_2	10.555093557141	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTGTCTCATTCTG	NA	False	NA	NA	False	NA	NA	NA	86177652	86157859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259
tx.25722	chr11	-	5358	9	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	73713	3	-4897	-3	3prime_fragment	FALSE	canonical	3	49	junction_2	10.6770782520313	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGGTGTCTCATTC	NA	False	NA	NA	False	NA	NA	NA	86174715	86157861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576
tx.25723	chr11	-	8142	22	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	37695	920	12276	-920	3prime_fragment	FALSE	canonical	3	33	junction_16	14.3888341693424	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACCTTCTGAGGTCATT	NA	False	NA	NA	False	NA	NA	NA	86210733	86158778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173
tx.25724	chr11	+	3260	3	NNC	ENSMUSG00000072582.10	novel	3132	3	NA	NA	-132	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACGTTTGGTGTCTGATT	NA	False	NA	NA	False	NA	NA	NA	86574678	86583280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_86574950_86578861_86578955_86580384
tx.25725	chr11	+	5304	20	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-90	-25040	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	27.755262035101	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGAGAGTCGCCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	87295800	87420743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87418874
tx.25726	chr11	+	4177	6	FSM	ENSMUSG00000070345.4	ENSMUST00000093956.4	4158	6	-22	3	-22	-3	multi-exon	FALSE	canonical	0	0	junction_1	4.19523539268061	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTTGTCTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	87507967	87550365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87508732_87513570_87513946_87522417_87522516_87526436_87526959_87528895_87529071_87548122
tx.25727	chr11	+	2387	3	ISM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	3338	1	3337	-1	3prime_fragment	FALSE	canonical	3	512	junction_1	9	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAGGGTACTGAGGCC	NA	False	NA	NA	False	NA	NA	NA	87631715	87634442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_87633678_87633883_87633938_87634071
tx.25728	chr11	-	6635	9	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-13	-388	intron_retention	FALSE	canonical	3	11	junction_3	21.8746428542274	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTGGGAGTGTTAA	3819	False	NA	NA	False	NA	NA	NA	88951587	88928795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88943373_88946183_88946344_88950756
tx.25729	chr11	+	7363	29	NNC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	15.9093012840583	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTGTGAAGTCTAGT	603	False	NA	NA	False	NA	NA	NA	93886855	94016906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988551_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
tx.2573	chr11	-	3904	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	-11	-1	-11	1	multi-exon	TRUE	canonical	3	534	junction_10	59.4855104336938	750	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCCAATCAGTGATTAAT	NA	False	NA	NA	False	NA	NA	NA	40624260	40592220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
tx.25730	chr11	+	7441	30	NIC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_26	18.5369765764142	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGAAGTCTAGTGTG	612	False	NA	NA	False	NA	NA	NA	93886864	94016909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004088_94004128_94004998_94005176_94007555_94007706_94013547
tx.25731	chr11	-	1976	3	Antisense	novelGene_ENSMUSG00000086003.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGTCAGGTATGCGTG	7859	False	NA	NA	False	NA	NA	NA	94029809	94019728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_94021142_94022451_94022544_94029338
tx.25732	chr11	-	3631	4	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-270	2711	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.2400547137693	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCAGTTTCCCACAATA	665	False	NA	NA	False	NA	NA	NA	94242282	94231409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242205
tx.25733	chr11	+	2468	5	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	13783	17	4639	-17	3prime_fragment	FALSE	canonical	2	4	junction_1	14.6180539060437	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGAAATGACCCAATGC	NA	False	NA	NA	False	NA	NA	NA	94840832	94843851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
tx.25734	chr11	+	1830	2	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	14858	2	5714	-2	3prime_fragment	FALSE	canonical	3	39	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATGTGCAGTGGCCTC	NA	False	NA	NA	False	NA	NA	NA	94841907	94843866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_94842170_94842298
tx.25735	chr11	+	1906	3	FSM	ENSMUSG00000050860.7	ENSMUST00000054173.4	1910	3	3	1	3	-1	multi-exon	FALSE	canonical	3	8	junction_2	13	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGGACTTGTTCTCTT	2201	False	NA	NA	False	NA	NA	NA	95715328	95722965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95715536_95719491_95719602_95721376
tx.25736	chr11	+	173	2	Antisense	novelGene_ENSMUSG00000064795.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95946219	96007907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_95946367_96007881
tx.25737	chr11	+	253	2	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAACAAAACAAAACAA	5886	False	NA	NA	False	NA	NA	NA	96013218	96035386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_96013416_96035330
tx.25738	chr11	+	5652	12	NNC	ENSMUSG00000038756.14	novel	3485	14	NA	NA	-9028	-7625	intron_retention	FALSE	canonical	1	3	junction_1	2.53243423221529	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGTTTAAAAATATAAATAA	8251	False	NA	NA	False	NA	NA	NA	96015583	96048652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_96015697_96024568_96025735_96026310_96026430_96026550_96026682_96029552_96029710_96030455_96030600_96031257_96031344_96036223_96036450_96038230_96038407_96042708_96042898_96043889_96045681_96047298
tx.25739	chr11	+	5813	24	NNC	ENSMUSG00000049807.17	novel	5816	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_22	12.8358842463476	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCAGTGTCTCGCTTGT	NA	False	NA	NA	False	NA	NA	NA	97306360	97393224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_97306494_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383873_97383909_97390934
tx.2574	chr11	-	3562	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.1472239653	716	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCCAATCAGTGATTAAT	NA	False	NA	NA	False	NA	NA	NA	40624262	40592220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
tx.25740	chr11	-	5344	17	NNC	ENSMUSG00000038453.18	novel	5726	19	NA	NA	-10171	-29	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.93683503111768	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAGAAAA	2129	False	NA	NA	False	NA	NA	NA	97437942	97407518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_97409583_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97437710
tx.25741	chr11	+	5214	3	NIC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	2045	-20	intron_retention	FALSE	canonical	3	14	junction_2	2	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAATCCAAAGA	NA	False	NA	NA	False	NA	NA	NA	97568922	97576269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_97569882_97571295_97571653_97572371
tx.25742	chr11	+	4163	2	ISM	ENSMUSG00000038437.12	ENSMUST00000107586.3	7206	20	16990	20	4510	-20	3prime_fragment	FALSE	canonical	3	14	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAATCCAAAGA	NA	False	NA	NA	False	NA	NA	NA	97571387	97576269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_97571653_97572371
tx.25743	chr11	-	3594	9	NIC	ENSMUSG00000018541.11	novel	3105	10	NA	NA	4	2	intron_retention	FALSE	canonical	3	107	junction_1	12.11339650965	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTAGAGCGATCTACCA	7439	False	NA	NA	False	NA	NA	NA	97657378	97636438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
tx.25744	chr11	-	1289	6	FSM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	278	4	26	-4	multi-exon	FALSE	canonical	1	2	junction_2	2.57681974534503	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGCCTCACTTCTTATT	NA	False	NA	NA	False	NA	NA	NA	97886729	97880407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163_97885312_97885892_97885954_97886643
tx.25745	chr11	-	1351	4	ISM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	1484	7	1232	-7	3prime_fragment	FALSE	canonical	1	2	junction_2	1.4142135623731	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAACGCCTCACTTCTT	NA	False	NA	NA	False	NA	NA	NA	97885523	97880410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163
tx.25746	chr11	-	3376	13	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-7	-7	combination_of_known_junctions	TRUE	canonical	2	14	junction_1	28.323895486948	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	97913467	97892340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
tx.25747	chr11	+	6320	13	FSM	ENSMUSG00000003119.15	ENSMUST00000003203.14	4837	13	-539	-944	-284	944	multi-exon	FALSE	canonical	3	57	junction_1	13.3111795119741	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACATTTATTTACCTC	NA	False	NA	NA	False	NA	NA	NA	98093600	98138474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042
tx.25748	chr11	+	6752	17	NIC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-268	971	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	38.1262294883719	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATGTAGTCTATTAAT	NA	False	NA	NA	False	NA	NA	NA	98093616	98170301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98154295_98154397_98155019_98155134_98158577_98158685_98168196
tx.25749	chr11	+	2369	10	NIC	ENSMUSG00000058756.14	novel	2452	10	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	11.7104996677826	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGCCTCCTCCAGG	6256	False	NA	NA	False	NA	NA	NA	98632602	98659832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98659099
tx.2575	chr11	+	1585	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	803	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	40624485	40630873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
tx.25750	chr11	+	5162	6	NIC	ENSMUSG00000052915.15	novel	4593	9	NA	NA	-167	-5	intron_retention	FALSE	canonical	3	41	junction_3	7.1386273190299	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAACTTTTGCCTCAT	292	False	NA	NA	False	NA	NA	NA	98690823	98698680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
tx.25751	chr11	-	2049	8	NNC	ENSMUSG00000006931.16	novel	2178	8	NA	NA	-60	-288	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	34.5117548740975	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTGACCTAGTTTCCA	NA	False	NA	NA	False	NA	NA	NA	100305722	100299569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303755_100304434_100304607_100304752_100304906_100305002
tx.25752	chr11	-	3823	3	NNC	ENSMUSG00000048732.6	novel	2393	2	NA	NA	-10	5491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTTGTACTGTGTGT	7684	False	NA	NA	False	NA	NA	NA	100363577	100347948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_100349543_100353613_100355272_100363006
tx.25753	chr11	+	3886	2	Fusion	ENSMUSG00000001751.10_ENSMUSG00000019301.6	novel	1339	6	NA	NA	-1876	-8	intron_retention	FALSE	canonical	3	24	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGTATCATGTGGAGGG	NA	False	NA	NA	False	NA	NA	NA	100967360	100971345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr11_+_100970661_100970759
tx.25754	chr11	-	3225	3	Antisense	novelGene_ENSMUSG00000035007.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCTGTCCA	4979	False	NA	NA	False	NA	NA	NA	101333046	101323502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_101326387_101328006_101328224_101332922
tx.25755	chr11	-	2149	11	ISM	ENSMUSG00000017724.15	ENSMUST00000017868.7	2395	13	922	-3	42	-2	3prime_fragment	TRUE	canonical	2	11	junction_8	4.15210789840534	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTTGCTCTTTGCTTCC	205	False	NA	NA	False	NA	NA	NA	101675275	101660569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055
tx.25756	chr11	-	2126	11	NNC	ENSMUSG00000017724.15	novel	2395	13	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	5.98331012066064	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTATTTGCTCTTTGC	209	False	NA	NA	False	NA	NA	NA	101675271	101660573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662721_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055
tx.25757	chr11	-	1300	6	FSM	ENSMUSG00000052373.15	ENSMUST00000147838.8	2834	6	-10	1544	-7	788	multi-exon	FALSE	canonical	2	3	junction_1	2.19089023002066	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGATGGTTGTGAGCCAC	NA	False	NA	NA	False	NA	NA	NA	101917770	101913471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101914291_101914527_101914609_101915902_101915981_101916206_101916326_101916557_101916683_101917692
tx.25758	chr11	-	1162	2	ISM	ENSMUSG00000078640.10	ENSMUST00000107081.8	818	3	-47	-3	-47	3	intron_retention	FALSE	canonical	3	16	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCTTTTTTTTTTTT	8191	False	NA	NA	False	NA	NA	NA	102470334	102467220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_102467624_102469575
tx.25759	chr11	+	3392	8	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	107	junction_5	16.0165730493417	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	NA	False	NA	NA	NA	102992520	103003026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
tx.2576	chr11	+	1518	4	FSM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	-295	-496	-16	0	multi-exon	FALSE	canonical	3	70	junction_2	523.696052644619	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	40624477	40630873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_40624982_40626844_40626894_40627394_40627472_40629985
tx.25760	chr11	+	3968	26	FSM	ENSMUSG00000055805.16	ENSMUST00000042286.12	3806	26	-164	2	-164	-2	multi-exon	FALSE	canonical	0	0	junction_6	9.20208671986958	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCGTCGGCTCGGTGC	4884	False	NA	NA	False	NA	NA	NA	103061768	103089725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
tx.25761	chr11	+	3184	5	FSM	ENSMUSG00000000125.6	ENSMUST00000000127.6	3076	5	-46	-62	-46	62	multi-exon	FALSE	canonical	0	0	junction_1	1.4790199457749	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGGACACATTGTACG	NA	False	NA	NA	False	NA	NA	NA	103664929	103708845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_103665175_103698975_103699218_103702153_103702420_103703106_103703595_103706902
tx.25762	chr11	-	1912	2	Antisense	novelGene_ENSMUSG00000018411.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	104180071	104177045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_104178875_104179988
tx.25763	chr11	+	3021	9	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4939	1684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	228.007092817307	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAGGACGCAT	NA	False	NA	NA	False	NA	NA	NA	104178145	104220945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.25766	chr11	+	4903	25	FSM	ENSMUSG00000020681.15	ENSMUST00000001963.14	4906	25	8	-5	8	5	multi-exon	FALSE	canonical	0	0	junction_3	2.26691175145591	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTCAGACTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	105858778	105880795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_105859072_105859732_105859901_105860526_105860621_105861378_105861523_105862117_105862310_105862842_105862941_105863186_105863360_105863686_105863911_105864217_105864363_105864604_105864704_105864929_105865053_105865492_105865705_105866361_105866499_105867370_105867530_105867777_105867866_105869995_105870140_105870306_105870499_105872323_105872422_105872593_105872767_105875870_105876095_105876398_105876544_105876815_105876915_105878841_105878965_105879254_105879443_105879627
tx.25767	chr11	-	1920	11	FSM	ENSMUSG00000020715.10	ENSMUST00000106801.8	1957	11	8	29	8	-29	multi-exon	FALSE	canonical	3	10	junction_8	5.58927544499285	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTAGAGAATACAATTAAT	9457	False	NA	NA	False	NA	NA	NA	106378654	106304620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
tx.25768	chr11	+	2608	19	FSM	ENSMUSG00000018372.14	ENSMUST00000103068.10	2597	19	-11	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_9	19.4787792098523	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTTTGAATTTATAAC	5085	False	NA	NA	False	NA	NA	NA	106680066	106709686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
tx.25769	chr11	-	6409	18	ISM	ENSMUSG00000040481.18	ENSMUST00000057892.15	11488	28	57129	1851	-7588	465	3prime_fragment	FALSE	canonical	3	17	junction_7	16.2621261649529	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTTTGAATGTGCGC	7513	False	NA	NA	False	NA	NA	NA	106965619	106925757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
tx.2577	chr11	+	3874	2	FSM	ENSMUSG00000020328.11	ENSMUST00000144601.2	445	2	-2647	-782	-8	0	multi-exon	FALSE	canonical	3	1147	junction_1	0	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	40624485	40630873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_40627472_40629985
tx.25770	chr11	-	7387	19	NIC	ENSMUSG00000041592.17	novel	11287	45	NA	NA	-7131	-11	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	2.33861835331658	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCTGAAGCGGCAGTC	NA	False	NA	NA	False	NA	NA	NA	113724176	113667210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_113671970_113682200_113682328_113684125_113684265_113684548_113684690_113685748_113685914_113690968_113691095_113693950_113694113_113697092_113697231_113701154_113701342_113712173_113712290_113712401_113712504_113715840_113715977_113717267_113717339_113717852_113717957_113719183_113719386_113720723_113720919_113721605_113721705_113723079_113723270_113723948
tx.25771	chr11	+	2914	13	FSM	ENSMUSG00000034706.17	ENSMUST00000069325.14	2874	13	-42	2	-38	-2	multi-exon	FALSE	canonical	1	1	junction_1	2.40947204913349	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACTTGTCATGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	114618195	114648713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_114618602_114623718_114623922_114625353_114625516_114626690_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611_114642748_114643682_114643830_114645060_114645289_114647947
tx.25772	chr11	+	6931	2	FSM	ENSMUSG00000018858.16	ENSMUST00000134386.2	513	2	-6407	-11	1	0	multi-exon	FALSE	canonical	3	1124	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	115294578	115301745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115301228_115301463
tx.25773	chr11	-	222	2	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTAACTCTGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	115431544	115400087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_115400252_115431486
tx.25774	chr11	+	2150	9	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	180	junction_8	21.3819433167334	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5946	False	NA	NA	False	NA	NA	NA	115705563	115713915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
tx.25775	chr11	+	5791	39	NIC	ENSMUSG00000020758.16	novel	5919	40	NA	NA	-34	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_9	6.09118158281234	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTCTGTCCGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	115865770	115899238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_115865981_115868611_115868704_115869901_115869985_115870186_115870289_115870439_115870645_115871500_115871598_115871766_115871939_115873526_115873791_115874084_115874175_115874468_115874592_115874862_115875028_115875847_115875925_115877442_115877646_115879285_115879390_115879482_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
tx.25776	chr11	-	3298	5	NIC	ENSMUSG00000054517.10	novel	3048	6	NA	NA	9	-3	intron_retention	FALSE	canonical	1	1	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATTAAGCATCTCTTT	8160	False	NA	NA	False	NA	NA	NA	116021941	116015536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116017467_116017987_116018054_116018263_116018442_116018523_116019118_116021411
tx.25777	chr11	+	2437	11	Fusion	ENSMUSG00000020778.13_ENSMUSG00000092300.8	novel	915	7	NA	NA	10	0	multi-exon	FALSE	canonical	1	3	junction_4	51.6488141199776	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTGTCAATCTTCG	9077	False	NA	NA	False	NA	NA	NA	116089690	116111113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664_116106254_116106818_116106945_116107236_116107315_116107385_116107507_116107596_116107768_116107857_116107960_116108919_116109124_116110479
tx.25778	chr11	+	3774	4	NNC	ENSMUSG00000020778.13	novel	902	4	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	58.4541605780879	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTGTGTGTGCTGATG	9079	False	NA	NA	False	NA	NA	NA	116089692	116106141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_116089810_116095670_116095806_116096436_116096595_116102777
tx.25779	chr11	+	2563	2	ISM	ENSMUSG00000020812.19	ENSMUST00000153405.3	1151	5	360	-5	-12	0	intron_retention	FALSE	canonical	3	180	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	116562862	116566624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_116563565_116564763
tx.2578	chr11	+	1676	4	FSM	ENSMUSG00000020328.11	ENSMUST00000141839.2	577	4	-536	-563	2	0	multi-exon	FALSE	canonical	3	90	junction_1	492.487788906712	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	40624495	40630873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_40625083_40626844_40626894_40627319_40627472_40629985
tx.25780	chr11	+	2656	16	FSM	ENSMUSG00000050106.19	ENSMUST00000050874.14	2577	16	3	-82	3	0	multi-exon	FALSE	canonical	2	3	junction_4	5.46504040851179	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGGAAATACTTGAAT	7617	False	NA	NA	False	NA	NA	NA	117673125	117683936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117673235_117673875_117674097_117674220_117674370_117674596_117674747_117674938_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681607_117681733_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
tx.25781	chr11	+	3215	2	Antisense	novelGene_ENSMUSG00000025576.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGTCTCAACTGTTAA	8943	False	NA	NA	False	NA	NA	NA	118442787	118446741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_118443246_118443984
tx.25782	chr11	-	2441	3	ISM	ENSMUSG00000039976.5	ENSMUST00000207655.2	2855	12	-49	60144	-11	3362	5prime_fragment	FALSE	canonical	2	4	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCGGAGAGTATGTGACT	NA	False	NA	NA	False	NA	NA	NA	119119336	119098104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_119100195_119101330_119101567_119119221
tx.25783	chr11	-	7315	3	ISM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	1	2	1	-2	intron_retention	FALSE	canonical	3	67	junction_1	2	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTCATTGGATTC	NA	False	NA	NA	False	NA	NA	NA	119438578	119429546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_119433521_119434007_119434188_119435417
tx.25784	chr11	-	1892	3	FSM	ENSMUSG00000075389.4	ENSMUST00000145437.2	646	3	-187	-1059	-187	1059	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTGCCGTGAGATAG	5956	False	NA	NA	False	NA	NA	NA	120080865	120077473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120078578_120079314_120079503_120080265
tx.25785	chr11	+	10747	28	NNC	ENSMUSG00000039741.16	novel	10712	28	NA	NA	-33	-1	intron_retention	TRUE	canonical	0	0	junction_16	9.64101890579197	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCAGTGGTCCGGATTGT	NA	False	NA	NA	False	NA	NA	NA	120123739	120183107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_120123934_120127685_120128084_120149897_120150078_120159132_120159256_120162184_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169877_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
tx.25786	chr11	+	5094	11	ISM	ENSMUSG00000039741.16	ENSMUST00000118987.2	10712	27	47641	-1	-5453	1	3prime_fragment	FALSE	canonical	3	17	junction_4	5.82151183113115	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGGTCCGGATTGTGA	NA	False	NA	NA	False	NA	NA	NA	120175165	120183109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
tx.25787	chr11	+	565	2	FSM	ENSMUSG00000043644.5	ENSMUST00000143813.2	619	2	54	0	54	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAGCTCAACGTCTAAA	3049	False	NA	NA	False	NA	NA	NA	120239557	120242016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120239689_120241582
tx.25788	chr11	-	4314	9	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	11	0	intron_retention	FALSE	canonical	1	16	junction_4	21.0237960416286	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	120269579	120260387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120268488_120269153_120269273_120269367
tx.25789	chr11	-	1613	3	FSM	ENSMUSG00000057594.13	ENSMUST00000154136.8	760	3	18	-871	2	-17	multi-exon	FALSE	canonical	3	167	junction_2	6	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	120358289	120355708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120356926_120357479_120357594_120358007
tx.2579	chr11	-	3470	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	42	0	42	0	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	982	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	40646096	40639378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
tx.25790	chr11	-	5971	3	ISM	ENSMUSG00000061111.9	ENSMUST00000135515.2	1256	4	13	0	13	0	intron_retention	FALSE	canonical	3	389	junction_1	11.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCATGGCAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	120440514	120433713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_120434575_120434729_120434832_120435506
tx.25792	chr11	-	537	2	NNC	ENSMUSG00000048445.7	novel	3403	19	NA	NA	20976	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGTCTTGTCCTACT	4480	False	NA	NA	False	NA	NA	NA	120743521	120717354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_120717751_120743380
tx.25793	chr11	-	5193	6	ISM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	40107	11	40107	-11	intron_retention	FALSE	canonical	3	70	junction_2	9.3936148526539	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGCACAATCTTGACTA	NA	False	NA	NA	False	NA	NA	NA	121523872	121507033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698
tx.25794	chr11	+	511	3	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	3	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTTTCCGTGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	121816463	121826069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_121816553_121824785_121824872_121825733
tx.25795	chr12	+	2454	6	NIC	ENSMUSG00000079179.10	novel	823	8	NA	NA	-3	1713	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	72.3143139357624	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGACTGTTTCATTCAA	NA	False	NA	NA	False	NA	NA	NA	3285500	3293123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063_3288113_3288833_3289010_3291521
tx.25796	chr12	+	3815	4	NNC	ENSMUSG00000079179.10	novel	4006	4	NA	NA	-7	-109	intron_retention	FALSE	canonical	2	11	junction_1	82.6357469057228	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGTGTTCACATGTA	NA	False	NA	NA	False	NA	NA	NA	3285518	3291301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_3285863_3287284_3287413_3287590_3287661_3288028
tx.25797	chr12	-	5302	3	ISM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	17517	-1907	-231	1907	3prime_fragment	FALSE	canonical	3	73	junction_2	7.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGCCACGGTGT	8059	False	NA	NA	False	NA	NA	NA	4266777	4259759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_4264631_4265258_4265431_4266518
tx.258	chr1	-	7106	8	ISM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	29366	1176	-3384	0	3prime_fragment	FALSE	canonical	3	177	junction_1	21.4037952003749	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	52243025	52224438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013
tx.2580	chr11	-	3667	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	42	-4	combination_of_known_junctions	FALSE	canonical	3	618	junction_2	50.9043220168975	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACCTTCCTTGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	40646096	40639382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
tx.25800	chr12	-	4973	13	ISM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	-21	41829	-21	6551	5prime_fragment	FALSE	canonical	3	76	junction_12	14.6846480682681	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTAGGATCCTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	4527203	4339190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
tx.25802	chr12	+	2709	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	28	0	1	0	multi-exon	TRUE	canonical	3	35	junction_1	76.8839312788367	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	NA	False	NA	NA	NA	8258134	8335759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
tx.25803	chr12	+	5842	20	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	4	-32	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	43.7931425588534	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCTGGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	8724227	8802525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_8724289_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
tx.25804	chr12	+	5160	2	ISM	ENSMUSG00000020576.11	ENSMUST00000221714.2	1768	9	74390	-1	56634	1	3prime_fragment	FALSE	canonical	3	73	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGATGCCCTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	13611512	13633805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_13616259_13633391
tx.25805	chr12	-	3852	2	NIC	ENSMUSG00000036523.17	novel	8058	35	NA	NA	-34	-20384	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	16850921	16803662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_16807241_16850647
tx.25806	chr12	+	5039	7	NIC	ENSMUSG00000057469.9	novel	2362	8	NA	NA	-12	-2	intron_retention	FALSE	canonical	2	143	junction_1	51.562260100452	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTGCGTGCCTGTGTT	7384	False	NA	NA	False	NA	NA	NA	16860951	16876751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
tx.25807	chr12	-	601	3	NNC	ENSMUSG00000114024.2	novel	279	3	NA	NA	-25	431	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCAGGCTCGAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	17398399	17393970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_17394304_17394398_17394550_17398282
tx.25808	chr12	+	2749	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10199	-516	intron_retention	FALSE	canonical	3	17	junction_3	60.3342541366198	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACATACTGGAGA	NA	False	NA	NA	False	NA	NA	NA	17942190	17954160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17951718
tx.25809	chr12	+	3849	6	Fusion	ENSMUSG00000116815.2_ENSMUSG00000073197.10	novel	2431	4	NA	NA	-61	1701	multi-exon	TRUE	non_canonical	0	0	junction_1	0.4	5	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGTATTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	18564449	18701700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_18564865_18696480_18696608_18696807_18696869_18698202_18698706_18698789_18699174_18699341
tx.2581	chr11	-	680	5	FSM	ENSMUSG00000020415.17	ENSMUST00000121638.8	948	5	281	-13	281	3	multi-exon	FALSE	canonical	3	8449	junction_1	727.283129186976	1967	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	NA	False	NA	NA	NA	43316509	43311087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409
tx.25810	chr12	-	1833	2	FSM	ENSMUSG00000085642.9	ENSMUST00000143905.2	881	2	-256	-696	-47	-91	multi-exon	FALSE	canonical	1	3	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTAAAGTACTTATATAC	NA	False	NA	NA	False	NA	NA	NA	20971310	20925731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_20927097_20970842
tx.25811	chr12	-	3798	6	FSM	ENSMUSG00000020641.17	ENSMUST00000020970.10	3782	6	-18	2	-18	-2	multi-exon	FALSE	canonical	0	0	junction_5	1.01980390271856	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTGTTAGTATCTCT	NA	False	NA	NA	False	NA	NA	NA	26506469	26492746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_26495570_26497150_26497184_26498581_26498732_26500544_26500775_26504016_26504179_26506069
tx.25812	chr12	+	6577	22	NIC	ENSMUSG00000020674.18	novel	6614	23	NA	NA	-43	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	5.96246764420263	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGAGAATCTGTCCTT	5844	False	NA	NA	False	NA	NA	NA	29987991	30067649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_29988324_30023991_30024064_30025489_30025562_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
tx.25813	chr12	+	3407	14	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	8	95957	8	-84349	5prime_fragment	FALSE	canonical	3	60	junction_7	24.9425375115443	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTGTAACAAATCCTT	NA	False	NA	NA	False	NA	NA	NA	31704875	31891672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753
tx.25814	chr12	+	3367	5	FSM	ENSMUSG00000043153.7	ENSMUST00000220519.2	3122	5	322	-567	119	567	multi-exon	FALSE	canonical	3	12	junction_1	4.38035386698381	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAATCTGTCAGTATGAA	NA	False	NA	NA	False	NA	NA	NA	36431874	36529384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698
tx.25815	chr12	+	1994	2	Antisense	novelGene_ENSMUSG00000113520.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTTCCTGGTGTCTCA	2	True	NA	NA	False	NA	NA	NA	38780112	38793100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr12_+_38780406_38791399
tx.25816	chr12	+	1891	2	NNC	ENSMUSG00000036257.16	novel	2728	13	NA	NA	-16	-59431	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGTTGTACATTCAT	NA	False	NA	NA	False	NA	NA	NA	44268136	44270242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_44268244_44268458
tx.25817	chr12	-	4449	6	NNC	ENSMUSG00000021047.8	novel	7154	5	NA	NA	-575	3176	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	6.37495098020369	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTTGTCTCCCGTCTCA	NA	False	NA	NA	False	NA	NA	NA	46866287	46744681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_46747757_46760280_46760353_46767472_46767640_46813072_46813175_46863668_46863813_46865398
tx.25818	chr12	+	2586	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	-125	-5	-109	5	multi-exon	TRUE	canonical	0	0	junction_1	2.34608870919344	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTAACACTAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	51640014	51652549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
tx.25819	chr12	-	5233	13	FSM	ENSMUSG00000035181.7	ENSMUST00000218254.2	4111	13	-11	-1111	-11	1111	multi-exon	FALSE	canonical	1	15	junction_12	12.4328753266848	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAGGTACTGTACTTTT	NA	False	NA	NA	False	NA	NA	NA	52018091	51981770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
tx.2582	chr11	+	2696	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-20	949	-5	-949	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTGGATTTTCGTACA	NA	False	NA	NA	False	NA	NA	NA	43324565	43337859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
tx.25820	chr12	-	3715	4	NIC	ENSMUSG00000062198.6	novel	4110	5	NA	NA	1	-2494	intron_retention	FALSE	canonical	3	175	junction_2	23.4236347876812	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55126888	55103032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_55106364_55107839_55107979_55109772_55109895_55126765
tx.25821	chr12	-	176	2	Antisense	novelGene_ENSMUSG00000045440.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	55663959	55609801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr12_-_55609928_55663909
tx.25822	chr12	+	762	3	FSM	ENSMUSG00000034883.10	ENSMUST00000222520.2	767	3	9	-4	9	0	multi-exon	FALSE	canonical	3	25	junction_2	59	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATGTCTCAGCAGTTA	NA	False	NA	NA	False	NA	NA	NA	69215603	69225783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_69215837_69218635_69218735_69225353
tx.25823	chr12	+	1364	4	NIC	ENSMUSG00000054894.7	novel	1485	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	90.3487071788462	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTAGTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	69771745	69791432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_69771789_69787672_69787882_69788418_69788591_69790492
tx.25824	chr12	-	4601	28	NIC	ENSMUSG00000021068.18	novel	4723	29	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_20	8.36807572611677	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	70158341	70065512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209
tx.25825	chr12	+	1907	5	FSM	ENSMUSG00000021076.7	ENSMUST00000222291.2	615	5	-37	-1255	-9	1255	multi-exon	FALSE	canonical	3	306	junction_4	20.5836707124847	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAAAAAAATATTTCTTT	9694	False	NA	NA	False	NA	NA	NA	70984679	70995741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225
tx.25826	chr12	-	168	2	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACCCTTTATTTGAAAAC	NA	False	NA	NA	False	NA	NA	NA	71039650	71003684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_-_71003834_71039631
tx.25827	chr12	+	3723	25	NIC	ENSMUSG00000021090.17	novel	2520	16	NA	NA	13	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_18	3.4990077958695	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGTGTCGAAATTATT	NA	False	NA	NA	False	NA	NA	NA	72489035	72544013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_72489245_72496093_72496175_72496421_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516996_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822
tx.25828	chr12	+	3035	17	NIC	ENSMUSG00000044712.16	novel	3032	16	NA	NA	16	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	4.37142711251143	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTATGCTGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	73333646	73400819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_73333807_73335166_73335298_73338933_73339008_73340472_73340574_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
tx.25829	chr12	+	4088	19	ISM	ENSMUSG00000063450.15	ENSMUST00000139204.8	5789	31	23434	-26	-4	0	3prime_fragment	FALSE	canonical	2	10	junction_3	5.31391139566588	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTTGTGTATTGGAC	7426	False	NA	NA	False	NA	NA	NA	76118785	76157700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
tx.2583	chr11	+	2775	17	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	-2	-946	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	NA	False	NA	NA	NA	43324568	43337862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
tx.25830	chr12	+	4171	3	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	-27	71151	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	2	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTCTCATTTCCATTG	NA	False	NA	NA	False	NA	NA	NA	77600093	77687634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_77600570_77616271_77616542_77684209
tx.25831	chr12	+	3233	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	-19	71146	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	2.16024689946929	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCCCAAGTCTCATTTC	NA	False	NA	NA	False	NA	NA	NA	77600101	77687629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_77600570_77616271_77616542_77684209_77684294_77685218
tx.25832	chr12	+	2655	19	ISM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	55	19537	55	-18863	5prime_fragment	FALSE	canonical	3	35	junction_9	14.8183444869302	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCCCTGAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	78273481	78712004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264
tx.25833	chr12	-	1130	3	FSM	ENSMUSG00000112880.2	ENSMUST00000219062.2	1118	3	11	-23	11	23	multi-exon	FALSE	canonical	2	4	junction_2	3	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGAGAGAAAGGGTTTA	NA	False	NA	NA	False	NA	NA	NA	80992159	80989423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_80989717_80989815_80990004_80991510
tx.25834	chr12	-	5499	10	NIC	ENSMUSG00000042724.9	novel	4564	11	NA	NA	30	265	intron_retention	FALSE	canonical	3	49	junction_9	4.0490815907308	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGTTGGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	81827919	81767518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
tx.25835	chr12	+	7964	33	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-60	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	9.06395462463819	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTCTATGTGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	81906736	82043895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_81907299_81941756_81941966_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
tx.25836	chr12	+	5229	3	ISM	ENSMUSG00000021140.10	ENSMUST00000021567.6	12139	36	135093	23	-115	-23	3prime_fragment	FALSE	canonical	3	52	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTCATTTTGCC	NA	False	NA	NA	False	NA	NA	NA	82041896	82047675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_82042105_82042494_82042636_82042795
tx.25837	chr12	+	2992	3	NNC	ENSMUSG00000113052.2	novel	684	2	NA	NA	-2828	-2664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGAATTGTATGGTG	3333	False	NA	NA	False	NA	NA	NA	84239914	84243690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_84241969_84242424_84243187_84243514
tx.25838	chr12	+	3369	2	NNC	ENSMUSG00000071235.13	novel	516	2	NA	NA	373	-407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGTATCTTTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	84688165	84697822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_84688963_84695250
tx.25839	chr12	-	5931	3	ISM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-21	-1	1	1	intron_retention	FALSE	canonical	3	749	junction_1	35	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTGTGTACTTTGGCC	NA	False	NA	NA	False	NA	NA	NA	85871317	85862220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_85862968_85863089_85863209_85866252
tx.2584	chr11	+	4153	15	FSM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	-1536	949	-1536	-949	multi-exon	FALSE	canonical	3	210	junction_13	21.5180275630477	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTGGATTTTCGTACA	NA	False	NA	NA	False	NA	NA	NA	43326633	43337859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
tx.25840	chr12	+	3830	4	NNC	ENSMUSG00000097543.2	novel	3160	5	NA	NA	-8	43629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.68331255192114	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTCTCAGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	86216106	86285505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_86216220_86216782_86217055_86218765_86218861_86282155
tx.25841	chr12	-	4770	4	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	12.7279220613579	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTCAGTCTTCCCCAT	NA	False	NA	NA	False	NA	NA	NA	86516792	86501927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr12_-_86506056_86506775_86506857_86508048_86508306_86516488
tx.25842	chr12	-	4824	21	NNC	ENSMUSG00000034126.6	novel	5064	21	NA	NA	-144	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.1107702762748	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACATTGTTCTTGTG	5933	False	NA	NA	False	NA	NA	NA	87194392	87153641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_87156068_87156777_87156944_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
tx.25843	chr12	-	7162	7	NNC	ENSMUSG00000034111.7	novel	7409	6	NA	NA	154	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	7.38052994182818	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7899	False	NA	NA	False	NA	NA	NA	87247074	87213010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_87219406_87220821_87220880_87220972_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
tx.25844	chr12	-	743	4	NNC	ENSMUSG00000072919.5	novel	1101	6	NA	NA	8410	70	at_least_one_novel_splicesite	TRUE	canonical	3	41	junction_2	1.69967317119759	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGGTGTTTCTTAGA	NA	False	NA	NA	False	NA	NA	NA	87271920	87267958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_87268219_87269818_87270042_87270931_87271084_87271812
tx.25845	chr12	-	5830	5	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-85	3303	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.8834238750888	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTAGATTGATTAGCT	7584	False	NA	NA	False	NA	NA	NA	87346564	87322108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_87326977_87329419_87329561_87331799_87332161_87333668_87333912_87346347
tx.25846	chr12	-	3046	4	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-67	-862	intron_retention	FALSE	canonical	3	86	junction_2	4.49691252107735	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGTGTTTTGCCTGCA	7602	False	NA	NA	False	NA	NA	NA	87346546	87327317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_87329561_87331799_87332161_87333668_87333912_87346347
tx.25847	chr12	+	2736	2	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGGGAAAGTTAATTCT	NA	False	NA	NA	False	NA	NA	NA	87346614	87349444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_87347023_87347116
tx.25848	chr12	+	2233	6	Antisense	novelGene_ENSMUSG00000021036.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_5	5.93295878967653	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTTCCTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	87346655	87358092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr12_+_87347023_87347116_87347291_87347591_87347783_87352843_87352918_87353609_87353641_87356696
tx.25849	chr12	-	3688	2	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	19735	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTTATTCATTCA	NA	False	NA	NA	False	NA	NA	NA	87355652	87351831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_87353225_87353357
tx.2585	chr11	+	3368	6	FSM	ENSMUSG00000045877.3_ENSMUSG00000044707.8	ENSMUST00000050574.7	2672	6	-41	-655	-41	655	multi-exon	FALSE	canonical	3	6	junction_5	2.71293199325011	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCTGCTGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	43419569	43478479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_43419795_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
tx.25850	chr12	-	1846	2	Genic_Genomic	ENSMUSG00000113348.2	novel	431	1	NA	NA	-2529	920	multi-exon	FALSE	canonical	1	4	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATTAATGC	NA	False	NA	NA	False	NA	NA	NA	88109092	88105212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_-_88106869_88108902
tx.25851	chr12	-	4699	26	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_25	14.4877327418751	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATGATGCGTCTG	6130	False	NA	NA	False	NA	NA	NA	91351205	90965267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351135
tx.25852	chr12	+	2369	12	NNC	ENSMUSG00000021007.15	novel	1913	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.1372080942449	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCACATATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	98594408	98636071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_98594594_98598221_98598297_98603824_98603873_98612278_98612688_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
tx.25855	chr12	+	1132	3	ISM	ENSMUSG00000113679.2	ENSMUST00000223300.2	4791	4	13676	3515	0	0	3prime_fragment	FALSE	canonical	2	9	junction_1	0.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTCTGAGCTCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	100256543	100263652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_100256684_100261887_100261990_100262762
tx.25856	chr12	-	1231	8	NIC	ENSMUSG00000021180.10	novel	1039	8	NA	NA	15	22	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	9.9979589753844	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTTTCAAGATTACATA	NA	False	NA	NA	False	NA	NA	NA	100691364	100560620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_100560824_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
tx.25857	chr12	-	2969	3	FSM	ENSMUSG00000047415.13	ENSMUST00000110065.8	2900	3	-68	-1	-51	1	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGAGTGTGTGCAGTCC	NA	False	NA	NA	False	NA	NA	NA	100874508	100842942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_100845672_100854242_100854332_100874357
tx.25858	chr12	-	9742	21	NIC	ENSMUSG00000021188.15	novel	9873	21	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_20	5.42678542048605	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTCTTCGTCCACAA	7546	False	NA	NA	False	NA	NA	NA	101879401	101800304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872073_101878948
tx.2586	chr11	+	4602	5	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	-60	894	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	20.1416856295594	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATAAAGTCTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	43572764	43613212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_43573444_43574307_43575053_43577183_43577253_43595360_43596305_43611047
tx.25860	chr12	+	1028	7	FSM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	-50	-1	-2	1	multi-exon	FALSE	canonical	1	4	junction_4	6.23832242407097	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATTGTTCCCCTTTCT	6584	False	NA	NA	False	NA	NA	NA	103400467	103406499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659_103405822_103406212
tx.25861	chr12	+	4944	5	NIC	ENSMUSG00000079014.5	novel	2200	6	NA	NA	-14	3004	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	10.6624340560681	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGATCTACTCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	104229366	104238635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_104229474_104230560_104230695_104231352_104231972_104233914_104234066_104234702
tx.25862	chr12	-	4831	6	NNC	ENSMUSG00000021097.16	novel	3529	14	NA	NA	-1026	2745	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.4794034467057	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTGTTT	3914	False	NA	NA	False	NA	NA	NA	104748156	104734993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_104738223_104739436_104739534_104740031_104740103_104740747_104740809_104743203_104743401_104746980
tx.25863	chr12	-	3394	14	NNC	ENSMUSG00000021097.16	novel	3529	14	NA	NA	-53	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.3518994427135	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGCATCTTACTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	104831388	104737997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_104738223_104739436_104739534_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
tx.25864	chr12	-	3785	18	NNC	ENSMUSG00000054150.13	novel	3357	19	NA	NA	-781	106	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	1.12536038057112	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACAATGTCTCTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	104976849	104898180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_104898631_104905840_104905880_104906864_104907015_104909563_104909723_104911339_104911470_104912824_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429_104929592_104934140_104934451_104935459_104935633_104941996_104942155_104976249
tx.25867	chr12	+	2659	13	NNC	ENSMUSG00000021258.11	novel	2789	12	NA	NA	-50	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	23.5772960470214	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTATGTGTGAGTACAGC	NA	False	NA	NA	False	NA	NA	NA	108145787	108169617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_108145816_108145996_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
tx.25868	chr12	+	2250	15	FSM	ENSMUSG00000021259.6	ENSMUST00000021684.6	2118	15	-133	1	-133	-1	multi-exon	FALSE	canonical	1	1	junction_1	1.28769688409428	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGTACGGCCACCCAG	NA	False	NA	NA	False	NA	NA	NA	108300506	108328492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_108300824_108308581_108308663_108309272_108309355_108311832_108311907_108312347_108312435_108317440_108317580_108318172_108318284_108319032_108319184_108319348_108319412_108321682_108321756_108323745_108323831_108324289_108324401_108326739_108326829_108327454_108327522_108327772
tx.25869	chr12	+	2882	8	NNC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	2574	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.0039243506178	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	7469	False	NA	NA	False	NA	NA	NA	108862816	108994378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_108862986_108863370_108863469_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
tx.2587	chr11	+	4102	4	NNC	ENSMUSG00000044950.8	novel	2739	2	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	2.05480466765633	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	43572816	43598021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_43573444_43574307_43575053_43577183_43577253_43595360
tx.25870	chr12	-	2892	5	ISM	ENSMUSG00000040867.14	ENSMUST00000239108.2	2117	7	14462	-602	-2226	6	3prime_fragment	FALSE	canonical	2	2	junction_1	3.74165738677394	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTGCATTGTTTCT	9024	False	NA	NA	False	NA	NA	NA	109005239	108998106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_109000278_109001253_109001338_109002921_109003030_109003578_109003646_109004777
tx.25871	chr12	+	2524	5	NIC	ENSMUSG00000097391.9	novel	1300	8	NA	NA	2456	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_2	18.6010752377383	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTGCGTGTCTGTATT	877	False	NA	NA	False	NA	NA	NA	109706669	109715892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_109708250_109708495_109708725_109710099_109710282_109714558_109714728_109715528
tx.25872	chr12	-	653	2	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCGGGCCAAAATAACGTC	NA	False	NA	NA	False	NA	NA	NA	109913496	109912212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_-_109912630_109913260
tx.25873	chr12	-	2170	3	ISM	ENSMUSG00000113581.2	ENSMUST00000222401.2	1380	4	-553	-4	-553	1	intron_retention	FALSE	canonical	3	7	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTACAGTGTGGACTTAC	NA	False	NA	NA	False	NA	NA	NA	110245159	110241817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_110242012_110243059_110243861_110243984
tx.25874	chr12	+	177	2	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAGAAAAGAGAA	9410	False	NA	NA	False	NA	NA	NA	110638191	110646964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_110638337_110646932
tx.25875	chr12	-	7067	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	-2	3823	intron_retention	FALSE	canonical	3	36	junction_2	78.7303571426071	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACAATGTTTTAAGTCT	7658	False	NA	NA	False	NA	NA	NA	110807375	110770408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
tx.25876	chr12	-	4602	3	ISM	ENSMUSG00000021287.13	ENSMUST00000127281.8	2300	7	4213	0	1994	0	intron_retention	FALSE	canonical	3	69	junction_2	4	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACTTGCAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	111774422	111769625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_111771107_111771177_111771225_111771348
tx.25877	chr12	+	4785	35	NIC	ENSMUSG00000054003.14	novel	4809	36	NA	NA	-28	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	3.36170166170107	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTTTGCTCAGAGATG	NA	False	NA	NA	False	NA	NA	NA	111937964	112035290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960364_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111973945_111974011_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992109_111992208_111992273_111992344_111992409_111992686_111992732_111997621_111997739_111999112_111999221_112001015_112001117_112002787_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
tx.25879	chr12	+	6312	23	ISM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-84	8	-84	7	intron_retention	FALSE	canonical	3	64	junction_11	15.2543179092358	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGAATGTGTTGGGG	1295	False	NA	NA	False	NA	NA	NA	112978043	113038013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287
tx.2588	chr11	+	3753	3	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	5	924	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	21	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTTAAGAACTGTTT	NA	False	NA	NA	False	NA	NA	NA	43572829	43613242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_43573444_43595360_43596305_43611047
tx.25881	chr12	-	3395	23	NNC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	8.14993788953669	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGTGAACATTTTAGT	NA	False	NA	NA	False	NA	NA	NA	116226609	116171065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226206_116226309_116226470
tx.25882	chr12	+	173	2	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGATTACCAGGAAAGC	NA	False	NA	NA	False	NA	NA	NA	117486947	117515820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_117487094_117515793
tx.25883	chr13	+	2680	4	NIC	ENSMUSG00000097709.9	novel	2568	4	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	13.1993265821489	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTATGGACAAGGTTGT	NA	False	NA	NA	False	NA	NA	NA	3528210	3544398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_3528391_3529908_3530002_3535030_3535221_3542181
tx.25884	chr13	+	3615	5	NIC	ENSMUSG00000033781.8	novel	4453	6	NA	NA	12	1288	intron_retention	FALSE	canonical	3	52	junction_3	7.22841614740048	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCCCTGTGTCTTATT	NA	False	NA	NA	False	NA	NA	NA	3684043	3701774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_3684176_3692064_3693626_3694915_3695051_3699318_3699511_3700179
tx.25885	chr13	+	7016	33	ISM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	260287	0	-73991	0	3prime_fragment	FALSE	canonical	3	44	junction_4	6.30847644047277	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	NA	False	NA	NA	False	NA	NA	NA	9586850	9718964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
tx.25886	chr13	+	4882	7	ISM	ENSMUSG00000110123.2	ENSMUST00000209949.2	915	10	10724	-2635	10724	2635	3prime_fragment	FALSE	canonical	2	6	junction_1	22.1032928668005	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTGTTTCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	13508672	13527647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_13510228_13517810_13517904_13518036_13518284_13519905_13519976_13520480_13520568_13522598_13522733_13524951
tx.25887	chr13	-	5105	6	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-11	0	intron_retention	FALSE	canonical	2	6	junction_5	88.6282122125906	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	13568160	13533200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_13535658_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567662
tx.25888	chr13	+	9015	16	NNC	ENSMUSG00000021318.16	novel	8170	15	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.36234948378079	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTCTACTGGATTTC	NA	False	NA	NA	False	NA	NA	NA	15637808	15904607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_15638697_15639150_15639244_15652584_15652750_15722984_15723228_15788363_15788470_15815653_15815860_15818878_15819026_15823105_15823308_15834546_15834761_15835465_15835580_15836974_15837116_15888083_15888234_15889534_15889700_15894639_15894931_15898024_15898353_15899045
tx.25889	chr13	-	1383	3	FSM	ENSMUSG00000055137.8	ENSMUST00000220514.2	1351	3	-8	-24	-8	24	multi-exon	FALSE	canonical	3	10	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCTTTTGATGCTACT	NA	False	NA	NA	False	NA	NA	NA	17869362	17857270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_17858438_17859293_17859371_17869223
tx.2589	chr11	+	3276	2	FSM	ENSMUSG00000044950.8	ENSMUST00000061070.6	3277	2	4	-3	4	3	multi-exon	FALSE	canonical	3	104	junction_1	0	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	43572828	43598021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_43573444_43595360
tx.25890	chr13	-	2455	4	NIC	ENSMUSG00000075054.6	novel	8744	3	NA	NA	5	2192	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	225.274647190195	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCAAGACTTTGCTGTC	NA	False	NA	NA	False	NA	NA	NA	18167929	18161227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_18163191_18164161_18164368_18166212_18166335_18167765
tx.25891	chr13	+	1194	4	NNC	ENSMUSG00000076749.3	novel	924	3	NA	NA	-16224	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.69967317119759	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTATTTTTGTCAGTCT	NA	False	NA	NA	False	NA	NA	NA	19382048	19401195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_19382318_19398272_19398603_19400033_19400079_19400645
tx.25892	chr13	+	3936	5	FSM	ENSMUSG00000021319.8	ENSMUST00000222464.2	4049	5	-44	157	-44	8	multi-exon	FALSE	canonical	3	8	junction_1	1.80277563773199	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTCTGCAGAAATAT	NA	False	NA	NA	False	NA	NA	NA	19807229	19817007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235
tx.25893	chr13	-	3132	2	ISM	ENSMUSG00000053101.4	ENSMUST00000065335.3	3433	5	69052	0	69022	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTCTGGTCTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	19939375	19933851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_19936788_19939179
tx.25894	chr13	-	4908	2	NNC	ENSMUSG00000063894.16	novel	6954	3	NA	NA	7612	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGATTTTTTTGTAAT	NA	False	NA	NA	False	NA	NA	NA	21703580	21697390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_21698186_21699467
tx.25895	chr13	-	7372	6	NNC	ENSMUSG00000063894.16	novel	8805	6	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4422219857653	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGATTTTTTTGTAAT	6579	False	NA	NA	False	NA	NA	NA	21715262	21697390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_21698186_21699467_21705133_21706393_21706486_21709307_21709477_21710688_21711192_21715114
tx.25896	chr13	-	4847	4	ISM	ENSMUSG00000046351.12	ENSMUST00000145451.8	1261	5	994	-3929	4	0	3prime_fragment	FALSE	canonical	3	71	junction_1	26.0426999794995	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTCCACTATACTA	10007	False	NA	NA	False	NA	NA	NA	23552377	23537272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289
tx.25897	chr13	-	3915	8	FSM	ENSMUSG00000053216.16	ENSMUST00000110433.10	2370	8	0	-1545	0	1545	multi-exon	TRUE	canonical	1	1	junction_2	2.18529407725405	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTAAAGTTTAACAAC	NA	False	NA	NA	False	NA	NA	NA	23673027	23660300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_23663012_23664619_23664647_23664736_23664758_23665941_23666116_23666888_23667171_23670298_23670647_23672002_23672133_23672805
tx.25898	chr13	-	10298	9	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	39	-8	intron_retention	FALSE	canonical	3	172	junction_3	16.8226038412607	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAGCAGTCTGGACA	NA	False	NA	NA	False	NA	NA	NA	25204323	25171473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
tx.25899	chr13	-	6949	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	47	-13	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	74.8868479774653	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAAAAATCAGCAGTCT	NA	False	NA	NA	False	NA	NA	NA	25204315	25171478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183056_25185609_25185741_25188925_25189039_25190421_25190459_25202502_25202577_25204064
tx.259	chr1	-	4410	15	FSM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	10	1176	1	0	multi-exon	FALSE	canonical	3	106	junction_8	52.7471829211992	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	52272381	52224438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
tx.2590	chr11	+	3883	4	FSM	ENSMUSG00000044950.8	ENSMUST00000094294.5	1814	4	-65	-2004	-5	924	multi-exon	FALSE	canonical	3	18	junction_2	38.4013888637725	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTTAAGAACTGTTT	NA	False	NA	NA	False	NA	NA	NA	43572819	43613242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_43573444_43595360_43596305_43607856_43607977_43611047
tx.25900	chr13	-	6364	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	66	-562	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	57.9731834558014	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGAGTGTAATTTAA	NA	False	NA	NA	False	NA	NA	NA	25204296	25172027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185741_25188925_25189039_25190421_25190459_25202502_25202577_25204064
tx.25901	chr13	-	6265	10	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	65	-588	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	64.5194965270093	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAAAATGGAAAT	NA	False	NA	NA	False	NA	NA	NA	25204297	25172053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
tx.25902	chr13	+	2105	11	NNC	ENSMUSG00000035910.16	novel	6634	10	NA	NA	-722	433	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	5.69209978830308	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTAGTTTCAGAGATAA	NA	False	NA	NA	False	NA	NA	NA	25239264	25389951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_25239425_25240186_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
tx.25903	chr13	-	5067	16	ISM	ENSMUSG00000021357.15	ENSMUST00000102946.8	4375	29	65690	4	41221	-4	3prime_fragment	FALSE	canonical	3	112	junction_15	16.1561821672765	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGTTGTGTTTGTGTC	8867	False	NA	NA	False	NA	NA	NA	31068591	30997905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231
tx.25904	chr13	-	1548	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	145.701464188479	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8600	False	NA	NA	False	NA	NA	NA	34119838	34101909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119551
tx.25905	chr13	-	2511	10	NNC	ENSMUSG00000038267.16	novel	786	4	NA	NA	-100	-5333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.44527358566709	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTGTGTTAACATTA	NA	False	NA	NA	False	NA	NA	NA	34529265	34372182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_34372521_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140_34489245_34528141
tx.25906	chr13	-	3424	8	NIC	ENSMUSG00000021432.16	novel	1701	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	39	junction_5	8.54280936441489	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	NA	NA	NA	39144510	39116283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139624_39139913_39144407
tx.25907	chr13	+	2171	16	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2302	-8	multi-exon	FALSE	canonical	3	12	junction_3	8.50620688412618	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGATCAGTTAGTGTG	NA	False	NA	NA	False	NA	NA	NA	41299969	41332498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr13_+_41300150_41302269_41302328_41302410_41302490_41303953_41304003_41306165_41306311_41306906_41306957_41308994_41309122_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41327933_41330358_41330421_41331657
tx.25908	chr13	-	4317	7	FSM	ENSMUSG00000021365.16	ENSMUST00000163623.3	4626	7	250	59	250	-59	multi-exon	FALSE	canonical	1	1	junction_3	1.46249406456535	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTTCTTTTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	41512473	41463454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_41465647_41467841_41467932_41469249_41470492_41471337_41471440_41471919_41472022_41492052_41492497_41512328
tx.25909	chr13	+	7352	2	FSM	ENSMUSG00000087370.4	ENSMUST00000221694.2	602	2	-46	-6704	-46	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCTGAACTCCTGGC	NA	False	NA	NA	False	NA	NA	NA	41759336	41794831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_41759789_41787931
tx.2591	chr11	-	1458	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-14	-6	-4	6	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	601	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTATGTTGTTAATTT	NA	False	NA	NA	False	NA	NA	NA	43638823	43620829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
tx.25910	chr13	-	2945	4	ISM	ENSMUSG00000057531.15	ENSMUST00000222805.2	1231	8	-16	31664	-11	-626	5prime_fragment	FALSE	canonical	3	511	junction_1	34.7211110933328	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATATTTAAATATGCTGT	NA	False	NA	NA	False	NA	NA	NA	45155583	45136922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_45139572_45145494_45145546_45147160_45147215_45155392
tx.25911	chr13	+	4643	8	FSM	ENSMUSG00000038068.16	ENSMUST00000068891.12	4640	8	-3	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_6	2.49079939630896	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTTAGCCTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	47276128	47401467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_47276350_47360835_47361027_47373969_47374075_47382415_47382477_47390878_47391078_47393192_47393338_47396339_47396430_47397836
tx.25912	chr13	-	4131	5	FSM	ENSMUSG00000050954.16	ENSMUST00000176949.2	417	5	-32	-3682	-7	-1	multi-exon	FALSE	canonical	1	1	junction_1	6.34428877022476	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCCATCAGTTTATCTC	NA	False	NA	NA	False	NA	NA	NA	48666934	48641123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_48644873_48651798_48651895_48652255_48652383_48660382_48660470_48666862
tx.25913	chr13	-	6449	27	NIC	ENSMUSG00000037989.16	novel	6738	28	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	3.27894484399186	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGACTTTGGTATTTC	7735	False	NA	NA	False	NA	NA	NA	49301502	49189785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_49189982_49192567_49192680_49196103_49196343_49204832_49205004_49206034_49206250_49210310_49210991_49211087_49211177_49213826_49213903_49214176_49214998_49220722_49220843_49221392_49221439_49221548_49221720_49224245_49224363_49224430_49224600_49225466_49225517_49229612_49230141_49231534_49231727_49232146_49232303_49235379_49235580_49238725_49239018_49244292_49244513_49245711_49245801_49248816_49248975_49254438_49254660_49256265_49256439_49300027_49300711_49301237
tx.25914	chr13	+	1245	4	FSM	ENSMUSG00000037966.16	ENSMUST00000131280.2	706	4	-52	-487	-1	2	multi-exon	FALSE	canonical	2	4	junction_2	185.030327844443	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTTCCATGTGCCACC	NA	False	NA	NA	False	NA	NA	NA	49340959	49349722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_49341114_49347211_49347441_49348314_49348534_49349079
tx.25915	chr13	+	5051	9	NIC	ENSMUSG00000037816.11	novel	1798	10	NA	NA	-30	3131	intron_retention	FALSE	canonical	3	15	junction_6	3.80788655293195	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGGAGCCATGTGTGA	NA	False	NA	NA	False	NA	NA	NA	50571869	50590947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586592_50587333
tx.25916	chr13	-	2750	2	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGCCCTGGGACTGGA	NA	False	NA	NA	False	NA	NA	NA	50607717	50600782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_-_50603447_50607631
tx.25917	chr13	+	3602	4	ISM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	30258	3	601	-3	3prime_fragment	FALSE	canonical	3	407	junction_1	42.9262934186807	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	9868	False	NA	NA	False	NA	NA	NA	54799854	54811873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_54800034_54803218_54803391_54804094_54804239_54808766
tx.25918	chr13	+	1758	3	ISM	ENSMUSG00000074895.11	ENSMUST00000110003.9	2131	6	2271	-2	2264	2	3prime_fragment	FALSE	canonical	1	2	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAACTTGGAATCTAAAT	NA	False	NA	NA	False	NA	NA	NA	54934096	54936266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_54934546_54934661_54934802_54935097
tx.25919	chr13	+	2201	7	FSM	ENSMUSG00000035509.18	ENSMUST00000045428.7	1965	7	-76	-160	-40	48	multi-exon	FALSE	canonical	1	1	junction_5	3.77123616632825	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAGCATCTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	56670244	56685759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_56670436_56671322_56671417_56673454_56673586_56674727_56675095_56675530_56675654_56680105_56680278_56684636
tx.2592	chr11	-	7266	7	NIC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	-1	6	intron_retention	FALSE	canonical	3	649	junction_4	53.2741859523812	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTATGTTGTTAATTT	NA	False	NA	NA	False	NA	NA	NA	43638820	43620829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
tx.25920	chr13	+	909	4	FSM	ENSMUSG00000035509.18	ENSMUST00000124981.2	3507	4	-25	2623	-3	-4	multi-exon	FALSE	canonical	2	8	junction_3	0.816496580927726	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAGTTTCTCACTGG	NA	False	NA	NA	False	NA	NA	NA	56670300	56675276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_56670436_56671322_56671417_56673454_56673586_56674727
tx.25921	chr13	+	6348	7	NNC	ENSMUSG00000021540.17	novel	6584	7	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	29.6348143611905	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCTTTGTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	56850888	56890189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_56850945_56871241_56871810_56875385_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
tx.25922	chr13	+	4087	2	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACGGCCGCAACGGGTGC	NA	False	NA	NA	False	NA	NA	NA	61977456	61981755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_61981506_61981717
tx.25923	chr13	+	5522	2	Antisense	novelGene_ENSMUSG00000074863.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTCCTGAGTTCAAATC	NA	False	NA	NA	False	NA	NA	NA	62846406	62852012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr13_+_62848435_62848518
tx.25924	chr13	+	3561	2	Antisense	novelGene_ENSMUSG00000074863.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACACACACACACACAT	NA	False	NA	NA	False	NA	NA	NA	62851418	62855343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr13_+_62853586_62853949
tx.25925	chr13	-	2967	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_2	40.6849139389802	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATATTCAGACCTTCC	NA	False	NA	NA	False	NA	NA	NA	63579537	63459572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_63460618_63464997_63465075_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
tx.25926	chr13	-	4136	8	NIC	ENSMUSG00000033114.12	novel	1474	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	15	junction_5	34.672814734784	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGATGAGATTTCCCA	NA	False	NA	NA	False	NA	NA	NA	64277154	64249091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64268408_64268496_64270132_64270167_64276999
tx.25927	chr13	-	3072	6	NNC	ENSMUSG00000021482.11	novel	3011	6	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	71.4030811660113	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTCTGGGTTCT	NA	False	NA	NA	False	NA	NA	NA	64460543	64437609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460039_64460150_64460306
tx.25928	chr13	-	2520	14	NNC	ENSMUSG00000033063.9	novel	6344	24	NA	NA	-15	-15346	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.38033526499434	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGACAGATTATTGTT	1035	False	NA	NA	False	NA	NA	NA	65051784	64911788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_64912096_64919769_64919968_64920482_64920603_64926603_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411_65006606_65035506_65035618_65051560
tx.25929	chr13	+	2873	3	FSM	ENSMUSG00000110393.3	ENSMUST00000210653.2	1489	3	-285	-1099	-285	12	multi-exon	FALSE	canonical	3	28	junction_1	4	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTGCTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	65389281	65397980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_65389830_65395454_65395582_65395782
tx.2593	chr11	-	2085	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	1	2	1	0	multi-exon	FALSE	canonical	2	61	junction_9	50.7897627480184	271	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	False	NA	NA	False	NA	NA	NA	44361324	44345399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
tx.25930	chr13	-	191	3	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGTAAACATACTAACTT	NA	False	NA	NA	False	NA	NA	NA	66044748	65934361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_-_65934431_65934820_65934862_66044667
tx.25931	chr13	-	2956	4	FSM	ENSMUSG00000090641.3	ENSMUST00000167565.3	3968	4	15	997	15	-997	multi-exon	FALSE	canonical	1	1	junction_3	4.10960933531265	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTTTATTGGATAGC	NA	False	NA	NA	False	NA	NA	NA	67209219	67187656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67190297_67192821_67192918_67200350_67200478_67209126
tx.25932	chr13	+	2744	4	FSM	ENSMUSG00000051037.16	ENSMUST00000120861.8	2712	4	-33	1	-33	-1	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGTTTATTATTATTA	NA	False	NA	NA	False	NA	NA	NA	67342536	67357361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_67342659_67346596_67346724_67347212_67347309_67354962
tx.25933	chr13	+	4798	2	FSM	ENSMUSG00000114442.2	ENSMUST00000224844.2	4257	2	-2	-539	-2	539	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGATTGGCTCCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	67426638	67431964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_67426670_67427197
tx.25934	chr13	+	4802	2	NNC	ENSMUSG00000114442.2	novel	3162	4	NA	NA	17	537	intron_retention	FALSE	canonical	0	0	junction_1	0	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGATTGGCTCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	67426676	67431962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_67426810_67427293
tx.25935	chr13	-	4321	4	NNC	ENSMUSG00000097333.8	novel	2656	4	NA	NA	2	1732	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5612821717283	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTACTAAAGGTTGGCTA	9224	False	NA	NA	False	NA	NA	NA	67674294	67662167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_67666167_67668744_67668841_67669311_67669439_67674195
tx.25936	chr13	+	2218	3	ISM	ENSMUSG00000097360.9	ENSMUST00000180908.9	1084	4	10	-4	10	4	intron_retention	FALSE	canonical	2	5	junction_2	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTAGTTCAGTAGCACA	NA	False	NA	NA	False	NA	NA	NA	67701362	67709355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_67701473_67701692_67701749_67707303
tx.25937	chr13	-	3185	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-8	82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	101.650085075805	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	NA	False	NA	NA	NA	68730248	68709399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727675_68727816_68728669_68728835_68730183
tx.25938	chr13	-	2123	4	ISM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	11087	3	-5526	-3	3prime_fragment	FALSE	canonical	2	14	junction_3	7.87400787401181	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTATTGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	69748474	69721570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349
tx.25939	chr13	+	3425	15	ISM	ENSMUSG00000021611.10	ENSMUST00000223303.2	3730	17	914	2	893	-2	3prime_fragment	FALSE	canonical	3	21	junction_1	5.49953615854862	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTGTCATACTAATT	3116	False	NA	NA	False	NA	NA	NA	73776022	73797960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
tx.2594	chr11	+	3568	11	FSM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	2	0	2	0	multi-exon	TRUE	canonical	3	286	junction_6	37.2538588605261	644	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9729	False	NA	NA	False	NA	NA	NA	44409792	44456347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
tx.25940	chr13	-	4022	11	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	-138	intron_retention	FALSE	canonical	3	27	junction_4	30.0348131340949	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTAACTTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	74210420	74185961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
tx.25941	chr13	-	1373	5	ISM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	21888	0	79	0	3prime_fragment	FALSE	canonical	3	1673	junction_4	114.39187034051	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74476511	74470372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415
tx.25942	chr13	-	251	2	Antisense	novelGene_ENSMUSG00000113212.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCTTTTAGATATGTG	NA	False	NA	NA	False	NA	NA	NA	74675086	74555739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr13_-_74555793_74674888
tx.25943	chr13	-	2811	29	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	-18	5	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	26.471658891913	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGAACTCTACTTTCT	NA	False	NA	NA	False	NA	NA	NA	74918786	74842368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
tx.25944	chr13	-	3527	9	NNC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	-96	-460	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	11.146748404804	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAAATATTCTTTAA	9680	False	NA	NA	False	NA	NA	NA	76246875	76209000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76237234_76237469_76239776_76239937_76242006_76242137_76246492
tx.25945	chr13	-	3332	8	NNC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	-822	2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_7	90.6088250871485	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTTGCAGTGAACATT	NA	False	NA	NA	False	NA	NA	NA	81859954	81821959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81859522
tx.25946	chr13	+	2154	10	NNC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	401.984183707042	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	85337556	85361842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85349429_85349569_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
tx.25947	chr13	+	178	2	Antisense	novelGene_ENSMUSG00000021619.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAATGTACTTC	NA	False	NA	NA	False	NA	NA	NA	91293897	91349069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr13_+_91294044_91349037
tx.25948	chr13	+	1623	16	FSM	ENSMUSG00000003992.16	ENSMUST00000042122.15	1633	16	18	-8	18	8	multi-exon	FALSE	canonical	3	11	junction_4	12.5973542195706	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACTGTGTCTGAAGCAA	2780	False	NA	NA	False	NA	NA	NA	91609227	91849363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
tx.25949	chr13	-	3101	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	-21	1	-21	0	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	93328914	93282790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
tx.2595	chr11	+	3960	11	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	107.560401635546	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTGTATTCCTGTGATG	9730	False	NA	NA	False	NA	NA	NA	44409793	44456346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_44410496_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
tx.25950	chr13	-	3170	16	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	161.140711457064	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATTGTTGAGGTGTTA	NA	False	NA	NA	False	NA	NA	NA	93328922	93282793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328300_93328365_93328601
tx.25951	chr13	+	4318	13	ISM	ENSMUSG00000042102.8	ENSMUST00000048001.8	2992	16	-29	33015	-29	7650	5prime_fragment	FALSE	canonical	2	5	junction_1	2.84189881749666	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACATGAGATTCTTGTTT	2445	False	NA	NA	False	NA	NA	NA	93810911	93856326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_93811041_93813542_93813712_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062
tx.25952	chr13	+	4139	12	NNC	ENSMUSG00000042102.8	novel	2992	16	NA	NA	9140	7652	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3.0775110690565	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGAGATTCTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	93820080	93856328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_93820198_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062
tx.25953	chr13	-	2898	5	Genic_Genomic	ENSMUSG00000098238.2	novel	929	1	NA	NA	-23517	1503	multi-exon	FALSE	canonical	2	7	junction_2	7.39509972887452	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTTGATCTTCCTTATAT	NA	False	NA	NA	False	NA	NA	NA	97619102	97593153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr13_-_97595665_97596691_97596774_97618046_97618132_97618599_97618764_97619046
tx.25954	chr13	+	2656	8	NIC	ENSMUSG00000021661.17	novel	1755	9	NA	NA	-21	-6	intron_retention	FALSE	canonical	3	142	junction_1	21.9396202969767	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	NA	False	NA	NA	NA	98399625	98410420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_98399985_98402658_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
tx.25955	chr13	+	2350	5	NNC	ENSMUSG00000097848.3	novel	408	3	NA	NA	10	7641	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	0.82915619758885	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACAAGAAATGCAATTTG	6950	False	NA	NA	False	NA	NA	NA	99237223	99251729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_99237334_99247103_99247245_99247637_99247676_99249276_99249365_99249756
tx.25956	chr13	-	1765	11	NNC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	145.919292761444	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGTTGTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	99481195	99456156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_99456902_99458068_99458183_99462131_99462213_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
tx.25957	chr13	-	11329	4	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	74802	21	2206	-21	3prime_fragment	FALSE	canonical	3	46	junction_3	17.9133717900592	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCATGTGTTGAGACAT	7419	False	NA	NA	False	NA	NA	NA	99578246	99557974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141
tx.25958	chr13	-	9860	39	NNC	ENSMUSG00000049658.14	novel	9921	39	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	12.8870277707679	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTTTGTCCTTTTCA	6761	False	NA	NA	False	NA	NA	NA	100240576	100154503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_100156919_100160107_100160364_100161904_100162164_100163942_100163980_100167292_100167441_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
tx.25959	chr13	-	3923	8	ISM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	11325	6	11287	-6	3prime_fragment	FALSE	canonical	3	61	junction_7	7.43955232359516	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTAAATACTAGTCCAC	NA	False	NA	NA	False	NA	NA	NA	100677681	100633020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575
tx.2596	chr11	+	199	3	FSM	ENSMUSG00000057098.15	ENSMUST00000138452.2	349	3	162	-12	162	2	multi-exon	FALSE	canonical	3	5	junction_2	1.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCACTCTTCTTTCAC	NA	False	NA	NA	False	NA	NA	NA	44512749	44534298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_44512804_44523577_44523652_44534227
tx.25960	chr13	-	4830	3	Fusion	ENSMUSG00000041417.16_ENSMUSG00000104214.2	novel	2706	2	NA	NA	-26	6	multi-exon	FALSE	canonical	0	0	junction_1	13.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTCAATATTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	101904751	101886221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr13_-_101890071_101893833_101894548_101904484
tx.25961	chr13	-	1322	3	NIC	ENSMUSG00000034751.18	novel	249	2	NA	NA	13	402	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTCTTTGTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	103470987	103304122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_103304647_103307910_103308065_103470343
tx.25962	chr13	-	6468	25	NIC	ENSMUSG00000021709.15	novel	6224	26	NA	NA	-142	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	17.3060181407766	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	104057164	103955298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
tx.25963	chr13	+	5468	4	ISM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	12	46196	12	-46193	5prime_fragment	FALSE	canonical	3	41	junction_1	2.35702260395516	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCAAGTCATGGGATT	NA	False	NA	NA	False	NA	NA	NA	113429704	113460853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268
tx.25964	chr13	+	5516	2	ISM	ENSMUSG00000021763.18	ENSMUST00000078163.14	3546	6	23536	-2289	14481	2286	intron_retention	FALSE	canonical	3	29	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAAATGCTTTCTATTC	NA	False	NA	NA	False	NA	NA	NA	113502617	113509335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_113502802_113504003
tx.25965	chr13	+	5163	7	NIC	ENSMUSG00000062822.9	novel	2795	13	NA	NA	7843	1	intron_retention	FALSE	canonical	3	100	junction_3	16.60739460468	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTCATTTCTTACAT	NA	False	NA	NA	False	NA	NA	NA	119607162	119622654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
tx.25966	chr14	-	4629	4	FSM	ENSMUSG00000021772.16	ENSMUST00000133460.2	619	4	-49	-3961	1	0	multi-exon	FALSE	canonical	2	6	junction_3	47.8493004709113	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTAGTCCCAATAAGATT	NA	False	NA	NA	False	NA	NA	NA	4198559	4185692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_4189750_4191150_4191393_4192727_4192871_4198372
tx.25967	chr14	+	3920	2	ISM	ENSMUSG00000021786.14	ENSMUST00000022311.12	3759	3	6503	14	-18	-14	3prime_fragment	FALSE	canonical	3	21	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAACAAAAAAAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	6226457	6231097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_6227973_6228692
tx.2597	chr11	+	3457	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	45742785	45801452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
tx.25970	chr14	+	4251	2	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	6925	False	NA	NA	False	NA	NA	NA	8013521	8018481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_8017543_8018251
tx.25971	chr14	-	2562	5	NIC	ENSMUSG00000033111.17	novel	2452	5	NA	NA	0	13	intron_retention	FALSE	canonical	1	6	junction_4	62.3232500757141	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTGTTTTCTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	10185505	10166626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185215
tx.25972	chr14	-	5485	10	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	9.35051328887522	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGATAGTATTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	10256120	10227724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956
tx.25973	chr14	-	6799	18	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_16	11.2409902407081	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGATAGTATTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	10315874	10227724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336
tx.25974	chr14	+	3237	15	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	-32	-31937	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	42.1745643433459	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGGCTTTAGTTAT	NA	False	NA	NA	False	NA	NA	NA	13803500	14006644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14005498
tx.25975	chr14	-	1966	8	FSM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	-8	0	-8	0	multi-exon	FALSE	canonical	3	7	junction_7	23.7589940005541	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTGAATTCAGTGAA	NA	False	NA	NA	False	NA	NA	NA	14466862	14413107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14466809
tx.25976	chr14	+	4746	7	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90038	2754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.6519180571966	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTACAGAGTATGGGC	7030	False	NA	NA	False	NA	NA	NA	14811168	14927376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_14811253_14907121_14907273_14917011_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
tx.25977	chr14	+	5410	5	ISM	ENSMUSG00000079364.4	ENSMUST00000163790.2	2055	7	12146	6	12146	-6	3prime_fragment	FALSE	canonical	0	0	junction_2	24.802973612049	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	NA	NA	NA	14913352	14924616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
tx.25978	chr14	+	1967	7	NNC	ENSMUSG00000091472.3	novel	2011	7	NA	NA	-173562	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.28269227499026	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCT	NA	False	NA	NA	False	NA	NA	NA	14981161	15176072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_14981235_15156188_15156303_15159475_15159627_15170282_15170446_15171398_15171531_15172205_15172389_15174921
tx.25979	chr14	+	1735	5	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14667	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.6624340560681	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	NA	NA	NA	16042623	16063940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_16042755_16058159_16058323_16059272_16059405_16060080_16060263_16062813
tx.2598	chr11	+	3400	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	-3	1	-3	-1	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	700	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGGCCCGCCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	45742787	45801451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
tx.25980	chr14	+	1823	5	Fusion	ENSMUSG00000091275.2_ENSMUSG00000094370.8	novel	2055	7	NA	NA	-68	-3	multi-exon	FALSE	canonical	0	0	junction_1	7.79422863405995	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	NA	False	NA	NA	False	NA	NA	NA	16507959	16751434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_+_16508175_16744691_16744855_16745804_16745937_16746611_16746795_16750304
tx.25981	chr14	-	1734	4	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGTCCCATAGATCCA	NA	False	NA	NA	False	NA	NA	NA	17970758	17958129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_17959326_17965695_17965847_17968999_17969114_17970485
tx.25982	chr14	-	2150	4	NNC	ENSMUSG00000096775.2	novel	1817	6	NA	NA	-4962	-9246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCTTTTGAGTGCTGA	NA	False	NA	NA	False	NA	NA	NA	18450794	18437648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_18439407_18445775_18445927_18449362_18449477_18450667
tx.25983	chr14	-	1727	5	Fusion	ENSMUSG00000096488.2_ENSMUSG00000095195.8	novel	1955	7	NA	NA	4	5	multi-exon	FALSE	canonical	0	0	junction_3	1.6393596310755	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGCTTCTGCGTTCCT	NA	False	NA	NA	False	NA	NA	NA	19057155	18875547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_-_18876696_18880194_18880378_18881053_18881186_18882135_18882299_19057054
tx.25984	chr14	-	1548	3	FSM	ENSMUSG00000097577.3	ENSMUST00000180987.2	1554	3	6	0	6	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTAGGCTCTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	20753074	20737303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20738682_20738832_20738908_20752979
tx.25985	chr14	-	4497	2	ISM	ENSMUSG00000039081.11	ENSMUST00000043409.9	4216	3	120	339	120	-339	intron_retention	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAATGAAAACGAC	NA	False	NA	NA	False	NA	NA	NA	22039549	22034365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_22036585_22037271
tx.25986	chr14	-	7028	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-55	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	97.0854292801572	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTATGAAATATTTAG	NA	False	NA	NA	False	NA	NA	NA	26692517	26640942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684066_26684123_26684762_26684835_26685603_26685664_26686815_26686915_26692357
tx.25987	chr14	+	739	2	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTGCTTCTTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	26742951	26743980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_26743235_26743524
tx.25988	chr14	+	8171	13	NNC	ENSMUSG00000040717.7	novel	8280	13	NA	NA	-53	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	5.67646212197547	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGCAGTGGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	26760982	26829240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817880_26818045_26821439_26822383_26823233
tx.25989	chr14	+	4033	12	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.3454887217743	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	NA	NA	NA	26836810	27125868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_26837273_26874918_26875013_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
tx.2599	chr11	-	3998	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	5	2450	5	361	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCTAGCTACCTGAAT	NA	False	NA	NA	False	NA	NA	NA	45835757	45821545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
tx.25990	chr14	-	3035	19	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.3637067127824	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7541	False	NA	NA	False	NA	NA	NA	27230402	27204357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27209291_27209391_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
tx.25991	chr14	+	2719	5	NIC	ENSMUSG00000040640.12	novel	1099	4	NA	NA	-64	1453	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	19.8289560996034	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTGTTATTCCAAGG	2262	False	NA	NA	False	NA	NA	NA	27344320	27377212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_27344572_27345639_27345707_27350368_27350423_27374643_27375441_27375662
tx.25992	chr14	+	6100	16	FSM	ENSMUSG00000040640.12	ENSMUST00000090302.6	6083	16	-19	2	-5	0	multi-exon	FALSE	canonical	0	0	junction_2	8.37191070717365	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATCTTACCTTTTACA	2321	False	NA	NA	False	NA	NA	NA	27344379	28200492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_27344572_27374643_27375441_27498782_27499200_27598543_27598619_27620522_27620679_27634769_27634938_27688352_27688521_27733592_27733731_27743918_27744060_27746989_27747131_27762299_27762494_27802088_27802225_27863177_27863339_27993534_27993683_28024832_28024968_28197559
tx.25993	chr14	+	1414	10	NNC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	43.7670601657863	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3528	False	NA	NA	False	NA	NA	NA	30723358	30733947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731728_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
tx.25994	chr14	+	10590	3	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	15	-175	intron_retention	FALSE	canonical	3	223	junction_1	18	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGTCTTGTTTTATT	6414	False	NA	NA	False	NA	NA	NA	31217167	31231640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_31224411_31226243_31226478_31228527
tx.25995	chr14	-	1940	17	NIC	ENSMUSG00000021884.19	novel	2644	17	NA	NA	-5	116	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	13.265910259006	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTGTTTT	6618	False	NA	NA	False	NA	NA	NA	31363248	31329809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31363122
tx.25996	chr14	-	2704	2	NNC	ENSMUSG00000090459.2	novel	391	2	NA	NA	-2316	0	intron_retention	FALSE	canonical	3	32	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTCATTGACAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	32019247	32014880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_32015223_32016885
tx.25997	chr14	+	7852	21	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	16	-377	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	30.4891374099039	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACCCACGTGTTCTCA	NA	False	NA	NA	False	NA	NA	NA	32235502	32302570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_32235557_32238903_32239336_32240899_32241021_32242904_32242950_32248207_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
tx.25998	chr14	+	5580	7	ISM	ENSMUSG00000054051.8	ENSMUST00000228549.2	2899	14	14990	-3886	14990	0	3prime_fragment	FALSE	canonical	2	7	junction_2	4.70519807116437	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACAGTTTTCCTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	32289521	32302947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
tx.25999	chr14	-	1063	6	ISM	ENSMUSG00000051506.18	ENSMUST00000130509.10	10158	62	214183	16	52454	-16	3prime_fragment	FALSE	canonical	3	12	junction_1	3.37045990927054	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTTGAGCGTTACCTT	NA	False	NA	NA	False	NA	NA	NA	32692840	32681519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_32681962_32682698_32682811_32686495_32686581_32688320_32688504_32689429_32689610_32692779
tx.26	chr1	+	3276	16	NIC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	16	-219	combination_of_known_splicesites	FALSE	canonical	3	9	junction_13	31.8631797255425	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTAGATTTTTGTTGTT	9830	False	NA	NA	False	NA	NA	NA	9918512	9970776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9959094_9959251_9961585_9961676_9968944
tx.260	chr1	-	4469	15	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	64.5226190366366	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	52272381	52224438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
tx.2600	chr11	-	1231	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	0	1019	0	-1019	multi-exon	FALSE	canonical	3	110	junction_3	12.8	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGAGTCATTTTTAGC	6301	False	NA	NA	False	NA	NA	NA	45846321	45838688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
tx.26000	chr14	+	2404	8	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	2.66496544373966	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCTGTCACCAGCCTC	NA	False	NA	NA	False	NA	NA	NA	33041610	33091891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_33041890_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
tx.26001	chr14	+	3357	3	NNC	ENSMUSG00000041445.10	novel	519	5	NA	NA	-9989	-20416	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	2	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAGCCAGGCCTCCTGCT	1415	False	NA	NA	False	NA	NA	NA	34087432	34099469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_34087676_34088315_34088446_34096485
tx.26002	chr14	-	5455	12	NIC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	57	-330	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	38.1107563827604	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATGTGTTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	34224587	34133020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34224351
tx.26003	chr14	-	4005	7	ISM	ENSMUSG00000021798.15	ENSMUST00000090040.12	4981	15	33159	-12	21493	12	3prime_fragment	FALSE	canonical	2	3	junction_5	1.46249406456535	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATACAAATGGCGATGTT	NA	False	NA	NA	False	NA	NA	NA	34277458	34248669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_34251507_34258521_34258638_34263824_34263946_34264383_34264565_34265929_34266375_34274133_34274280_34277299
tx.26004	chr14	-	223	2	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGATTCATTTGTGCCC	2419	False	NA	NA	False	NA	NA	NA	34458073	34393458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_34393494_34457885
tx.26005	chr14	-	7532	11	NIC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	25.7070029369431	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	36690709	36596892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_36601720_36612250_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
tx.26006	chr14	+	740	3	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	9	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	8860	False	NA	NA	False	NA	NA	NA	41146738	41152561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_41146812_41147410_41147894_41152377
tx.26007	chr14	+	3017	4	Antisense	novelGene_ENSMUSG00000095384.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	72.4982758415674	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAGAAAAGTCACTCAGA	NA	False	NA	NA	False	NA	NA	NA	43169939	43213483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_+_43170061_43170454_43170526_43173084_43173568_43211141
tx.26008	chr14	+	2101	3	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45940	834	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	3	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAATATGGATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	43735092	43789504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_43735407_43783111_43783244_43787849
tx.26009	chr14	+	2076	5	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-11775	309	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	11.056672193748	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAATATAAAAGCTGGT	NA	False	NA	NA	False	NA	NA	NA	43769257	43788979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_43769402_43769911_43770400_43783111_43783244_43783926_43784109_43787849
tx.2601	chr11	+	6367	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	16	0	16	0	multi-exon	TRUE	canonical	3	430	junction_20	39.4256282802095	808	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	NA	False	NA	NA	NA	45946834	46038170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
tx.26010	chr14	+	4276	12	FSM	ENSMUSG00000053205.10	ENSMUST00000226303.2	1730	12	4	-2550	-1	-32	multi-exon	FALSE	canonical	2	2	junction_3	88.5079255917908	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGGTTGTATTAAAACT	NA	False	NA	NA	False	NA	NA	NA	45588682	45614308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45595673_45595765_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
tx.26011	chr14	+	419	2	FSM	ENSMUSG00000055128.16	ENSMUST00000140114.3	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTAGACGTGAAGATGA	631	False	NA	NA	False	NA	NA	NA	47069675	47077871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_47069837_47077613
tx.26012	chr14	+	190	2	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	302	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTTAAAGAGTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	47811518	47812936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_47811569_47812796
tx.26013	chr14	+	7273	3	ISM	ENSMUSG00000021846.10	ENSMUST00000228519.2	1629	5	63265	-3841	49555	-223	3prime_fragment	FALSE	canonical	3	56	junction_1	8	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTTGTCTTTAGACTC	NA	False	NA	NA	False	NA	NA	NA	48485727	48498122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_48488162_48490033_48490223_48493472
tx.26014	chr14	+	4233	8	ISM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	38583	223	5412	-223	3prime_fragment	FALSE	canonical	3	23	junction_4	4.16496563917521	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTGTTTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	48722421	48752690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
tx.26015	chr14	-	1199	2	NNC	ENSMUSG00000071470.5	novel	444	3	NA	NA	5090	-4309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTATGAGTTGTTCTT	1962	False	NA	NA	False	NA	NA	NA	51040099	51035570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_51036607_51039936
tx.26016	chr14	+	2911	2	ISM	ENSMUSG00000072571.4_ENSMUSG00000115454.2	ENSMUST00000227295.2	704	6	1350	-2156	1350	-402	3prime_fragment	FALSE	canonical	3	19	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCGTAAAGCCTCACTCA	NA	False	NA	NA	False	NA	NA	NA	52255725	52258963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_52256336_52256662
tx.26017	chr14	+	178	2	Antisense	novelGene_ENSMUSG00000035726.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	363	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTATTATGAAACA	1271	False	NA	NA	False	NA	NA	NA	52329380	52431438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_+_52329433_52431312
tx.26018	chr14	+	3526	8	ISM	ENSMUSG00000057132.17	ENSMUST00000180901.8	3212	12	12947	-1320	6	-888	3prime_fragment	FALSE	canonical	2	7	junction_1	2.97609523657138	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACAAGACAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	52386980	52400115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
tx.26019	chr14	+	422	2	Antisense	novelGene_ENSMUSG00000105963.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTCCCGGAACCAAGATG	1095	False	NA	NA	False	NA	NA	NA	54173205	54173848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_+_54173451_54173671
tx.2602	chr11	-	6329	31	FSM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	-36	5	28	-5	multi-exon	FALSE	canonical	3	40	junction_25	27.300895386212	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACCAGCATCTTCGTCC	NA	False	NA	NA	False	NA	NA	NA	46203157	46084686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
tx.26020	chr14	+	2313	6	ISM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	2394	0	-1350	0	3prime_fragment	FALSE	canonical	3	334	junction_4	30.6763752747941	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGACACTGTTTAATA	NA	False	NA	NA	False	NA	NA	NA	54499082	54506621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
tx.26021	chr14	+	1871	5	FSM	ENSMUSG00000022176.12	ENSMUST00000164766.8	1884	5	18	-5	18	5	multi-exon	FALSE	canonical	1	2	junction_4	2.29128784747792	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATCTTGGCTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	54713574	54717893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_54713832_54714927_54715273_54715484_54715559_54716410_54716619_54716906
tx.26022	chr14	+	5088	8	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	28	-1439	intron_retention	FALSE	canonical	3	675	junction_1	17.8199612908716	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTTATTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	55983177	55991518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
tx.26023	chr14	+	3244	3	FSM	ENSMUSG00000023411.13	ENSMUST00000226293.2	2969	3	42	-317	42	0	multi-exon	FALSE	canonical	3	42	junction_1	1	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGGCTCCAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	56067767	56071398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_56069166_56069404_56069532_56069679
tx.26024	chr14	-	2972	8	NNC	ENSMUSG00000040123.18	novel	5351	8	NA	NA	-30	401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.2924520806954	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTATTTTTGTTTTCT	8791	False	NA	NA	False	NA	NA	NA	57049203	57030383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049118
tx.26025	chr14	+	7369	2	NIC	ENSMUSG00000021945.10	novel	2829	18	NA	NA	4065	-302	intron_retention	FALSE	canonical	3	199	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTGTAACTCATGTTT	NA	False	NA	NA	False	NA	NA	NA	57191075	57199856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_57195760_57197171
tx.26026	chr14	+	5192	23	ISM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	4	18771	4	11554	5prime_fragment	TRUE	canonical	3	32	junction_12	10.5282971710678	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTCTTTCCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	57661522	57736622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629
tx.26027	chr14	+	1275	3	FSM	ENSMUSG00000097303.3	ENSMUST00000224786.2	907	3	-362	-6	-301	6	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTTACTGTTGCAT	NA	False	NA	NA	False	NA	NA	NA	58236478	58241160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_58236920_58239766_58239877_58240436
tx.26028	chr14	+	7534	13	NIC	ENSMUSG00000021990.17	novel	7517	13	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	3.66192875711997	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGTTCTAGTGATGCA	NA	False	NA	NA	False	NA	NA	NA	60872123	61001998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_60872314_60928302_60929998_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
tx.26029	chr14	+	5337	2	ISM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	117183	2	117147	-2	3prime_fragment	FALSE	canonical	3	34	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCAGTTGTATCCTTGT	NA	False	NA	NA	False	NA	NA	NA	63192309	63198956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_63192419_63193728
tx.2603	chr11	-	5511	24	ISM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	35405	12	-6220	-12	3prime_fragment	FALSE	canonical	3	87	junction_12	13.4680185487506	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAGTTAAACCAGCATC	NA	False	NA	NA	False	NA	NA	NA	46167716	46084693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605
tx.26030	chr14	-	2706	6	ISM	ENSMUSG00000021944.16	ENSMUST00000118022.8	3374	7	4182	-9	4182	9	3prime_fragment	FALSE	canonical	2	8	junction_5	3.97994974842648	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTCTAACGGGCCTGG	NA	False	NA	NA	False	NA	NA	NA	63478515	63436361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442205_63477984
tx.26031	chr14	+	3771	2	ISM	ENSMUSG00000035095.12	ENSMUST00000121288.2	4231	4	15597	0	15582	0	3prime_fragment	FALSE	canonical	2	8	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATCCAAATAGAGACATT	NA	False	NA	NA	False	NA	NA	NA	63689439	63702947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_63690089_63699825
tx.26032	chr14	-	4940	3	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	15651	-3826	-172	0	3prime_fragment	FALSE	canonical	3	205	junction_2	3	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATGGAATCTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	63765780	63757099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_63761667_63764239_63764392_63765559
tx.26033	chr14	-	3408	11	NNC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	12.983065893694	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCTGTCCGGGATTTC	7666	False	NA	NA	False	NA	NA	NA	65187318	65049049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_65050869_65054465_65054586_65063049_65063139_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
tx.26034	chr14	+	3986	5	ISM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	79280	-1	79012	1	3prime_fragment	FALSE	canonical	3	192	junction_2	18.6077940659284	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGTTCTATTGCACTA	45	False	NA	NA	False	NA	NA	NA	65266773	65277282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
tx.26035	chr14	-	2810	21	ISM	ENSMUSG00000059456.14	ENSMUST00000178730.8	3863	30	37835	5	-5435	-1	3prime_fragment	FALSE	canonical	2	7	junction_12	3.25729949498047	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTAGCTTGACTGTGTCG	NA	False	NA	NA	False	NA	NA	NA	66413166	66390711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072
tx.26036	chr14	-	3245	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	356	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	291.678864506841	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTCCATATATCATTT	NA	False	NA	NA	False	NA	NA	NA	67245949	67222688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67245751
tx.26037	chr14	-	5811	13	ISM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	158880	8	-9593	-8	3prime_fragment	FALSE	canonical	3	80	junction_2	9.31359520032708	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTTTATTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	68012001	67989591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941
tx.26038	chr14	-	4640	4	FSM	ENSMUSG00000034248.8	ENSMUST00000184914.2	2212	4	-103	-2325	42	0	multi-exon	FALSE	canonical	3	36	junction_2	77.0512095225564	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGTGGGGTCTTTG	584	False	NA	NA	False	NA	NA	NA	69522519	69479299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_69482804_69485029_69485087_69486331_69487072_69522180
tx.26039	chr14	+	3430	5	ISM	ENSMUSG00000095463.9	ENSMUST00000064831.6	1842	12	9716	-951	-5256	474	3prime_fragment	FALSE	canonical	3	160	junction_1	27.6631523872461	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGACATTTTAAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	69594751	69604139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
tx.2604	chr11	+	1278	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	-15	-70	12	70	multi-exon	FALSE	canonical	3	177	junction_1	179.5	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATAAAATGTTTAGAT	NA	False	NA	NA	False	NA	NA	NA	46327763	46332424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_46327837_46330632_46330803_46331389
tx.26040	chr14	+	3085	14	FSM	ENSMUSG00000034205.17	ENSMUST00000022660.14	5316	14	95	2136	95	0	multi-exon	FALSE	canonical	0	0	junction_1	1.66410058867569	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTTTGGTTTTTTGT	6132	False	NA	NA	False	NA	NA	NA	69846611	69931147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_69846744_69871332_69871740_69882144_69882321_69898087_69898300_69901348_69901572_69904715_69904900_69910830_69910983_69913124_69913293_69915261_69915425_69919543_69919788_69926476_69926593_69927582_69927720_69929762_69929875_69930488
tx.26041	chr14	-	3624	8	ISM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	5856	895	1042	-895	3prime_fragment	FALSE	canonical	3	83	junction_6	17.1785343034942	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCAACCTACAATTGTG	NA	False	NA	NA	False	NA	NA	NA	70037229	70023333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126
tx.26042	chr14	+	3807	8	ISM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	-14	242	-14	-242	intron_retention	FALSE	canonical	3	54	junction_3	8.9511143987546	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTACTTTAACTGACAC	NA	False	NA	NA	False	NA	NA	NA	70337539	70375413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184
tx.26043	chr14	-	1483	6	NNC	ENSMUSG00000022101.7	novel	1689	5	NA	NA	-114	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	18.6826122370508	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGGGTCCGCTGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	70879822	70873644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_70874464_70875906_70876014_70876241_70876420_70878971_70879009_70879162_70879267_70879584
tx.26044	chr14	-	1043	9	FSM	ENSMUSG00000047911.7	ENSMUST00000062629.5	997	9	-46	0	-46	0	multi-exon	FALSE	canonical	1	3	junction_7	2.75850956133924	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCCCTCTGCCTCCCCC	NA	False	NA	NA	False	NA	NA	NA	70890570	70884741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70884990_70885076_70885111_70885484_70885526_70885699_70885852_70886910_70887005_70889562_70889677_70889768_70889855_70889971_70890136_70890460
tx.26045	chr14	+	3480	9	FSM	ENSMUSG00000022103.11	ENSMUST00000022699.10	3472	9	-7	-1	-7	1	multi-exon	FALSE	canonical	0	0	junction_6	2.43669858620224	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGTGTGTCTTTGCCTA	NA	False	NA	NA	False	NA	NA	NA	71127552	71217279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_71128335_71133211_71133527_71138928_71139013_71163157_71163513_71203646_71203757_71204436_71204578_71205683_71205857_71214695_71214750_71215813
tx.26046	chr14	-	2732	17	ISM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	-173	66326	-173	572	5prime_fragment	FALSE	canonical	3	27	junction_5	7.88194138521722	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTCCCCTAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	73563435	73499267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
tx.26047	chr14	-	4610	19	NIC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	31.1091269208536	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGGATTGATTGACT	536	False	NA	NA	False	NA	NA	NA	75185349	74992114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75095416_75095562_75184823
tx.26048	chr14	-	1794	2	Antisense	novelGene_ENSMUSG00000022010.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGCCTGGCAAGCCCTGC	NA	False	NA	NA	False	NA	NA	NA	76732570	76719533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_-_76721156_76732398
tx.26049	chr14	-	1038	2	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTTGGCTAAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	76753003	76751832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_76752575_76752707
tx.2605	chr11	+	1442	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	-16	1121	-3	73	multi-exon	FALSE	canonical	3	262	junction_1	137	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAATGTTTAGATTTA	NA	False	NA	NA	False	NA	NA	NA	46327784	46332427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_46328019_46330632_46330803_46331389
tx.26050	chr14	+	1303	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	3.5	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCCACCCTCCTGTTCAC	NA	False	NA	NA	False	NA	NA	NA	76753425	76768193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_76753538_76766569_76766669_76767101
tx.26051	chr14	-	911	5	FSM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	-44	-2	-13	0	multi-exon	FALSE	canonical	3	14	junction_2	35.7587401903367	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	False	NA	NA	False	NA	NA	NA	76794342	76770253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_76770687_76777345_76777495_76787421_76787495_76793870_76793989_76794204
tx.26052	chr14	-	8382	6	FSM	ENSMUSG00000022016.18	ENSMUST00000227722.2	760	6	-4120	-3502	-3988	0	multi-exon	FALSE	canonical	3	18	junction_4	17.6476627347646	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTTTTCCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	78751552	78729685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319
tx.26053	chr14	-	9411	12	FSM	ENSMUSG00000022016.18	ENSMUST00000123853.9	9364	12	-49	2	-49	-2	multi-exon	FALSE	canonical	3	18	junction_4	17.0725239604508	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATGGTTTTCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	78774297	78729687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
tx.26054	chr14	-	9366	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-30	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	24.8313318475331	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCATGGTTTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	78774278	78729689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753786_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
tx.26055	chr14	-	9311	11	NIC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-35	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	21.5566695015719	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCATGGTTTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	78774283	78729689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_78733387_78736274_78736436_78739629_78739677_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
tx.26056	chr14	+	5536	2	ISM	ENSMUSG00000058997.9	ENSMUST00000227676.2	3823	5	3	41574	3	-41574	5prime_fragment	FALSE	canonical	3	64	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAAGCTGATTGGCC	9349	False	NA	NA	False	NA	NA	NA	79086634	79111505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_79086884_79106218
tx.26057	chr14	-	2096	2	FSM	ENSMUSG00000033186.10	ENSMUST00000228445.2	818	2	9	-1287	-5	-3	multi-exon	FALSE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTCCTTTTGATA	NA	False	NA	NA	False	NA	NA	NA	99283561	99271982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_99273947_99283429
tx.26058	chr14	-	15033	83	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_50	7.74247154054934	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGTGTAAAGTATTT	NA	False	NA	NA	False	NA	NA	NA	103584257	103350848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376164_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103394204_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
tx.26059	chr14	+	2783	3	Antisense	novelGene_ENSMUSG00000115247.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTCTTTGTTGGGTC	NA	False	NA	NA	False	NA	NA	NA	105428557	105438901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_+_105428715_105435320_105435542_105436496
tx.2606	chr11	+	1133	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	-32	346	-4	0	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	2591	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTATATGTGAGTC	NA	False	NA	NA	False	NA	NA	NA	48691154	48696915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
tx.26060	chr14	+	1728	2	NNC	ENSMUSG00000089726.3	novel	3536	2	NA	NA	1621	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGTATCTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	115281931	115284160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_115283043_115283543
tx.26061	chr14	-	4359	23	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	11.4989219760624	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGTGGCTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	119162880	119113666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146981_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
tx.26062	chr14	-	6990	22	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-13	3	intron_retention	FALSE	canonical	3	9	junction_19	10.2255737382625	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGTGGCTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	119162885	119113666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
tx.26063	chr14	-	7949	54	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	13.5083271392276	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGGTACCTAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	122035305	121779525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
tx.26064	chr14	+	2869	3	FSM	ENSMUSG00000061524.9	ENSMUST00000075888.6	2440	3	48	-477	48	477	multi-exon	FALSE	canonical	2	3	junction_1	2.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATACTTTTTCCCCCC	706	False	NA	NA	False	NA	NA	NA	122712894	122717741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_122714160_122715951_122716116_122716301
tx.26065	chr14	-	1017	2	ISM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	12627	0	12550	0	3prime_fragment	FALSE	canonical	3	40	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTGGTCCTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	123137947	123128271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_123129229_123137887
tx.26066	chr15	-	955	9	FSM	ENSMUSG00000091119.3	ENSMUST00000165386.2	798	9	-30	-127	-30	127	multi-exon	FALSE	canonical	2	12	junction_4	8.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGCATTTATTTTGA	8066	False	NA	NA	False	NA	NA	NA	3333038	3309981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_3310232_3310504_3310589_3312299_3312428_3319606_3319710_3321861_3321927_3323334_3323404_3327582_3327689_3330586_3330676_3332977
tx.26067	chr15	-	718	6	NIC	ENSMUSG00000091119.3	novel	798	9	NA	NA	-30	127	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	10.2878569196893	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGCATTTATTTTGA	8066	False	NA	NA	False	NA	NA	NA	3333038	3309981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_3310232_3310504_3310589_3312299_3312428_3327582_3327689_3330586_3330676_3332977
tx.26068	chr15	-	4655	3	ISM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	6091	4	2425	-4	3prime_fragment	FALSE	canonical	3	219	junction_2	31	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGTTTCTTACTTTC	8271	False	NA	NA	False	NA	NA	NA	4019135	4011520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_4015962_4018072_4018188_4019036
tx.26069	chr15	+	2922	14	FSM	ENSMUSG00000022150.17	ENSMUST00000110663.9	2754	14	-145	-23	33	3	multi-exon	FALSE	canonical	3	5	junction_9	3.86610211480894	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGGCTGTTCCATTTTC	8147	False	NA	NA	False	NA	NA	NA	6416111	6469132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
tx.2607	chr11	-	3987	4	ISM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	5912	-1	954	1	3prime_fragment	FALSE	canonical	3	37	junction_2	3.68178700572909	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTGGACTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	48702268	48697229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876
tx.26070	chr15	-	2882	3	NIC	ENSMUSG00000089647.3	novel	3376	7	NA	NA	-13042	43	intron_retention	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAACTCTCTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	6649405	6633778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_6636386_6639577_6639674_6649226
tx.26071	chr15	-	4852	18	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	120988	790	intron_retention	FALSE	canonical	3	42	junction_16	15.1504565007108	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTCCGAGCTCTACTTC	8800	False	NA	NA	False	NA	NA	NA	8352959	8319310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892
tx.26072	chr15	-	7031	2	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	117	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	9226309	9219242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_9220307_9220342
tx.26073	chr15	-	8403	11	ISM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-68	9	-68	0	intron_retention	FALSE	canonical	3	660	junction_1	63.7435486931815	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTGCCTTTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	10470670	10446850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972
tx.26074	chr15	+	1209	7	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	359.073653849581	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTTACTGTACTGTCC	27	False	NA	NA	False	NA	NA	NA	10486126	10493766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_10486159_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
tx.26075	chr15	+	2790	7	NIC	ENSMUSG00000022270.17	novel	579	6	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	10.719919153924	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTTATGTGTATGC	35	False	NA	NA	False	NA	NA	NA	25933598	25973772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_25933713_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
tx.26077	chr15	+	2340	10	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473657	105924	176	-98659	internal_fragment	FALSE	canonical	3	25	junction_9	11.0933190883099	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACCATTTGAATGTTA	-26	True	NA	NA	False	NA	NA	NA	30646853	30922263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000
tx.26079	chr15	-	5684	22	ISM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	30065	10	3566	-10	3prime_fragment	FALSE	canonical	3	82	junction_10	17.1162491917639	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGTTTTCTTTTTGG	2406	False	NA	NA	False	NA	NA	NA	31501134	31456046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061
tx.2608	chr11	-	2716	6	FSM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	716	0	316	0	multi-exon	FALSE	canonical	3	31	junction_5	5.01996015920445	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	48707464	48697230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
tx.26080	chr15	+	680	2	FSM	ENSMUSG00000039065.12	ENSMUST00000160146.2	4655	2	269	3706	3	-14	multi-exon	FALSE	canonical	2	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCATTTAGCTTTATAAC	118	False	NA	NA	False	NA	NA	NA	31602266	31617667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_31602296_31617016
tx.26081	chr15	+	1279	6	FSM	ENSMUSG00000039065.12	ENSMUST00000161061.3	2364	6	13	1072	13	2	multi-exon	FALSE	canonical	0	0	junction_1	11.3490087672889	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCGTGACAAGGAGTGTT	128	False	NA	NA	False	NA	NA	NA	31602276	31617683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_31602296_31603594_31603721_31606056_31606335_31608241_31608380_31609711_31609763_31617016
tx.26082	chr15	+	3358	3	ISM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	-161	8785	-161	-8785	5prime_fragment	FALSE	canonical	3	85	junction_1	4.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGGGTCAAAGCTTC	NA	False	NA	NA	False	NA	NA	NA	32920707	33026296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_32921452_33017247_33017360_33023794
tx.26083	chr15	+	3281	5	ISM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	18835	-11	-12	0	3prime_fragment	FALSE	canonical	3	55	junction_3	3.8405728739343	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATTTGTTTTTAATCT	NA	False	NA	NA	False	NA	NA	NA	34514303	34530794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
tx.26084	chr15	-	1916	12	NNC	ENSMUSG00000038879.9	novel	4331	11	NA	NA	4	592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.49734255666752	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACAGGGGTGTTCTGTG	-1	True	NA	NA	False	NA	NA	NA	34678885	34575059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_34575718_34577715_34577811_34578853_34578918_34582866_34582956_34584775_34584912_34600160_34600258_34609318_34609441_34624492_34624666_34625117_34625178_34648811_34648984_34650527_34650597_34678704
tx.26085	chr15	+	5298	2	FSM	ENSMUSG00000050963.8	ENSMUST00000072868.5	5456	2	147	11	147	-11	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCACTTCCCTAAGGTC	228	False	NA	NA	False	NA	NA	NA	34837647	34843542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_34837999_34838595
tx.26086	chr15	+	998	3	FSM	ENSMUSG00000022330.6	ENSMUST00000228684.2	579	3	-53	-366	-40	1	multi-exon	FALSE	canonical	2	8	junction_1	9.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGAGATTCATCTT	77	False	NA	NA	False	NA	NA	NA	35296203	35303452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_35296614_35302057_35302158_35302964
tx.26087	chr15	-	2915	8	NIC	ENSMUSG00000037627.17	novel	4006	28	NA	NA	-79	40069	intron_retention	FALSE	canonical	1	2	junction_3	1.45686271816937	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTCCAGTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	36140625	36098297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_36100362_36101872_36102003_36103865_36104035_36104633_36104720_36107045_36107268_36122415_36122479_36140024_36140054_36140473
tx.26088	chr15	+	6663	2	NIC	ENSMUSG00000037617.13	novel	3219	19	NA	NA	1750	0	intron_retention	FALSE	canonical	3	55	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTGGTGGCAGTTCT	2346	False	NA	NA	False	NA	NA	NA	36228563	36235323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_36234816_36234912
tx.26089	chr15	-	4112	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	55	combination_of_known_junctions	FALSE	canonical	2	62	junction_3	129.988874285519	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	NA	False	NA	NA	NA	38519510	38488426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
tx.2609	chr11	+	2283	7	NNC	ENSMUSG00000040350.17	novel	3876	2	NA	NA	133	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5723301886761	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGGGTGTCTGGAC	NA	False	NA	NA	False	NA	NA	NA	48729473	48742014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_48729545_48729663_48729760_48736262_48736494_48738341_48738365_48738851_48738968_48739399_48739436_48740304
tx.26090	chr15	-	2370	3	NNC	ENSMUSG00000022304.14	novel	2466	10	NA	NA	15916	-401	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGCATTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	39640731	39632283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_39634502_39640454_39640539_39640663
tx.26091	chr15	+	1308	5	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_4	22.6315598225133	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCCAGAATAAATCTGTA	NA	False	NA	NA	False	NA	NA	NA	41210828	41230533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_+_41210883_41214473_41214592_41222277_41222360_41222809_41223059_41229728
tx.26092	chr15	-	457	2	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTGTGCAAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	47033332	47022207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_47022513_47033180
tx.26093	chr15	-	9429	6	NIC	ENSMUSG00000038679.17	novel	9859	6	NA	NA	10	-452	intron_retention	FALSE	canonical	2	3	junction_5	7.63151361133557	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTATCCATGACGGCTTT	9556	False	NA	NA	False	NA	NA	NA	50753849	50518599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50753739
tx.26094	chr15	-	2443	2	Antisense	novelGene_ENSMUSG00000068522.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATACTGAGTGGAGC	NA	False	NA	NA	False	NA	NA	NA	51904059	51901530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_51902823_51902908
tx.26095	chr15	+	2771	4	FSM	ENSMUSG00000024479.4	ENSMUST00000025356.4	2950	4	174	5	174	-5	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGGGTCACTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	54434761	54466238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_54435034_54451709_54451881_54461806_54461963_54464066
tx.26096	chr15	+	716	2	Antisense	novelGene_ENSMUSG00000022358.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATATGTTCCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	58024816	58048285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_+_58025072_58047824
tx.26097	chr15	+	737	2	Antisense	novelGene_ENSMUSG00000022358.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATGTAATGAAAATT	NA	False	NA	NA	False	NA	NA	NA	58024849	58048321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_+_58025072_58047806
tx.26098	chr15	-	4004	8	ISM	ENSMUSG00000022353.11	ENSMUST00000226393.2	2062	9	253	-2011	-115	3	3prime_fragment	FALSE	canonical	3	49	junction_1	10.0203873810001	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTCTCCTTCAGATTG	NA	False	NA	NA	False	NA	NA	NA	58828436	58813079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281
tx.26099	chr15	-	897	2	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTCATTCAACAAACGCT	5510	False	NA	NA	False	NA	NA	NA	59520071	59519024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_59519653_59519802
tx.261	chr1	-	4172	8	ISM	ENSMUSG00000026103.15	ENSMUST00000155587.8	3252	10	11336	0	-391	0	3prime_fragment	FALSE	canonical	3	24	junction_1	71.7933542487445	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	52240032	52224438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013
tx.2610	chr11	+	3915	4	FSM	ENSMUSG00000046311.14	ENSMUST00000109198.8	3872	4	189	-232	-4	-24	multi-exon	FALSE	canonical	3	79	junction_1	17.4547032821147	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1355	False	NA	NA	False	NA	NA	NA	49094307	49109612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105890
tx.26100	chr15	+	2297	2	FSM	ENSMUSG00000022346.18	ENSMUST00000160009.2	1765	2	-425	-107	-37	10	multi-exon	FALSE	canonical	3	22	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGGGCCAACTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	61858845	61862209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_61860128_61861194
tx.26101	chr15	+	2792	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	7.7817450199525	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGTGATTTTTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	61909875	62122828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
tx.26102	chr15	-	6013	29	NNC	ENSMUSG00000022377.17	novel	4314	30	NA	NA	-177	0	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_28	26.6221673783028	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCTGACATCAGGCCA	NA	False	NA	NA	False	NA	NA	NA	64184699	63958705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64184616
tx.26108	chr15	+	863	4	NNC	ENSMUSG00000022583.13	novel	877	4	NA	NA	-22	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.74165738677394	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCAGTCAAGATCTCAG	NA	False	NA	NA	False	NA	NA	NA	75140247	75144078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_75140299_75140550_75140649_75141628_75141746_75143481
tx.26109	chr15	+	2473	10	NIC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-68	-2	intron_retention	FALSE	canonical	3	31	junction_2	6.87992248018343	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGTTGAGGGGTAC	NA	False	NA	NA	False	NA	NA	NA	75734107	75739255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_75734331_75735253_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
tx.2611	chr11	+	4000	5	FSM	ENSMUSG00000046311.14	ENSMUST00000109197.8	4029	5	-5	34	-5	-27	multi-exon	FALSE	canonical	1	1	junction_3	50.6310181608073	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTGTGACTTGTTT	1367	False	NA	NA	False	NA	NA	NA	49094319	49109609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105381_49105482_49105890
tx.26110	chr15	-	1980	2	FSM	ENSMUSG00000098176.3	ENSMUST00000183130.3	2458	2	477	1	477	-1	multi-exon	FALSE	canonical	3	5	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCGTTGTCTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	75853814	75851721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75853537_75853649
tx.26112	chr15	+	2440	7	NIC	ENSMUSG00000022553.17	novel	1686	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	633	junction_2	18.2094297915485	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	76235511	76238573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
tx.26114	chr15	+	3430	18	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	25	-1	intron_retention	FALSE	canonical	2	7	junction_1	4.29613167917887	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5035	False	NA	NA	False	NA	NA	NA	76544082	76552394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
tx.26115	chr15	+	2401	4	NIC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	48.3206880009887	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTGTTGCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	76594833	76599291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76595284_76597066_76597421_76597600_76598186_76598279
tx.26116	chr15	-	4621	3	FSM	ENSMUSG00000022526.9	ENSMUST00000229494.2	2855	3	-43	-1723	-25	322	multi-exon	FALSE	canonical	3	20	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTAGTTTGTGTGGAAG	NA	False	NA	NA	False	NA	NA	NA	76755660	76735486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76738815_76754006_76754121_76754481
tx.26117	chr15	-	5806	9	NNC	ENSMUSG00000033565.19	novel	6573	13	NA	NA	-14573	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	64.6799814471216	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	NA	False	NA	NA	NA	76988473	76963190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76988426
tx.26119	chr15	+	1685	3	ISM	ENSMUSG00000075555.13	ENSMUST00000148028.2	905	4	-249	0	-249	0	intron_retention	FALSE	canonical	2	3	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGCTTCAGTGTTGTA	3643	False	NA	NA	False	NA	NA	NA	79093261	79101583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_79093614_79094390_79094450_79100309
tx.2612	chr11	+	3111	4	FSM	ENSMUSG00000020346.17	ENSMUST00000167400.8	3151	4	45	-5	-10	0	multi-exon	TRUE	canonical	2	7	junction_1	35.4432253360529	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	49135062	49153854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49135167_49136019_49136445_49142376_49142502_49151397
tx.26120	chr15	-	3392	5	Antisense	novelGene_ENSMUSG00000022428.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	1.4790199457749	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACTCTGTGCACCAT	NA	False	NA	NA	False	NA	NA	NA	79555025	79547297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_79550076_79550564_79550733_79550981_79551216_79553713_79553831_79554930
tx.26121	chr15	-	7800	4	FSM	ENSMUSG00000089715.13	ENSMUST00000129614.2	576	4	-57	-7167	-6	22	multi-exon	FALSE	canonical	3	140	junction_1	9.89949493661167	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	79718532	79710278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79717780_79717902_79717969_79718115_79718160_79718343
tx.26122	chr15	+	3894	10	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	8	-3	intron_retention	FALSE	canonical	3	54	junction_1	6.47120879047157	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCATCTTGTCTAT	5001	False	NA	NA	False	NA	NA	NA	80017335	80045905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_80017390_80032427_80032565_80032887_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
tx.26123	chr15	+	3274	10	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	13	0	intron_retention	FALSE	canonical	3	51	junction_2	7.6594168620507	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCATCTTGTCTATCTG	5006	False	NA	NA	False	NA	NA	NA	80017340	80045908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_80017390_80032427_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
tx.26124	chr15	-	2701	6	NNC	ENSMUSG00000050439.8	novel	2236	7	NA	NA	-1	-20607	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.24961536185438	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTTTGTTTTGTCCTC	NA	False	NA	NA	False	NA	NA	NA	80449358	80357047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_80358675_80393382_80393510_80398262_80398382_80418714_80418949_80444204_80444702_80449261
tx.26125	chr15	+	1857	4	ISM	ENSMUSG00000022408.8	ENSMUST00000023044.7	2993	5	11	7478	11	-7478	5prime_fragment	FALSE	canonical	0	0	junction_2	0.942809041582063	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCCACCTTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	80556058	80577148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_80556589_80574117_80574286_80574733_80574856_80576111
tx.26126	chr15	+	5866	22	NIC	ENSMUSG00000047888.11	novel	5215	18	NA	NA	-49	-198	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	5.61985466359312	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCACTTTTTTCATGT	NA	False	NA	NA	False	NA	NA	NA	80682793	80814011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
tx.26127	chr15	+	2698	2	Antisense	novelGene_ENSMUSG00000022403.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	4	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGGCATTTTAAAAAG	8818	False	NA	NA	False	NA	NA	NA	81268086	81270980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_+_81268450_81268645
tx.26128	chr15	-	2579	3	Antisense	novelGene_ENSMUSG00000061848.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGCTTTGCATTGTT	5698	False	NA	NA	False	NA	NA	NA	81859929	81854970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_81857092_81859315_81859496_81859651
tx.26129	chr15	+	776	3	NIC	ENSMUSG00000100199.2	novel	1118	4	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTGTGGTCCTATGA	NA	False	NA	NA	False	NA	NA	NA	82783265	82790016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_82783470_82785916_82786016_82789543
tx.2613	chr11	+	2749	3	FSM	ENSMUSG00000020346.17	ENSMUST00000156607.8	633	3	220	-2336	220	0	multi-exon	FALSE	canonical	3	30	junction_1	30.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	49136277	49153854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49136445_49142376_49142502_49151397
tx.26130	chr15	+	2565	11	FSM	ENSMUSG00000058586.13	ENSMUST00000166427.8	2577	11	10	2	10	1	multi-exon	FALSE	canonical	3	56	junction_1	10.3169763012231	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCCAAGTGGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	82984504	83000873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
tx.26131	chr15	+	3101	10	NNC	ENSMUSG00000041653.6	novel	1313	8	NA	NA	-43	2276	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	16.9341498782421	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATGTATTCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	84051994	84073713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84070603_84070721_84071960
tx.26133	chr15	-	1048	5	FSM	ENSMUSG00000064284.13	ENSMUST00000144067.8	761	5	-15	-272	0	0	multi-exon	FALSE	canonical	3	18	junction_4	131.723906334424	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8123	False	NA	NA	False	NA	NA	NA	85695860	85691172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695751
tx.26134	chr15	-	3124	3	ISM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	38	2	1	-2	intron_retention	FALSE	canonical	3	301	junction_1	24.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8124	False	NA	NA	False	NA	NA	NA	85695859	85691174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_85691740_85692456_85692569_85693412
tx.26135	chr15	-	11410	34	NIC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	125	0	intron_retention	FALSE	canonical	3	21	junction_33	10.2925079958585	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGCTGTGCTGGGTGG	NA	False	NA	NA	False	NA	NA	NA	85918279	85783130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
tx.26136	chr15	+	4942	18	NIC	ENSMUSG00000035900.19	novel	4861	18	NA	NA	24	3	intron_retention	FALSE	canonical	3	47	junction_12	7.07106781186548	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTCTGAGGAATCCTT	NA	False	NA	NA	False	NA	NA	NA	85942951	86021822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017961_86019081_86019151_86019550
tx.26137	chr15	+	3898	18	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-51	6	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	15.2696637080777	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGAGGAATCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	85943021	86021825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_85943163_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
tx.26138	chr15	-	1204	2	FSM	ENSMUSG00000093394.2	ENSMUST00000176338.2	485	2	16	-735	16	2	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAATGTGTGACAGTTT	NA	False	NA	NA	False	NA	NA	NA	88775670	88773980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_88775099_88775584
tx.26139	chr15	+	2504	9	NIC	ENSMUSG00000015363.14	novel	2439	10	NA	NA	10	2	intron_retention	FALSE	canonical	3	86	junction_1	6.36396103067893	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGCTTTGTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	88960225	88971276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969841_88969958
tx.2614	chr11	+	2596	2	ISM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	1233	0	248	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	49136305	49153854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_49136445_49151397
tx.26140	chr15	+	2932	10	FSM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	-53	-938	-1	0	multi-exon	FALSE	canonical	2	4	junction_1	29.3749704491577	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCCGCTTTGTGAAGT	NA	False	NA	NA	False	NA	NA	NA	88960273	88971274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_88960902_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
tx.26141	chr15	-	2015	11	NIC	ENSMUSG00000022610.11	novel	1808	12	NA	NA	-56	0	intron_retention	FALSE	canonical	2	7	junction_4	1.96214168703486	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTGGCCCCAT	NA	False	NA	NA	False	NA	NA	NA	89024962	89014786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_89015422_89016697_89016872_89016955_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
tx.26142	chr15	-	2610	11	NIC	ENSMUSG00000053137.8	novel	2461	12	NA	NA	51	0	intron_retention	FALSE	canonical	2	7	junction_7	5.91692487699481	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTCTGGATCCCATT	NA	False	NA	NA	False	NA	NA	NA	89033780	89026688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
tx.26143	chr15	-	3268	3	ISM	ENSMUSG00000015377.11	ENSMUST00000229416.2	1969	12	3160	-2572	3160	-23	intron_retention	FALSE	canonical	3	87	junction_2	14	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAATATCTTTTTTTGT	6035	False	NA	NA	False	NA	NA	NA	89069887	89066442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_89069313_89069394_89069470_89069564
tx.26144	chr15	-	334	2	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAATCCCTTAATCTGTT	NA	False	NA	NA	False	NA	NA	NA	91518680	91515986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_91516176_91518535
tx.26145	chr15	-	1765	4	ISM	ENSMUSG00000022634.10	ENSMUST00000133736.2	1870	5	395	1	268	-1	3prime_fragment	FALSE	canonical	3	44	junction_2	51.0163372525573	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTTGCATTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	93234421	93182162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_93183504_93184290_93184444_93215419_93215490_93234220
tx.26147	chr15	+	6091	20	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-433	12137	-378	-10746	5prime_fragment	FALSE	canonical	3	74	junction_13	17.1540195817667	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAACAAGCCTTAAACT	NA	False	NA	NA	False	NA	NA	NA	96185020	96290736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453
tx.26148	chr15	-	635	4	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	11	junction_1	2.62466929133727	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGTTTCTAGAATTTG	1464	False	NA	NA	False	NA	NA	NA	97029749	97026298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_97026566_97026963_97027102_97029108_97029265_97029675
tx.26149	chr15	+	2453	3	NNC	ENSMUSG00000081534.4	novel	2536	3	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	69.5	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTTTTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	97682271	97690573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_97682498_97687830_97687952_97688467
tx.2615	chr11	+	2685	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	41	3	-12	0	multi-exon	FALSE	canonical	3	40	junction_1	25.5	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	49141379	49153854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49141483_49142376_49142502_49151397
tx.26150	chr15	-	6948	20	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	25	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	66.9712387103929	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAACTCCCTGGACTCA	6432	False	NA	NA	False	NA	NA	NA	97991161	97936631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97990528
tx.26151	chr15	+	3048	2	NNC	ENSMUSG00000097414.3	novel	411	2	NA	NA	-189	259	intron_retention	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATGATTTATTTTAACA	2783	False	NA	NA	False	NA	NA	NA	98711019	98714217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_98712817_98712966
tx.26152	chr15	-	3422	2	ISM	ENSMUSG00000023755.11	ENSMUST00000229348.2	1069	8	-81	3	-23	-3	intron_retention	FALSE	canonical	3	177	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTTTGTGTCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	98779238	98775661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_98776179_98776333
tx.26153	chr15	-	2283	15	NIC	ENSMUSG00000022999.16	novel	2304	17	NA	NA	13	0	intron_retention	FALSE	canonical	3	43	junction_7	10.3275439125334	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTCCCTGTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	98815923	98801797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
tx.26154	chr15	-	3797	13	NIC	ENSMUSG00000022999.16	novel	2304	17	NA	NA	-41	1	intron_retention	FALSE	canonical	3	43	junction_5	11.0939798489491	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCTTGTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	98815977	98801800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_98802390_98802545_98802708_98803796_98805492_98805774_98805853_98806400_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
tx.26155	chr15	+	935	6	ISM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	1673	-3	884	-1	3prime_fragment	FALSE	canonical	3	19	junction_5	5.95315042645489	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGTGTTGGTCTGAGG	978	False	NA	NA	False	NA	NA	NA	98954734	98956857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
tx.26156	chr15	+	5702	12	NIC	ENSMUSG00000037579.8	novel	3698	15	NA	NA	-297	8	intron_retention	FALSE	canonical	3	10	junction_1	5.67435873975536	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGAAGCTACTTTGG	NA	False	NA	NA	False	NA	NA	NA	99122444	99140685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_99122933_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99127098_99127186_99127395_99130573_99130886_99131129_99131998_99135955_99136174_99137475_99138875_99139630_99139708_99139800
tx.26157	chr15	+	6043	7	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-1083	0	intron_retention	FALSE	canonical	3	50	junction_5	4.6785562825394	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTTTAATTCTTAAAC	NA	False	NA	NA	False	NA	NA	NA	100099933	100117354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
tx.26158	chr15	+	4793	6	ISM	ENSMUSG00000023026.17	ENSMUST00000023768.14	4320	33	50688	-3808	1948	1	3prime_fragment	FALSE	canonical	3	50	junction_4	5.11468474101777	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTAATTCTTAAACC	NA	False	NA	NA	False	NA	NA	NA	100102964	100117355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
tx.26159	chr15	-	4840	16	NNC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	-20	469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	46.9039680861036	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACCGAAGTCACTTAG	NA	False	NA	NA	False	NA	NA	NA	100320903	100289974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301781_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
tx.2616	chr11	+	2730	3	NNC	ENSMUSG00000020346.17	novel	3151	4	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	42.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	49141485	49153854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_49141634_49142376_49142502_49151397
tx.26160	chr15	-	6050	14	NIC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	-18	-95	intron_retention	FALSE	canonical	3	140	junction_13	18.2614153323566	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTTTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	100320901	100290538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
tx.26161	chr15	+	3436	9	ISM	ENSMUSG00000000530.17	ENSMUST00000120754.2	3506	10	478	1	478	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0.82915619758885	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGCTGCCTTCCAGG	NA	False	NA	NA	False	NA	NA	NA	101032491	101043216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_101032625_101033178_101033425_101033629_101033842_101034008_101034109_101034864_101035012_101035244_101035521_101036088_101036287_101038947_101039079_101041223
tx.26162	chr15	+	2607	10	NNC	ENSMUSG00000000532.12	novel	4418	9	NA	NA	48	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.78204970278119	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCTCTGATCCCGTC	NA	False	NA	NA	False	NA	NA	NA	101071995	101111559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617_101109284_101111040
tx.26163	chr15	+	3880	6	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	38	1323	intron_retention	FALSE	canonical	3	148	junction_1	37.0869249197072	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCCGTAATAGCAGATAA	6279	False	NA	NA	False	NA	NA	NA	101122106	101131960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128673_101128865
tx.26164	chr15	-	168	2	Antisense	novelGene_ENSMUSG00000058655.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATAGTCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	101987391	101985581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_101985731_101987372
tx.26165	chr15	+	2331	11	NNC	ENSMUSG00000022489.7	novel	923	3	NA	NA	-1097	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.31268564083465	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGTGGTGTTCATTA	NA	False	NA	NA	False	NA	NA	NA	103431047	103438481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_103431102_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
tx.26166	chr16	+	1916	2	ISM	ENSMUSG00000054939.7	ENSMUST00000041778.8	5897	3	-44	8665	-44	-8665	5prime_fragment	FALSE	canonical	3	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGCTCTGTGGGTAAAG	NA	False	NA	NA	False	NA	NA	NA	3665087	3668079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_3666139_3667214
tx.26167	chr16	-	6610	14	ISM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	105783	3	-12088	-3	3prime_fragment	FALSE	canonical	3	34	junction_9	9.64395754655542	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGGTTCCGATTGGCT	3144	False	NA	NA	False	NA	NA	NA	3926078	3899194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899
tx.26168	chr16	-	5239	28	ISM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	207	10523	207	-12	5prime_fragment	FALSE	canonical	3	32	junction_27	7.60459755529851	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAGAAGAAGAAGAAAGG	6219	False	NA	NA	False	NA	NA	NA	4031654	3909714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
tx.26169	chr16	+	4086	3	Antisense	novelGene_ENSMUSG00000005580.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCCCGGAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	4095655	4108765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr16_+_4096071_4103311_4103633_4105415
tx.2617	chr11	-	5736	11	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-4	10	intron_retention	TRUE	canonical	1	1	junction_9	65.2637724928616	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGTTTGTACAGCTCTA	NA	False	NA	NA	False	NA	NA	NA	49603541	49562319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580086_49593367_49593482_49603180
tx.26171	chr16	+	4873	13	NNC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	-5	7112	intron_retention	FALSE	canonical	0	0	junction_12	56.3404211517411	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCACTGAGCCTTGTT	1292	False	NA	NA	False	NA	NA	NA	5051496	5069888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5066295
tx.26172	chr16	-	3967	7	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	12	1024	intron_retention	FALSE	canonical	0	0	junction_6	4.60675832036175	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTGGTGCGTGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	10265214	10237396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10264793_10264874_10265088
tx.26173	chr16	-	3172	6	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	-6	-4	intron_retention	FALSE	canonical	1	2	junction_5	3.84707681233427	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTATTTCTCATAG	NA	False	NA	NA	False	NA	NA	NA	10265232	10238424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10264793
tx.26174	chr16	+	8942	19	NNC	ENSMUSG00000022504.11	novel	4237	19	NA	NA	-71	2645	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.37997137204158	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCTTTGGTGTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	10297851	10348927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_10298291_10319630_10319778_10319999_10320096_10321529_10321593_10321733_10321812_10324059_10324105_10324553_10324689_10326429_10326595_10327220_10327287_10328567_10330219_10330992_10331152_10332300_10332373_10335551_10335633_10336157_10336251_10338831_10338919_10341582_10341667_10341776_10341861_10343030_10343128_10343627
tx.26175	chr16	+	3440	9	ISM	ENSMUSG00000022504.11	ENSMUST00000023147.8	6007	19	24822	0	23318	0	3prime_fragment	FALSE	canonical	0	0	junction_7	1.4790199457749	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGTTCTCAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	10330964	10346282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_10331152_10332300_10332373_10335551_10335633_10336157_10336251_10338831_10338919_10341582_10341667_10341776_10341861_10343030_10343128_10343627
tx.26176	chr16	+	6316	21	NIC	ENSMUSG00000071669.15	novel	2667	21	NA	NA	-23	3623	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	3.01827765455731	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTCTTCTCTGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	11140748	11576959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_11140843_11165722_11165785_11167769_11167823_11185540_11185666_11213082_11213264_11217628_11217700_11218664_11218914_11221323_11221697_11231089_11231221_11236686_11236763_11238564_11238648_11263028_11263093_11265243_11265373_11328823_11328907_11389562_11389670_11449321_11449439_11473999_11474056_11478409_11478492_11532777_11532919_11556157_11556298_11573060
tx.26177	chr16	+	4382	6	ISM	ENSMUSG00000071669.15	ENSMUST00000096273.9	1622	14	225864	-3624	184204	3624	3prime_fragment	FALSE	canonical	1	4	junction_3	2.92574776766556	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTTCTCTGTGGTTCC	2066	False	NA	NA	False	NA	NA	NA	11449375	11576960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_11449439_11473999_11474056_11478409_11478492_11532777_11532919_11556157_11556298_11573060
tx.26178	chr16	+	5035	2	ISM	ENSMUSG00000022545.14	ENSMUST00000129049.2	5130	10	28894	1883	8297	0	3prime_fragment	FALSE	canonical	3	66	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	12958551	12966598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_12962378_12965389
tx.26179	chr16	-	796	3	NIC	ENSMUSG00000022683.14	novel	1423	4	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	25	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	NA	False	NA	NA	False	NA	NA	NA	13548369	13532920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_13533461_13542972_13543080_13548220
tx.2618	chr11	-	4616	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-3	-1030	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	72.4097614532668	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCAGTGTTCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	49603553	49563359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580086_49593367_49593482_49603180
tx.26180	chr16	-	3777	24	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	24	6	at_least_one_novel_splicesite	TRUE	canonical	3	58	junction_22	39.8562160573743	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTGTCTCTGAACATT	9722	False	NA	NA	False	NA	NA	NA	13720967	13651435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702493_13705560_13705635_13720778
tx.26181	chr16	+	3039	4	FSM	ENSMUSG00000022679.14	ENSMUST00000141971.8	2155	4	5	-889	5	-7	multi-exon	FALSE	canonical	2	14	junction_1	85.9353762363841	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	461	False	NA	NA	False	NA	NA	NA	13758498	13767476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13758576_13762529_13762601_13764421_13764452_13764615
tx.26182	chr16	-	4836	14	ISM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	26479	0	9752	0	3prime_fragment	FALSE	canonical	3	21	junction_8	9.70755820948463	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAATGAGTGCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	13950652	13927036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433
tx.26183	chr16	-	5428	3	FSM	ENSMUSG00000022768.18	ENSMUST00000115711.10	2103	3	-3325	0	-493	0	multi-exon	FALSE	canonical	1	1	junction_2	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTCTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	16965586	16958899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_16960067_16960194_16960744_16961874
tx.26184	chr16	-	1127	5	FSM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	-17	0	-9	0	multi-exon	FALSE	canonical	3	10	junction_4	41.2757495389242	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7258	False	NA	NA	False	NA	NA	NA	17348928	17345941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348841
tx.26185	chr16	+	2333	4	FSM	ENSMUSG00000041617.11	ENSMUST00000182822.8	1040	4	30	-1323	25	0	multi-exon	FALSE	canonical	2	5	junction_2	1.88561808316413	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAAGCTTCCTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	17464363	17468602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17464648_17465471_17465517_17465930_17465991_17466658
tx.26186	chr16	+	3387	11	FSM	ENSMUSG00000012017.5	ENSMUST00000012161.5	3308	11	-79	0	-79	0	multi-exon	FALSE	canonical	1	1	junction_2	2.53968501984006	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTGCTCTAATTACT	NA	False	NA	NA	False	NA	NA	NA	17615066	17626157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17615392_17620230_17620290_17620379_17620482_17620643_17621164_17621245_17621465_17621600_17621730_17622169_17622274_17622349_17622468_17622672_17622789_17624212_17624366_17624615
tx.26187	chr16	+	2087	2	ISM	ENSMUSG00000012017.5	ENSMUST00000231383.2	2641	5	1380	0	-27	0	intron_retention	FALSE	canonical	3	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCAGTGCTCTAATTAC	3106	False	NA	NA	False	NA	NA	NA	17622645	17626156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_17622789_17624212
tx.26188	chr16	+	6934	3	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	-4623	1	intron_retention	FALSE	canonical	3	284	junction_1	28.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAGACTTGATTTGTCCA	2101	False	NA	NA	False	NA	NA	NA	18362869	18385430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_18366942_18371116_18371333_18382784
tx.26189	chr16	-	1858	7	FSM	ENSMUSG00000009097.11	ENSMUST00000232335.2	2511	7	-78	731	-78	-6	multi-exon	FALSE	canonical	1	1	junction_4	1.7950549357115	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGTGTGGCTATTCTT	7662	False	NA	NA	False	NA	NA	NA	18405797	18400459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_18401207_18401473_18401575_18401656_18401725_18402168_18402325_18402833_18403006_18403784_18403887_18405285
tx.2619	chr11	-	5722	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-17	-3207	-4	-3	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAAGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	49603554	49562332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
tx.26191	chr16	+	8889	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	4	-3578	intron_retention	FALSE	canonical	3	70	junction_1	10.9658560997307	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGAATCCTAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	19916316	19944393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
tx.26192	chr16	-	1433	4	NNC	ENSMUSG00000116831.2	novel	1769	4	NA	NA	-11	10402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.0184900284226	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCAAGTCAATTTTACT	NA	False	NA	NA	False	NA	NA	NA	22713147	22683330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_22683591_22684245_22685246_22705778_22705854_22713049
tx.26193	chr16	+	6802	10	ISM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	16791	5	15692	-5	3prime_fragment	FALSE	canonical	3	85	junction_5	13.1806067789661	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATGATGGCCTACTGTT	NA	False	NA	NA	False	NA	NA	NA	27224409	27270963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
tx.26194	chr16	+	5760	3	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGATGGTATGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	29499462	29524142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_+_29499657_29502415_29502511_29518671
tx.26195	chr16	+	2727	5	NIC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	-1048	0	intron_retention	FALSE	canonical	3	11	junction_1	339.26344851752	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	False	NA	NA	False	NA	NA	NA	29882153	29886614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_29883608_29884352_29884517_29884648_29884745_29884980_29885069_29885689
tx.26196	chr16	-	4996	6	ISM	ENSMUSG00000022537.19	ENSMUST00000089775.11	4331	12	8249	2	1176	-2	3prime_fragment	FALSE	canonical	3	13	junction_1	5.42586398650021	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGGTTTATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	30361139	30330674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556
tx.26197	chr16	+	5054	14	FSM	ENSMUSG00000022791.20	ENSMUST00000115125.8	4313	14	-741	0	28	0	multi-exon	FALSE	canonical	3	16	junction_12	42.5358880846272	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	32462719	32502311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499969_32500098_32501502
tx.26198	chr16	+	7442	9	NIC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-33	-2403	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	48.1371737849243	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTACTTGTCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	33201466	33322330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_33201674_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
tx.26199	chr16	-	3089	2	Antisense	novelGene_ENSMUSG00000022811.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33207722	33204420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr16_-_33206233_33206445
tx.262	chr1	-	3638	8	FSM	ENSMUSG00000002881.15	ENSMUST00000069792.14	3874	8	236	0	-128	0	multi-exon	FALSE	canonical	3	26	junction_5	3.6922422809486	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTTAGAGTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	52539602	52496452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_52498466_52501246_52501364_52503943_52504107_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
tx.2620	chr11	-	5837	11	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-8	1	intron_retention	FALSE	canonical	3	170	junction_10	17.8440466262561	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAAGTGTAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	49603558	49562328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
tx.26200	chr16	+	3754	9	NIC	ENSMUSG00000075254.13	novel	6714	17	NA	NA	33	-8192	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.91910385164772	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTCAGAGTGTTTATC	6952	False	NA	NA	False	NA	NA	NA	33504868	33552449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_33505226_33527285_33527577_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968
tx.26201	chr16	-	3783	4	ISM	ENSMUSG00000022838.15	ENSMUST00000114829.9	1030	6	-24	11101	-24	-11020	5prime_fragment	FALSE	canonical	2	12	junction_2	0.942809041582063	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8176	False	NA	NA	False	NA	NA	NA	36648647	36625206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_36628523_36630833_36630971_36645019_36645115_36648412
tx.26202	chr16	+	4271	4	ISM	ENSMUSG00000034206.16	ENSMUST00000071452.12	7290	25	-22	74130	-22	3272	5prime_fragment	FALSE	canonical	3	20	junction_3	9.03081145609604	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAAATCTACAATTTAC	3726	False	NA	NA	False	NA	NA	NA	36832125	36841224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_36832422_36833468_36833649_36835440_36835572_36837560
tx.26203	chr16	-	2107	9	FSM	ENSMUSG00000022805.18	ENSMUST00000114740.3	2529	9	-55	477	-55	-477	multi-exon	FALSE	canonical	0	0	junction_4	3.3166247903554	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	38162229	38143019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_38144022_38144498_38144657_38148569_38148748_38152529_38152712_38153115_38153173_38154103_38154188_38155865_38156024_38156705_38156783_38162018
tx.26204	chr16	-	6049	12	Fusion	ENSMUSG00000002846.10_ENSMUSG00000034064.15	novel	2758	11	NA	NA	-2	3864	multi-exon	FALSE	canonical	0	0	junction_1	288.946075783603	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGGCAGACTTGTATT	6264	False	NA	NA	False	NA	NA	NA	38370586	38341634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr16_-_38344603_38345141_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
tx.26205	chr16	-	3210	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	52.4541466425677	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43710043	43681769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701191_43701577_43709929
tx.26206	chr16	+	3338	6	NIC	ENSMUSG00000022701.19	novel	2310	10	NA	NA	5279	-603	intron_retention	FALSE	canonical	3	56	junction_1	14.3749782608531	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACGGAGGGGGCGTCCTT	2710	False	NA	NA	False	NA	NA	NA	43764765	43784074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
tx.26207	chr16	+	5700	2	ISM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	8880	-2514	6062	2514	3prime_fragment	FALSE	canonical	3	64	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTTTTTATCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	44553543	44560161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_44555161_44556078
tx.26208	chr16	-	3510	6	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	40.3187301387333	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	44566709	44557130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565645_44565857_44566361
tx.26209	chr16	-	6857	2	NIC	ENSMUSG00000022668.11	novel	583	3	NA	NA	11	155	intron_retention	FALSE	canonical	3	112	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTCTACTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	44566711	44559349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_44565857_44566361
tx.2621	chr11	-	5739	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	-8	5	-8	-5	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATATTTTAAAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	49603558	49562334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
tx.26210	chr16	-	2807	5	NIC	ENSMUSG00000022656.16	novel	3062	6	NA	NA	-34	8	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	101.921538449927	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGGGTTTATTTTGT	NA	False	NA	NA	False	NA	NA	NA	46317364	46267523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_46269332_46274986_46275139_46278476_46278595_46284180_46284523_46316977
tx.26211	chr16	+	1902	8	NIC	ENSMUSG00000055447.20	novel	5250	10	NA	NA	1	655	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	27.9335947254505	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAAAAAAAATCTACA	NA	False	NA	NA	False	NA	NA	NA	49675996	49732109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49731231
tx.26212	chr16	+	1961	10	NIC	ENSMUSG00000055447.20	novel	1358	11	NA	NA	1	669	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	22.7107414625278	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	49676008	49732123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49731231
tx.26213	chr16	-	2900	6	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-106	-3244	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	2.24499443206436	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGTATTTCTTGACTT	NA	False	NA	NA	False	NA	NA	NA	55715754	55663559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158_55686914_55710944_55711175_55715650
tx.26214	chr16	+	3141	5	ISM	ENSMUSG00000052917.16	ENSMUST00000201011.2	914	6	-62	5	-6	-5	intron_retention	FALSE	canonical	3	20	junction_2	8.76070773396762	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAACTCCTTGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	55895780	55946778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141
tx.26215	chr16	-	2845	7	ISM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	11	3790	11	-3134	5prime_fragment	FALSE	canonical	3	88	junction_4	10.7341614587364	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTGAAAGACTTGGTAA	NA	False	NA	NA	False	NA	NA	NA	59459519	59437101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
tx.26216	chr16	-	3682	2	ISM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	2101	1313	2101	-1313	3prime_fragment	FALSE	canonical	3	170	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTTAAGGTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	64589423	64583811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_64587357_64589286
tx.26217	chr16	+	2874	18	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	55.1537642982143	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTTTATTAGAGT	NA	False	NA	NA	False	NA	NA	NA	87251912	87280399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
tx.26218	chr16	-	6714	9	ISM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	35794	-4430	-1415	1055	3prime_fragment	FALSE	canonical	3	105	junction_2	48.8925799585172	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAATCACTTTAAGA	6846	False	NA	NA	False	NA	NA	NA	90045519	90021512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400
tx.26219	chr16	-	6836	29	NIC	ENSMUSG00000022973.19	novel	6910	33	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	16.4673455477121	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCTGACTTCTTTACTC	2353	False	NA	NA	False	NA	NA	NA	90808044	90732988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90744953_90745002_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
tx.2622	chr11	-	4793	12	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	-7	-842	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	63.2697230216766	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGGTATAGTATAAACT	NA	False	NA	NA	False	NA	NA	NA	49603557	49563171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580086_49593367_49593482_49603180
tx.26220	chr16	-	2660	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-164	872	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	34	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGCCTGAGTGGGCTCC	6407	False	NA	NA	False	NA	NA	NA	93591953	93588151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_93590208_93590397_93590505_93591456
tx.26222	chr16	+	5261	12	NNC	ENSMUSG00000022897.16	novel	2561	4	NA	NA	-331	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	49.4577204863152	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGGTTTTTAAAATGG	NA	False	NA	NA	False	NA	NA	NA	94370537	94495923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_94370568_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
tx.26223	chr17	+	5574	26	NNC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	-275	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.53889854480137	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAAGCATGTATCACAT	NA	False	NA	NA	False	NA	NA	NA	6025585	6089666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_6025706_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
tx.26224	chr17	-	5416	15	NIC	ENSMUSG00000015659.13	novel	2033	16	NA	NA	0	1627	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	27.5596755112558	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGTTCAATTCTTAAC	2607	False	NA	NA	False	NA	NA	NA	6130002	6090843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
tx.26225	chr17	-	5528	16	FSM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	0	-3495	0	1625	multi-exon	FALSE	canonical	3	21	junction_12	20.0614611188274	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	2607	False	NA	NA	False	NA	NA	NA	6130002	6090845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
tx.26226	chr17	-	5578	17	NNC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	0	1621	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	20.1397461503367	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCTGGCTTGTTCAATT	2593	False	NA	NA	False	NA	NA	NA	6130016	6090849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102057_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
tx.26227	chr17	+	856	3	NIC	ENSMUSG00000034377.11	novel	3147	2	NA	NA	-17	4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	6	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTTTCCTTAGAGCG	NA	False	NA	NA	False	NA	NA	NA	6157115	6175114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_6157272_6172102_6172620_6174931
tx.26228	chr17	+	3155	2	FSM	ENSMUSG00000034377.11	ENSMUST00000146758.8	3147	2	0	-8	0	8	multi-exon	FALSE	canonical	3	19	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCCTTAGAGCGTATT	NA	False	NA	NA	False	NA	NA	NA	6157132	6175118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_6157272_6172102
tx.26229	chr17	-	3112	4	ISM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	69	2555	-13	-2555	intron_retention	FALSE	canonical	3	5389	junction_3	1056.21725458775	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTTTTTGTGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	6367706	6360823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191
tx.2623	chr11	+	2973	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	-23	-3	-14	3	multi-exon	FALSE	canonical	2	320	junction_10	53.5808204583287	781	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGACTTGTTTGAATTTAG	NA	False	NA	NA	False	NA	NA	NA	49684990	49729443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
tx.26230	chr17	+	2547	3	ISM	ENSMUSG00000062327.11	ENSMUST00000177118.2	761	7	1861	-749	1861	-5	3prime_fragment	FALSE	canonical	3	42	junction_1	1	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	NA	False	NA	NA	NA	8656103	8661323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_8657622_8658741_8658872_8660424
tx.26231	chr17	-	4808	16	ISM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	70414	5	2029	-5	intron_retention	FALSE	canonical	3	174	junction_10	27.3882375401477	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	NA	False	NA	NA	False	NA	NA	NA	12918137	12901297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411
tx.26232	chr17	-	1927	3	NNC	ENSMUSG00000117063.2	novel	2047	5	NA	NA	261017	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTTCCAGACTTCTT	NA	False	NA	NA	False	NA	NA	NA	13720623	13709532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_13711102_13716878_13717048_13720434
tx.26233	chr17	-	1983	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-319	7	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_9	206.573981704752	63	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTAAACATCAAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	15181854	15165263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
tx.26234	chr17	-	4325	9	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-318	2	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_6	238.494758852265	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	NA	False	NA	NA	False	NA	NA	NA	15181853	15167997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
tx.26235	chr17	-	3950	3	NIC	ENSMUSG00000116780.2	novel	712	4	NA	NA	1	49	intron_retention	TRUE	canonical	3	15	junction_1	6.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGCCTCGTGTTAC	NA	False	NA	NA	False	NA	NA	NA	15199051	15184454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_15187964_15190648_15190856_15198817
tx.26236	chr17	-	494	2	Antisense	novelGene_ENSMUSG00000116895.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTTTGGAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	15244505	15233024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_-_15233378_15244364
tx.26237	chr17	+	3393	5	ISM	ENSMUSG00000036552.20	ENSMUST00000226599.2	788	6	-15	-2091	4	388	intron_retention	FALSE	canonical	3	116	junction_1	56.3488021168152	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15261880	15268262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308
tx.26238	chr17	+	2329	5	FSM	ENSMUSG00000023882.16	ENSMUST00000165230.8	2832	5	17	486	11	0	multi-exon	FALSE	canonical	2	4	junction_1	11.7340317027013	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	21643505	21655416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21643824_21647593_21647634_21647998_21648091_21650456_21650584_21653664
tx.26239	chr17	+	2561	5	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	49.3931928508373	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTCTCTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	21670638	21685853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_21670670_21672698_21672790_21676558_21676651_21681922_21682050_21683633
tx.2624	chr11	+	4577	13	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	-7	-318	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	132.897490779757	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTACAGCATGTCCA	NA	False	NA	NA	False	NA	NA	NA	49737590	49776920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_49737803_49745039_49745210_49745563_49745805_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
tx.26240	chr17	-	3098	5	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	33.5484723944325	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22181468	22145945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22172868_22172962_22181236
tx.26241	chr17	-	2530	3	FSM	ENSMUSG00000071267.12	ENSMUST00000126485.2	2481	3	-24	-25	-24	25	multi-exon	FALSE	canonical	3	50	junction_2	18	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAGACAAAACCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	22181469	22158700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_22160832_22172868_22173035_22181236
tx.26242	chr17	-	5349	5	NIC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-13	6	intron_retention	FALSE	canonical	3	51	junction_3	23.0217288664427	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTTTTCAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580394	22556963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_22559089_22559947_22562675_22577803_22577970_22578420_22578506_22580148
tx.26243	chr17	+	6481	3	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-3932	1039	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	1.5	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTTTAGTGGAACTAT	NA	False	NA	NA	False	NA	NA	NA	22902768	22910480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_22906513_22906703_22906831_22907870
tx.26244	chr17	-	6800	8	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-10086	4602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.77664385637157	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAACAAACTGGAATTG	NA	False	NA	NA	False	NA	NA	NA	23036796	22991588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22997582_22998380_22998508_22998876_22998945_23000305_23000363_23001024_23001092_23004787_23004923_23035266_23035358_23036534
tx.26245	chr17	-	2531	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-12	385	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_3	33.9493740737587	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATTGTGGTTGTTGTT	4811	False	NA	NA	False	NA	NA	NA	23805218	23794432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_23796137_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23804934
tx.26246	chr17	+	6114	20	FSM	ENSMUSG00000033597.10	ENSMUST00000024958.9	5938	20	-181	5	1	-2	multi-exon	FALSE	canonical	1	2	junction_16	3.27755736356637	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGCTGCTTGGCTCACA	7671	False	NA	NA	False	NA	NA	NA	24707575	24727640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718144_24718226_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24720308_24721089_24721201_24721290_24721393_24722774_24722914_24722993_24724995_24725496_24725912_24726090
tx.26247	chr17	+	5878	18	FSM	ENSMUSG00000033597.10	ENSMUST00000234717.2	5630	18	-248	0	26	0	multi-exon	FALSE	canonical	1	1	junction_14	3.33483241954315	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGCTTGGCTCACACT	7696	False	NA	NA	False	NA	NA	NA	24707600	24727642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718144_24718226_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24720308_24722774_24722914_24722993_24724995_24725496_24725912_24726090
tx.26248	chr17	-	1883	6	NIC	ENSMUSG00000079657.11	novel	1658	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	65	junction_5	8.88594395660922	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGTCATCTGTGGAA	NA	False	NA	NA	False	NA	NA	NA	24752718	24748038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_24748945_24749028_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
tx.26249	chr17	+	9268	32	ISM	ENSMUSG00000032855.7	ENSMUST00000035565.5	14164	46	23972	2	-2622	-1	3prime_fragment	FALSE	canonical	2	6	junction_7	8.96901824289678	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGCCAGATGTGCGTGT	NA	False	NA	NA	False	NA	NA	NA	24792895	24815480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_24795218_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
tx.2625	chr11	+	4434	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	5	236	5	-226	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	432	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATGTTGAAGTGTCGT	NA	False	NA	NA	False	NA	NA	NA	49737584	49777012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
tx.26250	chr17	+	3866	2	FSM	ENSMUSG00000041429.4	ENSMUST00000234888.2	583	2	-3283	0	2174	0	multi-exon	FALSE	canonical	3	269	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	3119	False	NA	NA	False	NA	NA	NA	24853866	24857810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24857504_24857581
tx.26251	chr17	-	6041	2	Antisense	novelGene_ENSMUSG00000046070.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCATTAGAACATTTG	NA	False	NA	NA	False	NA	NA	NA	25089536	25083386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_-_25086378_25086486
tx.26252	chr17	-	7704	21	FSM	ENSMUSG00000038002.10	ENSMUST00000233774.2	7674	21	-30	0	-30	0	multi-exon	FALSE	canonical	1	1	junction_9	1.96468827043885	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTTTGTGCCTGC	5343	False	NA	NA	False	NA	NA	NA	25234792	25180199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25183921_25187899_25188046_25189388_25189554_25190350_25190583_25191309_25191376_25192054_25192234_25192477_25192583_25193678_25193761_25196305_25196381_25196469_25196652_25198459_25198638_25201197_25202371_25202917_25203000_25203948_25204073_25204495_25204582_25211243_25211293_25213559_25213644_25216426_25216581_25222185_25222380_25232661_25233000_25234503
tx.26253	chr17	-	4385	7	NIC	ENSMUSG00000061046.10	novel	1074	8	NA	NA	3	-5	intron_retention	FALSE	canonical	3	7	junction_6	18.2825052987822	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCTGGGTGTGACAA	4347	False	NA	NA	False	NA	NA	NA	26004553	25998821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004401
tx.26254	chr17	-	2302	4	ISM	ENSMUSG00000061046.10	ENSMUST00000129917.8	1790	5	-243	9	4	3	intron_retention	FALSE	canonical	3	51	junction_2	4.92160768674447	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTCCAGAGGTGCAGG	4348	False	NA	NA	False	NA	NA	NA	26004552	26001772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_26002557_26002758_26002861_26003048_26003547_26003634
tx.26255	chr17	-	6223	2	FSM	ENSMUSG00000057411.10_ENSMUSG00000002274.14	ENSMUST00000237703.2	1528	2	-4695	0	-7	0	multi-exon	FALSE	canonical	3	227	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	5886	False	NA	NA	False	NA	NA	NA	26016064	26009479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26009958_26010319
tx.26256	chr17	-	4558	11	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	45	0	intron_retention	FALSE	canonical	0	0	junction_4	30.5844731849349	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1767	False	NA	NA	False	NA	NA	NA	26204725	26177340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_26178708_26178780_26178960_26179365_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
tx.26257	chr17	-	6531	8	ISM	ENSMUSG00000037098.19	ENSMUST00000148021.3	3333	12	9986	-1	9986	1	3prime_fragment	FALSE	canonical	3	64	junction_5	13.5631553730491	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGAGCCGGCTTCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	26227448	26208014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524
tx.26258	chr17	+	2856	11	NNC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	174.561994718209	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGCTGTGACTCTGC	NA	False	NA	NA	False	NA	NA	NA	26780499	26875905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_26780607_26787638_26787778_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
tx.26259	chr17	+	2407	9	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	9	-247	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	145.142979075806	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACCAGTCCCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	26780500	26875658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_26780607_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
tx.2626	chr11	+	4430	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	11	236	9	-226	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATGTTGAAGTGTCGT	NA	False	NA	NA	False	NA	NA	NA	49737588	49777012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
tx.26260	chr17	-	1529	4	ISM	ENSMUSG00000062753.15	ENSMUST00000145183.3	992	5	-40	-3	1	3	intron_retention	FALSE	canonical	3	245	junction_2	9.7410927974683	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGGGTGGACTCC	NA	False	NA	NA	False	NA	NA	NA	27784681	27782739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535
tx.26261	chr17	+	4106	10	FSM	ENSMUSG00000040276.16	ENSMUST00000045896.11	4176	10	18	52	18	-52	multi-exon	TRUE	canonical	0	0	junction_1	19.6078845315467	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTATCAGTTGTGACC	NA	False	NA	NA	False	NA	NA	NA	27874539	27930033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27874734_27920799_27920916_27921673_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
tx.26262	chr17	+	3415	6	ISM	ENSMUSG00000040276.16	ENSMUST00000231350.2	1368	8	1166	-2377	-26	-42	3prime_fragment	FALSE	canonical	3	35	junction_1	8.46167832052247	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGACCGTATGGCTGT	NA	False	NA	NA	False	NA	NA	NA	27924596	27930043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
tx.26263	chr17	+	6882	21	NIC	ENSMUSG00000038677.15	novel	6876	22	NA	NA	-169	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	8.34805366537614	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTAGCAAGCATCCTTT	NA	False	NA	NA	False	NA	NA	NA	28360945	28393827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
tx.26264	chr17	-	2557	12	NIC	ENSMUSG00000002249.22	novel	2585	13	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	2.83717936987768	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCCATATGCAA	NA	False	NA	NA	False	NA	NA	NA	28569775	28550687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28555484_28555548_28559127_28559193_28560322_28560575_28569582
tx.26265	chr17	-	1364	3	ISM	ENSMUSG00000002249.22	ENSMUST00000154873.9	2775	13	17058	49	2127	-4	3prime_fragment	FALSE	canonical	2	3	junction_1	2	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGACAGTTGTGCCAT	8449	False	NA	NA	False	NA	NA	NA	28552262	28550693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_28551808_28551924_28552078_28552165
tx.26266	chr17	-	3384	22	NIC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	20	5	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	46.8986943138577	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCCCCTCTCCTTTGA	8367	False	NA	NA	False	NA	NA	NA	29457121	29376884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478_29421543_29421828_29421880_29423662_29423723_29428397_29428475_29428663_29428704_29430621_29430726_29444164_29444212_29445166_29445208_29456586
tx.26267	chr17	+	157	2	Antisense	novelGene_ENSMUSG00000024008.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29426180	29436488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_+_29426320_29436470
tx.26268	chr17	+	2611	4	FSM	ENSMUSG00000044477.13	ENSMUST00000226308.2	2565	4	0	-46	0	-1	multi-exon	FALSE	canonical	2	8	junction_2	49.2769948578667	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGATTGTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	30224024	30428993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_30224283_30354296_30354480_30411536_30411705_30426991
tx.2627	chr11	+	4386	12	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	-5	-226	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	104.259609224774	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATGTTGAAGTGTCGT	NA	False	NA	NA	False	NA	NA	NA	49737592	49777012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49760038_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
tx.26272	chr17	-	4383	13	ISM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	738	7	727	-7	3prime_fragment	FALSE	canonical	2	135	junction_9	21.4688081230007	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTCACCTGTGAGAG	NA	False	NA	NA	False	NA	NA	NA	32074040	32063230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867
tx.26273	chr17	-	7255	3	FSM	ENSMUSG00000095325.4	ENSMUST00000178401.2	5126	3	-4902	2773	548	1861	multi-exon	FALSE	canonical	3	167	junction_1	2	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTCCTTTGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	33109959	33100974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33103140_33104676_33104738_33104930
tx.26274	chr17	+	2600	3	FSM	ENSMUSG00000024299.18	ENSMUST00000234715.2	2533	3	-68	1	-62	-1	multi-exon	FALSE	canonical	3	35	junction_2	2	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAAGTCCGGC	NA	False	NA	NA	False	NA	NA	NA	33743115	33749949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_33743233_33747257_33747445_33747653
tx.26275	chr17	-	1521	2	Genic_Genomic	ENSMUSG00000067370.5	novel	1580	1	NA	NA	-310	2	multi-exon	FALSE	canonical	3	7	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGCGTCTTCACCAGGC	NA	False	NA	NA	False	NA	NA	NA	34170772	34168880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr17_-_34170253_34170623
tx.26276	chr17	-	1658	5	NNC	ENSMUSG00000067203.9	novel	1567	5	NA	NA	18	16	intron_retention	FALSE	canonical	1	1	junction_4	7.58287544405155	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCTGAGTCACTATGCT	3662	False	NA	NA	False	NA	NA	NA	34197783	34193616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_34194054_34194470_34194588_34194714_34194990_34196844_34197591_34197700
tx.26277	chr17	-	2105	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	78	junction_2	4.12310562561766	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34243633	34240057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_34240458_34240656_34240931_34241269_34242169_34242266_34242428_34243262
tx.26278	chr17	-	2346	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	80	junction_2	3.11247489949718	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	34243629	34240060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_34240458_34240656_34242169_34242266_34242428_34243262_34243393_34243483
tx.26279	chr17	+	1262	3	ISM	ENSMUSG00000024334.10	ENSMUST00000174670.2	1231	4	1273	0	1273	0	3prime_fragment	FALSE	canonical	2	15	junction_1	2	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGTGTCCTTTTCAC	554	False	NA	NA	False	NA	NA	NA	34312668	34314207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_34313564_34313656_34313793_34313976
tx.2628	chr11	+	1459	8	FSM	ENSMUSG00000020376.18	ENSMUST00000054684.14	1415	8	-51	7	-51	-2	multi-exon	FALSE	canonical	3	67	junction_7	82.1161447249552	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTCGCCAGCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	49916121	49995578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49995375
tx.26280	chr17	-	2109	3	FSM	ENSMUSG00000073413.10	ENSMUST00000172639.8	690	3	16	-1435	7	1401	multi-exon	FALSE	canonical	2	8	junction_2	7	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGTTTATTTCTCAAG	NA	False	NA	NA	False	NA	NA	NA	35297025	35289017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35290736_35293150_35293289_35296772
tx.26281	chr17	-	3556	16	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-3310	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_7	94.6922500642065	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	4721	False	NA	NA	False	NA	NA	NA	35375545	35368051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
tx.26282	chr17	+	1893	2	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	2850	-267	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTATTTGCCTTCTTGGG	59	False	NA	NA	False	NA	NA	NA	35865874	35867810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_35865951_35865993
tx.26283	chr17	+	3843	2	NIC	ENSMUSG00000059791.15	novel	302	3	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	267	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACTTGTCTGTCCATG	4607	False	NA	NA	False	NA	NA	NA	36172227	36176292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_36175181_36175402
tx.26284	chr17	-	1378	12	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	38.0604130471848	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTACCGACAAAAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	36220951	36208501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_36208808_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
tx.26286	chr17	-	4699	13	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	940	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	76.0403767013873	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	43140981	43103841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808
tx.26288	chr17	+	3212	11	ISM	ENSMUSG00000023952.14	ENSMUST00000024748.14	2966	12	6	3	6	-1	intron_retention	TRUE	canonical	3	39	junction_1	11.6464586892325	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	NA	False	NA	NA	NA	46471963	46480293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651
tx.26289	chr17	-	210	2	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCCTTGTTAATCTT	NA	False	NA	NA	False	NA	NA	NA	46508469	46496064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_46496252_46508446
tx.2629	chr11	+	1526	9	FSM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	-27	3	-25	-3	multi-exon	FALSE	canonical	3	193	junction_8	44.3931300991494	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCCTTCGCCAGCGTGTG	NA	False	NA	NA	False	NA	NA	NA	49916147	49995577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
tx.26290	chr17	+	3155	10	Fusion	ENSMUSG00000071074.10_ENSMUSG00000071073.6	novel	2035	9	NA	NA	-22	1202	multi-exon	TRUE	canonical	0	0	junction_9	53.3124959293993	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCGGTCTGAGCGTGAC	2558	False	NA	NA	False	NA	NA	NA	46558983	46564665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491_46563410_46563513
tx.26291	chr17	+	1820	6	NNC	ENSMUSG00000047428.15	novel	1528	6	NA	NA	-118	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.22710574513201	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCTTCTGTGGAAGG	NA	False	NA	NA	False	NA	NA	NA	46608735	46614195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_46609005_46609317_46609625_46609873_46609938_46611876_46612008_46612569_46612715_46613291
tx.26292	chr17	-	1059	6	FSM	ENSMUSG00000002769.10	ENSMUST00000002846.9	1035	6	-24	0	-24	0	multi-exon	FALSE	canonical	3	17	junction_3	8.1338797630651	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCCTGGTGTTTCTT	2955	False	NA	NA	False	NA	NA	NA	47040118	47036589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_47036898_47036986_47037109_47037194_47037338_47037531_47037643_47038190_47038319_47039871
tx.26293	chr17	-	3157	9	ISM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	66976	-4	1825	4	3prime_fragment	FALSE	canonical	3	106	junction_6	12.1956703382799	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	47254470	47239216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262
tx.26294	chr17	-	440	2	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	47403177	47400288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_47400653_47403101
tx.26295	chr17	+	3809	10	ISM	ENSMUSG00000064043.16	ENSMUST00000190080.9	7044	19	182486	484	29359	-484	3prime_fragment	FALSE	canonical	3	40	junction_8	9.02397355744309	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGTGCCTGCTTCCTG	3832	False	NA	NA	False	NA	NA	NA	47634353	47672399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
tx.26296	chr17	-	6703	6	NIC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	-6	intron_retention	FALSE	canonical	3	187	junction_2	15.9072310601185	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGACATAGGGCCTC	NA	False	NA	NA	False	NA	NA	NA	47813212	47799212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
tx.26297	chr17	+	4082	6	NIC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-17	3	intron_retention	FALSE	canonical	3	46	junction_4	13.0322676461159	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGTGCTCTCGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	48006105	48015214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
tx.26298	chr17	+	4647	6	NNC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_3	29.3025596151599	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGTGAGTGCTCTCG	NA	False	NA	NA	False	NA	NA	NA	48006130	48015208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_48006198_48008115_48008259_48009497_48009587_48009846_48012710_48013494_48013650_48013878
tx.26299	chr17	+	3928	6	ISM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	7447	-2081	-12	2081	3prime_fragment	FALSE	canonical	3	16	junction_5	4.12795348811006	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAGGTATGGG	NA	False	NA	NA	False	NA	NA	NA	48769375	48777795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
tx.263	chr1	-	3635	8	NIC	ENSMUSG00000002881.15	novel	3640	9	NA	NA	-128	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	9.71008312455224	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTTAGAGTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	52539602	52496452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_52498466_52501246_52501364_52503943_52504104_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
tx.2630	chr11	+	3141	8	FSM	ENSMUSG00000020376.18	ENSMUST00000238748.2	7879	8	-26	4764	-25	-4764	multi-exon	FALSE	canonical	3	19	junction_7	98.8135742141716	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACAGTCTAGACAGTTAC	NA	False	NA	NA	False	NA	NA	NA	49916147	50011782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_50009871
tx.26300	chr17	-	3178	6	ISM	ENSMUSG00000042625.17	ENSMUST00000144255.8	2523	18	17895	-1968	398	2	3prime_fragment	FALSE	canonical	3	209	junction_1	22.4997777766804	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTAGTTTTTATTTTCC	823	False	NA	NA	False	NA	NA	NA	56873617	56867970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325
tx.26301	chr17	+	3351	4	NIC	ENSMUSG00000044279.16	novel	1206	4	NA	NA	-15	2205	intron_retention	FALSE	canonical	1	5	junction_3	90.1147416723072	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTGTGTGTGTGTTTA	1563	False	NA	NA	False	NA	NA	NA	57369267	57375123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_57369374_57369594_57369767_57370636_57370676_57372089
tx.26302	chr17	-	1221	7	NIC	ENSMUSG00000002668.9	novel	2521	24	NA	NA	1134	0	combination_of_known_splicesites	TRUE	canonical	3	5	junction_4	10.8844945781705	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTATCTGGGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	57377663	57373054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_57373642_57373731_57373943_57374048_57374117_57374592_57374701_57377112_57377185_57377407_57377449_57377529
tx.26303	chr17	-	1412	8	NIC	ENSMUSG00000002668.9	novel	2521	24	NA	NA	987	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	6.23027499638758	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTATCTGGGGCTTT	NA	False	NA	NA	False	NA	NA	NA	57377810	57373055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_57373642_57373731_57373943_57374048_57374117_57374592_57374701_57374788_57374834_57377112_57377185_57377407_57377449_57377529
tx.26304	chr17	-	1000	4	NNC	ENSMUSG00000079414.4	novel	1014	4	NA	NA	-9	10	intron_retention	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTTGTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	57412951	57399024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_57399770_57409087_57409154_57410349_57410485_57412897
tx.26305	chr17	+	1643	2	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAATTTGTCTTAGCTC	NA	False	NA	NA	False	NA	NA	NA	57892021	57896040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_+_57892195_57894570
tx.26306	chr17	+	1042	2	Antisense	novelGene_ENSMUSG00000073377.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	64841660	64843388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_+_64841731_64842416
tx.26307	chr17	-	3226	6	ISM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	50665	0	50553	0	3prime_fragment	FALSE	canonical	3	62	junction_1	7.12741187248218	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCCTTTCCTCATT	NA	False	NA	NA	False	NA	NA	NA	66029082	65958723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002
tx.26308	chr17	-	4535	7	ISM	ENSMUSG00000034647.16	ENSMUST00000150766.2	1513	8	-17	33577	0	2267	5prime_fragment	FALSE	canonical	3	24	junction_4	22.2011010737956	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATATAAAAGTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	66384034	66327616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
tx.26309	chr17	+	4282	28	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	47.8202510034783	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAACTTCATGATCAAG	NA	False	NA	NA	False	NA	NA	NA	66430546	66459162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66440430_66440518_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
tx.2631	chr11	+	4492	22	FSM	ENSMUSG00000036644.16	ENSMUST00000101270.5	5213	22	-31	752	-31	3	multi-exon	FALSE	canonical	3	13	junction_18	41.5114660552835	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTGCAGTGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	50022191	50062860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
tx.26310	chr17	+	1473	2	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACTATACTTATTTCA	NA	False	NA	NA	False	NA	NA	NA	66791209	66793990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_+_66791345_66792652
tx.26312	chr17	+	5764	13	FSM	ENSMUSG00000024044.20	ENSMUST00000225316.2	3966	13	-42	-1756	-8	1756	multi-exon	FALSE	canonical	3	33	junction_11	6.11180551610297	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69463730	69581599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605
tx.26313	chr17	+	4925	12	ISM	ENSMUSG00000024044.20	ENSMUST00000225316.2	3966	13	-41	7346	-7	21	5prime_fragment	FALSE	canonical	3	33	junction_11	5.96130774936545	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGATAACTAGAGAATTT	NA	False	NA	NA	False	NA	NA	NA	69463731	69572497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120
tx.26316	chr17	-	2271	2	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	73314421	73311526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_73313739_73314362
tx.26317	chr17	+	5693	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-118	0	intron_retention	FALSE	canonical	3	146	junction_1	31.7347338626517	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	9723	False	NA	NA	False	NA	NA	NA	74645863	74698110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
tx.26318	chr17	+	6393	33	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-98	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	6.24468524026632	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACAACCTGTCTATGAT	NA	False	NA	NA	False	NA	NA	NA	75312714	75698762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
tx.26319	chr17	-	4027	5	ISM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	22	19632	-13	1966	5prime_fragment	FALSE	canonical	3	281	junction_2	10.7558123821495	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTCTTGAATCTTT	NA	False	NA	NA	False	NA	NA	NA	78725538	78704945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
tx.2632	chr11	+	4326	21	NNC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	33.4159767177319	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	50022198	50062857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042250_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
tx.26320	chr17	+	1112	9	NIC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	-30	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	40.2086355774478	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGATGTGGCATTGTG	8800	False	NA	NA	False	NA	NA	NA	79142965	79152790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_79143108_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
tx.26321	chr17	-	4021	2	FSM	ENSMUSG00000045053.3	ENSMUST00000234613.2	3323	2	-153	-545	-153	545	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACACTCCTCCTGCCTCGT	NA	False	NA	NA	False	NA	NA	NA	83939477	83892840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_83895809_83938424
tx.26322	chr17	-	6895	9	NNC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	10	-69	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	34.935431513007	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGAATTAAAGACTTG	NA	False	NA	NA	False	NA	NA	NA	95057437	95030086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042846_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
tx.26323	chr17	-	6971	9	NNC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-15	-69	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	29.7108460835433	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGAATTAAAGACTTG	NA	False	NA	NA	False	NA	NA	NA	95057462	95030086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042846_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
tx.26324	chr17	-	5303	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	10	19091	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.6891789161883	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCTTGCTATGCTCAAT	NA	False	NA	NA	False	NA	NA	NA	95142216	95121394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_95126373_95127763_95127825_95128042_95128210_95142119
tx.26325	chr18	-	2063	6	NIC	ENSMUSG00000063889.17	novel	2931	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	32.251511592482	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	17	True	NA	NA	False	NA	NA	NA	3337552	3266355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_3267733_3273421_3273579_3295039_3295183_3295321_3295417_3325360_3325479_3337379
tx.26326	chr18	-	2747	8	NIC	ENSMUSG00000063889.17	novel	2820	9	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	30.0618410233686	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGCCTGTGTGTATGTC	15	True	NA	NA	False	NA	NA	NA	3337615	3266356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_3268130_3273421_3273579_3276693_3276730_3287903_3288093_3295039_3295183_3295321_3295417_3325360_3325479_3337379
tx.26328	chr18	-	472	2	FSM	ENSMUSG00000024235.12	ENSMUST00000172805.2	2048	2	64	1512	6	-1512	multi-exon	FALSE	canonical	3	28	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTTGAGTGCTGTGTGC	2	True	NA	NA	False	NA	NA	NA	4352951	4348966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_4349339_4352851
tx.26329	chr18	+	5245	5	FSM	ENSMUSG00000024236.19	ENSMUST00000129543.2	1732	5	-3512	-1	-3512	1	multi-exon	FALSE	canonical	3	100	junction_3	13.1790553530972	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCATTGTAAACATTACAC	NA	False	NA	NA	False	NA	NA	NA	5110740	5119219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
tx.2633	chr11	+	4437	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-27	-3	-27	3	multi-exon	FALSE	canonical	3	113	junction_18	14.0538251020852	210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTGCAGTGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	50022195	50062860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
tx.26330	chr18	-	2110	9	NIC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	-25	6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	26.9162474167556	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTCCATTTTCTCTA	NA	False	NA	NA	False	NA	NA	NA	9450179	9315944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9386734_9386810_9449517
tx.26332	chr18	+	3243	7	FSM	ENSMUSG00000005836.11	ENSMUST00000047762.10	3234	7	-16	7	-16	-7	multi-exon	FALSE	canonical	1	1	junction_2	0.897527467855751	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGAGATCCTTCCTTT	4823	False	NA	NA	False	NA	NA	NA	11052453	11085628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_11052744_11054035_11055190_11059051_11059219_11063017_11063144_11064509_11064598_11064687_11064792_11084314
tx.26333	chr18	-	3824	15	NNC	ENSMUSG00000024304.15	novel	4843	16	NA	NA	-68	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.0021254738702	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTGACTGGTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	16941587	16721939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_16723279_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
tx.26334	chr18	+	645	2	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	20895474	20911827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_20895821_20911528
tx.26335	chr18	+	772	3	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	20895474	20911828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_20895821_20901536_20901663_20911528
tx.26336	chr18	+	1200	3	Antisense	novelGene_ENSMUSG00000033382.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_2	6.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTACAAAGTCCAATTCA	NA	False	NA	NA	False	NA	NA	NA	20895657	20964762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr18_+_20895821_20951304_20951388_20963808
tx.26337	chr18	+	2852	2	Antisense	novelGene_ENSMUSG00000041923.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATGGTGTCTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	23122225	23135258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr18_+_23122522_23132702
tx.26338	chr18	-	3862	5	NNC	ENSMUSG00000024274.11	novel	1592	3	NA	NA	-61	2041	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.5	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACATAGATTTGAGTTT	1501	False	NA	NA	False	NA	NA	NA	24120344	24095833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_24098891_24103983_24104159_24104438_24104903_24114581_24114666_24120262
tx.26339	chr18	-	3274	11	NNC	ENSMUSG00000024268.17	novel	2492	13	NA	NA	-3830	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	11.6858889263932	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAACCTCAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	25638126	25610678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_25612769_25619850_25620023_25620296_25620376_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
tx.2634	chr11	+	4970	20	NIC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-58	-9	combination_of_known_splicesites	TRUE	canonical	3	5	junction_15	34.6020510816653	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTACTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	50022164	50063603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
tx.26340	chr18	-	5028	6	NNC	ENSMUSG00000024378.10	novel	5097	6	NA	NA	5	73	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	15.9072310601185	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGACCTTGTTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	33346910	33332334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346823
tx.26341	chr18	-	5021	5	FSM	ENSMUSG00000024378.10	ENSMUST00000118990.2	648	5	-67	-4306	-18	62	multi-exon	FALSE	canonical	0	0	junction_1	19.6643713349804	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCACTGGTCATTGACC	NA	False	NA	NA	False	NA	NA	NA	33346892	33332345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_33336869_33339172_33339300_33341229_33341280_33342095_33342211_33346686
tx.26342	chr14	+	178	1	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	2	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6479	False	NA	NA	False	NA	NA	NA	25849083	25849261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_25849100_25849300
tx.26343	chr18	-	5034	7	ISM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	2130	17	2130	-17	3prime_fragment	FALSE	canonical	3	57	junction_2	9.01849950564579	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATTTTACATACAAAATTC	NA	False	NA	NA	False	NA	NA	NA	35834044	35804172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856
tx.26344	chr18	-	2679	2	FSM	ENSMUSG00000100320.2	ENSMUST00000188160.2	571	2	14	-2122	14	2122	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTCTTCTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	35964132	35961319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_35963617_35963750
tx.26345	chr18	+	2626	7	NIC	ENSMUSG00000044024.17	novel	1762	8	NA	NA	22	-1	intron_retention	FALSE	canonical	0	0	junction_6	1.06718737290547	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTTGCTCTGCATCC	NA	False	NA	NA	False	NA	NA	NA	38088153	38092215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_38089621_38089981_38090048_38090141_38090209_38090641_38090828_38091066_38091443_38091564_38091625_38091811
tx.26346	chr18	-	2740	19	NIC	ENSMUSG00000038524.14	novel	4270	20	NA	NA	-9	-1683	intron_retention	FALSE	canonical	2	8	junction_12	2.55072006294422	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGGCCTGGGCCTCTTG	NA	False	NA	NA	False	NA	NA	NA	38102836	38092169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
tx.26347	chr18	-	3039	5	NIC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	42	-1533	intron_retention	FALSE	canonical	3	266	junction_1	23.9008368054342	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTGAAGTTTACTT	NA	False	NA	NA	False	NA	NA	NA	40352440	40338481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
tx.26348	chr18	+	196	2	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTAAGTTCTTCTCAC	7922	False	NA	NA	False	NA	NA	NA	42406306	42464255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_42406458_42464210
tx.26349	chr18	+	2067	3	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	3.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAAGTCAAGTACCA	NA	False	NA	NA	False	NA	NA	NA	44499350	44510601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_44499514_44501242_44501420_44508874
tx.2635	chr11	+	4377	20	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_18	31.7647167454221	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	50022195	50062857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
tx.26350	chr18	-	446	2	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTGTCCTTATTGA	NA	False	NA	NA	False	NA	NA	NA	45692397	45691124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_-_45691359_45692185
tx.26351	chr18	-	4452	10	FSM	ENSMUSG00000033949.13	ENSMUST00000167364.9	2553	10	-41	-1858	-41	-134	multi-exon	FALSE	canonical	0	0	junction_3	0.737027731190089	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGTGTAGTTATTCAAG	NA	False	NA	NA	False	NA	NA	NA	46331926	46298500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_46300835_46302211_46302510_46305444_46305736_46308614_46308740_46308937_46309192_46311467_46311564_46319188_46319336_46321457_46321784_46329140_46329376_46331580
tx.26352	chr18	-	4479	3	ISM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	31941	2163	-147	-2163	3prime_fragment	FALSE	canonical	3	105	junction_2	15	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46382119	46370580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_46374769_46379628_46379738_46381937
tx.26353	chr18	-	4705	19	FSM	ENSMUSG00000019647.17	ENSMUST00000019791.14	6856	19	-39	2190	-1	-4	multi-exon	FALSE	canonical	0	0	junction_1	1.06138739858571	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTGGAGCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	47501936	47380510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_47382652_47403675_47403841_47409652_47409674_47412182_47412242_47414186_47414268_47414358_47414500_47414861_47415039_47416375_47416532_47420489_47420622_47423042_47423261_47424162_47424252_47424954_47425075_47427086_47427178_47431252_47431355_47432143_47432207_47433150_47433212_47437170_47437289_47439422_47439561_47501304
tx.26355	chr18	+	2225	2	FSM	ENSMUSG00000058152.9	ENSMUST00000237594.2	3841	2	-60	1676	-60	-1676	multi-exon	FALSE	canonical	2	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGCTTTGCAGTTATT	NA	False	NA	NA	False	NA	NA	NA	59308412	59313417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_59309557_59312336
tx.26356	chr18	-	4955	3	FSM	ENSMUSG00000043079.18	ENSMUST00000097566.10	5060	3	89	16	-11	1	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGCCTCCTGTTCGTC	NA	False	NA	NA	False	NA	NA	NA	60757319	60727060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_60729561_60735184_60737563_60757242
tx.26357	chr18	+	903	2	FSM	ENSMUSG00000098702.2	ENSMUST00000184678.2	890	2	-14	1	-14	-1	multi-exon	FALSE	canonical	3	5	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCGATCTCTCAGTTTG	NA	False	NA	NA	False	NA	NA	NA	61859489	61868987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_61860074_61868668
tx.26358	chr18	+	4648	16	NIC	ENSMUSG00000045629.9	novel	4536	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	14	junction_10	4.1505019776729	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTTGTCACCTTTAT	NA	False	NA	NA	False	NA	NA	NA	62086146	62148790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
tx.2636	chr11	+	1158	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	-16	0	-16	0	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCTTGCTGCTACACTC	NA	False	NA	NA	False	NA	NA	NA	50065659	50090942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
tx.26361	chr18	+	4491	4	ISM	ENSMUSG00000024524.18	ENSMUST00000076605.9	3470	12	80514	-2552	79786	-5	3prime_fragment	FALSE	canonical	3	7	junction_2	2.05480466765633	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTGGGTTGTTTCGG	2814	False	NA	NA	False	NA	NA	NA	67346606	67359858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_67346680_67350140_67350272_67351574_67351643_67355639
tx.26362	chr18	+	1659	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	21	2186	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	389.0304536634	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTATCGAAGCCCACGT	NA	False	NA	NA	False	NA	NA	NA	67422276	67452165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_67422577_67435245_67435380_67439737_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
tx.26363	chr18	+	2460	4	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	4768	-10	4761	10	3prime_fragment	FALSE	canonical	3	414	junction_1	8.33999733546454	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGAAAGTATCTCTTTG	3693	False	NA	NA	False	NA	NA	NA	67779438	67787242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_67781317_67781842_67782017_67786222_67786344_67786955
tx.26364	chr18	+	2735	6	FSM	ENSMUSG00000024544.10	ENSMUST00000063775.5	2495	6	-242	2	-242	-2	multi-exon	FALSE	canonical	0	0	junction_1	10.7070070514593	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGCTATTTTGTGTAC	6382	False	NA	NA	False	NA	NA	NA	68066085	68388620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_68066460_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
tx.26365	chr18	+	7610	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	132	4999	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	8.80814017448254	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCCCTGGGGTTGTTT	6756	False	NA	NA	False	NA	NA	NA	68066459	68393621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_68066619_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
tx.26366	chr18	+	4055	2	FSM	ENSMUSG00000007480.6	ENSMUST00000172148.4	3904	2	-152	1	-152	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGAATTGGTCATTTG	NA	False	NA	NA	False	NA	NA	NA	68470514	68475516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_68470797_68471743
tx.26367	chr18	+	4686	20	NIC	ENSMUSG00000053477.19	novel	8577	20	NA	NA	1	664	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	30.4169547412964	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAATCTGAAATTTATG	1961	False	NA	NA	False	NA	NA	NA	69477560	69818263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_69478097_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
tx.26368	chr18	+	2846	5	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	63185	-1996	-4070	666	3prime_fragment	FALSE	canonical	3	43	junction_2	40.9351621469856	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCTGAAATTTATGTT	NA	False	NA	NA	False	NA	NA	NA	69808699	69818265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
tx.26369	chr18	+	7280	15	ISM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	-119	-23	-3	23	intron_retention	FALSE	canonical	3	24	junction_11	19.5223576695949	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAACAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401242	74415779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587
tx.2637	chr11	-	1997	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	37	3	1	-3	multi-exon	TRUE	canonical	0	0	junction_1	263.494104027287	710	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCCTGTGATCCGTACG	NA	False	NA	NA	False	NA	NA	NA	50101617	50090981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
tx.26372	chr18	-	1959	16	NNC	ENSMUSG00000025420.14	novel	1942	16	NA	NA	14028	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	8.22732574345327	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTCTCCTCATTT	NA	False	NA	NA	False	NA	NA	NA	77120911	77064843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
tx.26373	chr18	-	1685	2	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAATTTGTCCTCCTGA	NA	False	NA	NA	False	NA	NA	NA	78741124	78738803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_-_78739690_78740325
tx.26374	chr18	+	3394	4	FSM	ENSMUSG00000034006.18	ENSMUST00000134545.3	3258	4	-138	2	-115	-2	multi-exon	FALSE	canonical	3	12	junction_3	14.3527000944073	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATCTCTGCCCTCTTATC	NA	False	NA	NA	False	NA	NA	NA	80299383	80318364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80315676
tx.26375	chr18	+	2097	5	FSM	ENSMUSG00000034006.18	ENSMUST00000140594.8	2356	5	259	0	248	0	multi-exon	FALSE	canonical	3	12	junction_2	14.7732867026942	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCTTCATGTGGTGTA	NA	False	NA	NA	False	NA	NA	NA	80299780	80335929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
tx.26376	chr18	-	7112	18	ISM	ENSMUSG00000041258.19	ENSMUST00000171071.9	9626	30	56057	12	3391	-12	3prime_fragment	TRUE	canonical	1	5	junction_10	7.99350947779674	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTAAAACTCCCGTA	NA	False	NA	NA	False	NA	NA	NA	82654951	82611729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857
tx.26377	chr18	-	5638	19	ISM	ENSMUSG00000041258.19	ENSMUST00000182122.8	6059	31	53195	-1693	678	14	3prime_fragment	FALSE	canonical	1	5	junction_10	7.81024967590665	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTGTATGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	82657664	82613586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444
tx.26378	chr18	-	2762	4	NNC	ENSMUSG00000041258.19	novel	156	3	NA	NA	-31	2454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6627904356076	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGAAATGTGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	82711039	82696419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_82698602_82698716_82698882_82700269_82700413_82710767
tx.26379	chr19	+	5765	12	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	119.568438855109	5	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	NA	NA	NA	3818170	3868303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_3818341_3832219_3832280_3832755_3832853_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
tx.2638	chr11	-	1884	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	0	789	0	-3	multi-exon	FALSE	canonical	3	390	junction_1	128.516496201532	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCCTGTGATCCGTACG	NA	False	NA	NA	False	NA	NA	NA	50101618	50090981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
tx.26380	chr19	-	3775	3	ISM	ENSMUSG00000075289.6	ENSMUST00000167055.2	3968	10	4328	0	305	0	intron_retention	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCGGAGTCCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	4221150	4214322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_4216564_4219526_4219808_4219897
tx.26381	chr19	+	1641	3	FSM	ENSMUSG00000040663.10	ENSMUST00000126457.2	646	3	-10	-985	-10	8	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTTGCCTAGCTTGGT	2121	False	NA	NA	False	NA	NA	NA	4264637	4273552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4264687_4270231_4270399_4272127
tx.26382	chr19	-	3617	10	NIC	ENSMUSG00000005986.17	novel	2139	15	NA	NA	8	-1	intron_retention	FALSE	canonical	2	10	junction_1	4	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGCTTGCTGTCCTGCGT	868	False	NA	NA	False	NA	NA	NA	4333155	4320210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
tx.26383	chr19	-	3306	8	FSM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	284	-9	-7	9	multi-exon	FALSE	canonical	1	2	junction_3	1.55182578445717	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCAGCCTCCAGTC	NA	False	NA	NA	False	NA	NA	NA	4527191	4495926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792_4504009_4506522_4506916_4510644_4510839_4517934_4517992_4526962
tx.26384	chr19	+	1722	8	ISM	ENSMUSG00000067889.8	ENSMUST00000008991.8	8299	37	37810	4	7198	-4	3prime_fragment	FALSE	canonical	3	38	junction_7	3.91751691451488	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGGGTGTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	4799004	4802384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
tx.26385	chr19	-	538	2	FSM	ENSMUSG00000118263.2	ENSMUST00000235637.2	405	2	-128	-5	-128	2	multi-exon	FALSE	canonical	3	25	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTACTCTTTATTTAT	9072	False	NA	NA	False	NA	NA	NA	5357572	5355900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5356162_5357295
tx.26386	chr19	-	1861	2	ISM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	4	-1	4	-1	intron_retention	FALSE	canonical	3	999	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTTTGGTTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	5475003	5472837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_5473054_5473358
tx.26387	chr19	-	3626	16	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	-1	7	intron_retention	FALSE	canonical	3	17	junction_15	17.6320415405843	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8123	False	NA	NA	False	NA	NA	NA	5713709	5701247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
tx.26388	chr19	-	5722	19	FSM	ENSMUSG00000024937.16	ENSMUST00000049295.15	6404	19	9	673	9	0	multi-exon	FALSE	canonical	1	1	junction_10	4.40398248502365	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCTGCCCTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	5776336	5758076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5767689_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
tx.26389	chr19	-	2859	18	FSM	ENSMUSG00000024937.16	ENSMUST00000235730.2	2815	18	-38	-6	4	0	multi-exon	FALSE	canonical	2	5	junction_10	4.01295480019072	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCTGCCCTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	5776341	5758076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770713_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
tx.2639	chr11	+	2426	15	FSM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	3	0	3	0	multi-exon	FALSE	canonical	3	193	junction_14	11.6647471695966	313	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	NA	False	NA	NA	NA	50116164	50125930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
tx.26390	chr19	-	3188	19	FSM	ENSMUSG00000024937.16	ENSMUST00000236215.2	3160	19	-30	2	17	-2	multi-exon	FALSE	canonical	2	6	junction_10	3.83655259347101	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCGCCTGCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	5776328	5758079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770212_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
tx.26391	chr19	+	2141	6	FSM	ENSMUSG00000024818.16	ENSMUST00000025732.14	2480	6	340	-1	296	1	multi-exon	FALSE	canonical	1	1	junction_4	2.63818119165458	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGATCCCTTTCTGTC	3206	False	NA	NA	False	NA	NA	NA	5928184	5935795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5930467_5930654_5934372_5934632_5934750
tx.26392	chr19	+	1253	2	NNC	ENSMUSG00000110156.3	novel	410	2	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGCTCACACTACACAG	9367	False	NA	NA	False	NA	NA	NA	5962992	5964854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_5963101_5963709
tx.26393	chr19	-	1606	3	ISM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	718	19	12	-19	3prime_fragment	FALSE	canonical	3	907	junction_2	2	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATCATCTGAAACTCT	NA	False	NA	NA	False	NA	NA	NA	6107097	6103670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_6105013_6105105_6105231_6106958
tx.26394	chr19	+	1959	13	ISM	ENSMUSG00000032648.15	ENSMUST00000113483.2	2583	18	4301	-10	-3995	-1	3prime_fragment	FALSE	canonical	1	1	junction_1	7.61394918700028	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCTCTGTTGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	6438745	6448488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_6438911_6439189_6439283_6439485_6439633_6439802_6439967_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
tx.26395	chr19	-	204	2	Antisense	novelGene_ENSMUSG00000033768.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCAGGGTTCAATTCCC	NA	False	NA	NA	False	NA	NA	NA	6484737	6445392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr19_-_6445450_6484590
tx.26396	chr19	+	3309	8	NNC	ENSMUSG00000033768.18	novel	5001	21	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.55550625999976	3	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCAGTTTTGAAATT	NA	False	NA	NA	False	NA	NA	NA	6477934	6532730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_6478820_6498281_6498315_6500557_6500630_6505008_6505311_6522287_6522450_6523347_6523787_6531139_6531527_6531701
tx.26397	chr19	+	4617	4	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	-21	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.3076733143296	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCACTGTGTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	7394968	7403266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_7395283_7397431_7397927_7399278_7399828_7400007
tx.26398	chr19	-	5575	26	NIC	ENSMUSG00000036098.16	novel	5674	27	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	4.51911495759955	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCTGACATCTTCTT	7161	False	NA	NA	False	NA	NA	NA	10218093	10185634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192467_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383_10206472_10217922
tx.26399	chr19	-	5349	25	NIC	ENSMUSG00000036098.16	novel	5674	27	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_23	4.96585563847986	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCTGACATCTTCT	7122	False	NA	NA	False	NA	NA	NA	10218132	10185635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192467_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206383_10206472_10217922
tx.264	chr1	+	3383	9	FSM	ENSMUSG00000043015.16	ENSMUST00000165859.8	3396	9	13	0	13	0	multi-exon	FALSE	canonical	3	30	junction_5	7.49061913328932	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	52669874	52691078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682280_52682396_52684419_52684646_52687908_52688086_52688864
tx.2640	chr11	+	2519	14	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	-1	0	intron_retention	TRUE	canonical	3	193	junction_13	11.5957551915146	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	NA	False	NA	NA	NA	50116160	50125930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_50116567_50121506_50121693_50121787_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
tx.26400	chr19	-	2711	8	ISM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	4461	2	1659	-2	3prime_fragment	FALSE	canonical	3	47	junction_6	7.06818107248742	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTGTGACACTCTCTG	2669	False	NA	NA	False	NA	NA	NA	10842843	10835187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619
tx.26401	chr19	+	3174	3	FSM	ENSMUSG00000024683.7	ENSMUST00000237728.2	2981	3	-26	-167	-5	0	multi-exon	FALSE	canonical	3	302	junction_2	27	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTATCTCCGGACCT	156	False	NA	NA	False	NA	NA	NA	11747749	11752324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_11747889_11748165_11750388_11751511
tx.26402	chr19	-	4493	11	NNC	ENSMUSG00000024695.17	novel	5531	11	NA	NA	-449	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	42.943684052489	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCCTTTTAATCTA	NA	False	NA	NA	False	NA	NA	NA	12773939	12744379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12773838
tx.26403	chr19	-	1093	11	ISM	ENSMUSG00000046230.12	ENSMUST00000224428.2	2689	19	-50	11908	-29	-4953	5prime_fragment	FALSE	canonical	3	29	junction_4	6.00333240792145	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGATTGACTTACTGTT	NA	False	NA	NA	False	NA	NA	NA	16758326	16723296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
tx.26404	chr19	+	5374	9	NNC	ENSMUSG00000037847.15	novel	1940	9	NA	NA	2	39	intron_retention	FALSE	canonical	2	9	junction_8	26.6587227751068	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTCAGTTGTCATTAT	NA	False	NA	NA	False	NA	NA	NA	18609315	18629831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18625900_18628599
tx.26405	chr19	-	178	1	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATATTCTTTGGT	9994	False	NA	NA	False	NA	NA	NA	23065922	23065744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr19_-_23065700_23065900
tx.26406	chr19	+	3827	5	ISM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	-7	19554	-7	-8084	5prime_fragment	FALSE	canonical	3	15	junction_4	2.27760839478607	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACAGATTATTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	23664785	23689478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117
tx.26407	chr19	-	3530	7	ISM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	-374	81818	-374	19549	5prime_fragment	FALSE	canonical	3	28	junction_1	6.34209919681348	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGGAAACTTGTTCAGA	NA	False	NA	NA	False	NA	NA	NA	24533610	24353975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
tx.26409	chr19	+	485	3	ISM	ENSMUSG00000024806.5	ENSMUST00000235954.2	739	5	6688	-23	6688	23	3prime_fragment	FALSE	canonical	3	41	junction_1	3.5	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTGGGCAGTAATGCA	NA	False	NA	NA	False	NA	NA	NA	29682021	29685849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_29682117_29684207_29684322_29685573
tx.2641	chr11	-	5553	5	FSM	ENSMUSG00000050567.17	ENSMUST00000059458.5	5528	5	-27	2	-27	-2	multi-exon	FALSE	canonical	3	42	junction_4	8.0156097709407	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACAAGCATGTTTGACT	NA	False	NA	NA	False	NA	NA	NA	50183165	50146462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50182552
tx.26410	chr19	+	5264	9	NNC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	9	-2836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.8153408264246	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGTGTTTTATTAA	7700	False	NA	NA	False	NA	NA	NA	32735003	32800724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777345_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
tx.26411	chr19	+	1487	9	FSM	ENSMUSG00000024778.14	ENSMUST00000025691.13	1481	9	-6	0	-6	0	multi-exon	FALSE	canonical	1	1	junction_8	3.55096817783545	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTGTTGTCTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	34268059	34305172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_34268145_34284524_34284679_34292578_34292717_34293968_34294078_34295989_34296052_34296182_34296237_34296709_34296790_34297960_34297986_34304392
tx.26412	chr19	+	6362	9	NIC	ENSMUSG00000024805.17	novel	1566	9	NA	NA	-28	-7	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	39.0736484091261	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATTGTTGGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	36387119	36438363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414705_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
tx.26413	chr19	+	6405	10	NIC	ENSMUSG00000024805.17	novel	1626	10	NA	NA	-12	-8	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	41.0365690573664	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTATTGTTGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	36387135	36438362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414705_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
tx.26414	chr19	+	4606	19	NIC	ENSMUSG00000041180.14	novel	3842	21	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	8.64402312597954	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTCAGTTCATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	36532037	36598532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
tx.26415	chr19	+	4606	7	ISM	ENSMUSG00000041180.14	ENSMUST00000177381.8	1679	16	22262	-2282	2584	-6	3prime_fragment	FALSE	canonical	3	21	junction_6	4.48763733927875	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCAGGCTTCAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	36585150	36598526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
tx.26416	chr19	-	206	2	Antisense	novelGene_ENSMUSG00000024811.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCTGAGAGCTTTGAG	NA	False	NA	NA	False	NA	NA	NA	36864825	36841801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr19_-_36841958_36864775
tx.26417	chr19	-	5862	10	NIC	ENSMUSG00000039652.17	novel	4224	11	NA	NA	-1	-1	combination_of_known_junctions	TRUE	canonical	2	4	junction_9	2.19988776369148	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGTGCGAGATCTCAACA	9204	False	NA	NA	False	NA	NA	NA	37184862	36998697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37116530_37116622_37151366_37152386_37184631
tx.26418	chr19	+	9686	33	FSM	ENSMUSG00000024998.18	ENSMUST00000182481.8	8357	33	-127	-1202	-115	-398	multi-exon	FALSE	canonical	1	8	junction_11	5.14743564797074	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAATAATAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	38469441	38773076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_38469805_38512358_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
tx.26419	chr19	+	343	2	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTAGTCTTGGTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	39948009	39960200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr19_+_39948197_39960044
tx.2642	chr11	-	4759	4	ISM	ENSMUSG00000050567.17	ENSMUST00000059458.5	5528	5	25481	3	24974	-3	3prime_fragment	FALSE	canonical	3	46	junction_2	7.78888096369861	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACAAGCATGTTTGAC	NA	False	NA	NA	False	NA	NA	NA	50157657	50146463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421
tx.26420	chr19	-	5669	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	4	2713	intron_retention	FALSE	canonical	3	22	junction_3	18.4479034520711	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9864	False	NA	NA	False	NA	NA	NA	40502219	40280483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
tx.26421	chr19	-	6951	3	FSM	ENSMUSG00000025006.19	ENSMUST00000225306.2	575	3	-3398	-2978	-3398	2712	multi-exon	FALSE	canonical	3	38	junction_2	1.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	8039	False	NA	NA	False	NA	NA	NA	40291668	40280484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_40283561_40284975_40285089_40287906
tx.26422	chr19	+	6692	4	NIC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	45.7019328548221	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGTTTCTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	40883148	40906388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_40883235_40885527_40885610_40899476_40899554_40899941
tx.26423	chr19	+	6265	6	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	20	790	intron_retention	FALSE	canonical	1	2	junction_2	35.1590671093532	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGAGTGACTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	41471095	41575765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_41471223_41471965_41472040_41534313_41534447_41540887_41541176_41544046_41544141_41570216
tx.26424	chr19	+	1215	9	FSM	ENSMUSG00000025193.15	ENSMUST00000026199.14	1298	9	85	-2	-17	2	multi-exon	FALSE	canonical	3	9	junction_5	8.4400459121974	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATAGTCTCAGGTT	9257	False	NA	NA	False	NA	NA	NA	43741519	43757072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751341_43751446_43753398_43753427_43755639_43755746_43756613
tx.26425	chr19	-	4554	16	NNC	ENSMUSG00000074818.14	novel	3265	16	NA	NA	-886	0	intron_retention	TRUE	canonical	3	10	junction_5	4.01331118487798	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGGTCTGACTTCAG	NA	False	NA	NA	False	NA	NA	NA	45035042	45015344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
tx.26426	chr19	-	188	1	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAAGAAACCAC	NA	False	NA	NA	False	NA	NA	NA	45376499	45376311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr19_-_45376300_45376500
tx.26427	chr19	+	834	6	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	-22	214	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	159.454570332744	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGACTGCCCCTTTCTC	3670	False	NA	NA	False	NA	NA	NA	45549031	45566196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_45549147_45553349_45553431_45560323_45560438_45560843_45560978_45565431_45565535_45565909
tx.26428	chr19	-	1175	5	ISM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	7	2	7	-2	intron_retention	FALSE	canonical	3	216	junction_3	14.3614066163451	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTGTGTGGCTTTTTC	4894	False	NA	NA	False	NA	NA	NA	45738023	45736174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495
tx.26429	chr19	-	4863	20	ISM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-110	101079	-110	1	5prime_fragment	FALSE	canonical	3	159	junction_14	18.7022151946125	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGCTTGCCTGTGTATG	6537	False	NA	NA	False	NA	NA	NA	45987037	45906881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
tx.2643	chr11	-	3756	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	21	2	21	-2	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	8042	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8157	False	NA	NA	False	NA	NA	NA	50216479	50185295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
tx.26430	chr19	+	2189	13	NNC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	14.6657196663966	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAACACTGTCTGCAAA	NA	False	NA	NA	False	NA	NA	NA	46561800	46585333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110_46583794_46584813
tx.26431	chr19	+	157	2	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAAATAAGTAAATCTT	NA	False	NA	NA	False	NA	NA	NA	47040798	47053624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr19_+_47040905_47053573
tx.26432	chr19	-	2351	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGTCTCTTGGTTTGAT	5177	False	NA	NA	False	NA	NA	NA	53052912	53038324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr19_-_53040340_53050437_53050648_53052786
tx.26433	chr19	+	4339	2	ISM	ENSMUSG00000043639.16	ENSMUST00000161856.2	4663	7	14966	0	14966	0	3prime_fragment	FALSE	canonical	3	18	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCTGTGTCATGCAG	NA	False	NA	NA	False	NA	NA	NA	53846606	53855511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_53847945_53852510
tx.26434	chr19	-	1835	3	ISM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	1046	-1	599	1	3prime_fragment	FALSE	canonical	3	143	junction_2	31.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCAACAGTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	53932012	53918290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_53919934_53920560_53920637_53931896
tx.26435	chr19	+	4078	13	NIC	ENSMUSG00000024985.21	novel	3715	14	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	26.9602330603181	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCTGGCCGCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	55730239	55922087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
tx.26436	chr19	+	3540	12	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	248	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_10	23.2787634217602	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	NA	False	NA	NA	NA	55731021	55922086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
tx.26437	chr19	+	3197	10	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	279	-4659	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	32.9110285841864	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACTTGCTGACTTCCG	NA	False	NA	NA	False	NA	NA	NA	56536971	56587276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_56537293_56540190_56540344_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
tx.26438	chr19	+	4049	14	FSM	ENSMUSG00000025082.9	ENSMUST00000026068.8	4049	14	-2	2	-2	-2	multi-exon	TRUE	canonical	0	0	junction_13	1.44729905555591	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTTTGCCTAGGCAGGC	NA	False	NA	NA	False	NA	NA	NA	56862678	56900508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_56863011_56869556_56869619_56873454_56873530_56875309_56875444_56882197_56882308_56886305_56886498_56889959_56890094_56890667_56890801_56891898_56891955_56893910_56894019_56894821_56895395_56897263_56897816_56898121_56898248_56899046
tx.26439	chr19	+	3142	8	ISM	ENSMUSG00000025082.9	ENSMUST00000026068.8	4049	14	27283	0	27283	0	3prime_fragment	FALSE	canonical	0	0	junction_7	1.59078981795143	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTTGCCTAGGCAGGCTT	NA	False	NA	NA	False	NA	NA	NA	56889963	56900510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_56890094_56890667_56890801_56891898_56891955_56893910_56894019_56894821_56895395_56897263_56897816_56898121_56898248_56899046
tx.2644	chr11	+	2235	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	-9	-1	-9	0	multi-exon	TRUE	canonical	3	130	junction_1	115.462537790991	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	50268536	50277355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
tx.26440	chr19	-	3577	19	FSM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	-45	-1	-15	1	multi-exon	FALSE	canonical	0	0	junction_18	3.34257976810918	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGTTTCCCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	56996675	56900791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56996582
tx.26441	chr19	+	1827	8	ISM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	-6	478161	-6	-478161	5prime_fragment	FALSE	canonical	3	13	junction_6	8.8132553229641	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTGTCCTTGAATAC	NA	False	NA	NA	False	NA	NA	NA	57599459	57643614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202
tx.26442	chr19	+	2360	10	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	0	-471723	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	11.4643839243734	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGTTTCACAGTTAATT	NA	False	NA	NA	False	NA	NA	NA	57599465	57650052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57649541
tx.26443	chr19	+	1468	6	ISM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	19	482745	19	-482745	5prime_fragment	FALSE	canonical	3	21	junction_5	5.2	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCGTTTAGAGTGATT	NA	False	NA	NA	False	NA	NA	NA	57599484	57639030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689
tx.26444	chr19	+	2832	9	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	3	1779	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	12.4172259381876	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAAGAGCATTTGCCTGC	NA	False	NA	NA	False	NA	NA	NA	58500426	58543296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_58500459_58500742_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
tx.26445	chr19	+	1111	4	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	-13	-25277	intron_retention	FALSE	canonical	3	27	junction_2	7.36357401145817	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGTTATGAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	58500439	58516183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703
tx.26446	chr19	-	5794	4	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-6369	1719	multi-exon	FALSE	canonical	3	8	junction_3	17.2497987105808	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAAAAATATAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	61291876	61283620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr19_-_61285953_61287055_61287117_61287295_61287423_61288602
tx.26447	chr19	-	3145	2	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCCTAAGAGACTTTG	NA	False	NA	NA	False	NA	NA	NA	61301942	61289660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr19_-_61292709_61301845
tx.26448	chr1_GL456211v1_random	-	5414	2	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCTAGCCTTGGTTCAA	NA	False	NA	NA	False	NA	NA	NA	190196	165732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_GL456211v1_random_-_165929_184978
tx.2645	chr11	+	2374	13	ISM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	340	-1	-232	0	3prime_fragment	FALSE	canonical	3	224	junction_3	98.8039585351833	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	50268885	50277355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
tx.26451	chr2	-	6648	11	NNC	ENSMUSG00000039145.17	novel	6962	11	NA	NA	5746	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.1170716943246	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTGGGTTGTCTGT	6923	False	NA	NA	False	NA	NA	NA	5675111	5298273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5675049
tx.26452	chr2	+	7469	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	35.0102267392167	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4629	False	NA	NA	False	NA	NA	NA	6327452	6451201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
tx.26453	chr2	+	8075	24	NIC	ENSMUSG00000061186.16	novel	7874	23	NA	NA	-147	-4	combination_of_known_junctions	TRUE	canonical	2	8	junction_3	14.3404460598235	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGGTGGTGTTTGTGTT	4542	False	NA	NA	False	NA	NA	NA	10377099	10600060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_10377428_10384995_10385047_10385833_10385878_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
tx.26454	chr2	-	6856	3	ISM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	124786	1	124015	-1	3prime_fragment	FALSE	canonical	3	69	junction_1	6	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACATCGTTGTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	13674089	13655832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_13662102_13670230_13670324_13673595
tx.26455	chr2	+	1394	2	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17940485	17942191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_17940656_17940967
tx.26456	chr2	+	2588	2	Antisense	novelGene_ENSMUSG00000054057.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGTAATACTCTTTT	4588	False	NA	NA	False	NA	NA	NA	18032553	18035390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_+_18032675_18032923
tx.26457	chr2	-	1681	2	NNC	ENSMUSG00000054074.10	novel	835	2	NA	NA	-15413	-429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAGAATCAAGTCAGTGTA	NA	False	NA	NA	False	NA	NA	NA	18069275	18053383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_18055005_18069215
tx.26458	chr2	-	5040	13	FSM	ENSMUSG00000026740.13	ENSMUST00000091418.12	5070	13	24	6	24	-6	multi-exon	FALSE	canonical	1	1	junction_1	17.4712064710928	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATCCTCTGAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	18397598	18211149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_18214232_18222055_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
tx.26459	chr2	-	3476	9	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-159	-7	combination_of_known_splicesites	FALSE	canonical	1	8	junction_6	32.4075608461976	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGTTTGGCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	19003096	18847072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18911039_18911137_18912865_18912964_19002662
tx.2646	chr11	+	3882	9	ISM	ENSMUSG00000007850.17	ENSMUST00000123371.8	4002	12	2452	-607	1920	0	3prime_fragment	FALSE	canonical	3	385	junction_6	42.5820898383346	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	50271047	50277355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
tx.26460	chr2	+	188	2	Antisense	novelGene_ENSMUSG00000081861.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTGCCTCTACTTCCC	NA	False	NA	NA	False	NA	NA	NA	22798448	22810973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_+_22798466_22810802
tx.26461	chr2	-	5132	27	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	-24	25	combination_of_known_junctions	TRUE	canonical	3	34	junction_23	58.7975666686458	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCATTATGACACATT	9566	False	NA	NA	False	NA	NA	NA	24809650	24680781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777079_24809565
tx.26462	chr2	-	5077	27	FSM	ENSMUSG00000036893.18	ENSMUST00000091348.11	4615	27	-20	-442	0	22	multi-exon	FALSE	canonical	3	73	junction_26	45.6963867643122	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9597	False	NA	NA	False	NA	NA	NA	24809619	24680784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
tx.26463	chr2	-	4936	26	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-3	22	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	65.0794714176444	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9594	False	NA	NA	False	NA	NA	NA	24809622	24680784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
tx.26464	chr2	-	1656	7	NIC	ENSMUSG00000026972.16	novel	1590	7	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_2	30.4940795711051	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCGAGTGGCTGGCC	9365	False	NA	NA	False	NA	NA	NA	24825216	24815364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_24815689_24815767_24816461_24816594_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
tx.26465	chr2	+	3999	14	NIC	ENSMUSG00000006476.20	novel	2922	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_10	1.86528548507418	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGTCTTCTC	9530	False	NA	NA	False	NA	NA	NA	24944394	24952893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
tx.26466	chr2	+	3012	6	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-10	-700	intron_retention	FALSE	canonical	3	105	junction_2	6.41872261435249	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGCTCGGCAGTGTCA	6686	False	NA	NA	False	NA	NA	NA	25262361	25267525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_25263011_25263427_25263530_25264963_25265844_25265979_25266088_25266175_25266287_25266363
tx.26467	chr2	-	3460	6	NIC	ENSMUSG00000026933.18	novel	5464	15	NA	NA	-2083	285	combination_of_known_junctions	FALSE	canonical	3	102	junction_4	19.70786644972	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGTGTGTGGTTGTCA	NA	False	NA	NA	False	NA	NA	NA	25827656	25818257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526
tx.26468	chr2	-	8820	31	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	1	1	intron_retention	FALSE	canonical	3	8	junction_2	46.4058066290081	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCTTCCTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	26335225	26299441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_26300966_26301098_26301182_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
tx.26469	chr2	-	2661	2	Genic_Genomic	ENSMUSG00000077192.5	novel	132	1	NA	NA	-923	2013	multi-exon	FALSE	canonical	3	60	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAATCTTTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	26530256	26527188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_-_26527646_26528052
tx.2647	chr11	-	2684	18	FSM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	1	3	1	-3	multi-exon	FALSE	canonical	3	52	junction_10	7.873128931343	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCTGGCCTCCAGCTT	4150	False	NA	NA	False	NA	NA	NA	50321951	50280115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
tx.26473	chr2	+	5876	44	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	88018	7	-42998	-7	3prime_fragment	FALSE	canonical	3	23	junction_8	10.0717276141477	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAACTTGACTAGCTGT	NA	False	NA	NA	False	NA	NA	NA	27864454	27929519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
tx.26475	chr2	+	3367	6	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	135855	5	-6	-5	3prime_fragment	FALSE	canonical	3	32	junction_4	5.16139516022558	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTGACTAGCTGTCT	401	False	NA	NA	False	NA	NA	NA	27912291	27929521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
tx.26477	chr2	-	4116	5	ISM	ENSMUSG00000079502.9	ENSMUST00000189711.7	1759	6	-16	25702	4	2715	5prime_fragment	FALSE	canonical	1	3	junction_3	1.4142135623731	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CATAGAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	28945067	28842666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_28846109_28852643_28852750_28874307_28874534_28875813_28875914_28944825
tx.2648	chr11	-	2475	18	NIC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-58	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	12.7347167373532	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTGCTGGCCTCCAGC	747	False	NA	NA	False	NA	NA	NA	50312876	50280117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
tx.26480	chr2	-	3827	15	ISM	ENSMUSG00000039686.15	ENSMUST00000113677.3	4189	16	11156	0	-2653	0	3prime_fragment	FALSE	canonical	3	68	junction_8	7.65053019371193	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGTGGTGTCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	30003438	29987294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257
tx.26481	chr2	-	3478	13	NIC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	1	561	intron_retention	FALSE	canonical	3	47	junction_1	7.14677471933241	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	NA	False	NA	NA	NA	30305611	30291948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
tx.26482	chr2	-	3781	2	ISM	ENSMUSG00000044320.15	ENSMUST00000133380.8	774	5	2995	-614	352	-2	3prime_fragment	FALSE	canonical	3	34	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTCTAGGTGCCTGAT	NA	False	NA	NA	False	NA	NA	NA	30690661	30685579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_30686579_30687879
tx.26483	chr2	-	1869	5	NIC	ENSMUSG00000044320.15	novel	1672	7	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	15	junction_4	6.81909084849293	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAAGCCACTCTAGGTG	NA	False	NA	NA	False	NA	NA	NA	30691733	30685585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
tx.26484	chr2	+	3499	2	ISM	ENSMUSG00000026857.10	ENSMUST00000138889.8	1192	4	29	4	13	-4	intron_retention	FALSE	canonical	3	558	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAGATGCCCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	30697981	30713025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_30698096_30709640
tx.26485	chr2	-	2823	5	FSM	ENSMUSG00000039483.11	ENSMUST00000148036.7	2792	5	-31	0	6	0	multi-exon	FALSE	canonical	3	92	junction_4	10.6858551365813	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTCTTTGTATGACA	1730	False	NA	NA	False	NA	NA	NA	30718297	30713108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_30714517_30714652_30715573_30715666_30715774_30716934_30717111_30718085
tx.26486	chr2	+	2129	3	NIC	ENSMUSG00000039476.14	novel	1441	4	NA	NA	-173	0	intron_retention	FALSE	canonical	2	7	junction_1	4	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGGCTTCAGAAGGGCA	NA	False	NA	NA	False	NA	NA	NA	30735282	30771263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_30735694_30768421_30769683_30770806
tx.26487	chr2	+	4329	24	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	-13	-942	intron_retention	FALSE	canonical	1	7	junction_20	9.13540237534978	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGCTTGTACTGTGACA	NA	False	NA	NA	False	NA	NA	NA	30872361	30912652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
tx.26488	chr2	-	9364	5	ISM	ENSMUSG00000075415.14	ENSMUST00000128431.3	1064	10	9642	-3476	9642	-1420	intron_retention	FALSE	canonical	3	114	junction_2	8.64580823289529	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTGTATTTTAAGTGA	NA	False	NA	NA	False	NA	NA	NA	30935814	30919626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416
tx.26489	chr2	+	4317	26	NNC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_20	29.1518507131194	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	32178296	32197924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195224_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
tx.2649	chr11	-	5368	5	FSM	ENSMUSG00000044807.14	ENSMUST00000109135.9	5325	5	-40	-3	-6	3	multi-exon	FALSE	canonical	3	17	junction_4	5.87367006223537	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGTGGTGAATGTGAG	290	False	NA	NA	False	NA	NA	NA	50718557	50701909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718405
tx.26490	chr2	+	2728	4	FSM	ENSMUSG00000009563.17	ENSMUST00000149720.3	2712	4	-16	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	10.6562449087639	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGACCAAAGTTTCTT	615	False	NA	NA	False	NA	NA	NA	32647271	32652254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_32648949_32649538_32649715_32650600_32650729_32651507
tx.26491	chr2	-	187	2	Genic_Genomic	ENSMUSG00000104277.2	novel	3789	1	NA	NA	2490	161154	multi-exon	TRUE	canonical	3	106	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGGAGACACTGACAGC	NA	False	NA	NA	False	NA	NA	NA	32889837	32727384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_-_32727523_32889788
tx.26492	chr2	-	5193	12	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	8	-7715	combination_of_known_junctions	FALSE	canonical	3	92	junction_10	12.5283150377834	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33020612	32917035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
tx.26493	chr2	-	6858	3	NNC	ENSMUSG00000068966.11	novel	6602	3	NA	NA	90	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	22	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGCTGTGGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	33321239	33296122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_33302508_33318112_33318233_33320886
tx.26494	chr2	-	5398	8	FSM	ENSMUSG00000038765.15	ENSMUST00000176067.2	1420	8	-618	-3360	-490	0	multi-exon	TRUE	canonical	0	0	junction_1	1.4142135623731	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGCCCCTCCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	33531110	33450976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_33454806_33455072_33455238_33456682_33456750_33456896_33456975_33457159_33457342_33459061_33459295_33529500_33529688_33530453
tx.26495	chr2	+	609	2	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	34021412	34027618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_34021538_34027134
tx.26496	chr2	-	2567	8	FSM	ENSMUSG00000038718.16	ENSMUST00000153278.8	1063	8	-83	-1421	35	-3	multi-exon	FALSE	canonical	1	7	junction_6	10.7285619174392	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGCCATGTGTGTCTC	873	False	NA	NA	False	NA	NA	NA	34262015	34061471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34260835_34260910_34261732
tx.26497	chr2	+	2285	6	FSM	ENSMUSG00000026870.20	ENSMUST00000113068.9	2278	6	-6	-1	-6	0	multi-exon	FALSE	canonical	0	0	junction_5	0.8	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGAATTTACTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	34764401	34782072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_34764604_34772303_34772450_34775882_34775943_34777763_34777810_34778133_34778184_34780291
tx.26498	chr2	-	2151	11	FSM	ENSMUSG00000026875.15	ENSMUST00000113064.8	2325	11	174	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_10	3.16385840391127	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCAGGTGTGAGACCA	NA	False	NA	NA	False	NA	NA	NA	34851610	34833269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524_34848624_34849486_34849526_34850832_34850900_34851535
tx.26499	chr2	+	4933	16	NNC	ENSMUSG00000057110.16	novel	3148	18	NA	NA	-33	-792	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	15.7135468801781	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTCATCTTCAGATGA	NA	False	NA	NA	False	NA	NA	NA	35022212	35049856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607
tx.265	chr1	+	2640	4	NIC	ENSMUSG00000043015.16	novel	3247	8	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	18.263503375737	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	52669877	52691078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_52670011_52676523_52676640_52687908_52688086_52688864
tx.2650	chr11	-	5378	5	NNC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	8.46684711093805	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTGGTGAATGTGAGC	290	False	NA	NA	False	NA	NA	NA	50718557	50701908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718396
tx.26500	chr2	-	4013	9	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-88	-222	intron_retention	FALSE	canonical	0	0	junction_7	16.2538456987877	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCGTAAATATCTGTATT	NA	False	NA	NA	False	NA	NA	NA	37313003	37287124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
tx.26501	chr2	+	2920	10	FSM	ENSMUSG00000026749.12	ENSMUST00000112895.8	1513	10	45	-1452	45	-262	multi-exon	FALSE	canonical	1	1	junction_1	94.3328752769929	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGTTTGCACAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	38401870	38477230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_38401992_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
tx.26502	chr2	-	5712	8	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	24133	-5	3383	1	3prime_fragment	FALSE	canonical	3	61	junction_5	20.3540097839643	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCTGTGAAGCTTAT	NA	False	NA	NA	False	NA	NA	NA	38650394	38613380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198
tx.26503	chr2	-	2485	10	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	-11	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	17.0619785227596	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTAGCATATTCATTTG	NA	False	NA	NA	False	NA	NA	NA	44817259	44454435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44817153
tx.26504	chr2	+	3335	2	FSM	ENSMUSG00000036792.13	ENSMUST00000148796.2	608	2	-425	-2302	15	2302	multi-exon	FALSE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTCTTATATTTTAT	6241	False	NA	NA	False	NA	NA	NA	48839549	48846381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_48840188_48843684
tx.26505	chr2	-	3499	8	NIC	ENSMUSG00000026826.14	novel	3422	8	NA	NA	-200	-2	combination_of_known_junctions	TRUE	canonical	1	2	junction_5	1.27775312999988	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTTATTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	57014215	56996843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_56998425_56998572_56998631_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57013840
tx.26506	chr2	-	969	2	NNC	ENSMUSG00000054181.12	novel	1541	2	NA	NA	-142	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCTGCTTGGAGAT	NA	False	NA	NA	False	NA	NA	NA	57128662	57126244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_57126985_57128433
tx.26507	chr2	-	3395	10	NIC	ENSMUSG00000026836.16	novel	3050	12	NA	NA	-389	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	17.4065405615529	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	58457558	58336452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58456798
tx.26508	chr2	+	4614	22	FSM	ENSMUSG00000026991.21	ENSMUST00000102754.11	4614	22	-2	2	-2	-1	multi-exon	TRUE	canonical	0	0	junction_9	23.3372202787765	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	NA	False	NA	NA	NA	58991191	59185547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
tx.26509	chr2	+	7154	5	ISM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	17309	128	-4604	-128	3prime_fragment	FALSE	canonical	3	236	junction_3	28.5394463856607	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGTGCTTTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	62511937	62524325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
tx.2651	chr11	-	5955	4	NIC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	2	1	intron_retention	FALSE	canonical	3	17	junction_3	6.23609564462324	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAAGTGGTGAATGTG	298	False	NA	NA	False	NA	NA	NA	50718549	50701911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_50706821_50707945_50708763_50717252_50717338_50718405
tx.26510	chr2	+	10431	6	FSM	ENSMUSG00000044647.17	ENSMUST00000053910.10	4495	6	2	-5938	-1	-2	multi-exon	FALSE	canonical	2	6	junction_1	3.18747549010185	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTTATTGCGTTTTTA	5680	False	NA	NA	False	NA	NA	NA	65676187	65861888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_65676229_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
tx.26511	chr2	-	2751	18	ISM	ENSMUSG00000034848.18	ENSMUST00000125446.3	4061	28	-36	37812	-11	-4440	5prime_fragment	FALSE	canonical	2	5	junction_10	6.52543599147925	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATAAATAGTCCATTGT	NA	False	NA	NA	False	NA	NA	NA	66086972	66052798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_66053137_66053858_66053970_66054419_66054493_66056249_66056489_66057074_66057297_66059325_66059484_66061632_66061763_66065386_66065588_66065916_66066015_66066564_66066758_66068130_66068230_66069866_66069952_66072974_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
tx.26512	chr2	+	4312	9	ISM	ENSMUSG00000027035.11	ENSMUST00000176018.2	1279	11	-468	693	-323	-693	intron_retention	TRUE	canonical	3	48	junction_8	6.78232998312527	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	68691461	68938295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346
tx.26513	chr2	+	3915	4	FSM	ENSMUSG00000042155.4	ENSMUST00000053087.4	4617	4	129	573	129	-573	multi-exon	FALSE	canonical	0	0	junction_1	4.78423336480244	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTAATTGTAGGCTAT	5601	False	NA	NA	False	NA	NA	NA	69652842	69666422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_69652987_69654130_69655345_69659189_69659343_69664018
tx.26514	chr2	+	2872	10	NIC	ENSMUSG00000041921.17	novel	2770	9	NA	NA	-2	-6	intron_retention	TRUE	canonical	3	4	junction_1	25.5342906696074	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCAAACCTATTGTGTC	NA	False	NA	NA	False	NA	NA	NA	71283674	71355529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_71283743_71331122_71331214_71337128_71337287_71340084_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
tx.26515	chr2	+	3682	3	NIC	ENSMUSG00000041921.17	novel	2770	9	NA	NA	5147	0	intron_retention	FALSE	canonical	3	67	junction_1	1.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTCCAGTCTGTA	2377	False	NA	NA	False	NA	NA	NA	71350902	71355538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_71354194_71355060_71355140_71355226
tx.26516	chr2	+	3185	3	FSM	ENSMUSG00000041911.4	ENSMUST00000037119.4	4111	3	927	-1	-61	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTGCCTCCTGTGCTGT	2733	False	NA	NA	False	NA	NA	NA	71359383	71364325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_71360651_71361300_71361501_71362607
tx.26517	chr2	-	3162	2	Antisense	novelGene_ENSMUSG00000087570.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAACTTTGAGGCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	71575635	71571134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_71573970_71575308
tx.26518	chr2	-	854	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	-32	-72	-32	72	mono-exon	FALSE	NA	NA	NA	NA	NA	2	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTGTCAAATGGCAC	NA	False	NA	NA	False	NA	NA	NA	75022198	75021344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_75021300_75022200
tx.2652	chr11	-	5411	5	FSM	ENSMUSG00000044296.11	ENSMUST00000049625.2	2408	5	38	-3041	32	3037	multi-exon	FALSE	canonical	0	0	junction_2	1.08972473588517	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATTGTATCTTATATCT	NA	False	NA	NA	False	NA	NA	NA	50732341	50719820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_50724799_50728736_50728833_50729236_50729364_50731352_50731418_50732196
tx.26520	chr2	+	1673	4	NIC	ENSMUSG00000025838.13	novel	1540	3	NA	NA	-32	2	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	1.63299316185545	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTGCATCTCCATCAG	NA	False	NA	NA	False	NA	NA	NA	87336876	87341218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_87336974_87338774_87339089_87339524_87340113_87340544
tx.26521	chr2	+	1308	3	Genic_Genomic	ENSMUSG00000082908.5	novel	253	1	NA	NA	-84	43107	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTCCCCCTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	87356404	87399848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr2_+_87356560_87372798_87372937_87398833
tx.26522	chr2	+	183	2	Antisense	novelGene_ENSMUSG00000083688.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAGGGACATACATAAAT	NA	False	NA	NA	False	NA	NA	NA	87371778	87428101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_+_87371945_87428084
tx.26523	chr2	-	4298	2	ISM	ENSMUSG00000063235.19	ENSMUST00000155621.4	744	4	-91	-268	-18	-13	intron_retention	FALSE	canonical	3	376	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCCCCTGGCCCTGTGG	NA	False	NA	NA	False	NA	NA	NA	90748031	90741069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_90741664_90744327
tx.26524	chr2	+	7849	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	222.666585196938	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	2365	False	NA	NA	False	NA	NA	NA	90770789	90849839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
tx.26525	chr2	+	1160	4	NNC	ENSMUSG00000002111.9	novel	544	4	NA	NA	8984	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	12.9614813968157	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGTGTCTCATTCAAGA	NA	False	NA	NA	False	NA	NA	NA	90936108	90946102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_90936229_90943599_90943791_90944589_90944756_90945419
tx.26526	chr2	+	3391	23	NIC	ENSMUSG00000002100.16	novel	4163	35	NA	NA	4625	-1	intron_retention	FALSE	canonical	0	0	junction_2	2.53243423221529	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGATGTCTCCTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	90953113	90966860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_90953364_90954230_90954364_90954619_90954854_90954931_90955038_90955121_90955289_90955603_90955770_90956290_90956398_90956608_90956639_90958997_90959138_90959344_90959426_90961131_90961292_90961717_90961823_90961908_90962098_90962983_90963119_90963197_90963366_90964515_90964605_90964758_90964955_90965134_90965275_90965436_90965597_90965691_90965829_90966080_90966268_90966448_90966487_90966587
tx.26527	chr2	-	3837	5	NIC	ENSMUSG00000075040.10	novel	663	5	NA	NA	6	-7	intron_retention	FALSE	canonical	2	7	junction_4	6.87386354243376	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAAGCCAGTGTGGCCA	NA	False	NA	NA	False	NA	NA	NA	91480130	91474020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479280_91479372_91479495
tx.26528	chr2	-	4253	7	NIC	ENSMUSG00000075028.13	novel	3744	8	NA	NA	-140	1011	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	1.59861050777091	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTGTTTTCATCTTTA	NA	False	NA	NA	False	NA	NA	NA	92876652	92801351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_92804528_92810855_92811044_92823708_92823777_92842971_92843235_92843657_92843762_92844109_92844235_92876323
tx.26529	chr2	-	3235	8	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-4	2	intron_retention	FALSE	canonical	3	37	junction_3	41.0017421232666	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATTTGATCCAAAAGC	8871	False	NA	NA	False	NA	NA	NA	93841079	93810979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787
tx.2653	chr11	-	4566	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	4	1445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.0784379834192	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAACTGTGTCGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	50806988	50788093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801576_50801704_50803106_50803229_50806935
tx.26530	chr2	+	1674	4	FSM	ENSMUSG00000032698.16	ENSMUST00000111143.8	1654	4	2	-22	2	-1	multi-exon	FALSE	canonical	1	2	junction_1	5.71547606649408	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTTCTTGATGTGAA	4483	False	NA	NA	False	NA	NA	NA	103800475	103812222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_103800711_103800837_103801058_103806349_103806566_103811219
tx.26531	chr2	+	3619	5	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	-8	-18	intron_retention	FALSE	canonical	2	8	junction_1	105.21644358179	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTATTTGATCTGGAA	NA	False	NA	NA	False	NA	NA	NA	103926176	103945676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_103928190_103928356_103928422_103934515_103934595_103941084_103941190_103944319
tx.26532	chr2	+	189	2	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGAAGTTTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	105192384	105195096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_105192396_105194918
tx.26534	chr2	+	906	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	36	-4723	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	188.575415948103	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTATCTTCTGTTTTT	396	False	NA	NA	False	NA	NA	NA	112285377	112297784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_112285485_112289804_112289925_112293145_112293285_112295081_112295163_112297325
tx.26535	chr2	-	2955	11	ISM	ENSMUSG00000027210.21	ENSMUST00000028639.13	2831	12	1252	5	673	-5	3prime_fragment	FALSE	canonical	0	0	junction_2	17.5809556054271	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	276	False	NA	NA	False	NA	NA	NA	115894276	115693549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668
tx.26536	chr2	+	1913	11	NIC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	37.2821673189744	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGATGTTTTTTCTGT	281	False	NA	NA	False	NA	NA	NA	119039484	119047529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042110_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
tx.26537	chr2	+	8182	6	NIC	ENSMUSG00000027296.8	novel	1818	7	NA	NA	-36	0	intron_retention	FALSE	canonical	3	155	junction_3	8.97997772825746	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	NA	False	NA	NA	NA	119572781	119581744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
tx.26538	chr2	+	7226	30	FSM	ENSMUSG00000033902.13	ENSMUST00000066058.8	6942	30	-297	13	-297	-13	multi-exon	FALSE	canonical	2	8	junction_8	4.52526268609031	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCTAGCAAATTCTGAG	3108	False	NA	NA	False	NA	NA	NA	119802882	119857876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
tx.26539	chr2	+	3480	6	ISM	ENSMUSG00000033902.13	ENSMUST00000066058.8	6942	30	49693	17	331	-17	3prime_fragment	FALSE	canonical	3	12	junction_2	5.8172158288996	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACCTGCTAGCAAATTC	8935	False	NA	NA	False	NA	NA	NA	119852872	119857872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
tx.2654	chr11	-	3040	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	23.8109218637162	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	NA	False	NA	NA	NA	50806988	50789538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801576_50801704_50803106_50803229_50806935
tx.26540	chr2	+	1352	8	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-8	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	55.0810163971848	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCTCATGTTCCCCGT	NA	False	NA	135	True	NA	NA	NA	119857976	119863079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119861982_119862133_119862321_119862482_119862594
tx.26541	chr2	-	1076	6	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.46838465151849	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTCTGGTAAGTTCAA	NA	False	NA	NA	False	NA	NA	NA	121244289	121224837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_121224969_121227433_121227602_121240618_121240688_121240857_121241032_121242630_121242772_121243896
tx.26542	chr2	-	1550	7	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	5.52016505389306	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATTTCTGGTAAGTTC	NA	False	NA	NA	False	NA	NA	NA	121244281	121224839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_121224969_121227433_121227602_121227941_121228370_121236809_121236935_121240857_121241032_121242630_121242772_121243896
tx.26543	chr2	-	1718	11	NNC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.7994185981002	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAGCCTTTATCATCCA	NA	False	NA	NA	False	NA	NA	NA	121273096	121269495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_121270031_121270107_121270153_121270328_121270519_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
tx.26544	chr2	-	1844	9	NIC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	-17	1	intron_retention	FALSE	canonical	3	70	junction_3	8.70254991367473	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGCGATCATTAGCC	NA	False	NA	NA	False	NA	NA	NA	121273099	121269506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_121270153_121270328_121270501_121270596_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
tx.26545	chr2	-	1783	14	ISM	ENSMUSG00000027238.18	ENSMUST00000155570.8	1861	15	173343	3	-5332	0	3prime_fragment	FALSE	canonical	2	5	junction_1	8.17486405800512	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGATTGCAGTAGTG	NA	False	NA	NA	False	NA	NA	NA	121422246	121378787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_121379191_121379369_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138
tx.26546	chr2	+	2115	7	NIC	ENSMUSG00000118663.1	novel	2347	8	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	3.21455025366432	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTAGTTTGCAAGTT	NA	False	NA	NA	False	NA	NA	NA	122461126	122474718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122472613_122472745_122473758_122473885_122474529
tx.26547	chr2	-	5588	6	FSM	ENSMUSG00000005802.13	ENSMUST00000099457.4	3170	6	-262	-2156	-262	-9	multi-exon	FALSE	canonical	2	3	junction_5	4.53431361950185	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTAATTGTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	122544845	122523161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122543949
tx.26548	chr2	-	2369	8	ISM	ENSMUSG00000027204.14	ENSMUST00000028633.13	9847	66	193455	1	193142	-1	3prime_fragment	FALSE	canonical	0	0	junction_5	1.57790871674104	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGCTTTGTTATCTGT	NA	False	NA	NA	False	NA	NA	NA	125154850	125142514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_125143896_125145005_125145181_125148189_125148422_125150389_125150510_125151300_125151430_125151676_125151794_125154419_125154543_125154758
tx.26549	chr2	-	4987	7	ISM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	29887	7	-719	-7	3prime_fragment	FALSE	canonical	3	54	junction_6	10.3239204439657	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGAATTTCTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	125594903	125578912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733
tx.2655	chr11	-	3042	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	22.9120055865915	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	NA	False	NA	NA	NA	50806987	50789538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801576_50801704_50803106_50803232_50806935
tx.26550	chr2	-	1945	4	ISM	ENSMUSG00000027364.15	ENSMUST00000028842.9	1361	7	2950	13014	2944	3254	internal_fragment	FALSE	canonical	3	6	junction_1	2.49443825784929	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGGCTATATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	126622414	126616354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_126617787_126619818_126620029_126621850_126622047_126622307
tx.26551	chr2	+	2275	4	ISM	ENSMUSG00000001999.16	ENSMUST00000142737.3	676	6	251	3397	251	879	internal_fragment	FALSE	canonical	3	175	junction_1	9.10433352249844	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCGTCCTGGGATTCAT	NA	False	NA	NA	False	NA	NA	NA	126922447	126930669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_126922579_126924851_126924971_126927882_126928003_126928764
tx.26552	chr2	-	318	2	FSM	ENSMUSG00000044145.3	ENSMUST00000150956.2	2364	2	1	2045	1	-2045	multi-exon	FALSE	canonical	3	36	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTAGATCTTCTCTCG	NA	False	NA	NA	False	NA	NA	NA	127050173	127046531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_127046771_127050094
tx.26553	chr2	-	2909	5	ISM	ENSMUSG00000034800.16	ENSMUST00000110366.8	4912	6	2398	717	-19	154	3prime_fragment	FALSE	canonical	0	0	junction_4	13.4536240470737	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGTGTATGAGTGTC	NA	False	NA	NA	False	NA	NA	NA	127426616	127417298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426585
tx.26554	chr2	-	8488	2	ISM	ENSMUSG00000034800.16	ENSMUST00000077422.12	2765	5	-6	-3	-6	3	intron_retention	FALSE	canonical	3	30	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTGAAGTGTCTCTA	NA	False	NA	NA	False	NA	NA	NA	127426603	127417456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_127419865_127420523
tx.26555	chr2	-	2198	5	NNC	ENSMUSG00000027377.3	novel	2006	4	NA	NA	-823	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	23.2849200127464	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTGGAGTCTATCGC	NA	False	NA	NA	False	NA	NA	NA	127572675	127546309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_127547844_127550756_127550880_127554188_127554357_127571675_127571900_127572526
tx.26556	chr2	-	824	2	ISM	ENSMUSG00000027377.3	ENSMUST00000028856.3	2006	4	20988	822	20988	-822	3prime_fragment	FALSE	canonical	3	64	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCTGGGTTTGGGGA	NA	False	NA	NA	False	NA	NA	NA	127550864	127547127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_127547844_127550756
tx.26557	chr2	-	2289	20	NNC	ENSMUSG00000027378.17	novel	2260	20	NA	NA	-18	14	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_12	19.8002490261068	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCTTCAAAATATCAAT	2816	False	NA	NA	False	NA	NA	NA	127630792	127582637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610176_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
tx.26558	chr2	+	4907	5	FSM	ENSMUSG00000027381.17	ENSMUST00000103210.2	3538	5	-51	-1318	-39	-1	multi-exon	FALSE	canonical	3	10	junction_1	9.78199877325692	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTGTTCGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	127967918	128004466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_127968173_127970539_127970677_127970844_127970935_127989004_127989115_128000150
tx.26559	chr2	-	2657	2	FSM	ENSMUSG00000074813.15	ENSMUST00000239199.2	1105	2	473	-2025	-5	2025	multi-exon	FALSE	canonical	3	13	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTGTGCTTAAGTT	NA	False	NA	NA	False	NA	NA	NA	128271318	128211995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_128214348_128271013
tx.2656	chr11	-	3085	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	19.4668949758301	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	NA	False	NA	NA	NA	50806989	50789538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
tx.26560	chr2	+	5807	18	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	8	-1	intron_retention	FALSE	canonical	1	36	junction_11	25.8501136110158	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	NA	False	NA	NA	NA	128660230	128696180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128688720_128690924_128690978_128692223_128692255_128693203
tx.26561	chr2	-	2401	8	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	57	-1	intron_retention	FALSE	canonical	3	222	junction_7	21.296737318382	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	NA	False	NA	NA	NA	128785940	128768188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_128768732_128770806_128770849_128771766_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
tx.26562	chr2	-	2667	8	NNC	ENSMUSG00000037773.15	novel	1689	8	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	11.0250179323284	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTTTGGTTTGTT	8049	False	NA	NA	False	NA	NA	NA	130266206	130260143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331_130265473_130265768
tx.26563	chr2	-	2779	6	NNC	ENSMUSG00000048911.16	novel	5978	6	NA	NA	1	-423	intron_retention	FALSE	canonical	0	0	junction_1	6.11882341631134	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTATTTGGACCTGT	NA	False	NA	NA	False	NA	NA	NA	131194781	131140409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_131140880_131144303_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
tx.26564	chr2	+	5209	9	NIC	ENSMUSG00000027281.17	novel	5089	8	NA	NA	85	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	9.69535971483266	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAGTTTGTTGTGCAA	NA	False	NA	NA	False	NA	NA	NA	136734172	136913867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_136734282_136747462_136747521_136788961_136789170_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
tx.26565	chr2	-	2083	7	NIC	ENSMUSG00000039033.12	novel	2127	13	NA	NA	2	315	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	30.799080072842	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTATTTTCTCAGTATGT	NA	False	NA	NA	False	NA	NA	NA	139908703	139818136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_139819634_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
tx.26566	chr2	+	1043	11	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	-16	4	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	69.9549140518377	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	140012616	140045556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030656_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
tx.26567	chr2	+	4870	14	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	3.96433806976158	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCAGTTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	145517290	145729531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_145517505_145519003_145519100_145554374_145554499_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
tx.26568	chr2	-	4470	7	ISM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	177388	1417	53067	-1417	3prime_fragment	FALSE	canonical	3	25	junction_1	4.78423336480244	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTGATTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	146176536	146083215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411
tx.26569	chr2	-	2313	10	NIC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	33.5227948980657	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTGCTGATTATTAC	1010	False	NA	NA	False	NA	NA	NA	150450476	150425000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150441647_150441738_150442163_150442281_150450307
tx.2657	chr11	-	3101	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	17.9710878913882	22	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	NA	False	NA	NA	NA	50807002	50789538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
tx.26570	chr2	+	2280	5	FSM	ENSMUSG00000027454.11	ENSMUST00000140950.8	648	5	-17	-1615	6	167	multi-exon	FALSE	canonical	3	394	junction_1	29.583568074186	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTCCCTGGAATGAATC	2428	False	NA	NA	False	NA	NA	NA	150751519	150769632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801
tx.26571	chr2	-	1570	2	NNC	ENSMUSG00000053916.5	novel	1394	2	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTCATCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	150881275	150871616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_150872837_150880925
tx.26573	chr2	+	4137	18	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	164	junction_2	166.868304785146	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCCTTGGTCATG	2733	False	NA	NA	False	NA	NA	NA	152689922	152737240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
tx.26574	chr2	+	4564	6	NIC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	22771	-10	intron_retention	FALSE	canonical	3	76	junction_2	5.67802782663136	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTCCCCAAGGGTCAGC	5215	False	NA	NA	False	NA	NA	NA	152973158	152993349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
tx.26575	chr2	-	1956	2	FSM	ENSMUSG00000073236.5	ENSMUST00000128026.2	1898	2	-385	327	-122	-327	multi-exon	FALSE	canonical	2	5	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGCTAAAAAATTGCAT	8890	False	NA	NA	False	NA	NA	NA	153188115	153183403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_153184785_153187540
tx.26577	chr2	-	2434	8	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	453.49652924892	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9540	False	NA	NA	False	NA	NA	NA	154411774	154401553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_154402318_154402350_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
tx.26579	chr2	+	6442	10	NIC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	-2080	0	intron_retention	FALSE	canonical	3	55	junction_2	26.5362551899505	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	155825722	155840820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
tx.2658	chr11	-	3168	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.6887462097269	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	NA	False	NA	NA	NA	50806988	50789538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
tx.26581	chr2	-	176	2	Antisense	novelGene_ENSMUSG00000038116.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGATTTATTTTATG	NA	False	NA	NA	False	NA	NA	NA	156064864	156029396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr2_-_156029426_156064717
tx.26582	chr2	+	3547	21	FSM	ENSMUSG00000027624.21	ENSMUST00000109574.8	5904	21	-7	2364	-7	864	multi-exon	FALSE	canonical	3	16	junction_12	32.516303602962	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCTGACTGTGATTGA	7773	False	NA	NA	False	NA	NA	NA	156262960	156382770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
tx.26583	chr2	+	3863	3	ISM	ENSMUSG00000027624.21	ENSMUST00000137067.2	820	5	3213	-3228	3213	0	3prime_fragment	FALSE	canonical	3	146	junction_2	11	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	7377	False	NA	NA	False	NA	NA	NA	156378639	156385134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_156378981_156379286_156379404_156381729
tx.26585	chr2	-	1623	2	NNC	ENSMUSG00000087445.2	novel	464	2	NA	NA	-214	949	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTCCATATGTATAAA	NA	False	NA	NA	False	NA	NA	NA	157387603	157385236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_157386349_157387092
tx.26586	chr2	+	4530	3	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTATTTTATGTATGT	NA	False	NA	NA	False	NA	NA	NA	157516795	157524539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_157518583_157519235_157519341_157521901
tx.26587	chr2	+	1338	3	NIC	ENSMUSG00000037843.7	novel	1363	4	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGCAGTGCCTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	157756546	157786639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_+_157756852_157777244_157777415_157785776
tx.26588	chr2	-	6008	4	FSM	ENSMUSG00000085385.8	ENSMUST00000149667.8	3896	4	-29	-2083	0	-2	multi-exon	FALSE	canonical	3	64	junction_3	13.8884444373331	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTCTCGTGAGTTC	8327	False	NA	NA	False	NA	NA	NA	158203462	158195621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_158197962_158199117_158202520_158202862_158202991_158203324
tx.26589	chr2	+	2560	2	FSM	ENSMUSG00000037771.12	ENSMUST00000045738.5	2797	2	236	1	236	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGCCTTCTGTTCACG	NA	False	NA	NA	False	NA	NA	NA	158452922	158457667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_158453552_158455736
tx.2659	chr11	-	3164	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.0203299211285	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	50806988	50789539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
tx.26590	chr2	-	5145	4	FSM	ENSMUSG00000035877.18	ENSMUST00000109460.8	4480	4	-55	-610	-47	610	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGAAGCCTGAACGTT	NA	False	NA	NA	False	NA	NA	NA	160714965	160611756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_160613546_160621320_160624300_160674216_160674339_160714710
tx.26591	chr2	+	1896	3	FSM	ENSMUSG00000109780.2	ENSMUST00000209874.2	1805	3	-87	-4	-87	4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGGTCATGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	160951243	160956782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_+_160951749_160954023_160954240_160955607
tx.26592	chr2	-	5376	3	ISM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	0	0	0	0	intron_retention	FALSE	canonical	3	367	junction_1	11	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTGTGTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	163261448	163247741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_163249010_163253316_163253431_163257454
tx.26593	chr2	-	3527	3	NNC	ENSMUSG00000048486.7	novel	3967	2	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	26.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGGAGTTTGCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	163314570	163308297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_163310338_163310799_163312039_163314322
tx.26594	chr2	-	5283	6	FSM	ENSMUSG00000035226.6	ENSMUST00000044734.3	4962	6	-326	5	-326	-5	multi-exon	TRUE	canonical	0	0	junction_1	1.26491106406735	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTTTTGCTCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	163760929	163701675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_163706042_163706785_163706926_163707372_163707475_163707711_163707825_163721013_163721153_163760506
tx.26596	chr2	+	202	2	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGGGAGGGGCTACTT	NA	False	NA	NA	False	NA	NA	NA	164639279	164678173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_164639426_164678117
tx.26597	chr2	+	2179	7	ISM	ENSMUSG00000017737.3	ENSMUST00000017881.3	3175	13	2565	2	88	-2	3prime_fragment	FALSE	canonical	1	2	junction_1	0.816496580927726	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGTGTGTGTGCA	6671	False	NA	NA	False	NA	NA	NA	164792703	164797768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_164792922_164793026_164793183_164794339_164794674_164794774_164794915_164795183_164795335_164795438_164795543_164796692
tx.26598	chr2	-	2300	7	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	90985	-3	37591	3	3prime_fragment	FALSE	canonical	2	10	junction_5	5.30461015427985	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTTGTGGTTACTAGC	NA	False	NA	NA	False	NA	NA	NA	164985788	164953423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561
tx.26599	chr2	-	4434	12	ISM	ENSMUSG00000017670.17	ENSMUST00000103091.9	4695	21	17026	1112	-6823	12	3prime_fragment	FALSE	canonical	3	281	junction_4	26.8004563918213	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCTCTTCCTCTGCA	NA	False	NA	NA	False	NA	NA	NA	165145720	165131062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860
tx.266	chr1	+	3329	9	FSM	ENSMUSG00000043015.16	ENSMUST00000185483.7	2023	9	-23	-1283	-13	0	multi-exon	FALSE	canonical	3	20	junction_5	9.4794184948234	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	52669882	52691078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682326_52682396_52684419_52684646_52687908_52688086_52688864
tx.2660	chr11	-	7875	5	NIC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	4	-7	intron_retention	FALSE	canonical	3	29	junction_4	20.1308221391974	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGAGTTGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	50806988	50789545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
tx.26600	chr2	-	3840	2	FSM	ENSMUSG00000047030.16	ENSMUST00000147051.2	733	2	282	-3389	282	2	multi-exon	FALSE	canonical	3	54	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCGAAGATTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	167327468	167323050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_167326500_167327077
tx.26601	chr2	+	1103	2	ISM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	811	6	811	-6	3prime_fragment	FALSE	canonical	2	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTGCTCAGTGTTGG	5566	False	NA	NA	False	NA	NA	NA	167380925	167384728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_167381119_167383818
tx.26602	chr2	+	3748	6	ISM	ENSMUSG00000027540.14	ENSMUST00000126839.8	4292	10	35396	4	16720	-4	3prime_fragment	FALSE	canonical	3	103	junction_1	14.5464772367745	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGGCGTGATGTGCTT	NA	False	NA	NA	False	NA	NA	NA	167809687	167821301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
tx.26603	chr2	+	685	2	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTCTGGTATGTGGT	5315	False	NA	NA	False	NA	NA	NA	168236579	168244719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_+_168236722_168244176
tx.26604	chr2	-	5867	6	NNC	ENSMUSG00000052056.15	novel	5670	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	12.9460418661458	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTGTCGTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	169973138	169950565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169972780
tx.26605	chr2	-	3479	3	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	2	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTGCCCATCCCTGCG	NA	False	NA	NA	False	NA	NA	NA	172699002	172690417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_-_172693025_172696403_172696845_172698571
tx.26606	chr2	-	4828	5	FSM	ENSMUSG00000055897.14	ENSMUST00000154908.2	2399	5	-570	-1859	-570	178	multi-exon	FALSE	canonical	3	13	junction_4	4.15331193145904	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGAGATGCTTTCTCTT	3049	False	NA	NA	False	NA	NA	NA	173433676	173426519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580
tx.26607	chr2	-	4731	5	NIC	ENSMUSG00000055897.14	novel	2399	5	NA	NA	-811	-198	intron_retention	FALSE	canonical	2	3	junction_3	7.69740215917033	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCATGTGTATGTTTG	2808	False	NA	NA	False	NA	NA	NA	173433917	173426895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_173428909_173429625_173429715_173430959_173431082_173431297_173431468_173431580
tx.26608	chr2	+	4190	7	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	0	-105	intron_retention	FALSE	non_canonical	0	0	junction_1	43.0790616837874	5	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	173918110	173941458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_+_173918988_173932413_173932522_173933274_173933416_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.26609	chr2	-	2924	3	NNC	ENSMUSG00000086537.8	novel	2248	5	NA	NA	1823	14804	intron_retention	FALSE	canonical	0	0	junction_1	2	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTGTTTGGTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	174125405	174108225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_174108535_174109838_174109963_174122914
tx.2661	chr11	+	5982	6	FSM	ENSMUSG00000061469.4	ENSMUST00000126189.3	1462	6	59	-4579	59	4579	multi-exon	FALSE	canonical	3	10	junction_2	4.24264068711928	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGAGCAAGTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	51111358	51130459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_51111470_51122618_51122914_51123233_51123435_51124291_51124380_51124877_51125184_51125478
tx.26610	chr2	-	6153	4	FSM	ENSMUSG00000078889.12	ENSMUST00000123863.2	267	4	-139	-5747	-7	3861	multi-exon	FALSE	canonical	3	11	junction_1	42.523196284172	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	175592893	175577288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_175583112_175584264_175584326_175584530_175584658_175592751
tx.26611	chr2	+	4109	3	ISM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	8501	-2810	-1754	2518	3prime_fragment	FALSE	canonical	3	176	junction_2	36.5	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGCCGAATAAACCCTT	NA	False	NA	NA	False	NA	NA	NA	177198608	177204074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_+_177198829_177199035_177199097_177200246
tx.26612	chr2	-	4274	14	NIC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-25	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_4	28.5236328881174	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	179618464	179553944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
tx.26613	chr2	-	8591	17	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_15	46.571811149557	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCTCTCTTCACTCA	NA	False	NA	NA	False	NA	NA	NA	180351848	180299756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180351702
tx.26615	chr2	-	4554	6	FSM	ENSMUSG00000027577.15	ENSMUST00000067120.14	4565	6	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_1	2.1540659228538	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTGTGGCCCTGTCTT	1547	False	NA	NA	False	NA	NA	NA	180681087	180664103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr2_-_180666673_180669990_180671366_180675712_180675823_180675901_180675947_180679211_180679364_180680784
tx.26617	chr2	-	4821	9	NIC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	53	junction_4	9.85837207656518	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTGTGTTTGTCTCTTGT	6192	False	NA	NA	False	NA	NA	NA	180929812	180893243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr2_-_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180929676
tx.26618	chr2	-	5547	16	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	21	-4	intron_retention	TRUE	canonical	3	4	junction_15	13.7365691980688	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGATTTTGTGTGGCT	7459	False	NA	NA	False	NA	NA	NA	181234575	181223901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234446
tx.26619	chr2	-	3478	4	ISM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	5	3	5	0	intron_retention	FALSE	canonical	3	47	junction_1	5.71547606649408	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTCAGTGTTGGGTC	1034	False	NA	NA	False	NA	NA	NA	181241000	181237013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220
tx.2662	chr11	+	5102	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-15	1	intron_retention	FALSE	canonical	3	81	junction_2	32.0314927676751	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGTGATTGAGTATTC	NA	False	NA	NA	False	NA	NA	NA	51153961	51172592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_51154097_51157997_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.26620	chr2	-	8597	4	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	1.69967317119759	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTTGTCATGTTATT	4272	False	NA	NA	False	NA	NA	NA	181595001	181581637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_-_181589970_181591081_181591143_181591321_181591403_181594878
tx.26621	chr3	-	6428	2	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-33	132701	-33	-121025	5prime_fragment	FALSE	canonical	3	336	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAATAATTAGACTATA	NA	False	NA	NA	False	NA	NA	NA	9675178	9624780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_9630360_9674329
tx.26622	chr3	-	2341	7	ISM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	1904	-327	1904	-2	3prime_fragment	FALSE	canonical	3	117	junction_2	13.2591687354659	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAGAGTGTTATCAGTG	NA	False	NA	NA	False	NA	NA	NA	10503243	10482878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870
tx.26623	chr3	-	7117	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-215	0	intron_retention	FALSE	canonical	0	0	junction_2	46.8584998507684	3	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	NA	NA	NA	19365701	19277271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_19282006_19283851_19283933_19284419_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
tx.26624	chr3	-	6279	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.0414079614294	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATCAAAGTCTACCTG	NA	False	NA	NA	False	NA	NA	NA	19365507	19277275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_19281970_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
tx.26625	chr3	-	3507	13	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-21	-1351	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	67.3465333595988	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCACTCTACCTTACC	NA	False	NA	NA	False	NA	NA	NA	19365507	19280196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295505_19295683_19297213_19297366_19310941_19311026_19314395_19314457_19365027
tx.26626	chr3	-	6605	2	ISM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	15440	-2834	15378	2834	3prime_fragment	FALSE	canonical	3	56	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	30738539	30730372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_30733533_30735094
tx.26627	chr3	+	6058	8	NNC	ENSMUSG00000027660.17	novel	6578	7	NA	NA	-241	-184	intron_retention	FALSE	canonical	0	0	junction_2	44.8598725284113	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACTCATCTA	NA	False	NA	NA	False	NA	NA	NA	31148965	31176538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603_31172856_31173432
tx.26628	chr3	+	4512	19	NIC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	19	1964	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	8.91471941354422	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTCAATGTTGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	32871738	32989407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_32872022_32891984_32892111_32901958_32902020_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
tx.26629	chr3	-	3566	20	FSM	ENSMUSG00000027676.12	ENSMUST00000029222.8	3606	20	43	-3	43	3	multi-exon	FALSE	canonical	0	0	junction_3	3.55720952604543	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTCTTCTCTGACCA	NA	False	NA	NA	False	NA	NA	NA	33898407	33866507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_33867350_33868338_33868416_33868501_33868679_33868803_33868945_33869560_33869668_33870060_33870221_33870976_33871101_33873956_33874166_33875525_33875664_33879539_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892114_33893226_33893374_33895217_33895338_33898253
tx.2663	chr11	+	1962	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	53.6563688406117	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATTGAGTATTCTTT	NA	False	NA	NA	False	NA	NA	NA	51153966	51172595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.26630	chr3	-	2905	11	ISM	ENSMUSG00000027676.12	ENSMUST00000029222.8	3606	20	43	11715	43	509	5prime_fragment	FALSE	canonical	2	2	junction_3	3.52278299076171	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTATTTTATTTATG	NA	False	NA	NA	False	NA	NA	NA	33898407	33878225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892114_33893226_33893374_33895217_33895338_33898253
tx.26632	chr3	-	1081	5	FSM	ENSMUSG00000050174.16	ENSMUST00000052645.13	1155	5	-6	80	-6	-4	multi-exon	FALSE	canonical	1	4	junction_4	11.8743420870379	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGATTGTAGCTCTAA	NA	False	NA	NA	False	NA	NA	NA	37473751	37459138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473490
tx.26633	chr3	+	1096	3	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	4	40206	4	9952	5prime_fragment	FALSE	canonical	3	18	junction_2	50.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCAGCAGTGATGAAAGT	NA	False	NA	NA	False	NA	NA	NA	40594919	40618998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_40595159_40608135_40608684_40618689
tx.26634	chr3	-	2681	12	NNC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	31	-97	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	9.24237456519188	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTTACTGTTGAAGAT	NA	False	NA	NA	False	NA	NA	NA	40801098	40772634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789694_40791523_40791568_40793848_40793941_40801075
tx.26635	chr3	-	4369	2	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	-1	-1445	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACCCTAGGACTCTTA	NA	False	NA	NA	False	NA	NA	NA	41447626	41439903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_41444169_41447522
tx.26636	chr3	+	6125	2	ISM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	33	3112	33	-3112	intron_retention	FALSE	canonical	3	61	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTGTCTTTCCTAG	NA	False	NA	NA	False	NA	NA	NA	52175789	52257530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_52176844_52252459
tx.26637	chr3	-	6790	2	ISM	ENSMUSG00000042997.14	ENSMUST00000130348.2	4885	6	7054	0	5714	0	3prime_fragment	FALSE	canonical	3	39	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATTGGCTTTATT	NA	False	NA	NA	False	NA	NA	NA	53363690	53356008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_53360071_53360962
tx.26638	chr3	-	4387	4	ISM	ENSMUSG00000042997.14	ENSMUST00000130348.2	4885	6	4716	3	3376	-3	3prime_fragment	FALSE	canonical	3	37	junction_3	1.24721912892465	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAATTTATTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	53366028	53356011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905
tx.26639	chr3	+	4548	11	ISM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	-712	1830	-712	5	intron_retention	FALSE	canonical	3	39	junction_7	8.96437393240599	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCAGACGAGTGGCATA	NA	False	NA	NA	False	NA	NA	NA	53370374	53387346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903
tx.2664	chr11	+	1929	13	FSM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	21	-1	-15	1	multi-exon	FALSE	canonical	3	35	junction_3	48.5840480221875	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGTGATTGAGTATTC	NA	False	NA	NA	False	NA	NA	NA	51153961	51172592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.26640	chr3	-	3453	6	NNC	ENSMUSG00000037016.12	novel	2360	7	NA	NA	1897	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	8.31865373723417	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTTTTTTTAATATT	NA	False	NA	NA	False	NA	NA	NA	53428544	53421357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_53422160_53422191_53422351_53422422_53424463_53426973_53427121_53427324_53427513_53428427
tx.26641	chr3	-	1993	5	FSM	ENSMUSG00000027746.14	ENSMUST00000148338.8	381	5	-41	-1571	32	1571	multi-exon	FALSE	canonical	3	324	junction_3	16.1012421881046	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATTCTCTTGTCAGTAA	NA	False	NA	NA	False	NA	NA	NA	53771151	53763671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034
tx.26643	chr3	+	1202	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	13	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTCAACATGCTTAG	5417	False	NA	NA	False	NA	NA	NA	54388835	54390359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr3_+_54389551_54389872
tx.26644	chr3	+	3606	4	ISM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	30650	863	30650	-863	3prime_fragment	FALSE	canonical	3	10	junction_1	2.62466929133727	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCACATCGTCTTACCT	558	False	NA	NA	False	NA	NA	NA	54693652	54707815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_54693743_54696606_54696829_54701652_54701910_54704778
tx.26645	chr3	-	1618	4	NIC	ENSMUSG00000036513.16	novel	2992	5	NA	NA	11	6	intron_retention	FALSE	canonical	3	528	junction_3	7.84573486395988	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGACAGTTCAATATT	NA	False	NA	NA	False	NA	NA	NA	57559118	57553773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_57554298_57557462_57557637_57558111_57558921_57559007
tx.26646	chr3	+	2875	4	ISM	ENSMUSG00000036503.14	ENSMUST00000197205.5	3244	10	69659	290	4967	-290	3prime_fragment	FALSE	canonical	3	101	junction_3	18.5711843695788	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGTATTGTTCTGGTG	NA	False	NA	NA	False	NA	NA	NA	57713192	57742250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_57714549_57727927_57728022_57740384_57740466_57740906
tx.26647	chr3	+	1745	2	Antisense	novelGene_ENSMUSG00000104093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGCCTCCCCAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	65102793	65104750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr3_+_65103729_65103940
tx.26648	chr3	-	2048	4	NNC	ENSMUSG00000043300.3	novel	2028	3	NA	NA	115	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.3666428910958	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTGTATAGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	69506178	69481518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_69483294_69486658_69486725_69503435_69503599_69506134
tx.26649	chr3	-	4401	11	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	58902	6	58902	6	3prime_fragment	FALSE	canonical	3	35	junction_2	8.6	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAACTTTTCATGAATTG	NA	False	NA	NA	False	NA	NA	NA	78993382	78969828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051
tx.2665	chr11	+	1885	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	39.9666527661916	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	NA	False	NA	NA	NA	51153972	51172591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.26650	chr3	-	2830	12	NNC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	6.52395458836696	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCTTCTTTAGATA	NA	False	NA	NA	False	NA	NA	NA	79750227	79719870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_79721454_79724323_79724378_79728564_79728737_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
tx.26651	chr3	-	3068	11	NNC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	-14	-1	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_2	12.2918672300021	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTCTTTACTGCTAT	NA	False	NA	NA	False	NA	NA	NA	80820935	80750906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_80752565_80757734_80757807_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
tx.26652	chr3	-	3660	6	NIC	ENSMUSG00000033882.16	novel	2115	5	NA	NA	-75	704	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	1.67332005306815	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTGTTTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	82783865	82743830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_82745767_82749780_82749841_82771211_82771995_82772511_82772980_82773792_82773955_82783614
tx.26653	chr3	-	7178	4	ISM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	1	39304	1	-39304	5prime_fragment	FALSE	canonical	3	209	junction_1	3.09120616516523	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGGCCTTGAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	84063092	84034543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_84041474_84045475_84045534_84049005_84049072_84062968
tx.26654	chr3	+	10071	57	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-453	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	6.58846297612388	11	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTGGAAACTGACATTG	NA	False	NA	NA	False	NA	NA	NA	86131533	86689997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
tx.26655	chr3	+	2429	4	NIC	ENSMUSG00000041750.14	novel	1527	6	NA	NA	-5	159	intron_retention	FALSE	canonical	3	18	junction_1	21.9291789378647	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACACAACATATTGGTGA	NA	False	NA	NA	False	NA	NA	NA	86893852	86897246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_86894013_86894294_86895863_86896457_86896555_86896642
tx.26656	chr3	-	5598	6	ISM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	86488	2	86338	-2	3prime_fragment	FALSE	canonical	3	51	junction_1	6.37495098020369	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGTTCTGTGTTATTT	3840	False	NA	NA	False	NA	NA	NA	86995519	86985901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472
tx.26657	chr3	+	6964	3	FSM	ENSMUSG00000003382.19	ENSMUST00000136680.2	7263	3	289	10	278	4	multi-exon	FALSE	canonical	3	40	junction_1	4	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGAGTACTTAAATGTT	NA	False	NA	NA	False	NA	NA	NA	87433202	87447453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_87435415_87436530_87436647_87442817
tx.26658	chr3	+	5849	11	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	162	-13	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	49.0885933797252	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGATACCTCAGT	6902	False	NA	NA	False	NA	NA	NA	88050042	88079380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_88050807_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
tx.26659	chr3	+	3979	10	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	170	-6	intron_retention	FALSE	canonical	3	15	junction_1	44.342104395509	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTACAGATGAGATTCT	6910	False	NA	NA	False	NA	NA	NA	88050050	88077231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_88050807_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
tx.2666	chr11	+	1827	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	35.3321898042513	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	51153977	51172597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_51154097_51157997_51158159_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.26660	chr3	-	1597	3	ISM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	126	2974	23	-2971	5prime_fragment	FALSE	canonical	3	152	junction_2	22.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCCAAAACAAAAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	88204180	88193037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_88194525_88202697_88202758_88204130
tx.26661	chr3	-	189	1	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTCACAGTGCAGTGG	9412	False	NA	NA	False	NA	NA	NA	88489191	88489002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr3_-_88489000_88489200
tx.26662	chr3	+	4287	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	38	0	intron_retention	FALSE	canonical	3	121	junction_5	65.9201871537101	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	8656	False	NA	NA	False	NA	NA	NA	88522711	88555357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.26663	chr3	+	4435	23	FSM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	49	-518	49	0	multi-exon	FALSE	canonical	3	97	junction_1	70.6950294581072	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	9443	False	NA	NA	False	NA	NA	NA	88523498	88555357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.26664	chr3	+	4274	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	NA	False	NA	NA	NA	88528430	88555357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.26665	chr3	+	4239	22	FSM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	1	-2	1	0	multi-exon	FALSE	canonical	3	33	junction_1	79.8674923015028	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	NA	False	NA	NA	NA	88528743	88555357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.26666	chr3	+	902	2	FSM	ENSMUSG00000074466.13	ENSMUST00000145400.8	923	2	587	-566	467	11	multi-exon	FALSE	canonical	3	16	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTTTTTTTTTTTTT	5844	False	NA	NA	False	NA	NA	NA	89299743	89306097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_89299814_89305265
tx.26667	chr3	-	853	3	FSM	ENSMUSG00000028044.7	ENSMUST00000107422.2	766	3	-2	-85	-2	0	multi-exon	FALSE	canonical	3	67	junction_2	1287.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	False	NA	NA	False	NA	NA	NA	89325326	89322778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89323271_89323580_89323709_89325093
tx.26668	chr3	+	5350	9	ISM	ENSMUSG00000027951.17	ENSMUST00000029563.14	3753	15	12891	-2040	-2006	0	3prime_fragment	FALSE	canonical	3	43	junction_1	31.3279028982152	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTTACAAAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	89650945	89660753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_+_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
tx.26669	chr3	+	5455	11	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-17	-7	intron_retention	FALSE	canonical	3	945	junction_10	68.7378352874165	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACCATGGGTTCATG	NA	False	NA	NA	False	NA	NA	NA	89680905	89691300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
tx.2667	chr11	+	3348	11	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	2	3	intron_retention	FALSE	canonical	3	62	junction_2	33.4628151834241	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTGAGTATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	51153992	51172596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_51154097_51157997_51158159_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.26670	chr3	-	3626	10	FSM	ENSMUSG00000027947.12	ENSMUST00000197679.5	8639	10	1	5012	1	253	multi-exon	FALSE	canonical	2	3	junction_6	3.80058475033046	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTCCGGTTTCGTTCACTT	NA	False	NA	NA	False	NA	NA	NA	89820502	89776377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
tx.26671	chr3	+	5661	12	NIC	ENSMUSG00000042390.10	novel	7438	11	NA	NA	26	-1798	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.02681456532513	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTGTGTTATGTCATT	NA	False	NA	NA	False	NA	NA	NA	90200516	90268916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_90200732_90231348_90231402_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
tx.26672	chr3	+	2368	2	NIC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-538	-7	intron_retention	FALSE	canonical	3	396	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGATGCTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	90421203	90431881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_90423350_90431659
tx.26673	chr3	+	1117	3	FSM	ENSMUSG00000074457.11	ENSMUST00000098911.10	1127	3	13	-3	13	0	multi-exon	FALSE	canonical	3	11	junction_1	6	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTGCTTCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	90444573	90450458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_90444725_90449300_90449480_90449671
tx.26674	chr3	-	4220	1	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAGAAAGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	93608685	93604465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr3_-_93604500_93608700
tx.26675	chr3	+	1797	2	Genic_Genomic	ENSMUSG00000060256.2	novel	1113	1	NA	NA	-4791	526	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	93698913	93705343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr3_+_93699034_93703666
tx.26676	chr3	+	4441	9	FSM	ENSMUSG00000005774.13	ENSMUST00000107253.8	4367	9	-64	-10	2	10	multi-exon	FALSE	canonical	3	32	junction_7	4.47213595499958	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCTTTGTGGACATAA	NA	False	NA	NA	False	NA	NA	NA	94861472	94868670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092
tx.26677	chr3	+	2807	10	NNC	ENSMUSG00000038712.17	novel	2800	10	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	56.7019497999065	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGTTCCTACCTTGGA	NA	False	NA	NA	False	NA	NA	NA	95190243	95203476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202613_95202737_95202961
tx.26678	chr3	+	7872	12	NIC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	-26	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	20.6325587201114	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTTGTATTTCATT	NA	False	NA	NA	False	NA	NA	NA	96011812	96068440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_96011941_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
tx.26679	chr3	-	1148	8	FSM	ENSMUSG00000028100.12	ENSMUST00000029742.9	1039	8	-8	-101	0	0	multi-exon	FALSE	canonical	3	11	junction_6	22.7075461699679	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	96615863	96613382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615125_96615203_96615307_96615492_96615643
tx.2668	chr11	+	6047	10	ISM	ENSMUSG00000020385.17	ENSMUST00000109113.8	1627	11	4107	3	4107	-1	3prime_fragment	FALSE	canonical	3	87	junction_1	29.1412058182775	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	51158119	51172590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.26681	chr3	+	3401	2	NNC	ENSMUSG00000004233.15	novel	403	4	NA	NA	2	-49890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	99048389	99062953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_99048505_99059667
tx.26682	chr3	-	2031	2	FSM	ENSMUSG00000044468.15	ENSMUST00000061455.9	5640	2	127	3482	1	-3482	multi-exon	FALSE	canonical	3	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTTAAAGTAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	100396513	100378854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_100380782_100396409
tx.26683	chr3	-	5662	7	ISM	ENSMUSG00000008730.18	ENSMUST00000118317.8	7939	16	38046	4	-2452	-4	3prime_fragment	FALSE	canonical	3	63	junction_1	13.076696830622	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGGCTGGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	103660833	103647134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695
tx.26686	chr3	+	2378	10	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	49.8998997994986	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	False	NA	NA	False	NA	NA	NA	106455138	106482161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_106455237_106457814_106457992_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
tx.26687	chr3	-	4457	4	FSM	ENSMUSG00000027895.11	ENSMUST00000009617.10	3667	4	-793	3	-793	-3	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCATCTGCCTCGCCT	NA	False	NA	NA	False	NA	NA	NA	107367661	107345621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_107346793_107352745_107352950_107354819_107355757_107365516
tx.26688	chr3	-	4669	2	FSM	ENSMUSG00000048796.8	ENSMUST00000106654.2	1914	2	-255	-2500	-16	-2	multi-exon	FALSE	canonical	2	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTATGCTCTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	108108166	108103088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108107032_108107440
tx.26689	chr3	-	2321	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117409.8	2321	11	-33	33	-33	-15	multi-exon	FALSE	canonical	2	3	junction_7	12.8124939024376	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAAACTCTT	3349	False	NA	NA	False	NA	NA	NA	108117835	108109570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114330_108114709_108114921_108115278_108115384_108115755_108115822_108117660
tx.2669	chr11	+	1882	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	8	1226	8	9	multi-exon	FALSE	canonical	3	19	junction_6	4.87054639873415	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTAAGACCCATCAGCA	NA	False	NA	NA	False	NA	NA	NA	51475591	51494090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
tx.26690	chr3	+	4984	27	FSM	ENSMUSG00000033721.17	ENSMUST00000046864.14	5019	27	31	4	1	0	multi-exon	TRUE	canonical	0	0	junction_1	0.566573840871394	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAGTAATTCCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	109247999	109593010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_109248559_109331306_109331424_109402093_109402153_109404203_109404270_109408693_109408803_109410725_109410819_109413711_109413781_109416099_109416204_109418201_109418302_109423303_109423400_109426748_109426818_109428756_109428844_109433184_109433271_109434729_109434863_109435590_109435701_109470058_109470161_109470419_109470521_109481421_109481448_109485634_109485681_109535346_109535484_109554987_109555054_109559101_109559137_109564557_109564675_109565237_109565326_109571619_109571750_109590121_109590274_109590883
tx.26691	chr3	-	750	3	NNC	ENSMUSG00000054426.12	novel	739	3	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	22.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTATGGTGATT	941	False	NA	NA	False	NA	NA	NA	115681746	115675226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_115675488_115679862_115680030_115681424
tx.26692	chr3	-	5913	17	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	29	-311	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	16.4981059518964	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATAGCTGGTCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	122778091	122725452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122763500_122763608_122777930
tx.26693	chr3	+	1393	2	NNC	ENSMUSG00000028023.17	novel	1942	5	NA	NA	3318	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTCTGGATTCTTTC	NA	False	NA	NA	False	NA	NA	NA	129011241	129013237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_129011380_129011982
tx.26694	chr3	+	6433	25	NIC	ENSMUSG00000028030.13	novel	6578	26	NA	NA	-3	-75	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	21.4722042547	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTGTGGTGTATAGGA	NA	False	NA	NA	False	NA	NA	NA	132389901	132547374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_132390156_132392532_132392754_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
tx.26695	chr3	+	2481	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	0	1544	0	-1541	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	NA	False	NA	NA	NA	137849208	137864038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
tx.26696	chr3	-	3539	14	NIC	ENSMUSG00000028149.13	novel	3598	15	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	23.9889027598451	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	138780985	138631665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661220_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
tx.26697	chr3	-	3770	16	NNC	ENSMUSG00000028149.13	novel	3669	15	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.2960210075331	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGATTACTTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	138780999	138631666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138675668_138675737_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
tx.26698	chr3	-	3699	15	FSM	ENSMUSG00000028149.13	ENSMUST00000196280.5	3598	15	-101	0	-37	0	multi-exon	FALSE	canonical	3	17	junction_4	20.5834538265222	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGATTACTTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	138780999	138631666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661220_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
tx.26699	chr3	-	3702	5	ISM	ENSMUSG00000028273.16	ENSMUST00000195975.5	1845	15	132577	-3092	-12682	2	3prime_fragment	FALSE	canonical	3	150	junction_4	19.5879427199489	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCTGGCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	141964992	141945348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890
tx.267	chr1	-	4824	7	FSM	ENSMUSG00000041439.16	ENSMUST00000156876.8	4932	7	90	18	-14	-18	multi-exon	TRUE	canonical	2	6	junction_6	2.05480466765633	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTTGAGAATTTTATA	NA	False	NA	NA	False	NA	NA	NA	52766531	52695462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_52697705_52699965_52700247_52701548_52701648_52702443_52702606_52715636_52715735_52747322_52748915_52766181
tx.2670	chr11	-	2370	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	-2	2	-2	-2	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1545	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGTTCTTGACCTTGA	NA	False	NA	NA	False	NA	NA	NA	51497676	51490928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
tx.26700	chr3	+	3212	2	NIC	ENSMUSG00000106550.2	novel	464	3	NA	NA	-192	-3217	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCTATCATGATGATAAAA	NA	False	NA	NA	False	NA	NA	NA	142587156	142600789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr3_+_142587382_142597802
tx.26701	chr3	-	2179	6	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	20382	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	6.08604962188118	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTATTTCCTTAATCT	NA	False	NA	NA	False	NA	NA	NA	144534736	144528383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672_144533898_144534370
tx.26702	chr3	+	2300	16	NNC	ENSMUSG00000028256.17	novel	913	7	NA	NA	-111	3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	26.9686237443935	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGTCTCGCTATATAT	NA	False	NA	NA	False	NA	NA	NA	144824623	144859679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_+_144824690_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
tx.26703	chr3	-	5544	19	NNC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	55543	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	7.33333333333333	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGTGCACTTTTATGTA	NA	False	NA	NA	False	NA	NA	NA	148604728	148521490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148604642
tx.26704	chr3	-	4094	3	FSM	ENSMUSG00000028035.14	ENSMUST00000050073.13	2464	3	-1771	141	-1771	-114	multi-exon	FALSE	canonical	3	15	junction_1	1.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTACTGTCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	151901253	151889732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr3_-_151891018_151892051_151892621_151899013
tx.26705	chr4	-	3472	5	NNC	ENSMUSG00000028232.14	novel	2690	8	NA	NA	20	-7619	intron_retention	FALSE	canonical	0	0	junction_3	28.3460755661167	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTGTCATGGAATCT	-2	True	NA	NA	False	NA	NA	NA	3574833	3557946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_3560693_3564092_3564258_3569363_3569753_3570330_3570373_3574703
tx.26706	chr4	-	1339	3	NNC	ENSMUSG00000045573.10	novel	721	3	NA	NA	-41	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGATATTGTAAGAACTG	147	False	NA	NA	False	NA	NA	NA	4138860	4133535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_4134508_4138005_4138147_4138634
tx.26707	chr4	+	10912	8	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	12	-9	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	42.9033084685904	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCCTCCTTTCGTGCCT	2	True	NA	NA	False	NA	NA	NA	6191109	6221679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_6191214_6196410_6196515_6198000_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
tx.26708	chr4	+	6585	25	NIC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	-7826	-8	combination_of_known_junctions	FALSE	canonical	3	49	junction_6	12.4707992259251	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTAGTTATAGAATG	9682	False	NA	NA	False	NA	NA	NA	8832495	8867651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
tx.26709	chr4	+	5920	2	NIC	ENSMUSG00000046667.15	novel	3069	3	NA	NA	-4	11	intron_retention	FALSE	canonical	3	63	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCCTGTATTCATTGT	13	False	NA	NA	False	NA	NA	NA	12140280	12146742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_12143460_12144001
tx.2671	chr11	-	1743	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	-1	-305	-1	0	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1654	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTAAATGTGGGATG	NA	False	NA	NA	False	NA	NA	NA	51497675	51491695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
tx.26710	chr4	+	1533	5	FSM	ENSMUSG00000055963.13	ENSMUST00000143186.8	888	5	-34	-611	-34	414	multi-exon	FALSE	canonical	3	8	junction_2	1.6393596310755	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTTACTTTTATGTGTA	2	True	NA	NA	False	NA	NA	NA	12906803	12981484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_12906939_12917915_12918066_12962941_12963024_12974729_12974816_12980404
tx.26711	chr4	+	877	5	NIC	ENSMUSG00000086587.8	novel	876	6	NA	NA	-107	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	17.4928556845359	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGTACAGAATTTTTG	688	False	NA	NA	False	NA	NA	NA	14930553	14953031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14952620
tx.26712	chr4	-	4680	12	Fusion	ENSMUSG00000041135.16_ENSMUSG00000081679.2	novel	2804	12	NA	NA	63	119	multi-exon	TRUE	non_canonical	0	0	junction_1	33.0921578185967	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGCCCAGCCTTAAACA	38	False	NA	NA	False	NA	NA	NA	16163580	16120639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr4_-_16122266_16122303_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
tx.26713	chr4	-	4427	11	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-3	9850	-3	-9850	5prime_fragment	FALSE	canonical	3	133	junction_6	13.7844114854425	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTTAATTTATTTT	-16	True	NA	NA	False	NA	NA	NA	19570111	19529103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
tx.26714	chr4	+	2489	9	NNC	ENSMUSG00000040410.15	novel	2546	9	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	20.0993625520811	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTGTTAAGAATCT	-2	True	NA	NA	False	NA	NA	NA	22357579	22434089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_22357682_22375660_22375753_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
tx.26715	chr4	+	2619	10	FSM	ENSMUSG00000040410.15	ENSMUST00000184582.2	2570	10	-33	-16	12	0	multi-exon	FALSE	canonical	2	2	junction_8	25.9019995414816	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	1	True	NA	NA	False	NA	NA	NA	22357582	22434091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433145_22433259_22433566
tx.26716	chr4	-	2431	11	FSM	ENSMUSG00000040387.17	ENSMUST00000108218.10	7143	11	29	4683	-9	36	multi-exon	TRUE	canonical	1	2	junction_4	2.76405499221705	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCGAGAATTTTGTCA	0	True	NA	NA	False	NA	NA	NA	24851095	24617236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_24617547_24626896_24626992_24629159_24629353_24632642_24632702_24649539_24650267_24682054_24682271_24708952_24709052_24743857_24743966_24792616_24792798_24800805_24800891_24850737
tx.26717	chr4	+	5911	16	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	4	-1072	intron_retention	FALSE	canonical	3	147	junction_6	19.4575321034183	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGCTGGTATGTAGG	-20	True	NA	NA	False	NA	NA	NA	31964100	32022395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
tx.26718	chr4	-	3417	6	NIC	ENSMUSG00000028411.16	novel	5250	8	NA	NA	1	2	intron_retention	FALSE	canonical	3	146	junction_3	6.37495098020369	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGATTGTGTAGTATCT	22	False	40703195	NA	False	NA	NA	NA	40703186	40686239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40697354_40703136
tx.2672	chr11	+	736	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	29	277	-7	8	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	1292	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTGTGGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	51510590	51514264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
tx.26721	chr4	+	2813	4	NNC	ENSMUSG00000036052.15	novel	3093	4	NA	NA	0	-150	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9.93310961716756	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAAAAAAAATGAA	-26	True	NA	NA	False	NA	NA	NA	42949866	42959275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_42950005_42953140_42953386_42956655_42957128_42957317
tx.26722	chr4	-	2300	6	NIC	ENSMUSG00000051517.15	novel	1659	9	NA	NA	15	0	intron_retention	FALSE	canonical	3	106	junction_3	13.6733317081098	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTGTCTAAATCACG	1	True	NA	NA	False	NA	NA	NA	43499646	43496141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_43496721_43496820_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
tx.26723	chr4	-	1458	8	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	27875	-1	13100	1	3prime_fragment	FALSE	canonical	3	264	junction_5	10.2638656838206	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	NA	False	NA	NA	False	NA	NA	NA	43534547	43531517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389
tx.26724	chr4	+	4137	22	FSM	ENSMUSG00002075231.1_ENSMUSG00000028469.16	ENSMUST00000030191.15	3660	22	-477	0	33	0	multi-exon	TRUE	canonical	0	0	junction_1	1.4630753805464	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTGTCATTGTCTGGG	30	False	NA	NA	False	NA	NA	NA	43631457	43651244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_43632852_43633524_43633731_43640139_43640254_43640535_43640672_43640918_43641014_43641193_43641327_43641548_43641634_43643053_43643175_43643334_43643410_43643605_43643684_43644082_43644188_43644307_43644380_43646540_43646701_43646915_43647072_43647148_43647318_43647470_43647618_43648076_43648201_43648346_43648416_43650148_43650324_43650393_43650493_43650707_43650800_43650912
tx.26725	chr4	-	2247	3	Antisense	novelGene_ENSMUSG00000070999.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGTTGATATAACCACA	NA	False	NA	NA	False	NA	NA	NA	43993188	43982654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_-_43984710_43985992_43986071_43993074
tx.26726	chr4	-	4935	12	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-112	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.3178145884907	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	1150	False	NA	NA	False	NA	NA	NA	44168117	44126217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44168094
tx.26727	chr4	-	1992	2	FSM	ENSMUSG00000045973.19	ENSMUST00000132815.3	1005	2	-168	-819	-162	819	multi-exon	FALSE	canonical	3	9	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	-6	True	NA	NA	False	NA	NA	NA	45408928	45398421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_45400180_45408694
tx.26729	chr4	-	2661	5	NIC	ENSMUSG00000035495.16	novel	1547	6	NA	NA	0	321	intron_retention	FALSE	canonical	3	160	junction_4	20.4633819296811	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGAGTAAGAGTATCTGG	-24	True	NA	NA	False	NA	NA	NA	46138455	46123083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
tx.2673	chr11	-	1933	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	14	-1	14	-1	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGATTGCATGGTCTTG	NA	False	NA	NA	False	NA	NA	NA	51526709	51514498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
tx.26730	chr4	-	3871	12	FSM	ENSMUSG00000028337.15	ENSMUST00000107756.4	4154	12	282	1	-26	-1	multi-exon	TRUE	canonical	0	0	junction_3	1.27920429813366	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCAATGCTTGGCGAT	288	False	NA	NA	False	NA	NA	NA	46601920	46536943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_46539268_46540417_46540690_46541892_46541984_46542234_46542348_46543347_46543445_46544062_46544168_46545611_46545729_46546648_46546829_46548767_46548918_46551328_46551446_46562894_46563096_46601816
tx.26731	chr4	+	2056	9	FSM	ENSMUSG00000039774.13	ENSMUST00000107744.2	2077	9	18	3	18	-3	multi-exon	FALSE	canonical	1	1	junction_1	8.53577032258952	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCGTTGATGCCACAGC	-1	True	NA	NA	False	NA	NA	NA	47091940	47123040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_47092329_47108390_47108581_47111455_47111642_47112321_47112440_47113727_47113905_47117903_47118036_47119514_47119629_47120361_47120509_47122436
tx.26732	chr4	+	2484	2	ISM	ENSMUSG00000061455.14	ENSMUST00000064765.6	1531	9	54958	-887	54958	887	3prime_fragment	FALSE	canonical	3	31	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTATTTCTTATC	NA	False	NA	NA	False	NA	NA	NA	48179892	48183118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_48180757_48181498
tx.26733	chr4	+	2987	4	FSM	ENSMUSG00000039634.13	ENSMUST00000042964.13	2835	4	34	-186	-7	186	multi-exon	FALSE	canonical	1	1	junction_1	22.553639765383	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCATTATTTGCT	NA	False	NA	NA	False	NA	NA	NA	49521209	49531703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_49521252_49521422_49521596_49522397_49522483_49529016
tx.26734	chr4	-	2022	2	FSM	ENSMUSG00000039611.3	ENSMUST00000042750.3	2989	2	53	914	53	-914	multi-exon	FALSE	canonical	1	1	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCAGTTGTCTTGG	-16	True	NA	NA	False	NA	NA	NA	49597823	49585419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_49587242_49597623
tx.26735	chr4	+	2914	3	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	6	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGCG	NA	False	NA	NA	False	NA	NA	NA	51871700	51879785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_51871937_51872150_51872299_51877255
tx.26736	chr4	+	4902	2	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACACTTTGAAAATGTTTA	0	True	NA	NA	False	NA	NA	NA	53341419	53347378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_53341538_53342594
tx.26737	chr4	+	6853	7	ISM	ENSMUSG00000054752.17	ENSMUST00000180164.2	7340	13	36511	0	36511	0	3prime_fragment	FALSE	canonical	3	17	junction_6	5.14511634681104	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCATTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	53679790	53707009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
tx.26738	chr4	+	3032	7	NNC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.5818258365143	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	-43	True	NA	NA	False	NA	NA	NA	53826017	53862019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_53826221_53837659_53837803_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
tx.26739	chr4	+	7772	10	NIC	ENSMUSG00000060206.12	novel	10465	13	NA	NA	-1116	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	10.5946643920535	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCATCTGTTAAGT	956	False	NA	NA	False	NA	NA	NA	55010249	55083563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
tx.2674	chr11	-	2539	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-192	20	-192	-20	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	591	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTCTTATGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	51541861	51533909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
tx.26740	chr4	-	3391	11	NIC	ENSMUSG00000055296.15	novel	3576	17	NA	NA	-2	-16760	intron_retention	FALSE	canonical	3	49	junction_7	10.3658091821141	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAGACTCAGTGTATTA	-10	True	NA	NA	False	NA	NA	NA	56947439	56902375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
tx.26741	chr4	+	4805	4	NNC	ENSMUSG00000038729.25	novel	6830	4	NA	NA	-73	-2123	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	6.48074069840786	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGTTTTTATGTTA	NA	False	NA	NA	False	NA	NA	NA	57845173	57894859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_57845333_57854561_57857038_57883023_57883203_57892868
tx.26742	chr4	-	5157	4	ISM	ENSMUSG00000038598.10	ENSMUST00000122832.2	2338	10	23058	-2417	23058	2417	3prime_fragment	FALSE	canonical	3	17	junction_1	0.816496580927726	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTCTGTGGTGACTGA	NA	False	NA	NA	False	NA	NA	NA	59088055	59078714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879
tx.26743	chr4	-	3140	14	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	219	481	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	28.2096965997247	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTCAACTCCAAGG	-29	True	NA	NA	False	NA	NA	NA	59438414	59314201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
tx.26744	chr4	-	5785	7	ISM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	61175	4	-2417	-4	3prime_fragment	FALSE	canonical	3	119	junction_2	26.8974389528487	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTTTTTCTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	59488189	59471871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110
tx.26745	chr4	-	6628	13	ISM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	24888	10	-10128	-10	3prime_fragment	FALSE	canonical	3	119	junction_2	22.6069986705199	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTAAGGTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	59524476	59471877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394
tx.26746	chr4	+	5842	3	NIC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	-14	3545	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	48.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATTCTATTACCTTT	-25	True	NA	NA	False	NA	NA	NA	59626196	59756584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_59626492_59690143_59691339_59752232
tx.26747	chr4	-	4627	4	NIC	ENSMUSG00000038544.15	novel	3237	5	NA	NA	-4	-26	intron_retention	FALSE	canonical	3	236	junction_3	37.1064534668687	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAACAAACAAACAAAAAA	-4	True	NA	NA	False	NA	NA	NA	59783842	59769662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_59772460_59773915_59775550_59782253_59782335_59783727
tx.26748	chr4	+	1752	7	FSM	ENSMUSG00000028392.16	ENSMUST00000030088.12	1757	7	-11	16	-11	-16	multi-exon	FALSE	canonical	3	6	junction_6	6.83130051063973	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAAGACTTGGTAATG	9545	False	NA	NA	False	NA	NA	NA	62398278	62415519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234_62414809_62415218
tx.26749	chr4	-	1131	2	FSM	ENSMUSG00000038422.3	ENSMUST00000037820.3	1205	2	18	56	18	-56	multi-exon	FALSE	canonical	3	14	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCATAGAACTGCGAG	NA	False	NA	NA	False	NA	NA	NA	62420495	62417300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_62418331_62420394
tx.2675	chr11	-	2146	4	ISM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	4615	9	4593	-9	3prime_fragment	FALSE	canonical	3	359	junction_1	6.84754619472471	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTTTGAAAATGGAGGA	NA	False	NA	NA	False	NA	NA	NA	51537054	51533898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753
tx.26750	chr4	-	2208	2	ISM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	2	3	2	-3	intron_retention	FALSE	canonical	3	327	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACTCATACAATGTGC	NA	False	NA	NA	False	NA	NA	NA	62443303	62440888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_62442348_62442554
tx.26751	chr4	-	5235	21	ISM	ENSMUSG00000039158.12	ENSMUST00000035724.5	5387	22	5112	19	5112	-19	3prime_fragment	FALSE	canonical	3	30	junction_5	7.86829079279611	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAAATCCCCAAAGCT	NA	False	NA	NA	False	NA	NA	NA	63316479	63285380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111
tx.26752	chr4	+	2760	2	NNC	ENSMUSG00000086953.2	novel	1104	3	NA	NA	-4247	-6076	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAACTACATTGATAA	NA	False	NA	NA	False	NA	NA	NA	63295347	63306179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_63295476_63303547
tx.26753	chr4	-	4122	12	FSM	ENSMUSG00000039137.19	ENSMUST00000102867.8	4013	12	-108	-1	-68	1	multi-exon	FALSE	canonical	2	8	junction_3	11.3705433554579	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCAGTGTTCTATGCTG	4410	False	NA	NA	False	NA	NA	NA	63414296	63333145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_63333904_63334238_63334362_63334648_63334828_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
tx.26754	chr4	-	4134	13	NIC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	-52	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	13.5428845606179	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGGGGCCAGTGTTCTA	4426	False	NA	NA	False	NA	NA	NA	63414280	63333150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_63333904_63334238_63334362_63334648_63334828_63336324_63336860_63337658_63337731_63347322_63347356_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
tx.26755	chr4	+	1862	7	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-31	4934	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	28.8270706107991	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACACACAATCCCGGAAA	NA	False	NA	NA	False	NA	NA	NA	63477061	63493264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63492179
tx.26756	chr4	+	3121	2	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	66820666	66825840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_66822938_66824990
tx.26757	chr4	-	6180	6	FSM	ENSMUSG00000039270.10	ENSMUST00000107359.9	7924	6	-39	1783	28	-1783	multi-exon	FALSE	canonical	1	2	junction_2	4.93963561409139	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGATTCGTTTCACTTT	NA	False	NA	NA	False	NA	NA	NA	70453204	70347084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_70351769_70353453_70353724_70366899_70367044_70374097_70374238_70406367_70406570_70452464
tx.26758	chr4	-	4528	12	FSM	ENSMUSG00000008575.18	ENSMUST00000107248.8	3294	12	-46	-1188	11	1188	multi-exon	FALSE	canonical	2	7	junction_3	7.01238573660978	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAATAATGTATGC	NA	False	NA	NA	False	NA	NA	NA	82423990	82213096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
tx.26759	chr4	-	1884	7	ISM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	15	20688	15	-13217	5prime_fragment	FALSE	canonical	3	63	junction_1	11.7106314470608	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATACTAGAGTATCAAT	NA	False	NA	NA	False	NA	NA	NA	82777895	82737662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
tx.2676	chr11	+	3452	4	FSM	ENSMUSG00000052563.14	ENSMUST00000064493.6	3426	4	-27	1	-25	-1	multi-exon	FALSE	canonical	3	9	junction_2	4.64279609239471	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCGTTCCTGACTAC	NA	False	NA	NA	False	NA	NA	NA	51541755	51548506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_51542041_51544560_51544699_51544818_51544941_51545599
tx.26760	chr4	-	8463	17	ISM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	60340	160	2124	-160	3prime_fragment	FALSE	canonical	3	157	junction_3	31.6267292017369	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTCCTTTTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	83182152	83138696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930
tx.26761	chr4	-	7461	7	ISM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	81983	161	-9102	-161	3prime_fragment	FALSE	canonical	3	157	junction_3	34.456091220889	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTTTCCTTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	83160509	83138697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375
tx.26762	chr4	-	636	2	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTCTTTTAAAAGATGA	5700	False	NA	NA	False	NA	NA	NA	83260359	83250144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_83250334_83259912
tx.26763	chr4	-	3951	9	NIC	ENSMUSG00000028487.19	novel	3948	7	NA	NA	-4	15	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	4.08503365959205	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTTCTTACAGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	84593319	84193573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_84194685_84196142_84196177_84209500_84209563_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
tx.26764	chr4	+	5436	26	FSM	ENSMUSG00000038070.16	ENSMUST00000047023.13	5528	26	83	9	-12	-5	multi-exon	FALSE	canonical	0	0	junction_2	2.67910432794246	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTCGGTGATGCTCA	NA	False	NA	NA	False	NA	NA	NA	84802628	85050149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_84803062_84806879_84806969_84865794_84865880_84874512_84874648_84875236_84875417_84889367_84889502_84892099_84892263_84897560_84897759_84912865_84913019_84914691_84914818_84923159_84923282_84924641_84924762_84952024_84952126_84964539_84964632_84967840_84968374_84981414_84981593_84985716_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019137_85033501_85033688_85036678_85036757_85048878
tx.26765	chr4	+	5361	3	ISM	ENSMUSG00000038024.18	ENSMUST00000142837.3	5870	31	67261	-1548	63673	0	3prime_fragment	FALSE	canonical	3	62	junction_1	6	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	NA	False	NA	NA	False	NA	NA	NA	86759752	86768840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_86763215_86766194_86766260_86767006
tx.26766	chr4	-	7134	19	NIC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	-1	-111	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	20.8969399378338	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTTGTGGCATATTAAA	NA	False	NA	NA	False	NA	NA	NA	94867316	94830410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
tx.26767	chr4	+	5244	20	NNC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	-12	1915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.58539845492486	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATATTACAATCCTTG	NA	False	NA	NA	False	NA	NA	NA	98284009	98387785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_98284103_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
tx.26768	chr4	+	1799	2	Antisense	novelGene_ENSMUSG00000035407.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTAGCATTTATAGCCA	8917	False	NA	NA	False	NA	NA	NA	98674759	98680032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_98674887_98678360
tx.26769	chr4	-	2786	3	NNC	ENSMUSG00000086096.2	novel	701	2	NA	NA	-2311	10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGGTGCGTAGCGTGAAA	NA	False	NA	NA	False	NA	NA	NA	99545531	99541833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_99542477_99543152_99543220_99543455
tx.2677	chr11	-	817	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	1	-5	1	5	multi-exon	FALSE	canonical	3	574	junction_1	0	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTATGAATGCTTTTCC	5185	False	NA	NA	False	NA	NA	NA	51579479	51576207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51576920_51579374
tx.26770	chr4	-	2864	3	NNC	ENSMUSG00000086096.2	novel	701	2	NA	NA	-2311	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACGGTGCGTAGCGTGA	NA	False	NA	NA	False	NA	NA	NA	99545531	99541835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_99542477_99543072_99543220_99543455
tx.26771	chr4	-	4169	2	NNC	ENSMUSG00000086096.2	novel	701	2	NA	NA	-3020	8	intron_retention	FALSE	canonical	3	10	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACGGTGCGTAGCGTGA	NA	False	NA	NA	False	NA	NA	NA	99546240	99541835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_99543220_99543455
tx.26772	chr4	-	2536	7	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	0	-67	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	78.2206636524021	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTTACTGATATGTCT	NA	False	NA	NA	False	NA	NA	NA	99717423	99653705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99702294_99702338_99717319
tx.26773	chr4	-	2144	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	-185	-304	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	82.4376078235745	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCTTTCCCATGTACA	NA	False	NA	NA	False	NA	NA	NA	99717608	99654442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99717319
tx.26774	chr4	-	2187	3	Antisense	novelGene_ENSMUSG00000028524.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTTGGTTACAACAGT	NA	False	NA	NA	False	NA	NA	NA	102716605	102696987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_-_102698876_102702150_102702386_102716541
tx.26776	chr4	+	3027	6	NIC	ENSMUSG00000028621.18	novel	2516	7	NA	NA	-2	-27	intron_retention	FALSE	canonical	3	9	junction_5	2.78567765543682	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGACAAGTCTTTCC	937	False	NA	NA	False	NA	NA	NA	106924190	106941974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_106926021_106928066_106928216_106931069_106931158_106934872_106934978_106938087_106938292_106941323
tx.26777	chr4	-	1284	3	FSM	ENSMUSG00000028610.17	ENSMUST00000131508.2	704	3	32	-612	32	0	multi-exon	FALSE	canonical	3	6	junction_2	5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGAAAGCTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	107538125	107533488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_107534267_107536449_107536673_107537842
tx.26779	chr4	-	6491	2	ISM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	63727	8	4669	-8	3prime_fragment	FALSE	canonical	3	129	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAAAGTGTGGTCTACT	NA	False	NA	NA	False	NA	NA	NA	108094566	108086928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_108093392_108094538
tx.2678	chr11	-	6411	23	FSM	ENSMUSG00000036391.17	ENSMUST00000038210.12	3800	23	-242	-2369	-15	-2	multi-exon	FALSE	canonical	3	22	junction_16	14.7653827896746	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAAATGTTAGTTATT	3758	False	NA	NA	False	NA	NA	NA	51647280	51583092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620403_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
tx.26780	chr4	-	3666	3	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	91	83126	91	-81333	5prime_fragment	FALSE	canonical	3	18	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAAAAAAAGTTTTTTC	725	False	NA	NA	False	NA	NA	NA	108637904	108577788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_108581110_108584652_108584743_108637649
tx.26781	chr4	+	5238	3	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGAGATGCCTGTG	NA	False	NA	NA	False	NA	NA	NA	109862637	109883517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_109862813_109864517_109864840_109878776
tx.26782	chr4	+	1918	6	FSM	ENSMUSG00000028545.14	ENSMUST00000129760.8	1448	6	-95	-375	-13	-1	multi-exon	FALSE	canonical	2	7	junction_2	5.19230199429887	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACAGTTGTTCTCATTT	NA	False	NA	NA	False	NA	NA	NA	111272189	111317492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_111272598_111288213_111288348_111290283_111290751_111305702_111305852_111311281_111311496_111316946
tx.26783	chr4	+	2447	13	NIC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	31.6318887973654	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTACCTCTGGTATTT	NA	False	NA	NA	False	NA	NA	NA	111577207	111686331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625896_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
tx.26784	chr4	+	2182	11	NIC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	8	-22	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	35.7737333807921	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAATAAAAGAATTATAT	NA	False	NA	NA	False	NA	NA	NA	111577267	111686309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_111577455_111603337_111603476_111604951_111605001_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
tx.26785	chr4	-	5747	29	NIC	ENSMUSG00000003810.14	novel	5292	30	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	46.5144672469255	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8443	False	NA	NA	False	NA	NA	NA	116321424	116163958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
tx.26788	chr4	-	2330	8	NNC	ENSMUSG00000028541.15	novel	2312	8	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	25.0411905565569	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCCCTTGTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	117740687	117730330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_117731201_117734058_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
tx.26789	chr4	+	4151	2	Antisense	novelGene_ENSMUSG00000028538.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAAAAACATGATTTCC	4559	False	NA	NA	False	NA	NA	NA	117853927	117858118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_117856468_117856507
tx.2679	chr11	-	6425	23	FSM	ENSMUSG00000036391.17	ENSMUST00000109097.9	6581	23	155	1	-25	-1	multi-exon	FALSE	canonical	3	47	junction_21	10.4921261307612	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAATGTTAGTTATTG	3748	False	NA	NA	False	NA	NA	NA	51647290	51583091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
tx.26790	chr4	-	6167	11	ISM	ENSMUSG00000033253.19	ENSMUST00000075406.12	10965	72	37347	-4001	1899	4001	3prime_fragment	FALSE	canonical	3	24	junction_4	6.19354502688081	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGAGATGGTCCTTCGT	2663	False	NA	NA	False	NA	NA	NA	118229123	118215938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016
tx.26791	chr4	+	3858	4	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	2	4	intron_retention	FALSE	canonical	3	653	junction_2	34.7083083233203	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCCTTGTCCTATATG	NA	False	NA	NA	False	NA	NA	NA	118266554	118272312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_118269690_118269860_118269943_118270823_118271073_118271920
tx.26792	chr4	-	2574	4	FSM	ENSMUSG00000050854.10	ENSMUST00000128098.8	929	4	-92	-1553	-92	635	multi-exon	FALSE	canonical	2	4	junction_3	2.44948974278318	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAAGCTAAAGGAGCTA	7917	False	NA	NA	False	NA	NA	NA	118401333	118397502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118401129
tx.26793	chr4	-	1858	4	FSM	ENSMUSG00000050854.10	ENSMUST00000060214.10	1864	4	5	1	5	-1	multi-exon	FALSE	canonical	0	0	junction_3	4.18993502999218	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTCTGCACCATGGC	8330	False	NA	NA	False	NA	NA	NA	118400920	118398138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118400796
tx.26794	chr4	+	527	3	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTATAATGCTTCAACT	NA	False	NA	NA	False	NA	NA	NA	118930163	118941597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_118930271_118930792_118930857_118941241
tx.26795	chr4	-	2668	2	FSM	ENSMUSG00000045268.14	ENSMUST00000052715.10	2341	2	-327	0	12	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACTTATTTGGGGA	NA	False	NA	NA	False	NA	NA	NA	119031380	119026709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_119028240_119030242
tx.26796	chr4	+	3002	4	FSM	ENSMUSG00000066058.12	ENSMUST00000094823.4	4168	4	-1417	2583	-1322	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGACATCATCCTATCTG	1983	False	NA	NA	False	NA	NA	NA	119111288	119117052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_119112993_119114082_119114248_119114348_119114434_119116004
tx.26797	chr4	+	1390	3	FSM	ENSMUSG00000028634.18	ENSMUST00000136547.2	1359	3	-42	11	-18	-11	multi-exon	FALSE	canonical	0	0	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGCCAAGCAATGCAT	NA	False	NA	NA	False	NA	NA	NA	119671509	119730523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_119671988_119729233_119729470_119729847
tx.26798	chr4	+	5773	5	ISM	ENSMUSG00000032890.18	ENSMUST00000171363.2	977	6	5208	-5015	5208	-4	3prime_fragment	FALSE	canonical	3	28	junction_3	4.15331193145904	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATGGCTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	120740273	120753772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
tx.26799	chr4	-	1175	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_9	309.335169215497	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	123033739	123020907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033702
tx.268	chr1	-	1820	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	-43	3990	-43	251	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACAGTTCAAGTGGAATG	NA	False	NA	NA	False	NA	NA	NA	52856890	52828575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
tx.2680	chr11	-	5490	21	ISM	ENSMUSG00000036391.17	ENSMUST00000109097.9	6581	23	20175	6	19768	-6	3prime_fragment	FALSE	canonical	3	55	junction_16	8.78564169540279	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTATGAAAATGTTAGT	8610	False	NA	NA	False	NA	NA	NA	51627270	51583096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177
tx.26800	chr4	+	183	2	Antisense	novelGene_ENSMUSG00000028649.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATCTCTCTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	123397740	123431038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_+_123397891_123431005
tx.26802	chr4	-	2567	2	FSM	ENSMUSG00000028648.14	ENSMUST00000106207.8	680	2	-1852	-35	3	35	multi-exon	FALSE	canonical	3	2108	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGTCCTAGTTGCCT	1856	False	NA	NA	False	NA	NA	NA	123611971	123606467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_123606720_123609656
tx.26803	chr4	-	1403	3	NNC	ENSMUSG00000028648.14	novel	599	3	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1053	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTTGCTTTTGGGTC	1892	False	NA	NA	False	NA	NA	NA	123611935	123606503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_123606720_123609656_123609875_123610966
tx.26804	chr4	-	560	3	FSM	ENSMUSG00000028648.14	ENSMUST00000106206.8	599	3	31	8	26	-8	multi-exon	FALSE	canonical	3	65	junction_2	1021.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTTAGTCTGTTTGCTT	1879	False	NA	NA	False	NA	NA	NA	123611948	123606510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_123606720_123609656_123609875_123611815
tx.26805	chr4	+	8534	14	ISM	ENSMUSG00000001985.10	ENSMUST00000030676.8	8973	16	141579	5	141579	-5	3prime_fragment	FALSE	canonical	2	6	junction_11	6.21888705581777	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTCCCTTCCCAAGGTG	NA	False	NA	NA	False	NA	NA	NA	125526071	125607961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689
tx.26806	chr4	-	1835	9	NIC	ENSMUSG00000042500.12	novel	6537	18	NA	NA	-63	3865	intron_retention	FALSE	canonical	1	2	junction_4	2.82566363886433	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACATAAAAATGGTCTTA	2179	False	NA	NA	False	NA	NA	NA	126427328	126405404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_126405912_126406312_126406461_126409679_126409768_126410629_126410765_126410862_126411000_126411168_126411351_126413983_126414105_126419790_126419957_126426977
tx.26807	chr4	-	3474	3	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACTGTGTCTGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	126893222	126885920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_126888823_126891972_126892463_126893140
tx.26808	chr4	-	4699	2	ISM	ENSMUSG00000061894.16	ENSMUST00000084276.12	3962	4	549	5	549	3	3prime_fragment	FALSE	canonical	3	8	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACATTTTGTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	128483206	128477336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_128480638_128481808
tx.2681	chr11	-	6231	22	NIC	ENSMUSG00000036391.17	novel	3800	23	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	2	2	junction_20	20.8558381848958	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTATGAAAATGTTAGT	3763	False	NA	NA	False	NA	NA	NA	51647275	51583096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620403_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51634362_51634828_51646903
tx.26810	chr4	-	4020	9	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	75.4084710095623	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1237	False	NA	NA	False	NA	NA	NA	129083286	129041797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083164
tx.26811	chr4	+	2751	3	NIC	ENSMUSG00000001333.10	novel	2042	5	NA	NA	5464	826	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	3	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTCTATTATGTTTATT	NA	False	NA	NA	False	NA	NA	NA	129186887	129203178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_129188170_129200134_129200260_129201834
tx.26812	chr4	-	559	2	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	130362533	130359667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_-_130360111_130362417
tx.26813	chr4	+	1821	4	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	70	4068	70	1	5prime_fragment	FALSE	canonical	3	62	junction_1	7.58653778449403	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTATGTTTAGT	NA	False	NA	NA	False	NA	NA	NA	130519917	130549562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678
tx.26814	chr4	+	1732	3	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCGTGATTCTTCGTG	NA	False	NA	NA	False	NA	NA	NA	131171051	131175672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_131171168_131173918_131174039_131174176
tx.26815	chr4	+	166	2	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	131905150	132042862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_131905296_132042841
tx.26816	chr4	-	3813	3	ISM	ENSMUSG00000028901.14	ENSMUST00000030733.9	2485	9	20692	-2071	3746	-2	3prime_fragment	FALSE	canonical	3	59	junction_1	1.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAACGCCAACTGATTG	9604	False	NA	NA	False	NA	NA	NA	131958471	131950258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_131953774_131955182_131955306_131958296
tx.26817	chr4	+	1393	6	NNC	ENSMUSG00000028899.12	novel	3787	6	NA	NA	-14	614	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	196.673333220343	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTAGTGTCCATAGGA	NA	False	NA	NA	False	NA	NA	NA	132001709	132020637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_132001869_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
tx.26818	chr4	-	4293	4	NNC	ENSMUSG00000037752.5	novel	4245	3	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.9544984001001	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATTGTTTATTTTCCA	4068	False	NA	NA	False	NA	NA	NA	132459833	132452210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_132455882_132458186_132458384_132458773_132458849_132459483
tx.26819	chr4	+	1282	5	NIC	ENSMUSG00000028865.15	novel	986	6	NA	NA	76	-3	intron_retention	FALSE	canonical	3	38	junction_4	6.80073525436772	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTGACCTATGTCTT	NA	False	NA	NA	False	NA	NA	NA	132948196	132951863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
tx.2682	chr11	-	2143	11	FSM	ENSMUSG00000036391.17	ENSMUST00000064297.5	2104	11	-38	-1	-38	1	multi-exon	FALSE	canonical	3	47	junction_9	12.9015502944414	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGTTTTTTTCAGA	3735	False	NA	NA	False	NA	NA	NA	51647303	51612515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
tx.26821	chr4	-	1897	9	ISM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	35	18052	8	4335	5prime_fragment	FALSE	canonical	3	365	junction_5	45.0692175991552	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTGTGTTCTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	133914388	133875220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
tx.26822	chr4	-	2434	21	FSM	ENSMUSG00000028841.15	ENSMUST00000030645.9	2468	21	34	0	-26	0	multi-exon	TRUE	canonical	0	0	junction_2	2.41816045786875	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGTGTCTTTGCTTTAG	2940	False	NA	NA	False	NA	NA	NA	133965676	133955351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_133955896_133956249_133956432_133956516_133956602_133956692_133956755_133956896_133956974_133957490_133957563_133957722_133957797_133959351_133959525_133959948_133959980_133960057_133960165_133960304_133960364_133960450_133960513_133960596_133960699_133961012_133961076_133961178_133961239_133961799_133961905_133961980_133962023_133962419_133962505_133963181_133963364_133963470_133963629_133965567
tx.26825	chr4	+	3710	5	FSM	ENSMUSG00000070691.11	ENSMUST00000119564.2	1855	5	-46	-1809	-46	0	multi-exon	FALSE	canonical	1	2	junction_2	2.04633819296811	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGCTTCTGGAGTTGTG	6116	False	NA	NA	False	NA	NA	NA	134879760	134905301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_134880368_134882592_134882750_134890541_134890647_134898419_134898570_134902610
tx.26826	chr4	-	938	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	31	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	38.7774096607806	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCTCATTGAGCAGTCT	NA	False	NA	NA	False	NA	NA	NA	135161103	135139622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_135139802_135145690_135145863_135147556_135147731_135152524_135152757_135160922
tx.26827	chr4	-	4195	5	ISM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	25850	2	5681	-2	3prime_fragment	FALSE	canonical	3	53	junction_1	8.40758586040012	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCGGGTCCTGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	135196084	135176204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816
tx.26828	chr4	+	2747	3	NNC	ENSMUSG00000086788.3	novel	2963	3	NA	NA	-8279	-2	intron_retention	FALSE	canonical	1	2	junction_1	2.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAGTGCAATCATTAA	7885	False	NA	NA	False	NA	NA	NA	135345686	135357507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_135345812_135354175_135354357_135355066
tx.26829	chr4	+	4659	28	ISM	ENSMUSG00000037139.16	ENSMUST00000105854.2	5575	37	15701	4	15701	-4	3prime_fragment	FALSE	canonical	2	3	junction_8	2.88793906512858	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCAGCACCCGTGGTC	6729	False	NA	NA	False	NA	NA	NA	135502726	135542871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
tx.2683	chr11	-	2024	8	FSM	ENSMUSG00000036391.17	ENSMUST00000147255.2	2744	8	730	-10	0	10	multi-exon	FALSE	canonical	3	47	junction_6	14.2270222908839	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTAGGTGCCTATATA	3780	False	NA	NA	False	NA	NA	NA	51647258	51619884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
tx.26830	chr4	+	1828	5	ISM	ENSMUSG00000037139.16	ENSMUST00000145304.8	2551	13	10471	-4	8017	4	3prime_fragment	FALSE	canonical	3	9	junction_1	2.1650635094611	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCGTGGTCTCTGAAAT	NA	False	NA	NA	False	NA	NA	NA	135535971	135542879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
tx.26831	chr4	+	975	7	ISM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	1243	2	789	-2	3prime_fragment	FALSE	canonical	3	139	junction_5	9.24511883223911	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGATTCTCACAGATG	7243	False	NA	NA	False	NA	NA	NA	135693718	135695487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
tx.26832	chr4	+	3152	12	NIC	ENSMUSG00000028760.17	novel	3252	13	NA	NA	71	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	4.09595648220684	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATGTGTATGAGCGTT	698	False	NA	NA	False	NA	NA	NA	137720403	137854746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137854043
tx.26833	chr4	+	6722	33	NIC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	-119	-22	intron_retention	FALSE	canonical	1	1	junction_8	5.89814258368683	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAAAGACTTCTCCTT	942	False	NA	NA	False	NA	NA	NA	137720647	137934368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
tx.26834	chr4	+	3201	11	FSM	ENSMUSG00000045349.16	ENSMUST00000105823.2	3529	11	-33	361	8	-361	multi-exon	FALSE	canonical	1	1	junction_1	2.68328157299975	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTTTTCCTGTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	137977741	137988282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_137977820_137980922_137981001_137981141_137981270_137981583_137981665_137982008_137982084_137982862_137983010_137984023_137984276_137984425_137984601_137984915_137985025_137985479_137985640_137986364
tx.26835	chr4	-	3051	3	NIC	ENSMUSG00000043621.14	novel	2757	3	NA	NA	-13	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAAGGCGTCCAATCT	7380	False	NA	NA	False	NA	NA	NA	138452545	138445840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_138448690_138448810_138448959_138452491
tx.26836	chr4	-	2454	5	FSM	ENSMUSG00000028749.8	ENSMUST00000030526.7	2465	5	13	-2	13	2	multi-exon	FALSE	canonical	1	1	junction_4	0.707106781186548	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGTCCTTCTTAGGG	NA	False	NA	NA	False	NA	NA	NA	138484924	138477841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_138479735_138480573_138480684_138481436_138481582_138484017_138484071_138484671
tx.26837	chr4	+	821	4	FSM	ENSMUSG00000028751.14	ENSMUST00000105804.2	786	4	-37	2	-37	-2	multi-exon	FALSE	canonical	3	8	junction_1	6.79869268479038	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTTCCATTATTTCT	NA	False	NA	NA	False	NA	NA	NA	138606633	138610126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_138606808_138607661_138607801_138607980_138608088_138609725
tx.26838	chr4	-	7239	2	Genic_Genomic	ENSMUSG00000078234.7	novel	7807	1	NA	NA	933	803	multi-exon	FALSE	canonical	2	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAAGAAAATACAACAATG	NA	False	NA	NA	False	NA	NA	NA	139694404	139686727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr4_-_139688684_139689121
tx.26839	chr4	-	1478	3	NNC	ENSMUSG00000025328.10	novel	3310	15	NA	NA	14841	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	15.5	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCCTGGGTGTTGGCC	3341	False	NA	NA	False	NA	NA	NA	140516492	140512679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_140513946_140516147_140516274_140516406
tx.2684	chr11	-	2836	2	ISM	ENSMUSG00000036391.17	ENSMUST00000154325.2	4273	3	7149	1012	-47	-1012	3prime_fragment	FALSE	canonical	3	83	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTACTTCCTCAGTT	3726	False	NA	NA	False	NA	NA	NA	51647312	51632400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_51634828_51646903
tx.26840	chr4	+	5404	7	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.2731446809879	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTTTTATTAGTA	NA	False	NA	NA	False	NA	NA	NA	140875234	140931371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_140875491_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
tx.26841	chr4	-	1303	6	ISM	ENSMUSG00000033770.14	ENSMUST00000105790.8	2511	19	8318	0	4941	0	3prime_fragment	FALSE	canonical	3	33	junction_5	1.6	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTTCACCCATCTTC	NA	False	NA	NA	False	NA	NA	NA	141117197	141111920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_141112260_141112587_141112675_141114383_141114468_141114599_141114689_141115444_141115579_141116627
tx.26842	chr4	-	4012	18	NIC	ENSMUSG00000028917.15	novel	4154	20	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	9.75548820782489	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTCGCTGACCCTCTT	7265	False	NA	NA	False	NA	NA	NA	141391475	141353044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369960_141370068_141391171
tx.26843	chr4	-	198	2	Antisense	novelGene_ENSMUSG00000040706.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTAGTCACGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	141480924	141414854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_-_141415003_141480874
tx.26844	chr4	+	2426	2	FSM	ENSMUSG00000028584.4	ENSMUST00000052458.3	2324	2	-106	4	-106	-4	multi-exon	FALSE	canonical	2	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGCCTGTAGTCTATT	NA	False	NA	NA	False	NA	NA	NA	143076220	143097598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_143077382_143096333
tx.26845	chr4	+	2113	4	Fusion	ENSMUSG00000070618.11_ENSMUSG00000095409.2_ENSMUSG00000096154.3	novel	2056	3	NA	NA	-38	2	multi-exon	TRUE	canonical	1	2	junction_1	1.24721912892465	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTATTTTTCCTCA	NA	False	NA	NA	False	NA	NA	NA	143237874	143300370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr4_+_143237929_143281992_143282307_143298345_143298937_143299216
tx.26846	chr4	-	2926	3	ISM	ENSMUSG00000020220.17	ENSMUST00000147511.2	802	4	603	-2301	603	1	3prime_fragment	FALSE	canonical	3	34	junction_2	5.5	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTGGTTTCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	144709928	144699194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_144701839_144703097_144703339_144709887
tx.26847	chr4	-	14876	62	NIC	ENSMUSG00000020220.17	novel	15665	68	NA	NA	-16705	-1	combination_of_known_splicesites	TRUE	canonical	1	4	junction_30	10.6710860458788	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACAGGTTTGGTTTCTTTC	5212	False	NA	NA	False	NA	NA	NA	144898761	144699196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826638_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647
tx.26848	chr4	+	3956	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	13	1178	multi-exon	TRUE	canonical	2	3	junction_5	31.9304800395415	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTATGTCCATCCGCT	NA	False	NA	NA	False	NA	NA	NA	145311785	145557690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr4_+_145311905_145510590_145510684_145516048_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
tx.26849	chr4	-	832	2	Antisense	novelGene_ENSMUSG00000094417.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTTCTGAGCTG	NA	False	NA	NA	False	NA	NA	NA	145501708	145500692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr4_-_145501467_145501650
tx.2685	chr11	+	1195	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	7	-1	0	1	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	264	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTGGGCAGCTGTT	3572	False	NA	NA	False	NA	NA	NA	51654520	51682753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
tx.26850	chr4	-	337	2	NNC	ENSMUSG00000086654.2	novel	252	2	NA	NA	-33935	-38138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATAAACAGTTGCTGTA	NA	False	NA	NA	False	NA	NA	NA	146176237	146142234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_146142303_146175968
tx.26851	chr4	+	6428	12	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_3	35.3915524309273	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTTTTTAAATGCTT	NA	False	NA	NA	False	NA	NA	NA	148123526	148144007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_148123867_148126040_148126287_148127881_148128269_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
tx.26852	chr4	+	4348	16	FSM	ENSMUSG00000028977.18	ENSMUST00000094464.10	4349	16	2	-1	2	1	multi-exon	FALSE	canonical	1	2	junction_1	4.01441845795323	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACAGCTGTCCTCCCTCT	NA	False	NA	NA	False	NA	NA	NA	148888887	149029587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_148888972_148922722_148922878_148974778_148974834_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931_149023780_149025738_149025872_149026123_149026188_149027359_149027515_149027659_149027783_149028714
tx.26853	chr4	-	9621	45	NNC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_40	24.215831768999	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCGTGCTTTAGTCT	7211	False	NA	NA	False	NA	NA	NA	149392178	149260777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354358_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
tx.26854	chr4	+	2324	2	ISM	ENSMUSG00000028988.14	ENSMUST00000105692.2	634	4	1285	-1929	1285	0	3prime_fragment	FALSE	canonical	3	193	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGAGCTGAGCTGGT	1521	False	NA	NA	False	NA	NA	NA	149630858	149650894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_149630950_149648661
tx.26855	chr4	-	4171	19	ISM	ENSMUSG00000039936.19	ENSMUST00000105688.10	4335	25	39289	-647	3968	0	3prime_fragment	FALSE	canonical	3	10	junction_11	4.1785017103275	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	5685	False	NA	NA	False	NA	NA	NA	149743773	149733626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427
tx.26856	chr4	+	1759	7	ISM	ENSMUSG00000062064.7	ENSMUST00000059893.8	1578	12	8858	-554	2	554	3prime_fragment	FALSE	canonical	3	15	junction_6	2.35702260395516	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTCCTCGGCTCCAGC	1364	False	NA	NA	False	NA	NA	NA	150242286	150253493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_150242665_150242931_150243123_150244475_150244587_150247654_150247757_150249565_150249642_150250811_150250940_150252720
tx.26857	chr4	+	3882	6	ISM	ENSMUSG00000062064.7	ENSMUST00000059893.8	1578	12	9394	-2946	538	2946	3prime_fragment	FALSE	canonical	3	15	junction_5	2.57681974534502	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAATATTATTTCAATT	1900	False	NA	NA	False	NA	NA	NA	150242822	150255885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_+_150243123_150244475_150244587_150247654_150247757_150249565_150249642_150250811_150250940_150252720
tx.26858	chr4	+	6084	2	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCCATCTTATTTGTA	NA	False	NA	NA	False	NA	NA	NA	150341920	150351002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_150343864_150346861
tx.26859	chr4	+	2139	3	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCTCTAGTAGCATTAT	NA	False	NA	NA	False	NA	NA	NA	150343755	150353526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_150343864_150346861_150347085_150351718
tx.2686	chr11	-	6243	12	FSM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	29	1	29	-1	multi-exon	FALSE	canonical	2	9	junction_11	3.21926021993196	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCATGACGTTCTG	8377	False	NA	NA	False	NA	NA	NA	51748451	51704282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748137
tx.26860	chr4	-	2533	9	FSM	ENSMUSG00000039838.12	ENSMUST00000037827.10	3387	9	30	824	30	651	multi-exon	FALSE	canonical	0	0	junction_5	1.31695671910659	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGGGTTCGAGGTCATC	NA	False	NA	NA	False	NA	NA	NA	150736601	150713852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_150714255_150715374_150715581_150717769_150717947_150719343_150719498_150722430_150723168_150726902_150727128_150727745_150727839_150728404_150728826_150736483
tx.26861	chr4	-	5570	13	NIC	ENSMUSG00000014592.22	novel	8423	24	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.29114319955671	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATCTGTGTTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	151192993	151143981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151161033_151161055_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
tx.26862	chr4	-	10494	5	NIC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	29	junction_1	424.464662840147	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGAGTGGGCCACTAGT	NA	False	NA	NA	False	NA	NA	NA	151946203	151864911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
tx.26863	chr4	-	2290	10	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	24	junction_9	11.5512812607707	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCTGTTCCTTGGTG	8679	False	NA	NA	False	NA	NA	NA	152112118	152104228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_152104578_152104646_152104736_152105000_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
tx.26864	chr4	+	2313	6	NIC	ENSMUSG00000024793.15	novel	1661	10	NA	NA	408	-8	intron_retention	FALSE	canonical	0	0	junction_2	3.84707681233427	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCAGCTGCTTGGTAT	1246	False	NA	NA	False	NA	NA	NA	152201263	152204560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_152202000_152202096_152202760_152202857_152202957_152203146_152203185_152203616_152203801_152203967
tx.26865	chr4	-	1903	7	NNC	ENSMUSG00000028943.19	novel	1411	8	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.66874967458085	2	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTCTCATTCACTC	NA	False	NA	NA	False	NA	NA	NA	152216274	152204787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_152205723_152208157_152208251_152212525_152212790_152212864_152213011_152215225_152215419_152215508_152215752_152216245
tx.26866	chr4	+	4031	6	FSM	ENSMUSG00000042804.14	ENSMUST00000105651.8	3777	6	-255	1	-125	0	multi-exon	TRUE	canonical	0	0	junction_3	1.85472369909914	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCCTTCTGAGGCTGG	4966	False	NA	NA	False	NA	NA	NA	152358563	152369793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_152358840_152363469_152363938_152364301_152364732_152366222_152366416_152366827_152367013_152367314
tx.26868	chr4	-	3244	4	FSM	ENSMUSG00000078350.12	ENSMUST00000146054.8	707	4	184	-2721	0	-2	multi-exon	FALSE	canonical	3	33	junction_2	2.35702260395516	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCCTGCGTTCAACCT	NA	False	NA	NA	False	NA	NA	NA	154110423	154105046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_-_154107911_154108144_154108349_154109960_154110079_154110365
tx.26869	chr4	+	6892	37	FSM	ENSMUSG00000057751.15	ENSMUST00000030897.15	6851	37	-37	-4	-37	4	multi-exon	FALSE	canonical	0	0	junction_13	2.35636778449428	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCACAGGATCTAGCCT	NA	False	NA	NA	False	NA	NA	NA	154255149	154360174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_154255600_154261495_154261631_154267114_154267225_154308557_154308681_154326858_154326982_154333883_154334010_154335278_154335402_154336585_154336709_154336880_154337019_154337482_154337603_154338171_154338295_154338565_154338737_154338998_154339131_154340452_154340582_154342557_154342687_154343316_154343452_154343537_154343673_154346970_154347097_154347626_154347759_154347849_154347979_154348102_154348235_154349526_154349656_154349743_154349873_154350116_154350246_154350590_154350720_154350907_154351037_154351646_154351776_154351889_154352019_154352112_154352245_154352390_154352520_154353032_154353162_154354103_154354233_154354349_154354479_154354858_154354988_154355079_154355209_154356067_154356197_154358264
tx.2687	chr11	+	1316	4	NNC	ENSMUSG00000020392.9	novel	637	4	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	504.667107001129	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGTTCAAGTTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	51858471	51868163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_51858785_51860970_51861071_51866726_51867028_51867561
tx.26870	chr4	-	3320	7	ISM	ENSMUSG00000039410.17	ENSMUST00000030902.13	8598	17	301733	2351	-211	-2351	3prime_fragment	FALSE	canonical	2	9	junction_6	5.85234995535981	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGTGTGTGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	154419590	154402932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419549
tx.26871	chr4	+	2136	17	NIC	ENSMUSG00000058183.15	novel	2935	24	NA	NA	2585	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	3.15980616494113	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGACTTTGTTTTGTACA	4164	False	NA	NA	False	NA	NA	NA	154969250	154979980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_+_154969499_154970607_154970674_154972083_154972219_154972293_154972384_154973963_154974101_154974384_154974479_154975295_154975425_154975937_154976037_154976400_154976485_154976872_154976977_154977280_154977340_154977688_154977809_154978287_154978422_154978531_154978598_154979053_154979150_154979417_154979495_154979582
tx.26872	chr4	-	2814	5	ISM	ENSMUSG00000029053.17	ENSMUST00000103178.11	4083	15	76622	-7	-815	7	3prime_fragment	FALSE	canonical	3	175	junction_4	23.28626204439	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCCTGTTATTATTT	7787	False	NA	NA	False	NA	NA	NA	155353607	155344578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489
tx.26873	chr4	+	2191	9	NNC	ENSMUSG00000029070.10	novel	2203	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.507497751349	3	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTCTTGGACCTGCT	NA	False	NA	NA	False	NA	NA	NA	155924192	155928545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_+_155924354_155925349_155925666_155925901_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
tx.26874	chr4	+	178	2	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGAGCCGGGCGTG	778	False	NA	NA	False	NA	NA	NA	156015479	156062410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_156015624_156062376
tx.26875	chr4	-	1929	4	NNC	ENSMUSG00000087381.9	novel	810	4	NA	NA	-39	1064	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.49443825784929	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGGTGTTTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	156116139	156109689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr4_-_156111344_156112936_156113012_156114878_156114974_156116034
tx.26876	chr4	-	5692	15	NIC	ENSMUSG00000078485.5	novel	1982	16	NA	NA	-22	919	intron_retention	FALSE	canonical	3	7	junction_2	3.51962428421569	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATATAAGTACATTTCA	NA	False	NA	NA	False	NA	NA	NA	156313021	156304993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156312774_156312865
tx.26877	chr5	-	4933	4	Antisense	novelGene_ENSMUSG00000040274.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATATTCTTATGGTTCA	NA	False	NA	NA	False	NA	NA	NA	3392258	3336559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_-_3340456_3364586_3364785_3380206_3380285_3391497
tx.26878	chr5	+	1561	3	NNC	ENSMUSG00000053178.6	novel	1368	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	NA	NA	NA	4242379	4247651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_4242419_4245994_4246201_4246335
tx.26879	chr5	-	4598	3	ISM	ENSMUSG00000046798.15	ENSMUST00000115446.8	3519	4	467	-5	91	3	3prime_fragment	FALSE	canonical	3	67	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCCTTTTCTCAG	NA	False	NA	NA	False	NA	NA	NA	5564358	5555105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_5558455_5561070_5561123_5563161
tx.2688	chr11	+	1846	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	-14	0	-14	0	multi-exon	FALSE	canonical	3	1066	junction_1	20	854	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGGTTCAAGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	51858473	51868161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_51858785_51860970_51861071_51866726
tx.26880	chr5	-	191	2	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAATAAAAGAATGGCT	NA	False	NA	NA	False	NA	NA	NA	5752743	5751604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_5751650_5752597
tx.26881	chr5	-	1497	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	115	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	NA	False	NA	NA	NA	5833633	5831499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr5_-_5832082_5832718
tx.26882	chr5	+	2718	11	FSM	ENSMUSG00000054099.12	ENSMUST00000170496.6	2602	11	-60	-56	-11	3	multi-exon	FALSE	canonical	2	9	junction_1	12.7342059037853	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGTATTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	8472838	8504792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_8473040_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
tx.26883	chr5	+	4408	11	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	-8	1	intron_retention	FALSE	canonical	3	29	junction_1	8.18840643837371	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCCTGTGTTGGTTTACA	NA	False	NA	NA	False	NA	NA	NA	8472841	8504755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
tx.26884	chr5	+	2795	12	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	16.2389186628557	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGTATTTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	8472853	8504793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_8473040_8474796_8474888_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
tx.26885	chr5	-	3538	9	NIC	ENSMUSG00000040570.15	novel	3677	10	NA	NA	56	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	19.461099018298	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTACTGGTCTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	8672896	8540335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_8542590_8544783_8544906_8570858_8571017_8578605_8578775_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
tx.26887	chr5	+	1775	7	NNC	ENSMUSG00000040118.16	novel	7436	39	NA	NA	-144708	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.21335164821342	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATACTATTAATGTT	NA	False	NA	NA	False	NA	NA	NA	16386274	16473611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_16386387_16399752_16399795_16417873_16418004_16451663_16451796_16469255_16469326_16471684_16471736_16472373
tx.26888	chr5	+	3710	5	ISM	ENSMUSG00000040003.19	ENSMUST00000197443.5	6578	21	1375378	-438	-64	419	3prime_fragment	FALSE	canonical	1	3	junction_4	2.1650635094611	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTATCTTTTGCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	20807430	20910209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_20807520_20814261_20814458_20816042_20816187_20856052_20856192_20907067
tx.26889	chr5	-	3976	5	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	4	210	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	51.0710289694657	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTATGTATTGTAA	NA	False	NA	NA	False	NA	NA	NA	21906388	21867688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906156
tx.2689	chr11	-	4321	2	ISM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	8806	60	8801	-60	intron_retention	FALSE	canonical	3	792	junction_1	0	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCAGTCTCTCTAGTA	NA	False	NA	NA	False	NA	NA	NA	51882505	51876383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_51877638_51879438
tx.26890	chr5	+	2628	13	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	-704	18780	-704	4	5prime_fragment	FALSE	canonical	3	18	junction_10	3.30298686376774	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	23638734	23690453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344
tx.26891	chr5	+	2472	14	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	4	17538	4	297	5prime_fragment	FALSE	canonical	3	18	junction_10	3.24721091064699	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATGTCTTTTCATTAGC	NA	False	NA	NA	False	NA	NA	NA	23639442	23691695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299
tx.26892	chr5	-	3755	3	NIC	ENSMUSG00000105987.5	novel	345	4	NA	NA	2	2	intron_retention	FALSE	canonical	1	2	junction_1	8	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTAGTCTGAGGTCTTC	5259	False	NA	NA	False	NA	NA	NA	23917662	23903291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_23905455_23915363_23915407_23916113
tx.26893	chr5	+	3138	7	NNC	ENSMUSG00000048439.16	novel	2914	7	NA	NA	5	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.829729519122	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAACAATATAGATAAACA	5188	False	NA	NA	False	NA	NA	NA	24370002	24388991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_24370202_24372340_24372564_24374293_24374389_24374775_24375139_24382997_24383085_24386078_24386164_24386905
tx.26894	chr5	+	2792	6	FSM	ENSMUSG00000048439.16	ENSMUST00000115101.4	1624	6	5	-1173	5	-3	multi-exon	FALSE	canonical	2	3	junction_3	25.7013618316229	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGACTGTCTGTTATCT	5188	False	NA	NA	False	NA	NA	NA	24370002	24389008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24382997_24383085_24386078_24386164_24386905
tx.26895	chr5	+	5915	3	ISM	ENSMUSG00000048439.16	ENSMUST00000115101.4	1624	6	9358	-1171	-3546	-5	3prime_fragment	FALSE	canonical	3	52	junction_1	7	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGACTGTCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	24379355	24389006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_24383085_24386078_24386164_24386905
tx.26896	chr5	-	1017	4	ISM	ENSMUSG00000055235.12	ENSMUST00000068693.12	2364	6	12471	527	-2675	0	3prime_fragment	FALSE	canonical	3	12	junction_3	3.29983164553722	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTTTGGTTTTCTTTT	2159	False	NA	NA	False	NA	NA	NA	24923254	24917262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_24917750_24917847_24917952_24920523_24920660_24922964
tx.26897	chr5	+	2279	2	FSM	ENSMUSG00000104667.2	ENSMUST00000197982.2	2249	2	-30	0	-30	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGCTCTGGAGCACCA	NA	False	NA	NA	False	NA	NA	NA	30297907	30302684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_30298047_30300544
tx.26899	chr5	+	2055	5	NIC	ENSMUSG00000053856.8	novel	1565	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	16	junction_4	4.32290411644765	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGTGTGTGTGGGAC	NA	False	NA	NA	False	NA	NA	NA	31265662	31269868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_31265766_31266230_31267053_31267521_31267664_31268456_31268524_31268947
tx.269	chr1	+	1712	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-6	124	-4	-119	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTGTGTTGATGCCTTA	NA	False	NA	NA	False	NA	NA	NA	52884198	52960021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
tx.2690	chr11	-	1710	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	19	63	14	-63	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGCAGTCTCTCTA	NA	False	NA	NA	False	NA	NA	NA	51891292	51876386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
tx.26901	chr5	+	7894	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	33.3637361350447	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGCCACCTACTTTC	2005	False	NA	NA	False	NA	NA	NA	33021056	33151570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
tx.26902	chr5	+	2344	14	NNC	ENSMUSG00000037355.15	novel	7326	14	NA	NA	10	4390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.72181630968525	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCTGTGGTCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	33535902	33572253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_33536073_33536569_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152_33566325_33566770_33566894_33568202_33568387_33568904_33569017_33571242_33571418_33572141
tx.26903	chr5	-	4588	2	ISM	ENSMUSG00000019295.9	ENSMUST00000140931.2	2369	4	-3	-2	-3	-1	intron_retention	FALSE	canonical	3	72	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTTCATTTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	33815246	33810560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_33811959_33812056
tx.26904	chr5	+	2936	13	FSM	ENSMUSG00000054520.16	ENSMUST00000067638.14	2885	13	-74	23	-66	-7	multi-exon	FALSE	canonical	0	0	junction_5	1.59861050777091	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTATTATTTTTATGC	NA	False	NA	NA	False	NA	NA	NA	34683115	34720962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_34683246_34708904_34709045_34710080_34710184_34712800_34712919_34713285_34713357_34714234_34714324_34714638_34714708_34716344_34716994_34717687_34717797_34718032_34718089_34718369_34718452_34718946_34719007_34719702
tx.26905	chr5	+	5578	16	NIC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	0	2	intron_retention	FALSE	canonical	2	8	junction_14	4.54899256246186	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGACTGGCTGGAAACT	8631	False	NA	NA	False	NA	NA	NA	35106788	35190788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
tx.26906	chr5	+	1807	2	FSM	ENSMUSG00000067438.6	ENSMUST00000087674.6	1526	2	-282	1	-273	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTCGCAGCTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	35546178	35550233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_35546834_35549081
tx.26907	chr5	+	6182	18	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	-21	-3	intron_retention	FALSE	canonical	3	17	junction_2	12.9785556428439	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCCTGCTTTCTCCCCT	NA	False	NA	NA	False	NA	NA	NA	35740362	35771142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35740479_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079
tx.26908	chr5	+	3989	19	NNC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	18.2513317626718	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTTTCTCCCCTG	NA	False	NA	NA	False	NA	NA	NA	35740385	35771143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_35740479_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762529_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
tx.26909	chr5	+	3766	4	FSM	ENSMUSG00000029098.18	ENSMUST00000154796.2	666	4	-1144	-1956	-1144	-1	multi-exon	FALSE	canonical	3	57	junction_1	2.82842712474619	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATCATAACATTTCCT	5200	False	NA	NA	False	NA	NA	NA	35763158	35769219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_35764542_35765601_35765777_35766363_35766432_35767079
tx.2691	chr11	-	2660	4	ISM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	3461	-409	3178	409	3prime_fragment	FALSE	canonical	3	629	junction_3	74.8079021375565	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTTGTCACTTATTTC	NA	False	NA	NA	False	NA	NA	NA	51888128	51877084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200
tx.26910	chr5	-	2468	9	FSM	ENSMUSG00000029096.16	ENSMUST00000087629.10	2750	9	265	17	-45	-17	multi-exon	FALSE	canonical	1	1	junction_1	0.484122918275927	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGTCAACCAGAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	35836861	35809383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_35810467_35811414_35811511_35812887_35812937_35821306_35821422_35822757_35822791_35823393_35823589_35825526_35825750_35828375_35828476_35836287
tx.26911	chr5	+	3578	19	NIC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	19	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	27.4896725838165	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACTTGCGAAAGGACAAA	1532	False	NA	NA	False	NA	NA	NA	35915242	36042313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
tx.26912	chr5	+	2299	9	NNC	ENSMUSG00000050248.12	novel	2796	12	NA	NA	-11	-14806	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	11.0227038425243	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGACACTGCTGCAGT	8831	False	NA	NA	False	NA	NA	NA	37495831	37530302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37529263
tx.26913	chr5	-	3148	12	FSM	ENSMUSG00000005107.14	ENSMUST00000067886.12	3602	12	95	359	-29	7	multi-exon	TRUE	canonical	1	1	junction_11	4.00619355209649	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCCTTGGCTGGGTAC	NA	False	NA	NA	False	NA	NA	NA	38637554	38506974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_38508681_38520185_38520314_38537260_38537337_38539385_38539488_38549056_38549168_38556044_38556233_38574517_38574651_38593882_38594029_38597992_38598118_38610444_38610606_38634737_38634837_38637381
tx.26914	chr5	-	2638	8	ISM	ENSMUSG00000005107.14	ENSMUST00000067886.12	3602	12	43571	361	4094	5	3prime_fragment	FALSE	canonical	1	2	junction_4	4.1206300291017	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGCCTTGGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	38594078	38506976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_38508681_38520185_38520314_38537260_38537337_38539385_38539488_38549056_38549168_38556044_38556233_38574517_38574651_38593882
tx.26915	chr5	+	1827	2	Antisense	novelGene_ENSMUSG00000005107.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGCTTTGAACTCT	NA	False	NA	NA	False	NA	NA	NA	38645344	38648754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_+_38645638_38647220
tx.26916	chr5	-	2990	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	233.56139122164	768	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	NA	False	NA	NA	NA	38719055	38684155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692679_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
tx.26917	chr5	+	7040	11	FSM	ENSMUSG00000039782.16	ENSMUST00000114065.9	7116	11	75	1	75	0	multi-exon	TRUE	canonical	2	6	junction_3	4.68614980554399	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTGTAATCTTATTC	NA	False	NA	NA	False	NA	NA	NA	43390587	43447066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_43392432_43394649_43394932_43395669_43395760_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
tx.26918	chr5	-	8169	9	NIC	ENSMUSG00000039753.17	novel	2306	10	NA	NA	-3	-8	intron_retention	FALSE	canonical	2	6	junction_3	188.992352689203	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTTACCAAGCAATATC	8838	False	NA	NA	False	NA	NA	NA	43939482	43901973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_43908353_43915563_43916287_43917084_43917168_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
tx.26919	chr5	-	2237	10	NNC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	40	-4345	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	20.6559111797729	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCTCAGAGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	52723764	52695203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52719754_52719814_52720780_52720912_52721307_52721380_52723259
tx.2692	chr11	-	4141	5	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	4	-60	intron_retention	FALSE	canonical	3	629	junction_3	65.1704495918204	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCAGTCTCTCTAGTA	NA	False	NA	NA	False	NA	NA	NA	51891302	51876383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51888726_51891119
tx.26920	chr5	-	5025	10	NIC	ENSMUSG00000029173.13	novel	5185	11	NA	NA	28	-29	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	33.6419050854404	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAAATCTGGAAGTGCA	NA	False	NA	NA	False	NA	NA	NA	52827022	52797457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52821509_52821664_52822577_52822737_52823329_52823449_52826307_52826396_52826916
tx.26922	chr5	+	1545	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	30957	-45	30863	45	3prime_fragment	FALSE	canonical	3	148	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATTTGAGGCAGGTCT	NA	False	NA	NA	False	NA	NA	NA	65536613	65541395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_65537415_65540651
tx.26925	chr5	-	7036	35	NIC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	-1	0	intron_retention	FALSE	canonical	1	4	junction_29	12.9002025144373	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATACTTTGCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	68004775	67776503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
tx.26926	chr5	+	4902	14	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	11	-8	intron_retention	FALSE	canonical	2	6	junction_8	53.2788799924927	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGTCTTGATACTG	NA	False	NA	NA	False	NA	NA	NA	69714314	69730439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
tx.26927	chr5	+	3649	15	FSM	ENSMUSG00000029208.17	ENSMUST00000031113.13	1769	15	3	-1883	3	510	multi-exon	FALSE	canonical	3	7	junction_8	41.9435967237247	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGGTTGCCAGTATGC	NA	False	NA	NA	False	NA	NA	NA	69714333	69730957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
tx.26928	chr5	-	11532	64	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	-19	131	combination_of_known_junctions	FALSE	canonical	3	10	junction_22	12.0369800568452	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGTGGTATTTTAAG	NA	False	NA	NA	False	NA	NA	NA	73413981	73177533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228650_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
tx.26929	chr5	+	7224	5	ISM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	47717	-2643	-1539	-2	3prime_fragment	FALSE	canonical	3	628	junction_2	89.031946513597	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	74743858	74759449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.2693	chr11	-	1738	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	-42	-1111	-42	-59	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTCTCTCTAGTAG	NA	False	NA	NA	False	NA	NA	NA	51891631	51876382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
tx.26930	chr5	+	6829	23	FSM	ENSMUSG00000029231.16	ENSMUST00000168162.5	6834	23	12	-7	12	7	multi-exon	FALSE	canonical	0	0	junction_13	1.08330684434663	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAAGGTCTACCACTTC	NA	False	NA	NA	False	NA	NA	NA	75316571	75358869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_75317011_75322891_75322953_75324195_75324514_75327171_75327433_75328497_75328629_75331155_75331328_75331422_75331613_75334049_75334166_75335605_75335733_75337327_75337522_75338305_75338401_75338590_75338724_75340828_75340934_75341659_75341771_75342182_75342337_75343636_75343804_75346174_75346291_75346611_75346735_75348523_75348636_75349680_75349781_75349891_75349998_75353091_75353334_75355613
tx.26931	chr5	+	2545	2	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	22219	0	1979	0	3prime_fragment	FALSE	canonical	3	1259	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	76353945	76357092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_76355755_76356356
tx.26932	chr5	-	7814	23	NIC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	-7	332	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	11.9323160069308	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTAGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	76452402	76359691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
tx.26933	chr5	+	7136	11	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	2	106	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.28785644455472	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGTGTGATTTTAACA	NA	False	NA	NA	False	NA	NA	NA	76805533	77021283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76988634_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77018363
tx.26936	chr5	+	6685	5	NIC	ENSMUSG00000006262.16	novel	8967	6	NA	NA	-7	-2164	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	14.6969384566991	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCCTTCGCATTAGT	NA	False	NA	NA	False	NA	NA	NA	88868722	88909915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_88868981_88891162_88891330_88897383_88897518_88901018_88901183_88903953
tx.26937	chr5	-	4515	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATCAGAGTAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	89356956	89351761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_-_89351965_89352644
tx.26938	chr5	-	4469	14	ISM	ENSMUSG00000055204.16	ENSMUST00000197021.2	8067	34	75625	-1	-795	1	3prime_fragment	FALSE	canonical	3	118	junction_8	23.138891158041	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTTCTACTTGTATAT	NA	False	NA	NA	False	NA	NA	NA	90411977	90376598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849
tx.26939	chr5	+	3039	5	NNC	ENSMUSG00000102644.6	novel	650	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	9.28372231381357	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGGGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	92110756	92119925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_92110835_92111541_92111645_92112954_92113164_92114310_92114434_92117399
tx.2694	chr19	-	170	1	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	3	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAAAAGATT	2684	False	NA	NA	False	NA	NA	NA	47862271	47862101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr19_-_47862100_47862300
tx.26940	chr5	-	4231	14	FSM	ENSMUSG00000029403.15	ENSMUST00000113140.5	2559	14	-14	-1658	10	-91	multi-exon	FALSE	canonical	1	1	junction_2	2.00590843237005	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCACGATATATGGCTTT	NA	False	NA	NA	False	NA	NA	NA	92190545	92154023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_92155994_92156823_92156913_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190045
tx.26941	chr5	-	3580	7	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	50868	3	50868	-3	3prime_fragment	TRUE	canonical	3	100	junction_5	15.7762127549323	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCACTGTGAACTGT	NA	False	NA	NA	False	NA	NA	NA	92602628	92589175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590
tx.26942	chr5	-	178	1	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAGTGTGAATATTAAAT	NA	False	NA	NA	False	NA	NA	NA	92905923	92905745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_92905700_92905900
tx.26943	chr5	-	6133	12	NIC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	47	-2471	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	11.8265704494178	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGTGTTAAAAATTTGT	NA	False	NA	NA	False	NA	NA	NA	96309802	96220662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309708
tx.26944	chr5	-	5133	11	ISM	ENSMUSG00000034724.19	ENSMUST00000113005.9	3170	12	27622	-2026	-5105	1865	3prime_fragment	FALSE	canonical	3	19	junction_9	8.08455317256309	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGAATATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	96281992	96221569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869
tx.26945	chr5	-	4638	12	NIC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	25	886	combination_of_known_junctions	TRUE	canonical	2	2	junction_11	11.8265704494178	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAAGTTTATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	96309705	96222548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309220
tx.26946	chr5	-	2970	14	FSM	ENSMUSG00000089809.10	ENSMUST00000168092.8	2987	14	17	0	17	0	multi-exon	FALSE	canonical	1	1	junction_13	1.81707874015657	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGAGTTGTGGCGTCTT	NA	False	NA	NA	False	NA	NA	NA	99400769	99365284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_99366658_99369219_99369293_99370176_99370301_99370798_99370895_99375846_99375943_99377179_99377260_99379949_99380053_99380160_99380257_99381773_99381849_99382334_99382548_99388681_99388820_99389267_99389391_99390922_99391106_99400572
tx.26947	chr5	-	4757	10	ISM	ENSMUSG00000043940.16	ENSMUST00000174598.8	10581	65	129028	-3202	-1017	0	3prime_fragment	FALSE	canonical	3	14	junction_1	5.61963049617857	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAAGTTGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	102000396	101980821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373
tx.26948	chr5	-	5017	11	ISM	ENSMUSG00000043940.16	ENSMUST00000174598.8	10581	65	126031	-3198	-4014	-4	3prime_fragment	FALSE	canonical	3	14	junction_1	5.34883164812653	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTTTAAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	102003393	101980825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254
tx.26949	chr5	-	7387	30	ISM	ENSMUSG00000043940.16	ENSMUST00000212024.2	10539	65	93403	-3198	-36642	-4	3prime_fragment	TRUE	canonical	2	5	junction_29	7.74811549332988	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTTTAAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	102036021	101980825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102025871_102025926_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952
tx.2695	chr11	+	2578	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	135	4389	135	3697	multi-exon	TRUE	canonical	3	1809	junction_6	129.264586539908	2448	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGTGTTGAATTTGGAA	NA	False	NA	NA	False	NA	NA	NA	51989642	52014216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
tx.26950	chr5	+	4242	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-40	672	intron_retention	FALSE	canonical	0	0	junction_1	72	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGTGCTTGTCAAGTAC	NA	False	NA	NA	False	NA	NA	NA	101987980	101994948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_101988701_101989616_101989940_101991749
tx.26951	chr5	-	4828	15	ISM	ENSMUSG00000043940.16	ENSMUST00000053177.14	14274	67	-80	101260	-80	865	5prime_fragment	FALSE	canonical	3	36	junction_1	9.26150690784613	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTCCTAAAGCGTT	NA	False	NA	NA	False	NA	NA	NA	102217867	102082081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
tx.26952	chr5	-	2218	11	NNC	ENSMUSG00000046709.19	novel	6761	13	NA	NA	40	760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGTAGAAAGAACATAT	NA	False	NA	NA	False	NA	NA	NA	103174821	103060234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_103061199_103073937_103074016_103076088_103076153_103111332_103111458_103114311_103114495_103135068_103135141_103137485_103137652_103138369_103138509_103139734_103139794_103144449_103144580_103174583
tx.26953	chr5	+	7421	19	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	19	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	71.7179833500808	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	False	NA	NA	False	NA	NA	NA	103840258	104003182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_103840470_103863215_103863272_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
tx.26954	chr5	-	3172	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-1	11	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	28.2991078688506	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	104059126	104009934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034154_104058981
tx.26956	chr5	+	6851	6	NNC	ENSMUSG00000070639.6	novel	6726	5	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.9138143006306	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAGAATCTGATTGGCC	3373	False	NA	NA	False	NA	NA	NA	105563645	105637931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_105563779_105602568_105602708_105616662_105616718_105624051_105624151_105627632_105629795_105633668
tx.26957	chr5	+	2446	9	ISM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	9747	11	-4629	-11	3prime_fragment	FALSE	canonical	3	27	junction_1	7.67707626639204	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAAATAATTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	106034180	106063673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
tx.26958	chr5	+	3777	8	ISM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	10441	-9	-3935	9	3prime_fragment	FALSE	canonical	3	32	junction_7	6.8332918532008	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCATGTCTGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	106034874	106063693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
tx.26959	chr5	+	4741	8	ISM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	57881	618	-1500	-5	internal_fragment	FALSE	canonical	2	10	junction_4	1.97948663722157	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATTTTGTAAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	107643743	107658069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
tx.2696	chr11	-	196	2	Antisense	novelGene_ENSMUSG00000020402.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGGCCTGTATTAAAAAA	9030	False	NA	NA	False	NA	NA	NA	52274318	52107485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_52107631_52274267
tx.26960	chr5	+	2123	7	ISM	ENSMUSG00000033773.15	ENSMUST00000112654.8	2914	12	-10	23228	-10	12706	5prime_fragment	FALSE	canonical	3	138	junction_1	9.8952850725316	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTGTGAGAGTATAAAAT	NA	False	NA	NA	False	NA	NA	NA	107745572	107767560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006
tx.26961	chr5	+	2508	12	FSM	ENSMUSG00000033773.15	ENSMUST00000112655.8	2686	12	-65	243	-8	-243	multi-exon	TRUE	canonical	1	3	junction_11	43.9966189534928	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGCTTCCAAAACTG	NA	False	NA	NA	False	NA	NA	NA	107745574	107790545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107789819
tx.26962	chr5	+	2345	10	NIC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	41.1801222574169	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTTCTTTTGAACAT	NA	False	NA	NA	False	NA	NA	NA	108777699	108795123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790904_108791070_108792033_108792113_108792422_108792559_108793704
tx.26963	chr5	+	2496	10	NIC	ENSMUSG00000013495.16	novel	1811	11	NA	NA	20	-12	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	49.4772675074119	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACAAAGAATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	108777717	108795117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
tx.26964	chr5	+	2856	5	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	7.58287544405155	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	109614921	109627434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_109615053_109618707_109618865_109624129_109624257_109624444_109624506_109625054
tx.26965	chr5	-	1532	8	FSM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	-127	0	-70	0	multi-exon	FALSE	canonical	1	3	junction_7	232.416937104552	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109706929	109702574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705616_109706670
tx.26967	chr5	-	187	1	Intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	2	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTTACCTTAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	110365322	110365135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_110365100_110365300
tx.26968	chr5	+	559	3	NNC	ENSMUSG00000104807.2	novel	613	3	NA	NA	-31162	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGTCAAGGTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	112792078	112828453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_112792262_112824588_112824815_112828303
tx.26969	chr5	-	7220	6	ISM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	88003	-1	-1713	1	3prime_fragment	FALSE	canonical	3	69	junction_1	8.11418511004032	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGAGGCTGACATCT	6205	False	NA	NA	False	NA	NA	NA	113075377	113058346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261
tx.2697	chr11	+	1227	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	29	184	1	-184	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	2194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	440	False	NA	NA	False	NA	NA	NA	52122864	52137501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
tx.26970	chr5	-	8587	11	ISM	ENSMUSG00000051339.11	ENSMUST00000211733.2	10238	13	29039	1476	-28846	-1476	3prime_fragment	FALSE	canonical	3	16	junction_2	4.88773976393998	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGCTCCTTGGACATG	4	True	NA	NA	False	NA	NA	NA	113340063	113235664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469
tx.26971	chr5	-	769	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCTATGTGCAATCTG	1987	False	NA	NA	False	NA	NA	NA	113722792	113711248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_-_113711932_113722706
tx.26973	chr5	-	3022	2	ISM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	-14	-1	-14	1	intron_retention	FALSE	canonical	3	557	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTATTTGGGGGGGGG	7964	False	NA	NA	False	NA	NA	NA	114266293	114261994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_114262316_114263592
tx.26977	chr5	-	3517	10	FSM	ENSMUSG00000029556.13	ENSMUST00000031535.12	3191	10	-217	-109	-190	109	multi-exon	FALSE	canonical	2	7	junction_9	4.10960933531265	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTGTCCTTGTTAC	9968	False	NA	NA	False	NA	NA	NA	115109343	115086929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
tx.26978	chr5	-	400	2	Intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGGATTTATTTATT	6185	False	NA	NA	False	NA	NA	NA	115458428	115412695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_115412898_115458230
tx.26979	chr5	+	3018	11	NIC	ENSMUSG00000029516.20	novel	2335	10	NA	NA	-13	1286	intron_retention	FALSE	canonical	3	13	junction_1	12.3971770980332	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAAGCTCTGTCATTAT	8468	False	NA	NA	False	NA	NA	NA	115983323	116065054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
tx.2698	chr11	-	3066	11	FSM	ENSMUSG00000000782.17	ENSMUST00000109071.3	2059	11	-54	-953	-54	88	multi-exon	FALSE	canonical	3	39	junction_6	94.0672631684371	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	52174212	52143109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
tx.26980	chr5	-	5750	2	FSM	ENSMUSG00000063919.12	ENSMUST00000139425.2	2798	2	205	-3157	205	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAGAGAGAGAATCCT	7163	False	NA	NA	False	NA	NA	NA	116584698	116577333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_116582934_116584548
tx.26981	chr5	+	2944	18	ISM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	17	10978	17	-9628	5prime_fragment	FALSE	canonical	0	0	junction_10	2.59491117648386	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAACTGAAAAAAT	1403	False	NA	NA	False	NA	NA	NA	117258210	117402304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629
tx.26982	chr5	-	1827	4	NNC	ENSMUSG00000086847.2	novel	1345	3	NA	NA	0	436	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	1.4142135623731	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATCAAAGACTAAACACAA	2703	False	NA	NA	False	NA	NA	NA	119829283	119822723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_119824120_119826288_119826463_119828572_119828619_119829072
tx.26984	chr5	-	3421	9	ISM	ENSMUSG00000032690.17	ENSMUST00000053909.13	3869	11	3804	0	3804	0	3prime_fragment	FALSE	canonical	0	0	junction_2	0.82915619758885	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGACTGTCCTGGAACT	9045	False	NA	NA	False	NA	NA	NA	120884114	120868397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_120870024_120871478_120871633_120873044_120873284_120874061_120874250_120876359_120876643_120876734_120876909_120879213_120879359_120881109_120881349_120883741
tx.26985	chr5	-	2534	12	NIC	ENSMUSG00000042726.15	novel	2503	12	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	13.1274741863161	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCTTGTGATTCTTTC	3749	False	NA	NA	False	NA	NA	NA	121523515	121509792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523371
tx.26986	chr5	-	3719	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-54	1	intron_retention	FALSE	canonical	0	0	junction_1	16.4723660405907	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTTGATCATGATG	NA	False	NA	NA	False	NA	NA	NA	121757055	121734836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752350_121756943
tx.26987	chr5	+	3780	12	NIC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	41.136740329767	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTACGTTTGAGTCT	914	False	NA	NA	False	NA	NA	NA	121798632	121825308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_121798912_121800062_121800225_121801304_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
tx.26988	chr5	+	4299	2	NIC	ENSMUSG00000044134.10	novel	2368	4	NA	NA	27	2	intron_retention	FALSE	canonical	3	47	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTGGGTGTATTATT	5461	False	NA	NA	False	NA	NA	NA	121987094	121992664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_121989343_121990613
tx.26989	chr5	-	5317	23	NIC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-374	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	3.3016399631518	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCAGCCGATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	122188539	121998280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122181832_122181908_122188078
tx.2699	chr11	-	2988	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-49	85	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	70.8071629214704	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	52174207	52143112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_52144813_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
tx.26990	chr5	-	4826	11	NIC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	18	-167	intron_retention	FALSE	canonical	3	7	junction_10	5.24976189936268	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAATAGTGATTTTTTT	9953	False	NA	NA	False	NA	NA	NA	122492265	122461452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606
tx.26991	chr5	+	2968	9	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	-21	1631	16	0	intron_retention	FALSE	canonical	3	226	junction_7	31.9567578925022	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCTTTTACCTGTCATC	NA	False	NA	NA	False	NA	NA	NA	122560522	122579866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148
tx.26992	chr5	+	4599	7	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	-20	1641	17	-10	intron_retention	FALSE	canonical	3	232	junction_6	26.8416136292553	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTGAATACAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	122560523	122579856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191
tx.26993	chr5	-	4008	2	ISM	ENSMUSG00000090086.8	ENSMUST00000159072.2	957	3	186	0	186	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAGTTGCTGAACATT	NA	False	NA	NA	False	NA	NA	NA	123275986	123271785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_123272494_123272686
tx.26994	chr5	-	8153	26	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-16	-4	intron_retention	FALSE	canonical	0	0	junction_17	15.1511847721556	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGGTTGGTTGGTTT	9886	False	NA	NA	False	NA	NA	NA	123822404	123715861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
tx.26995	chr5	+	2303	5	NIC	ENSMUSG00000023707.14	novel	818	6	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	76	junction_4	12.0701077045733	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTTTGCTATTATT	NA	False	NA	NA	False	NA	NA	NA	124250380	124253543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124252709_124252777
tx.26996	chr5	+	1639	6	ISM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	22	4	-2	3	intron_retention	FALSE	canonical	3	59	junction_5	18.5105375394665	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCTGTTTGCTATTAT	NA	False	NA	NA	False	NA	NA	NA	124250381	124253542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450
tx.26997	chr5	-	2492	4	NIC	ENSMUSG00000037979.14	novel	2473	4	NA	NA	247	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	78.9317567410115	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTGGTGGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	124939241	124911481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_124913356_124916006_124916049_124916724_124916872_124938812
tx.26998	chr5	-	194	1	Intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	2	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGACAGTTAGGCCAG	NA	False	NA	NA	False	NA	NA	NA	125357952	125357758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_125357800_125358000
tx.26999	chr5	+	1979	3	Intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	7	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAGAATGCTGTCATT	9015	False	NA	NA	False	NA	NA	NA	125451132	125456621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_125452329_125454603_125454786_125456020
tx.27	chr1	+	3655	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	25	0	-24	0	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	9839	False	NA	NA	False	NA	NA	NA	9918521	9971068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
tx.270	chr1	-	3508	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	-284	4	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_1	0	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGTCCTCATTTAATT	NA	False	NA	NA	False	NA	NA	NA	52992793	52961478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_52964894_52992700
tx.2700	chr11	-	3135	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-56	82	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	83.2218979447156	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	NA	False	NA	NA	False	NA	NA	NA	52174214	52143115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
tx.27000	chr5	-	6323	7	NIC	ENSMUSG00000029416.18	novel	2673	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_5	30.6195289897731	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	127694482	127672727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127685835_127686126_127693878
tx.27001	chr5	+	749	7	NNC	ENSMUSG00000049971.18	novel	1713	11	NA	NA	-15	-22135	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	12.7986544431653	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTCTTGGTCATGG	8686	False	NA	NA	False	NA	NA	NA	127709310	127744800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127744557
tx.27002	chr5	+	3327	2	ISM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	59672	1577	34901	-1577	3prime_fragment	FALSE	canonical	3	22	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGTGACAAGAGGTCA	NA	False	NA	NA	False	NA	NA	NA	127768997	127784861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_127771390_127783926
tx.27003	chr5	+	5863	18	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-11	0	intron_retention	FALSE	canonical	3	39	junction_14	23.0561222907605	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	129578273	129648448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
tx.27004	chr5	+	5357	16	NIC	ENSMUSG00000029439.15	novel	5127	18	NA	NA	-312	-4	intron_retention	FALSE	canonical	3	26	junction_9	24.9422443969174	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCAGCCTGGGGCTCTC	NA	False	NA	NA	False	NA	NA	NA	129579145	129648441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_+_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
tx.27005	chr5	+	5222	3	ISM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	593	7	538	-7	3prime_fragment	FALSE	canonical	3	34	junction_2	2263.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAACCCTGTCTCAAAA	6598	False	NA	NA	False	NA	NA	NA	129925156	129932457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_129928274_129929185_129929337_129930503
tx.27006	chr5	-	6335	15	NIC	ENSMUSG00000029673.20	novel	3572	17	NA	NA	-86	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	16.5278058842346	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCAGATGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	131567612	131466172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131499251_131499297_131501075_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
tx.27007	chr5	+	2170	10	NNC	ENSMUSG00000007207.11	novel	2162	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	4.42495727816442	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCTGTTTGGAACA	NA	False	NA	NA	False	NA	NA	NA	135052362	135079954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_135052465_135065979_135066058_135066329_135066430_135070090_135070166_135070784_135070859_135070962_135071072_135071446_135071521_135074450_135074589_135077564_135077711_135078680
tx.27008	chr5	+	2409	3	ISM	ENSMUSG00000007207.11	ENSMUST00000156626.8	2114	7	1528	-3	1322	2	intron_retention	FALSE	canonical	3	18	junction_1	7.5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTCTGTTTGGAACATC	7204	False	NA	NA	False	NA	NA	NA	135071441	135079956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_135071521_135074450_135074589_135077764
tx.27009	chr5	+	3468	17	NNC	ENSMUSG00000005373.14	novel	3622	17	NA	NA	-4	-182	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	5.1478150704935	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCCCTTTGAGTACTT	3403	False	NA	NA	False	NA	NA	NA	135135740	135167054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162108_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
tx.2701	chr11	-	2969	10	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-53	85	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	63.2314970740233	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	52174211	52143112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
tx.27010	chr5	+	2719	3	NNC	ENSMUSG00000053388.11	novel	1456	6	NA	NA	-1385	-6645	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	4	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAACATTTACCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	135380763	135389863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_135380916_135382136_135382549_135387708
tx.27011	chr5	-	1897	6	FSM	ENSMUSG00000005057.14	ENSMUST00000196447.2	1783	6	-110	-4	-44	4	multi-exon	FALSE	canonical	2	3	junction_1	2.0591260281974	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAACTTTTGCTGGGT	2458	False	NA	NA	False	NA	NA	NA	136273801	136252618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_-_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
tx.27012	chr5	+	2282	5	Antisense	novelGene_ENSMUSG00000004415.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	4.03112887414927	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTCCTTTCCAAAGCT	NA	False	NA	NA	False	NA	NA	NA	136743136	136779448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_+_136743490_136773793_136773974_136774222_136774384_136777293_136777375_136777941
tx.27013	chr5	+	1866	4	Antisense	novelGene_ENSMUSG00000004415.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0.816496580927726	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTTATCTCCTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	136766569	136779444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr5_+_136766691_136774222_136774384_136777293_136777375_136777941
tx.27015	chr5	-	1112	2	ISM	ENSMUSG00000079173.12	ENSMUST00000130056.2	2114	8	12767	-6	12767	6	3prime_fragment	FALSE	canonical	1	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGAAGGTTATAGCCTA	NA	False	NA	NA	False	NA	NA	NA	137436118	137434124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_137435100_137435981
tx.27016	chr5	-	2741	11	NIC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	44.2361842839095	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1787	False	NA	NA	False	NA	NA	NA	137682965	137648724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
tx.27017	chr5	+	3883	5	ISM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	247	274	247	-274	3prime_fragment	FALSE	canonical	3	120	junction_4	28.3581998723473	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGAGTCCCATTTCAAA	5845	False	NA	NA	False	NA	NA	NA	138185993	138191906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
tx.27018	chr5	+	933	2	FSM	ENSMUSG00000085227.2	ENSMUST00000141454.2	624	2	17	-326	2	-3	multi-exon	FALSE	canonical	3	10	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGAGGACACAAGTTTAT	6203	False	NA	NA	False	NA	NA	NA	138262332	138264920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_138262364_138264018
tx.27019	chr5	-	3485	9	NIC	ENSMUSG00000029510.16	novel	2586	10	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	16	junction_5	3.63145976158349	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGGCTCTCTGTGTGT	1704	False	NA	NA	False	NA	NA	NA	138278284	138271919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
tx.2702	chr11	-	3059	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-47	85	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	63.363712012476	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	52174205	52143112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
tx.27020	chr5	-	4237	23	NIC	ENSMUSG00000036555.15	novel	2494	23	NA	NA	-10	-18	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	9.06860901249401	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGGTGAAGCCTGAAGC	4479	False	NA	NA	False	NA	NA	NA	140688065	140649277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr5_-_140651249_140651762_140651964_140654776_140654876_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140679169_140679299_140682762_140682809_140685439_140685488_140687936
tx.27021	chr5	+	4126	22	FSM	ENSMUSG00000010825.18	ENSMUST00000110733.9	3825	22	25	-326	25	-4	multi-exon	TRUE	canonical	0	0	junction_4	1.4630753805464	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTGGCTTGCTGCGG	NA	False	NA	NA	False	NA	NA	NA	143343117	143377549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_143343702_143348306_143348462_143358748_143358998_143359185_143359272_143360154_143360225_143361006_143361102_143361304_143361489_143363243_143363399_143365006_143365148_143365854_143365953_143366140_143366259_143367337_143367694_143368268_143368686_143371761_143371850_143372475_143372554_143373072_143373270_143373576_143373733_143373863_143373951_143374403_143374534_143374621_143374741_143376795_143376961_143377151
tx.27022	chr5	+	3499	2	FSM	ENSMUSG00000052271.8	ENSMUST00000060747.8	3494	2	-4	-1	-4	1	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGGTATAAATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	144127099	144131260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_144127177_144127838
tx.27023	chr5	+	137	2	Intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGTGTATTCATATATG	NA	False	NA	NA	False	NA	NA	NA	144318882	144350771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_+_144318986_144350737
tx.27024	chr5	-	3369	7	ISM	ENSMUSG00000043388.9	ENSMUST00000061446.8	2805	8	5375	1	5375	-1	3prime_fragment	TRUE	canonical	2	6	junction_6	4.2687494916219	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGTGTGGCAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	144693084	144672725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097_144689258_144692020
tx.27025	chr5	+	2649	5	NNC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	33	960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.7946947868637	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGTAACTTTCCTGTAA	2806	False	NA	NA	False	NA	NA	NA	145217342	145229048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_145217438_145220161_145220591_145224117_145224210_145225103_145225228_145227139
tx.27026	chr5	+	5881	12	ISM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	24776	0	-1729	0	3prime_fragment	FALSE	canonical	3	65	junction_2	20.5707808503564	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	NA	NA	NA	146192873	146239684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
tx.27027	chr5	+	3062	8	ISM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	53812	0	-1076	0	3prime_fragment	FALSE	canonical	3	75	junction_1	21.3235521794803	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	NA	NA	NA	146221909	146239684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
tx.27028	chr5	+	4959	6	FSM	ENSMUSG00000029635.16	ENSMUST00000159615.2	1976	6	-2932	-51	-2932	-4	multi-exon	FALSE	canonical	3	84	junction_4	17.7831380807775	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTATGGTGTCAACTA	NA	False	NA	NA	False	NA	NA	NA	146228787	146239680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr5_+_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
tx.27029	chr5	-	3286	2	ISM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	55070	626	-2481	-626	3prime_fragment	FALSE	canonical	3	45	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTCTGGTGAATATTTG	5447	False	NA	NA	False	NA	NA	NA	146958326	146954090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_-_146955867_146956816
tx.2703	chr11	-	3038	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-49	85	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_1	46.9302674187991	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	52174207	52143112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
tx.27030	chr5	+	549	2	NNC	ENSMUSG00000086494.2	novel	550	2	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTACCCTTTGACCCA	NA	False	NA	NA	False	NA	NA	NA	148678618	148679953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr5_+_148678795_148679580
tx.27031	chr5	-	465	2	Intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGACTCTCTGCATAAA	NA	False	NA	NA	False	NA	NA	NA	149572453	149571348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr5_-_149571694_149572333
tx.27032	chr5	+	4898	3	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	76665	50411	2582	-10411	internal_fragment	FALSE	canonical	3	163	junction_2	2	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTGCTTCTGAC	7	True	NA	NA	False	NA	NA	NA	150673868	150682919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr5_+_150677935_150679846_150679896_150682136
tx.27033	chr6	+	3883	18	NNC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-31	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	14.1316107413603	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCAAGCCATGTGTGGT	-10	True	NA	NA	False	NA	NA	NA	4600917	4643347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614639_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
tx.27034	chr6	+	10169	21	NIC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	3.57036412708844	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGAGTCCATGTTTCTT	-2	True	NA	NA	False	NA	NA	NA	4902961	5165661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_4903032_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5157003_5157028_5158088_5158272_5159551
tx.27035	chr6	+	9600	20	NIC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	307	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	3.59670517121471	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCGGAGTCCATGTTTC	510	False	NA	NA	False	NA	NA	NA	4905722	5165659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5157003_5157028_5158088_5158272_5159551
tx.27036	chr6	-	1887	9	FSM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	52	-102	-1	102	multi-exon	FALSE	canonical	3	12	junction_4	13.4350288425444	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAAAACCA	18	True	NA	NA	False	NA	NA	NA	5256234	5220749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5246277_5246334_5254515_5254587_5256152
tx.27037	chr6	-	1977	10	NIC	ENSMUSG00000032667.18	novel	2409	9	NA	NA	53	-473	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	3.91893157523298	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTGTTTATTCT	0	True	NA	NA	False	NA	NA	NA	5298402	5264619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277871_5277928_5278718_5278813_5289012_5289084_5298211
tx.27038	chr6	+	6693	21	NIC	ENSMUSG00000009376.16	novel	6809	22	NA	NA	-28	-3	combination_of_known_junctions	TRUE	canonical	2	2	junction_14	4.35057467468379	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGGCTGTAGCTAGTC	-9	True	NA	NA	False	NA	NA	NA	17463770	17573976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_17464248_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552_17563719_17571370_17571508_17571611
tx.27039	chr6	+	1704	4	Intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	3.09120616516523	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTTCTCTACCTGACT	3759	False	NA	NA	False	NA	NA	NA	22443894	22447317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_+_22444066_22444730_22445154_22445272_22445825_22446759
tx.2704	chr11	-	2822	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-55	82	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_1	76.6025496787408	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	NA	False	NA	NA	False	NA	NA	NA	52174213	52143115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_52144644_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
tx.27040	chr6	-	4872	27	NNC	ENSMUSG00000017978.19	novel	4571	28	NA	NA	-107	0	intron_retention	FALSE	non_canonical	0	0	junction_3	1.30599437279613	1	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCTCTATGTTCATTAC	9	True	NA	NA	False	NA	NA	NA	23839527	23262837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_23263716_23269244_23269350_23287662_23287771_23302292_23302326_23302429_23302514_23314131_23314219_23321704_23321853_23323278_23323435_23329018_23329161_23344205_23344363_23355822_23355927_23382879_23383004_23385465_23385530_23390383_23390486_23410740_23410929_23412946_23413084_23427162_23427364_23429108_23429218_23443970_23444038_23496756_23496897_23528050_23528163_23583340_23583463_23587375_23587613_23599428_23599510_23626491_23626825_23688845_23688960_23838788
tx.27041	chr6	-	3861	5	NNC	ENSMUSG00000079654.4	novel	3411	5	NA	NA	622	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	5.53962995154008	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATGTTCTGACCTTCT	692	False	NA	NA	False	NA	NA	NA	29178961	29169231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29178382
tx.27042	chr6	+	3870	18	FSM	ENSMUSG00000029769.18	ENSMUST00000096084.13	3894	18	23	1	23	-1	multi-exon	FALSE	canonical	0	0	junction_15	2.99249349222986	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACATTGTGTGACTTTTT	-21	True	NA	NA	False	NA	NA	NA	29396596	29426950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_29396742_29397477_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29417930_29418153_29419100_29419383_29419985_29420265_29426623
tx.27043	chr6	+	518	2	Intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGTGTATAATGTGTATT	NA	False	NA	NA	False	NA	NA	NA	29639057	29642169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_+_29639206_29641799
tx.27044	chr6	+	1099	7	ISM	ENSMUSG00000071553.11	ENSMUST00000096066.5	1388	11	5348	3	288	-3	3prime_fragment	FALSE	canonical	2	2	junction_5	2.98142396999972	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGCTTCTGGTCATTT	1937	False	NA	NA	False	NA	NA	NA	30546928	30564472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_30547206_30549240_30549340_30550743_30550855_30551964_30552056_30554162_30554363_30557670_30557756_30564236
tx.27045	chr6	-	11823	10	NIC	ENSMUSG00000029790.17	novel	3522	12	NA	NA	-10	3114	intron_retention	TRUE	canonical	3	75	junction_7	8.09358837843303	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCTGATGTGATTGCTG	NA	False	NA	NA	False	NA	NA	NA	30693758	30650341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
tx.27046	chr6	-	7656	2	FSM	ENSMUSG00000046806.14	ENSMUST00000140458.2	709	2	-842	-6105	187	2530	multi-exon	FALSE	canonical	3	23	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAAAACAAACAAC	7835	False	NA	NA	False	NA	NA	NA	34854757	34846175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_34852548_34853473
tx.27047	chr6	-	7639	15	NIC	ENSMUSG00000063455.17	novel	10916	20	NA	NA	-12805	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	6.03095755080334	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGAAGCTGTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	38158356	38100117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_38105511_38107716_38107863_38113768_38113927_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248
tx.27048	chr6	-	6235	19	ISM	ENSMUSG00000063455.17	ENSMUST00000117556.8	10916	20	58623	2836	-910	4	3prime_fragment	FALSE	canonical	2	8	junction_10	4.85213456908846	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTAATGTCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	38172267	38102944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_38105511_38107716_38107863_38113768_38113930_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318
tx.27049	chr6	-	8320	20	NIC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-199	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	11.9845237228797	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAGTTAAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	38231143	38102954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_38105511_38107716_38107863_38113768_38113927_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
tx.2705	chr11	+	1823	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	198	1	-77	-1	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	3221	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTTGTTGTTTTTGTT	5329	False	NA	NA	False	NA	NA	NA	52251884	52280223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
tx.27050	chr6	-	6819	20	NIC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-308	-1565	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	11.6891881289324	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATGTTGGTGGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	38231252	38104519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_38105463_38107716_38107863_38113768_38113930_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
tx.27051	chr6	-	7241	3	ISM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	4	67	4	-67	intron_retention	FALSE	canonical	3	137	junction_1	0.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGGCATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	38276190	38264397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_38270073_38271992_38272255_38274886
tx.27052	chr6	-	4515	5	NNC	ENSMUSG00000071537.7	novel	3413	6	NA	NA	3	6847	intron_retention	FALSE	canonical	0	0	junction_1	7.88590514779375	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGTCTCTCGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	38614165	38595780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_38599089_38605019_38605124_38606698_38606845_38607215_38607318_38613310
tx.27053	chr6	-	13638	12	ISM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	-335	7495	-93	-7490	5prime_fragment	FALSE	canonical	2	8	junction_1	5.64661823755256	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38853192	38682313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
tx.27055	chr6	-	9522	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-126	-5	intron_retention	FALSE	canonical	3	23	junction_14	7.11219609778396	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACCTTAAGATTATTTT	6585	False	NA	NA	False	NA	NA	NA	39702253	39580175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177_39665280_39702040
tx.27056	chr6	-	3016	4	NNC	ENSMUSG00000051499.8	novel	3191	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.94422221866655	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCGTTTGGGTTTGC	6060	False	NA	NA	False	NA	NA	NA	47807461	47796199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_47798636_47801974_47802131_47803895_47804023_47807164
tx.27057	chr6	+	5191	5	NIC	ENSMUSG00000062519.14	novel	2906	6	NA	NA	97	2050	intron_retention	FALSE	canonical	3	18	junction_2	3.89711431702997	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTTTTCAGCAAATAG	NA	False	NA	NA	False	NA	NA	NA	47812725	47846672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_47812855_47817185_47817582_47835862_47836467_47840037_47840152_47842724
tx.2706	chr11	-	2881	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	-20	1757	-20	1309	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	3430	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCAACTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	53191304	53152397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
tx.27060	chr6	-	150	2	Antisense	novelGene_ENSMUSG00000050786.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTTTAAAAAAATTGA	9105	False	NA	NA	False	NA	NA	NA	49329586	49268172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr6_-_49268295_49329558
tx.27061	chr6	+	1345	6	FSM	ENSMUSG00000047115.16	ENSMUST00000121903.2	1304	6	-41	0	-41	0	multi-exon	FALSE	canonical	3	8	junction_5	14.4360659460949	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGGGTCAGATTTTTC	NA	False	NA	NA	False	NA	NA	NA	49344715	49366214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49365750
tx.27062	chr6	-	2622	3	NNC	ENSMUSG00000079560.14	novel	2591	5	NA	NA	2907	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCCGTGTCAAAGGGGG	6897	False	NA	NA	False	NA	NA	NA	52157928	52146042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_52147723_52149100_52149750_52157635
tx.27063	chr6	+	2431	5	NNC	ENSMUSG00000108175.2	novel	2065	5	NA	NA	26227	-7357	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	6.80073525436772	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTTGGTTGATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	53821954	53837811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_53822096_53828082_53828119_53834180_53834359_53835502_53835591_53835823
tx.27064	chr6	-	5355	6	ISM	ENSMUSG00000037826.6	ENSMUST00000042766.6	5560	7	10235	-5	-9584	5	3prime_fragment	FALSE	canonical	3	10	junction_2	2.57681974534503	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCAGTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	57502176	57483481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721
tx.27065	chr6	+	5122	25	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	10.7211337242539	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	NA	False	NA	NA	NA	58808464	58897383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
tx.27066	chr6	+	1185	2	Intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACGTGGTGTTCCATC	NA	False	NA	NA	False	NA	NA	NA	59050502	59056536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_+_59050776_59055624
tx.27067	chr6	+	648	2	FSM	ENSMUSG00000087231.8	ENSMUST00000147548.3	698	2	51	-1	1	1	multi-exon	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGAGTGTTGACAGTG	NA	False	NA	NA	False	NA	NA	NA	67013639	67040746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_67013920_67040378
tx.27068	chr6	+	1549	8	NNC	ENSMUSG00000055912.9	novel	1546	8	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	41.9075756631087	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCAGTGTGTTCTGG	NA	False	NA	NA	False	NA	NA	NA	72332462	72336740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335460_72335561_72335740_72335988
tx.27069	chr6	+	3230	5	ISM	ENSMUSG00000053460.9	ENSMUST00000207012.2	2014	13	10699	-2405	1937	1935	3prime_fragment	FALSE	canonical	3	38	junction_4	6.74536878161602	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGTGGTGCATGCACAGT	9755	False	NA	NA	False	NA	NA	NA	72405536	72409630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
tx.2707	chr11	+	1259	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	5	3	5	-3	multi-exon	FALSE	canonical	3	238	junction_3	30.2691628926573	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATGATGTAAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	53215510	53224125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
tx.27070	chr6	+	1598	3	NNC	ENSMUSG00000035104.15	novel	515	3	NA	NA	285	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCGTGTCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	82018308	82070080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_82018413_82048035_82048224_82068774
tx.27071	chr6	-	1696	5	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	35	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	11.7686022959398	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCGTATGAATGAGC	NA	False	NA	NA	False	NA	NA	NA	83010414	83007913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_83009042_83009285_83009397_83009515_83009610_83009747_83010048_83010351
tx.27072	chr6	-	2239	2	ISM	ENSMUSG00000030035.15	ENSMUST00000142493.2	620	3	-545	-590	-17	0	intron_retention	FALSE	canonical	3	165	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	83098404	83096025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_83097026_83097165
tx.27073	chr6	-	2884	5	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	255.470521782847	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTAGTGTGTGACCAGG	9712	False	NA	NA	False	NA	NA	NA	83752795	83745863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_83748286_83749223_83749292_83750691_83750846_83751999_83752080_83752635
tx.27075	chr6	-	5483	3	ISM	ENSMUSG00000068299.12	ENSMUST00000095757.4	3019	4	-81	-1	-81	1	intron_retention	FALSE	canonical	3	15	junction_1	0.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGTGGATCTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	85881947	85876031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_85878596_85878934_85879080_85879173
tx.27076	chr6	+	5909	11	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	-13	-9	intron_retention	FALSE	canonical	3	27	junction_6	51.9847092903288	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGCCATTTCTTAAAG	9731	False	NA	NA	False	NA	NA	NA	86381250	86410378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
tx.27077	chr6	+	1915	5	NNC	ENSMUSG00000097048.8	novel	609	5	NA	NA	-167	19	intron_retention	FALSE	canonical	1	2	junction_2	50.0967813337344	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTGTCTGTATG	NA	False	NA	NA	False	NA	NA	NA	86503624	86541450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_86504957_86509174_86509290_86524969_86525139_86540413_86540520_86541257
tx.27078	chr6	+	4539	7	ISM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	6574	3	-2412	-3	3prime_fragment	FALSE	canonical	3	7	junction_6	3.76017139089283	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAGGGCAGCTGCCCAA	NA	False	NA	NA	False	NA	NA	NA	91140220	91151671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
tx.27079	chr6	+	1814	2	FSM	ENSMUSG00000034245.11	ENSMUST00000134154.2	815	2	408	-1407	408	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGCAGCTGCCCAAG	NA	False	NA	NA	False	NA	NA	NA	91149153	91151672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_91149326_91150030
tx.2708	chr11	+	9478	20	NIC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-60	-594	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	26.2976779780271	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTTTGCATGCACTGTG	NA	False	NA	NA	False	NA	NA	NA	53241599	53312063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
tx.27080	chr6	+	7677	16	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	32	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	13.3226623965832	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTGCTGCTCATCTT	NA	False	NA	NA	False	NA	NA	NA	92068402	92150039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_92068724_92082262_92082347_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134409_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
tx.27081	chr6	-	7632	7	ISM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	22732	-4490	22732	14	3prime_fragment	FALSE	canonical	3	13	junction_3	5.14511634681104	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCCTCGCTCTTGTTCC	NA	False	NA	NA	False	NA	NA	NA	92435641	92347874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455
tx.27082	chr6	-	415	2	NNC	ENSMUSG00000030020.14	novel	7754	9	NA	NA	-168	-329961	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGATGGTCTTAAACACAC	NA	False	NA	NA	False	NA	NA	NA	92683304	92682325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_92682413_92682976
tx.27083	chr6	+	870	5	NNC	ENSMUSG00000048636.8	novel	2239	5	NA	NA	-61	-4746	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTTTTTCCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	92793397	92815700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_92793642_92804897_92805085_92808917_92809046_92811419_92811468_92815437
tx.27084	chr6	-	4976	24	FSM	ENSMUSG00000030064.17	ENSMUST00000113355.9	4913	24	-64	1	-64	-1	multi-exon	TRUE	canonical	0	0	junction_20	23.7882911898179	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGTTTGGATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	97594566	97263828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97389448_97389542_97398522_97398618_97400419_97400486_97505690_97505813_97594150
tx.27085	chr6	-	2899	15	NIC	ENSMUSG00000030067.18	novel	2198	17	NA	NA	-4	44	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	8.09036968454799	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAGAAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99005278	98906105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_98907196_98912234_98912402_98916679_98916750_98917955_98918126_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
tx.27086	chr6	-	2863	8	NNC	ENSMUSG00000093661.2	novel	2515	7	NA	NA	-25705	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	1.98976975388345	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGGCTCATGTTAATGC	150	False	NA	NA	False	NA	NA	NA	99669437	99602095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99646383_99646529_99669090
tx.27087	chr6	-	1539	7	NIC	ENSMUSG00000035378.18	novel	1638	8	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	79.4342845096219	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGTGTAAATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	100648120	100550041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_100550750_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
tx.27088	chr6	-	2810	13	NNC	ENSMUSG00000030075.11	novel	5294	23	NA	NA	8684	-77889	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	2.25308430576596	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGCAAGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	102541378	102218155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_102219127_102222005_102222134_102242279_102242431_102244334_102244465_102246064_102246202_102250600_102250786_102254179_102254283_102255238_102255443_102314258_102314355_102397213_102397390_102414763_102414891_102441489_102441625_102541111
tx.27089	chr6	-	587	2	Intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGCTTCAGAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	108189884	108189216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_-_108189735_108189815
tx.2709	chr11	+	9587	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-81	593	-81	-593	multi-exon	FALSE	canonical	3	75	junction_1	17.4421185639818	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCATGCACTGTGC	NA	False	NA	NA	False	NA	NA	NA	53241578	53312064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
tx.27090	chr6	-	6987	14	ISM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	175702	5	-4627	-2	3prime_fragment	TRUE	canonical	3	12	junction_1	6.51443549530466	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATAGTCTGTGGTTG	9869	False	NA	NA	False	NA	NA	NA	112748525	112694936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327
tx.27091	chr6	+	7199	25	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	25.2517532394617	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCATCATAATGTTAAC	7845	False	NA	NA	False	NA	NA	NA	113054327	113130383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086384_113086578_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
tx.27092	chr6	+	7008	24	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	23.2069672088392	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAATGTTAACAATGTG	7849	False	NA	NA	False	NA	NA	NA	113054331	113130389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
tx.27093	chr6	-	4730	4	FSM	ENSMUSG00000042873.12	ENSMUST00000162280.2	4762	4	36	-4	36	4	multi-exon	FALSE	canonical	1	2	junction_1	1.88561808316413	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGCTGCTGCTTCTGA	NA	False	NA	NA	False	NA	NA	NA	113172309	113145046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113148920_113153406_113153644_113170778_113171265_113172175
tx.27094	chr6	+	1639	8	NNC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.464420951042	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2315	False	NA	NA	False	NA	NA	NA	113303939	113311145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_113304324_113304622_113304724_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
tx.27095	chr6	-	4363	3	FSM	ENSMUSG00000045009.10	ENSMUST00000205075.2	1956	3	-34	-2373	4	-2	multi-exon	FALSE	canonical	2	4	junction_2	5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGCCTCGCTCTGGTC	4289	False	NA	NA	False	NA	NA	NA	113478888	113470887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_113474049_113474232_113475357_113478810
tx.27096	chr6	+	2657	13	FSM	ENSMUSG00000009394.14	ENSMUST00000009538.12	2708	13	42	9	9	-9	multi-exon	FALSE	canonical	0	0	junction_1	2.49861072509416	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCAGCCCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	115111919	115258958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_115112422_115212974_115213033_115214215_115214308_115216319_115216477_115221106_115221197_115231123_115231187_115231550_115231694_115238615_115238691_115239482_115239586_115240792_115240943_115251156_115251218_115255061_115255315_115258048
tx.27097	chr6	-	1362	10	NIC	ENSMUSG00000059900.15	novel	1554	12	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_9	22.2782626713647	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACTAAATATTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	115736247	115706091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115719270_115719349_115735898
tx.27098	chr6	+	5790	5	NIC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	17640	-268	intron_retention	FALSE	canonical	3	54	junction_1	14.142135623731	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTTAAGCTAGAGCCCA	6862	False	NA	NA	False	NA	NA	NA	115769138	115782250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
tx.27099	chr6	-	5946	4	ISM	ENSMUSG00000030126.18	ENSMUST00000088896.10	5838	6	-49	20274	-49	4883	5prime_fragment	FALSE	canonical	2	10	junction_2	4.49691252107735	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGTGTGGTTGGTTGGT	NA	False	NA	NA	False	NA	NA	NA	116170496	116015845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_116020767_116110727_116111419_116115155_116115212_116170218
tx.271	chr1	-	3967	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	-323	-3	183	3	multi-exon	FALSE	canonical	3	220	junction_1	0	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCAGTCCTCATTTAAT	357	False	NA	NA	False	NA	NA	NA	52992326	52961479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_52964894_52991773
tx.2710	chr11	+	7602	11	ISM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	48985	593	-4729	-593	3prime_fragment	FALSE	canonical	3	95	junction_4	10.1666120217111	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCATGCACTGTGC	NA	False	NA	NA	False	NA	NA	NA	53290644	53312064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
tx.27100	chr6	-	4007	16	ISM	ENSMUSG00000051331.17	ENSMUST00000188181.7	7577	42	130445	0	417	0	3prime_fragment	TRUE	canonical	0	0	junction_2	1.02415276638248	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGAAAAGCTTTACCTT	NA	False	NA	NA	False	NA	NA	NA	118604490	118569279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_118571156_118572816_118573153_118574888_118574993_118575621_118575729_118578093_118578220_118579002_118579356_118580808_118580944_118581397_118581526_118583173_118583276_118587448_118587552_118589527_118589625_118590203_118590332_118590872_118591039_118601327_118601420_118602449_118602516_118604402
tx.27101	chr6	-	8711	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-4	0	intron_retention	FALSE	canonical	3	7	junction_19	35.7214523873935	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTGTGTGCTGCAGCC	NA	False	NA	NA	False	NA	NA	NA	119825132	119547764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119817033_119817123_119824837
tx.27102	chr6	-	5253	19	NNC	ENSMUSG00000030172.16	novel	2304	6	NA	NA	1	5322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.169213888799	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGGTGACTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	119825110	119588905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_119590640_119595806_119595874_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
tx.27103	chr6	+	2829	9	NIC	ENSMUSG00000030166.15	novel	1693	12	NA	NA	-20	0	intron_retention	FALSE	canonical	3	31	junction_8	11.4209237805004	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTTTGGCTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	119879638	119899784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_119879797_119888008_119888103_119889962_119891199_119892194_119892314_119892927_119893004_119895547_119896039_119897070_119897152_119897767_119897990_119899432
tx.27104	chr6	-	10063	5	ISM	ENSMUSG00000051586.18	ENSMUST00000151602.4	992	8	2879	-6341	1967	3267	intron_retention	FALSE	canonical	3	24	junction_1	1.92028643696715	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTCTTTATTATTTT	1090	False	NA	NA	False	NA	NA	NA	120932717	120905400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335
tx.27105	chr6	-	4648	3	ISM	ENSMUSG00000051586.18	ENSMUST00000150503.4	2810	9	-20	38969	-20	4	5prime_fragment	FALSE	canonical	3	8	junction_2	19	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTGAGTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	120980133	120974272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_120978657_120979747_120979837_120979958
tx.27106	chr6	+	1595	7	NNC	ENSMUSG00000049037.9	novel	1558	6	NA	NA	-695	-13	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.84573486395988	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGATCTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122898111	122911565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_122898238_122898882_122899039_122901675_122901790_122904922_122905025_122907635_122907788_122909107_122909224_122910736
tx.27107	chr6	-	2059	3	FSM	ENSMUSG00000004267.17	ENSMUST00000139763.8	898	3	-359	-802	-33	9	multi-exon	FALSE	canonical	3	44	junction_1	9	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAGGACTCTTACTCT	8904	False	NA	NA	False	NA	NA	NA	124740608	124737318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_124738326_124738610_124738670_124739615
tx.27108	chr6	+	1222	3	NNC	ENSMUSG00000038451.14	novel	1213	3	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	14.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTTTCATTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	124785628	124787580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_124785759_124786189_124786933_124787231
tx.27109	chr6	+	5272	7	ISM	ENSMUSG00000038271.18	ENSMUST00000141230.8	3056	8	1350	-7	590	1	3prime_fragment	FALSE	canonical	3	26	junction_3	11.6999525165228	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGAGCCTGCTTCACCTC	1091	False	NA	NA	False	NA	NA	NA	125123578	125138746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
tx.2711	chr11	-	478	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	12	1031	12	0	multi-exon	FALSE	canonical	3	5710	junction_1	0	702	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2959	False	NA	NA	False	NA	NA	NA	53321642	53319779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_53319978_53321362
tx.27110	chr6	+	989	4	ISM	ENSMUSG00000001930.18	ENSMUST00000112253.6	2184	10	35460	295	-15127	2	3prime_fragment	FALSE	canonical	3	17	junction_3	6.84754619472471	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGAAGCCCTTATTGCT	NA	False	NA	NA	False	NA	NA	NA	125565385	125569139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_+_125565597_125567141_125567265_125568112_125568225_125568596
tx.27112	chr6	+	2670	5	NNC	ENSMUSG00000059659.8	novel	907	5	NA	NA	32	1233	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	2.91547594742265	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACACTCCAGAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	128415751	128481477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_128416351_128416477_128416660_128465853_128465987_128479128_128479327_128479919
tx.27113	chr6	-	6499	2	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53525	-1029	intron_retention	FALSE	canonical	3	31	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTGTAAAAATCAATTC	NA	False	NA	NA	False	NA	NA	NA	134326853	134286942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_134293294_134326705
tx.27114	chr6	-	620	2	Intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAATAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134326839	134316036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_-_134316523_134326705
tx.27115	chr6	-	7391	15	ISM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	80979	0	-14641	0	3prime_fragment	FALSE	canonical	3	65	junction_12	11.5228256171862	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGCTTTGTGTGATT	8273	False	NA	NA	False	NA	NA	NA	134462897	134423438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606
tx.27116	chr6	+	3530	3	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1215	0	intron_retention	FALSE	canonical	3	514	junction_2	7.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTGTGTGCACT	NA	False	NA	NA	False	NA	NA	NA	134994747	135000739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_134997650_134998411_134998542_135000241
tx.27117	chr6	-	6525	11	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	4	intron_retention	TRUE	canonical	3	113	junction_10	20.4560504496836	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGACCTATCTTAGAAT	6194	False	NA	NA	False	NA	NA	NA	142332799	142307097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_-_142308596_142309272_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
tx.27118	chr6	+	6291	2	NIC	ENSMUSG00000040370.14	novel	2436	3	NA	NA	2	588	intron_retention	FALSE	canonical	3	321	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATGGAAATTAGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	145156883	145163253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr6_+_145160998_145161076
tx.27119	chr6	-	1515	1	Intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCATTGTCATATGATT	NA	False	NA	NA	False	NA	NA	NA	145571067	145569552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_-_145569600_145571100
tx.2712	chr11	-	407	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	-2	0	2	0	multi-exon	FALSE	canonical	3	885	junction_2	2412.5	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2945	False	NA	NA	False	NA	NA	NA	53321656	53319779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_53319978_53321362_53321530_53321614
tx.27120	chr6	+	5794	6	NNC	ENSMUSG00000030259.13	novel	5446	5	NA	NA	-157	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.48074069840786	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTGTTGCTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	145692316	145766805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_+_145692693_145696217_145696409_145754109_145754289_145760778_145761669_145762223_145762369_145762792
tx.27121	chr6	+	6282	3	FSM	ENSMUSG00000030291.13	ENSMUST00000075077.3	1713	3	-4570	1	-1	-1	multi-exon	FALSE	canonical	3	254	junction_2	43	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGTTTTTGTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	146544087	146552099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_146549778_146550647_146550749_146551608
tx.27122	chr6	-	4173	20	FSM	ENSMUSG00000030306.15	ENSMUST00000060095.15	8383	20	45	4165	45	-4165	multi-exon	FALSE	canonical	0	0	junction_15	3.28599816395536	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTGTTTTTTTCCTCT	8752	False	NA	NA	False	NA	NA	NA	148345842	148138092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_-_148139433_148144685_148144764_148146181_148146305_148147208_148147347_148148231_148148377_148148900_148149037_148150985_148151089_148164280_148164390_148172873_148173018_148186354_148186469_148196012_148196181_148207495_148207618_148226614_148226805_148237140_148237245_148237748_148237831_148312535_148312740_148314139_148314317_148317207_148317282_148327304_148327483_148345398
tx.27123	chr6	-	2369	4	NNC	ENSMUSG00000030309.17	novel	598	4	NA	NA	-20	-1337	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.873233599564	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTATGTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	148797680	148787371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr6_-_148789293_148792106_148792170_148796434_148796655_148797515
tx.27124	chr6	+	1779	2	FSM	ENSMUSG00000085355.3	ENSMUST00000154673.2	1747	2	-32	0	-32	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCAGTAATTCCGTCTTG	NA	False	NA	NA	False	NA	NA	NA	148846332	148848627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr6_+_148847919_148848434
tx.27125	chr6	-	165	2	Intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAGAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	148961546	148927812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr6_-_148927929_148961497
tx.27126	chr7	+	2607	4	NNC	ENSMUSG00000078815.9	novel	1977	4	NA	NA	-603	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	11.115554667022	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCTGTCTGTGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	3472107	3484180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_3473509_3478953_3479029_3480334_3480503_3483217
tx.27127	chr7	+	7368	12	NIC	ENSMUSG00000030428.17	novel	1491	13	NA	NA	65	0	intron_retention	FALSE	canonical	3	27	junction_11	14.3365682812396	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTGAGAGGATAAAAACT	579	False	NA	NA	False	NA	NA	NA	4122817	4138346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
tx.27128	chr7	-	3052	8	NIC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	9.2493794607078	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTCATTGTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	4448630	4428664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4446735_4446771_4447201_4447321_4448445
tx.27129	chr7	-	3071	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-3	0	intron_retention	FALSE	canonical	3	198	junction_15	26.2200305110425	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9938	False	NA	NA	False	NA	NA	NA	4504682	4484518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
tx.2713	chr11	+	4571	10	NIC	ENSMUSG00000018398.19	novel	4563	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.8486099428282	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	53410611	53434922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
tx.27130	chr7	-	755	3	ISM	ENSMUSG00000064179.14	ENSMUST00000086502.5	485	4	-68	-127	-68	4	intron_retention	FALSE	canonical	3	51	junction_2	3	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCAGGGTTGTTATTA	7262	False	NA	NA	False	NA	NA	NA	4511092	4507657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_4507800_4510381_4510423_4510520
tx.27131	chr7	-	2198	7	Fusion	ENSMUSG00000055809.8_ENSMUSG00000035458.16	novel	912	8	NA	NA	409	0	intron_retention	FALSE	non_canonical	0	0	junction_6	10.1762250149825	5	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGTGTGTCTGCTAAC	5625	False	NA	NA	False	NA	NA	NA	4526819	4521303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525296
tx.27132	chr7	-	2135	2	FSM	ENSMUSG00000043290.7	ENSMUST00000062428.5	2153	2	14	4	14	-4	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGGAGTGTCTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	5041431	5037441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_5039479_5041333
tx.27133	chr7	-	1001	2	FSM	ENSMUSG00000046792.9	ENSMUST00000207957.2	880	2	-52	-69	-7	2	multi-exon	FALSE	canonical	3	164	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCGAAGTTCATGCCG	9619	False	NA	NA	False	NA	NA	NA	6158977	6145282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_6146150_6158843
tx.27134	chr7	+	3498	5	NNC	ENSMUSG00000054893.16	novel	3672	5	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	18.389874931603	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAGGTTCTTTTACAT	2977	False	NA	NA	False	NA	NA	NA	6289582	6310676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_6289654_6292356_6292437_6293534_6293699_6296847_6296941_6307586
tx.27135	chr7	-	2637	6	NNC	ENSMUSG00000030443.17	novel	2550	5	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.3421467790783	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTTGATTATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	6334278	6318661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_6320779_6326645_6326742_6328451_6328579_6330567_6330664_6332253_6332316_6334139
tx.27136	chr7	+	4063	4	FSM	ENSMUSG00000055150.16	ENSMUST00000108559.3	1539	4	-402	-2122	-402	-96	multi-exon	FALSE	canonical	2	12	junction_1	4.49691252107735	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATCCTGGGATCTGAT	NA	False	NA	NA	False	NA	NA	NA	6373960	6384612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_6374396_6376125_6376253_6378517_6378614_6381207
tx.27137	chr7	-	3092	4	NNC	ENSMUSG00000108043.3	novel	3226	7	NA	NA	1450	2413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.09901951359278	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTCATAAAAATTGGAGT	NA	False	NA	NA	False	NA	NA	NA	6977013	6963920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_6966692_6968979_6969038_6976160_6976339_6976928
tx.27138	chr7	+	5022	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-12	1087	intron_retention	FALSE	canonical	1	1	junction_3	12.4398553046247	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATGGTAGTCTGTTTG	3142	False	NA	NA	False	NA	NA	NA	6980232	6995173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_6980472_6984231_6984357_6985317_6985477_6987994_6989202_6991881
tx.27139	chr7	-	5106	2	ISM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	-29	6	-29	-6	intron_retention	FALSE	canonical	3	13	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTGGTGGTTGCG	NA	False	NA	NA	False	NA	NA	NA	7139783	7133679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_7136168_7137165
tx.2714	chr11	+	4583	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	-21	1	9	0	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	53410605	53434922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
tx.27140	chr7	-	990	2	ISM	ENSMUSG00000000605.10	ENSMUST00000210989.2	658	3	72	0	48	0	intron_retention	FALSE	canonical	2	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACGGACCGCTGTGAAA	NA	False	NA	NA	False	NA	NA	NA	7302484	7300999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_7301196_7301690
tx.27141	chr7	-	1430	5	FSM	ENSMUSG00000092490.8	ENSMUST00000174729.2	825	5	-174	-431	25	1	multi-exon	FALSE	canonical	3	19	junction_4	6.67083203206317	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCTTTTCAAAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	8865825	8858844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865573
tx.27142	chr7	-	5565	5	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	26	junction_3	9.3407708461347	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGCCTCATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	12514591	12502019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12509586_12514498
tx.27143	chr7	+	189	2	Intergenic	novelGene_351	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	3	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTGTCTCAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	12549583	12688000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_+_12549634_12687861
tx.27144	chr7	+	4327	4	ISM	ENSMUSG00000033961.17	ENSMUST00000108536.3	3705	5	-360	-71	-15	40	intron_retention	FALSE	canonical	3	25	junction_1	4.96655480858378	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTTTCAACACT	NA	False	NA	NA	False	NA	NA	NA	12711804	12718307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_12713306_12713377_12713574_12713811_12713907_12715772
tx.27145	chr7	+	4417	3	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	-14	59	intron_retention	FALSE	canonical	3	35	junction_1	0.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATTTGTGCTCACTAA	NA	False	NA	NA	False	NA	NA	NA	12711805	12718326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_12713574_12713811_12713907_12715772
tx.27146	chr7	+	3940	2	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	344	47	intron_retention	FALSE	canonical	3	36	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCAACACTGTCCATT	NA	False	NA	NA	False	NA	NA	NA	12712508	12718314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_12713907_12715772
tx.27147	chr7	-	2528	6	FSM	ENSMUSG00000030380.18	ENSMUST00000182515.8	3340	6	14	798	14	10	multi-exon	FALSE	canonical	2	4	junction_5	2.63818119165458	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTCCCCAACCTGCACA	NA	False	NA	NA	False	NA	NA	NA	12788578	12777085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_12778628_12785417_12785539_12785659_12785731_12786109_12786294_12786669_12787109_12788407
tx.27149	chr7	+	2023	12	FSM	ENSMUSG00000041420.19	ENSMUST00000175946.8	1925	12	-98	0	15	0	multi-exon	FALSE	canonical	3	10	junction_3	3.73723723474445	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTCTCATTTGT	7554	False	NA	NA	False	NA	NA	NA	15909214	15920426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
tx.2715	chr11	+	4397	10	NIC	ENSMUSG00000018398.19	novel	4436	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.2766184179422	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	53410605	53434922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
tx.27150	chr7	+	1826	13	FSM	ENSMUSG00000041420.19	ENSMUST00000002495.18	1731	13	-98	3	-56	0	multi-exon	FALSE	canonical	3	8	junction_5	4.17997873466148	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTCTCATTTGT	7596	False	NA	NA	False	NA	NA	NA	15909256	15920426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912875_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
tx.27151	chr7	+	5662	12	ISM	ENSMUSG00000059273.10	ENSMUST00000209289.2	5853	14	15594	1	1956	0	3prime_fragment	FALSE	canonical	0	0	junction_8	28.3012133606662	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTCTAGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	16150725	16171620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
tx.27152	chr7	+	5113	9	ISM	ENSMUSG00000059273.10	ENSMUST00000209289.2	5853	14	20170	3	6532	-2	3prime_fragment	FALSE	canonical	0	0	junction_5	32.8555075291799	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGTGAGTCTAGTCTC	NA	False	NA	NA	False	NA	NA	NA	16155301	16171618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
tx.27153	chr7	+	1657	2	ISM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	1957	206	1957	-206	3prime_fragment	FALSE	canonical	2	8	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAGCTATTGAGGGTA	NA	False	NA	NA	False	NA	NA	NA	18830475	18832268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_18830945_18831080
tx.27154	chr7	-	2890	8	NNC	ENSMUSG00000030407.3	novel	2710	7	NA	NA	-468	38	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_7	16.8098610515206	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAATAAAATG	6736	False	NA	NA	False	NA	NA	NA	18883684	18873588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900_18883123_18883448
tx.27155	chr7	+	2542	21	NNC	ENSMUSG00000040811.16	novel	2765	22	NA	NA	-1839	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	49.1734430358502	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	NA	False	NA	NA	NA	18913255	18940407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_18913371_18913450_18913575_18913678_18913781_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
tx.27156	chr7	-	1554	5	NNC	ENSMUSG00000030402.6	novel	1648	5	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.779030568655	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTCTTCGTTGTTGT	9793	False	NA	NA	False	NA	NA	NA	19013751	19010729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194_19012313_19012887
tx.27157	chr7	-	1532	5	FSM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	116	0	116	0	multi-exon	FALSE	canonical	3	13	junction_1	5.35607132140714	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTCTTCGTTGTTGT	9671	False	NA	NA	False	NA	NA	NA	19013873	19010729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194_19012313_19013031
tx.27158	chr7	-	1090	4	ISM	ENSMUSG00000014686.9	ENSMUST00000014830.8	1635	6	3213	1	-1850	0	3prime_fragment	FALSE	canonical	0	0	junction_3	1.69967317119759	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGTGTCAGCCTCTCC	808	False	NA	NA	False	NA	NA	NA	19592011	19586022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_19586239_19587496_19587824_19589998_19590278_19591743
tx.27159	chr7	+	3340	3	ISM	ENSMUSG00000047603.10	ENSMUST00000205680.2	1332	5	2	907	2	-907	intron_retention	FALSE	canonical	3	44	junction_2	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTTTCTTCTCATT	NA	False	NA	NA	False	NA	NA	NA	23833622	23839462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_23833913_23834682_23834741_23836470
tx.2716	chr11	+	4357	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	79	0	25	0	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	53410651	53434922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
tx.27160	chr7	+	4511	4	NNC	ENSMUSG00000030486.10	novel	2562	4	NA	NA	-66	1923	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.05480466765633	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATATGAGTTGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	23954152	23963793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_23954238_23955257_23955316_23957877_23958005_23959552
tx.27161	chr7	-	1067	4	NNC	ENSMUSG00000066721.4	novel	2741	4	NA	NA	0	-1604	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2.16024689946929	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTGCTGTATGTGTGG	NA	False	NA	NA	False	NA	NA	NA	24287066	24284866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_24285564_24286078_24286243_24286582_24286668_24286945
tx.27162	chr7	+	1064	5	ISM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	4120	0	4120	0	3prime_fragment	FALSE	canonical	3	13	junction_4	5.31507290636732	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGAGAGTTGATTATC	NA	False	NA	NA	False	NA	NA	NA	24573601	24577076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
tx.27163	chr7	+	6629	20	ISM	ENSMUSG00000045039.10	ENSMUST00000128119.2	10040	41	25364	-701	-3453	701	3prime_fragment	FALSE	canonical	3	17	junction_1	7.04909573580334	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTATGTGTGTGCG	NA	False	NA	NA	False	NA	NA	NA	25041952	25066043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
tx.27164	chr7	-	6887	2	ISM	ENSMUSG00000074272.11	ENSMUST00000098666.9	3656	8	8064	-2	7165	2	intron_retention	FALSE	canonical	3	28	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTGTGGGGTTTTCTG	9663	False	NA	NA	False	NA	NA	NA	25168964	25161129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_25163326_25164273
tx.27165	chr7	-	1257	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	80	-1	-12	1	multi-exon	FALSE	canonical	3	597	junction_6	627.600567417065	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	NA	False	NA	NA	NA	26895590	26886430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
tx.27166	chr7	+	2881	6	ISM	ENSMUSG00000078786.10_ENSMUSG00000080533.3	ENSMUST00000179391.8	1748	7	1465	-1800	123	465	3prime_fragment	FALSE	canonical	2	9	junction_4	4.47213595499958	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCCCCCTAACTTCTCC	NA	False	NA	NA	False	NA	NA	NA	26896670	26905545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
tx.27167	chr7	+	4446	4	FSM	ENSMUSG00000057093.15	ENSMUST00000076421.7	1947	4	-82	-2417	-57	0	multi-exon	FALSE	canonical	3	20	junction_2	19.1369334592098	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	NA	False	NA	NA	NA	27391844	27405909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_27391960_27392906_27393034_27398077_27398177_27401804
tx.27168	chr7	-	2615	3	FSM	ENSMUSG00000070709.13	ENSMUST00000137668.2	877	3	-16	-1722	-16	2	multi-exon	FALSE	canonical	3	7	junction_2	23.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTCTCTCTTATGAAGA	NA	False	NA	NA	False	NA	NA	NA	27628901	27623455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_27625836_27626825_27626879_27628719
tx.27169	chr7	+	1090	3	ISM	ENSMUSG00000002409.19	ENSMUST00000172467.8	2523	11	5524	0	5524	0	3prime_fragment	FALSE	canonical	3	13	junction_1	3	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	NA	False	NA	NA	False	NA	NA	NA	27885214	27886719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_27885455_27885786_27885894_27885976
tx.2717	chr11	+	4204	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	2	-1916	2	1054	multi-exon	FALSE	canonical	2	5	junction_9	19.4950915296646	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAATCAGGTGGACATTG	921	False	NA	NA	False	NA	NA	NA	53458207	53493848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
tx.27170	chr7	-	5217	19	NNC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	-63	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	8.3483198575788	2	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	28072087	28059027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070302_28070468_28070539_28070671_28071284
tx.27171	chr7	-	5313	18	NNC	ENSMUSG00000037552.18	novel	4623	19	NA	NA	-87	1	intron_retention	FALSE	non_canonical	0	0	junction_3	7.97096808298282	2	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	28072111	28059027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070302_28070671_28071284
tx.27172	chr7	+	1972	5	FSM	ENSMUSG00000030600.16	ENSMUST00000189877.7	1852	5	-130	10	38	-10	multi-exon	TRUE	canonical	1	4	junction_4	31.2519999360041	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATAATTACCTAACC	4016	False	NA	NA	False	NA	NA	NA	28151442	28161547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_28151762_28153921_28153955_28157383_28157439_28158051_28159489_28161419
tx.27173	chr7	+	4413	3	NIC	ENSMUSG00000037463.15	novel	2031	5	NA	NA	78	0	intron_retention	FALSE	canonical	3	57	junction_2	5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTTCATATCTTTTT	9218	False	NA	NA	False	NA	NA	NA	28392646	28398760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_28394268_28394430_28394527_28396064
tx.27175	chr7	+	3587	5	NIC	ENSMUSG00000047473.15	novel	3558	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	10.1827059272082	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGATGTTAAACATGAATT	NA	False	NA	NA	False	NA	NA	NA	29483437	29494127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_29484327_29485599_29485729_29487473_29487601_29488762_29488862_29491784
tx.27176	chr7	+	4361	2	NNC	ENSMUSG00000099689.7	novel	3208	4	NA	NA	3712	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAGTTTCATAATTTT	NA	False	NA	NA	False	NA	NA	NA	29611653	29616231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_29612188_29612404
tx.27177	chr7	+	3987	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-17	1828	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	12.6959639255946	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTAGTGTATGAGGT	5242	False	NA	NA	False	NA	NA	NA	29821349	29836203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_29821502_29825192_29825267_29830097_29830253_29830956_29831050_29832690
tx.27178	chr7	+	3351	14	NIC	ENSMUSG00000013921.16	novel	3300	14	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	3.75113395084203	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTCAGGTCACTGG	7131	False	NA	NA	False	NA	NA	NA	29991113	30007792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_29991268_29991579_29991792_29996272_29996413_29996497_29996592_29996779_29996942_29997344_29997464_29998236_29998474_30001270_30001407_30001560_30001690_30002794_30002939_30003032_30003157_30003336_30003402_30005183_30005257_30006230
tx.27179	chr7	+	4318	2	Fusion	ENSMUSG00002076496.1_ENSMUSG00000042831.14	novel	545	3	NA	NA	-1	0	intron_retention	FALSE	canonical	3	509	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30008200	30013729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_+_30012133_30013343
tx.2718	chr11	-	5150	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	2	1	2	-1	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	505	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGGCATGGATGTGGG	NA	False	NA	NA	False	NA	NA	NA	53598144	53540346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
tx.27180	chr7	+	2965	18	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5563	6	intron_retention	FALSE	canonical	2	33	junction_1	11.8248462831183	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30164712	30186654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
tx.27181	chr7	-	5342	30	ISM	ENSMUSG00000006307.17	ENSMUST00000006470.14	8469	37	5309	0	1666	0	3prime_fragment	FALSE	canonical	3	55	junction_24	34.2649673936444	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	NA	False	NA	NA	NA	30282833	30268282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608
tx.27182	chr7	-	499	3	ISM	ENSMUSG00000006311.9	ENSMUST00000108147.3	1048	6	1081	-8	1081	8	3prime_fragment	FALSE	canonical	3	44	junction_1	1	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCGTGTCTGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	30334196	30333032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_30333260_30333413_30333527_30334037
tx.27183	chr7	+	1566	3	Intergenic	novelGene_354	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCGAGTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	30525566	30528768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_+_30525681_30525896_30526050_30527469
tx.27184	chr7	+	4054	2	NNC	ENSMUSG00000100029.2	novel	928	2	NA	NA	-3650	-799	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTCAAGAAGAATCACAC	NA	False	NA	NA	False	NA	NA	NA	30580805	30585072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_30581905_30582117
tx.27185	chr7	-	414	6	NNC	ENSMUSG00000009687.15	novel	500	7	NA	NA	895	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	40.8538859840775	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCTCTGTCTTCTG	7755	False	NA	NA	False	NA	NA	NA	30736468	30732156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_30732306_30732397_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736435
tx.27186	chr7	-	7399	12	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	60	junction_11	27.1360210119987	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATACTCTGTATCTTT	9812	False	NA	NA	False	NA	NA	NA	34012972	33936139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
tx.27187	chr7	-	3997	2	FSM	ENSMUSG00000056216.10	ENSMUST00000206505.2	399	2	-189	-3409	-189	-1034	multi-exon	FALSE	canonical	2	26	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACAACGACTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	34755597	34746880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_34750358_34755077
tx.27188	chr7	-	4233	7	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-86	0	intron_retention	FALSE	canonical	3	19	junction_5	2.49443825784929	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTGTTCCAGTCTCTAC	NA	False	NA	NA	False	NA	NA	NA	34914803	34900302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_34902095_34902353_34903807_34904105_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
tx.27189	chr7	+	3484	5	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2075	1500	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	2.44948974278318	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATTACTTTCATTA	NA	False	NA	NA	False	NA	NA	NA	39136786	39149725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_39136985_39138848_39138976_39143154_39143248_39145691_39145802_39146769
tx.2719	chr11	+	2154	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	-18	0	-18	0	multi-exon	FALSE	canonical	3	46	junction_1	9.82940913537621	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGGCTTTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	53660822	53668149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
tx.27190	chr7	-	3144	2	FSM	ENSMUSG00000074166.8	ENSMUST00000205995.2	1337	2	-11	-1796	8	1796	multi-exon	FALSE	canonical	2	6	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAAAGCCACATGAT	NA	False	NA	NA	False	NA	NA	NA	41148843	41137474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_41140493_41148717
tx.27191	chr7	+	346	3	Antisense	novelGene_ENSMUSG00000108491.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	5.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCGGCTGCAGACTGTT	NA	False	NA	NA	False	NA	NA	NA	42155256	42158297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_+_42155413_42157017_42157122_42158211
tx.27192	chr7	+	1175	4	ISM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	1665	-5	1665	5	3prime_fragment	FALSE	canonical	2	31	junction_2	18.6726180988812	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGCCTCTGTCTG	35	False	NA	NA	False	NA	NA	NA	43432123	43434839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_43432344_43432880_43433156_43433739_43433874_43434293
tx.27194	chr7	-	2758	2	ISM	ENSMUSG00000008028.16	ENSMUST00000150886.2	820	5	10132	-194	10132	0	intron_retention	FALSE	canonical	3	32	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCTCTCGGCAAAGT	3225	False	NA	NA	False	NA	NA	NA	44012892	44009466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_44009806_44010473
tx.27195	chr7	-	1207	5	NNC	ENSMUSG00000008028.16	novel	913	6	NA	NA	-247	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	9.39081998549647	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCTCTCGGCAAAGT	NA	False	NA	NA	False	NA	NA	NA	44024185	44009466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_44009907_44010473_44010608_44012075_44012197_44012366_44012440_44023746
tx.27196	chr7	+	5343	8	NIC	ENSMUSG00000030731.14	novel	2096	10	NA	NA	127	1	intron_retention	FALSE	canonical	2	10	junction_2	3.23879544250132	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTCTCCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	44034154	44049454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_44035546_44039919_44040449_44041822_44042196_44042772_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
tx.27197	chr7	+	1389	9	FSM	ENSMUSG00000002204.10	ENSMUST00000002274.10	1560	9	171	0	119	0	multi-exon	FALSE	canonical	1	2	junction_5	2.82842712474619	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTTCCATGGAAGGAT	2713	False	NA	NA	False	NA	NA	NA	44221974	44236286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_44222114_44230627_44230764_44230844_44230969_44231106_44231226_44231765_44231966_44234422_44234546_44234642_44234788_44235137_44235237_44235982
tx.27198	chr7	+	640	7	NIC	ENSMUSG00000066500.6	novel	704	7	NA	NA	83	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	1.70782512765993	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTGTACATTCCCT	271	False	NA	NA	False	NA	NA	NA	44358248	44369268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_44358399_44358479_44358555_44359678_44359766_44359934_44359956_44362421_44362503_44364751_44364876_44369166
tx.27199	chr7	+	3631	2	NIC	ENSMUSG00000011658.17	novel	2717	8	NA	NA	-15	9	intron_retention	FALSE	canonical	3	116	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGCCCCCACCCCGGGCT	NA	False	NA	NA	False	NA	NA	NA	44545660	44550037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_44548811_44549556
tx.272	chr1	-	3194	13	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	39.2778563569857	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTTTTCACGTCC	6062	False	NA	NA	False	NA	NA	NA	53336167	53228349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53335890
tx.2720	chr11	+	2204	10	NIC	ENSMUSG00000018899.18	novel	2069	10	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	19.5170074613634	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGGCTTTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	53661251	53668149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_53661584_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
tx.27200	chr7	-	1423	8	NIC	ENSMUSG00000007837.12	novel	1623	8	NA	NA	-26	18	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	14.3612289849854	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCGCGCGGTGGAACTGA	NA	False	NA	NA	False	NA	NA	NA	44711854	44702989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709840_44710164_44710317_44711011_44711076_44711801
tx.27201	chr7	-	1088	10	NIC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	-46	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	12.720159949301	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCACAGGATGATTTC	9359	False	NA	NA	False	NA	NA	NA	44839536	44833050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373
tx.27202	chr7	-	1122	7	FSM	ENSMUSG00000011382.9	ENSMUST00000011526.7	5323	7	4	4197	4	446	multi-exon	FALSE	canonical	2	18	junction_4	6.73300329224139	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	45138225	45124607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_45124800_45125028_45125177_45128432_45128558_45131212_45131466_45136164_45136329_45137483_45137596_45138097
tx.27203	chr7	+	1056	2	NNC	ENSMUSG00000110020.2	novel	1235	2	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_1	0	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGGTTGTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	45480299	45484673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_45480327_45483644
tx.27204	chr7	+	2163	4	NIC	ENSMUSG00000002778.15	novel	1599	5	NA	NA	-28	-3	intron_retention	FALSE	canonical	3	225	junction_2	12.2292908852294	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTTGCTGTTCCCTG	4031	False	NA	NA	False	NA	NA	NA	45522282	45533150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_45523284_45523466_45523626_45530923_45531177_45532400
tx.27205	chr7	+	2661	11	NIC	ENSMUSG00000040189.19	novel	2460	13	NA	NA	632	10	intron_retention	FALSE	canonical	3	16	junction_3	3.7	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGTGTGTTCAGACATG	3184	False	NA	NA	False	NA	NA	NA	45578457	45598397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
tx.27206	chr7	-	4549	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107653.8	4702	23	153	0	-25	0	multi-exon	FALSE	canonical	2	3	junction_14	16.3614266184748	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAACATGGATATGAGAT	NA	False	NA	NA	False	NA	NA	NA	46445152	46409895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427525_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
tx.27207	chr7	+	6908	31	NIC	ENSMUSG00000052512.18	novel	1495	5	NA	NA	-212	333	combination_of_known_splicesites	TRUE	canonical	1	1	junction_1	4.61218193724209	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGATTCCACTTGGTGC	NA	False	NA	NA	False	NA	NA	NA	49100295	49256902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_49100632_49102146_49103255_49107843_49107957_49111656_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
tx.27208	chr7	+	5548	9	FSM	ENSMUSG00000033676.14	ENSMUST00000196198.5	4348	9	-32	-1168	-32	0	multi-exon	FALSE	canonical	1	4	junction_1	10.0739453542294	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGACTGATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	57240233	57478550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_57240397_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
tx.27209	chr7	+	3416	6	ISM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	7	33546	-4	-21059	5prime_fragment	FALSE	canonical	3	23	junction_5	6.72309452558864	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGTTGATATGGGGAAA	NA	False	NA	NA	False	NA	NA	NA	57240916	57445004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239
tx.2721	chr11	+	2149	10	FSM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	-79	-1	-61	1	multi-exon	FALSE	canonical	1	2	junction_1	21.2573879677132	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	False	NA	NA	False	NA	NA	NA	53661241	53668150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_53661518_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
tx.27210	chr7	+	4950	21	NNC	ENSMUSG00000025324.9	novel	5419	21	NA	NA	-41	-396	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	4.33128156554154	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTAGATTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	58307952	58478772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474161_58474249_58476820_58476902_58476993_58477099_58477522_58477711_58477866
tx.27211	chr7	-	5193	11	NNC	ENSMUSG00000030525.9	novel	2078	10	NA	NA	10	3130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.26704891960966	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTACTGTTGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	62862307	62745309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_62747990_62748050_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855_62861996_62862169
tx.27212	chr7	+	3506	14	NIC	ENSMUSG00000033510.15	novel	3483	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	2.1973625933978	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGAGTGTTTTACATGC	NA	False	NA	NA	False	NA	NA	NA	63094496	63408776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_63094676_63265036_63265167_63299356_63299451_63300558_63300714_63335116_63335300_63346758_63346981_63377165_63377268_63378809_63378938_63379540_63379657_63383411_63383540_63385546_63385697_63404379_63404495_63404663_63404749_63407057
tx.27213	chr7	+	394	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206882.2	391	2	-6	3	-6	-3	multi-exon	FALSE	canonical	3	49	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATGTATTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	64042481	64061866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_64042592_64061582
tx.27214	chr7	+	793	4	NNC	ENSMUSG00000033429.11	novel	532	3	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	40.2022663816634	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTATTTGTTATTTG	NA	False	NA	NA	False	NA	NA	NA	64042481	64061868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_64042592_64048440_64048662_64049916_64050093_64061582
tx.27216	chr7	-	4409	6	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_1	28.6733325583198	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	66339342	66294312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_66297674_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
tx.27217	chr7	+	5883	7	NIC	ENSMUSG00000053091.17	novel	5088	8	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	44	junction_3	15.1767365837763	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCAAGTGTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	66339701	66367001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66360495_66361620_66361793_66363548
tx.27218	chr7	-	4298	23	NNC	ENSMUSG00000032776.10	novel	5802	23	NA	NA	-40	1104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	3.24355686816569	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTTGTCATCTCATGT	NA	False	NA	NA	False	NA	NA	NA	71956396	71729056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_71730606_71732834_71732933_71739918_71740029_71752891_71753002_71771445_71771488_71776885_71777009_71810887_71811008_71812945_71813021_71814357_71814460_71833552_71833656_71835510_71835614_71850093_71850188_71852036_71852224_71861342_71861409_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896855_71896919_71908846_71909380_71956218
tx.27219	chr7	+	1831	3	ISM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	-44	9366	-33	1082	5prime_fragment	FALSE	canonical	3	9	junction_1	6.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGGACTGTGCTTAGG	NA	False	NA	NA	False	NA	NA	NA	73025223	73060281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_73025637_73041128_73041245_73058979
tx.2722	chr11	-	3166	10	FSM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	-104	0	-104	0	multi-exon	FALSE	canonical	3	28	junction_7	3.67507453523138	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTGAATACAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	53782590	53755367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
tx.27220	chr7	-	11881	3	FSM	ENSMUSG00000101970.9	ENSMUST00000184655.4	602	3	-174	-11105	-165	1	multi-exon	FALSE	canonical	3	140	junction_2	39	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTCTCAGTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	73208308	73193788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_73205082_73205602_73205669_73207786
tx.27221	chr7	+	4159	2	ISM	ENSMUSG00000066406.17	ENSMUST00000207750.2	12597	38	293854	0	47391	0	3prime_fragment	FALSE	canonical	3	25	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCGTGATGTATTTG	NA	False	NA	NA	False	NA	NA	NA	75399135	75404357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_75399259_75400321
tx.27222	chr7	+	3381	3	FSM	ENSMUSG00000055652.15	ENSMUST00000092073.11	3385	3	9	-5	6	4	multi-exon	FALSE	canonical	3	14	junction_1	16	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTCTGATTCTGCC	NA	False	NA	NA	False	NA	NA	NA	75498094	75523883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_75498233_75515084_75516890_75522445
tx.27223	chr7	-	3581	18	FSM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	-653	-250	-34	223	multi-exon	FALSE	canonical	1	1	junction_2	15.7264681129603	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGGCCCGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	78228190	77841904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
tx.27224	chr7	+	6668	12	ISM	ENSMUSG00000030607.8	ENSMUST00000032835.7	7355	17	35914	3	-10354	-3	3prime_fragment	FALSE	canonical	2	2	junction_7	4.66745369199761	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTCTTTTCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	78739144	78764844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
tx.27225	chr7	-	3165	10	NNC	ENSMUSG00000039194.17	novel	2134	9	NA	NA	-1037	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	7.48001452431415	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTTCATGATGAACTTA	NA	False	NA	NA	False	NA	NA	NA	79037833	79024616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033793_79034406_79034528_79036436_79037545_79037641
tx.27226	chr7	-	3386	15	NNC	ENSMUSG00000050382.15	novel	4524	18	NA	NA	3806	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	14.1257111072581	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGCTTACATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	79360128	79347846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356634_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792
tx.27227	chr7	-	3848	22	NIC	ENSMUSG00000039062.16	novel	3797	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	4.91192265075338	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCAGACTTGTCACTCA	6831	False	NA	NA	False	NA	NA	NA	79497927	79471550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385_79492409_79492774_79492857_79497892
tx.27228	chr7	+	1979	2	FSM	ENSMUSG00000038797.14	ENSMUST00000155128.3	939	2	376	-1416	376	-23	multi-exon	FALSE	canonical	3	8	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTTGTGAGTTTTTGC	5240	False	NA	NA	False	NA	NA	NA	80513019	80526262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_80513420_80524683
tx.27229	chr7	-	719	3	FSM	ENSMUSG00000025723.13	ENSMUST00000026817.11	705	3	-13	-1	-13	0	multi-exon	FALSE	canonical	2	13	junction_1	1.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGGCCTCTCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	80554837	80551974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_80552252_80553881_80554055_80554568
tx.2723	chr11	-	2411	6	ISM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	-74	5862	-74	3275	5prime_fragment	FALSE	canonical	3	28	junction_3	3.37045990927054	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGAGGGTAGACTTCCC	NA	False	NA	NA	False	NA	NA	NA	53782560	53761229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
tx.27230	chr7	+	5081	10	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	20782	0	-16449	0	3prime_fragment	FALSE	canonical	0	0	junction_1	7.08676387515643	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGGTGTGATGATTAT	NA	False	NA	NA	False	NA	NA	NA	80728129	80755360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_80728582_80741894_80743933_80744654_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
tx.27231	chr7	-	2295	5	NNC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	1498	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	119.116277225239	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTGGTTGGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	81439213	81430431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439179
tx.27232	chr7	+	2408	6	NNC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	71.3649774048868	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTATCTTGAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	83281198	83291530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289666
tx.27233	chr7	+	3671	17	NIC	ENSMUSG00000030562.18	novel	3749	18	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	4.58555817213128	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTGTGGAATTTCTA	NA	False	NA	NA	False	NA	NA	NA	86895871	87047918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_86896111_86896695_86896792_86944995_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
tx.27234	chr7	+	7442	17	ISM	ENSMUSG00000048078.17	ENSMUST00000107162.8	11021	33	625986	707	591	-692	3prime_fragment	TRUE	canonical	2	12	junction_7	5.29740502510427	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTGTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	96446438	96557069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
tx.27235	chr7	-	4325	2	FSM	ENSMUSG00000086993.2	ENSMUST00000147690.2	3091	2	2	-1236	2	1236	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATGTTCTGATTAGGT	NA	False	NA	NA	False	NA	NA	NA	97345826	97341393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_97345675_97345782
tx.27236	chr7	+	2457	12	ISM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	60396	894	-110	-2	3prime_fragment	FALSE	canonical	1	1	junction_10	3.44496278572662	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTGTCTCTGAATT	NA	False	NA	NA	False	NA	NA	NA	99091016	99110190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
tx.27238	chr7	+	6625	9	FSM	ENSMUSG00000029461.18	ENSMUST00000049053.9	6609	9	-44	28	23	-28	multi-exon	FALSE	canonical	0	0	junction_2	16.4829457318769	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	100355864	100490835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100356101_100363321_100363362_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
tx.27239	chr7	+	6608	9	FSM	ENSMUSG00000029461.18	ENSMUST00000107042.9	6388	9	27	-247	-22	-28	multi-exon	FALSE	canonical	0	0	junction_3	17.2699160391705	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	100355868	100490835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100467942_100467970_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
tx.2724	chr11	-	3723	9	NNC	ENSMUSG00000063652.11	novel	3461	10	NA	NA	-55	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.04633819296811	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGACTACATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	53871213	53840781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_53842182_53842532_53842669_53843826_53844010_53845513_53845729_53846810_53846921_53848799_53848927_53850029_53850202_53850990_53851448_53870290
tx.27240	chr7	-	2409	10	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	-3	-323	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	13.2310894636482	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2195	False	NA	NA	False	NA	NA	NA	100512616	100495376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
tx.27241	chr7	+	3054	10	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	-7	-6	intron_retention	FALSE	canonical	1	6	junction_7	32.9975681857442	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTATGTGTTGCCGA	NA	False	NA	NA	False	NA	NA	NA	101714710	101732963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101729735_101729812_101730689_101730818_101731247
tx.27242	chr7	+	191	1	Intergenic	novelGene_360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	2	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCTCATATCACAACTA	NA	False	NA	NA	False	NA	NA	NA	101813823	101814014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_+_101813800_101814000
tx.27243	chr7	-	3629	6	NIC	ENSMUSG00000073968.5	novel	2388	7	NA	NA	26	2	intron_retention	FALSE	canonical	2	5	junction_5	1.32664991614216	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCACGAGTCTGCCTGTC	NA	False	NA	NA	False	NA	NA	NA	102336508	102326786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_102328045_102328242_102328344_102328880_102328904_102329343_102330966_102333254_102333719_102336347
tx.27244	chr7	-	2839	12	NIC	ENSMUSG00000036989.17	novel	3016	12	NA	NA	11	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	18.6830899810409	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTTTTGCTAGGTTC	NA	False	NA	NA	False	NA	NA	NA	105282756	105259860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268436_105268589_105268822_105274612_105274779_105282609
tx.27245	chr7	+	7245	9	Fusion	ENSMUSG00000057215.7_ENSMUSG00000062542.12_ENSMUSG00000073894.2	novel	2536	3	NA	NA	367	0	multi-exon	FALSE	canonical	0	0	junction_1	69.5539359058853	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGTTGTCTCATTAAAT	NA	False	NA	NA	False	NA	NA	NA	106809018	107147863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
tx.27246	chr7	-	2205	2	FSM	ENSMUSG00000048330.15	ENSMUST00000129629.2	469	2	-9	-1727	-3	1727	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108682521	108678223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_108680277_108682369
tx.27247	chr7	-	4546	8	ISM	ENSMUSG00000031027.16	ENSMUST00000121748.8	2295	13	104049	-10	104049	10	3prime_fragment	FALSE	canonical	3	45	junction_3	8.39582014566578	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGTGTCCTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	108933975	108878419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675
tx.27248	chr7	+	3431	4	NNC	ENSMUSG00000108379.2	novel	1808	4	NA	NA	4889	-1	intron_retention	FALSE	canonical	0	0	junction_2	1.24721912892465	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATGCATATAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	114555430	114583194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_114557363_114558685_114558751_114573227_114573369_114581901
tx.27249	chr7	-	836	6	NNC	ENSMUSG00000090862.4	novel	589	6	NA	NA	-359	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	4983.61280197409	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	115933789	115930744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933426
tx.2725	chr11	-	1185	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	190	junction_5	18.9245578254523	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTAGTGTCTGGCCTGA	NA	False	NA	NA	False	NA	NA	NA	53959843	53945753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
tx.27250	chr7	-	7898	33	NNC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	1	-25	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_31	17.7750428533239	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATACTACAATTAAAATAT	NA	False	NA	NA	False	NA	NA	NA	116042673	115936535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016786_116017817_116042538
tx.27251	chr7	+	2073	13	FSM	ENSMUSG00000030659.15	ENSMUST00000183175.8	1913	13	-24	-136	7	-5	multi-exon	FALSE	canonical	3	41	junction_2	11.5854314646552	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAACACACGTTTTT	NA	False	NA	NA	False	NA	NA	NA	116103625	116139814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179
tx.27252	chr7	-	2965	8	NIC	ENSMUSG00000058420.9	novel	2957	8	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	2.16653584115759	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTTATCTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	118047448	117979935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_117981276_118007247_118007404_118009146_118009268_118033055_118033676_118036045_118036195_118041570_118041720_118042341_118042360_118047036
tx.27253	chr7	-	6953	2	ISM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	28	5790	28	-3049	5prime_fragment	FALSE	canonical	3	81	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTTGTTTCAAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	118594406	118577059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_118583869_118594262
tx.27254	chr7	-	3554	10	FSM	ENSMUSG00000030929.18	ENSMUST00000063902.14	1241	10	-14	-2299	1	-960	multi-exon	FALSE	canonical	1	2	junction_1	31.084115271666	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAGTTGACTTTGTC	NA	False	NA	NA	False	NA	NA	NA	119393204	119368861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_119371568_119371767_119371843_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
tx.27255	chr7	-	5691	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	1	-369	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	53.0471488394994	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGATATTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	119494967	119452387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_119457280_119458602_119459139_119494293_119494370_119494780
tx.27256	chr7	-	3026	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.7959106252511	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTTATACTCTTGA	NA	False	NA	NA	False	NA	NA	NA	119494967	119455033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_119457280_119458602_119459139_119469637_119469768_119494853
tx.27257	chr7	+	960	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	-62	-23	-62	0	multi-exon	FALSE	canonical	3	29	junction_1	16.3095064303001	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTTTGTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	119495021	119515979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_119495114_119509026_119509186_119513395_119513489_119515363
tx.2726	chr11	+	2215	16	FSM	ENSMUSG00000018906.15	ENSMUST00000093107.12	2263	16	52	-4	1	4	multi-exon	FALSE	canonical	3	31	junction_12	14.6945190084225	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGCCTTATTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	53991801	54022482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
tx.27261	chr7	+	2649	20	NNC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	-234	-5	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	8.48136298041418	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGCTTCAGAGGTGCTG	NA	False	NA	NA	False	NA	NA	NA	122813768	122872471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_122813907_122814069_122814221_122828131_122828215_122832210_122832328_122834436_122834508_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
tx.27262	chr7	-	5267	8	NIC	ENSMUSG00000030757.14	novel	7831	7	NA	NA	-137	-385	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.98637909707342	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTACATGCAGCGTCAT	NA	False	NA	NA	False	NA	NA	NA	123099809	123077351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_123079996_123081863_123081908_123084162_123084655_123088801_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
tx.27263	chr7	-	3713	18	ISM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	44240	0	5452	0	3prime_fragment	FALSE	canonical	3	219	junction_12	22.0447798432894	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGTATTGGCCTAATG	NA	False	NA	NA	False	NA	NA	NA	125262712	125240125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579
tx.27264	chr7	+	2574	11	NIC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	1	7	intron_retention	FALSE	canonical	3	161	junction_4	16.1186227699515	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGCCTGCAAGCCCC	NA	False	NA	NA	False	NA	NA	NA	126028238	126045080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126044109_126044468
tx.27265	chr7	-	1813	16	ISM	ENSMUSG00000030720.17	ENSMUST00000116269.9	2487	17	715	685	1	1	3prime_fragment	FALSE	canonical	3	45	junction_15	32.0638252379358	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTGCAGTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	126182737	126171256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474
tx.27266	chr7	+	2878	3	ISM	ENSMUSG00000042759.13	ENSMUST00000039522.8	3685	4	1114	0	-1024	0	3prime_fragment	FALSE	canonical	3	6	junction_1	1.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGTAAGGACTGGAGG	NA	False	NA	NA	False	NA	NA	NA	126185227	126188284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_126186984_126187068_126187335_126187428
tx.27267	chr7	+	1627	4	FSM	ENSMUSG00000042675.16	ENSMUST00000106357.8	1594	4	-34	1	-8	0	multi-exon	FALSE	canonical	3	187	junction_1	13.6381816969859	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCTGGCTCACATGGAA	8233	False	NA	NA	False	NA	NA	NA	126376138	126379685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_126377126_126377225_126377270_126377477_126377587_126379198
tx.27269	chr7	-	5664	2	FSM	ENSMUSG00000059981.13	ENSMUST00000130371.2	669	2	-4166	-829	219	0	multi-exon	FALSE	canonical	3	63	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAGGATGTCTCCCTTT	4507	False	NA	NA	False	NA	NA	NA	126470594	126464849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126466088_126466168
tx.2727	chr11	+	2217	16	FSM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	18	-5	1	5	multi-exon	FALSE	canonical	3	35	junction_12	14.0816665680357	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTATTTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	53991806	54022483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
tx.27270	chr7	-	1913	5	FSM	ENSMUSG00000060538.15	ENSMUST00000120007.8	1087	5	-828	2	1	0	multi-exon	FALSE	canonical	3	60	junction_1	3.20156211871642	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGTAAGGTACTTAC	6243	False	NA	NA	False	NA	NA	NA	126497424	126485391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197
tx.27272	chr7	-	5495	3	FSM	ENSMUSG00000030823.7	ENSMUST00000049052.4	3878	3	-10	-1607	-10	1607	multi-exon	FALSE	canonical	2	4	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTACATTCACCCGTCT	NA	False	NA	NA	False	NA	NA	NA	126986348	126979824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_126984803_126985691_126985806_126985945
tx.27275	chr7	+	10534	33	NIC	ENSMUSG00000053877.13	novel	9633	31	NA	NA	-3	0	intron_retention	FALSE	canonical	2	5	junction_1	13.3941160122645	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGTAAGGAGGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	127111633	127160391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127111803_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306_127128397_127129354_127129532_127129611_127129971_127130065_127130244_127130506_127130644_127130891_127131062_127131198_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137941_127138120_127138409_127138928_127139094_127139827_127140095_127140413_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139
tx.27276	chr7	+	4060	2	NIC	ENSMUSG00000030815.12	novel	976	5	NA	NA	-130	0	intron_retention	FALSE	canonical	3	126	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGTGCCATGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	127178321	127182472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127181817_127181907
tx.27277	chr7	+	4013	10	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-274	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	35.1170880988616	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGGCCGCTGACTTTT	1259	False	NA	NA	False	NA	NA	NA	127345672	127368648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
tx.27278	chr7	+	3920	9	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	-8	-533	intron_retention	FALSE	canonical	3	550	junction_7	38.4740172064213	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGAAAGTACAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	127503266	127508860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127506520_127506613_127506704_127507092
tx.27279	chr7	+	5052	4	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	755	0	intron_retention	FALSE	canonical	3	88	junction_1	6.18241233033047	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	NA	False	NA	NA	NA	127837283	127844272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_127837762_127839053_127839162_127839254_127842645_127843196
tx.2728	chr11	+	2566	21	FSM	ENSMUSG00000020333.18	ENSMUST00000093106.12	5804	21	17	3221	17	0	multi-exon	FALSE	canonical	3	16	junction_10	11.8346947573649	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATATTGTACTTAATT	NA	False	NA	NA	False	NA	NA	NA	54194640	54252361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
tx.27280	chr7	-	2022	7	NIC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	3506	9	intron_retention	FALSE	canonical	3	141	junction_4	13.9164171634321	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCAGGCCTCTGGCCT	9101	False	NA	NA	False	NA	NA	NA	127884371	127870541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875738_127884284
tx.27281	chr7	-	4366	17	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	4.32290411644765	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGTGTCTTACCAAATG	NA	False	NA	NA	False	NA	NA	NA	129867979	129764180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129863478_129863797_129867523
tx.27282	chr7	-	4816	12	FSM	ENSMUSG00000030850.18	ENSMUST00000094017.5	1938	12	187	-3065	187	0	multi-exon	FALSE	canonical	3	22	junction_11	68.2405807383271	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	130121912	129993222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121606
tx.27283	chr7	+	1346	11	NIC	ENSMUSG00000053111.14	novel	515	5	NA	NA	-65	7	combination_of_known_junctions	FALSE	canonical	1	4	junction_8	2.00249843945008	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGGTCTCATCACTG	NA	False	NA	NA	False	NA	NA	NA	133391148	133482575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_133391287_133454894_133455073_133463831_133463957_133469846_133469929_133471006_133471082_133471750_133471817_133478476_133478643_133481607_133481752_133482000_133482079_133482172_133482218_133482326
tx.27284	chr7	+	4646	28	ISM	ENSMUSG00000058325.7	ENSMUST00000210617.2	3800	30	-26	31678	11	-31678	5prime_fragment	FALSE	canonical	3	101	junction_11	20.8696391472021	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGTATTGGTACAGAGA	NA	False	NA	NA	False	NA	NA	NA	134272393	134593978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250
tx.27287	chr7	+	620	5	FSM	ENSMUSG00000025467.9	ENSMUST00000026540.9	620	5	2	-2	2	2	multi-exon	FALSE	canonical	3	31	junction_4	1.08972473588517	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGCGTGTCTTTAAGAC	NA	False	NA	NA	False	NA	NA	NA	139673309	139677115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_139673382_139674944_139675012_139676062_139676116_139676586_139676694_139676794
tx.27288	chr7	-	2253	3	ISM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	9	4	-2	0	intron_retention	FALSE	canonical	3	437	junction_1	70.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTCTCTGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	140773909	140770842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_140771381_140772043_140772204_140772354
tx.27289	chr7	+	3016	12	NIC	ENSMUSG00000038637.16	novel	2197	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.59559756623477	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCCTGGCTGACCTA	419	False	NA	NA	False	NA	NA	NA	140774091	140789968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_140775130_140775820_140775892_140776894_140777083_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
tx.2729	chr11	+	2563	21	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	17	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	9.20584053739798	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGATATATTGTACTTA	NA	False	NA	NA	False	NA	NA	NA	54194640	54252358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
tx.27290	chr7	+	3759	8	NIC	ENSMUSG00000025509.16	novel	2048	10	NA	NA	0	-5	intron_retention	FALSE	canonical	3	56	junction_2	8.8109393972053	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGCCTTCCTCACTTC	9954	False	NA	NA	False	NA	NA	NA	141035119	141040000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_+_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
tx.27291	chr7	+	3940	21	NNC	ENSMUSG00000053046.17	novel	1986	19	NA	NA	-25368	2	intron_retention	FALSE	canonical	1	1	junction_20	2.71799558498538	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACGCAAGGTTTCCGTCC	1685	False	NA	NA	False	NA	NA	NA	141478119	141557986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_+_141478190_141479168_141479321_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539170_141539205_141539446_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656_141552752_141556211
tx.27292	chr7	-	4819	7	FSM	ENSMUSG00000037887.12	ENSMUST00000039926.10	4804	7	-20	5	-20	-5	multi-exon	TRUE	canonical	0	0	junction_2	1.10554159678513	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCCTCTGCTGACTC	6363	False	NA	NA	False	NA	NA	NA	141649029	141633231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_141636768_141637004_141637129_141637328_141637489_141638089_141638257_141642100_141642240_141643680_141644004_141648659
tx.27293	chr7	-	5047	2	NIC	ENSMUSG00000052281.15	novel	975	5	NA	NA	-138	-1	intron_retention	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTTGCTGTGACTCAAT	NA	False	NA	NA	False	NA	NA	NA	142561908	142542706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr7_-_142547345_142561499
tx.27294	chr7	+	1580	9	FSM	ENSMUSG00000000244.18	ENSMUST00000009396.13	1582	9	1	1	1	-1	multi-exon	FALSE	canonical	1	4	junction_1	3.07205143186113	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGTAGAATCCTTTCT	3170	False	NA	NA	False	NA	NA	NA	142558783	142573222	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_+_142558913_142559640_142559756_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142570937_142571022_142571315_142571411_142572427
tx.27295	chr7	-	1858	4	NNC	ENSMUSG00000037664.14	novel	1888	4	NA	NA	-11	0	intron_retention	FALSE	canonical	2	2	junction_3	5.43650214343336	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTAGTCTTCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	143014744	143012075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr7_-_143012759_143012848_143012988_143013531_143014413_143014589
tx.27296	chr7	-	1851	4	FSM	ENSMUSG00000037664.14	ENSMUST00000037287.8	1901	4	50	0	-4	0	multi-exon	FALSE	canonical	2	6	junction_2	4.02768199119819	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTTGTAGTCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	143014737	143012078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr7_-_143012759_143012848_143012988_143013531_143014416_143014589
tx.27297	chr7	-	4435	24	ISM	ENSMUSG00000031075.20	ENSMUST00000118556.9	4566	25	59709	2	28	-2	3prime_fragment	FALSE	canonical	0	0	junction_12	6.22756844166744	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGGTCTCTCCTGGCT	NA	False	NA	NA	False	NA	NA	NA	144232594	144142287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
tx.27298	chr7	-	2049	4	Intergenic	novelGene_367	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCTGAAGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	144375824	144361462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr7_-_144363017_144368346_144368447_144368528_144368600_144375500
tx.27299	chr7	-	4162	2	Antisense	novelGene_ENSMUSG00000050917.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATGTGAATGAATTTT	NA	False	NA	NA	False	NA	NA	NA	144415581	144410588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr7_-_144414363_144415193
tx.273	chr1	-	3049	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	5	0	2	0	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6057	False	NA	NA	False	NA	NA	NA	53336172	53228345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
tx.2730	chr11	+	2865	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108905.10	5807	21	-275	3217	-78	0	multi-exon	FALSE	canonical	3	10	junction_1	14.4874946074192	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATATTGTACTTAATT	NA	False	NA	NA	False	NA	NA	NA	54194752	54252361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
tx.27300	chr8	-	3023	5	NNC	ENSMUSG00000069633.13	novel	2870	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_4	11.1887220003001	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	3517647	3507108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517381
tx.27301	chr8	+	3776	3	FSM	ENSMUSG00000046589.8	ENSMUST00000053035.7	3878	3	102	0	102	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTTGTACAGTATGATT	NA	False	NA	NA	False	NA	NA	NA	4276928	4287470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_4277006_4281661_4281805_4283914
tx.27302	chr8	-	1822	2	Antisense	novelGene_ENSMUSG00000039842.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGTGTGTACTGAACA	NA	False	NA	NA	False	NA	NA	NA	18645498	18638398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_-_18639767_18645044
tx.27303	chr8	-	3163	7	FSM	ENSMUSG00000039814.16	ENSMUST00000055503.12	3176	7	12	1	12	-1	multi-exon	FALSE	canonical	1	1	junction_6	13.3998341614945	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTAGTGTTAGTATCT	NA	False	NA	NA	False	NA	NA	NA	19000977	18982745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000551
tx.27304	chr8	-	5447	6	NIC	ENSMUSG00000039814.16	novel	2838	7	NA	NA	9	-1	intron_retention	FALSE	canonical	2	24	junction_3	7.30479294709987	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTAGTGTTAGTATCT	NA	False	NA	NA	False	NA	NA	NA	19000980	18982745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
tx.27305	chr8	+	2944	3	ISM	ENSMUSG00000031480.16	ENSMUST00000162447.2	3273	4	15898	-2	15898	0	3prime_fragment	FALSE	canonical	2	2	junction_2	1	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTCTCAGTGATGACTGC	NA	False	NA	NA	False	NA	NA	NA	22733275	22750395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_22733973_22742168_22742328_22748307
tx.27306	chr8	+	3604	2	ISM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	13221	191	13184	-191	3prime_fragment	FALSE	canonical	3	780	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTCTCCTGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	22914597	22919490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_22917908_22919196
tx.27307	chr8	+	6185	3	ISM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	72564	7	18327	-7	3prime_fragment	FALSE	canonical	3	21	junction_2	1	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGATGTCTGTCTTGCC	NA	False	NA	NA	False	NA	NA	NA	23422128	23433268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_23422731_23425495_23425815_23428004
tx.27308	chr8	+	5421	2	ISM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	76099	1	21862	-1	3prime_fragment	FALSE	canonical	3	21	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTTGCCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	23425663	23433274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_23425815_23428004
tx.27309	chr8	-	4387	7	ISM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	42480	0	31450	0	3prime_fragment	FALSE	canonical	3	124	junction_6	13.6341075574784	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTGTGTTTTCCTG	6260	False	NA	NA	False	NA	NA	NA	25549912	25529159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849
tx.2731	chr11	+	6284	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	-28	-1	-28	1	multi-exon	TRUE	canonical	3	95	junction_9	15.4083965785252	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	1948	False	NA	NA	False	NA	NA	NA	54328996	54409062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
tx.27310	chr8	-	1976	11	NIC	ENSMUSG00000037363.10	novel	2126	11	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	3.68239052790439	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGTTCGAATGGCTT	2342	False	NA	NA	False	NA	NA	NA	26087536	26068507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_26068821_26069735_26069811_26070331_26070425_26071688_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084183_26086377_26086462_26087290
tx.27311	chr8	+	1598	7	NIC	ENSMUSG00000031570.18	novel	1483	7	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	26.0410999938345	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATACTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	26210053	26214911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_26210179_26210293_26210511_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
tx.27312	chr8	+	537	5	ISM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	12	3056	-12	45	5prime_fragment	FALSE	canonical	3	39	junction_2	16.7107749670684	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTCTTTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	26210075	26211858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688
tx.27313	chr8	-	2051	3	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	60.5	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	NA	False	NA	NA	NA	27718602	27715803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_27716469_27716753_27716822_27717284
tx.27314	chr8	-	1642	7	FSM	ENSMUSG00000062991.10	ENSMUST00000238826.2	1625	7	-46	29	-46	0	multi-exon	FALSE	canonical	0	0	junction_2	1.86338998124982	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCAGATGTTTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	32499615	32327224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_32327757_32339337_32339468_32437011_32437063_32439944_32439996_32448539_32448662_32458035_32458214_32499037
tx.27315	chr8	+	4349	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-689	4689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGATGTCTTGACTTC	NA	False	NA	NA	False	NA	NA	NA	33875663	33882105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_33876092_33876357_33877237_33879063
tx.27316	chr8	+	2698	2	ISM	ENSMUSG00000009628.15	ENSMUST00000009772.8	8405	4	9592	-2	9592	2	3prime_fragment	FALSE	canonical	3	20	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGCCTACATGTTTT	NA	False	NA	NA	False	NA	NA	NA	34070163	34075612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_34072775_34075525
tx.27317	chr8	+	3342	2	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTATGTGGAGAGGTTC	NA	False	NA	NA	False	NA	NA	NA	34132020	34135506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_+_34132200_34132343
tx.27318	chr8	+	505	4	FSM	ENSMUSG00000100605.2	ENSMUST00000188318.2	418	4	-82	-5	-82	5	multi-exon	FALSE	canonical	3	16	junction_3	5.71547606649408	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTCTTTCTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	34683930	34693304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_34684111_34688020_34688119_34691015_34691123_34693184
tx.27319	chr8	-	2678	13	ISM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	-4	30325	-4	-19030	5prime_fragment	FALSE	canonical	3	108	junction_5	17.2841851284796	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTCCCCTTCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	35432848	35323938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
tx.2732	chr11	+	4230	5	ISM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	64469	-1	38108	1	3prime_fragment	FALSE	canonical	3	116	junction_3	13.3674043852949	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	54393493	54409062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
tx.27320	chr8	-	5981	2	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	27297	12252	-9377	-7858	internal_fragment	FALSE	canonical	3	34	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37053800	37047156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_37050032_37050694
tx.27321	chr8	+	3287	15	FSM	ENSMUSG00000039478.16	ENSMUST00000068999.14	2219	15	575	-1643	575	-3	multi-exon	FALSE	canonical	1	2	junction_7	1.75691055374984	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGCCGAGTTATACT	8837	False	NA	NA	False	NA	NA	NA	40761073	40839346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_40761452_40788850_40789005_40793338_40793371_40801980_40802060_40805076_40805125_40807343_40807427_40809896_40809969_40812450_40812490_40819189_40819286_40828577_40828679_40829136_40829309_40831872_40831982_40833712_40833871_40835149_40835219_40837649
tx.27322	chr8	-	5364	14	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	-7	2823	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	76.8022897834194	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGGCATATTCAGATAT	NA	False	NA	NA	False	NA	NA	NA	41087847	41001312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_41004974_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
tx.27323	chr8	-	3846	2	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATATCAGTTA	NA	False	NA	NA	False	NA	NA	NA	43118081	43112207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_43115861_43117888
tx.27324	chr8	+	264	3	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	27.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCATCACCTTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	43806967	43811167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_+_43807091_43809132_43809201_43811094
tx.27325	chr8	-	3829	15	FSM	ENSMUSG00000038225.16	ENSMUST00000211400.2	3797	15	-17	-15	-5	15	multi-exon	FALSE	canonical	3	14	junction_1	36.5959739059155	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	NA	False	NA	NA	NA	47070252	47028613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
tx.27326	chr8	-	4540	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-4	-4	intron_retention	FALSE	non_canonical	0	0	junction_11	41.1255833936426	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTGGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	47070251	47029200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060939_47063474_47063661_47065404_47065482_47070168
tx.27327	chr8	-	4304	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	31	junction_7	35.2230984819148	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTGGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	47070251	47029200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
tx.27328	chr8	-	2111	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	-9	-269	-5	269	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGGTGATGACTAAC	NA	False	NA	NA	False	NA	NA	NA	47070252	47031628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
tx.27329	chr8	-	2821	13	ISM	ENSMUSG00000038225.16	ENSMUST00000136335.8	3943	14	-16	2435	-4	266	5prime_fragment	FALSE	canonical	3	92	junction_6	20.4659269681749	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	NA	False	NA	NA	NA	47070251	47031631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
tx.2733	chr11	+	8166	28	FSM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	23	0	-19	0	multi-exon	FALSE	canonical	3	58	junction_8	12.2166092610894	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	NA	False	NA	NA	NA	54413695	54590111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
tx.27330	chr8	+	2506	9	FSM	ENSMUSG00000031627.10	ENSMUST00000034041.9	2497	9	-12	3	-12	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.707106781186548	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGGTATCACTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	47192754	47300490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_47192972_47246527_47246621_47259505_47259606_47260256_47260434_47260739_47260787_47271825_47271944_47290708_47290874_47297855_47297903_47298948
tx.27331	chr8	-	465	2	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTATGGCATTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	47789581	47788337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_47788598_47789376
tx.27332	chr8	-	2100	2	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49296335	49288076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_49290094_49296252
tx.27333	chr8	-	816	2	ISM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	49786	0	2326	0	3prime_fragment	FALSE	canonical	3	42	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	54042314	54039901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_54040363_54041959
tx.27334	chr8	-	5099	14	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	41	-4	intron_retention	FALSE	canonical	1	64	junction_9	38.7583928685321	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	NA	False	NA	NA	NA	65302628	65192885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
tx.27335	chr8	-	5219	7	NNC	ENSMUSG00000025591.7	novel	4328	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	311.233924172086	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGTCTGATAACAAA	NA	False	NA	NA	False	NA	NA	NA	66939173	66925769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936085_66936709_66936823_66939063
tx.27336	chr8	+	2531	6	NIC	ENSMUSG00000031860.18	novel	1101	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	3	junction_2	13.001538370516	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2242	False	NA	NA	False	NA	NA	NA	70285309	70324942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_70285502_70311729_70311804_70317547_70319254_70322678_70322833_70323227_70323335_70324644
tx.27337	chr8	+	3474	6	NIC	ENSMUSG00000031860.18	novel	1560	8	NA	NA	3	874	intron_retention	FALSE	canonical	3	9	junction_2	10.870142593361	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCATTCTGCCTGCATG	2247	False	NA	NA	False	NA	NA	NA	70285314	70325816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_70285502_70311729_70311804_70317473_70319254_70322678_70322833_70323227_70323335_70324644
tx.27338	chr8	-	4610	5	NIC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	15	9	intron_retention	FALSE	canonical	3	75	junction_4	11.8822346383161	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTAATTTTAAAGCT	4700	False	NA	NA	False	NA	NA	NA	70687084	70672838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
tx.27339	chr8	-	5622	15	NIC	ENSMUSG00000003575.14	novel	5683	14	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	18.0759452289048	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCCTCTTCCTCTTTT	5164	False	NA	NA	False	NA	NA	NA	70892278	70835006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844562_70844669_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
tx.2734	chr11	+	1831	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	-2	0	-1	0	multi-exon	FALSE	canonical	3	58	junction_8	14.7082743152735	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGCTCATTATTGT	NA	False	NA	NA	False	NA	NA	NA	54413713	54525835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
tx.27340	chr8	-	1493	4	FSM	ENSMUSG00000003575.14	ENSMUST00000125613.8	870	4	-78	-545	-74	545	multi-exon	FALSE	canonical	3	61	junction_2	6.48074069840786	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCACACAGTGTGGGTG	5139	False	NA	NA	False	NA	NA	NA	70892303	70856953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_70857971_70858727_70858866_70861544_70861662_70892082
tx.27341	chr8	+	1669	9	FSM	ENSMUSG00000007888.16	ENSMUST00000008032.14	1644	9	-33	8	-33	-8	multi-exon	FALSE	canonical	0	0	junction_1	5.09901951359278	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGATGGCCAGTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	70945774	70956723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_70946051_70951246_70951529_70951742_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954_70956143_70956246_70956290_70956470
tx.27343	chr8	+	1150	4	FSM	ENSMUSG00000095026.3	ENSMUST00000179347.3	1149	4	-1	0	-1	0	multi-exon	FALSE	canonical	2	5	junction_1	14.4299072146089	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTAAAGTCTCACGATT	NA	False	NA	NA	False	NA	NA	NA	71171190	71175281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71171282_71173068_71173378_71174425_71174587_71174692
tx.27344	chr8	-	2224	2	ISM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	-10	0	-10	0	intron_retention	FALSE	canonical	3	708	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	71213602	71211294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71211671_71211754
tx.27345	chr8	+	3529	5	ISM	ENSMUSG00000000791.10	ENSMUST00000000808.8	2873	16	8400	-2114	3633	2114	3prime_fragment	FALSE	canonical	1	1	junction_3	3.08220700148449	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATCGGTGTTGTGCGGTG	NA	False	NA	NA	False	NA	NA	NA	71269492	71276182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_71269684_71269855_71269991_71271968_71272066_71272325_71272408_71273158
tx.27346	chr8	+	1263	3	ISM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	-41	532	0	202	intron_retention	FALSE	canonical	3	42	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAGCTACCTAAA	NA	False	NA	NA	False	NA	NA	NA	71823941	71825801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_71824630_71825111_71825278_71825392
tx.27347	chr8	+	920	3	FSM	ENSMUSG00000002396.9	ENSMUST00000110051.2	2179	3	33	1226	-8	201	multi-exon	FALSE	canonical	3	32	junction_1	15.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGTGCAGCTACCTAA	NA	False	NA	NA	False	NA	NA	NA	71823974	71825800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_71824630_71825392_71825447_71825589
tx.27348	chr8	-	1502	7	NNC	ENSMUSG00000034911.9	novel	2438	13	NA	NA	-964	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1.80277563773199	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGTCCTTTGTCCCTG	NA	False	NA	NA	False	NA	NA	NA	71843894	71838015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_71838438_71838559_71838683_71839993_71840222_71841399_71841650_71842664_71842830_71843284_71843430_71843725
tx.27349	chr8	-	1914	5	ISM	ENSMUSG00000034863.10	ENSMUST00000093450.6	3653	17	4960	-8	2735	8	3prime_fragment	FALSE	canonical	3	20	junction_1	8.87059749960509	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGAGCAGTGAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	71933647	71928654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079
tx.2735	chr11	+	7843	27	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	5	junction_26	19.1977023403304	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCTTCCTTCCCAA	NA	False	NA	NA	False	NA	NA	NA	54413716	54590112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54586905
tx.27350	chr8	-	932	4	NNC	ENSMUSG00000034845.7	novel	1987	6	NA	NA	4077	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	7.07106781186548	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTATTTGTTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	71960319	71950403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_71951050_71959480_71959563_71959663_71959722_71960173
tx.27351	chr8	+	4692	3	FSM	ENSMUSG00000056019.13	ENSMUST00000188374.7	717	3	-336	-3639	-274	789	multi-exon	FALSE	canonical	3	20	junction_2	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGGCTTTATCTTTGA	NA	False	NA	NA	False	NA	NA	NA	72635588	72645545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_72636053_72641107_72641235_72641444
tx.27352	chr8	-	5653	1	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAATAGGAACAGAAGA	5237	False	NA	NA	False	NA	NA	NA	72718684	72713031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_-_72713000_72718700
tx.27353	chr8	+	3797	2	FSM	ENSMUSG00000097000.3	ENSMUST00000181452.2	2994	2	-9	-794	-9	794	multi-exon	FALSE	canonical	3	10	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAACCAAGGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	73246768	73260137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_73246895_73256466
tx.27355	chr8	+	2117	13	NIC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	-24	-10	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	88.9817006780358	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCATGATCTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	75760308	75796739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_75760456_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
tx.27356	chr8	+	3679	3	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	7	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGATAGGTTGAGGGT	NA	False	NA	NA	False	NA	NA	NA	78792944	78803622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr8_+_78793056_78799076_78799137_78800114
tx.27357	chr8	+	1193	3	FSM	ENSMUSG00000037101.17	ENSMUST00000124713.2	673	3	32	-552	32	0	multi-exon	FALSE	canonical	2	2	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTTATTTTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	79117642	79120955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_79118107_79119699_79119767_79120293
tx.27358	chr8	+	5376	10	FSM	ENSMUSG00000071064.16	ENSMUST00000148713.8	5230	10	-155	9	-155	-9	multi-exon	FALSE	canonical	2	4	junction_8	2.75322482074753	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCTATACTCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	79844800	79920386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
tx.27359	chr8	-	1381	4	ISM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	482	77552	482	-77552	5prime_fragment	FALSE	canonical	2	10	junction_2	1.24721912892465	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATGAATAGCAGATGAT	4788	False	NA	NA	False	NA	NA	NA	80784153	80770033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_80770777_80771679_80771837_80778056_80778250_80783865
tx.2736	chr11	-	2911	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	245.457735669504	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	54678497	54608281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54678385
tx.27360	chr8	-	1869	2	Antisense	novelGene_ENSMUSG00000109893.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTCATGCCTTCAATAA	NA	False	NA	NA	False	NA	NA	NA	83481708	83474902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_-_83476566_83481502
tx.27361	chr8	+	3899	15	FSM	ENSMUSG00000002190.14	ENSMUST00000002259.13	3902	15	2	1	2	-1	multi-exon	FALSE	canonical	3	7	junction_1	9.63756468519016	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGTGTCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	84116497	84155180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84116607_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
tx.27362	chr8	+	8330	24	NNC	ENSMUSG00000013033.17	novel	5643	24	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	19.2305679791709	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATAGAGTGGTGTGAT	3070	False	NA	NA	False	NA	NA	NA	84626731	84668575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_84627554_84640067_84640223_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
tx.27363	chr8	-	2276	5	NNC	ENSMUSG00000074219.4	novel	2798	5	NA	NA	-6	-78	intron_retention	FALSE	canonical	1	3	junction_2	2.73861278752583	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCGAGATCAAGATGCAAA	6064	False	NA	NA	False	NA	NA	NA	84681840	84659653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_84661236_84661487_84661868_84662360_84662458_84662696_84662805_84681731
tx.27364	chr8	+	4503	9	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	10589	-1941	163	-2	3prime_fragment	FALSE	canonical	3	60	junction_5	7.22733526273688	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGGTGTGATCAATTG	956	False	NA	NA	False	NA	NA	NA	84661368	84668581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
tx.27365	chr8	+	3706	3	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	13536	-1935	32	-8	3prime_fragment	FALSE	canonical	3	74	junction_2	0.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATAGAGTGGTGTGAT	65	False	NA	NA	False	NA	NA	NA	84664315	84668575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_84664407_84664544_84664563_84664978
tx.27366	chr8	+	4240	7	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	24208	305	intron_retention	FALSE	canonical	3	41	junction_2	6.97614984548545	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTCGGGCCACCAGAG	NA	False	NA	NA	False	NA	NA	NA	84817672	84823926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
tx.27367	chr8	-	3512	12	ISM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	245	5	244	-5	3prime_fragment	FALSE	canonical	3	169	junction_7	21.829163902775	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGCCTGGTGTCCTGT	9507	False	NA	NA	False	NA	NA	NA	84831147	84823705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584
tx.27368	chr8	+	2386	8	FSM	ENSMUSG00000008129.15	ENSMUST00000093375.5	2167	8	-220	1	7	-1	multi-exon	TRUE	canonical	2	6	junction_4	5.92125193601792	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCTGATCTGTAGCTG	1890	False	NA	NA	False	NA	NA	NA	84874660	84899217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84893209_84894320_84896983_84897082_84898446_84898540_84898789
tx.27369	chr8	-	561	2	NNC	ENSMUSG00000056155.7	novel	730	2	NA	NA	1099	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCTTGGGACAAGGTG	NA	False	NA	NA	False	NA	NA	NA	84910747	84900361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_84900602_84910426
tx.2737	chr11	-	3072	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	549	junction_4	66.5263857428013	1064	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	54678504	54608281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
tx.27370	chr8	+	1090	2	FSM	ENSMUSG00000034656.19	ENSMUST00000130507.2	249	2	-28	-813	-28	1	multi-exon	FALSE	canonical	3	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACTTCTGAACTAGAGTG	NA	False	NA	NA	False	NA	NA	NA	85365591	85366876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_85365672_85365866
tx.27371	chr8	+	366	2	Antisense	novelGene_ENSMUSG00000001911.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAGCCCTACCCATGTT	NA	False	NA	NA	False	NA	NA	NA	85456802	85458328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_+_85456987_85458146
tx.27372	chr8	-	7338	7	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	132.85664789121	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGAGGGTGGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	87611895	87567765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87579209_87579786_87579918_87587053_87588739_87611449
tx.27373	chr8	-	1909	4	NNC	ENSMUSG00000031654.17	novel	1699	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.77123616632825	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAACGCTGACCCTGT	101	False	NA	NA	False	NA	NA	NA	88199236	88195494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_88197080_88198319_88198440_88198604_88198666_88199093
tx.27374	chr8	+	606	5	NIC	ENSMUSG00000097248.10	novel	498	4	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	79.1023861839831	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAGTGTGTCCATTCCTC	177	False	NA	NA	False	NA	NA	NA	88199418	88252180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_88199589_88240436_88240525_88248363_88248442_88250923_88251056_88252042
tx.27375	chr8	-	3347	5	ISM	ENSMUSG00000045333.16	ENSMUST00000165770.9	4334	6	21925	0	21309	0	3prime_fragment	FALSE	canonical	3	14	junction_3	3.93700393700591	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCTGGTTCTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	88509142	88388437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826
tx.27376	chr8	-	2919	3	FSM	ENSMUSG00000110212.2	ENSMUST00000211762.2	1425	3	-13	-1481	-13	1481	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTGTACAGGAGAATG	NA	False	NA	NA	False	NA	NA	NA	91489237	91484609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_91487378_91488284_91488358_91489159
tx.27377	chr8	+	3164	2	Antisense	novelGene_ENSMUSG00000089179.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGTAAATTTTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	91787379	91791164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_+_91787736_91788356
tx.27378	chr8	-	2363	3	ISM	ENSMUSG00000033282.15	ENSMUST00000139113.8	5046	26	-33	87013	7	2020	5prime_fragment	FALSE	canonical	3	21	junction_2	3	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAATGTAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	92039883	92032596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_92034815_92036965_92037058_92039830
tx.27379	chr8	+	2042	14	FSM	ENSMUSG00000033192.6	ENSMUST00000046290.3	2811	14	-5	774	-5	-318	multi-exon	TRUE	canonical	2	3	junction_10	2.47591952914324	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGTCAGCAATTAATCA	NA	False	NA	NA	False	NA	NA	NA	93581961	93645133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93641007_93644662
tx.2738	chr11	-	3092	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	317	22	-7	-22	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	54751421	54729206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
tx.27380	chr8	+	5490	12	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	5	-4	intron_retention	FALSE	canonical	3	129	junction_2	13.2963674900234	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTATGGTGGTAATT	NA	False	NA	NA	False	NA	NA	NA	94763895	94794545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784992_94789594_94789718_94790096_94790156_94790806
tx.27381	chr8	-	2379	9	NIC	ENSMUSG00000063605.6	novel	2304	9	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	4.99843725578305	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGCAGAGTTCTGAAAG	NA	False	NA	NA	False	NA	NA	NA	95644145	95629500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95643949
tx.27382	chr8	+	7527	2	FSM	ENSMUSG00000031669.11	ENSMUST00000212434.2	654	2	-46	-6827	-46	0	multi-exon	FALSE	canonical	3	101	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTTGTCACTAACTG	NA	False	NA	NA	False	NA	NA	NA	96360135	96371688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_96360412_96364437
tx.27383	chr8	+	2848	15	NIC	ENSMUSG00000036564.18	novel	3101	17	NA	NA	-5929	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	7.54476436926662	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGTCGTGTTTCCTAT	NA	False	NA	NA	False	NA	NA	NA	96423735	96441583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
tx.27384	chr8	-	4642	4	FSM	ENSMUSG00000035824.8	ENSMUST00000212165.2	775	4	-2357	-1510	-2357	-5	multi-exon	FALSE	canonical	3	63	junction_3	2.05480466765633	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCATGATGTAAATTCAT	NA	False	NA	NA	False	NA	NA	NA	104960623	104953334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791
tx.27385	chr8	+	6363	2	FSM	ENSMUSG00000054400.17	ENSMUST00000212433.2	1304	2	12	-5071	2	1	multi-exon	FALSE	canonical	3	282	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTGCAGATCTCC	4825	False	NA	NA	False	NA	NA	NA	104977525	104990077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_104977728_104983916
tx.27387	chr8	-	1358	4	ISM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	3927	284	-562	-284	3prime_fragment	FALSE	canonical	3	66	junction_1	4.96655480858378	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGGAGATGCTGAGGTC	4432	False	NA	NA	False	NA	NA	NA	105987314	105985201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153
tx.27388	chr8	-	3762	7	FSM	ENSMUSG00000014837.16	ENSMUST00000212922.2	3313	7	-450	1	4	0	multi-exon	FALSE	canonical	3	15	junction_6	9.72396809720988	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGGCTTCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	106016132	106007041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400
tx.27389	chr8	-	1636	10	ISM	ENSMUSG00000043251.7	ENSMUST00000212777.2	2161	13	2271	-3	-418	1	3prime_fragment	FALSE	canonical	3	15	junction_4	5.43877255578685	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAATCTATGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	106020301	106016554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883
tx.2739	chr11	-	3342	4	NIC	ENSMUSG00000020268.15	novel	2389	5	NA	NA	-2	3	intron_retention	FALSE	canonical	3	120	junction_3	26.1661358757205	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTGATTTCCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	54751416	54730635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_54732029_54739404_54741242_54744052_54744126_54751377
tx.27390	chr8	-	1511	8	ISM	ENSMUSG00000014778.11	ENSMUST00000014922.5	3928	22	16147	1	-240	-1	3prime_fragment	FALSE	canonical	2	3	junction_2	1.90595200916091	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGAGCCTTTCTCTTCTT	799	False	NA	NA	False	NA	NA	NA	106058438	106055795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_106056112_106056200_106056402_106056478_106056642_106056726_106056920_106057018_106057210_106057760_106057923_106058001_106058122_106058273
tx.27391	chr8	+	3965	21	NIC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	-7	-23	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	20.6815739246316	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGAAAAAAAAGC	2635	False	NA	NA	False	NA	NA	NA	106331879	106348828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_106331983_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
tx.27392	chr8	+	1276	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212352.2	1234	3	-38	-4	1	1	multi-exon	FALSE	canonical	2	20	junction_1	6.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	106427780	106430126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106427950_106428805_106429029_106429242
tx.27393	chr8	+	1259	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212430.2	1261	3	1	1	1	0	multi-exon	FALSE	canonical	3	15	junction_1	9	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGTGGTCCTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	106428281	106430124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_106428436_106428805_106429029_106429242
tx.27394	chr8	-	5981	15	NIC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	-14	2434	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	6.95613075653706	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATATCGTATGAGGT	NA	False	NA	NA	False	NA	NA	NA	106863620	106854516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860519_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
tx.27395	chr8	+	4287	3	ISM	ENSMUSG00000031907.10	ENSMUST00000212874.2	2195	5	1423	2	1423	-1	3prime_fragment	FALSE	canonical	2	16	junction_1	4.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACAGGCTTCTTGTAGA	NA	False	NA	NA	False	NA	NA	NA	107143453	107152359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_107145830_107146146_107146243_107150544
tx.27396	chr8	-	196	2	Antisense	novelGene_ENSMUSG00000041438.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATAATTGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	107653279	107551255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_-_107551402_107653229
tx.27397	chr8	-	6581	11	NIC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	109.200228937489	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGGTATTTTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	111754414	111729819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111754229
tx.27398	chr8	-	4855	2	ISM	ENSMUSG00000003316.15	ENSMUST00000168741.8	2145	15	17876	-4216	17876	1112	3prime_fragment	FALSE	canonical	3	485	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCGAATATTCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	111886532	111879940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_111884694_111886430
tx.27399	chr8	-	3740	27	FSM	ENSMUSG00000031959.16	ENSMUST00000034437.8	4896	27	-31	1187	-9	2	multi-exon	FALSE	canonical	2	3	junction_9	16.2917647181985	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTCTGTTTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	112248733	112176837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112199261_112199319_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
tx.274	chr1	-	3589	5	FSM	ENSMUSG00000026098.14	ENSMUST00000142922.2	3054	5	-39	-496	9	496	multi-exon	FALSE	canonical	3	9	junction_1	65.1267993993256	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGATTGGCTTAAGCA	6064	False	NA	NA	False	NA	NA	NA	53336165	53301557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_53304588_53306986_53307090_53314228_53314412_53321099_53321252_53336044
tx.2740	chr11	+	173	1	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAACCCAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	54742203	54742376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_54742200_54742400
tx.27400	chr8	+	1275	5	FSM	ENSMUSG00000031844.9	ENSMUST00000034304.9	1320	5	45	0	45	0	multi-exon	FALSE	canonical	1	1	junction_3	2.69258240356725	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTTATTTTGAAATGT	NA	False	NA	NA	False	NA	NA	NA	118428687	118485766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_+_118429003_118461232_118461446_118469070_118469257_118479924_118480063_118485343
tx.27401	chr8	+	1481	5	NNC	ENSMUSG00000031828.10	novel	2181	5	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	7.49583217528247	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTATCTTGTTTGAATA	NA	False	NA	NA	False	NA	NA	NA	120588996	120603728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_+_120589187_120591741_120591819_120596360_120596724_120601113_120601272_120603035
tx.27402	chr8	+	5809	12	ISM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	29505	-2050	4311	-14	3prime_fragment	FALSE	canonical	3	77	junction_2	18.2371884160447	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAAGACGAAATTCATC	NA	False	NA	NA	False	NA	NA	NA	121293672	121308115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
tx.27403	chr8	-	2295	8	NIC	ENSMUSG00000031816.16	novel	1520	9	NA	NA	-2	-5	intron_retention	FALSE	canonical	2	11	junction_5	27.5473618130147	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTGCTTGTATGT	NA	False	NA	NA	False	NA	NA	NA	121835068	121824300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
tx.27404	chr8	-	4483	1	Genic_Genomic	ENSMUSG00000031809.11	novel	NA	NA	NA	NA	-2240	-10264	mono-exon	FALSE	NA	NA	NA	NA	NA	2	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACCTGCGAGTAGCCA	NA	False	NA	NA	False	NA	NA	NA	122273299	122268816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr8_-_122268800_122273300
tx.27406	chr8	-	1314	6	ISM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	24540	-1	291	1	3prime_fragment	FALSE	canonical	3	124	junction_5	31.4515500412937	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAGATGACAATGTGCT	NA	False	NA	NA	False	NA	NA	NA	122531768	122523050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685
tx.27407	chr8	-	1653	5	NNC	ENSMUSG00000025317.8	novel	1249	7	NA	NA	3501	726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.3660704160321	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGTTTTGTCTGGCTC	NA	False	NA	NA	False	NA	NA	NA	122650712	122642138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr8_-_122643247_122644726_122644883_122647821_122647941_122650293_122650357_122650505
tx.27408	chr8	-	8190	51	FSM	ENSMUSG00000014444.18	ENSMUST00000067252.14	8216	51	5	21	5	2	multi-exon	FALSE	canonical	3	19	junction_46	26.2908729410037	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	6116	False	NA	NA	False	NA	NA	NA	123278063	123208457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229048_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
tx.27409	chr8	-	1220	2	ISM	ENSMUSG00000006362.17	ENSMUST00000064674.13	2867	12	18	19615	18	475	5prime_fragment	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTCTGAGATGAGAAAC	NA	False	NA	NA	False	NA	NA	NA	123404896	123376291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_123377216_123404600
tx.2741	chr11	+	609	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	22	5	22	-5	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	865	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGGATTTGTTACTC	NA	False	NA	NA	False	NA	NA	NA	54757230	54761322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_54757427_54760673_54760779_54761014
tx.27410	chr8	+	1809	9	ISM	ENSMUSG00000034796.15	ENSMUST00000037900.9	2398	15	9052	-2	-87	2	3prime_fragment	FALSE	canonical	1	2	junction_1	7.1894019222742	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCCTTTCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	123853168	123861923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_+_123853474_123854091_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
tx.27412	chr8	+	4122	10	NIC	ENSMUSG00000001065.16	novel	4071	11	NA	NA	8	-7	intron_retention	FALSE	canonical	3	13	junction_5	4.66137265853401	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTGCTGCCCAGAGTT	1642	False	NA	NA	False	NA	NA	NA	123980941	123996475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994439_123994508
tx.27414	chr8	+	233	2	Antisense	novelGene_ENSMUSG00000031974.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGGAGGTTGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	124700684	124710291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_+_124700895_124710268
tx.27415	chr8	+	2027	2	Antisense	novelGene_ENSMUSG00000031974.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTTTTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	124705538	124708900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr8_+_124705815_124707149
tx.27417	chr8	-	5182	6	ISM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	9014	13	8992	-13	intron_retention	FALSE	canonical	3	163	junction_2	9.43610088966836	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTTCTAAAGATGCTT	NA	False	NA	NA	False	NA	NA	NA	127688807	127673934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291
tx.27418	chr9	-	5144	2	Antisense	novelGene_ENSMUSG00000025898.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGTCTTGTTGACAT	NA	False	NA	NA	False	NA	NA	NA	3416796	3411580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_-_3416226_3416297
tx.27419	chr9	+	728	5	NNC	ENSMUSG00000025893.9	novel	2313	4	NA	NA	65	-1638	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.1078306780183	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGCATTTGTTATCTC	-6	True	NA	NA	False	NA	NA	NA	4309899	4330073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_4309935_4312141_4312260_4313701_4313807_4316826_4317072_4329848
tx.2742	chr11	+	1480	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	114	0	-40	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	NA	False	NA	NA	NA	54793711	54801203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
tx.27420	chr9	+	703	4	NNC	ENSMUSG00000025893.9	novel	2231	3	NA	NA	102	-1640	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	24.3447461820136	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTGCATTTGTTATC	31	False	NA	NA	False	NA	NA	NA	4309936	4330071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_4310067_4313701_4313807_4316826_4317072_4329848
tx.27421	chr9	-	5184	8	NIC	ENSMUSG00000032000.18	novel	2667	9	NA	NA	0	2896	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	8.16663195883226	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAGTGAAACTGAAGTAC	-1	True	NA	NA	False	NA	NA	NA	7872898	7845803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_7849458_7849672_7849715_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
tx.27423	chr9	-	1853	7	FSM	ENSMUSG00000053070.6	ENSMUST00000065291.2	1592	7	-54	-207	-54	207	multi-exon	FALSE	canonical	2	5	junction_1	2.38047614284762	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAATTCTTATTATATA	-45	True	NA	NA	False	NA	NA	NA	8042878	8021465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_8022546_8023900_8023968_8025962_8026136_8027101_8027269_8037460_8037537_8042409_8042492_8042670
tx.27425	chr9	+	4423	4	FSM	ENSMUSG00000079084.13	ENSMUST00000215735.2	2723	4	-28	-1672	-1	1672	multi-exon	FALSE	canonical	2	2	junction_1	15.2825245151302	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCAGCCTCAGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	13246608	13256393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_13246677_13248883_13248968_13251695_13252424_13252850
tx.27426	chr9	-	6055	19	FSM	ENSMUSG00000043943.15	ENSMUST00000166825.8	2799	19	-20	-3236	-20	2167	multi-exon	FALSE	canonical	0	0	junction_2	1.64147630029935	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	2038	False	NA	NA	False	NA	NA	NA	18297352	18231079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_18234920_18237471_18237565_18238659_18238742_18241930_18242196_18246223_18246315_18250686_18250779_18258749_18258818_18260145_18260210_18262145_18262229_18262331_18262452_18262705_18262792_18274437_18274537_18275416_18275511_18287718_18287906_18289903_18290030_18291207_18291310_18292090_18292278_18296340_18296453_18297088
tx.27427	chr9	+	2347	2	NNC	ENSMUSG00000074502.5	novel	2639	3	NA	NA	2000	-195	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATATCAAAAGAT	4851	False	NA	NA	False	NA	NA	NA	18317715	18322603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_18317849_18320389
tx.27428	chr9	-	6774	9	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-49	2062	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	21.8342477543881	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGAGTCTTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	20371172	20344263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355682_20356189_20356282_20357041_20357194_20370842
tx.27429	chr9	-	3203	5	NIC	ENSMUSG00000003308.16	novel	3172	6	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	31.9090504402748	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGGCTCTGAATTAA	NA	False	NA	NA	False	NA	NA	NA	21150130	21141028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_21142165_21142545_21143199_21144683_21145370_21148366_21149053_21150088
tx.2743	chr11	-	2812	18	FSM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	20	2	2	0	multi-exon	FALSE	canonical	3	102	junction_1	53.1161161918674	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3602	False	NA	NA	False	NA	NA	NA	54846928	54801612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
tx.27430	chr9	-	7802	21	NIC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	2	-1826	intron_retention	FALSE	canonical	3	152	junction_7	20.1782060649603	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAATCTCTAATCCATG	6258	False	NA	NA	False	NA	NA	NA	21763929	21737367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
tx.27435	chr9	+	1364	2	ISM	ENSMUSG00000096981.3	ENSMUST00000180419.2	1415	3	5140	-4	5140	4	3prime_fragment	FALSE	canonical	1	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATCTATGTGAAATGG	NA	False	NA	NA	False	NA	NA	NA	21987467	21997422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_21987648_21996238
tx.27436	chr9	-	4325	8	NIC	ENSMUSG00000066829.8	novel	3238	8	NA	NA	-38	15	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	13.6800167084276	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTCTTTGGGCATTTA	NA	False	NA	NA	False	NA	NA	NA	22218982	22188028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22217820
tx.27437	chr9	-	1228	4	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0.816496580927726	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGATGTCGGATGCAT	2292	False	NA	NA	False	NA	NA	NA	34946540	34915701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_-_34916338_34916907_34916944_34945368_34945549_34946164
tx.27438	chr9	+	247	1	Intergenic	novelGene_371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCCTGGGTAGAATCC	NA	False	NA	NA	False	NA	NA	NA	35012661	35012908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_+_35012700_35012900
tx.27439	chr9	-	1351	7	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	80.9334431630227	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGGCTCTACTTTG	6399	False	NA	NA	False	NA	NA	NA	35179066	35128530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138522_35146526_35146780_35179018
tx.2744	chr11	-	2638	17	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	64.3996312101242	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	3602	False	NA	NA	False	NA	NA	NA	54846928	54801614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
tx.27440	chr9	+	6603	20	FSM	ENSMUSG00000038119.16	ENSMUST00000119129.10	7503	20	-143	1043	-139	-1042	multi-exon	TRUE	canonical	1	3	junction_6	3.6977195937369	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTTTGAGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	35332710	35417905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
tx.27441	chr9	-	7304	16	FSM	ENSMUSG00000034303.9	ENSMUST00000239439.2	3525	16	22	-3801	11	3801	multi-exon	FALSE	canonical	2	5	junction_9	5.33166640616859	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATACTTTGTATTGACTT	NA	False	NA	NA	False	NA	NA	NA	37259666	37183329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_37187862_37188653_37188778_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259329
tx.27442	chr9	+	1845	7	FSM	ENSMUSG00000001946.15	ENSMUST00000002011.14	1865	7	20	0	20	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTGAATCACTTTTTTT	5202	False	NA	NA	False	NA	NA	NA	37439393	37449615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_37439587_37442783_37442972_37445448_37445651_37445833_37445990_37447893_37448017_37448301_37448429_37448759
tx.27443	chr9	+	3591	7	NIC	ENSMUSG00000049281.17	novel	4150	7	NA	NA	10	129	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	1.06718737290547	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCTAAACGTGCTAGAT	NA	False	NA	NA	False	NA	NA	NA	40180522	40203043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_40180899_40181263_40181344_40188363_40188528_40190670_40190897_40193719_40193859_40199669_40199750_40200517
tx.27444	chr9	-	5060	11	ISM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	136759	305	-1704	-305	3prime_fragment	FALSE	canonical	3	412	junction_6	101.391567696727	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGCACTGTGTACTTG	6794	False	NA	NA	False	NA	NA	NA	41898834	41876320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761
tx.27445	chr9	-	5148	5	NIC	ENSMUSG00000032018.15	novel	4787	6	NA	NA	-49	3	intron_retention	FALSE	canonical	3	174	junction_4	25.1632172028936	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGTGGACCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	42175601	42162887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
tx.27446	chr9	-	4887	8	NNC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.1273739602868	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTGTTCTGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	42383545	42323611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42363012_42363059_42383361
tx.27447	chr9	+	1693	4	FSM	ENSMUSG00000032011.6	ENSMUST00000114840.2	1735	4	42	0	42	0	multi-exon	FALSE	canonical	3	7	junction_3	3.74165738677394	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGTCTGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	43954722	43959876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_43954774_43957253_43957316_43957910_43958250_43958635
tx.27448	chr9	-	2775	17	NIC	ENSMUSG00000034342.10	novel	11372	16	NA	NA	1	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	3.99804639792987	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTCTGGTTCACTTG	2975	False	NA	NA	False	NA	NA	NA	44145285	44054272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_44054352_44062887_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
tx.27449	chr9	-	10794	10	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	12	2390	intron_retention	FALSE	canonical	1	1	junction_6	20.7952986139763	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAAATGTTATGTCTT	NA	False	NA	NA	False	NA	NA	NA	44216956	44201346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44209868_44209924_44210169_44210323_44210509_44210622_44210859_44211090_44213706
tx.2745	chr11	-	2738	18	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_17	40.9030417393305	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3602	False	NA	NA	False	NA	NA	NA	54846928	54801612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
tx.27450	chr9	-	5498	10	FSM	ENSMUSG00000111291.2_ENSMUSG00000032119.6	ENSMUST00000034629.6	1439	10	-3	-4056	-3	2	multi-exon	FALSE	canonical	0	0	junction_9	17.1399468429099	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTGTGGTGGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	44216946	44203734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44214070_44216912
tx.27451	chr9	+	3203	8	FSM	ENSMUSG00000032114.10	ENSMUST00000165839.3	2086	8	-1117	0	-36	0	multi-exon	FALSE	canonical	3	14	junction_1	6.22044030202207	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGGCTCATCCTTT	NA	False	NA	NA	False	NA	NA	NA	44308355	44314263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
tx.27452	chr9	-	2888	5	NNC	ENSMUSG00000074397.6	novel	1968	5	NA	NA	-118	458	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	15.8646619882051	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGTGTGTGTGTGAG	9096	False	NA	NA	False	NA	NA	NA	44352551	44344611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_44346607_44346719_44346879_44347238_44347400_44347500_44347576_44352053
tx.27453	chr9	+	2843	14	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-58	-3223	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	7.66070431047592	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATATATATATTATTTT	NA	False	NA	NA	False	NA	NA	NA	44516130	44548805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_44516225_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
tx.27454	chr9	+	2910	15	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-42	-3230	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	11.2161054028644	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACATACATATATATATA	NA	False	NA	NA	False	NA	NA	NA	44516146	44548798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_44516225_44518244_44518335_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
tx.27455	chr9	-	16507	36	NNC	ENSMUSG00000002028.14	novel	16461	36	NA	NA	-54	-8	intron_retention	FALSE	canonical	2	2	junction_21	5.53681555865935	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCACTCTGCTGAGCT	9162	False	NA	NA	False	NA	NA	NA	44792648	44714659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722202_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579_44733817_44733983_44734167_44734524_44734686_44735621_44735701_44735817_44735936_44736686_44736846_44738118_44738257_44740080_44740188_44740374_44740569_44741346_44741421_44741691_44741803_44742520_44742695_44744157_44744343_44745203_44745318_44747098_44747220_44747440_44747537_44747847_44747995_44752267_44752382_44752859_44752992_44753606_44753681_44753829_44754214_44754654_44754720_44756685_44756921_44758149_44758328_44758700_44761352_44764234_44764305_44792146
tx.27456	chr9	+	1790	3	NNC	ENSMUSG00000037129.8	novel	3245	13	NA	NA	25991	3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGGGTGCTTCATTGA	10003	False	NA	NA	False	NA	NA	NA	45256388	45258882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_45256433_45256523_45256677_45257289
tx.27457	chr9	+	1672	2	ISM	ENSMUSG00000037129.8	ENSMUST00000034597.8	3245	13	26197	0	26197	0	3prime_fragment	FALSE	canonical	3	10	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTGGGTGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	45256594	45258879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_45256677_45257289
tx.27458	chr9	-	4538	13	ISM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	1955	-1097	1451	1013	3prime_fragment	FALSE	canonical	3	36	junction_2	9.16628787096136	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGTTGTCAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	45816220	45773709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103
tx.27459	chr9	-	3187	4	NIC	ENSMUSG00000032067.7	novel	1046	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	122	junction_3	8.99382504215469	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7907	False	NA	NA	False	NA	NA	NA	50440003	50432916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_50433637_50433828_50433900_50436022_50436585_50438169
tx.2746	chr11	-	2566	17	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	54.30350903717	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3602	False	NA	NA	False	NA	NA	NA	54846928	54801612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
tx.27460	chr9	-	3024	9	NIC	ENSMUSG00000032066.10	novel	2118	12	NA	NA	8924	6	intron_retention	TRUE	canonical	0	0	junction_4	1.53602571593056	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTATATTTTTAATACC	NA	False	NA	NA	False	NA	NA	NA	50457557	50444380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_50444820_50445909_50446021_50446777_50446961_50447530_50447669_50450145_50451558_50452342_50452472_50455756_50455860_50456646_50456763_50457164
tx.27461	chr9	-	6691	16	FSM	ENSMUSG00000037112.17	ENSMUST00000041375.11	3552	16	18	-3157	18	3157	multi-exon	FALSE	canonical	2	11	junction_1	12.14907403879	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	NA	False	NA	NA	NA	50920355	50800943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_50804690_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
tx.27462	chr9	+	7173	15	FSM	ENSMUSG00000053199.14	ENSMUST00000065496.12	7161	15	-15	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_3	2.39578711874977	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGCTTCAGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	51676636	51765153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_51676912_51697035_51697119_51727976_51728142_51732462_51732613_51736192_51736235_51737138_51737224_51738135_51738214_51740629_51740697_51742938_51743128_51750097_51750277_51751693_51751856_51754965_51755076_51757424_51757615_51758606_51758719_51759867
tx.27463	chr9	+	9298	4	NIC	ENSMUSG00000034584.4	novel	2315	3	NA	NA	77	3636	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	2.05480466765633	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATGCACTGCATCCT	NA	False	NA	NA	False	NA	NA	NA	53252565	53292450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_53252771_53264453_53264503_53278376_53278513_53283542
tx.27464	chr9	-	6578	25	ISM	ENSMUSG00000034218.17	ENSMUST00000118282.9	9819	62	61917	-2027	-18432	2027	3prime_fragment	FALSE	canonical	0	0	junction_13	13.1718739702781	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCGTATGTCCATTTTA	NA	False	NA	NA	False	NA	NA	NA	53383349	53348421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651
tx.27465	chr9	-	4531	2	Intergenic	novelGene_375	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGAACTTAGAATCTC	NA	False	NA	NA	False	NA	NA	NA	54763422	54750064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_-_54754430_54763256
tx.27466	chr9	+	1431	3	ISM	ENSMUSG00000032313.12	ENSMUST00000034862.5	2408	11	103386	1	97134	-1	3prime_fragment	FALSE	canonical	2	4	junction_1	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGCTAGTAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	55337618	55345628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_55337749_55342474_55342538_55344390
tx.27467	chr9	-	4338	3	ISM	ENSMUSG00000034007.11	ENSMUST00000037408.9	5158	31	359851	373	232556	-373	3prime_fragment	FALSE	canonical	3	73	junction_1	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGGGAGTATCAAGT	3263	False	NA	NA	False	NA	NA	NA	55467038	55457539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_55458156_55460754_55460807_55463368
tx.27468	chr9	-	6708	2	ISM	ENSMUSG00000074305.10	ENSMUST00000188142.7	7524	4	16737	5	16737	-5	3prime_fragment	FALSE	canonical	3	49	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAGACTTGAAGTGC	4772	False	NA	NA	False	NA	NA	NA	56134612	56108414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_56114896_56134385
tx.27469	chr9	-	10989	6	NIC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-60	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	16.1542564050469	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACCAGACTTGAAGTG	NA	False	NA	NA	False	NA	NA	NA	56325411	56108415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56325224
tx.2747	chr11	-	2469	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	-1	3	-1	-3	multi-exon	FALSE	canonical	3	220	junction_5	83.6892399827414	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGATGTGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	54924272	54869936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
tx.27470	chr9	+	4573	4	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	32	8735	32	-8735	intron_retention	FALSE	canonical	3	166	junction_1	18.1536650722535	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGAGTGGTAGCAGGTG	NA	False	NA	NA	False	NA	NA	NA	56858193	56881755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537
tx.27471	chr9	-	3146	2	ISM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	16	0	1	0	intron_retention	FALSE	canonical	3	1106	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6293	False	NA	NA	False	NA	NA	NA	57065599	57062322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_57062565_57062695
tx.27473	chr9	-	200	1	Intergenic	novelGene_376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGAACGGAGACAGGG	NA	False	NA	NA	False	NA	NA	NA	58741764	58741564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_-_58741600_58741800
tx.27474	chr9	+	2796	12	FSM	ENSMUSG00000032297.12	ENSMUST00000034840.10	2765	12	-30	-1	-30	1	multi-exon	TRUE	canonical	0	0	junction_4	0.953462589245592	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCCTGCTTCTGTGAG	NA	False	NA	NA	False	NA	NA	NA	59485589	59514576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_59485923_59489558_59489642_59497917_59497967_59509859_59509989_59510082_59510163_59510277_59510422_59510517_59510651_59510730_59510881_59511412_59511494_59511582_59511727_59512239_59512396_59513262
tx.27475	chr9	+	2573	12	NIC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	1	-1117	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.71251452435445	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTCTGTTGTTTGTA	1637	False	NA	NA	False	NA	NA	NA	59587427	59625040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490
tx.27476	chr9	-	2010	8	FSM	ENSMUSG00000032292.9	ENSMUST00000034831.3	2037	8	-27	54	-27	-54	multi-exon	TRUE	canonical	1	3	junction_6	3.8438925848782	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTTGCTGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	59857427	59850107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_59850803_59854244_59854351_59854595_59854837_59855645_59855804_59855885_59856108_59856207_59856312_59856464_59856592_59857070
tx.27477	chr9	+	3655	13	NNC	ENSMUSG00000032280.17	novel	4065	19	NA	NA	38	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.1695971208115	10	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTGATTGTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	61309178	61325770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
tx.27478	chr9	+	183	2	Intergenic	novelGene_377	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATATACTATAGCCAG	NA	False	NA	NA	False	NA	NA	NA	62211775	62225001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_+_62211926_62224968
tx.27479	chr9	+	2044	5	Intergenic	novelGene_378	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	2.87228132326901	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTCTCTGCTCTCAT	NA	False	NA	NA	False	NA	NA	NA	62556987	62562880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_+_62557364_62557826_62557945_62560928_62560991_62561149_62561501_62561743
tx.2748	chr11	-	2485	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	1	3	1	-3	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	532	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGATGTGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	54924270	54869936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
tx.27480	chr9	+	1592	4	Intergenic	novelGene_379	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	3.09120616516523	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTCTGCTCTCATAAT	NA	False	NA	NA	False	NA	NA	NA	62557008	62562883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr9_+_62557281_62557826_62557945_62560928_62560991_62561743
tx.27481	chr9	+	4718	2	ISM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	10583	69	10553	-62	intron_retention	FALSE	canonical	3	41	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAAGCCTTTGGACCTCA	3034	False	NA	NA	False	NA	NA	NA	62775968	62783134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_62776100_62778547
tx.27482	chr9	-	2000	19	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	194	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	21.2446071588376	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	63284965	63071050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
tx.27483	chr9	+	3292	23	NIC	ENSMUSG00000036466.18	novel	6680	25	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	7.46686897108855	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTCTCACATAACTTA	NA	False	NA	NA	False	NA	NA	NA	64292915	64613216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64607378_64607436_64613008
tx.27484	chr9	-	3149	7	ISM	ENSMUSG00000034452.8	ENSMUST00000037798.8	5213	10	15534	9	15534	-9	3prime_fragment	TRUE	canonical	2	2	junction_6	2.21735578260835	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCCACTGGCATTT	NA	False	NA	NA	False	NA	NA	NA	64843355	64830151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_64831953_64833450_64833618_64834444_64834535_64835239_64835996_64838461_64838554_64839448_64839533_64843196
tx.27485	chr9	-	3152	8	NNC	ENSMUSG00000034452.8	novel	5213	10	NA	NA	14950	-13	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	2.2314999074019	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTGGGTCCACTGGC	NA	False	NA	NA	False	NA	NA	NA	64843939	64830155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_64831953_64833450_64833618_64834444_64834535_64835239_64835996_64838461_64838554_64839448_64839533_64843196_64843306_64843882
tx.27486	chr9	-	5244	6	ISM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	124192	0	-2228	0	3prime_fragment	FALSE	canonical	2	5	junction_1	2.48193472919817	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGGGCTGCTGGTTA	NA	False	NA	NA	False	NA	NA	NA	65610654	65599672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_65602977_65603424_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553
tx.27487	chr9	+	7207	14	FSM	ENSMUSG00000032384.17	ENSMUST00000034949.10	7208	14	0	1	0	-1	multi-exon	FALSE	canonical	3	5	junction_1	6.58040843321514	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTTTCATTAGCT	NA	False	NA	NA	False	NA	NA	NA	65816267	65952296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_65816451_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
tx.27488	chr9	+	8441	2	ISM	ENSMUSG00000032384.17	ENSMUST00000034949.10	7208	14	120351	7	-6681	-1	3prime_fragment	FALSE	canonical	3	21	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTACTTCCTTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	65936618	65952290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_65939628_65946858
tx.27489	chr9	+	9444	37	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-2	-1584	intron_retention	FALSE	canonical	2	7	junction_16	3.07769755210323	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCCTAGTGATACTCC	NA	False	NA	NA	False	NA	NA	NA	66257729	66357997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349187_66349362_66352734_66352975_66353366_66353451_66355293
tx.2749	chr11	+	2047	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	-51	2131	-51	-2131	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	419	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	54988889	55001724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
tx.27490	chr9	-	3765	13	NIC	ENSMUSG00000032376.13	novel	1901	14	NA	NA	-50	4	combination_of_known_junctions	FALSE	canonical	3	5	junction_12	38.6079834864357	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTGAGTGTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	66500368	66423511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66500065
tx.27492	chr9	-	6962	20	ISM	ENSMUSG00000052698.16	ENSMUST00000215267.2	4999	33	33727	-3815	2506	-9	3prime_fragment	FALSE	canonical	3	61	junction_19	12.5207860417185	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGAACTTGTGTGA	7139	False	NA	NA	False	NA	NA	NA	67201219	67124377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086
tx.27493	chr9	-	8568	31	ISM	ENSMUSG00000052698.16	ENSMUST00000215267.2	4999	33	4480	-3815	4480	-9	3prime_fragment	FALSE	canonical	3	55	junction_28	13.6208989750636	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGAACTTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	67230466	67124377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254
tx.27495	chr9	-	2216	6	ISM	ENSMUSG00000032217.14	ENSMUST00000213208.2	3293	9	11575	0	11463	0	3prime_fragment	FALSE	canonical	3	217	junction_2	46.5248320792241	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	NA	False	NA	NA	False	NA	NA	NA	70349665	70332705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553
tx.27496	chr9	+	2284	14	FSM	ENSMUSG00000013584.6	ENSMUST00000034723.6	2264	14	-20	0	-20	0	multi-exon	FALSE	canonical	2	4	junction_1	2.4973358585766	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTTGTGTTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	71123050	71203525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_71123246_71159879_71159985_71160197_71160339_71162315_71162446_71169012_71169075_71171068_71171198_71171314_71171429_71188885_71188989_71190659_71190845_71192135_71192301_71192397_71192556_71193201_71193277_71200887_71200977_71202892
tx.27497	chr9	-	3908	9	ISM	ENSMUSG00000032232.15	ENSMUST00000121322.8	6541	18	120250	0	-3002	0	3prime_fragment	FALSE	canonical	1	2	junction_8	1.6583123951777	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGGCTCTTGTATTAT	NA	False	NA	NA	False	NA	NA	NA	71558634	71533790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_71536675_71537757_71537922_71538143_71538253_71539012_71539138_71539879_71539964_71548640_71548731_71552773_71552936_71557503_71557675_71558515
tx.27498	chr9	-	4858	22	NIC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	27.1649033274392	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGTTTTCCACAGAAT	9317	False	NA	NA	False	NA	NA	NA	72019190	71751533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71913982_71914045_71922919_71922994_72016957_72017031_72018019_72018117_72018857
tx.27499	chr9	-	2981	8	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-8	-26	intron_retention	FALSE	canonical	3	143	junction_7	34.0311981713779	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCAGCTGTCATCAGTA	7868	False	NA	NA	False	NA	NA	NA	72399251	72385044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
tx.275	chr1	+	1839	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	2	69	2	-69	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	161	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTTTAAGTTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	53336255	53349399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
tx.2750	chr11	+	4969	11	FSM	ENSMUSG00000020261.16	ENSMUST00000108872.9	5264	11	-12	307	-12	-307	multi-exon	TRUE	canonical	3	47	junction_5	8.1516869419771	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTATATCGTAAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	55095163	55126849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192
tx.27500	chr9	-	5238	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	29	5	intron_retention	FALSE	non_canonical	3	21	junction_3	13.6587694713351	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	72946904	72921940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_72923578_72924672_72924854_72925151_72927451_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
tx.27501	chr9	+	7434	39	NIC	ENSMUSG00000034593.17	novel	6480	40	NA	NA	-21	530	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	15.1526169539792	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGCCTGAATGTCCT	2312	False	NA	NA	False	NA	NA	NA	74978448	75126765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
tx.27502	chr9	-	3841	8	FSM	ENSMUSG00000032360.17	ENSMUST00000063140.15	3761	8	-77	-3	-77	3	multi-exon	FALSE	canonical	0	0	junction_1	1.0690449676497	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATAATCGAATATTATTT	NA	False	NA	NA	False	NA	NA	NA	76230970	76133158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_76135488_76137785_76138009_76140181_76140304_76143450_76143672_76153628_76153745_76161742_76161987_76166933_76167113_76230563
tx.27503	chr9	-	1851	13	NNC	ENSMUSG00000001366.15	novel	1850	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	21.7030143835674	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGATGGCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	78016346	77988780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008810_78008969_78011552_78011637_78016283
tx.27504	chr9	+	2399	2	ISM	ENSMUSG00000097574.3	ENSMUST00000180974.2	1444	4	34	-2	34	2	intron_retention	FALSE	canonical	3	12	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	78083229	78086163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_78083318_78083852
tx.27505	chr9	+	2498	2	NNC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	34	2	intron_retention	FALSE	canonical	3	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	78083229	78086163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_78083417_78083852
tx.27506	chr9	-	6164	6	FSM	ENSMUSG00000032328.13	ENSMUST00000153815.8	2662	6	98	-3600	98	-9	multi-exon	FALSE	canonical	3	408	junction_1	22.8508205541945	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	79700614	79676233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
tx.27507	chr9	-	10494	40	NNC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	-1	-260	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	12.9783616000821	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTAGAGCCTCATGA	NA	False	NA	NA	False	NA	NA	NA	82857570	82748471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789109_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
tx.27508	chr9	-	6328	6	ISM	ENSMUSG00000032253.14	ENSMUST00000190774.2	3830	17	16139	-3891	11955	-272	3prime_fragment	FALSE	canonical	3	58	junction_2	7.54718490564528	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTAAGCCATTTTGT	NA	False	NA	NA	False	NA	NA	NA	82762286	82748483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164
tx.27509	chr9	-	3776	6	ISM	ENSMUSG00000056919.10	ENSMUST00000144137.2	3131	12	-19	15466	-19	-15466	5prime_fragment	FALSE	canonical	3	55	junction_2	7.17216843081644	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTATGATTTACTTT	NA	False	NA	NA	False	NA	NA	NA	87137360	87123239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
tx.2751	chr11	+	5232	12	NNC	ENSMUSG00000020261.16	novel	5264	11	NA	NA	-7	0	intron_retention	TRUE	canonical	0	0	junction_11	18.7880742902829	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCAAACTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	55095168	55127156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55127000_55127038
tx.27510	chr9	+	2517	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_3	8.87411967464942	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATTTGTTGTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	88948976	88959825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957256_88957340_88957565
tx.27511	chr9	+	4448	2	FSM	ENSMUSG00000066442.18	ENSMUST00000127868.2	655	2	-3542	-251	0	-4	multi-exon	FALSE	canonical	3	393	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	89093456	89122275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_89097524_89121894
tx.27512	chr9	+	1373	12	FSM	ENSMUSG00000032359.15	ENSMUST00000034915.15	1617	12	242	2	3	0	multi-exon	FALSE	canonical	2	5	junction_2	3.46648653907957	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGGCGTAGGTCTCTA	NA	False	NA	NA	False	NA	NA	NA	89936561	89958140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_89936688_89942531_89942564_89943571_89943678_89944769_89944841_89946205_89946311_89946559_89946647_89947444_89947501_89949079_89949162_89950457_89950527_89953871_89953979_89956920_89957047_89957734
tx.27513	chr4	+	226	1	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTTCATTTTAATCC	NA	False	NA	NA	False	NA	NA	NA	126993289	126993515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr4_+_126993300_126993500
tx.27514	chr9	+	5378	24	FSM	ENSMUSG00000032363.16	ENSMUST00000113060.3	5098	24	-283	3	-126	-1	multi-exon	FALSE	canonical	2	9	junction_18	7.51406997818433	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTTTGGCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	90044995	90082152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
tx.27515	chr9	+	2272	6	ISM	ENSMUSG00000032363.16	ENSMUST00000113060.3	5098	24	29796	2	2038	0	3prime_fragment	FALSE	canonical	3	18	junction_1	7.67854152818099	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTTTGGCCTTGTCTT	988	False	NA	NA	False	NA	NA	NA	90075074	90082153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
tx.27516	chr9	-	6733	5	ISM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	38171	1	8521	-1	3prime_fragment	FALSE	canonical	3	677	junction_3	63.7078291891978	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACTTGGTGTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	95355776	95338951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095
tx.27518	chr9	-	4295	11	FSM	ENSMUSG00000032839.14	ENSMUST00000190604.7	2757	11	5	-1543	5	-2	multi-exon	FALSE	canonical	1	1	junction_5	2.90516780926679	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGATAGAGCTTGAGC	NA	False	NA	NA	False	NA	NA	NA	95632406	95587136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_95589021_95590253_95590449_95590698_95590901_95592168_95592345_95598135_95598280_95599572_95599713_95603185_95603523_95605147_95605344_95608477_95608610_95614059_95614263_95631720
tx.2752	chr11	-	2130	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	170	0	-10	0	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	704	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3846	False	NA	NA	False	NA	NA	NA	55310736	55285325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
tx.27520	chr9	+	7278	12	NNC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	12	-24	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	138.755805477533	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	96078339	96205675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.27521	chr9	+	3284	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	304	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	157.724265341611	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGATTGAGGCCATTAA	NA	False	NA	NA	False	NA	NA	NA	96078347	96201441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96117274_96117351_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.27522	chr9	+	7319	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	124.802733232178	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	NA	NA	NA	96078354	96205699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
tx.27523	chr9	+	3454	16	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	0	intron_retention	FALSE	canonical	2	26	junction_9	91.8139180928227	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	NA	False	NA	NA	NA	99125505	99182457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
tx.27524	chr9	-	4361	19	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	13	-21	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	64.1013857441552	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCAACTTCTTTAAAGG	NA	False	NA	NA	False	NA	NA	NA	99450939	99360445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
tx.27525	chr9	+	4456	15	ISM	ENSMUSG00000037784.15	ENSMUST00000112885.9	4350	17	7978	-812	2695	812	3prime_fragment	FALSE	canonical	3	10	junction_12	4.18695739707224	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCTCGTGTTTGTCACA	NA	False	NA	NA	False	NA	NA	NA	99519608	99552121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
tx.27526	chr9	+	1131	2	Antisense	novelGene_ENSMUSG00000032473.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTTGAGACTCTTAAT	1494	False	NA	NA	False	NA	NA	NA	99577296	99581843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr9_+_99577420_99580835
tx.27527	chr9	-	1724	2	FSM	ENSMUSG00000070287.4	ENSMUST00000093792.4	1590	2	-139	5	-139	-3	multi-exon	FALSE	canonical	2	5	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTCATGATCTTTGT	NA	False	NA	NA	False	NA	NA	NA	100453282	100434245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_100435688_100453000
tx.27529	chr9	-	2850	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	13	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	123.30433562399	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGTCTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	103079315	103065231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_103066653_103066899_103067676_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
tx.2753	chr11	-	482	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	61	-2	19	2	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	469	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTCTGGTGTATGTTCT	NA	False	NA	NA	False	NA	NA	NA	55352004	55337464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
tx.27530	chr9	-	827	2	FSM	ENSMUSG00000042757.17	ENSMUST00000186455.3	1591	2	-73	837	-26	-837	multi-exon	FALSE	canonical	3	33	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	103639062	103629448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_103630167_103638953
tx.27532	chr9	-	4000	4	FSM	ENSMUSG00000020258.17	ENSMUST00000036382.13	4209	4	212	-3	204	3	multi-exon	FALSE	canonical	2	8	junction_1	3.55902608401044	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCTTACTAATTAT	5687	False	NA	NA	False	NA	NA	NA	106035105	106030052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687
tx.27533	chr9	+	4583	2	NIC	ENSMUSG00000053716.10	novel	3213	3	NA	NA	4	0	intron_retention	FALSE	canonical	3	159	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGTCCTGGTGTTCA	NA	False	NA	NA	False	NA	NA	NA	106245834	106252920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_106248335_106250837
tx.27534	chr9	-	2357	11	FSM	ENSMUSG00000023249.16	ENSMUST00000067218.14	2962	11	287	318	7	-13	multi-exon	FALSE	canonical	1	1	junction_10	2.71293199325011	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAAACTCATTTCTCC	NA	False	NA	NA	False	NA	NA	NA	106353861	106347838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997_106353182_106353691
tx.27535	chr9	+	2148	3	FSM	ENSMUSG00000032578.8	ENSMUST00000085102.6	2850	3	675	27	-9	17	multi-exon	FALSE	canonical	1	4	junction_1	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGCCTTCAGTGGGGT	NA	False	NA	NA	False	NA	NA	NA	107173899	107179159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107174234_107177122_107177344_107177566
tx.27536	chr9	+	3279	15	ISM	ENSMUSG00000010066.16	ENSMUST00000085092.12	5183	39	124208	-353	-2569	3	3prime_fragment	FALSE	canonical	0	0	junction_2	3.03466368374971	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTCTATCCACTGTGT	1233	False	NA	NA	False	NA	NA	NA	107401286	107406545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_107401392_107401596_107401688_107401810_107401874_107402029_107402134_107402355_107402455_107402542_107402632_107402811_107402860_107403099_107403172_107403261_107403415_107403541_107403595_107403683_107403740_107403886_107404014_107404135_107404246_107404352_107404436_107404519
tx.27537	chr9	+	1833	6	FSM	ENSMUSG00000010067.14	ENSMUST00000093786.9	1787	6	-51	5	-51	-1	multi-exon	FALSE	canonical	1	1	junction_1	27.6723688902848	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTTTGGACTCTATAG	NA	False	NA	NA	False	NA	NA	NA	107428702	107439461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_107429046_107431336_107431444_107434651_107434757_107434968_107435267_107435385_107435502_107438597
tx.27538	chr9	+	2763	5	NIC	ENSMUSG00000032583.8	novel	2042	6	NA	NA	-23	-7	intron_retention	FALSE	canonical	3	19	junction_2	6.41774882649672	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACTGTTGCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	107765326	107780326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_107765602_107775870_107776011_107777225_107779160_107779814_107779963_107780060
tx.27539	chr9	+	1113	3	ISM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	13085	7	13085	-2	3prime_fragment	FALSE	canonical	3	23	junction_1	5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGCCCTTTGTCATT	NA	False	NA	NA	False	NA	NA	NA	107778465	107780331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_107779160_107779814_107779963_107780060
tx.2754	chr11	+	2692	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	49	3962	16	-3962	multi-exon	TRUE	canonical	3	6361	junction_7	586.595613027527	10558	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACTTCATCTGGCAA	NA	False	NA	NA	False	NA	NA	NA	55360559	55391702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
tx.27540	chr9	-	1342	6	NNC	ENSMUSG00000032589.15	novel	7496	8	NA	NA	5505	-3057	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.98799279134702	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTTTTGTTGTTGTT	3808	False	NA	NA	False	NA	NA	NA	107982107	107976278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_-_107977097_107980168_107980290_107980388_107980482_107980862_107980918_107981142_107981275_107981984
tx.27541	chr9	+	3938	12	ISM	ENSMUSG00000023473.14	ENSMUST00000213524.3	11571	36	16817	6	-98	-6	3prime_fragment	FALSE	canonical	1	2	junction_4	2.83717936987768	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTTGTTCCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	108720335	108730162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_108720500_108720742_108720918_108721124_108721238_108721661_108721742_108722240_108722368_108722900_108723018_108723112_108723262_108723518_108723629_108723906_108724066_108724743_108724945_108725794_108726675_108728499
tx.27542	chr9	+	3824	14	ISM	ENSMUSG00000053646.14	ENSMUST00000072093.13	8649	38	16295	-116	4890	116	3prime_fragment	FALSE	canonical	2	13	junction_5	3.15103063819447	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGTCTCTCCCCCTTT	3701	False	NA	NA	False	NA	NA	NA	108940751	108949101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
tx.27543	chr9	-	8847	54	FSM	ENSMUSG00000056724.16	ENSMUST00000167320.8	8803	54	-48	4	-48	-4	multi-exon	FALSE	canonical	2	5	junction_38	4.32878054960468	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCGGTTTCTTGAGTAC	NA	False	NA	NA	False	NA	NA	NA	110483277	110453860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110455699_110455800_110455974_110456145_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457373_110457461_110457572_110457686_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464273_110464365_110464520_110464681_110464785_110464928_110465089_110465362_110465497_110465629_110465805_110465958_110466052_110466142_110466226_110466431_110466754_110466946_110467067_110467159_110467293_110467372_110467975_110468361_110468461_110468847_110468932_110470478_110470560_110470838_110470946_110471078_110471362_110471452_110471539_110472779_110472863_110473076_110473196_110473287_110473370_110473484_110473614_110473697_110473787_110482964
tx.27544	chr9	+	7839	12	ISM	ENSMUSG00000062296.9	ENSMUST00000078626.8	10520	22	53749	0	-9332	0	3prime_fragment	FALSE	canonical	0	0	junction_2	1.97505099840004	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTCTTTTTGTTTAT	9364	False	NA	NA	False	NA	NA	NA	111194555	111224843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_+_111196617_111202013_111202214_111202475_111202614_111206845_111206990_111207877_111208035_111212141_111212231_111215438_111215543_111215639_111215773_111218225_111218372_111219014_111222065_111222825_111222925_111223325
tx.27545	chr9	+	3168	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-23	-261	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	67.3308064707382	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATGTGAAATACTGT	9620	False	NA	NA	False	NA	NA	NA	117869601	117892646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890517_117890586_117890781
tx.27546	chr9	+	4458	8	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	71.8405263377837	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTATTTTGTGATTCA	9621	False	NA	NA	False	NA	NA	NA	117869602	117892907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117880163_117880421_117880571_117884883_117884979_117888124_117888244_117890781
tx.27547	chr9	+	2275	7	FSM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-42	266	-20	-266	multi-exon	FALSE	canonical	3	128	junction_5	18.3734409769464	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAGTGTTTATAAGGGA	9623	False	NA	NA	False	NA	NA	NA	117869604	117889286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124
tx.2755	chr11	-	2577	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	412	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCGTGGTATTTAATAG	NA	False	NA	NA	False	NA	NA	NA	57409461	57373819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
tx.27550	chr9	+	2463	5	NIC	ENSMUSG00000032446.15	novel	3560	6	NA	NA	425	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.69740215917033	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATTTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	118308353	118315200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_+_118308615_118310332_118310455_118311056_118311216_118311300_118311363_118313341
tx.27551	chr9	-	3337	10	NIC	ENSMUSG00000010651.5	novel	1689	12	NA	NA	28	-20	intron_retention	FALSE	canonical	1	2	junction_7	64.0146588150704	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGCAGTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	118986133	118977110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_118977482_118977801_118977948_118978029_118978086_118978338_118978519_118978667_118978859_118979891_118979973_118980883_118980983_118982993_118984871_118985658_118985753_118985891
tx.27552	chr9	-	5115	8	ISM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	4177	-1271	-536	1271	3prime_fragment	FALSE	canonical	3	103	junction_5	10.7018976001875	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTTTTCAGTCATTG	NA	False	NA	NA	False	NA	NA	NA	119762454	119753051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327
tx.27553	chr9	-	5492	6	FSM	ENSMUSG00000061536.14	ENSMUST00000139193.2	938	6	-50	-4504	0	-2	multi-exon	FALSE	canonical	2	3	junction_4	7.62627038597505	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGTTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	121534095	121509112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121524599_121524809_121533989
tx.27554	chr9	+	6882	16	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	14.7325791662183	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTTGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	121548269	121585902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
tx.27555	chr9	-	5057	7	NIC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	-12	-1844	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	123.676661770387	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGAGTACTTTGGTTG	8726	False	NA	NA	False	NA	NA	NA	122942257	122903218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122927987_122928040_122929327_122929658_122942060
tx.27556	chr9	-	3212	8	ISM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	5080	554	79	-554	3prime_fragment	FALSE	canonical	3	93	junction_4	7.85324578679129	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTCTGGTTATGCATA	NA	False	NA	NA	False	NA	NA	NA	123541610	123526630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494
tx.27557	chr9	+	4464	9	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-467	1097	intron_retention	TRUE	canonical	3	98	junction_1	29.9322150867589	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	124195359	124202493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr9_+_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
tx.27559	chrX	-	2905	5	NIC	ENSMUSG00000039231.19	novel	2778	6	NA	NA	14	1	intron_retention	FALSE	canonical	3	73	junction_4	16.9908063375462	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTGAGATTTGGGAGA	7314	False	NA	NA	False	NA	NA	NA	7940538	7927672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_7929223_7929934_7930297_7936826_7937490_7938561_7938708_7940354
tx.2756	chr11	-	2996	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_13	127.824121030265	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATAAGCGTGGTATTTA	NA	False	NA	NA	False	NA	NA	NA	57409416	57373823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57408930
tx.27560	chrX	+	176	2	Intergenic	novelGene_398	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTACTG	NA	False	NA	NA	False	NA	NA	NA	8008054	8018674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_8008104_8018547
tx.27561	chrX	-	179	2	Intergenic	novelGene_400	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	12749669	12696926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_12696960_12749523
tx.27562	chrX	-	5372	16	NIC	ENSMUSG00000037341.15	novel	2512	17	NA	NA	-8	2911	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2.24697327284703	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAGCTTGCTTGAGACA	NA	False	NA	NA	False	NA	NA	NA	20158054	19969081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_19972454_19974913_19975020_19986758_19986842_19998009_19998074_20025053_20025208_20025870_20025983_20028166_20028281_20028382_20028472_20028672_20028779_20031168_20031311_20032246_20032353_20052298_20052412_20055082_20055160_20068948_20069027_20071604_20071805_20157598
tx.27563	chrX	+	4011	11	NNC	ENSMUSG00000001127.13	novel	1474	11	NA	NA	-2	1583	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	115.601081309822	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCGGACTCTAGATTCTT	6303	False	NA	NA	False	NA	NA	NA	20714811	20723332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20720498
tx.27564	chrX	+	2778	3	ISM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	-36	17295	-36	-16378	5prime_fragment	FALSE	canonical	3	15	junction_1	3	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTCCACCTCCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	36007275	36023560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_36007672_36015785_36016028_36021420
tx.27565	chrX	+	1806	4	NNC	ENSMUSG00000037636.7	novel	1111	5	NA	NA	5	-17198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.83176086632785	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATGTATGCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	36007316	36022740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_36007672_36015785_36016028_36021420_36021594_36021704
tx.27566	chrX	+	767	5	NNC	ENSMUSG00000079637.11	novel	720	5	NA	NA	-38	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	23.1988685068906	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	36635294	36640033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_36635407_36635568_36635981_36637508_36637555_36637822_36637872_36639885
tx.27567	chrX	+	800	4	FSM	ENSMUSG00000079637.11	ENSMUST00000115190.11	762	4	-36	-2	-36	2	multi-exon	FALSE	canonical	3	17	junction_3	17.9133717900592	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	36635296	36640034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36635407_36635568_36635981_36637508_36637555_36639802
tx.27568	chrX	+	849	5	FSM	ENSMUSG00000096788.9	ENSMUST00000184746.2	735	5	-21	-93	1	2	multi-exon	FALSE	canonical	1	2	junction_3	31.4523449046331	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	36712105	36723468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36721255_36721305_36723236
tx.27569	chrX	-	4160	4	Fusion	ENSMUSG00000081195.3_ENSMUSG00000106388.2	novel	322	3	NA	NA	-50	103	multi-exon	FALSE	canonical	2	3	junction_3	4.54606056566195	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCTCAGGTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	36865134	36857919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chrX_-_36858142_36859175_36859222_36861051_36864809_36864999
tx.2757	chr11	+	4805	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	18	4	-4	-3	multi-exon	FALSE	canonical	3	17	junction_1	35	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTGAATGATGTAT	NA	False	NA	NA	False	NA	NA	NA	57409507	57424637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_57409539_57418684_57419116_57420294
tx.27570	chrX	+	2671	8	NNC	ENSMUSG00000031101.7	novel	2677	8	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	1.67819144635296	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTACCGTCGCCTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	47235319	47250440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_47235595_47243402_47243499_47243852_47244000_47246295_47246438_47247609_47247759_47247918_47248129_47248280_47248432_47248939
tx.27571	chrX	+	7507	15	NIC	ENSMUSG00000036959.16	novel	5591	12	NA	NA	8	6	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	8.55027150780271	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCAGGGCCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	47430945	47496932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_47431127_47431677_47431758_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
tx.27572	chrX	+	2781	3	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	9982	0	-1194	0	3prime_fragment	FALSE	canonical	3	347	junction_2	21.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	False	NA	NA	False	NA	NA	NA	47793862	47799600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_47795312_47797766_47797951_47798452
tx.27573	chrX	-	3181	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	-8	53	-8	-53	multi-exon	TRUE	canonical	3	25	junction_4	10.7695042700313	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGGCTGTGAGGCTTC	NA	False	NA	NA	False	NA	NA	NA	48377127	48099387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
tx.27574	chrX	-	4938	12	FSM	ENSMUSG00000036131.13	ENSMUST00000060650.7	2112	12	-291	-2535	-291	2535	multi-exon	FALSE	canonical	1	1	junction_1	0.995859195463938	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGTCTTTCCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	50031878	49981521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_49985119_49986126_49986203_49986320_49986390_49987600_49987765_49989202_49989299_49990555_49990704_49990871_49990987_49998627_49998726_50001456_50001536_50004222_50004266_50005054_50005160_50031530
tx.27575	chrX	-	1549	7	FSM	ENSMUSG00000036109.18	ENSMUST00000114875.8	4649	7	-82	3182	76	1	multi-exon	FALSE	canonical	0	0	junction_6	9.88966913276453	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTTTCATGCTATAGTG	NA	False	NA	NA	False	NA	NA	NA	50294791	50209327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50294650
tx.27576	chrX	-	5180	2	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-25	2732	intron_retention	FALSE	canonical	3	81	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCAAGTGTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	51061674	51054839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_51059953_51061607
tx.27577	chrX	-	6162	31	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-46	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.2654573149455	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATTCGAGTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	59449218	59268646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_59271154_59274507_59274613_59281731_59281798_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
tx.27578	chrX	+	2504	3	Genic_Genomic	ENSMUSG00000083576.2	novel	1100	1	NA	NA	-57688	364	multi-exon	FALSE	canonical	2	5	junction_1	12.5	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTGGCTTACTA	NA	False	NA	NA	False	NA	NA	NA	61240965	61300117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_+_61241476_61249243_61249365_61298244
tx.27579	chrX	+	6174	4	FSM	ENSMUSG00000033361.14	ENSMUST00000170096.8	3408	4	-155	-2611	-154	-1	multi-exon	FALSE	canonical	0	0	junction_1	4.49691252107735	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTACCTTGTCCTGGTC	NA	False	NA	NA	False	NA	NA	NA	71006075	71016327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_71006386_71009420_71009459_71010107_71010269_71010662
tx.2758	chr11	+	4836	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	0	3	0	-3	multi-exon	FALSE	canonical	3	62	junction_1	12.5	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTGAATGATGTAT	NA	False	NA	NA	False	NA	NA	NA	57409512	57424637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_57409575_57418684_57419116_57420294
tx.27580	chrX	+	2902	7	Genic_Genomic	ENSMUSG00000033343.2	novel	948	1	NA	NA	-4098	463	multi-exon	FALSE	canonical	1	2	junction_6	3.54729944229879	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCGCCGGGCATCTGTT	NA	False	NA	NA	False	NA	NA	NA	71261524	71267033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chrX_+_71261614_71262220_71262501_71263739_71263837_71264233_71264433_71264562_71264653_71264786_71264860_71264959
tx.27582	chrX	-	3574	6	NNC	ENSMUSG00000071745.2	novel	2862	5	NA	NA	21	9	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	21.0902821223425	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTCTAAGACAGCTCT	NA	False	NA	NA	False	NA	NA	NA	72193035	72180828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72187382_72187487_72192347
tx.27583	chrX	-	5245	27	NIC	ENSMUSG00000031391.19	novel	5113	29	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	1.70276489393682	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACCATTCCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	72924424	72897385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_72898873_72899364_72899438_72899748_72899887_72900237_72900400_72900508_72900629_72900773_72900948_72901026_72901150_72901243_72901446_72901647_72901764_72902908_72903132_72903307_72903379_72903624_72903823_72904044_72904156_72904325_72904451_72904653_72904811_72904911_72905079_72905187_72905300_72905883_72906028_72906165_72906298_72906453_72906639_72906762_72906875_72907764_72907936_72908029_72908153_72909222_72909423_72909660_72909767_72913334_72913523_72924299
tx.27584	chrX	+	333	2	ISM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	1861	2	884	-2	3prime_fragment	FALSE	canonical	3	9593	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTTGTTTCTGATTC	NA	False	NA	NA	False	NA	NA	NA	73316326	73316739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_73316441_73316520
tx.27585	chrX	-	2084	3	NIC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	890	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAATCCTGTGTAAT	NA	False	NA	NA	False	NA	NA	NA	73412131	73409324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_73411193_73411758_73411865_73412021
tx.27586	chrX	+	1210	9	NNC	ENSMUSG00000081357.2	novel	648	7	NA	NA	-936	304	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	23.8507730482683	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGGATGAGTCATT	NA	False	NA	NA	False	NA	NA	NA	73987632	73995954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_73987777_73988067_73988151_73988537_73988666_73989350_73989420_73991236_73991355_73992188_73992289_73993476_73993576_73995367_73995464_73995581
tx.27587	chrX	+	8029	8	NNC	ENSMUSG00000031201.18	novel	2521	9	NA	NA	-1	1700	intron_retention	FALSE	non_canonical	0	0	junction_2	392.308864159299	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGGTCATGGTATTT	NA	False	NA	NA	False	NA	NA	NA	74460304	74499307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
tx.27588	chrX	+	1306	3	Intergenic	novelGene_404	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGTTTCCGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	77988958	77991741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_77989454_77990197_77990608_77991340
tx.27589	chrX	+	1081	4	Intergenic	novelGene_405	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_3	1.24721912892465	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGGTTTCCGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	77989081	77991740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_+_77989163_77989263_77989454_77990197_77990608_77991340
tx.2759	chr11	+	5032	2	ISM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	8914	3	4637	-3	3prime_fragment	FALSE	canonical	3	87	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTGAATGATGTAT	NA	False	NA	NA	False	NA	NA	NA	57418426	57424637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_57419116_57420294
tx.27590	chrX	-	1619	3	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	63.5	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCTGTGGTTTTTGCAT	1186	False	NA	NA	False	NA	NA	NA	83486690	83467130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chrX_-_83468550_83473568_83473652_83486573
tx.27591	chrX	-	3433	18	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-12	-659	combination_of_known_splicesites	FALSE	canonical	2	3	junction_17	37.5564166164151	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	NA	False	NA	NA	NA	84820271	84746201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84820031
tx.27592	chrX	-	7122	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	450	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	39.8092390055887	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGTGGAGTGTTGGCT	NA	False	NA	NA	False	NA	NA	NA	93166056	93118237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93165527
tx.27594	chrX	+	1385	4	NIC	ENSMUSG00000043929.17	novel	1227	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_3	13.4246870437348	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGCCTGGCATGTTT	NA	False	NA	NA	False	NA	NA	NA	93278532	93297673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_93279027_93285550_93285602_93296020_93296733_93297545
tx.27595	chrX	+	5219	8	ISM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	7	-126	7	-6	intron_retention	FALSE	canonical	3	325	junction_1	49.0588983794386	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGCTGGCCTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	93410729	93460693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065
tx.27596	chrX	+	6014	2	NIC	ENSMUSG00000071723.8	novel	1925	5	NA	NA	-6	3	intron_retention	FALSE	canonical	2	14	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTGGTCATAATTTT	4250	False	NA	NA	False	NA	NA	NA	93679668	93686853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_93685195_93686365
tx.27598	chrX	-	6490	7	NNC	ENSMUSG00000034457.11	novel	2153	7	NA	NA	421	-1	intron_retention	FALSE	canonical	1	2	junction_6	42.2163738639668	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTTGTTTATTCCT	NA	False	NA	NA	False	NA	NA	NA	96420335	96377446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96419832
tx.27599	chrX	-	1366	3	FSM	ENSMUSG00000031304.19	ENSMUST00000127538.2	558	3	-82	-726	15	196	multi-exon	FALSE	canonical	3	28	junction_2	5.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100311846	100310075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_100311102_100311316_100311471_100311660
tx.276	chr1	+	1658	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	28	182	-2	-6	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	NA	False	NA	NA	NA	53352810	53365320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
tx.2760	chr11	-	5283	1	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	296	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	57450919	57445636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_57445600_57450900
tx.27600	chrX	-	5982	32	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.6597210640311	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTCTGGTGTTACTGC	NA	False	NA	NA	False	NA	NA	NA	101687869	101557583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_101559822_101560382_101560476_101561048_101561103_101564359_101564531_101571672_101571724_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
tx.27601	chrX	+	825	7	FSM	ENSMUSG00000031329.5	ENSMUST00000033691.5	812	7	-4	-9	-4	9	multi-exon	FALSE	canonical	3	20	junction_2	4.2687494916219	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTGTGTCACTGTTTC	NA	False	NA	NA	False	NA	NA	NA	102458068	102468195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_102458253_102459640_102459677_102460356_102460394_102461814_102461897_102464105_102464207_102465593_102465653_102467869
tx.27602	chrX	-	5217	10	NIC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	76	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	33.2903426473842	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGTCTTTTCTATA	NA	False	NA	NA	False	NA	NA	NA	103714594	103580574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103676189_103676217_103714269
tx.27603	chrX	-	4307	3	ISM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	110347	3	110347	-3	3prime_fragment	FALSE	canonical	3	108	junction_2	3.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTTGTGTCTTTTCT	1292	False	NA	NA	False	NA	NA	NA	103604323	103580577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_103584775_103588433_103588511_103604290
tx.27604	chrX	+	4234	3	FSM	ENSMUSG00000049929.8	ENSMUST00000060576.8	4238	3	3	1	3	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTTTGGTCAGTTAT	NA	False	NA	NA	False	NA	NA	NA	105964233	105977505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_105964596_105967683_105967786_105973735
tx.27605	chrX	-	5069	29	ISM	ENSMUSG00000063663.12	ENSMUST00000041866.12	5839	39	43133	-358	43101	358	3prime_fragment	FALSE	canonical	2	6	junction_6	5.35666664550076	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAAGGTGCCAAATGCA	NA	False	NA	NA	False	NA	NA	NA	107834845	107785815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750
tx.27606	chrX	-	9421	9	FSM	ENSMUSG00000034551.13	ENSMUST00000038472.7	9385	9	-40	4	-40	-4	multi-exon	FALSE	canonical	1	2	junction_8	2.9474565306379	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGACCTCTCTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	110606816	110479633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_-_110487096_110492491_110492615_110498891_110498976_110502657_110502738_110510314_110510523_110531997_110532145_110559533_110559588_110569330_110570441_110606663
tx.27607	chrX	+	4229	9	FSM	ENSMUSG00000025529.15	ENSMUST00000113409.8	4330	9	118	-17	118	9	multi-exon	FALSE	canonical	2	5	junction_6	4.35889894354067	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTAAAGTTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	111510340	111544776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_111510603_111513964_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111536866_111537002_111537800_111537846_111541522_111541667_111542075
tx.27608	chrX	+	3953	17	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-18	-68235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.5240441338531	1	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTACCTCATCCATAAT	NA	False	NA	NA	False	NA	NA	NA	128650526	128875044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243
tx.27609	chrX	+	1286	4	NNC	ENSMUSG00000079428.9	novel	453	4	NA	NA	432	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	3.55902608401044	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTAAGACTTGATC	NA	False	NA	NA	False	NA	NA	NA	135115959	135126843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_135116173_135121881_135122041_135125650_135125722_135126000
tx.2761	chr11	-	4436	2	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450919	57445632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_57446486_57447336
tx.27610	chrX	-	1481	3	ISM	ENSMUSG00000023443.14	ENSMUST00000113066.9	1692	4	979	0	979	0	3prime_fragment	FALSE	canonical	3	47	junction_1	5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTTTGAGAGTTATA	NA	False	NA	NA	False	NA	NA	NA	136019941	136016145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_-_136016755_136018006_136018053_136019115
tx.27611	chrX	+	2253	4	ISM	ENSMUSG00000042473.9	ENSMUST00000096313.4	5094	21	-31	45773	-31	-37611	intron_retention	FALSE	canonical	2	3	junction_2	0.816496580927726	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATAATTTTGCTCTGG	NA	False	NA	NA	False	NA	NA	NA	138585713	138608381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chrX_+_138586060_138601747_138601859_138605350_138605470_138606704
tx.27612	chrX	+	5949	21	FSM	ENSMUSG00000042473.9	ENSMUST00000096313.4	5094	21	-31	-824	-31	824	multi-exon	FALSE	canonical	0	0	junction_6	1.5644487847162	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCCAAATGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	138585713	138654978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_138586060_138601747_138601859_138605350_138605470_138606704_138606931_138607865_138608107_138613002_138613211_138614003_138614169_138624651_138624802_138625826_138625978_138626412_138626628_138633006_138633125_138634703_138634990_138637037_138637168_138637702_138637802_138642675_138642745_138642900_138643142_138644104_138644171_138645956_138646041_138647099_138647157_138650696_138650795_138652209
tx.27613	chrX	+	2046	7	NNC	ENSMUSG00000094885.8	novel	2028	7	NA	NA	-4959	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	5.37742193496723	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	147866351	147921152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_147866458_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
tx.27614	chrX	+	1952	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_2	17.171552702718	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	NA	False	NA	NA	NA	149371206	149426874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_149371339_149371940_149372041_149372935_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
tx.27615	chrX	+	6067	14	FSM	ENSMUSG00000041115.17	ENSMUST00000112604.8	5967	14	-100	0	-96	0	multi-exon	FALSE	canonical	1	1	junction_2	2.94726831702585	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCCTCTGCCTCCTA	NA	False	NA	NA	False	NA	NA	NA	150927167	151008232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_150928176_150949929_150949960_150985903_150986166_150986927_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005917
tx.27616	chrX	+	6486	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	1754	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	64.8445551031897	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTGGAAGCAAGATTAT	3934	False	NA	NA	False	NA	NA	NA	152020410	152180882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_152020479_152020946_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
tx.27617	chrX	+	1348	2	FSM	ENSMUSG00000046550.9	ENSMUST00000049999.9	1309	2	-41	2	11	-2	multi-exon	FALSE	canonical	3	21	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAGTCATCTAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	152615247	152617237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chrX_+_152615545_152616186
tx.27619	chrX	-	5669	21	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-68	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	4.24381903478459	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGCACCGACTTTATT	NA	False	NA	NA	False	NA	NA	NA	156826358	156604421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
tx.2762	chr11	-	3232	2	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	0	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450920	57445632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_57446486_57448541
tx.27620	chrX	+	2886	24	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-110	298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.4676460017611	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGGATTAACAGTATTG	NA	False	NA	NA	False	NA	NA	NA	158038667	158147034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_+_158038716_158061105_158061200_158062162_158062200_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
tx.27621	chrX	+	4650	15	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	24	3	intron_retention	FALSE	canonical	1	49	junction_5	31.6824969382923	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTTTTGACTTGTAC	NA	False	NA	NA	False	NA	NA	NA	158197591	158281582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030
tx.27622	chrX	+	3269	17	NIC	ENSMUSG00000040990.18	novel	7317	18	NA	NA	-12	-29	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	5.29150262212918	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAATAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	158410255	158757134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158749209_158749479_158754857_158754922_158756120
tx.27623	chrX	-	5163	13	NNC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	55	2848	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	14.8237328482254	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTTTTGTCGGGTAT	NA	False	NA	NA	False	NA	NA	NA	167456839	167434264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chrX_-_167437965_167439677_167439732_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
tx.27624	chrX	-	494	4	Intergenic	novelGene_420	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_2	6.97614984548545	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCTGCCTTACACAGTT	NA	False	NA	NA	False	NA	NA	NA	169092605	169090870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092263_169092526
tx.27625	chrX	-	1093	8	Intergenic	novelGene_422	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	22.4108210014534	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCCCCAGAGAAGTGGG	NA	False	NA	NA	False	NA	NA	NA	169094471	169090919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092333_169092526_169092592_169092967_169093033_169093216_169093264_169093449_169093545_169094086
tx.2763	chr11	+	1769	3	FSM	ENSMUSG00000020520.15	ENSMUST00000108846.2	1745	3	-22	-2	1	2	multi-exon	FALSE	canonical	3	46	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGGTGTCTGCCTGGTT	NA	False	NA	NA	False	NA	NA	NA	57536268	57617739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_57536544_57612120_57612224_57616348
tx.2764	chr11	+	4696	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	2	17	2	-17	multi-exon	FALSE	canonical	3	24	junction_9	7.98034776267445	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCAGTGTCTGGCATGT	NA	False	NA	NA	False	NA	NA	NA	57536269	57678323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
tx.2765	chr11	+	1189	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	-38	0	-38	0	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	394	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCGGTCAGGAGGATTA	NA	False	NA	NA	False	NA	NA	NA	57692424	57701043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
tx.2766	chr11	+	1411	4	NNC	ENSMUSG00000020519.6	novel	1151	4	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	255.160515928482	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCGGTCAGGAGGATTA	NA	False	NA	NA	False	NA	NA	NA	57692424	57701043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_57693116_57696869_57696993_57698849_57699171_57700767
tx.2767	chr11	+	6702	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-167	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	168.270221025441	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGCTGGTCTCCC	NA	False	NA	NA	False	NA	NA	NA	57899722	57952856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933391_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
tx.2768	chr11	+	4318	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-168	3637	-168	-3634	5prime_fragment	FALSE	canonical	3	629	junction_13	50.0992786002251	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGGTCCGTTTCC	NA	False	NA	NA	False	NA	NA	NA	57899721	57949223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
tx.2769	chr11	+	6784	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-167	0	-167	0	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	904	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	NA	False	NA	NA	NA	57899722	57952860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
tx.277	chr1	-	2371	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	50	21	50	7	multi-exon	FALSE	canonical	3	502	junction_1	45.94344349306	620	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTAGTAGTTTCACATT	NA	False	NA	NA	False	NA	NA	NA	53391861	53383796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
tx.2770	chr11	+	6733	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-153	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	170.136401342359	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGCTGGTCTCCC	NA	False	NA	NA	False	NA	NA	NA	57899736	57952856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933088_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
tx.2771	chr11	+	2640	11	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-169	11643	-169	7378	5prime_fragment	FALSE	canonical	3	653	junction_6	41.6984412178681	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTAAGAACCCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	57899720	57941217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522
tx.2772	chr11	+	4326	7	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	41936	0	9387	0	3prime_fragment	FALSE	canonical	3	480	junction_6	70.6857285611616	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	NA	False	NA	NA	NA	57941825	57952860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
tx.2773	chr11	+	2064	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-218	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.973963341066	31	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	57994760	58009420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_57994846_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
tx.2774	chr11	+	2181	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-146	0	-146	0	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	758	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	57994832	58009420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
tx.2775	chr11	-	5185	28	FSM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	22	1006	22	282	multi-exon	FALSE	canonical	3	150	junction_10	34.9266525198369	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTTGGGGTCATAGA	NA	False	NA	NA	False	NA	NA	NA	58059343	58011833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
tx.2776	chr11	-	5194	28	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	13	285	combination_of_known_junctions	TRUE	canonical	3	119	junction_10	38.087942423091	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGGGGTCATAGAATC	NA	False	NA	NA	False	NA	NA	NA	58059352	58011830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
tx.2777	chr11	-	5023	28	FSM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	21	-122	21	122	multi-exon	FALSE	canonical	3	91	junction_2	43.3607067704434	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTAGGTTATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	58059344	58011993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
tx.2778	chr11	-	4908	28	FSM	ENSMUSG00000037275.15	ENSMUST00000102711.9	4919	28	14	-3	14	3	multi-exon	FALSE	canonical	3	91	junction_2	45.8600782424762	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTCGTTCTGTGGGAG	NA	False	NA	NA	False	NA	NA	NA	58059351	58012112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
tx.2779	chr11	+	723	7	FSM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	5	-6	5	6	multi-exon	TRUE	canonical	3	1080	junction_1	114.661821603066	290	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGAATTATTGAAGTG	1486	False	NA	NA	False	NA	NA	NA	58062491	58070397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
tx.278	chr1	-	2745	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	8	540	8	-540	multi-exon	TRUE	canonical	3	57	junction_1	6.25316246521123	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAATAATAAGTATGCCC	694	False	NA	NA	False	NA	NA	NA	53824375	53795204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
tx.2780	chr11	+	4246	5	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-255	-5	intron_retention	FALSE	canonical	3	129	junction_1	17.4266319178434	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7418	False	NA	NA	False	NA	NA	NA	58197639	58205434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.2781	chr11	+	2316	10	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	82	junction_1	26.418755029031	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7672	False	NA	NA	False	NA	NA	NA	58197893	58205434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.2782	chr11	+	1949	12	FSM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-104	15	-1	-1	multi-exon	FALSE	canonical	0	0	junction_6	44.8549544883144	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTGGTGCTACAGATA	7672	False	NA	NA	False	NA	NA	NA	58197893	58205438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.2783	chr11	+	4771	4	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	8	-5	intron_retention	FALSE	canonical	3	82	junction_1	41.3548331180555	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7681	False	NA	NA	False	NA	NA	NA	58197902	58205434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_58198083_58198337_58202397_58204791_58204892_58205002
tx.2784	chr11	+	2222	11	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	13	-2	intron_retention	FALSE	canonical	3	82	junction_1	26.5083005867973	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7686	False	NA	NA	False	NA	NA	NA	58197907	58205437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.2785	chr11	+	2998	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	-22	1	4	-1	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	447	False	NA	NA	False	NA	NA	NA	58221553	58238550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
tx.2786	chr11	+	2935	6	ISM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	502	1	-23	-1	3prime_fragment	FALSE	canonical	3	119	junction_1	8.42377587546108	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	971	False	NA	NA	False	NA	NA	NA	58222077	58238550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
tx.2787	chr11	+	3833	3	FSM	ENSMUSG00000107677.3	ENSMUST00000215071.2	2719	3	-1312	198	-1312	-198	multi-exon	FALSE	canonical	3	11	junction_1	1.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAGAAACTTTCTGAAT	1835	False	NA	NA	False	NA	NA	NA	58642247	58650299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_58644171_58647616_58647657_58648429
tx.2788	chr11	+	4093	5	FSM	ENSMUSG00000072915.4	ENSMUST00000139337.3	4100	5	8	-1	8	1	multi-exon	FALSE	canonical	2	9	junction_4	6.04152298679729	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCGAGTGGGCCTCTG	NA	False	NA	NA	False	NA	NA	NA	58737991	58752783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_58738086_58739471_58739529_58745085_58745213_58746886_58746980_58749061
tx.2789	chr11	+	4221	6	NNC	ENSMUSG00000072915.4	novel	4100	5	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	8.9977775033616	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCTCCGAGTGGGCCT	NA	False	NA	NA	False	NA	NA	NA	58738000	58752780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_58738086_58739471_58739529_58741913_58742054_58745085_58745213_58746886_58746980_58749061
tx.279	chr1	-	4599	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	-18	1	-18	-1	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	241	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCACCTTTTAAACTT	6682	False	NA	NA	False	NA	NA	NA	54478148	54435163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
tx.2790	chr11	+	3881	5	NNC	ENSMUSG00000020491.16	novel	3866	5	NA	NA	12	-18	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	14.8492424049175	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCATTGTCACTTTC	NA	False	NA	NA	False	NA	NA	NA	58758053	58774096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_58758136_58759640_58759833_58767519_58767692_58769601_58769695_58770754
tx.2791	chr11	+	3814	5	FSM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	12	40	12	-40	multi-exon	FALSE	canonical	3	20	junction_3	8.74642784226795	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATCGGAAATTATTCA	NA	False	NA	NA	False	NA	NA	NA	58758053	58774074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_58758136_58759640_58759833_58767519_58767647_58769601_58769695_58770754
tx.2792	chr11	-	3888	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	-1	3	-1	-3	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGACACCATTTTCTCT	7183	False	NA	NA	False	NA	NA	NA	58795052	58778981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
tx.2793	chr11	-	1942	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	7	0	7	0	multi-exon	TRUE	canonical	3	1063	junction_2	80.5495016882303	1626	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	NA	False	NA	NA	NA	58829735	58823113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
tx.2794	chr11	-	5227	3	NNC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	1	-1	intron_retention	TRUE	canonical	1	3	junction_1	536.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTTTCCATACCTCC	NA	False	NA	NA	False	NA	NA	NA	58829741	58823114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_58826084_58826321_58828059_58829220
tx.2795	chr11	+	2266	5	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.6525267016199	75	6	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1678	False	NA	NA	False	NA	NA	NA	58868930	58882284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58879756_58881012
tx.2796	chr11	+	3519	4	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_3	37.249906785864	38	6	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1682	False	NA	NA	False	NA	NA	NA	58868934	58882284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628
tx.2797	chr11	+	5135	2	ISM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	8127	-1	8127	0	intron_retention	FALSE	canonical	3	100	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	9816	False	NA	NA	False	NA	NA	NA	58877068	58882284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_58879574_58879654
tx.2798	chr11	-	4057	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	-35	-1	-35	1	multi-exon	FALSE	canonical	3	10	junction_1	4.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTTGTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	59054600	59046193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59049486_59049663_59050005_59054176
tx.2799	chr11	-	959	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	123	-4	-17	4	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	243	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCACAGCCCTCCATAC	1593	False	NA	NA	False	NA	NA	NA	59082655	59074696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
tx.28	chr1	+	3650	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	-4	-918	-4	1	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAATTCTAATTTTCAA	9935	False	NA	NA	False	NA	NA	NA	9918617	9970996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
tx.280	chr1	-	8054	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	-21	2550	-19	-2550	multi-exon	TRUE	canonical	3	24	junction_18	5.36548800562088	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATACTCTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	54596862	54514702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
tx.2800	chr11	+	676	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	18	246	5	0	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	59093335	59096714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
tx.2801	chr11	+	827	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	3	-112	0	-2	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGACTTTTGGGGTTGA	NA	False	NA	NA	False	NA	NA	NA	59093317	59096826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
tx.2802	chr11	+	2092	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	19	-826	19	826	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGATAAATTTAACAGCT	NA	False	NA	NA	False	NA	NA	NA	59099165	59102390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
tx.2803	chr11	-	1769	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	31	0	31	0	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	2017	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1878	False	NA	NA	False	NA	NA	NA	59119065	59102239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
tx.2804	chr11	-	1961	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	132.4259793243	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGAGCCGGGTCTATA	NA	False	NA	NA	False	NA	NA	NA	59340847	59297966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333668_59340740
tx.2805	chr11	-	1909	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	-22	9	-14	1	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	317	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAGGAGCCGGGTCTA	NA	False	NA	NA	False	NA	NA	NA	59340847	59297968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
tx.2806	chr11	-	1796	4	ISM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	11492	9	8984	1	3prime_fragment	FALSE	canonical	3	264	junction_2	16.7531091641721	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAGGAGCCGGGTCTA	NA	False	NA	NA	False	NA	NA	NA	59329333	59297968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803
tx.2807	chr11	+	4241	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	31	87	31	7	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCACTTGGGAGGGTG	9512	False	NA	NA	False	NA	NA	NA	59340901	59349306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
tx.2808	chr11	+	5777	6	NNC	ENSMUSG00000036819.15	novel	4351	6	NA	NA	23	1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.0326036053925	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	9504	False	NA	NA	False	NA	NA	NA	59340893	59350714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_59341339_59341500_59341667_59344336_59344506_59344617_59344886_59345758_59345906_59346132
tx.2809	chr11	+	5704	6	FSM	ENSMUSG00000036819.15	ENSMUST00000045279.13	4315	6	29	-1418	29	1324	multi-exon	FALSE	canonical	0	0	junction_3	19.0326036053925	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	9510	False	NA	NA	False	NA	NA	NA	59340899	59350717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344653_59344886_59345758_59345906_59346132
tx.281	chr1	-	6094	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-27	-1850	intron_retention	FALSE	canonical	2	1032	junction_2	150.157661314426	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	55066580	55026181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
tx.2810	chr11	+	4409	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	34	-92	34	-2	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTATGTGGTTTTAA	9515	False	NA	NA	False	NA	NA	NA	59340904	59349391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
tx.2811	chr11	-	2855	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	-42	599	-42	-599	multi-exon	FALSE	canonical	2	7	junction_3	2.86744175568088	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGTCTGTAGCTATTT	NA	False	NA	NA	False	NA	NA	NA	59363342	59352621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
tx.2812	chr11	-	3658	10	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	32.4200821774878	67	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	NA	False	NA	NA	NA	59397067	59376345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
tx.2813	chr11	-	3664	10	FSM	ENSMUSG00000020472.15	ENSMUST00000013262.15	4064	10	400	0	-24	0	multi-exon	FALSE	canonical	3	74	junction_1	26.5236907846458	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	NA	False	NA	NA	NA	59397070	59376345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
tx.2814	chr11	-	3611	10	NIC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	43.6750062717741	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	NA	False	NA	NA	NA	59397064	59376345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394590_59394973_59395081_59396653_59396789_59396989
tx.2815	chr11	-	3577	9	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	257	-4	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	34.1282049777014	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGTTTTCTTCTATCC	NA	False	NA	NA	False	NA	NA	NA	59396789	59376349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653
tx.2816	chr11	+	1923	4	FSM	ENSMUSG00000072893.13	ENSMUST00000137442.8	1414	4	-506	-3	-15	3	multi-exon	FALSE	canonical	2	5	junction_3	2.94392028877595	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCATTGTGCAGTTATA	NA	False	NA	NA	False	NA	NA	NA	59396472	59400932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59397713_59398016_59398139_59398656_59398765_59400479
tx.2817	chr11	+	4155	24	FSM	ENSMUSG00000005417.18	ENSMUST00000116371.8	8766	24	-21	4632	-9	-1	multi-exon	TRUE	canonical	3	400	junction_2	48.3490381455828	768	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3564	False	NA	NA	False	NA	NA	NA	59553311	59667048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
tx.2818	chr11	+	6318	17	ISM	ENSMUSG00000005417.18	ENSMUST00000133861.8	4153	21	10036	384	-3132	-5	3prime_fragment	FALSE	canonical	3	402	junction_1	47.003324350518	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	NA	False	NA	NA	False	NA	NA	NA	59628542	59667044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
tx.2819	chr11	-	1792	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-38	-806	-35	0	multi-exon	FALSE	canonical	3	85	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCATGTCTACCTTA	NA	False	NA	NA	False	NA	NA	NA	59678506	59674722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59676052_59678043
tx.282	chr1	-	4281	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	58	1856	-29	-1852	multi-exon	TRUE	canonical	2	1032	junction_2	157.733865172392	2545	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTGTGTTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	55066582	55026183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
tx.2820	chr11	-	2921	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	174	342	82	40	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	443	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	59700668	59682575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
tx.2821	chr11	-	3200	13	NIC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-99	40	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	67.9384934252217	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	59700636	59682575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
tx.2822	chr11	-	3051	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	4	40	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	74.517848346703	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	59700838	59682575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700525
tx.2823	chr11	-	3208	14	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	8	40	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	92.1306635794925	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	59700834	59682575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
tx.2824	chr11	-	1637	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	4	5	4	-5	multi-exon	FALSE	canonical	3	608	junction_5	45.2577558304642	542	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATGTTAATGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	59730660	59708625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
tx.2825	chr11	+	1316	5	FSM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	45	junction_1	9.12414379544733	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	1709	False	NA	NA	False	NA	NA	NA	59738888	59767359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765494_59766630
tx.2826	chr11	+	1906	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	14	0	14	0	multi-exon	FALSE	canonical	3	425	junction_1	0	218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGGTTTGCCTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	59839045	59853031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59839305_59851384
tx.2827	chr11	-	979	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	-21	3	-13	-3	multi-exon	FALSE	canonical	3	19	junction_6	8.67307455417179	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTCTGGTCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	59937328	59861442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
tx.2828	chr11	+	7443	6	FSM	ENSMUSG00000062115.16	ENSMUST00000064190.13	7348	6	-93	-2	-93	0	multi-exon	FALSE	canonical	2	7	junction_1	5.67097875150313	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGCCTGTGGATGCC	NA	False	NA	NA	False	NA	NA	NA	59995745	60090023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_59996221_60031066_60031197_60075921_60081449_60084764_60084859_60088614_60088665_60088856
tx.2829	chr11	+	6974	5	FSM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	-53	0	-53	0	multi-exon	FALSE	canonical	3	11	junction_1	3.69966214673719	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGCCTGTGGATGCC	NA	False	NA	NA	False	NA	NA	NA	60066651	60090023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60066788_60075921_60081449_60084764_60084859_60088614_60088665_60088856
tx.283	chr1	-	2541	2	ISM	ENSMUSG00000025982.14	ENSMUST00000190175.2	3350	3	2956	0	2956	0	3prime_fragment	FALSE	canonical	3	1607	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCATAGTATACCAGT	160	False	NA	NA	False	NA	NA	NA	55027318	55024331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_55026652_55027097
tx.2830	chr11	+	7038	2	ISM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	-9	7156	-9	16	5prime_fragment	FALSE	canonical	3	11	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATGGAACCTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	60066695	60082867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_60066788_60075921
tx.2831	chr11	+	5740	4	ISM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	10315	0	10315	0	3prime_fragment	FALSE	canonical	3	16	junction_1	1.88561808316413	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGCCTGTGGATGCC	2586	False	NA	NA	False	NA	NA	NA	60077019	60090023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_60081449_60084764_60084859_60088614_60088665_60088856
tx.2832	chr11	+	6357	3	ISM	ENSMUSG00000062115.16	ENSMUST00000149770.8	1823	5	83880	0	13014	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGCCTGTGGATGCC	5285	False	NA	NA	False	NA	NA	NA	60079718	60090023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_60084859_60088614_60088665_60088856
tx.2833	chr11	-	3597	18	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	13389	508	-27	-508	3prime_fragment	FALSE	canonical	3	300	junction_15	52.3111531836648	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	8493	False	NA	NA	False	NA	NA	NA	60098041	60090422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663
tx.2834	chr11	-	3710	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-508	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5287	False	NA	NA	False	NA	NA	NA	60101247	60090422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
tx.2835	chr11	-	3725	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-508	combination_of_known_junctions	FALSE	canonical	3	238	junction_18	63.0911793643156	253	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5287	False	NA	NA	False	NA	NA	NA	60101247	60090422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
tx.2836	chr11	-	3791	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	0	508	0	-508	multi-exon	FALSE	canonical	3	238	junction_18	63.0911793643156	334	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3801	False	NA	NA	False	NA	NA	NA	60111430	60090422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
tx.2837	chr11	-	3777	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-1	-508	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3800	False	NA	NA	False	NA	NA	NA	60111431	60090422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60111278
tx.2838	chr11	-	3908	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-210	-508	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	97.6774106086452	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	1614	False	NA	NA	False	NA	NA	NA	60113617	60090422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
tx.2839	chr11	-	4996	15	FSM	ENSMUSG00000000538.19	ENSMUST00000102683.11	4999	15	3	0	3	0	multi-exon	FALSE	canonical	3	31	junction_8	7.39553091745416	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	NA	False	NA	NA	NA	60243728	60117540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
tx.284	chr1	+	1681	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	50	2	-49	-2	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGGTTATTTAAATCT	3609	False	NA	NA	False	NA	NA	NA	55091978	55111859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
tx.2840	chr11	-	1826	8	FSM	ENSMUSG00000042709.16	ENSMUST00000145532.9	949	8	-29	-848	4	-4	multi-exon	FALSE	canonical	3	57	junction_4	104.174892192242	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATCTTTGGTCTAAGC	NA	False	NA	NA	False	NA	NA	NA	60307873	60291455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307576
tx.2841	chr11	-	1636	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	131.387249666777	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATCTTTGGTCTAAGC	NA	False	NA	NA	False	NA	NA	NA	60307876	60291455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
tx.2842	chr11	-	1800	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	1	12	1	0	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	NA	False	NA	NA	NA	60307876	60291463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
tx.2843	chr11	-	3688	7	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	57	junction_4	110.501005525842	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	NA	False	NA	NA	NA	60307875	60291463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60300232_60300411_60300457_60307576
tx.2844	chr11	-	1565	8	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	105.029830553622	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	NA	False	NA	NA	NA	60307876	60291463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307811
tx.2845	chr11	+	4266	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	15	2	15	-2	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	814	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCCAATTTGTAAGTCA	NA	False	NA	NA	False	NA	NA	NA	60308102	60336101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
tx.2846	chr11	+	1774	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	12	2	12	-2	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	376	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGGGAACTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	60345428	60359578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
tx.2847	chr11	+	6008	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	-281	3	-281	-3	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	430	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCACCTGTTTGAGTT	NA	False	NA	NA	False	NA	NA	NA	60428522	60449335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
tx.2848	chr11	+	180	2	Antisense	novelGene_ENSMUSG00000093978.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	120	junction_1	0	18	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGGCAGAGGCTG	4091	False	NA	NA	False	NA	NA	NA	60458713	60566997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_+_60458766_60566869
tx.2849	chr11	+	4406	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	-141	3	-19	-3	multi-exon	FALSE	canonical	3	223	junction_6	33.7192452465947	523	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATCTGCACACATGTGG	NA	False	NA	NA	False	NA	NA	NA	60590529	60605009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
tx.285	chr1	-	2255	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	168	0	168	0	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	7833	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4623	False	NA	NA	False	NA	NA	NA	55127015	55116993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
tx.2850	chr11	+	4324	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	-23	2	-23	-2	multi-exon	FALSE	canonical	3	67	junction_21	57.9955428735457	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCTGCACACATGTGGA	NA	False	NA	NA	False	NA	NA	NA	60590525	60605010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
tx.2851	chr11	-	4047	30	FSM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	13	0	13	0	multi-exon	TRUE	canonical	3	227	junction_19	35.2603363548522	454	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	NA	NA	NA	60618076	60604968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
tx.2852	chr11	-	4056	30	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_19	52.3939163762945	210	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	NA	NA	NA	60618088	60604968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611321_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
tx.2853	chr11	+	2585	4	NIC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	59.6713219785406	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	60619207	60623777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_60619394_60621108_60621262_60621408_60621619_60621741
tx.2854	chr11	+	2727	3	FSM	ENSMUSG00000018599.6	ENSMUST00000154890.2	716	3	-56	-1955	-11	0	multi-exon	FALSE	canonical	3	114	junction_2	20.5	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	60619212	60623777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60619394_60621108_60621619_60621741
tx.2855	chr11	+	2525	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	60619220	60623777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
tx.2856	chr11	-	5473	19	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	-5	1869	intron_retention	FALSE	canonical	2	3	junction_14	39.8550227638396	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	60668096	60629014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650164_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
tx.2857	chr11	-	3547	18	FSM	ENSMUSG00000002814.16	ENSMUST00000102668.10	3542	18	-7	2	-7	-2	multi-exon	FALSE	canonical	3	121	junction_7	18.3744218184581	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCTAAGTAGATCTTT	NA	False	NA	NA	False	NA	NA	NA	60668098	60632718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
tx.2858	chr11	-	3687	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	93	-39	-7	39	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGGCCAAGGGACCTC	NA	False	NA	NA	False	NA	NA	NA	60668098	60630844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
tx.2859	chr11	-	4115	20	NIC	ENSMUSG00000002814.16	novel	2932	20	NA	NA	2	557	combination_of_known_junctions	FALSE	canonical	2	18	junction_19	35.8833907056155	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCCTTCCATTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	60668123	60630326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
tx.286	chr1	-	2396	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	339	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4272	False	NA	NA	False	NA	NA	NA	55127366	55116993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
tx.2860	chr11	+	7379	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	9	3	9	-3	multi-exon	FALSE	canonical	3	54	junction_1	0	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGGTTCCTAATTGT	NA	False	NA	NA	False	NA	NA	NA	60668359	60679110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60671208_60674579
tx.2861	chr11	+	8264	2	NNC	ENSMUSG00000049323.9	novel	7391	2	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGGTTCCTAATTGT	NA	False	NA	NA	False	NA	NA	NA	60668363	60679110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_60672097_60674579
tx.2862	chr11	-	2786	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	64	8	64	-8	multi-exon	TRUE	canonical	3	983	junction_2	78.1211180853749	1477	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTACACTCCTCATAT	NA	False	NA	NA	False	NA	NA	NA	60702027	60678937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
tx.2863	chr11	+	1241	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	38	274	-10	-274	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATGTACAGGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	60721494	60748975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
tx.2864	chr11	+	1257	7	NNC	ENSMUSG00000042569.14	novel	3277	7	NA	NA	0	-277	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	85.6536955160462	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	NA	False	NA	NA	NA	60721504	60748972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_60721587_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
tx.2865	chr11	-	970	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	487	0	2	0	multi-exon	FALSE	canonical	3	675	junction_1	0	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7836	False	NA	NA	False	NA	NA	NA	60769611	60755277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60756175_60769538
tx.2866	chr11	-	1259	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	252	0	1	0	multi-exon	FALSE	canonical	3	26	junction_1	10	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7835	False	NA	NA	False	NA	NA	NA	60769612	60755277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60756175_60766585_60766874_60769538
tx.2867	chr11	-	3340	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	29	810	29	-810	multi-exon	TRUE	canonical	3	156	junction_2	31	386	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTCTGCTTTTCTCT	6653	False	NA	NA	False	NA	NA	NA	60804609	60793881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_60796948_60797707_60797827_60804454
tx.2868	chr11	+	2178	12	FSM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	5	15	5	2	multi-exon	FALSE	canonical	3	361	junction_6	27.3405217988137	599	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822863	60843622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
tx.2869	chr11	+	2126	11	FSM	ENSMUSG00000018932.10	ENSMUST00000130269.2	2096	11	-28	-2	5	2	multi-exon	FALSE	canonical	2	10	junction_6	128.562980674843	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822863	60843622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
tx.287	chr1	+	605	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	169	0	-13	0	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	1086	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACAGTCTTTGGTAATT	NA	False	NA	NA	False	NA	NA	NA	55127459	55130466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
tx.2870	chr11	+	4727	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-300	-2136	-300	2136	multi-exon	FALSE	canonical	3	70	junction_1	0	141	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTGTGTTGAGATG	NA	False	NA	NA	False	NA	NA	NA	60913089	60964093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_60913677_60959953
tx.2871	chr11	+	2197	3	FSM	ENSMUSG00000010142.13	ENSMUST00000137832.8	764	3	-3	-1430	-3	-9	multi-exon	FALSE	canonical	1	2	junction_1	4.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTTGCATACAGTATGC	NA	False	NA	NA	False	NA	NA	NA	61033283	61040189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_61033356_61037666_61037844_61038241
tx.2872	chr11	-	4424	13	FSM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	10	0	10	0	multi-exon	FALSE	canonical	3	276	junction_4	25.4114748795806	592	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	False	NA	NA	False	NA	NA	NA	61065871	61042610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
tx.2873	chr11	-	3188	11	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	38.2758409443868	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTGTGTTAATTTTGA	1349	False	NA	NA	False	NA	NA	NA	61157995	61135678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61137148_61138754_61138868_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
tx.2874	chr11	-	3059	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	32	0	-26	0	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTGTGTTAATTTTGA	1365	False	NA	NA	False	NA	NA	NA	61157979	61135678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
tx.2875	chr11	-	2666	17	FSM	ENSMUSG00000010122.15	ENSMUST00000010267.10	2639	17	-26	-1	-26	1	multi-exon	FALSE	canonical	2	6	junction_16	9.25675429078681	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTGTAGATTATTAT	NA	False	NA	NA	False	NA	NA	NA	61268933	61234225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254219_61254318_61258498_61258544_61260076_61260120_61260943_61261093_61262581_61262651_61264180_61264283_61268738
tx.2876	chr11	-	3079	7	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	28	-5	intron_retention	FALSE	canonical	3	42	junction_5	71.8410668690888	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385064	61379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384349_61384781_61384905
tx.2877	chr11	-	3092	7	NIC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	33	-5	intron_retention	FALSE	canonical	3	31	junction_5	75.7840499196382	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385059	61379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384331_61384781_61384905
tx.2878	chr11	-	3082	6	ISM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	57	5	27	-5	intron_retention	FALSE	canonical	3	175	junction_5	27.8107892732299	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385065	61379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472
tx.2879	chr11	-	2960	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	54	5	24	-5	multi-exon	FALSE	canonical	3	175	junction_5	27.9861076647365	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385068	61379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
tx.288	chr1	+	2741	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	46	53	-5	-52	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	327	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCACCCTCCCTGTAGT	NA	False	NA	NA	False	NA	NA	NA	55170435	55194005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
tx.2880	chr11	-	3661	5	ISM	ENSMUSG00000001034.18	ENSMUST00000152755.8	3255	6	25	5	25	-5	intron_retention	FALSE	canonical	3	217	junction_3	15.1224171348366	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385067	61379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729
tx.2881	chr11	-	3014	7	FSM	ENSMUSG00000001034.18	ENSMUST00000108714.2	3069	7	50	5	20	-5	multi-exon	FALSE	canonical	3	31	junction_5	75.7840499196382	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385072	61379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384422_61384781_61384905
tx.2882	chr11	-	2945	7	NNC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	18	-5	intron_retention	FALSE	canonical	3	23	junction_6	78.9523414613032	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385074	61379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384760_61384905
tx.2883	chr11	-	2996	7	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-36	-5	intron_retention	FALSE	canonical	3	13	junction_4	77.5234731477434	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385050	61379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383675_61383896_61384472_61384781_61384905
tx.2884	chr11	+	779	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	35	3	-24	-3	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTGGGGCCTTCATTTC	NA	False	NA	NA	False	NA	NA	NA	61396004	61403754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
tx.2885	chr11	-	4380	12	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	139.344866197278	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	61470506	61408074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61444335_61444406_61456647_61456721_61470392
tx.2886	chr11	-	3439	8	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	109.403204818185	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	61470506	61408075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61470392
tx.2887	chr11	-	4378	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	123.776780367017	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	61470512	61408075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61470392
tx.2888	chr11	-	4207	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	-1	1	-1	0	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	385	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	61470512	61408075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
tx.2889	chr11	-	4243	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	-1	1	-1	0	multi-exon	FALSE	canonical	3	47	junction_6	113.072029921715	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	61470512	61408075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
tx.289	chr1	-	5236	11	NIC	ENSMUSG00000025977.16	novel	882	10	NA	NA	-70	3995	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	8.86848352312841	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATTCTCTAGCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	55402548	55283821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_55288124_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55402457
tx.2890	chr11	-	4354	11	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	134.892883429779	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	61470515	61408074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61456647_61456721_61470392
tx.2891	chr11	-	4231	10	NIC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	124.448115025232	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	61470500	61408074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61470392
tx.2892	chr11	-	3987	8	ISM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	32874	1	-269	0	3prime_fragment	FALSE	canonical	3	259	junction_6	31.4726962976625	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	61437637	61408075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975
tx.2893	chr11	-	4280	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	118.026780806961	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	61470512	61408075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61456647_61456721_61470392
tx.2894	chr11	-	4280	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_9	124.703302202656	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	61470515	61408075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61470392
tx.2895	chr11	+	4763	5	FSM	ENSMUSG00000042377.9	ENSMUST00000093019.6	4778	5	6	9	6	-9	multi-exon	FALSE	canonical	3	16	junction_3	2.38484800354236	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGAGAGCAGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	61575250	61600768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
tx.2896	chr11	-	1847	12	FSM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	-10	0	-10	0	multi-exon	FALSE	canonical	3	105	junction_11	44.7137821487915	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	232	False	NA	NA	False	NA	NA	NA	61652898	61620479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652779
tx.2897	chr11	-	5758	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	-16	1	-16	-1	multi-exon	TRUE	canonical	3	9	junction_8	4.53666848543571	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTTCATATCATGT	NA	False	NA	NA	False	NA	NA	NA	61745915	61666475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
tx.2898	chr11	-	3484	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	25	365	-1	0	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	61821053	61762497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
tx.2899	chr11	-	3275	13	NIC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	44.4669040473424	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	61821053	61762497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
tx.29	chr1	+	2552	15	FSM	ENSMUSG00000046101.17	ENSMUST00000171802.8	2553	15	-1	2	-1	-2	multi-exon	FALSE	canonical	2	3	junction_12	9.43857694220254	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTGGTAAATGTATGA	NA	False	NA	NA	False	NA	NA	NA	9978861	10011177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602
tx.290	chr1	-	1005	3	ISM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	-19	2968	-19	-2968	5prime_fragment	FALSE	canonical	3	59	junction_2	8.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGGCTACACAATGCT	NA	False	NA	NA	False	NA	NA	NA	57416722	57401348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_57401923_57414406_57414679_57416563
tx.2900	chr11	+	5932	6	NIC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	7.07106781186548	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATTGGATATTTTA	NA	False	NA	NA	False	NA	NA	NA	61967848	62032549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
tx.2901	chr11	+	1864	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	17	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCACTGGCTTCTTGCA	8704	False	NA	NA	False	NA	NA	NA	62139790	62157279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62140263_62155887
tx.2902	chr11	-	613	3	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	132	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	NA	False	NA	NA	NA	62172207	62158049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_62158433_62159529_62159635_62172082
tx.2903	chr11	-	745	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	-13	0	-13	0	multi-exon	TRUE	canonical	3	218	junction_4	57.8986182909402	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	NA	False	NA	NA	NA	62172214	62158049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
tx.2904	chr11	+	3395	9	FSM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	-32	-1170	-23	-10	multi-exon	FALSE	canonical	3	16	junction_3	62.3493183603478	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTTAAGATCTCAAAT	NA	False	NA	NA	False	NA	NA	NA	62172275	62207242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
tx.2905	chr11	+	5147	9	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-24	-6	intron_retention	FALSE	canonical	3	154	junction_3	25.45308183698	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGATCTCAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	62172274	62207246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
tx.2906	chr11	+	3438	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-34	6	-23	-6	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGATCTCAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	62172275	62207246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
tx.2907	chr11	+	3342	9	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-22	-6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	60.8973265012513	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGATCTCAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	62172276	62207246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62199867_62200020_62203841_62204005_62204835
tx.2908	chr11	-	3186	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	-3	-12	-3	12	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTAAGTGGTTTGCC	NA	False	NA	NA	False	NA	NA	NA	62348152	62292196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
tx.2909	chr11	+	1675	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	-14	513	-14	-513	multi-exon	TRUE	canonical	3	156	junction_1	58.9736287580211	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	NA	False	NA	NA	NA	62349271	62404730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
tx.291	chr1	+	3119	3	NIC	ENSMUSG00000038323.4	novel	541	3	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	2.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGGATGTGTTTAT	10022	False	NA	NA	False	NA	NA	NA	57416773	57424582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_57417106_57418865_57418972_57421901
tx.2910	chr11	+	1580	2	ISM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	53233	513	53085	-513	3prime_fragment	FALSE	canonical	3	316	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	NA	False	NA	NA	NA	62402518	62404730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_62403098_62403729
tx.2911	chr11	-	1013	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	20	-1	20	1	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	654	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTATGACATATTTCTT	8391	False	NA	NA	False	NA	NA	NA	62430067	62415770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
tx.2912	chr11	+	1164	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	334	1	-171	-1	multi-exon	FALSE	canonical	3	35417	junction_1	0	15944	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	NA	False	NA	NA	NA	62442330	62444038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62442422_62442965
tx.2913	chr11	+	465	5	FSM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	3662	junction_1	404.852056311932	653	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	NA	NA	NA	62493701	62495635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495480
tx.2914	chr11	-	2047	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	-63	0	-63	0	multi-exon	FALSE	canonical	3	119	junction_3	14.7044966667419	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGACTGTGCTTTATTAG	5407	False	NA	NA	False	NA	NA	NA	62539412	62495709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
tx.2915	chr11	+	2218	2	FSM	ENSMUSG00000048497.12	ENSMUST00000155759.3	589	2	-511	-1118	-340	0	multi-exon	FALSE	canonical	3	16	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	62539149	62557180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62539683_62555495
tx.2916	chr11	-	5026	6	NIC	ENSMUSG00000005267.14	novel	1605	8	NA	NA	6	-221	intron_retention	FALSE	canonical	0	0	junction_5	1.16619037896906	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTCTGTGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	62622705	62602311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_62606203_62615622_62615710_62616073_62616201_62618375_62618480_62619107_62619712_62622492
tx.2917	chr11	-	4672	4	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	-111	1821	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	19.6185852927496	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTACTTAAGTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	62679917	62667391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755
tx.2918	chr11	-	3039	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	9	3	9	-3	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCGCAGGTTTTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	62680279	62669215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
tx.2919	chr11	-	2898	5	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	17.8535710713571	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCAGGTTTTTAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	62680250	62669212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755_62679916_62680201
tx.292	chr1	+	3294	4	NNC	ENSMUSG00000038323.4	novel	541	3	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.16024689946929	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTTATTTGGATGTGT	NA	False	NA	NA	False	NA	NA	NA	57416781	57424578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_57417106_57418865_57418972_57419200_57419388_57421901
tx.2920	chr11	-	2797	4	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.3130005674953	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAATCGCAGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	62680247	62669220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_62671726_62678784_62678871_62679755_62679916_62680201
tx.2921	chr11	+	1850	2	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGGTGCTGCGTCTTT	NA	False	NA	NA	False	NA	NA	NA	62685585	62689374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_62685789_62687727
tx.2922	chr11	+	3903	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	3	0	3	0	multi-exon	TRUE	canonical	3	37	junction_4	2.33238075793812	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTGCTAGTATTTG	NA	False	NA	NA	False	NA	NA	NA	62711059	62733762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
tx.2923	chr11	+	3306	13	FSM	ENSMUSG00000090173.9	ENSMUST00000150989.8	3267	13	-37	-2	17	-1	multi-exon	FALSE	canonical	0	0	junction_8	1.80277563773199	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTGGTTGTCCAGA	NA	False	NA	NA	False	NA	NA	NA	62737911	62768290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62738622_62741397_62741569_62743780_62743982_62744090_62744219_62746111_62746235_62748511_62748622_62750665_62750867_62753455_62753578_62758346_62758496_62759837_62759981_62764196_62764356_62765767_62766016_62767449
tx.2924	chr11	+	1755	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	29	0	-6	0	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	353	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9270	False	NA	NA	False	NA	NA	NA	62770309	62786011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
tx.2925	chr11	-	4917	2	FSM	ENSMUSG00000070407.6	ENSMUST00000094103.4	4911	2	-6	0	-6	0	multi-exon	FALSE	canonical	3	10	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGAGTATGTTCCTATT	NA	False	NA	NA	False	NA	NA	NA	63813122	63776617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_63780572_63812159
tx.2926	chr11	-	2919	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-4	0	-2	0	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	224	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCGTGTGTCCTGTGT	5003	False	NA	NA	False	NA	NA	NA	63970296	63853452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
tx.2927	chr11	+	2915	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	-26	-5	10	5	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	359	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTGGGGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	64869873	64892431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
tx.2928	chr11	+	2762	25	FSM	ENSMUSG00000020549.15	ENSMUST00000071891.12	2771	25	10	-1	10	1	multi-exon	FALSE	canonical	3	56	junction_24	61.5767221304718	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACAACAGTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	64869873	64892896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820_64892040_64892657
tx.2929	chr11	-	4067	21	FSM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	7	0	7	0	multi-exon	FALSE	canonical	3	13	junction_17	3.6779749863206	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCACATGGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	65053780	64892864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
tx.293	chr1	+	3004	2	FSM	ENSMUSG00000038323.4	ENSMUST00000042734.3	3008	2	4	0	4	0	multi-exon	FALSE	canonical	3	44	junction_1	0	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGGATGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	57416782	57424582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_57417106_57421901
tx.2930	chr11	-	2132	16	ISM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	5	19611	5	-19609	5prime_fragment	FALSE	canonical	3	13	junction_12	3.56775684273591	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAATTTTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	65053782	64912475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
tx.2931	chr11	-	3682	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	-13	26	-13	-26	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	375	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACAGGAGAGTTATCTC	NA	False	NA	NA	False	NA	NA	NA	65679136	65579094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
tx.2932	chr11	-	3712	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-12	-28	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATACAGGAGAGTTATC	NA	False	NA	NA	False	NA	NA	NA	65679135	65579096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
tx.2933	chr11	-	3506	10	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-11	-25	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	72.4284235863924	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGGAGAGTTATCTCC	NA	False	NA	NA	False	NA	NA	NA	65679134	65579093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65678961
tx.2934	chr11	+	2260	7	NNC	ENSMUSG00000018347.17	novel	2270	7	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_5	10.077477638554	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTGTAGCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	65698007	65720064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713653_65713765_65718867
tx.2935	chr11	+	2248	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	23	-1	23	0	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTGTAGCTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	65698023	65720065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
tx.2936	chr11	+	4191	2	FSM	ENSMUSG00000048070.5	ENSMUST00000123434.3	4200	2	10	-1	10	1	multi-exon	FALSE	canonical	3	13	junction_1	0	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTCAGAAGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	66802816	66820703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_66802969_66816664
tx.2937	chr11	+	1834	2	ISM	ENSMUSG00000050270.13	ENSMUST00000079077.12	1147	7	-6	7172	-6	-7172	intron_retention	FALSE	canonical	3	21	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGGTCACTTGGTGG	3912	False	NA	NA	False	NA	NA	NA	66915973	66918444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_66916098_66916734
tx.2938	chr11	-	1299	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	-24	8	0	-8	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTAAGTATTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	66943420	66928874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
tx.2939	chr11	-	2442	4	NIC	ENSMUSG00000020910.17	novel	1531	5	NA	NA	-3	-13	intron_retention	FALSE	canonical	3	79	junction_3	12.2474487139159	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	NA	False	NA	NA	NA	66943423	66928879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_66929272_66931044_66932934_66942506_66942605_66943360
tx.294	chr1	+	3186	3	NNC	ENSMUSG00000038323.4	novel	541	3	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTTATTTGGATGTG	NA	False	NA	NA	False	NA	NA	NA	57416782	57424577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_57417106_57419200_57419388_57421901
tx.2940	chr11	+	1774	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	-20	658	-20	-417	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	247	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTGCTTCTGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	66943475	66955740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
tx.2941	chr11	+	3656	15	NIC	ENSMUSG00000020908.15	novel	6031	41	NA	NA	15122	0	intron_retention	FALSE	canonical	2	13	junction_2	5.09351328171631	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGTTTTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	66984247	66993112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
tx.2942	chr11	+	2845	17	ISM	ENSMUSG00000020908.15	ENSMUST00000108689.8	6031	41	15137	0	15137	0	3prime_fragment	FALSE	canonical	2	11	junction_1	5.51949669354009	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGTTTTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	66984262	66993112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
tx.2943	chr11	+	4013	25	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17698	-86	17698	2	3prime_fragment	FALSE	canonical	3	52	junction_14	14.9210887300119	142	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGCTCTGCTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	67235626	67262414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
tx.2944	chr11	+	4227	14	FSM	ENSMUSG00000033066.18	ENSMUST00000108681.9	1941	14	-10	-2276	-10	762	multi-exon	FALSE	canonical	1	4	junction_8	3.36357093985776	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAAGATTCCAGTCTCC	1113	False	NA	NA	False	NA	NA	NA	67345906	67576562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
tx.2945	chr11	-	4328	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-35	169	-35	-169	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCGGACTGAATTACT	NA	False	NA	NA	False	NA	NA	NA	67813014	67745517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
tx.2946	chr11	-	4306	15	FSM	ENSMUSG00000020905.12	ENSMUST00000108677.2	4447	15	-25	166	-25	-166	multi-exon	FALSE	canonical	1	2	junction_3	6.60086574408453	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCGGACTGAATTACTGAA	NA	False	NA	NA	False	NA	NA	NA	67813004	67745514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770636_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
tx.2947	chr11	+	1648	5	FSM	ENSMUSG00000020903.14	ENSMUST00000021286.11	1638	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	5	junction_4	126.986957991756	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGAGTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	67857284	67878433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67877150
tx.2948	chr11	+	856	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	270	3268	-6	110	multi-exon	FALSE	canonical	3	260	junction_1	20.1626043021455	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTACCTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	67857288	68094706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
tx.2949	chr11	-	5393	6	ISM	ENSMUSG00000020902.13	ENSMUST00000021284.4	5738	7	765	5	765	-5	3prime_fragment	FALSE	canonical	3	78	junction_5	11.5827457884562	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCCAGCCTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	68276887	68100194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928
tx.295	chr1	-	1449	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	396	2	-31	1	multi-exon	FALSE	canonical	3	47	junction_6	29.7341966257639	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTGGTGGAGTGGCCGT	NA	False	NA	NA	False	NA	NA	NA	57445864	57427397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
tx.2950	chr11	-	5892	7	FSM	ENSMUSG00000020902.13	ENSMUST00000021284.4	5738	7	-161	7	25	-7	multi-exon	FALSE	canonical	3	78	junction_5	10.7922297150414	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCCCAGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	68277813	68100196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68277435
tx.2951	chr11	-	5956	7	ISM	ENSMUSG00000020902.13	ENSMUST00000108674.9	5874	8	-2	6	-2	-6	intron_retention	TRUE	canonical	0	0	junction_6	36.3073301445069	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCCAGCCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	68291651	68100195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68291210
tx.2952	chr11	+	7617	41	FSM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	165	9	-1	-1	multi-exon	TRUE	canonical	3	123	junction_6	27.8530855561821	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGGACTCTGCTTCCG	NA	False	NA	NA	False	NA	NA	NA	68582905	68707449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
tx.2953	chr11	+	552	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	-25	-1	-25	1	multi-exon	FALSE	canonical	3	13360	junction_1	1585.12172683642	1608	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTTGTGTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	68792383	68795361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
tx.2954	chr11	-	4375	16	ISM	ENSMUSG00000052921.14	ENSMUST00000108671.2	4372	17	383	-3	383	1	3prime_fragment	FALSE	canonical	2	6	junction_4	2.81582827759238	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTCTAAAAACACAGTTT	6368	False	NA	NA	False	NA	NA	NA	68847923	68833979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671
tx.2955	chr11	-	4387	17	FSM	ENSMUSG00000052921.14	ENSMUST00000108671.2	4372	17	-12	-3	-12	1	multi-exon	FALSE	canonical	2	6	junction_4	3.00974978195863	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTCTAAAAACACAGTTT	5973	False	NA	NA	False	NA	NA	NA	68848318	68833979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
tx.2956	chr11	+	1818	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	10	0	-6	0	multi-exon	FALSE	canonical	3	33	junction_2	4.96865172858795	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTGTCTTATGTTTA	5568	False	NA	NA	False	NA	NA	NA	68858966	68863342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
tx.2958	chr11	-	2864	2	ISM	ENSMUSG00000020899.17	ENSMUST00000146490.2	2584	5	1953	-763	1953	0	3prime_fragment	FALSE	canonical	3	560	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	NA	False	NA	NA	NA	68879479	68876522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_68879100_68879192
tx.2959	chr11	-	6314	27	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	4586	3	4577	0	3prime_fragment	FALSE	canonical	3	385	junction_15	38.4410137543424	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	NA	False	NA	NA	NA	68894700	68876525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
tx.296	chr1	-	1195	8	FSM	ENSMUSG00000048495.17	ENSMUST00000079998.13	1398	8	198	5	-5	-5	multi-exon	FALSE	canonical	3	102	junction_6	15.7025930524684	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTATTGGTGGAGT	NA	False	NA	NA	False	NA	NA	NA	57445635	57427403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
tx.2960	chr11	-	6369	28	FSM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	1	3	1	0	multi-exon	FALSE	canonical	3	373	junction_27	41.3360546031052	275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	NA	False	NA	NA	NA	68899285	68876525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
tx.2961	chr11	+	3974	23	FSM	ENSMUSG00000020898.19	ENSMUST00000021278.14	4164	23	187	3	1	0	multi-exon	FALSE	canonical	3	209	junction_14	54.4241833704208	287	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5273	False	NA	NA	False	NA	NA	NA	68906923	68927296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
tx.2962	chr11	+	3977	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	1	0	1	0	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	352	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5273	False	NA	NA	False	NA	NA	NA	68906923	68927296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
tx.2963	chr11	+	1950	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	466	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	NA	False	NA	NA	NA	68936477	68942490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
tx.2964	chr11	+	3704	7	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	589	junction_2	30.4630924234556	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	NA	False	NA	NA	NA	68936497	68942488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
tx.2965	chr11	+	779	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4647	False	NA	NA	False	NA	NA	NA	68961631	68963856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
tx.2966	chr11	+	3326	3	NIC	ENSMUSG00000020894.17	novel	1113	4	NA	NA	4	-1	intron_retention	FALSE	canonical	3	124	junction_1	2	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCCAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	68979319	68983209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_68979454_68979931_68980716_68980801
tx.2967	chr11	+	2182	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	22	1	2	-1	multi-exon	FALSE	canonical	3	85	junction_4	21.4126131053639	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCCAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	68979337	68983209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
tx.2968	chr11	+	2790	4	FSM	ENSMUSG00000020894.17	ENSMUST00000117780.2	1113	4	17	-1694	5	0	multi-exon	FALSE	canonical	3	124	junction_1	8.17856276425687	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	68979352	68983210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801
tx.2969	chr11	+	3330	18	FSM	ENSMUSG00000020893.18	ENSMUST00000101004.9	3507	18	13	164	13	-2	multi-exon	FALSE	canonical	3	14	junction_5	5.21177798431451	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGATTCTTCCCCG	NA	False	NA	NA	False	NA	NA	NA	68986055	68997120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_68986130_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
tx.297	chr1	+	1216	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	278	2046	-153	-2046	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGTGTTCTTTAAAGG	NA	False	NA	NA	False	NA	NA	NA	57445764	57455066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
tx.2970	chr11	-	3917	19	FSM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	-65	9	-65	-9	multi-exon	TRUE	canonical	3	88	junction_15	16.162847964421	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTTTAATGTTTAAG	NA	False	NA	NA	False	NA	NA	NA	69214666	69190321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
tx.2971	chr11	+	753	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	239	junction_1	97.8682149627753	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	69214803	69216619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
tx.2972	chr11	+	746	4	FSM	ENSMUSG00000049299.15	ENSMUST00000102601.10	759	4	13	0	1	0	multi-exon	FALSE	canonical	3	452	junction_2	10.7082522694727	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	69214901	69216619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216264
tx.2973	chr11	+	2525	14	FSM	ENSMUSG00000018470.9	ENSMUST00000018614.3	2538	14	7	6	7	-6	multi-exon	FALSE	canonical	3	22	junction_1	7.85293824331087	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGACCACGTCTGAA	NA	False	NA	NA	False	NA	NA	NA	69217090	69223862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
tx.2974	chr11	+	1284	3	ISM	ENSMUSG00000018470.9	ENSMUST00000134561.2	750	7	1038	-898	1038	-1	3prime_fragment	FALSE	canonical	3	49	junction_1	1	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACCACGTCTGAAATTGC	NA	False	NA	NA	False	NA	NA	NA	69222187	69223867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_69222407_69222561_69222651_69222891
tx.2975	chr11	+	1772	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	309	0	-1	0	multi-exon	FALSE	canonical	3	42	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGACTGTTATTG	NA	False	NA	NA	False	NA	NA	NA	69231595	69233467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69231885_69231984
tx.2976	chr11	-	7292	40	NIC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_39	13.6765971522413	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	69260235	69234098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237397_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69259961
tx.2977	chr11	-	3772	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-339	-2680	-41	993	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTAGTGGGTCTGATG	NA	False	NA	NA	False	NA	NA	NA	69286498	69281757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
tx.2978	chr11	+	527	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	141	3	-26	-3	multi-exon	FALSE	canonical	3	948	junction_1	166	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTGTGTCTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	69286613	69287503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69286799_69287002_69287187_69287345
tx.2979	chr11	+	391	2	FSM	ENSMUSG00000059278.10	ENSMUST00000124932.2	404	2	10	3	10	-3	multi-exon	FALSE	canonical	3	1280	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTGTGTCTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	69286953	69287503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69287187_69287345
tx.298	chr1	+	2549	14	NIC	ENSMUSG00000038305.16	novel	2315	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	18.2941126107012	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTTGCTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	57813746	57986123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_57813961_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
tx.2980	chr11	-	4078	13	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	8375	27	-1085	-27	3prime_fragment	FALSE	canonical	3	11	junction_5	5.70270403697521	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAGCAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	69296126	69289360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831
tx.2981	chr11	-	2824	6	NIC	ENSMUSG00000005237.15	novel	13704	86	NA	NA	-12145	-7722	intron_retention	FALSE	canonical	1	1	junction_5	1.4142135623731	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCCTTTTTTATTACAT	1501	False	NA	NA	False	NA	NA	NA	69368665	69363157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_69364304_69364545_69364699_69365025_69365154_69366291_69366473_69367153_69368175_69368470
tx.2982	chr11	-	3179	5	FSM	ENSMUSG00000003934.6	ENSMUST00000004036.6	3183	5	2	2	2	-2	multi-exon	FALSE	canonical	3	7	junction_4	2.17944947177034	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAGAAGGCTGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	69451029	69444919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69447096_69447518_69447624_69447731_69447825_69448025_69448319_69450517
tx.2983	chr11	-	7101	4	ISM	ENSMUSG00000041346.12_ENSMUSG00000003934.6	ENSMUST00000004036.6	3183	5	-1719	0	-1719	0	intron_retention	FALSE	canonical	3	9	junction_2	1.88561808316413	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAGGCTGGAAAATGAC	NA	False	NA	NA	False	NA	NA	NA	69452750	69444917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_69447096_69447518_69447624_69447731_69447825_69448025
tx.2984	chr11	-	1857	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	35	-1	35	0	multi-exon	FALSE	canonical	3	103	junction_6	29.7960143162773	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTCATTGTGTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	69470115	69452583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
tx.2985	chr11	+	1732	11	FSM	ENSMUSG00000059552.14	ENSMUST00000005371.12	1772	11	40	0	-3	0	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	1911	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	69471224	69482699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
tx.2986	chr11	-	2983	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	-134	-7	-21	7	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	384	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGTGTGTGCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	69496789	69490554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
tx.2987	chr11	+	2990	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	-39	0	-39	0	multi-exon	FALSE	canonical	3	970	junction_6	95.5459436279217	1770	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	NA	False	NA	NA	NA	69523776	69544123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
tx.2988	chr11	+	1169	2	FSM	ENSMUSG00000041287.6	ENSMUST00000047373.6	861	2	-310	2	-310	-2	multi-exon	FALSE	canonical	3	116	junction_1	0	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTGTCCCATTTGT	NA	False	NA	NA	False	NA	NA	NA	69545829	69547551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69546726_69547278
tx.2989	chr11	-	1275	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	41	5	-14	-5	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	364	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6802	False	NA	NA	False	NA	NA	NA	69553427	69547527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
tx.299	chr1	+	2522	14	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	8.58855713199065	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	57813994	57986124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
tx.2990	chr11	-	1310	7	FSM	ENSMUSG00000018761.15	ENSMUST00000148242.8	971	7	-15	-324	-15	-6	multi-exon	FALSE	canonical	3	35	junction_4	228.446018423026	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTGTGTTTAGTGTG	6801	False	NA	NA	False	NA	NA	NA	69553428	69547528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548883_69549391_69549525_69549636_69549703_69553294
tx.2991	chr11	-	1273	6	FSM	ENSMUSG00000018774.14	ENSMUST00000018918.12	1230	6	-44	1	-44	-1	multi-exon	FALSE	canonical	3	102	junction_5	17.4653943556966	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTTCTTTCCTCATTA	3206	False	NA	NA	False	NA	NA	NA	69557023	69555039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845
tx.2992	chr11	-	1773	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	0	1	0	0	multi-exon	TRUE	canonical	3	9657	junction_10	1402.57834362292	7176	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	69563143	69557762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
tx.2993	chr11	-	2381	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-68	0	-68	0	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	1088	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8462	False	NA	NA	False	NA	NA	NA	69572740	69563940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
tx.2994	chr11	-	6739	29	FSM	ENSMUSG00000005198.16	ENSMUST00000058470.16	6740	29	1	0	1	0	multi-exon	FALSE	canonical	2	202	junction_15	57.5883527056204	389	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	NA	False	NA	NA	NA	69649462	69624822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
tx.2995	chr11	-	2183	11	FSM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	-32	4	-32	-4	multi-exon	FALSE	canonical	2	3	junction_10	6.56429737291052	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTTTTGTCTATTT	9279	False	NA	93	True	NA	NA	NA	69686801	69674865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69675588_69675875_69676024_69676532_69676706_69677706_69677931_69683524_69683735_69684290_69684439_69684709_69684819_69684975_69685086_69685794_69685840_69686420_69686561_69686647
tx.2996	chr11	-	4013	5	NIC	ENSMUSG00000042826.14	novel	2534	6	NA	NA	-1053	0	intron_retention	FALSE	canonical	2	7	junction_2	2.8613807855649	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTATCTGACATTTGTGA	2344	False	NA	NA	False	NA	NA	NA	69693736	69686893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_69689099_69689389_69689505_69690177_69690282_69690491_69690603_69692258
tx.2997	chr11	-	2657	5	NNC	ENSMUSG00000042826.14	novel	3039	5	NA	NA	1764	-2	intron_retention	FALSE	canonical	1	1	junction_4	4.96865172858795	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGAGTGTTATCTGACA	5302	False	NA	NA	False	NA	NA	NA	69690778	69686900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_69689099_69689389_69689589_69690177_69690282_69690491_69690603_69690733
tx.2998	chr11	-	2593	5	NNC	ENSMUSG00000042826.14	novel	3039	5	NA	NA	1746	0	intron_retention	FALSE	canonical	1	1	junction_4	5.02493781056044	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAGTGTTATCTGACATT	5284	False	NA	NA	False	NA	NA	NA	69690796	69686898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_69689099_69689389_69689505_69690177_69690282_69690491_69690603_69690733
tx.2999	chr11	-	1983	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	-42	-8	-42	8	multi-exon	FALSE	canonical	3	73	junction_1	0	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAAGTGTTTCCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	69696492	69694420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69695757_69695845
tx.3	chr1	-	1009	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	28	3166	-1	0	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	658	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGCTCAGGTCTTTTG	1648	False	NA	NA	False	NA	NA	NA	4855934	4846599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
tx.30	chr1	-	1896	2	ISM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	33	64	18	0	intron_retention	TRUE	canonical	3	538	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	NA	False	NA	NA	NA	10014310	10012247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_10012381_10012547
tx.300	chr1	+	2520	14	FSM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	-20	1429	-20	0	multi-exon	FALSE	canonical	3	22	junction_13	12.6939392890685	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	57813999	57986124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
tx.3000	chr11	-	4598	7	FSM	ENSMUSG00000051790.16	ENSMUST00000056484.10	5003	7	404	1	-186	-1	multi-exon	FALSE	canonical	3	12	junction_1	3.14907393794853	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGTTGTCTCCTGTCG	9984	False	NA	NA	False	NA	NA	NA	69725271	69713948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69716906_69717569_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69721388_69721440_69724807
tx.3001	chr11	+	480	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	9	3	9	2	multi-exon	FALSE	canonical	3	1210	junction_1	145.470119115767	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGGTGTCTTTATTC	NA	False	NA	NA	False	NA	NA	NA	69729358	69730441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
tx.3002	chr11	+	404	4	FSM	ENSMUSG00000070394.11	ENSMUST00000133967.8	421	4	19	-2	9	2	multi-exon	FALSE	canonical	3	250	junction_1	597.808404832927	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGGTGTCTTTATTC	NA	False	NA	NA	False	NA	NA	NA	69729358	69730441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69729400_69729745_69729778_69730013_69730095_69730191
tx.3003	chr11	+	1979	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	-52	0	7	0	multi-exon	FALSE	canonical	3	67	junction_4	3.33749739908346	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGGATGTGATGGGA	NA	False	NA	NA	False	NA	NA	NA	69737449	69741869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
tx.3004	chr11	+	1871	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	6	908	6	107	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAAAAAGTTAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	69737448	69741976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
tx.3005	chr11	-	2819	14	FSM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	-42	1	-42	-1	multi-exon	FALSE	canonical	3	9	junction_11	5.7316726185222	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGACACAGCCTCCTT	9038	False	NA	NA	False	NA	NA	NA	69749598	69741831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
tx.3006	chr11	-	2482	22	FSM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	1	-1	1	1	multi-exon	TRUE	canonical	3	20	junction_20	9.40183800238705	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTAGTTCATTTAC	9574	False	NA	NA	False	NA	NA	NA	69786364	69772391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
tx.3007	chr11	-	2235	20	ISM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	4491	0	-557	0	3prime_fragment	FALSE	canonical	3	29	junction_17	7.4342920349514	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	NA	False	NA	NA	False	NA	NA	NA	69781874	69772392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689
tx.3008	chr11	-	2777	19	NIC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	-849	-1	intron_retention	FALSE	canonical	3	32	junction_13	6.62673224499931	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTCTTAGTTCATTT	NA	False	NA	NA	False	NA	NA	NA	69782166	69772393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781319_69781414_69781469_69781689
tx.3009	chr11	-	1609	9	NIC	ENSMUSG00000018570.18	novel	1640	9	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.70087712549569	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGGAGCTGCGTGTC	9769	False	NA	NA	False	NA	NA	NA	69791740	69788184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_69788319_69788436_69788581_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
tx.301	chr1	-	3202	7	NIC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	25.1859749331515	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGGTGGTTTAACTGA	NA	False	NA	NA	False	NA	NA	NA	58009220	57994263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58008565
tx.3010	chr11	+	5262	29	FSM	ENSMUSG00000047284.15	ENSMUST00000061837.11	5188	29	-74	0	1	0	multi-exon	TRUE	canonical	3	43	junction_8	16.6703864896494	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	69792642	69804646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
tx.3011	chr11	+	1180	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	-20	-1	-20	0	multi-exon	FALSE	canonical	3	122	junction_1	67.5763272159711	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4071	False	NA	NA	False	NA	NA	NA	69804855	69807417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
tx.3012	chr11	+	1380	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	-160	0	-18	0	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4073	False	NA	NA	False	NA	NA	NA	69804857	69807417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
tx.3013	chr11	-	1309	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	34	0	34	0	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	11451	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	9975	False	NA	NA	False	NA	NA	NA	69812178	69807545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
tx.3014	chr11	+	2270	8	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	50	-1	intron_retention	FALSE	canonical	3	30	junction_2	25.2384546245751	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGTCTCTGGCTCTTC	NA	False	NA	NA	False	NA	NA	NA	69826671	69832430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
tx.3015	chr11	+	1656	9	FSM	ENSMUSG00000018554.14	ENSMUST00000018698.12	1673	9	15	2	15	-2	multi-exon	FALSE	canonical	3	30	junction_3	26.1291862674673	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGGTCTCTGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	69826636	69832429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
tx.3016	chr11	+	4571	6	NIC	ENSMUSG00000018554.14	novel	1351	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	43	junction_1	17.8840711248865	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCCTGGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	69826606	69832423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
tx.3017	chr11	+	5117	5	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	80	junction_3	5.06828373317832	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGGTCTCTGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	69826612	69832429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
tx.3018	chr11	+	2878	6	NNC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	1511	1	intron_retention	FALSE	canonical	2	5	junction_1	32.8146308831899	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTGTCCTGGTCTCT	NA	False	NA	NA	False	NA	NA	NA	69828663	69832422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_69830519_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
tx.3019	chr11	-	2574	11	FSM	ENSMUSG00000018566.15	ENSMUST00000018710.13	2524	11	-52	2	-13	-2	multi-exon	FALSE	canonical	3	12	junction_2	3.57910603363466	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGAGTGTCCTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	69839027	69833370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69834399_69834884_69835089_69835612_69835715_69835827_69835933_69836094_69836283_69836388_69836552_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
tx.302	chr1	-	2619	7	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	-4	-22	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	22.3737197026631	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTACTGGTATGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	58009291	57994281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58009179
tx.3020	chr11	+	1325	4	FSM	ENSMUSG00000018569.13	ENSMUST00000018713.13	1335	4	8	2	8	1	multi-exon	TRUE	canonical	3	113	junction_1	5.71547606649408	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTCTTTCCAGGCCGCTT	8751	False	NA	NA	False	NA	NA	NA	69856229	69858709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69856976_69857768_69857934_69858045_69858131_69858380
tx.3021	chr11	-	1390	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	708	0	152	0	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	268	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9608	False	NA	NA	False	NA	NA	NA	69871370	69859049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
tx.3022	chr11	+	1974	8	FSM	ENSMUSG00000018559.17_ENSMUSG00002075075.1	ENSMUST00000108593.8	1627	8	-349	2	115	-2	multi-exon	FALSE	canonical	3	123	junction_4	14.8020958251299	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCCCTAGACCCTTCT	NA	False	NA	NA	False	NA	NA	NA	69871632	69881425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
tx.3023	chr11	+	895	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	451	5	-45	-5	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	141	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATTTGCCCTGTGTCAT	5179	False	NA	NA	False	NA	NA	NA	69882419	69885772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
tx.3024	chr11	+	1768	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-63	1	36	0	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	2353	False	NA	NA	False	NA	NA	NA	69886638	69890834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
tx.3025	chr11	+	1981	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	24	1	24	0	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	411	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	2341	False	NA	NA	False	NA	NA	NA	69886626	69890834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
tx.3026	chr11	+	2986	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	-15	-3	-15	3	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	1039	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7120	False	NA	NA	False	NA	NA	NA	69891405	69900940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
tx.3027	chr11	-	2179	20	FSM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	-16	5	-13	1	multi-exon	FALSE	canonical	3	125	junction_10	16.9960073525513	182	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGCCGTGAATGTCAC	NA	False	NA	NA	False	NA	NA	NA	69906250	69901013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
tx.3028	chr11	-	2574	4	FSM	ENSMUSG00000044367.8	ENSMUST00000060010.3	2531	4	-43	0	27	0	multi-exon	FALSE	canonical	3	11	junction_2	1.24721912892465	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGATGGTCAAGCTCAG	NA	False	NA	NA	False	NA	NA	NA	70111863	70107614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70108748_70109418_70110157_70111020_70111165_70111304
tx.3029	chr11	-	779	5	NIC	ENSMUSG00000020831.19	novel	778	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	180.473509136383	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	NA	False	NA	NA	NA	70128737	70126031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_70126295_70126521_70126627_70126849_70127038_70128356_70128452_70128609
tx.303	chr1	-	2506	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	1	5	1	0	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	NA	False	NA	NA	NA	58009286	57994411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
tx.3030	chr11	-	768	5	FSM	ENSMUSG00000020831.19	ENSMUST00000021181.13	779	5	11	0	-1	0	multi-exon	FALSE	canonical	3	264	junction_1	106.829303096107	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	NA	False	NA	NA	NA	70128729	70126031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356_70128452_70128609
tx.3031	chr11	-	883	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108576.10	576	6	-109	-198	-1	0	multi-exon	FALSE	canonical	3	107	junction_1	159.443532324143	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	NA	False	NA	NA	NA	70128739	70126031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70126295_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
tx.3032	chr11	-	617	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	-6	0	-6	0	multi-exon	FALSE	canonical	3	718	junction_2	4	145	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTGTCTGTGCTTTCA	NA	False	NA	NA	False	NA	NA	NA	70130674	70128949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70129297_70129763_70129841_70130481
tx.3033	chr11	-	1260	2	ISM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	15149	-2	15149	2	3prime_fragment	FALSE	canonical	3	725	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCTGCTTTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	70285705	70283706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_70283849_70284587
tx.3034	chr11	-	3440	17	FSM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	-3	-2	0	2	multi-exon	FALSE	canonical	3	551	junction_9	48.6591701917532	972	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCTGCTTTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	70300857	70283706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
tx.3035	chr11	+	1747	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-19	120	-1	0	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	70323459	70331500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
tx.3036	chr11	+	1778	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	0	-1	0	1	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	70323462	70331501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
tx.3037	chr11	+	2147	14	ISM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-14	-27	2	-2	intron_retention	FALSE	canonical	3	204	junction_13	22.4140699683118	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAAACTTGGCTTGG	NA	False	NA	NA	False	NA	NA	NA	70323464	70331647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676
tx.3038	chr11	+	897	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	5	0	5	0	multi-exon	FALSE	canonical	3	117	junction_2	11	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCTCTCTCTCGC	NA	False	NA	NA	False	NA	NA	NA	70342749	70344553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70342890_70343033_70343165_70343927
tx.3039	chr11	+	816	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-14	-4	5	4	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	1863	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTGTGTGAAGGTTCT	NA	False	NA	NA	False	NA	NA	NA	70416197	70418479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
tx.304	chr1	+	4907	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	31	1	31	0	multi-exon	FALSE	canonical	0	0	junction_8	80.2616813928041	391	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATCTATTTATTT	5170	False	NA	NA	False	NA	NA	NA	58035160	58065057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
tx.3040	chr11	+	3776	25	FSM	ENSMUSG00000020828.14	ENSMUST00000018429.12	3659	25	-117	0	-117	0	multi-exon	FALSE	canonical	2	3	junction_10	5.6248456768954	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	70431014	70448936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
tx.3041	chr11	+	4980	32	FSM	ENSMUSG00000020827.19	ENSMUST00000072873.14	4610	32	-20	-350	-11	0	multi-exon	FALSE	canonical	3	41	junction_20	18.9436427990342	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1455	False	NA	NA	False	NA	NA	NA	70453695	70505304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
tx.3042	chr11	+	5006	33	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	22.8920701335637	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1453	False	NA	NA	False	NA	NA	NA	70453693	70505304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
tx.3043	chr11	+	4877	31	FSM	ENSMUSG00000020827.19	ENSMUST00000102558.11	3903	31	-207	-767	-18	1	multi-exon	TRUE	canonical	3	21	junction_17	21.9476397111145	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTTTGAGATCCTACTA	1448	False	NA	NA	False	NA	NA	NA	70453688	70505305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
tx.3044	chr11	-	1635	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	76	0	-4	0	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	615	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	False	NA	NA	False	NA	NA	NA	70537808	70535021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
tx.3045	chr11	+	1836	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	365	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9187	False	NA	NA	False	NA	NA	NA	70538109	70542247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
tx.3046	chr11	-	853	3	FSM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	11	-3	11	3	multi-exon	FALSE	canonical	3	9692	junction_2	172	2325	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGTGTTGGTTTGCAC	NA	False	NA	NA	False	NA	NA	NA	70545459	70542672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70543048_70543612_70543806_70545174
tx.3047	chr11	+	3033	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-2067	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	17.6985781751385	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTGTGTTCCTTAGG	5046	False	NA	NA	False	NA	NA	NA	70545960	70553338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_70547607_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
tx.3048	chr11	+	1575	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1320	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	16.078320705043	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTGTGTTCCTTAGG	5793	False	NA	NA	False	NA	NA	NA	70546707	70553338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_70546896_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
tx.3049	chr11	+	1449	12	FSM	ENSMUSG00000060600.16	ENSMUST00000072841.12	1454	12	3	2	1	1	multi-exon	FALSE	canonical	2	23	junction_1	14.3486688414174	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGCTGTGTTCCTTAG	7116	False	NA	NA	False	NA	NA	NA	70548030	70553337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
tx.305	chr1	+	3580	3	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	19702	1	-7043	0	3prime_fragment	FALSE	canonical	0	0	junction_2	149.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATCTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	58054831	58065057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_58057143_58058747_58058902_58063942
tx.3050	chr11	+	5152	11	FSM	ENSMUSG00000060600.16	ENSMUST00000170716.8	1461	11	-3688	-3	-3094	0	multi-exon	FALSE	canonical	2	42	junction_3	10.4861813831347	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	4019	False	NA	NA	False	NA	NA	NA	70544933	70553339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
tx.3051	chr11	-	1020	7	FSM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	122	17	-4	-17	multi-exon	FALSE	canonical	3	730	junction_3	39.5179284207392	297	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGACTTGTACCTGGA	NA	False	NA	NA	False	NA	NA	NA	70560120	70554613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
tx.3052	chr11	-	4455	22	FSM	ENSMUSG00000040712.17	ENSMUST00000119120.2	4460	22	4	1	2	-1	multi-exon	FALSE	canonical	3	17	junction_14	5.19680697362221	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCCTCCGGCCTCTCTCT	8381	False	NA	NA	False	NA	NA	NA	70578777	70560290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574177_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
tx.3053	chr11	+	2020	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	39	2	39	-2	multi-exon	FALSE	canonical	3	29	junction_1	0	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTCCTCTGGCCTTTCC	961	False	NA	NA	False	NA	NA	NA	70655073	70663752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70655376_70662034
tx.3054	chr11	+	5113	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-11	-201	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	40.6215383140521	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGTGTGGCCTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	70735592	70833730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
tx.3055	chr11	+	5223	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-15	200	-15	-200	multi-exon	TRUE	canonical	3	115	junction_10	23.0000752217816	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTGTGGCCTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	70735588	70833731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
tx.3056	chr11	-	2447	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	1	5	1	0	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	536	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	NA	False	NA	NA	NA	70860798	70833902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
tx.3057	chr11	-	2432	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-18	-25	1	0	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	645	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	NA	False	NA	NA	NA	70860798	70833902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
tx.3058	chr11	+	1576	6	NIC	ENSMUSG00000018449.13	novel	1100	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	224	junction_4	52.6748516846512	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTTCTGATGTGGG	NA	False	NA	NA	False	NA	NA	NA	70861301	70868631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70865867_70868483
tx.3059	chr11	+	812	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	260	28	-7	0	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTTCTGATGTGGG	NA	False	NA	NA	False	NA	NA	NA	70861298	70868631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
tx.306	chr1	+	4413	35	FSM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	38	155	-12	-155	multi-exon	FALSE	canonical	3	19	junction_6	6.33501009795379	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCAGTGGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	58152332	58239702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
tx.3060	chr11	-	1139	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	20	16	1	-4	multi-exon	FALSE	canonical	3	4814	junction_4	225.05234946563	2317	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAGGAAAGTTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	70873832	70868677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
tx.3061	chr11	-	5210	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-30	4	-30	-4	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTCTTGGTATCCAGCA	NA	False	NA	NA	False	NA	NA	NA	70895293	70874920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
tx.3062	chr11	-	3621	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	42	3	8	-3	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	388	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	70910087	70898270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
tx.3063	chr11	+	2560	3	FSM	ENSMUSG00000040599.14	ENSMUST00000133413.8	344	3	-25	-2191	-25	-2	multi-exon	FALSE	canonical	3	36	junction_1	44	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTATTATTGCTTA	NA	False	NA	NA	False	NA	NA	NA	70910411	70918195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70910550_70915375_70915538_70915935
tx.3064	chr11	+	2749	4	FSM	ENSMUSG00000040599.14	ENSMUST00000164220.8	1416	4	-26	-1307	-26	2	multi-exon	FALSE	canonical	3	11	junction_1	46.3057471835	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTATTGCTTAATAT	NA	False	NA	NA	False	NA	NA	NA	70910410	70918199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70910550_70910831_70911016_70915375_70915538_70915935
tx.3065	chr11	+	3393	3	NNC	ENSMUSG00000040599.14	novel	3003	3	NA	NA	-34	0	intron_retention	FALSE	canonical	2	6	junction_1	59	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	NA	False	NA	NA	NA	70910402	70918197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_70911372_70915375_70915538_70915935
tx.3066	chr11	+	3012	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	-11	2	-11	-2	multi-exon	FALSE	canonical	3	76	junction_1	24	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTATTATTGCTTA	NA	False	NA	NA	False	NA	NA	NA	70910425	70918195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_70911016_70915375_70915538_70915935
tx.3067	chr11	+	1635	2	ISM	ENSMUSG00000020811.17	ENSMUST00000108511.8	2866	9	9	28676	9	3	5prime_fragment	FALSE	canonical	3	14	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTTTGTTGTGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	71641814	71651797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_71642056_71650403
tx.3068	chr11	+	2854	9	FSM	ENSMUSG00000020811.17	ENSMUST00000108511.8	2866	9	9	3	9	-3	multi-exon	FALSE	canonical	3	7	junction_4	2.29128784747792	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGTGTCTCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	71641814	71680470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_71642056_71650403_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494
tx.3069	chr11	-	1656	7	NNC	ENSMUSG00000040554.11	novel	2309	6	NA	NA	-4789	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	1.63299316185545	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTGATTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	71933124	71919542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_71920283_71921032_71921175_71921251_71921429_71922242_71922432_71927437_71927618_71928188_71928286_71932993
tx.307	chr1	+	3641	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	234	1	0	-1	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	2900	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTACTGTGTCTGTGCTT	891	False	NA	NA	False	NA	NA	NA	58432290	58446511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
tx.3070	chr11	+	1109	6	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.202448182704	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	NA	False	NA	NA	NA	71933280	71938196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937916
tx.3071	chr11	+	1508	6	FSM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	4	1	4	-1	multi-exon	FALSE	canonical	0	0	junction_3	92.1316449435263	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATGTTTTTAGATATC	NA	False	NA	NA	False	NA	NA	NA	71933284	71938195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937512
tx.3072	chr11	-	6596	20	FSM	ENSMUSG00000040543.17	ENSMUST00000075258.13	6555	20	-41	0	-41	0	multi-exon	TRUE	canonical	1	2	junction_1	2.67542421623975	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCGCTCTGTTTTGGGCT	NA	False	NA	NA	False	NA	NA	NA	72026645	71938353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_71942187_71942666_71942796_71946955_71947140_71948845_71948996_71949211_71949361_71949663_71949781_71952299_71952417_71953920_71954070_71954888_71955084_71956291_71956463_71957931_71958105_71961128_71961314_71961713_71961837_71962224_71962415_71965244_71965481_71965784_71965862_71983353_71983402_72003082_72003191_72010912_72011009_72026479
tx.3073	chr11	-	4393	19	FSM	ENSMUSG00000020807.16	ENSMUST00000238653.2	4390	19	-5	2	-5	-2	multi-exon	FALSE	canonical	3	10	junction_18	5.57025832235613	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTATTTGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	72098262	72044924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72098021
tx.3074	chr11	+	744	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	11	226	11	-226	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	361	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTTTTTTAACACGTG	NA	False	NA	NA	False	NA	NA	NA	72098383	72100615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
tx.3075	chr11	-	630	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	531	0	-8	0	multi-exon	FALSE	canonical	3	203	junction_2	14.0079342596338	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGATTGCTCCACTTTGA	NA	False	NA	NA	False	NA	NA	NA	72105887	72102549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
tx.3076	chr11	-	1494	2	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACCCGTGTTGCTATTCT	NA	False	NA	NA	False	NA	NA	NA	72123031	72115358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_72116591_72122769
tx.3077	chr11	-	3319	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	5	5	5	-5	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGTGCCTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	72157480	72132819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
tx.3078	chr11	-	1141	6	ISM	ENSMUSG00000020799.17	ENSMUST00000108502.8	1403	8	3612	2	3612	-2	3prime_fragment	FALSE	canonical	3	33	junction_5	9.09065454189081	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTAGCACAGAGCTCT	NA	False	NA	NA	False	NA	NA	NA	72248510	72235549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72248310
tx.3079	chr11	-	2627	8	FSM	ENSMUSG00000045667.15	ENSMUST00000050226.7	2624	8	-5	2	-5	-2	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	961	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTTTGAGTGATCATT	NA	False	NA	NA	False	NA	NA	NA	72302544	72280941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
tx.308	chr1	+	2839	5	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	8500	3	7928	-3	3prime_fragment	FALSE	canonical	3	1694	junction_4	129.120825198726	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACGTACTGTGTCTGTGC	9157	False	NA	NA	False	NA	NA	NA	58440556	58446509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
tx.3080	chr11	+	4143	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	-3	218	-3	-218	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	5829	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	NA	False	NA	NA	NA	72332177	72342376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
tx.3081	chr11	+	2118	7	NNC	ENSMUSG00000020794.14	novel	3931	7	NA	NA	-64	-1867	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	361.934347944793	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTTGTTGGCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	72498044	72575440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_72498462_72553896_72554000_72560859_72560966_72563785_72563884_72568530_72568710_72570194_72570319_72574349
tx.3082	chr11	+	3848	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-35	2	-35	-2	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	846	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGAGCTATTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	72498073	72577305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
tx.3083	chr11	+	7106	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	2	922	2	3	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	NA	False	NA	NA	NA	72580833	72662050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
tx.3084	chr11	+	6967	24	NIC	ENSMUSG00000020790.15	novel	7154	25	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	29.9114003593208	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGTAAACTTT	NA	False	NA	NA	False	NA	NA	NA	72580833	72662047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
tx.3085	chr11	+	4572	21	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.5224433263604	126	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	72852006	72883865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
tx.3086	chr11	+	4500	20	NNC	ENSMUSG00000020788.16	novel	4520	21	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.1492052105957	34	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	72852005	72883865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
tx.3087	chr11	+	3624	17	NNC	ENSMUSG00000020785.18	novel	3424	16	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	7.21543484483091	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTATGTCTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	72909813	72932899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_72909954_72910193_72910339_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
tx.3088	chr11	+	3477	16	FSM	ENSMUSG00000020785.18	ENSMUST00000092937.13	3424	16	-53	0	-18	0	multi-exon	FALSE	canonical	2	15	junction_1	5.11815939137846	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTATGTCTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	72909815	72932899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
tx.3089	chr11	+	3295	15	ISM	ENSMUSG00000020785.18	ENSMUST00000092937.13	3424	16	6538	0	-1004	0	3prime_fragment	FALSE	canonical	2	17	junction_11	4.63625904789451	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTATGTCTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	72916406	72932899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
tx.309	chr1	-	1697	12	FSM	ENSMUSG00000026034.18	ENSMUST00000148330.8	1705	12	8	0	8	0	multi-exon	FALSE	canonical	3	65	junction_9	47.751422461613	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	58463217	58451158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
tx.3090	chr11	+	2909	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	89	9108	-1	-9108	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	474	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCACTCTTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	72938697	72971035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
tx.3091	chr11	+	804	5	ISM	ENSMUSG00000005947.12	ENSMUST00000006101.4	3845	31	47828	-4	47828	4	3prime_fragment	FALSE	canonical	3	28	junction_3	3.24037034920393	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTTTGAGACATAGT	NA	False	NA	NA	False	NA	NA	NA	73029236	73038276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_73029338_73029592_73029689_73031492_73031589_73036366_73036478_73037876
tx.3092	chr11	+	2567	13	FSM	ENSMUSG00000005950.15	ENSMUST00000006104.10	2395	13	-174	2	-174	-2	multi-exon	FALSE	canonical	2	4	junction_5	3.62476052848859	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCTGACCTGTGCCC	3194	False	NA	NA	False	NA	NA	NA	73051072	73063509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_73051560_73055681_73055833_73056365_73056438_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062590
tx.3093	chr11	-	1319	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	10	3	10	-3	multi-exon	FALSE	canonical	3	946	junction_1	0	382	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTGCGCATGGAAT	NA	False	NA	NA	False	NA	NA	NA	73067853	73066347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_73067578_73067764
tx.3094	chr11	+	1259	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	158	106	-10	-1	multi-exon	FALSE	canonical	3	98	junction_1	3.09120616516523	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGGTTTCTGTTAGAT	4366	False	NA	NA	False	NA	NA	NA	73068066	73072872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
tx.3095	chr11	-	2564	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	5	1	5	0	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGGAACGTTTACTAG	4470	False	NA	NA	False	NA	NA	NA	73089863	73074422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
tx.3096	chr11	-	2394	10	NIC	ENSMUSG00000005949.10	novel	2570	11	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	20.4673784409952	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGGAACGTTTACTAGA	4470	False	NA	NA	False	NA	NA	NA	73089863	73074421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_73075878_73076063_73076182_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
tx.3097	chr11	+	2837	7	FSM	ENSMUSG00000005951.14	ENSMUST00000006105.7	2808	7	-29	0	-29	0	multi-exon	TRUE	canonical	0	0	junction_6	1.34370962471642	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTTTGATGAACACACAC	4963	False	NA	NA	False	NA	NA	NA	73090256	73115337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_73090507_73094747_73094890_73104156_73104341_73104880_73105034_73105790_73105967_73108624_73108826_73113606
tx.3098	chr11	-	6386	24	NIC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	141	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	5.74768795466461	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTCACATTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	74413436	74274308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
tx.3099	chr11	+	5414	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	-35	0	-15	0	multi-exon	TRUE	canonical	0	0	junction_12	69.5319897601097	427	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	74540305	74561673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
tx.31	chr1	-	1746	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	-930	0	-35	0	multi-exon	FALSE	canonical	3	538	junction_1	75	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	NA	False	NA	NA	NA	10014378	10012247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_10012381_10012547_10012617_10012834
tx.310	chr1	-	1788	13	FSM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	8	0	8	0	multi-exon	FALSE	canonical	3	45	junction_9	59.1577458063514	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	58463217	58451158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
tx.3100	chr11	+	3891	17	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	12024	0	-2943	0	3prime_fragment	FALSE	canonical	0	0	junction_3	84.1276699056262	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	74552364	74561673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
tx.3101	chr11	-	4415	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	303	1085	-32	-1084	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	1124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGGATGGTTGTTGATT	NA	False	NA	NA	False	NA	NA	NA	74615193	74565859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
tx.3102	chr11	+	2807	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	9	797	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	139.204202522769	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8503	False	NA	NA	False	NA	NA	NA	74661664	74709517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
tx.3103	chr11	+	2737	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	13	9834	13	797	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	302	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8507	False	NA	NA	False	NA	NA	NA	74661668	74709517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
tx.3104	chr11	+	4609	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	-22	3	-22	-3	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGCAGCATCTGGGT	NA	False	NA	NA	False	NA	NA	NA	74721723	74736548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
tx.3105	chr11	+	4019	5	ISM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	5515	17	109	-17	3prime_fragment	FALSE	canonical	3	77	junction_1	4.15331193145904	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACGGAGCTCCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	74727260	74736534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
tx.3106	chr11	-	4786	23	FSM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	-45	2	-45	-2	multi-exon	TRUE	canonical	3	35	junction_12	13.4016928744404	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCTCTGATGGCTATT	NA	False	NA	NA	False	NA	NA	NA	74787931	74740088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
tx.3107	chr11	-	4901	24	FSM	ENSMUSG00000038351.15	ENSMUST00000081799.6	4873	24	-26	-2	-26	2	multi-exon	FALSE	canonical	3	24	junction_12	16.1025776095344	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	NA	False	NA	NA	NA	74787912	74740089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
tx.3108	chr11	-	4089	24	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-45	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5822648540954	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	NA	False	NA	NA	NA	74787931	74740089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_74740901_74741596_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
tx.3109	chr11	+	3376	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	11	2	-9	-2	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	1371	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	NA	False	NA	NA	NA	74788914	74800166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
tx.311	chr1	-	2457	9	ISM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	3047	0	239	0	intron_retention	FALSE	canonical	3	153	junction_8	23.5743504682526	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	58460178	58451158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825
tx.3110	chr11	+	3537	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	655	junction_7	78.2339837475873	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	NA	False	NA	NA	NA	74788914	74800166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
tx.3111	chr11	+	2792	11	ISM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	2073	2	-1562	-2	3prime_fragment	FALSE	canonical	3	655	junction_4	78.6008269676598	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	NA	False	NA	NA	NA	74790976	74800166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
tx.3112	chr11	-	3167	9	NIC	ENSMUSG00000001323.18	novel	3699	9	NA	NA	-3	2	intron_retention	FALSE	canonical	3	5	junction_8	27.485223302713	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTATTTGGGGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	74816489	74797616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816409
tx.3113	chr11	-	2949	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	240	-6	-5	0	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTTATTTGGGGGTGT	NA	False	NA	NA	False	NA	NA	NA	74816534	74797618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
tx.3114	chr11	-	3694	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	-119	124	31	26	multi-exon	FALSE	canonical	3	15	junction_8	25.2140833662459	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGACAGCTACACACAAGT	NA	False	NA	NA	False	NA	NA	NA	74816743	74797308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
tx.3115	chr11	-	2852	7	ISM	ENSMUSG00000001323.18	ENSMUST00000108448.8	3239	9	12639	8	12524	-2	3prime_fragment	FALSE	canonical	3	57	junction_4	12.8419884233972	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATACATCTCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	74803960	74797626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787
tx.3116	chr11	+	5857	19	FSM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	-9	0	-9	0	multi-exon	FALSE	canonical	3	122	junction_1	11.7104996677826	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	NA	NA	NA	74816639	75055274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
tx.3117	chr11	+	5126	18	ISM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	3708	3	-989	-3	3prime_fragment	FALSE	canonical	3	125	junction_1	10.6543686314233	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGACCTCTGCTGGTCT	NA	False	NA	-6	True	NA	NA	NA	74820356	75055271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
tx.3118	chr11	-	2488	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	20	162	20	-162	multi-exon	FALSE	canonical	3	105	junction_1	0	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTTGGTCTATTTGC	1657	False	NA	NA	False	NA	NA	NA	75069641	75066929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_75069214_75069437
tx.3119	chr11	-	3689	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	42	1537	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	62.59526073647	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACCCTTTGGTCTATTT	NA	False	NA	NA	False	NA	NA	NA	75081303	75066931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081169
tx.312	chr1	-	1397	7	FSM	ENSMUSG00000026035.16	ENSMUST00000117069.8	1363	7	-41	7	12	-4	multi-exon	FALSE	canonical	3	14	junction_6	68.4505092911822	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACATGTGAGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	58484629	58470159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58483969
tx.3120	chr11	-	2134	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	43	-38	43	38	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCGGCTTATTGTGTG	NA	False	NA	NA	False	NA	NA	NA	75081302	75068430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
tx.3121	chr11	+	3512	2	FSM	ENSMUSG00000045287.7	ENSMUST00000102514.4	3525	2	11	2	11	-2	multi-exon	FALSE	canonical	3	24	junction_1	0	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTTTTTTATTTCCT	NA	False	NA	NA	False	NA	NA	NA	75084619	75158593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75085121_75155582
tx.3122	chr11	-	2882	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	13	2182	-1	2	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	1766	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTGACTGTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	75239137	75191173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
tx.3123	chr11	+	3338	12	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-10	-10	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	20.2051462227893	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATGGCAACTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	75239310	75296521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75280967_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
tx.3124	chr11	+	3456	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	48	13	-14	-13	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGATGGCAACTCTG	NA	False	NA	NA	False	NA	NA	NA	75239306	75296518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
tx.3125	chr11	-	6871	10	FSM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	31	6	31	0	multi-exon	TRUE	canonical	2	7	junction_2	4.57043640026736	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGAGTGAGGCTGTGTT	2840	False	NA	NA	False	NA	NA	NA	75345512	75331775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75336920_75338689_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
tx.3126	chr11	-	5229	6	ISM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	33	6404	33	819	5prime_fragment	FALSE	canonical	2	11	junction_3	4.04969134626332	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTGTTTTTGTTAA	2842	False	NA	NA	False	NA	NA	NA	75345510	75338173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
tx.3127	chr11	+	1665	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	103	-16	-2	16	multi-exon	FALSE	canonical	3	9	junction_2	6.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTATGAGTGTTTTGC	3941	False	NA	NA	False	NA	NA	NA	75352467	75357518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75352582_75354518_75354684_75356132
tx.3128	chr11	+	3103	2	FSM	ENSMUSG00000085148.2	ENSMUST00000134345.2	449	2	6	-2660	6	13	multi-exon	FALSE	canonical	3	22	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTTTTATGAGTGTTT	3949	False	NA	NA	False	NA	NA	NA	75352475	75357515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75352582_75354518
tx.3129	chr11	+	1903	4	ISM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	-15	5	-15	-5	intron_retention	FALSE	canonical	3	27	junction_1	3.09120616516523	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTCTCTTGTGAATGT	NA	False	NA	NA	False	NA	NA	NA	75358889	75361720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297
tx.313	chr1	+	2207	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	372	1190	-105	0	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGACACACTGTAT	NA	False	NA	NA	False	NA	NA	NA	58484681	58501425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
tx.3130	chr11	+	7439	42	FSM	ENSMUSG00000020850.15	ENSMUST00000018449.11	7442	42	3	0	-1	0	multi-exon	FALSE	canonical	3	217	junction_5	157.019499238112	216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	NA	False	NA	NA	NA	75377644	75400273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
tx.3131	chr11	+	2896	11	FSM	ENSMUSG00000038188.18	ENSMUST00000042808.13	2887	11	-13	4	-13	0	multi-exon	FALSE	canonical	1	3	junction_9	2.37697286480094	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAATTAATTTATTTG	NA	False	NA	NA	False	NA	NA	NA	75404352	75417404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75404517_75404830_75404890_75405134_75405237_75405991_75406515_75411119_75411339_75411728_75411858_75412777_75412882_75413004_75413123_75414600_75414723_75414816_75414964_75416195
tx.3132	chr11	+	3138	14	FSM	ENSMUSG00000038178.17	ENSMUST00000042561.14	6891	14	-28	3781	-24	-89	multi-exon	FALSE	canonical	3	5	junction_1	10.1858470089601	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTATCAGCTAATTACTGT	6847	False	NA	NA	False	NA	NA	NA	75422495	75464620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75422568_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
tx.3133	chr11	+	3126	14	FSM	ENSMUSG00000038178.17	ENSMUST00000108433.8	3236	14	17	93	17	-93	multi-exon	FALSE	canonical	2	8	junction_1	9.5805522935017	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACGTATCAGCTAATTA	6892	False	NA	NA	False	NA	NA	NA	75422540	75464616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75422605_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
tx.3134	chr11	+	3330	14	FSM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	36	3779	10	-92	multi-exon	FALSE	canonical	3	23	junction_1	7.15095061334898	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGTATCAGCTAATTAC	7325	False	NA	NA	False	NA	NA	NA	75422973	75464617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
tx.3135	chr11	+	1679	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	304	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATCTCTGGTTAATATT	NA	False	NA	NA	False	NA	NA	NA	75478923	75517557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
tx.3136	chr11	+	2671	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	2	6	2	0	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCGTGTGACTCCTTT	5441	False	NA	NA	False	NA	NA	NA	75521815	75539691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
tx.3137	chr11	+	4532	32	FSM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	15	0	15	0	multi-exon	FALSE	canonical	3	188	junction_1	33.5644192461903	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	8858	False	NA	NA	False	NA	NA	NA	75542350	75564736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
tx.3138	chr11	+	4586	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	134	-2	134	0	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	75546832	75564736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
tx.3139	chr11	+	3633	3	FSM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	33	-24	8	24	multi-exon	FALSE	canonical	3	225	junction_2	120.5	385	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGAAAGTAATCTTGAAA	2131	False	NA	NA	False	NA	NA	NA	75570117	75596915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75570491_75583022_75583559_75594191
tx.314	chr1	+	2076	6	FSM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	3	19	3	-19	multi-exon	FALSE	canonical	3	215	junction_2	29.7119504576862	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATTAAATAAACCTTA	NA	False	NA	NA	False	NA	NA	NA	58486792	58501406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
tx.3140	chr11	+	3461	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	13	816	13	27	multi-exon	FALSE	canonical	3	229	junction_2	118.5	321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTAATCTTGAAATAT	2136	False	NA	NA	False	NA	NA	NA	75570122	75596918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75570491_75583022_75583389_75594191
tx.3141	chr11	+	1835	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	47	218	3	-218	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	7476	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATATTTGACAGTATTGT	3038	False	NA	NA	False	NA	NA	NA	75623741	75656453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
tx.3142	chr11	-	2127	8	FSM	ENSMUSG00000020847.16	ENSMUST00000066504.11	988	8	0	-1139	0	1	multi-exon	FALSE	canonical	3	14	junction_1	2.29462548631557	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCGCAAGAGTCGTTT	NA	False	NA	NA	False	NA	NA	NA	75801888	75721823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_75723041_75724227_75724375_75725588_75725703_75745129_75745305_75769774_75769862_75797343_75797474_75799736_75799881_75801775
tx.3143	chr11	-	3493	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	19	0	19	0	multi-exon	FALSE	canonical	3	32	junction_2	0.5	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGGAATGCGTTTGTTT	7906	False	NA	NA	False	NA	NA	NA	75918589	75910019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_75913067_75915773_75915884_75918253
tx.3144	chr11	-	2751	22	FSM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	12	70	-1	0	multi-exon	FALSE	canonical	3	37	junction_11	13.2142642642469	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTTATTTTCTATCTC	NA	False	NA	NA	False	NA	NA	NA	76070461	75937121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
tx.3145	chr11	+	2128	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	1	1	1	-1	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3407	False	NA	NA	False	NA	NA	NA	76092841	76100241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
tx.3146	chr11	+	1919	4	NIC	ENSMUSG00000069808.14	novel	2130	5	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	24.0739601136904	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3414	False	NA	NA	False	NA	NA	NA	76092848	76100241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_76093082_76093377_76093462_76097953_76098050_76098735
tx.3147	chr11	-	3437	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	103	0	-44	0	multi-exon	FALSE	canonical	3	437	junction_1	0	820	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	NA	False	NA	NA	NA	76108387	76101396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_76104750_76108303
tx.3148	chr11	-	2271	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	32	-869	-18	869	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	489	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTGTGATCATGGTG	NA	False	NA	NA	False	NA	NA	NA	76134519	76111466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
tx.3149	chr11	+	1474	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	35	1	14	-1	multi-exon	FALSE	canonical	3	128	junction_1	6.53197264742181	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATATGAGTGTTTGCAG	585	False	NA	NA	False	NA	NA	NA	76134575	76141444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
tx.315	chr1	-	3402	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	150	9	-4	-9	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	699	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGAGTCCTTTTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	58544118	58501938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
tx.3150	chr11	-	1732	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111686	-760	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	32.3412922387691	31	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTACTGTGTGCTTAGTT	1414	False	NA	NA	False	NA	NA	NA	76178208	76148783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178031
tx.3151	chr11	-	2025	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	-30	760	-30	-760	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTACTGTGTGCTTAGTT	NA	False	NA	NA	False	NA	NA	NA	76289996	76148783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
tx.3152	chr11	+	2029	3	FSM	ENSMUSG00000020843.16	ENSMUST00000152183.2	362	3	-30	-1637	18	-573	multi-exon	FALSE	canonical	3	21	junction_1	125	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACCTTTGCTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	76297986	76306545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_76298269_76301952_76302026_76304871
tx.3153	chr11	+	1069	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	32	1716	-16	247	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAGTATCTTTGCTGTCC	NA	False	NA	NA	False	NA	NA	NA	76298000	76305402	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
tx.3154	chr11	-	5239	23	FSM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	154	1	154	0	multi-exon	FALSE	canonical	3	154	junction_22	28.8783427101686	290	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	6273	False	NA	NA	False	NA	NA	NA	76462207	76307560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
tx.3155	chr11	-	6265	23	FSM	ENSMUSG00000017631.20	ENSMUST00000238684.2	6271	23	5	1	5	0	multi-exon	FALSE	canonical	3	102	junction_22	37.5075749925023	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	76514379	76307560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
tx.3156	chr11	-	6175	24	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-235	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_23	55.4650727135133	56	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	76514619	76307560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514490
tx.3157	chr11	-	4280	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	9	0	-3	0	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	285	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTCTTTGGTTATCTG	NA	False	NA	NA	False	NA	NA	NA	76654396	76617427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
tx.3158	chr11	-	7010	8	NIC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	229	junction_6	28.0502464611385	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTCTTTGGTTATCTG	NA	False	NA	NA	False	NA	NA	NA	76654396	76617427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_76621060_76625394_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
tx.3159	chr11	-	7972	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-30	4	-30	-4	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTTCTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	76737874	76669253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
tx.316	chr1	-	8736	12	NIC	ENSMUSG00000038174.15	novel	8685	12	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	9.78360916351746	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTTCCCTGAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	58625449	58561969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58604926_58605114_58625370
tx.3160	chr11	+	2255	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	241	1	6	-1	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	1001	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGCCGGCGTGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	76836570	76878204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
tx.3161	chr11	-	3092	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	12	10	12	-10	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGGAACCTGACATCC	NA	False	NA	NA	False	NA	NA	NA	76969249	76935127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
tx.3162	chr11	+	9263	15	FSM	ENSMUSG00000037926.16	ENSMUST00000037912.12	9178	15	-88	3	-88	-3	multi-exon	TRUE	canonical	2	7	junction_1	4.23361186078213	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTGTTTCAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	77107024	77351043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77107342_77218278_77218323_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
tx.3163	chr11	+	2516	10	NIC	ENSMUSG00000020836.16	novel	2804	11	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.16227766016838	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTTGAAACCGCTTTT	4134	False	NA	NA	False	NA	NA	NA	77353407	77361310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_77353581_77354677_77354937_77356491_77356615_77357020_77357151_77357243_77357426_77359091_77359197_77359286_77359433_77359735_77359794_77359882_77360114_77360201
tx.3164	chr11	+	3739	20	FSM	ENSMUSG00000011877.14	ENSMUST00000037285.10	3512	20	-243	16	-243	-16	multi-exon	TRUE	canonical	3	24	junction_7	121.3660245347	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGATGTCTAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	77384144	77398596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393654_77393682_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
tx.3165	chr11	+	3713	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-252	15	-243	-15	multi-exon	FALSE	canonical	3	379	junction_15	38.5310921429486	847	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATGTCTAGAGGTTG	NA	False	NA	NA	False	NA	NA	NA	77384144	77398597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
tx.3166	chr11	-	1585	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	73	-7	intron_retention	FALSE	canonical	3	152	junction_1	15.3179633110933	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGAGTCGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	77404123	77398931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403792_77403985
tx.3167	chr11	-	1384	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	73	6	73	-6	multi-exon	FALSE	canonical	3	152	junction_1	13.984117975602	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	NA	False	NA	NA	NA	77404123	77398930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
tx.3168	chr11	-	1685	5	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	53	-6	intron_retention	FALSE	canonical	3	179	junction_4	7.43303437365925	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	NA	False	NA	NA	NA	77404143	77398930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403792_77403985
tx.3169	chr11	-	1505	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	31	-6	intron_retention	FALSE	canonical	3	179	junction_5	7.1386273190299	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	NA	False	NA	NA	NA	77404165	77398930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
tx.317	chr1	-	8519	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	8	158	8	-158	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCGTCTGCAATGCAGA	NA	False	NA	NA	False	NA	NA	NA	58625474	58562122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
tx.3170	chr11	+	3062	2	FSM	ENSMUSG00000000686.12	ENSMUST00000094004.5	2662	2	-22	-378	-22	378	multi-exon	FALSE	canonical	2	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACTGAGCCTTCTAATC	NA	False	NA	NA	False	NA	NA	NA	77405924	77411249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77406879_77409141
tx.3171	chr11	-	12445	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	-44	8	-44	-8	multi-exon	FALSE	canonical	3	12	junction_19	12.6460443488519	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACAGTGTCTGCTCACT	8107	False	NA	NA	False	NA	NA	NA	77498685	77419995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
tx.3172	chr11	-	8745	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-37	-3764	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGAACTCTTTTGTGCA	8114	False	NA	NA	False	NA	NA	NA	77498678	77423751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
tx.3173	chr11	-	10000	5	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	36031	7	36031	-7	3prime_fragment	FALSE	canonical	3	52	junction_2	9.09326673973661	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTGTCTGCTCACTT	NA	False	NA	NA	False	NA	NA	NA	77440301	77419994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097
tx.3174	chr11	-	5783	22	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-37	-6813	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	16.9562595883946	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAACAAAAGAAAGGT	8114	False	NA	NA	False	NA	NA	NA	77498678	77426800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77496377_77496465_77498033
tx.3175	chr11	+	4451	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-14	721	-14	-721	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	364	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTCCAGTTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	77576966	77602846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
tx.3176	chr11	+	3793	3	ISM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	5678	721	4232	-721	3prime_fragment	FALSE	canonical	3	202	junction_1	3	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTCCAGTTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	77582658	77602846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_77584081_77596334_77596368_77600508
tx.3177	chr11	+	7476	41	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	17.6113422259634	110	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	NA	False	NA	NA	NA	77654096	77756806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
tx.3178	chr11	+	7495	41	NNC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	26.2390453332434	14	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	NA	False	NA	NA	NA	77654086	77756806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714092_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
tx.3179	chr11	-	1735	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	262	1	262	-1	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	183	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCGGTGGTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	77784660	77771441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
tx.318	chr1	-	8803	13	FSM	ENSMUSG00000038174.15	ENSMUST00000097724.10	4581	13	-15	-4207	-4	-8	multi-exon	FALSE	canonical	3	6	junction_2	9.82450168371574	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGATTTCCCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	58625440	58561972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_58569419_58573643_58573812_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
tx.3180	chr11	+	4508	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-101	3	-53	-3	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	77873526	77921362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
tx.3181	chr11	+	4820	14	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-78	3	-30	-3	intron_retention	FALSE	canonical	3	95	junction_1	14.1258083499126	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	77873549	77921362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668
tx.3182	chr11	+	4395	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	36.0494400813316	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTCTGCCTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	77873568	77921364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_77874204_77874841_77875024_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
tx.3183	chr11	+	3137	11	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-107	4347	-59	0	5prime_fragment	FALSE	canonical	3	95	junction_1	13.3356664625357	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATAAACAACTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	77873520	77917018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710
tx.3184	chr11	+	1752	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	25	2	25	0	multi-exon	FALSE	canonical	3	80	junction_1	5.93190525885234	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTCTGGCTCCCGCCTC	NA	False	NA	NA	False	NA	NA	NA	77923130	77928690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
tx.3185	chr11	+	1832	4	FSM	ENSMUSG00000020834.18	ENSMUST00000122342.2	1791	4	-43	2	29	-2	multi-exon	FALSE	canonical	3	86	junction_3	4.08248290463863	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTCTGGCTCCCGCC	NA	False	NA	NA	False	NA	NA	NA	77923134	77928688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77923530_77924838_77924963_77925100_77925413_77927687
tx.3186	chr11	+	2602	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	19	0	9	0	multi-exon	FALSE	canonical	3	351	junction_3	23.4778619128744	658	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	88	True	NA	NA	NA	77928775	77951260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
tx.3187	chr11	-	2005	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	8	1	8	-1	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATCTTTTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	77971201	77964202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
tx.3188	chr11	-	1828	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	11	175	11	-175	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTTATTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	77971198	77964376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
tx.3189	chr11	+	3750	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-18	-1259	-18	634	multi-exon	FALSE	canonical	3	49	junction_2	46.5	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTCATCTTTTTTTT	2628	False	NA	NA	False	NA	NA	NA	77985515	78048160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77985618_78033918_78034041_78044634
tx.319	chr1	+	518	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	219	26	219	-26	multi-exon	FALSE	canonical	3	979	junction_1	90.5	182	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATTAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	58625761	58635097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_58625830_58630248_58630409_58634807
tx.3190	chr11	+	3862	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	30	-634	-18	634	multi-exon	FALSE	canonical	3	80	junction_2	31	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTCATCTTTTTTTT	2628	False	NA	NA	False	NA	NA	NA	77985515	78048160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_77985618_78033918_78034041_78044522
tx.3191	chr11	+	4012	3	FSM	ENSMUSG00000037750.17	ENSMUST00000155571.2	3358	3	-20	-634	-20	634	multi-exon	FALSE	canonical	3	8	junction_1	36	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTCATCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	78006411	78048160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78006664_78033918_78034041_78044522
tx.3192	chr11	-	2042	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	31	5	31	-5	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	569	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTCCAGCCTGTCTCC	NA	False	NA	NA	False	NA	NA	NA	78056384	78050230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
tx.3193	chr11	-	1492	6	ISM	ENSMUSG00000017405.15	ENSMUST00000152611.8	2882	14	7453	0	670	0	3prime_fragment	FALSE	canonical	3	45	junction_3	5.91269819963779	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	NA	False	NA	NA	False	NA	NA	NA	78059984	78056931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797
tx.3194	chr11	-	2798	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	11	0	11	0	multi-exon	FALSE	canonical	1	11	junction_10	13.5103890486136	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6259	False	NA	NA	False	NA	NA	NA	78067490	78056931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
tx.3195	chr11	-	2920	14	FSM	ENSMUSG00000017405.15	ENSMUST00000152611.8	2882	14	-38	0	-15	0	multi-exon	FALSE	canonical	3	30	junction_7	9.26148734971841	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6274	False	NA	NA	False	NA	NA	NA	78067475	78056931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
tx.3196	chr11	+	1992	3	FSM	ENSMUSG00000019437.18_ENSMUSG00000099101.3	ENSMUST00000140379.2	408	3	-1190	-394	-47	5	multi-exon	FALSE	canonical	3	167	junction_1	12	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCCTGTTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	78068908	78071311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78070279_78070365_78070449_78070772
tx.3197	chr11	+	1358	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	9	45	9	-45	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGGGGACTGCATCATC	NA	False	NA	NA	False	NA	NA	NA	78069519	78071601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
tx.3198	chr11	-	532	5	FSM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	25	3	25	-3	multi-exon	FALSE	canonical	3	10927	junction_1	3598.81438810061	1413	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	5988	False	NA	NA	False	NA	NA	NA	78074385	78071763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074344
tx.3199	chr11	-	738	4	FSM	ENSMUSG00000058546.9	ENSMUST00000127270.2	588	4	-156	6	-156	-3	multi-exon	FALSE	canonical	3	10927	junction_1	3582.37128170713	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	6314	False	NA	NA	False	NA	NA	NA	78074059	78071763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628
tx.32	chr1	-	447	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	-38	64	-38	0	multi-exon	FALSE	canonical	3	370	junction_3	129.892263049036	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	NA	False	NA	NA	NA	10014381	10012247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
tx.320	chr1	+	2092	9	FSM	ENSMUSG00000026029.15	ENSMUST00000027189.15	2585	9	3	490	3	5	multi-exon	FALSE	canonical	2	10	junction_6	4.14578098794425	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTTTTGTTTTGCTT	2927	False	NA	NA	False	NA	NA	NA	58834535	58886172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_58834898_58863073_58863407_58866365_58866472_58868031_58868171_58868254_58868309_58870764_58870827_58872791_58872934_58883502_58884005_58885780
tx.3200	chr11	+	1372	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	-2	-2	-2	2	multi-exon	FALSE	canonical	3	60	junction_1	27.8790243731735	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCTTTCTTTAAAGAT	6023	False	NA	NA	False	NA	NA	NA	78079253	78083016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
tx.3201	chr11	+	3083	10	FSM	ENSMUSG00000002059.19_ENSMUSG00000044122.16	ENSMUST00000150941.8	795	10	-5	-2283	-5	1928	multi-exon	FALSE	canonical	2	3	junction_1	46.6883547486501	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTATGTTAGATCTG	6030	False	NA	NA	False	NA	NA	NA	78079260	78084947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78079338_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
tx.3202	chr11	+	1701	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	-13	-3	-13	-2	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTCTTTAAAGATT	6361	False	NA	NA	False	NA	NA	NA	78079591	78083017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
tx.3203	chr11	-	6174	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	36	278	36	4	multi-exon	TRUE	canonical	3	251	junction_18	43.9224555183955	503	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	78136777	78097849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
tx.3204	chr11	+	1211	4	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	-25	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	99.5199589138893	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTGGTCATTTAT	NA	False	NA	NA	False	NA	NA	NA	78136546	78146318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_78136997_78141841_78142039_78145676_78145738_78145815
tx.3205	chr11	+	1030	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	233	5	233	-5	multi-exon	FALSE	canonical	3	217	junction_1	4	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTGGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	78136804	78146317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78136997_78141841_78142039_78145676
tx.3206	chr11	+	3787	2	FSM	ENSMUSG00000002064.11	ENSMUST00000133020.2	586	2	-2827	-374	2321	-5	multi-exon	FALSE	canonical	3	225	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTGGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	78138892	78146317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78142039_78145676
tx.3207	chr11	+	7442	39	FSM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	-5	6	-5	-6	multi-exon	FALSE	canonical	3	514	junction_1	88.3718730713483	639	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGTCTGTGTCCTTCCC	NA	False	NA	NA	False	NA	NA	NA	78152572	78181443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
tx.3208	chr11	+	3821	24	FSM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	63	3	-32	-3	multi-exon	FALSE	canonical	3	128	junction_10	25.9765053072448	281	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2815	False	NA	NA	False	NA	NA	NA	78192417	78213280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
tx.3209	chr11	+	3080	8	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	176	junction_5	21.6427392736064	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	NA	False	NA	NA	False	NA	NA	NA	78208771	78213280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
tx.321	chr1	-	6197	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	-10	2	-10	-2	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTCCTTGTGATT	1537	False	NA	NA	False	NA	NA	NA	59012599	58939609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
tx.3210	chr11	+	1636	9	FSM	ENSMUSG00000017390.16	ENSMUST00000017534.15	2786	9	129	1021	-71	0	multi-exon	FALSE	canonical	3	130	junction_5	18.6547581061776	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCGCTCTGTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	78213922	78217586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
tx.3211	chr11	+	2315	11	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	37	-9	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	151.766300607216	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATGGATGACCATAACT	NA	False	NA	NA	False	NA	NA	NA	78219277	78233599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
tx.3212	chr11	+	2454	12	FSM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	38	9	38	-9	multi-exon	FALSE	canonical	3	513	junction_10	36.2694234084327	893	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATGGATGACCATAACT	NA	False	NA	NA	False	NA	NA	NA	78219278	78233599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
tx.3213	chr11	+	1307	5	FSM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	15	7	-1	-7	multi-exon	FALSE	canonical	3	235	junction_3	19.8557296516648	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCAGCCTGTGTGTCTA	NA	False	NA	NA	False	NA	NA	NA	78234322	78239983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239356
tx.3215	chr11	+	1962	5	FSM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	13	3	13	-3	multi-exon	FALSE	canonical	3	60	junction_1	12.7549010188241	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGGCTTTGGGGCTTT	8350	False	NA	NA	False	NA	NA	NA	78356535	78362768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196
tx.3216	chr11	-	2445	4	FSM	ENSMUSG00000050132.14	ENSMUST00000153534.2	2497	4	-4	56	-4	22	multi-exon	FALSE	canonical	3	65	junction_3	7.78888096369861	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTCCAGTGGTCCCTG	4409	False	NA	NA	False	NA	NA	NA	78374628	78364094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259
tx.3217	chr11	-	1314	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	33	0	33	0	multi-exon	FALSE	canonical	3	479	junction_5	35.6561355169065	356	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1664	False	NA	NA	False	NA	NA	NA	78402965	78397880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
tx.3218	chr11	+	2911	9	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	26	0	intron_retention	FALSE	canonical	3	1074	junction_7	53.5694642497011	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1661	False	NA	NA	False	NA	NA	NA	78403044	78413562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78409806_78410005_78410132_78411977_78412058_78412619
tx.3219	chr11	+	2727	10	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	70	0	intron_retention	FALSE	canonical	3	1074	junction_8	51.6729984172788	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1705	False	NA	NA	False	NA	NA	NA	78403088	78413562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409806_78410005_78410132_78411977_78412058_78412619
tx.322	chr1	+	2323	12	FSM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	44	593	44	0	multi-exon	FALSE	canonical	3	56	junction_7	10.2964328252857	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTTTTATATATTTTG	NA	False	NA	NA	False	NA	NA	NA	59012724	59034281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
tx.3220	chr11	+	2317	11	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	336.48014800282	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1705	False	NA	NA	False	NA	NA	NA	78403088	78413562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_78403632_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
tx.3221	chr11	+	1989	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	65	0	65	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	1086	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1700	False	NA	NA	False	NA	NA	NA	78403083	78413562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
tx.3222	chr11	-	3596	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	69	55	69	-55	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	NA	False	NA	NA	NA	78427028	78413730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
tx.3223	chr11	-	3582	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	130	56	69	-56	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	226	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTTCCAGTGAGCA	NA	False	NA	NA	False	NA	NA	NA	78427028	78413731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
tx.3224	chr11	+	1437	5	FSM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	-23	-247	-6	-5	multi-exon	FALSE	canonical	3	238	junction_1	109.732344821388	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	78427247	78432558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720
tx.3225	chr11	+	1067	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	67	7	0	-7	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTATGGTGCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	78427253	78432556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
tx.3226	chr11	+	846	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-25	-239	-10	-9	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTATGGTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	78427243	78432554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
tx.3227	chr11	-	1341	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	34	0	34	0	multi-exon	TRUE	canonical	3	1037	junction_2	9	566	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	78441569	78432642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78433623_78434311_78434457_78441353
tx.3228	chr11	-	3538	12	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-244	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_1	27.2178235234813	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTCGCTGTCTTATTTCC	NA	False	NA	NA	False	NA	NA	NA	78588443	78457993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_78458569_78459718_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
tx.3229	chr11	-	4531	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-89	2	-89	-2	multi-exon	FALSE	canonical	3	79	junction_6	8.57962703152066	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGTCGCTGTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	78588288	78457995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
tx.323	chr1	-	1800	11	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	16	29	combination_of_known_splicesites	FALSE	canonical	3	28	junction_10	51.7934358775318	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCGCCAGTTATTT	4356	False	NA	NA	False	NA	NA	NA	59158949	59139719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59158861
tx.3230	chr11	+	2599	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	1	5435	1	2160	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAGAAAAAGGAAAAC	NA	False	NA	NA	False	NA	NA	NA	78717410	78732261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
tx.3231	chr11	-	187	2	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	31	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAACAGGACACAT	NA	False	NA	NA	False	NA	NA	NA	78872525	78804309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_78804447_78872475
tx.3232	chr11	-	1515	10	FSM	ENSMUSG00000001123.16	ENSMUST00000108268.10	1520	10	1	4	1	1	multi-exon	FALSE	canonical	3	15	junction_9	3.82970843102535	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGAGATGGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	78875771	78853803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
tx.3233	chr11	-	5559	18	NIC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-69	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_14	9.7916001003897	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGACTCCTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79037302	78904265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
tx.3234	chr11	-	6667	18	NIC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-110	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	9.61328377369018	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATCTGGAGACTCCTG	NA	False	NA	NA	False	NA	NA	NA	79037343	78904271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
tx.3235	chr11	-	2812	4	FSM	ENSMUSG00000017677.12	ENSMUST00000150416.8	2338	4	-471	-3	-471	3	multi-exon	FALSE	canonical	3	470	junction_2	11.8977121983832	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGCCGATATTTCTTT	5768	False	NA	NA	False	NA	NA	NA	79134321	79130210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809
tx.3236	chr11	-	2466	9	FSM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	-4	14	-4	2	multi-exon	FALSE	canonical	3	217	junction_4	86.5338625914734	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTGCCGATATTTCTT	971	False	NA	NA	False	NA	NA	NA	79145501	79130211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
tx.3237	chr11	+	7238	15	FSM	ENSMUSG00000017639.14	ENSMUST00000017783.13	7156	15	-83	1	-83	-1	multi-exon	FALSE	canonical	2	11	junction_1	43.0135835213359	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAACTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	79481954	79588848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
tx.3238	chr11	+	7062	13	NIC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	20.8706332758097	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAACTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	79551375	79588848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
tx.3239	chr11	+	6992	13	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	29.6014029322185	35	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAACTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	79551376	79588848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_79551683_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
tx.324	chr1	-	2009	12	NNC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	6	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	75.1113773556607	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGGTTTTTCCTTTTTA	4346	False	NA	NA	False	NA	NA	NA	59158959	59139738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157220_59157439_59158861
tx.3240	chr11	-	3868	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-2	11	-2	-11	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	535	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAACTCATTGAGA	NA	False	NA	NA	False	NA	NA	NA	79853218	79824789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
tx.3241	chr11	-	2865	2	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATTTATTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	79867139	79863321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_79865963_79866915
tx.3242	chr11	+	4401	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-29	1	-29	0	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	3083	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	NA	False	NA	NA	NA	79883902	79924948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
tx.3243	chr11	-	2378	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	13	5	13	-5	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	488	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATGTATTTTGTGGTTT	4501	False	NA	NA	False	NA	NA	NA	79971804	79937323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
tx.3244	chr11	+	7239	23	FSM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	11	16	11	-13	multi-exon	FALSE	canonical	3	47	junction_12	23.2130360212169	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	6010	False	NA	NA	False	NA	NA	NA	79980236	80026604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
tx.3245	chr11	+	7248	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	11	13	11	-13	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	6010	False	NA	NA	False	NA	NA	NA	79980236	80026604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
tx.3246	chr11	-	1303	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	5	1	5	-1	multi-exon	FALSE	canonical	3	265	junction_2	2.16024689946929	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCCTTCTTTGCTTA	NA	False	NA	NA	False	NA	NA	NA	80032996	80027504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
tx.3247	chr11	-	1915	3	NIC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	265	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGCCTTCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	80032972	80027506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_80028894_80030691_80031150_80032902
tx.3248	chr11	+	1846	4	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	17.6131264181639	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTTGAGTTCATTG	NA	False	NA	NA	False	NA	NA	NA	80074667	80090580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_80075082_80084711_80084875_80087698_80087774_80089386
tx.3249	chr11	+	1961	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	20	3	20	-3	multi-exon	FALSE	canonical	3	52	junction_2	3.96074487943871	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTTGAGTTCATTG	NA	False	NA	NA	False	NA	NA	NA	80074696	80090580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
tx.325	chr1	-	1820	12	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	7	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	59.5276170368229	100	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAAGGTTTTTCCTTTT	4347	False	NA	NA	False	NA	NA	NA	59158958	59139740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
tx.3250	chr11	+	3146	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	19	1095	-10	0	multi-exon	FALSE	canonical	3	75	junction_18	152.933077899418	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	80099899	80157638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
tx.3251	chr11	+	3019	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	-6	674	-6	0	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	439	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	80099903	80157638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
tx.3252	chr11	+	3107	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-34	-44	1	-1	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	80099910	80157637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
tx.3253	chr11	-	166	2	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	12	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	80179042	80177018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_80177135_80178992
tx.3254	chr11	-	4538	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	16	0	-3	0	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGGCTTAAATAGTGT	NA	False	NA	NA	False	NA	NA	NA	80268844	80251318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
tx.3255	chr11	+	2334	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-93	-679	1	0	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATACATGATTG	NA	False	NA	NA	False	NA	NA	NA	80274129	80287071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
tx.3256	chr11	+	2242	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	-1	4	-1	-1	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	416	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTTGATACATGATT	NA	False	NA	NA	False	NA	NA	NA	80274127	80287070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
tx.3257	chr11	+	1677	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	6	-57	4	57	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	80319454	80362792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
tx.3258	chr11	+	1561	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	5	1282	5	57	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	476	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	80319455	80362792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
tx.3259	chr11	+	1457	14	NIC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	281.900796684929	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCTTTCTTGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	80319458	80364074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80363918
tx.326	chr1	-	6266	33	ISM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	16774	4	-1331	-4	3prime_fragment	FALSE	canonical	2	89	junction_12	16.6179202500644	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCTGTTCTATGACTGT	NA	False	NA	NA	False	NA	NA	NA	59259616	59202088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533
tx.3260	chr11	+	1654	7	FSM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	191	-212	191	212	multi-exon	FALSE	canonical	3	29	junction_1	3.67045259092421	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACAAAAAAGAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	80701191	80713071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
tx.3261	chr11	+	5915	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173727.8	3636	20	-33	-2246	18	-2	multi-exon	FALSE	canonical	3	52	junction_3	31.7035261983143	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTTTCCCCCCC	NA	False	NA	NA	False	NA	NA	NA	82671985	82695098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
tx.3262	chr11	+	5919	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	52	-1411	18	-1	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTCCCCCCCA	NA	False	NA	NA	False	NA	NA	NA	82671985	82695099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
tx.3263	chr11	-	3491	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	0	-2	0	2	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	2743	False	NA	NA	False	NA	NA	NA	82762036	82694645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
tx.3264	chr11	-	3593	8	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	-20	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	64.8930045599395	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2723	False	NA	NA	False	NA	NA	NA	82762056	82694644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82755078_82755160_82761833
tx.3265	chr11	-	3400	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	2750	False	NA	NA	False	NA	NA	NA	82762029	82694645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
tx.3266	chr11	-	3625	8	FSM	ENSMUSG00000020696.19	ENSMUST00000071152.14	3633	8	9	-1	9	1	multi-exon	FALSE	canonical	3	25	junction_6	57.61306541161	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2752	False	NA	NA	False	NA	NA	NA	82762027	82694646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577_82736722_82761833
tx.3267	chr11	-	2334	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-5	1097	-5	941	multi-exon	TRUE	canonical	3	107	junction_4	12.9099444873581	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTTGTTTATGGACCA	NA	False	NA	NA	False	NA	NA	NA	82781445	82768621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
tx.3268	chr11	-	3384	10	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-24	1	intron_retention	FALSE	canonical	3	35	junction_1	75.8967785064315	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGCAGCTTCTTGTT	8348	False	NA	NA	False	NA	NA	NA	82799192	82791596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
tx.3269	chr11	-	1745	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	37	1	-32	-1	multi-exon	TRUE	canonical	3	193	junction_4	34.6180548590215	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	8340	False	NA	NA	False	NA	NA	NA	82799200	82791594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
tx.327	chr1	-	6337	34	FSM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	1	4	1	-4	multi-exon	FALSE	canonical	2	89	junction_12	16.3968238094348	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCTGTTCTATGACTGT	NA	False	NA	NA	False	NA	NA	NA	59276389	59202088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
tx.3270	chr11	-	2322	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-25	0	intron_retention	FALSE	canonical	3	193	junction_2	37.0264770130781	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8347	False	NA	NA	False	NA	NA	NA	82799193	82791597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
tx.3271	chr11	-	5902	4	NIC	ENSMUSG00000069793.13	novel	5769	5	NA	NA	-13	0	intron_retention	FALSE	canonical	3	11	junction_3	15.8394724940223	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTGTCTTTAAG	8607	False	NA	NA	False	NA	NA	NA	82881976	82869215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_82873704_82875382_82875518_82878064_82879135_82881767
tx.3272	chr11	-	5227	4	ISM	ENSMUSG00000069793.13	ENSMUST00000038211.13	5769	5	3819	2	3126	-2	3prime_fragment	FALSE	canonical	3	41	junction_1	2.05480466765633	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGAATTTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	82878837	82869217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_82872813_82872979_82873704_82875382_82875518_82878064
tx.3273	chr11	-	5750	5	FSM	ENSMUSG00000069793.13	ENSMUST00000138797.2	2128	5	-28	-3594	-28	0	multi-exon	FALSE	canonical	3	11	junction_4	14.1133801762724	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTGTCTTTAAG	8592	False	NA	NA	False	NA	NA	NA	82881991	82869215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_82872813_82872979_82873704_82875382_82875518_82878064_82879135_82881767
tx.3274	chr11	+	497	2	FSM	ENSMUSG00000093483.2	ENSMUST00000176016.2	471	2	-27	1	-4	0	multi-exon	FALSE	canonical	3	381	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTATTTGTTTGGGTA	5865	False	NA	NA	False	NA	NA	NA	83182541	83185455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83182924_83185340
tx.3275	chr11	-	2807	2	ISM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	15	-1	11	1	intron_retention	FALSE	canonical	3	63	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTCTTGAAGTTTT	2441	False	NA	NA	False	NA	NA	NA	83189753	83185899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_83187267_83188313
tx.3276	chr11	-	2388	4	FSM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	1	0	1	0	multi-exon	FALSE	canonical	3	23	junction_3	16.4991582276861	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2427	False	NA	NA	False	NA	NA	NA	83189767	83185900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189537
tx.3277	chr11	-	2272	4	FSM	ENSMUSG00000018733.11	ENSMUST00000018877.9	2729	4	29	428	-6	5	multi-exon	FALSE	canonical	3	9	junction_3	22.7596133534821	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTTGAAGTTTTTCTG	2420	False	NA	NA	False	NA	NA	NA	83189774	83185895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189665
tx.3278	chr11	+	3397	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	214	2014	-6	9	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACCTTATTGTTTTATA	2173	False	NA	NA	False	NA	NA	NA	83193522	83293847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
tx.3279	chr11	+	5365	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-77	-2019	-6	-4	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGTTTGTGGTATG	2173	False	NA	NA	False	NA	NA	NA	83193522	83295857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
tx.328	chr1	+	1664	9	NIC	ENSMUSG00000047361.17	novel	933	5	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	3.23795846174715	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATTTTGTTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	59658555	59675573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_59658605_59664245_59664337_59666615_59666767_59667328_59667444_59669153_59669486_59671372_59671576_59672305_59672479_59673152_59673373_59675243
tx.3280	chr11	+	3166	4	FSM	ENSMUSG00000020684.15	ENSMUST00000108140.10	3156	4	-11	1	-11	0	multi-exon	FALSE	canonical	3	7	junction_2	2.94392028877595	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGTGTCAGCTCTGTT	1425	False	NA	NA	False	NA	NA	NA	83300502	83311864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83300708_83303303_83303661_83308677_83308803_83309385
tx.3281	chr11	+	2073	16	FSM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	-5	0	1	0	multi-exon	FALSE	canonical	3	28	junction_5	25.2651714597168	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	8655	False	NA	NA	False	NA	NA	NA	83363912	83397569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
tx.3282	chr11	+	2082	16	FSM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	-14	0	-8	0	multi-exon	FALSE	canonical	3	28	junction_5	25.2651714597168	13	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	8646	False	NA	NA	False	NA	NA	NA	83363903	83397569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
tx.3283	chr11	+	653	2	ISM	ENSMUSG00000020680.16	ENSMUST00000133170.2	1260	11	15751	0	15751	0	3prime_fragment	FALSE	canonical	3	139	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	NA	False	NA	NA	False	NA	NA	NA	83395603	83397569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_83395931_83397243
tx.3284	chr11	-	916	3	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	50	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGCCATGGTGGCATT	4726	False	NA	NA	False	NA	NA	NA	83458283	83454495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_83455094_83457579_83457647_83458032
tx.3285	chr11	-	821	2	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGCCATGGTGGCATT	4754	False	NA	NA	False	NA	NA	NA	83458255	83454495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_83455094_83458032
tx.3286	chr11	-	1852	4	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	-969	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	12.9614813968157	40	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCATCTTCTGGGTCTTC	NA	False	NA	NA	False	NA	NA	NA	83473161	83464713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83473098
tx.3287	chr11	-	1218	5	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	660	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	25.1445819213603	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTGCCTCTTTTGC	NA	False	NA	NA	False	NA	NA	NA	83473161	83465483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83469214_83469351_83473098
tx.3288	chr11	+	5426	20	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	3	-3	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_8	14.7089962484569	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCGTTGGTTTCTGGGTC	4020	False	NA	NA	False	NA	NA	NA	83644524	83674577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656805_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
tx.3289	chr11	+	4468	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	8	1138	8	595	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAGGGTTATATAAG	4025	False	NA	NA	False	NA	NA	NA	83644529	83673442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
tx.329	chr1	-	1180	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	32	3	-10	-3	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	1423	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAAGCTCCTTTTATT	621	False	NA	NA	False	NA	NA	NA	59709961	59678595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
tx.3290	chr11	+	4662	20	FSM	ENSMUSG00000000976.14	ENSMUST00000125831.8	4067	20	0	-595	0	595	multi-exon	FALSE	canonical	2	8	junction_1	14.4999761199536	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAGGGTTATATAAG	4035	False	NA	NA	False	NA	NA	NA	83644539	83673442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
tx.3291	chr11	+	3115	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	73	6	73	-6	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	470	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGTTTGTAATTGTTT	NA	False	NA	NA	False	NA	NA	NA	83832960	83853908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
tx.3292	chr11	+	5162	14	ISM	ENSMUSG00000034940.16	ENSMUST00000049714.15	3995	22	5	28869	5	20798	5prime_fragment	FALSE	canonical	3	32	junction_6	19.2986494300116	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGGATGTGTGTAATT	1437	False	NA	NA	False	NA	NA	NA	83855258	83902911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
tx.3293	chr11	+	7333	21	FSM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	-48	-3634	0	-16	multi-exon	FALSE	canonical	3	30	junction_2	19.49480700084	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATACACTGTAAAACTGG	1432	False	NA	NA	False	NA	NA	NA	83855253	83935388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
tx.3294	chr11	+	5146	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	5	666	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	19.4608741731395	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGACTG	1437	False	NA	NA	False	NA	NA	NA	83855258	83932903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
tx.3295	chr11	+	4633	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	22	167	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	16.6746919453981	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATGATGCTCTGTCCTGG	1454	False	NA	NA	False	NA	NA	NA	83855275	83932404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
tx.3296	chr11	+	4858	21	NIC	ENSMUSG00000034940.16	novel	3651	21	NA	NA	5	678	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	16.4392061852147	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACTGCAGAGGAGCCAG	1437	False	NA	NA	False	NA	NA	NA	83855258	83932915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
tx.3297	chr11	+	5464	15	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	1	20793	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	19.5830257610816	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTGGGGATGTGTG	1433	False	NA	NA	False	NA	NA	NA	83855254	83902906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
tx.3298	chr11	-	1457	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	59	junction_2	13.5	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTATTAATCATTTTG	NA	False	NA	NA	False	NA	NA	NA	83959193	83938866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_83940137_83941657_83941747_83959095
tx.3299	chr11	-	2159	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	-8	0	-8	0	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	742	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	NA	False	NA	NA	NA	84020434	83969745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
tx.33	chr1	-	3982	3	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	5.5	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTTAACTCTGC	-15	True	NA	NA	False	NA	NA	NA	10038152	10030387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_10033747_10037323_10037743_10037948
tx.330	chr1	+	2006	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-33	7534	-1	0	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	1552	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	59724134	59750669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
tx.3300	chr11	+	9206	56	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_51	41.1637969800914	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	NA	False	NA	NA	NA	84070625	84292477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
tx.3301	chr11	+	9160	55	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_50	41.0147853831693	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	NA	False	NA	NA	NA	84070624	84292477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_84070753_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
tx.3302	chr11	+	9192	55	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-41	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_50	39.807290417339	45	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	NA	False	NA	NA	NA	84070615	84292477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
tx.3303	chr11	+	9142	54	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_49	39.579158530227	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCGTTTGTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	84070617	84292476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_84070753_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
tx.3304	chr11	-	1807	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	8	7	8	-7	multi-exon	FALSE	canonical	3	481	junction_8	26.3136793744665	357	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTCACTGTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	84404340	84313687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
tx.3305	chr11	-	2476	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_4	44.51404272811	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGGAGTTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	84710340	84703886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
tx.3306	chr11	-	2632	4	ISM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	-12	0	-12	0	intron_retention	FALSE	canonical	3	90	junction_1	8.65383665716478	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGGAGTTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	84710353	84703886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425
tx.3307	chr11	-	1448	7	FSM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	-64	-130	-34	130	multi-exon	FALSE	canonical	3	39	junction_6	7.19760762722973	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACCTTCAGAAGTATCT	NA	False	NA	NA	False	NA	NA	NA	84719854	84711551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716404_84719576
tx.3308	chr11	-	2725	14	NIC	ENSMUSG00000020530.15	novel	3056	14	NA	NA	-1	-219	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	144.390291269939	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAATGTGGTGTACATGT	NA	False	NA	NA	False	NA	NA	NA	84761616	84723405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761515
tx.3309	chr11	-	2732	14	NNC	ENSMUSG00000020530.15	novel	3056	14	NA	NA	-2	-219	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_13	141.589121368631	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAATGTGGTGTACATGT	NA	False	NA	NA	False	NA	NA	NA	84761607	84723405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761499
tx.331	chr1	+	5559	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	-26	-1	-26	1	multi-exon	FALSE	canonical	3	104	junction_1	7.88177955664784	192	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTCTTTCTCTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	59952138	60024506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
tx.3310	chr11	-	2810	14	FSM	ENSMUSG00000020530.15	ENSMUST00000168434.8	3056	14	27	219	-1	-219	multi-exon	FALSE	canonical	3	67	junction_13	138.817874810357	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAATGTGGTGTACATGT	NA	False	NA	NA	False	NA	NA	NA	84761616	84723405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
tx.3311	chr11	-	2753	13	FSM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	-1	-224	-1	-221	multi-exon	FALSE	canonical	3	231	junction_7	87.5523256242929	479	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	NA	False	NA	NA	NA	84761029	84723407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
tx.3312	chr11	-	2774	14	NIC	ENSMUSG00000020530.15	novel	2478	15	NA	NA	1	-220	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	144.390291269939	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAATGTGGTGTACATG	NA	False	NA	NA	False	NA	NA	NA	84761614	84723406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
tx.3313	chr11	-	1518	6	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	61	550	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	192.335748107314	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTGTTTTGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	84760967	84742657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
tx.3314	chr11	+	3733	24	NIC	ENSMUSG00000020527.15	novel	3651	24	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	31.3266828534579	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	84771150	84801948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
tx.3315	chr11	+	4413	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	12	-4	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_2	32.2787856029312	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGCCAACCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	84771007	84801944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
tx.3316	chr11	+	3811	25	FSM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	176	104	14	0	multi-exon	FALSE	canonical	3	91	junction_6	19.4264996561112	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	84771149	84801948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
tx.3317	chr11	-	982	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	11	5	-6	-5	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTATTGTTCCCTTAG	NA	False	NA	NA	False	NA	NA	NA	84807181	84801780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
tx.3318	chr11	-	6968	34	FSM	ENSMUSG00000000804.15	ENSMUST00000108075.9	7053	34	85	0	15	0	multi-exon	FALSE	canonical	3	28	junction_26	11.8228429036788	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTCTCTTTGTGATCCT	7570	False	NA	NA	False	NA	NA	NA	85030779	84875267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
tx.3319	chr11	-	202	2	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGAAGCTGTGCTGCA	NA	False	NA	NA	False	NA	NA	NA	85097005	85077770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_85077922_85096954
tx.332	chr1	-	2092	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	8	7912	8	-829	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	630	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCTGTCTACATTTTA	NA	False	NA	NA	False	NA	NA	NA	60137059	60116855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
tx.3320	chr11	-	6435	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	16	12	16	-12	multi-exon	TRUE	canonical	3	360	junction_12	22.6180544894756	685	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTAGTGTATGCTTCCG	NA	False	NA	NA	False	NA	NA	NA	85125940	85078099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
tx.3321	chr11	+	4144	3	NIC	ENSMUSG00000085628.5	novel	635	4	NA	NA	30	3647	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	1.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTGTCTAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	85126026	85132777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_85126159_85128236_85128341_85128869
tx.3322	chr11	+	2898	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	2	-1	2	1	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGGCGTTTTGTTGGT	7708	False	NA	NA	False	NA	NA	NA	85202071	85237893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
tx.3323	chr11	+	2500	22	ISM	ENSMUSG00000059439.16	ENSMUST00000092821.10	2769	24	-45	241353	0	-19047	5prime_fragment	FALSE	canonical	3	82	junction_16	16.0315731563836	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTACACAGCATTTC	3478	False	NA	NA	False	NA	NA	NA	85243992	85474823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722
tx.3324	chr11	-	6958	20	NIC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	-12	7	combination_of_known_junctions	FALSE	canonical	3	7	junction_19	19.7350876413186	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCGATGACTTATCTACA	NA	False	NA	NA	False	NA	NA	NA	86092004	85948956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091899
tx.3325	chr11	-	6922	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	11	-2	11	2	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCCGATGACTTAT	NA	False	NA	NA	False	NA	NA	NA	86092008	85948961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
tx.3326	chr11	+	2788	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	-10	1645	-10	-1645	multi-exon	FALSE	canonical	3	24	junction_1	0	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTCTCTGTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	86092185	86100373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_86092379_86097778
tx.3327	chr11	-	6802	24	FSM	ENSMUSG00000018068.14	ENSMUST00000108039.8	4369	24	-1026	-1407	3	0	multi-exon	FALSE	canonical	3	154	junction_20	24.6346460193577	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	86148398	86101506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848
tx.3328	chr11	-	5915	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	-11	2	4	-2	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGCTTTTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	86148387	86101508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
tx.3329	chr11	-	5994	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	0	intron_retention	FALSE	canonical	3	33	junction_24	49.1211726244397	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	86148388	86101506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
tx.333	chr1	-	1530	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	1251	-29	-1251	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGTCTCACTGTTA	NA	False	NA	NA	False	NA	NA	NA	60137334	60117277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
tx.3330	chr11	-	5623	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_24	44.6783061638047	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTAGCTTTTATGTT	NA	False	NA	NA	False	NA	NA	NA	86148398	86101510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148330
tx.3331	chr11	-	5905	27	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_24	54.4039243276486	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGCTTTTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	86148390	86101508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029_86148242_86148330
tx.3332	chr11	-	5828	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	50	junction_25	39.3049615188719	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGCTTTTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	86148389	86101508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148330
tx.3333	chr11	-	6647	14	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	66418	0	-12192	0	3prime_fragment	TRUE	canonical	3	49	junction_2	10.9587715806204	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTGTCTCATTCTGT	NA	False	NA	NA	False	NA	NA	NA	86182010	86157858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868
tx.3334	chr11	-	9588	25	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	28307	0	2888	0	3prime_fragment	FALSE	canonical	3	33	junction_16	14.3301837624877	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTGTCTCATTCTGT	NA	False	NA	NA	False	NA	NA	NA	86220121	86157858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993
tx.3335	chr11	-	7163	15	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	58824	3	-19786	-3	3prime_fragment	FALSE	canonical	3	47	junction_14	11.8019368870416	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGGTGTCTCATTC	NA	False	NA	NA	False	NA	NA	NA	86189604	86157861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105
tx.3336	chr11	-	11251	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-709	4	-709	-4	multi-exon	FALSE	canonical	3	30	junction_26	15.4932381399703	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGTGGTGTCTCATT	8447	False	NA	NA	False	NA	NA	NA	86249137	86157862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
tx.3337	chr11	+	1977	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	-3	2478	-3	-2478	multi-exon	FALSE	canonical	3	265	junction_2	21.9146070008111	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGGACCTGTTATGT	NA	False	NA	NA	False	NA	NA	NA	86375479	86387373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
tx.3338	chr11	-	5665	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	147	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	60.8554661070149	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGTGGAATCTAGTT	NA	False	NA	NA	False	NA	NA	NA	86435600	86389549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_86393807_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
tx.3339	chr11	-	5761	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	9	-5	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	86.7892466457299	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGATAACAGTTATAAA	NA	False	NA	NA	False	NA	NA	NA	86435622	86389701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407814_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
tx.334	chr1	+	5445	16	NIC	ENSMUSG00000026017.14	novel	2763	18	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	2.30554886210541	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTTTTTGAAAATTTGC	NA	False	NA	NA	False	NA	NA	NA	60137415	60193115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_60137467_60144469_60144587_60147241_60147360_60148485_60148609_60164009_60164071_60165078_60165194_60167147_60167233_60171002_60171193_60175422_60175544_60178358_60178503_60180493_60180728_60183152_60183316_60185267_60185332_60186526_60186640_60186991_60187362_60189739
tx.3340	chr11	-	5396	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	4	-143	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	79.1358887540216	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAGAAGTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	86435596	86389839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
tx.3341	chr11	-	5353	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	33	145	2	-145	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAAATAGAAGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	86435598	86389841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
tx.3342	chr11	-	2345	5	ISM	ENSMUSG00000020516.16	ENSMUST00000058286.9	3250	10	-1	4162	-1	1499	5prime_fragment	FALSE	canonical	3	250	junction_4	14.2543852901484	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTGTTTGTTTATTTAC	NA	False	NA	NA	False	NA	NA	NA	86435601	86408970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
tx.3343	chr11	+	2169	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	-20	-278	-20	278	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTCATATAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	86435796	86458464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
tx.3344	chr11	-	1956	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	1	830	1	235	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	642	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTCCGTTTTCTTTA	9873	False	NA	NA	False	NA	NA	NA	86574661	86475520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
tx.3345	chr11	+	713	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	58	2267	58	-2267	multi-exon	FALSE	canonical	3	249	junction_1	0	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTCCCATGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	86574868	86581016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_86574950_86580384
tx.3346	chr11	-	6212	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	5	302	5	2	multi-exon	TRUE	canonical	3	813	junction_25	122.673691341487	1741	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGAATTGCAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	86648386	86585478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
tx.3347	chr11	-	2800	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	114	899	114	-899	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	296	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGGCCTTCTTATTGCT	8641	False	NA	NA	False	NA	NA	NA	86698458	86660570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
tx.3348	chr11	-	4879	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	-32	0	-32	0	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGAGAATGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	86884565	86827250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
tx.3349	chr11	-	2383	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	-47	0	-47	0	multi-exon	FALSE	canonical	3	37	junction_6	8.73053390247253	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGATTCCAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	86964935	86924692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
tx.335	chr1	+	2228	13	FSM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	-5	0	-5	0	multi-exon	FALSE	canonical	3	86	junction_1	9.38083151964686	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	60382476	60427219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
tx.3350	chr11	-	3202	4	FSM	ENSMUSG00000020495.14	ENSMUST00000020801.14	3218	4	2	14	2	-10	multi-exon	FALSE	canonical	3	76	junction_2	5.65685424949238	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATACAAAATGTATACTTG	NA	False	NA	NA	False	NA	NA	NA	86977598	86968571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86968977_86970991_86971865_86974425_86974572_86975820
tx.3351	chr11	-	3893	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-70	1	-70	-1	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCCAGAGTTCATGTT	NA	False	NA	NA	False	NA	NA	NA	86999604	86979979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
tx.3352	chr11	+	3022	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	15	0	-2	0	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTCCATGTTATATT	NA	False	NA	NA	False	NA	NA	NA	87000074	87015461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
tx.3353	chr11	+	3563	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-2	30189	at_least_one_novel_splicesite	TRUE	canonical	3	225	junction_24	67.5794671109502	290	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTCATAATTTGT	1914	False	NA	NA	False	NA	NA	NA	87017900	87141698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
tx.3354	chr11	+	4433	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	-1	1200	-1	-1200	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	455	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1915	False	NA	NA	False	NA	NA	NA	87017901	87110309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
tx.3355	chr11	+	4314	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-5	-1200	combination_of_known_junctions	TRUE	canonical	3	6	junction_19	107.708063112769	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1911	False	NA	NA	False	NA	NA	NA	87017897	87110309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107374_87109077
tx.3356	chr11	+	5658	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_23	103.32070577559	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTTGTTGTTTTAT	1915	False	NA	NA	False	NA	NA	NA	87017901	87111508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107400_87109077
tx.3357	chr11	-	6396	7	FSM	ENSMUSG00000046442.5	ENSMUST00000055438.5	6344	7	-47	-5	-47	5	multi-exon	FALSE	canonical	0	0	junction_6	1.69967317119759	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGGTTATTTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	87249896	87117726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_87122755_87127955_87128050_87128257_87128402_87131428_87131618_87135094_87135295_87139757_87139877_87249274
tx.3358	chr11	-	2011	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	25	1908	8	38	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTATATGTATCTGT	NA	False	NA	NA	False	NA	NA	NA	87295324	87269378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
tx.3359	chr11	+	4826	31	FSM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	-63	0	-63	0	multi-exon	FALSE	canonical	1	19	junction_12	24.6584671056414	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	87295827	87446649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
tx.336	chr1	+	5870	10	FSM	ENSMUSG00000026782.16	ENSMUST00000187709.7	1671	10	-201	-3998	-17	-2	multi-exon	FALSE	canonical	3	29	junction_7	51.9553464495364	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAGTGTCTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	60448760	60520315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
tx.3360	chr11	-	1111	2	Antisense	novelGene_ENSMUSG00000010342.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTTATCGTGAATCT	NA	False	NA	NA	False	NA	NA	NA	87344373	87343045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr11_-_87343868_87344084
tx.3361	chr11	+	5743	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	4	6	4	-6	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTTGTTGGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	87482991	87507122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
tx.3362	chr11	+	5854	20	NIC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	22	-6	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	38.4952419983262	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTTGTTGGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	87483009	87507122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_87483077_87483723_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
tx.3363	chr11	+	5839	18	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	23.4398294690113	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	87486477	87507123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
tx.3364	chr11	+	5520	15	NNC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	4029	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	33.9546516304753	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTTGGGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	87490506	87507125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_87490701_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
tx.3365	chr11	+	3605	4	ISM	ENSMUSG00000018401.18	ENSMUST00000092802.12	5525	18	18914	6	15481	-6	3prime_fragment	FALSE	canonical	3	136	junction_2	8.9566858950296	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTTGTTGGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	87501958	87507122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_87503143_87504247_87504359_87504597_87504687_87504901
tx.3366	chr11	+	3666	5	NIC	ENSMUSG00000070345.4	novel	4158	6	NA	NA	-33	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.32290411644765	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTTGTCTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	87507956	87550365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_87508732_87513570_87513946_87522417_87522516_87528895_87529071_87548122
tx.3367	chr11	+	719	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	-12	-1	-12	1	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGGTACTGAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	87628365	87634444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
tx.3368	chr11	+	2331	17	NNC	ENSMUSG00000034121.13	novel	688	4	NA	NA	-5044	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	42.5595171495166	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	1412	False	NA	NA	False	NA	NA	NA	87738996	87754628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_87739055_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
tx.3369	chr11	+	2424	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5026	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	31.5170080957562	61	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1430	False	NA	NA	False	NA	NA	NA	87739014	87754629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
tx.337	chr1	+	5750	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	17	1	17	-1	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGTGTCTTGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	60448794	60520316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
tx.3370	chr11	+	2498	18	FSM	ENSMUSG00000034121.13	ENSMUST00000038196.7	2499	18	1	0	1	0	multi-exon	FALSE	canonical	3	107	junction_1	22.9555008070187	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6457	False	NA	NA	False	NA	NA	NA	87744041	87754629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
tx.3371	chr11	+	2904	17	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	148	junction_4	16.8336298447483	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6458	False	NA	NA	False	NA	NA	NA	87744042	87754629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
tx.3372	chr11	-	2439	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	30	7	30	-7	multi-exon	FALSE	canonical	3	615	junction_2	8	364	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	87878329	87870357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_87872397_87874697_87874837_87878068
tx.3373	chr11	-	2395	3	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44258	-7	intron_retention	FALSE	canonical	3	52	junction_2	289.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	87922617	87870357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_87872397_87874697_87874837_87922400
tx.3374	chr11	-	2616	4	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44298	-7	intron_retention	FALSE	canonical	3	7	junction_2	286.479008344804	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	87922657	87870357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_87872397_87874697_87874837_87892657_87892839_87922400
tx.3375	chr11	-	3940	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	-3491	1738	30	-1108	multi-exon	FALSE	canonical	3	631	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	87878329	87872088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_87872397_87874697
tx.3376	chr11	+	2116	4	NIC	ENSMUSG00000018379.18	novel	896	4	NA	NA	-46	3	intron_retention	FALSE	canonical	3	275	junction_3	562.44999777758	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	6549	False	NA	NA	False	NA	NA	NA	87938497	87942319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_87938859_87939315_87939501_87939868_87940922_87941802
tx.3377	chr11	+	3460	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	-39	-473	-39	473	multi-exon	FALSE	canonical	3	1310	junction_1	135	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTCGCCAAACTGTT	6556	False	NA	NA	False	NA	NA	NA	87938504	87942789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87938859_87939315_87939501_87939868
tx.3378	chr11	+	1911	5	NIC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-37	3	intron_retention	FALSE	canonical	3	275	junction_4	487.699190075194	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	6558	False	NA	NA	False	NA	NA	NA	87938506	87942319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87941802
tx.3379	chr11	+	4643	2	FSM	ENSMUSG00000018379.18	ENSMUST00000171976.2	645	2	-44	-3954	-37	-975	multi-exon	FALSE	canonical	3	1310	junction_1	0	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACTAGTGAGCACAGC	6558	False	NA	NA	False	NA	NA	NA	87938506	87943606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87938859_87939315
tx.338	chr1	+	6026	10	NIC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	-75	0	intron_retention	FALSE	canonical	3	7	junction_6	60.5764489949643	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTGTCTTGTAGAATC	NA	False	NA	NA	False	NA	NA	NA	60448702	60520317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60489229_60489413_60492762_60492922_60509824_60509999_60515898
tx.3380	chr11	+	3247	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	310	1805	-35	460	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCATAGAGTGTTCTG	6560	False	NA	NA	False	NA	NA	NA	87938508	87942776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
tx.3381	chr11	+	2895	2	FSM	ENSMUSG00000018379.18	ENSMUST00000132983.3	759	2	-1694	-442	0	3	multi-exon	FALSE	canonical	3	275	junction_1	0	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	6595	False	NA	NA	False	NA	NA	NA	87938543	87942319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87940922_87941802
tx.3382	chr11	+	4678	3	ISM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	1132	9	-62	-9	3prime_fragment	FALSE	canonical	3	1111	junction_2	234.5	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACCTTTATTGAGATTT	7382	False	NA	NA	False	NA	NA	NA	87939330	87944572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_87939501_87939868_87940042_87940237
tx.3383	chr11	+	4510	2	ISM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	1671	6	-368	-6	3prime_fragment	FALSE	canonical	3	1111	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTATTGAGATTTAAG	7921	False	NA	NA	False	NA	NA	NA	87939869	87944575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_87940042_87940237
tx.3384	chr11	+	4592	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-19	10	-19	-10	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGTTATGATGGACTG	NA	False	NA	NA	False	NA	NA	NA	87959085	87975545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
tx.3385	chr11	+	6657	6	NNC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-19	-9	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	40.4257343779924	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTTATGATGGACTGT	NA	False	NA	NA	False	NA	NA	NA	87959085	87975546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87970159
tx.3386	chr11	+	4629	6	NIC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-30	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	44.5268458348444	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGGACTGTTAATGCC	NA	False	NA	NA	False	NA	NA	NA	87959074	87975553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_87959260_87963882_87964578_87965487_87965552_87966998_87967201_87969228_87969382_87972223
tx.3387	chr11	+	3184	11	FSM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	-11	7	-11	-7	multi-exon	FALSE	canonical	2	4	junction_1	5.85234995535981	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGATGTGGCCAGCGGC	3324	False	NA	NA	False	NA	NA	NA	87989960	88084959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
tx.3388	chr11	+	1303	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	28	1	5	-1	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTCTCTATTTGTGG	NA	False	NA	NA	False	NA	NA	NA	88095241	88102332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
tx.339	chr1	+	5809	9	NNC	ENSMUSG00000026782.16	novel	5768	9	NA	NA	-45	-1	intron_retention	FALSE	canonical	3	27	junction_5	45.7295036054405	47	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGTGTCTTGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	60448732	60520316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60492762_60492922_60509824_60509999_60515898
tx.3390	chr11	-	3720	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	36	2	36	-2	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	1109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	88755376	88721619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
tx.3391	chr11	-	3421	10	ISM	ENSMUSG00000018428.16	ENSMUST00000107903.8	3721	11	5783	2	-1222	-2	3prime_fragment	FALSE	canonical	3	816	junction_2	51.9631873493743	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	88736546	88721619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084
tx.3392	chr11	-	3071	2	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	88787238	88781073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_88783940_88787033
tx.3393	chr11	-	1210	3	ISM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	24917	0	24917	0	3prime_fragment	FALSE	canonical	3	2674	junction_1	110.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	5919	False	NA	NA	False	NA	NA	NA	88821374	88814845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_88815551_88819990_88820155_88821033
tx.3394	chr11	-	2046	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	51	0	51	0	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	2643	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	5252	False	NA	NA	False	NA	NA	NA	88846240	88814845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
tx.3395	chr11	+	1016	2	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	2	-17544	intron_retention	FALSE	canonical	3	1774	junction_1	0	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTCCTATTTATTTA	9433	False	NA	NA	False	NA	NA	NA	88861079	88864236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_88861306_88863446
tx.3396	chr11	+	2605	7	FSM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	2	0	2	0	multi-exon	FALSE	canonical	3	336	junction_2	22.1616535684702	365	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	NA	False	NA	NA	False	NA	NA	NA	88864762	88882439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
tx.3397	chr11	+	5547	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	43	0	43	0	multi-exon	TRUE	canonical	3	172	junction_5	154.213123630902	211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	88890244	88911119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
tx.3398	chr11	-	4952	11	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-26	-389	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	23.3443783382638	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGGTGGGAGTGTTA	3806	False	NA	NA	False	NA	NA	NA	88951600	88928796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_88931845_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
tx.3399	chr11	-	4841	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	-25	392	-25	-392	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGAGGTGGGAGTG	3807	False	NA	NA	False	NA	NA	NA	88951599	88928799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
tx.34	chr1	-	4009	3	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	6	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTTAACTCTGC	-20	True	NA	NA	False	NA	NA	NA	10038157	10030387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_10033747_10037323_10037743_10037926
tx.340	chr1	-	2223	14	NIC	ENSMUSG00000026014.16	novel	2241	16	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	4.5573271518765	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTTAAAGCTTGTTG	NA	False	NA	NA	False	NA	NA	NA	60606011	60522343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_60522500_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
tx.3400	chr11	-	6642	9	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-13	-385	intron_retention	FALSE	canonical	3	65	junction_3	5.88960949469487	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTGGGAGTGTTAATTT	3819	False	NA	NA	False	NA	NA	NA	88951587	88928792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88943373_88946183_88946344_88950756
tx.3401	chr11	-	4688	11	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	4	-556	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	22.2836262758107	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACACTGTGGGATTTTT	3836	False	NA	NA	False	NA	NA	NA	88951570	88928963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939674_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
tx.3402	chr11	-	1943	6	FSM	ENSMUSG00000020553.9	ENSMUST00000020864.9	2723	6	26	754	26	-754	multi-exon	FALSE	canonical	3	31	junction_1	5.78273291792038	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTCTCCCTCTTACC	NA	False	NA	NA	False	NA	NA	NA	89893694	89874244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_89875583_89876918_89876987_89878021_89878194_89879520_89879601_89881896_89882015_89893527
tx.3403	chr11	+	2694	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	-33	16	-13	-16	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGTCTGGAGCATAT	NA	False	NA	NA	False	NA	NA	NA	90140268	90169399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
tx.3404	chr11	-	5983	18	FSM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	2	0	2	0	multi-exon	FALSE	canonical	2	8	junction_15	2.25532817796245	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCTAGATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	90528908	90367317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_90371541_90385427_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
tx.3405	chr11	+	1223	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	8	-7	8	7	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACAACTTGATTTCTAT	NA	False	NA	NA	False	NA	NA	NA	90529006	90535764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
tx.3406	chr11	-	2076	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	7	2225	1	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	206	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTTGTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	90578426	90536515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
tx.3407	chr11	-	1892	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	14	707	14	-707	multi-exon	TRUE	canonical	3	770	junction_1	49.2161035848126	938	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTACATGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	93776578	93750775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
tx.3408	chr11	+	5895	17	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-601	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	44.0468500576375	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCAATTTTTCAACA	NA	False	NA	NA	False	NA	NA	NA	93776076	93837810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_93776889_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
tx.3409	chr11	+	5266	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107853.8	5245	16	-18	-3	-18	3	multi-exon	FALSE	canonical	3	14	junction_1	36.201657420621	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATTTTTCAACATTGA	NA	False	NA	NA	False	NA	NA	NA	93776659	93837814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_93776889_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
tx.341	chr1	-	8172	14	FSM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	-68	1920	-68	-976	multi-exon	FALSE	canonical	3	5	junction_1	7.94731170356426	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATACCAAAACCTGACGT	NA	False	NA	NA	False	NA	NA	NA	60606006	60523370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_60529481_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
tx.3410	chr11	+	5295	16	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	37.4358117315492	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	NA	False	NA	NA	NA	93776680	93837805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_93776948_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
tx.3411	chr11	+	5445	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-37	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	40.9622062851844	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCAATTTTTCAACA	NA	False	NA	NA	False	NA	NA	NA	93776995	93837810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
tx.3412	chr11	+	3265	16	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-43	-2106	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	32.6657142718308	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGCCATGGGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	93776989	93825921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706
tx.3413	chr11	+	5383	18	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	41.2407061984984	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	NA	False	NA	NA	NA	93776995	93837811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
tx.3414	chr11	+	5336	17	NIC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	31.7736132663567	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	NA	False	NA	NA	NA	93776992	93837811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
tx.3415	chr11	+	5279	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107854.9	5232	16	-47	0	-35	0	multi-exon	FALSE	canonical	3	19	junction_1	35.1887608319601	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	NA	False	NA	NA	NA	93776997	93837811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
tx.3416	chr11	-	658	4	FSM	ENSMUSG00000020857.12	ENSMUST00000072566.5	734	4	79	-3	79	0	multi-exon	FALSE	canonical	3	6715	junction_3	620.302256072706	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	NA	False	NA	NA	NA	93846530	93840639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320
tx.3417	chr11	-	672	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	340	0	-136	0	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	1281	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	NA	False	NA	NA	NA	93846745	93840639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
tx.3418	chr11	-	696	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	237	2248	-12	245	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	956	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGTACAGCTCTGCA	622	False	NA	NA	False	NA	NA	NA	93859110	93850052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
tx.3419	chr11	+	7387	29	FSM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-47	0	-35	0	multi-exon	FALSE	canonical	3	49	junction_7	9.62220009633335	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAAGTCTAGTGTGGT	629	False	NA	NA	False	NA	NA	NA	93886881	94016911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
tx.342	chr1	-	4668	13	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	-50	8622	-50	-238	5prime_fragment	FALSE	canonical	3	25	junction_2	4.25163367294137	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTGCTGGACTTCTGT	NA	False	NA	NA	False	NA	NA	NA	60605988	60530072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
tx.3420	chr11	+	6979	26	FSM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	-137	-2	13	2	multi-exon	FALSE	canonical	3	8	junction_1	14.9277727742621	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTCTAGTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	93934956	94016913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
tx.3421	chr11	+	348	3	ISM	ENSMUSG00000086003.8	ENSMUST00000155965.2	473	4	5054	2	2896	-2	3prime_fragment	FALSE	canonical	3	102	junction_1	30	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTTTACCTGCTTG	NA	False	NA	NA	False	NA	NA	NA	94029381	94046600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_94029490_94046281_94046324_94046402
tx.3422	chr11	+	2304	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	252	junction_1	0	376	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATCCTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	94102263	94106321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_94102558_94104311
tx.3423	chr11	-	4307	4	ISM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	24838	-3167	-83	-4	3prime_fragment	FALSE	canonical	3	229	junction_1	29.2384830127845	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACTTGGTGTAGGTA	NA	False	NA	-89	True	NA	NA	NA	94187976	94178719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709
tx.3424	chr11	-	1994	12	FSM	ENSMUSG00000020863.16	ENSMUST00000166312.8	5244	12	3	3247	3	2	multi-exon	FALSE	canonical	3	40	junction_1	82.4268270539502	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATTGTCTGTGTCATTG	NA	False	NA	NA	False	NA	NA	NA	94212781	94181962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_94182405_94183752_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
tx.3425	chr11	-	1948	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	25	77	-5	1	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGATTGTCTGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	94212789	94181963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
tx.3426	chr11	-	3447	10	FSM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	31	0	1	0	multi-exon	FALSE	canonical	3	230	junction_9	26.1850018328748	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	94212783	94181964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
tx.3427	chr11	+	1444	5	FSM	ENSMUSG00000020864.14	ENSMUST00000021227.6	1215	5	-224	-5	17	5	multi-exon	FALSE	canonical	3	24	junction_4	194.973075064225	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAATTTTAATCCAT	4023	False	NA	NA	False	NA	NA	NA	94218855	94230340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230065
tx.3428	chr11	+	3466	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	20	1	8	-1	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	669	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCCATTCTCTCTCGT	4014	False	NA	NA	False	NA	NA	NA	94218846	94232666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
tx.3429	chr11	+	7766	4	NIC	ENSMUSG00000020864.14	novel	3487	5	NA	NA	18	489	intron_retention	FALSE	canonical	3	454	junction_2	20.8539897594894	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGTTTTTACATAACTC	4024	False	NA	NA	False	NA	NA	NA	94218856	94231463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_94224876_94225253_94225734_94229165_94229348_94230378
tx.343	chr1	-	2713	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	24	1	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTAAAGTGTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	63215928	63182753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
tx.3430	chr11	-	3493	4	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40856	-2328	-934	2328	intron_retention	FALSE	canonical	3	69	junction_3	10.6249183003395	28	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTAAGTTTCTTTGGA	1	True	NA	NA	False	NA	NA	NA	94242946	94231792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624
tx.3431	chr11	-	1110	5	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40789	0	-1001	0	3prime_fragment	FALSE	canonical	3	20	junction_4	28.5164426252645	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	NA	False	NA	NA	False	NA	NA	NA	94243013	94234120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905
tx.3432	chr11	-	4289	8	NIC	ENSMUSG00000039096.11	novel	4203	9	NA	NA	-198	-4	intron_retention	FALSE	canonical	0	0	junction_6	14.1997413026162	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGACCTGCGTAGCTCCT	3460	False	NA	NA	False	NA	NA	NA	94439816	94430627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94439003_94439190_94439296
tx.3433	chr11	-	4170	9	FSM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	-36	9	20	-9	multi-exon	FALSE	canonical	3	12	junction_3	10.3319891598859	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGACAGACCTGCGTAG	3215	False	NA	NA	False	NA	NA	NA	94440061	94430632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
tx.3434	chr11	-	2219	8	ISM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	236	2066	-171	-2066	3prime_fragment	FALSE	canonical	3	12	junction_3	10.4295498562537	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCCAAGGCCACTTG	3487	False	NA	NA	False	NA	NA	NA	94439789	94432689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296
tx.3435	chr11	-	3157	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	-3	0	-3	0	multi-exon	FALSE	canonical	3	47	junction_6	8.37615663654877	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATTGGACTGTAACTC	7282	False	NA	NA	False	NA	NA	NA	94492700	94447927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
tx.3436	chr11	+	2834	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	3	0	3	0	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	4650	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	94520595	94536042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
tx.3437	chr11	-	2234	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	210	0	-83	0	multi-exon	TRUE	canonical	3	178	junction_8	32.4422563950167	236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4613	False	NA	NA	False	NA	NA	NA	94544580	94535821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
tx.3438	chr11	-	2175	8	ISM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	2939	2	-319	-2	3prime_fragment	FALSE	canonical	3	186	junction_6	30.6860335178925	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGCTTGGAGGAAG	7342	False	NA	NA	False	NA	NA	NA	94541851	94535823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048
tx.3439	chr11	-	2294	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	78.9567782999419	50	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4610	False	NA	NA	False	NA	NA	NA	94544583	94535821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
tx.344	chr1	-	2626	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	37	-2	8	2	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	540	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTAAAGTGTGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	63215944	63182752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
tx.3440	chr11	+	745	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	9	2	0	-2	multi-exon	FALSE	canonical	3	766	junction_3	47.8632310744781	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGGAAAGGGACAGGAC	NA	False	NA	NA	False	NA	NA	NA	94544601	94550913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
tx.3441	chr11	+	850	4	FSM	ENSMUSG00000024414.14	ENSMUST00000125148.2	439	4	-29	-382	-9	10	multi-exon	FALSE	canonical	3	93	junction_1	344.111416065592	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGACAGGTGGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	94544827	94550925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_94544987_94547312_94547445_94547808_94547877_94550434
tx.3442	chr11	-	3251	2	ISM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	10638	-1512	925	1512	3prime_fragment	FALSE	canonical	3	122	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGCTTTGTTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	94557703	94553164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_94555736_94557023
tx.3443	chr11	-	4707	10	ISM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	6719	-1512	-2604	1512	3prime_fragment	FALSE	canonical	3	112	junction_7	14.0317101198995	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGCTTTGTTTTAATTT	8924	False	NA	NA	False	NA	NA	NA	94561622	94553164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133
tx.3444	chr11	-	3990	10	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	23	4	intron_retention	FALSE	canonical	3	112	junction_6	13.3499895963339	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCCTTGTTTGCTTCCT	2228	False	NA	NA	False	NA	NA	NA	94568318	94554672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
tx.3445	chr11	-	3393	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	49	0	49	0	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2254	False	NA	NA	False	NA	NA	NA	94568292	94554676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
tx.3446	chr11	-	2517	5	NNC	ENSMUSG00000075611.6	novel	375	3	NA	NA	-3239	1844	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.58113883008419	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTTTCTCTGTA	2104	False	NA	NA	False	NA	NA	NA	94651828	94645957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_94647982_94648187_94648387_94648522_94648622_94649100_94649124_94651656
tx.3447	chr11	+	4413	10	FSM	ENSMUSG00000038976.13	ENSMUST00000038696.12	4508	10	93	2	93	-2	multi-exon	FALSE	canonical	3	26	junction_2	8.0691456246068	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGTCGCCTGGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	94881953	94897723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_94883745_94887360_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
tx.3448	chr11	+	1897	3	ISM	ENSMUSG00000038976.13	ENSMUST00000107748.2	3095	9	8523	-1	8523	1	3prime_fragment	FALSE	canonical	3	45	junction_1	3.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTCGCCTGGTTTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	94895412	94897726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_94895617_94895846_94895944_94896130
tx.3449	chr11	-	2284	11	FSM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	-39	1	-39	-1	multi-exon	FALSE	canonical	3	33	junction_1	6.12290780593665	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTGGCTTCCTTG	6035	False	NA	NA	False	NA	NA	NA	94932219	94917084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
tx.345	chr1	+	807	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	302	830	-2	0	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	720	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	NA	False	NA	NA	NA	63216285	63218815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
tx.3450	chr11	-	4957	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	-97	1	-10	-1	multi-exon	FALSE	canonical	3	46	junction_7	7.12179752590594	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTGCTCCTACC	8775	False	NA	NA	False	NA	NA	NA	94967637	94935300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
tx.3451	chr11	-	3519	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	41	0	3	0	multi-exon	FALSE	canonical	3	566	junction_10	130.748239149965	1099	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	95201031	95165084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
tx.3452	chr11	-	3412	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	222.401444165419	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	95201031	95165084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
tx.3453	chr11	-	3430	14	FSM	ENSMUSG00000038909.17	ENSMUST00000107733.10	3470	14	40	0	2	0	multi-exon	FALSE	canonical	3	281	junction_9	177.090656421269	432	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	95201032	95165084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
tx.3454	chr11	+	2315	8	FSM	ENSMUSG00000038893.13	ENSMUST00000037502.7	2317	8	2	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	7.85324578679129	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTTTCTGAATACC	NA	False	NA	NA	False	NA	NA	NA	95227845	95272698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
tx.3455	chr11	+	1309	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	212	2	-2	-2	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCGAGACCCTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	95275729	95282600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
tx.3456	chr11	+	1284	9	FSM	ENSMUSG00000020873.16	ENSMUST00000131193.3	1299	9	13	2	-2	-2	multi-exon	FALSE	canonical	3	66	junction_2	72.2789734293453	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCGAGACCCTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	95275729	95282600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95275940_95276626_95276731_95277336_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
tx.3457	chr11	+	2778	4	NIC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	2064	-9	intron_retention	FALSE	canonical	3	284	junction_2	7.07106781186548	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAAGTGCGAGACCC	NA	False	NA	NA	False	NA	NA	NA	95277795	95282593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_95280033_95281103_95281211_95281350_95281505_95282313
tx.3458	chr11	+	2503	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	-5	383	-5	-383	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGTCTTTTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	95304900	95383849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
tx.3459	chr11	+	2497	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-5	-384	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.6534202795881	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTGGTCTTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	95304915	95383848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
tx.346	chr1	+	3546	25	FSM	ENSMUSG00000025964.16	ENSMUST00000114103.8	2655	25	-329	-562	-9	562	multi-exon	FALSE	canonical	2	7	junction_24	11.7541363877667	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTTGTCTGTATGGAA	NA	False	NA	NA	False	NA	NA	NA	63485040	63632633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63631766
tx.3460	chr11	+	2665	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	14	384	14	-384	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	306	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTGGTCTTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	95304937	95383848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
tx.3461	chr11	-	3411	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	35	0	35	0	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACGATGCCAAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	95478526	95459643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
tx.3462	chr11	+	1749	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	43	7	0	-7	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	2025	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCACTCGGGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	95557825	95571592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
tx.3463	chr11	+	3088	6	NIC	ENSMUSG00000075595.10	novel	6568	7	NA	NA	-136	4	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	14.0285423334001	69	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATTCTCAAAGATGCAT	NA	False	NA	NA	False	NA	NA	NA	95603700	95655541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_95604055_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
tx.3464	chr11	+	5348	6	NIC	ENSMUSG00000075595.10	novel	3982	6	NA	NA	-115	2825	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	20.899760764181	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCCAGGTACTGTCTT	NA	False	NA	NA	False	NA	NA	NA	95603721	95658362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_95604055_95639825_95640434_95643700_95643849_95644187_95644304_95644736_95644882_95654364
tx.3465	chr11	+	2042	3	FSM	ENSMUSG00000050860.7	ENSMUST00000150134.2	590	3	-14	-1438	-14	-1	multi-exon	FALSE	canonical	3	31	junction_2	1.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGGACTTGTTCTCTT	2183	False	NA	NA	False	NA	NA	NA	95715310	95722965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95715536_95719491_95719602_95721258
tx.3466	chr11	+	594	2	FSM	ENSMUSG00000086015.2	ENSMUST00000146868.2	1269	2	-9	684	-9	-684	multi-exon	TRUE	canonical	3	111	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATGTTTTTCTCAGTC	1017	False	NA	NA	False	NA	NA	NA	95749681	95751186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95749909_95750819
tx.3467	chr11	-	4083	11	FSM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	18	-2379	18	2379	multi-exon	FALSE	canonical	3	16	junction_4	6.67907179179862	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACTCGGGTGGTGTGCT	2908	False	NA	NA	False	NA	NA	NA	95805699	95754389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
tx.3468	chr11	-	7600	10	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	31790	0	-6315	0	3prime_fragment	FALSE	canonical	3	452	junction_5	68.2209554714099	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGTGTGTCTGTGCTTC	NA	False	NA	NA	False	NA	NA	NA	95864976	95847988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764
tx.3469	chr11	-	1982	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-3	307	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	NA	NA	NA	95873440	95853954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
tx.347	chr1	+	3075	26	FSM	ENSMUSG00000025964.16	ENSMUST00000087374.10	6426	26	-13	3364	-9	0	multi-exon	FALSE	canonical	2	14	junction_24	11.498591218058	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGAATCCTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	63485040	63632071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63624523_63624615_63631766
tx.3470	chr11	-	2480	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-5	5903	-5	370	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	645	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGTTCTTAATGTCCTG	NA	False	NA	NA	False	NA	NA	NA	95896771	95853891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
tx.3471	chr11	-	3998	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-3	2326	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	204.16338161025	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTGGTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	95873440	95851935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
tx.3472	chr11	-	2413	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-3	308	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_5	125.171983727207	136	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTGTTTCTTAACCC	NA	False	NA	NA	False	NA	NA	NA	95896769	95853953	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
tx.3473	chr11	-	2063	15	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-2	307	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	223.647955866503	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	NA	NA	NA	95873439	95853954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95871957_95873327
tx.3474	chr11	+	865	7	FSM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	-31	15	-17	-15	multi-exon	FALSE	canonical	3	60	junction_6	239.545866635645	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTCCAAGTTATTTTT	3246	False	NA	NA	False	NA	NA	NA	95925759	95938241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95938020
tx.3475	chr11	+	941	8	FSM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	48	15	-18	-15	multi-exon	FALSE	canonical	3	665	junction_5	23.859281341282	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTCCAAGTTATTTTT	3245	False	NA	NA	False	NA	NA	NA	95925758	95938241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
tx.3476	chr11	-	2910	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	27	1060	27	-1060	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	2164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAAGCGCCTGTGGGTGT	5494	False	NA	NA	False	NA	NA	NA	95956187	95939317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
tx.3477	chr11	-	604	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	-4	-4	-4	1	multi-exon	FALSE	canonical	3	5157	junction_4	2293.78611688187	1029	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	3526	False	NA	NA	False	NA	NA	NA	95966449	95963811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
tx.3478	chr11	-	580	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	1	4134	1	1	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	934	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	3480	False	NA	NA	False	NA	NA	NA	95966495	95963811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
tx.3479	chr11	-	1551	5	ISM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	4359	43	4357	-43	3prime_fragment	FALSE	canonical	3	408	junction_2	31.4722099637124	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGCTGTGTTGATT	8570	False	NA	NA	False	NA	NA	NA	95998431	95990194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256
tx.348	chr1	+	3068	26	FSM	ENSMUSG00000025964.16	ENSMUST00000114107.3	6110	26	-321	3363	-1	1	multi-exon	FALSE	canonical	2	8	junction_25	13.3899066464259	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAATCCTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	63485048	63632072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63620295_63620387_63631766
tx.3480	chr11	-	1574	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	3	44	1	-44	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	379	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGTGCTGTGTTGAT	4214	False	NA	NA	False	NA	NA	NA	96002787	95990195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
tx.3481	chr11	+	1998	2	FSM	ENSMUSG00000078706.5	ENSMUST00000150490.3	3257	2	-462	1721	77	1284	multi-exon	FALSE	canonical	3	27	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCTGTCCCAGGTGC	8352	False	NA	NA	False	NA	NA	NA	96142007	96153803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96142640_96152437
tx.3482	chr11	-	2560	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAAAGCCCTGGCTGC	NA	False	NA	NA	False	NA	NA	NA	96668366	96658380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
tx.3483	chr11	-	2180	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	19	-2	-9	2	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGTTGCAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	96668366	96658700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
tx.3484	chr11	+	1164	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	188	junction_5	206.095705923243	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	96679961	96698975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96698628
tx.3485	chr11	+	2375	5	FSM	ENSMUSG00000018666.14	ENSMUST00000134585.8	2377	5	2	0	2	0	multi-exon	FALSE	canonical	3	66	junction_4	281.892155797213	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	96679964	96698975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441
tx.3486	chr11	+	2199	5	ISM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-20	491	2	0	5prime_fragment	FALSE	canonical	3	583	junction_4	77.1508263079534	479	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	96679964	96698975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441
tx.3487	chr11	+	2200	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-18	-931	4	931	multi-exon	FALSE	canonical	3	29	junction_5	266.87570140423	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTCTGAGGTGCTA	NA	False	NA	NA	False	NA	NA	NA	96679966	96700397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
tx.3488	chr11	-	3532	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-26	-8	intron_retention	FALSE	canonical	3	133	junction_3	578.474430434627	128	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGCACTTTCTCCCCC	NA	False	NA	NA	False	NA	NA	NA	96714865	96708247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96714770
tx.3489	chr11	-	3500	4	FSM	ENSMUSG00000038615.18	ENSMUST00000169828.8	3530	4	14	16	14	1	multi-exon	FALSE	canonical	3	60	junction_3	612.843826399153	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCAGCTTAAGTGCACTT	NA	False	NA	NA	False	NA	NA	NA	96714939	96708255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714901
tx.349	chr1	+	2900	24	FSM	ENSMUSG00000025964.16	ENSMUST00000182642.8	2889	24	-7	-4	-7	4	multi-exon	FALSE	canonical	2	25	junction_12	8.88489723439638	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTCTTCTCTGCCCTTT	NA	False	NA	NA	False	NA	NA	NA	63485042	63612380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045
tx.3490	chr11	-	4636	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	5	13	5	4	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	1624	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTAAGTGCACTTTCT	NA	False	NA	NA	False	NA	NA	NA	96720789	96708252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
tx.3491	chr11	-	3534	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	-4	17	-4	0	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	720	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	NA	False	NA	NA	NA	96714843	96708256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
tx.3492	chr11	-	3944	4	NNC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	-27	0	intron_retention	FALSE	canonical	3	150	junction_3	570.471345078397	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	NA	False	NA	NA	NA	96714866	96708256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
tx.3493	chr11	+	925	9	FSM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	2	3	2	-3	multi-exon	FALSE	canonical	3	213	junction_8	11.8420595759353	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTCCTTTCTTGACT	777	False	NA	NA	False	NA	NA	NA	96740703	96752026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
tx.3494	chr11	-	1863	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	33	354	33	36	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	1053	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCTTGAAGTTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	96807289	96798605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
tx.3495	chr11	+	1364	2	FSM	ENSMUSG00000047040.10	ENSMUST00000062172.6	1242	2	-117	-5	-25	0	multi-exon	FALSE	canonical	3	7	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGGTCTTATTTATACAC	NA	False	NA	NA	False	NA	NA	NA	96820102	96826474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96820336_96825343
tx.3496	chr11	+	3587	3	FSM	ENSMUSG00000047040.10	ENSMUST00000107636.4	3545	3	-42	0	-20	0	multi-exon	FALSE	canonical	1	1	junction_2	1	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGGCTGACAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	96820107	96828656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96820336_96822336_96822380_96825340
tx.3497	chr11	-	3018	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	35	1	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	860	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGCGTTTGGCAGTT	NA	False	NA	NA	False	NA	NA	NA	96868502	96844165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
tx.3498	chr11	-	1401	3	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	41	-6517	combination_of_known_splicesites	FALSE	canonical	3	301	junction_2	103	42	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAACAGCAAGAATGAGA	NA	False	NA	NA	False	NA	NA	NA	96868496	96851561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_96852836_96854190_96854268_96868446
tx.3499	chr11	+	3631	2	FSM	ENSMUSG00000038560.8	ENSMUST00000107622.2	3621	2	-3	-7	-3	4	multi-exon	FALSE	canonical	3	16	junction_1	0	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCTTTGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	96909555	96915564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96909854_96912231
tx.35	chr1	-	3413	7	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	565	226	376	16	3prime_fragment	FALSE	canonical	3	939	junction_3	42.5976003497328	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGTTTTGTAGT	NA	False	NA	NA	False	NA	NA	NA	10107787	10095051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153
tx.350	chr1	+	2281	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	16	2189	-11	1	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	497	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGGATCAGCTGGCTGA	NA	False	NA	NA	False	NA	NA	NA	63769788	63791625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
tx.3500	chr11	+	1530	8	FSM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	16.9597362320652	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATCTCAAGTCTATT	NA	False	NA	NA	False	NA	NA	NA	96920763	96924784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
tx.3501	chr11	+	1685	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	20	3	-15	-3	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCCTATGTTTATATCT	893	False	NA	NA	False	NA	NA	NA	96932405	96940036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
tx.3502	chr11	+	3610	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	161	0	-31	0	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	96941614	96959730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
tx.3503	chr11	+	1616	6	ISM	ENSMUSG00000038534.20	ENSMUST00000168565.2	3535	24	14927	0	-1136	0	3prime_fragment	FALSE	canonical	3	70	junction_1	34.0141147172758	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	96956572	96959730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
tx.3504	chr11	+	1398	4	ISM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	282	-633	282	0	3prime_fragment	FALSE	canonical	3	130	junction_3	12.5521135891752	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	96957990	96959730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_96958176_96958259_96958387_96958490_96958614_96958767
tx.3505	chr11	-	2542	6	FSM	ENSMUSG00000001444.3	ENSMUST00000001484.3	2488	6	-52	-2	-52	2	multi-exon	FALSE	canonical	2	5	junction_1	1.26491106406735	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCTCCTTCTGTGGCTGG	NA	False	NA	NA	False	NA	NA	NA	97006209	96988894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_96990205_96990595_96990658_96990752_96990912_96992304_96992427_96992769_96992925_97005475
tx.3506	chr11	-	3357	10	NIC	ENSMUSG00000038517.16	novel	2391	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	13.1487219488773	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	6088	False	NA	NA	False	NA	NA	NA	97042317	97026998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
tx.3507	chr11	-	3359	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	14.4990421139544	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	6083	False	NA	NA	False	NA	NA	NA	97042322	97026998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
tx.3508	chr11	-	2035	9	NIC	ENSMUSG00000038517.16	novel	2173	11	NA	NA	40	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	13.3603892158874	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTGATTCCGACTCC	6124	False	NA	NA	False	NA	NA	NA	97042281	97029230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
tx.3509	chr11	-	3686	7	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	21751	1	-730	-1	3prime_fragment	FALSE	canonical	3	962	junction_5	83.2554636178445	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGCTGCTTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	97056956	97050540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872
tx.351	chr1	-	4444	4	FSM	ENSMUSG00000025959.14	ENSMUST00000114086.8	7662	4	-169	3387	-169	-3387	multi-exon	FALSE	canonical	3	7	junction_1	3.85861230093008	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGAGTAATCATTGC	NA	False	NA	NA	False	NA	NA	NA	64160819	64071992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058
tx.3510	chr11	-	3812	8	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	20205	1	-2276	-1	3prime_fragment	FALSE	canonical	3	962	junction_5	77.1325389924938	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGCTGCTTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	97058502	97050540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375
tx.3511	chr11	-	5306	19	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	6063	3	6063	-3	3prime_fragment	FALSE	canonical	3	859	junction_18	101.233259551919	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTGCTGCTTCGTTC	NA	False	NA	NA	False	NA	NA	NA	97072644	97050542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450
tx.3512	chr11	-	4135	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-59	1818	-59	978	multi-exon	TRUE	canonical	3	682	junction_21	133.681077140662	1513	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	97078766	97052357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
tx.3513	chr11	-	4159	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	58	-2	-10	0	multi-exon	FALSE	canonical	3	268	junction_18	36.1553409289133	595	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	97171406	97096667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
tx.3514	chr11	+	1479	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	140	812	-52	-812	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	2296	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTGTTCTGTACAT	NA	False	NA	NA	False	NA	NA	NA	97206681	97219934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
tx.3515	chr11	+	5881	10	FSM	ENSMUSG00000038485.7	ENSMUST00000238729.2	7131	10	-216	1466	-216	-1466	multi-exon	FALSE	canonical	3	14	junction_4	9.34258800425685	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	97253044	97287902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
tx.3516	chr11	+	5766	9	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-203	-1466	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.78564169540279	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	97253057	97287902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
tx.3517	chr11	+	5832	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11153	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	10.5499083933345	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	97295205	97393228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
tx.3518	chr11	+	5887	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11149	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.0805138246165	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	97295209	97393228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338936_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
tx.3519	chr11	+	5799	24	FSM	ENSMUSG00000049807.17	ENSMUST00000121799.8	5816	24	17	0	17	0	multi-exon	FALSE	canonical	3	16	junction_1	11.2785659172316	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	97306375	97393228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_97306494_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
tx.352	chr1	-	3781	4	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-30	-3400	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4.24264068711928	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAATGCAAAA	NA	False	NA	NA	False	NA	NA	NA	64161471	64072005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_64074924_64081472_64081597_64117865_64118494_64161360
tx.3520	chr11	+	1642	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-11	-1019	-11	1019	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGAGAATCAAAAATTCCA	NA	False	NA	NA	False	NA	NA	NA	97489325	97514738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
tx.3521	chr11	+	2488	3	ISM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-4	2235	-4	1627	5prime_fragment	FALSE	canonical	3	106	junction_2	5.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACTTATAGACAAAGCC	NA	False	NA	NA	False	NA	NA	NA	97489332	97511484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_97489494_97505749_97505855_97509262
tx.3522	chr11	-	2222	2	Genic_Genomic	ENSMUSG00000043439.6	novel	2314	1	NA	NA	-28	5	multi-exon	FALSE	canonical	3	78	junction_1	0	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGTCCTTGCCTCCG	4913	False	NA	NA	False	NA	NA	NA	97520556	97518209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr11_-_97518492_97518616
tx.3523	chr11	+	5581	4	ISM	ENSMUSG00000038437.12	ENSMUST00000107586.3	7206	20	13864	13	1384	-13	3prime_fragment	FALSE	canonical	3	13	junction_1	2.16024689946929	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATCCAAAGAGACCTTG	NA	False	NA	NA	False	NA	NA	NA	97568261	97576276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_97569490_97569790_97569882_97571295_97571653_97572371
tx.3524	chr11	+	741	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	940	junction_1	75.5	340	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2448	False	NA	NA	False	NA	NA	NA	97576774	97579447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_97577042_97577326_97577447_97579093
tx.3525	chr11	-	3222	9	ISM	ENSMUSG00000018537.17	ENSMUST00000103148.8	1438	11	4114	-26	-3118	-2	3prime_fragment	FALSE	canonical	3	189	junction_6	17.8321163914999	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAACCAGATTAATTTAA	NA	False	NA	NA	False	NA	NA	NA	97586353	97580619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241
tx.3526	chr11	-	1738	10	ISM	ENSMUSG00000018537.17	ENSMUST00000103148.8	1438	11	-40	-25	-33	-3	intron_retention	FALSE	canonical	3	57	junction_9	50.8265022732564	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCAACCAGATTAATTTA	NA	False	NA	NA	False	NA	NA	NA	97590507	97580620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590031
tx.3527	chr11	-	1396	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	-22	973	-22	-4	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACCAACCAGATTAATTT	NA	False	NA	NA	False	NA	NA	NA	97590496	97580621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
tx.3528	chr11	+	744	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	23	-1	-12	1	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	1102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	97594247	97604327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
tx.3529	chr11	-	5050	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	1	2	1	-2	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTATGTGAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	97635529	97605984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
tx.353	chr1	+	6798	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	-12	1578	-2	-1578	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	64571965	64642129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
tx.3530	chr11	-	3247	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	-13	-129	-13	-5	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGATTTCTTGGAGCAA	7422	False	NA	NA	False	NA	NA	NA	97657395	97636311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
tx.3531	chr11	-	564	4	ISM	ENSMUSG00000071415.7	ENSMUST00000151118.2	728	5	296	-19	296	19	3prime_fragment	FALSE	canonical	3	13439	junction_1	424.830423685603	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTCCAATATCAGCT	NA	False	NA	NA	False	NA	NA	NA	97672806	97668844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631
tx.3532	chr11	-	527	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	26	506	26	5	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	990	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCTTCTTGACACCTT	NA	False	NA	NA	False	NA	NA	NA	97673237	97668858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
tx.3533	chr11	+	3435	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	104	1	-3	-1	multi-exon	FALSE	canonical	3	479	junction_6	89.534754270184	1019	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGGCTTCTTCCTCTTT	4560	False	NA	NA	False	NA	NA	NA	97690494	97729589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
tx.3534	chr11	-	2893	14	FSM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	-12	0	-12	0	multi-exon	FALSE	canonical	3	23	junction_9	6.65462423196374	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCGCGCCTGCGTGTA	6848	False	NA	NA	False	NA	NA	NA	97877282	97814063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847393_97869328_97869508_97877063
tx.3535	chr11	-	3391	14	FSM	ENSMUSG00000020882.18	ENSMUST00000017552.13	3396	14	-1	6	-1	-6	multi-exon	FALSE	canonical	2	14	junction_1	30.0140006777902	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCCTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	97913461	97892339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
tx.3536	chr11	-	1733	12	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	22.8711807541917	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913468	97895750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
tx.3537	chr11	-	1884	13	FSM	ENSMUSG00000020882.18	ENSMUST00000092736.11	1880	13	-4	0	-4	0	multi-exon	FALSE	canonical	3	20	junction_6	26.3832596335041	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913464	97895750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
tx.3538	chr11	-	1752	13	FSM	ENSMUSG00000020882.18	ENSMUST00000107562.2	1745	13	-7	0	-7	0	multi-exon	FALSE	canonical	3	23	junction_7	26.3358384884341	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913467	97895750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
tx.3539	chr11	+	708	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	29	14	-4	-14	multi-exon	FALSE	canonical	3	9068	junction_1	2898.60244945732	1329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTGTTTAGCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	97917778	97921304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
tx.354	chr1	+	6832	9	FSM	ENSMUSG00000025958.15	ENSMUST00000190348.2	1260	9	-79	-5493	-4	-1578	multi-exon	FALSE	canonical	3	25	junction_4	27.9773904251272	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	64571973	64642129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
tx.3540	chr11	+	1508	5	ISM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	67	8	34	-8	3prime_fragment	FALSE	canonical	3	13947	junction_4	1138.33373291843	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGCAGTTTTGGCTGC	NA	False	NA	NA	False	NA	NA	NA	97917816	97921310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
tx.3541	chr11	-	2968	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	82	0	82	0	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTTGGTGTATC	5441	False	NA	NA	False	NA	NA	NA	97944206	97927448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
tx.3542	chr11	-	2500	15	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-57	2386	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	36.7548414137095	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTACCATCAGGGGAC	2317	False	NA	NA	False	NA	NA	NA	98041286	97979530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
tx.3543	chr11	-	2443	15	FSM	ENSMUSG00000020883.19	ENSMUST00000103143.10	8601	15	11	6147	5	2388	multi-exon	TRUE	canonical	3	137	junction_5	8.14567620374923	229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACCATCAGGGGACCC	3176	False	NA	NA	False	NA	NA	NA	98040427	97979528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
tx.3544	chr11	-	8008	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	8	8	8	-8	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTGCCTCTGT	NA	False	NA	NA	False	NA	NA	NA	98084111	98042988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
tx.3545	chr11	-	2812	18	NIC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	7	-2	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	56.1624559050546	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGCCTCTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	98084112	98042982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
tx.3546	chr11	-	2518	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	8	294	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCTGACCTTATTGCAG	NA	False	NA	NA	False	NA	NA	NA	98084111	98048284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
tx.3547	chr11	+	8195	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107538.2	5143	14	-560	-2492	-284	1972	multi-exon	FALSE	canonical	3	27	junction_13	22.2330315590945	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTTTTGCTGCATTGC	NA	False	NA	NA	False	NA	NA	NA	98093600	98144362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
tx.3548	chr11	+	8170	14	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-287	1974	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	25.4502647595533	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTGCATTGCAT	NA	False	NA	NA	False	NA	NA	NA	98093597	98144364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_98095237_98101189_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
tx.3549	chr11	+	8166	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107539.8	5912	14	-281	-1973	-281	1973	multi-exon	FALSE	canonical	3	54	junction_13	16.8635316059493	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTTTGCTGCATTGCA	NA	False	NA	NA	False	NA	NA	NA	98093603	98144363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
tx.355	chr1	+	6632	7	FSM	ENSMUSG00000025958.15	ENSMUST00000171164.8	1287	7	-59	-5286	-59	1600	multi-exon	FALSE	canonical	2	7	junction_1	32.4572368235841	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGTCTTAAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	64571896	64642016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_64572180_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
tx.3550	chr11	+	1687	7	FSM	ENSMUSG00000061718.13	ENSMUST00000078694.13	2001	7	314	0	314	0	multi-exon	FALSE	canonical	1	3	junction_1	2.21108319357027	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGAGACTCCTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	98239543	98248622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98240001_98241394_98241456_98241710_98241734_98242091_98242168_98246152_98246336_98247650_98247774_98247858
tx.3551	chr11	+	2068	15	FSM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	15	-13	15	0	multi-exon	TRUE	canonical	3	120	junction_11	11.573412528335	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGATGGTGCATTCCT	890	False	NA	NA	False	NA	NA	NA	98249208	98271938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
tx.3552	chr11	-	2410	8	FSM	ENSMUSG00000038208.14	ENSMUST00000090827.12	2419	8	9	0	9	0	multi-exon	FALSE	canonical	3	39	junction_7	8.7084289452161	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTCTGCTACTCTAT	NA	False	NA	NA	False	NA	NA	NA	98291307	98279502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
tx.3553	chr11	+	4573	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	-18	457	-18	182	multi-exon	TRUE	canonical	3	26	junction_8	10.5841234232719	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGTCTGAGAGTGGT	9019	False	NA	NA	False	NA	NA	NA	98303277	98328085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
tx.3554	chr11	-	734	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	1	12	1	-12	multi-exon	FALSE	canonical	3	749	junction_2	62.9567752950829	139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGTCAACTGGCGTG	NA	False	NA	NA	False	NA	NA	NA	98329816	98328545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
tx.3555	chr11	+	2198	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	198	1	-16	-1	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGAGTCCTGTCTGGC	NA	False	NA	NA	False	NA	NA	NA	98337857	98346198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
tx.3556	chr11	-	3291	4	ISM	ENSMUSG00000018168.9	ENSMUST00000103141.4	3658	8	56676	1	-104	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	0.942809041582063	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATAGCTTAGCCTGCCT	4854	False	NA	NA	False	NA	NA	NA	98379950	98355728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_98358513_98367752_98367870_98376399_98376517_98379677
tx.3557	chr11	-	2057	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	124	3	124	-3	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	301	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTGGCCTCTGCTTC	1447	False	NA	NA	False	NA	NA	NA	98478070	98472084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
tx.3558	chr11	+	2133	12	FSM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	14	1	3	-1	multi-exon	FALSE	canonical	3	1019	junction_3	95.9435956889203	1655	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTGTGCACGGTGTCA	NA	False	NA	NA	False	NA	NA	NA	98573393	98586804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
tx.3559	chr11	-	3381	26	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-1	-4	combination_of_known_junctions	TRUE	canonical	3	29	junction_25	34.6175446847404	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTGTGTGGGGAC	NA	False	NA	NA	False	NA	NA	NA	98620245	98595420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620206
tx.356	chr1	-	2667	3	FSM	ENSMUSG00000025956.11	ENSMUST00000053469.2	2666	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	51	junction_1	2	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTACCTGTCAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	64656328	64645638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_64647297_64654256_64654369_64655431
tx.3560	chr11	+	2501	10	FSM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	-51	2	-51	-2	multi-exon	FALSE	canonical	3	10	junction_1	13.6055544213057	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTGTGCCTCCTCCA	6239	False	NA	NA	False	NA	NA	NA	98632585	98659830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
tx.3561	chr11	+	1275	3	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	21678	2	9903	-2	3prime_fragment	FALSE	canonical	3	46	junction_2	2	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTGTGCCTCCTCCA	7551	False	NA	NA	False	NA	NA	NA	98654314	98659830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_98654614_98655103_98655232_98658982
tx.3562	chr11	-	2694	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	27	0	27	0	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTCTGTGATGTGTG	NA	False	NA	NA	False	NA	NA	NA	98666132	98658757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
tx.3563	chr11	+	4672	8	FSM	ENSMUSG00000052915.15	ENSMUST00000107487.10	2836	8	-411	-1425	-127	0	multi-exon	FALSE	canonical	2	4	junction_3	17.7924542593603	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTTGCCTCATTTTAT	203	False	NA	NA	False	NA	NA	NA	98686214	98698685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
tx.3564	chr11	+	2679	3	FSM	ENSMUSG00000052915.15	ENSMUST00000107485.8	2091	3	-594	6	-319	-6	multi-exon	FALSE	canonical	3	46	junction_1	7.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATAAGGACTATCTTG	11	False	NA	NA	False	NA	NA	NA	98686022	98691872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98687431_98689965_98690190_98690825
tx.3565	chr11	+	4556	9	FSM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	30	7	30	-7	multi-exon	FALSE	canonical	3	39	junction_3	7.97554857047464	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGAACTTTTGCCTC	360	False	NA	NA	False	NA	NA	NA	98686371	98698678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
tx.3566	chr11	+	3268	7	ISM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	4489	7	-160	-7	3prime_fragment	FALSE	canonical	3	39	junction_1	7.2953562094131	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGAACTTTTGCCTC	299	False	NA	NA	False	NA	NA	NA	98690830	98698678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
tx.3567	chr11	+	3736	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	5	0	5	0	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	678	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGGCCAGTTATTGT	287	False	NA	NA	False	NA	NA	NA	98700638	98724632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
tx.3568	chr11	+	2775	8	ISM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	13040	6	12687	-6	3prime_fragment	FALSE	canonical	3	273	junction_6	10.7018976001875	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGACTCTGTGGCCAGT	NA	False	NA	NA	False	NA	NA	NA	98713673	98724626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
tx.3569	chr11	+	5898	8	FSM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	1	1112	1	-1112	multi-exon	FALSE	canonical	2	8	junction_1	4.16986271980755	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAACAAAAAG	943	False	NA	NA	False	NA	NA	NA	98754464	98794754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
tx.357	chr1	-	2394	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	-366	2	-366	-2	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTCAGTGTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	64656767	64645633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
tx.3570	chr11	+	5191	4	ISM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	28506	1093	971	-1093	3prime_fragment	FALSE	canonical	2	8	junction_1	1.69967317119759	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAACCTCTGTGTATTCT	6950	False	NA	NA	False	NA	NA	NA	98782969	98794773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_98783546_98786942_98787153_98789556_98789659_98790470
tx.3571	chr11	+	2557	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	13	2044	13	-1	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	980	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	30	False	NA	NA	False	NA	NA	NA	98798639	98812718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
tx.3572	chr11	+	3176	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107474.8	2380	9	-19	-777	-19	-3	multi-exon	FALSE	canonical	3	15	junction_1	86.2060576467803	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTCTTGCCTCTCTG	8787	False	NA	NA	False	NA	NA	NA	98818624	98865765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
tx.3573	chr11	+	3277	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	-31	-777	-31	-3	multi-exon	FALSE	canonical	3	106	junction_2	61.7220331405245	232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTCTTGCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	98828492	98865765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
tx.3574	chr11	+	3210	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	25	3	25	-3	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTCTTGCCTCTCTG	7463	False	NA	NA	False	NA	NA	NA	98851262	98865765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
tx.3575	chr11	+	2559	8	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	4450	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	85.0267664938998	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTCTTGCCTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	98855687	98865766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_98855733_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
tx.3576	chr11	-	5216	36	FSM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	-1	6	-1	-6	multi-exon	FALSE	canonical	3	1094	junction_4	183.786113485769	1031	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	98915016	98883774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
tx.3577	chr11	+	2080	4	FSM	ENSMUSG00000017493.13	ENSMUST00000017637.13	3831	4	5	1746	5	726	multi-exon	FALSE	canonical	2	10	junction_3	1.69967317119759	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCAGATCATTGTGTTT	4234	False	NA	NA	False	NA	NA	NA	98932074	98943472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_98932672_98939051_98939198_98939919_98940055_98942270
tx.3578	chr11	-	2846	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	67	6	67	-6	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	370	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAAGGTCTCAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	99121776	99099878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
tx.3579	chr11	-	2772	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	39	-3	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	198.840962568234	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCAGTGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	99121804	99099875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119100_99119145_99119322_99119375_99121227
tx.358	chr1	-	707	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	9	-5	9	5	multi-exon	FALSE	canonical	3	111	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTACCTATGTGGTTT	7936	False	NA	NA	False	NA	NA	NA	64729809	64719024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_64719545_64729622
tx.3580	chr11	-	1349	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-10	-12	combination_of_known_splicesites	FALSE	canonical	3	18	junction_9	208.072874223562	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAATGGTGTTATGTGG	NA	False	NA	NA	False	NA	NA	NA	99121282	99100829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99121227
tx.3581	chr11	-	1415	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	161	0	161	0	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATACCTTGCTTATTTCAG	9760	False	NA	NA	False	NA	NA	NA	100036785	100031635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
tx.3582	chr11	-	1502	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	0	49	0	-49	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGGCCTTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	100151855	100147091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
tx.3583	chr11	-	1023	5	FSM	ENSMUSG00000053654.8	ENSMUST00000107406.2	1062	5	34	5	34	0	multi-exon	FALSE	canonical	3	72	junction_1	11.3688170009021	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	NA	False	NA	NA	NA	100156770	100153712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425
tx.3584	chr11	-	1715	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	-173	0	-173	0	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	NA	False	NA	NA	NA	100160870	100153712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
tx.3585	chr11	-	1322	9	NNC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-1880	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	29.6858552175948	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGAATTCATCATTTG	NA	False	NA	NA	False	NA	NA	NA	100162577	100153713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235_100160370_100162468
tx.3586	chr11	+	1216	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	102	4	102	-4	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	2961	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGATGTCCAGATT	4059	False	NA	NA	False	NA	NA	NA	100210812	100212918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
tx.3587	chr11	+	1181	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	9	-743	9	-4	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGATGTCCAGATT	4599	False	NA	NA	False	NA	NA	NA	100211352	100212918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100211656_100211773_100211876_100212142
tx.3588	chr11	-	3651	11	FSM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	0	-1531	0	-1	multi-exon	FALSE	canonical	3	486	junction_1	44.9070150421958	930	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTCTCAGTTGTGT	2048	False	NA	NA	False	NA	NA	NA	100246913	100238153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
tx.3589	chr11	-	3102	13	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_2	196.783863385413	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2049	False	NA	NA	False	NA	NA	NA	100246912	100238152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_100239306_100239477_100239686_100240062_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
tx.359	chr1	+	3351	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	-424	-4	99	0	multi-exon	FALSE	canonical	3	63	junction_5	18.3632752128592	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCGAGTGTGTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	64730079	64764803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
tx.3590	chr11	-	3236	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	-31	0	-17	0	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	932	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	NA	False	NA	NA	NA	100288606	100261444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
tx.3591	chr11	-	2063	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	104	11	104	-11	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAACACCTGAGGCCAGT	NA	False	NA	NA	False	NA	NA	NA	100305558	100299292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
tx.3592	chr11	-	2157	7	ISM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	105	13	105	-13	intron_retention	FALSE	canonical	3	85	junction_5	10.1159939369957	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATAACACCTGAGGCCA	NA	False	NA	NA	False	NA	NA	NA	100305557	100299294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752
tx.3593	chr11	+	2577	10	FSM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	15	-8	15	8	multi-exon	FALSE	canonical	3	18	junction_4	6.35959467611297	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGACAGATGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	100306537	100315658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
tx.3594	chr11	+	1547	5	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	6291	-8	-1050	8	3prime_fragment	FALSE	canonical	3	27	junction_1	4.63680924774785	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGACAGATGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	100312813	100315658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
tx.3595	chr11	-	1346	8	FSM	ENSMUSG00000017176.18	ENSMUST00000092689.9	1344	8	0	-2	0	-1	multi-exon	FALSE	canonical	3	21	junction_7	183.081112836772	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	NA	False	NA	NA	NA	100331846	100320179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331753
tx.3596	chr11	-	1458	8	FSM	ENSMUSG00000017176.18	ENSMUST00000107397.2	1348	8	-105	-5	-13	-1	multi-exon	FALSE	canonical	3	485	junction_1	42.2470866040561	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	NA	False	NA	NA	NA	100331859	100320179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
tx.3597	chr11	-	1382	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	16	1	0	-1	multi-exon	FALSE	canonical	3	274	junction_8	92.107868149252	293	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	NA	False	NA	NA	NA	100331899	100320179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
tx.3598	chr11	+	1289	4	NNC	ENSMUSG00000001558.6	novel	2017	5	NA	NA	-807	-36	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	6.59966329107444	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTCTTTTTTTAAATAA	NA	False	NA	NA	False	NA	NA	NA	100331935	100347812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_100332042_100337946_100338565_100347109_100347260_100347397
tx.3599	chr11	-	7924	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	-39	-5492	-39	5492	multi-exon	FALSE	canonical	3	21	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTACTGTGTGTT	7655	False	NA	NA	False	NA	NA	NA	100363606	100347947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100355272_100363006
tx.36	chr1	-	1261	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	5	18	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	318.204272730071	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGGTTTTGTAGTTG	NA	False	NA	NA	False	NA	NA	NA	10108388	10095049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10108143
tx.360	chr1	+	3242	9	NIC	ENSMUSG00000070871.11	novel	2923	10	NA	NA	103	0	intron_retention	FALSE	canonical	3	8	junction_3	34.7589916424513	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	64730083	64764799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_64730560_64740127_64740203_64741504_64741540_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
tx.3600	chr11	-	4292	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	131	3	0	0	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	3675	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	100418695	100367181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
tx.3601	chr11	-	4262	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	131	0	0	0	multi-exon	FALSE	canonical	3	2198	junction_15	363.337822300204	5421	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	100418695	100367181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
tx.3602	chr11	+	2192	10	NIC	ENSMUSG00000006784.15	novel	2240	12	NA	NA	251	-1	intron_retention	FALSE	canonical	3	16	junction_1	5.45690184791497	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTGAGTGACACTGTG	NA	False	NA	NA	False	NA	NA	NA	100440623	100462788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
tx.3603	chr11	+	1244	7	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	8065	1	4125	-1	3prime_fragment	FALSE	canonical	3	25	junction_1	3.53160335006952	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTGAGTGACACTGTG	2547	False	NA	NA	False	NA	NA	NA	100444497	100462788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
tx.3604	chr11	+	2293	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	64	0	64	0	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	NA	False	NA	NA	NA	100465793	100472554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
tx.3605	chr11	-	1787	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	543	0	2	0	multi-exon	FALSE	canonical	3	2240	junction_1	249.671049855795	2666	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5925	False	NA	NA	False	NA	NA	NA	100510451	100473643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
tx.3606	chr11	+	2077	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	20	0	20	0	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	399	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCCGTCCCCTACCCCT	NA	False	NA	NA	False	NA	NA	NA	100513721	100518433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
tx.3607	chr11	+	1985	5	NIC	ENSMUSG00000017837.13	novel	988	6	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	123.71413621733	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCCGTCCCCTACCCCT	NA	False	NA	NA	False	NA	NA	NA	100513721	100518433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_100513835_100515017_100515126_100515768_100515843_100515934_100516011_100516819
tx.3608	chr11	-	3237	18	FSM	ENSMUSG00000020918.15	ENSMUST00000153526.8	2946	18	-293	2	-1	-2	multi-exon	FALSE	canonical	3	22	junction_12	124.621058832359	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATTGTTTTTTGGGG	6778	False	NA	NA	False	NA	NA	NA	100603292	100595573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601075_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
tx.3609	chr11	-	3041	18	FSM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	-1	3	-1	-3	multi-exon	FALSE	canonical	3	387	junction_12	55.3609733498447	947	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGATTGTTTTTTGGG	6778	False	NA	NA	False	NA	NA	NA	100603292	100595574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
tx.361	chr1	-	2950	2	FSM	ENSMUSG00000045005.10	ENSMUST00000116133.4	2895	2	2	-57	2	57	multi-exon	FALSE	canonical	3	23	junction_1	0	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTATAA	NA	False	NA	NA	False	NA	NA	NA	64776906	64773570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_64776013_64776398
tx.3610	chr11	-	1742	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	36	137	-3	-135	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGATGCTGGTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	100629005	100605971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
tx.3611	chr11	-	1165	3	ISM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	20295	162	12295	-160	3prime_fragment	FALSE	canonical	3	116	junction_2	15.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGGCTCTACTCCCTG	4658	False	NA	NA	False	NA	NA	NA	100608746	100605996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_100606989_100607583_100607678_100608667
tx.3612	chr11	-	2467	9	FSM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	-1	-4	-1	4	multi-exon	FALSE	canonical	3	37	junction_7	5.82961190818051	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATGTATTTTATGTTA	NA	False	NA	NA	False	NA	NA	NA	100661784	100656853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100661704
tx.3613	chr11	-	4921	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	140	1	-46	-1	multi-exon	TRUE	canonical	3	41	junction_6	7.16386680880661	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGAGTCCTGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	100741410	100671557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
tx.3614	chr11	+	3876	19	ISM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	608	2	-81	-1	3prime_fragment	FALSE	canonical	3	9	junction_8	10.9994388184574	42	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTCTGCTTCCTGGTT	NA	False	NA	NA	False	NA	NA	NA	100751089	100775993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
tx.3615	chr11	-	4425	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	90	1	29	-1	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	1016	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCAGTGGGGGCTGGCTG	NA	False	NA	NA	False	NA	NA	NA	100830276	100777636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
tx.3616	chr11	-	4376	24	FSM	ENSMUSG00000004040.17	ENSMUST00000103114.8	6042	24	-46	1712	29	0	multi-exon	FALSE	canonical	3	67	junction_2	102.13864331127	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	NA	False	NA	NA	NA	100830276	100777635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100779587_100780303_100780367_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
tx.3617	chr11	-	3228	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	261	2	-75	-2	multi-exon	FALSE	canonical	2	4	junction_1	0	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTGAGGTTATATT	NA	False	NA	NA	False	NA	NA	NA	100861452	100847560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100850152_100860815
tx.3618	chr11	+	2355	17	ISM	ENSMUSG00000019302.17	ENSMUST00000168757.9	3967	22	-2	18886	-2	1	5prime_fragment	FALSE	canonical	3	143	junction_12	25.0571222409917	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGTCGTGATTTTTG	NA	False	NA	NA	False	NA	NA	NA	100900310	100935653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341
tx.3619	chr11	+	3986	21	FSM	ENSMUSG00000019302.17	ENSMUST00000103110.10	2716	21	20	-1290	-15	1	multi-exon	FALSE	canonical	3	25	junction_5	41.6171839508634	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGCCTGTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	100900297	100954540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
tx.362	chr1	-	3056	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	5	3854	3	57	multi-exon	FALSE	canonical	3	55	junction_1	0	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTATAA	NA	False	NA	NA	False	NA	NA	NA	64776905	64773570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_64776013_64776291
tx.3620	chr11	+	3974	21	NNC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.1429673371169	70	2	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	100900307	100954545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945837_100945970_100946259_100946432_100953137
tx.3621	chr11	+	3958	21	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	3	127	junction_18	25.9536124653197	224	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGCCTGTCTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	100900306	100954542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
tx.3622	chr11	+	2468	6	FSM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	72	20	72	-20	multi-exon	FALSE	canonical	3	15	junction_1	1.93907194296653	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCCTATTACATTAAA	NA	False	NA	NA	False	NA	NA	NA	100960909	100968478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066
tx.3623	chr11	+	2085	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	53	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	26.2908705931015	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3564	False	NA	NA	False	NA	NA	NA	100973443	100977445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
tx.3624	chr11	+	2377	9	FSM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	9	0	9	0	multi-exon	FALSE	canonical	3	125	junction_1	20.9388992069784	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3580	False	NA	NA	False	NA	NA	NA	100973459	100977445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
tx.3625	chr11	+	1810	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	15	1	2	-1	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	8238	False	NA	NA	False	NA	NA	NA	100978117	100983032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
tx.3626	chr11	+	1962	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	3	0	-1	0	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8249	False	NA	NA	False	NA	NA	NA	100978128	100983033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
tx.3627	chr11	-	1827	7	FSM	ENSMUSG00000019303.15	ENSMUST00000126386.8	1030	7	3	-800	3	491	multi-exon	FALSE	canonical	3	369	junction_2	24.7571538482651	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAACCCCACCGAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	100986223	100982157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983
tx.3628	chr11	-	946	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	25	320	-11	-11	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAAACCTCCCAGAT	NA	False	NA	NA	False	NA	NA	NA	100986237	100982968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
tx.3629	chr11	-	3111	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	52	2	2	-2	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGTTTCGTTGTGTA	9847	False	NA	NA	False	NA	NA	NA	101010667	100987340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
tx.363	chr1	-	8508	8	FSM	ENSMUSG00000051344.14	ENSMUST00000097713.2	8562	8	53	1	4	-1	multi-exon	FALSE	canonical	3	14	junction_5	6.03391773769796	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCTCATATCAGCTT	NA	False	NA	NA	False	NA	NA	NA	64995930	64828280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995853
tx.3630	chr11	+	1622	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	180	0	180	0	multi-exon	TRUE	canonical	3	373	junction_8	104.461715475096	562	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	1410	False	NA	NA	False	NA	NA	NA	101010943	101017245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
tx.3631	chr11	+	1753	11	FSM	ENSMUSG00000045007.10	ENSMUST00000043654.10	1754	11	1	0	1	0	multi-exon	TRUE	canonical	2	5	junction_5	90.3044295702044	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTTTGTTTGTGACT	1652	False	NA	NA	False	NA	NA	NA	101046733	101052613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101046995_101047273_101047387_101047578_101047747_101048277_101048347_101048608_101048689_101049834_101049962_101050882_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
tx.3632	chr11	-	3001	13	NIC	ENSMUSG00000035172.16	novel	2635	13	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	19.5867018379534	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	712	False	NA	NA	False	NA	NA	NA	101062156	101053504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
tx.3633	chr11	-	3048	13	FSM	ENSMUSG00000035172.16	ENSMUST00000164474.8	3010	13	-35	-3	-1	0	multi-exon	FALSE	canonical	3	27	junction_4	14.3843568581366	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	690	False	NA	NA	False	NA	NA	NA	101062178	101053504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
tx.3634	chr11	-	4140	20	ISM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	7729	-1	7705	0	3prime_fragment	FALSE	canonical	3	126	junction_14	14.0863974385853	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	NA	False	NA	NA	False	NA	NA	NA	101109547	101081940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479
tx.3635	chr11	-	4184	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	10	-1	2	0	multi-exon	FALSE	canonical	3	124	junction_20	14.6399282785128	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2628	False	NA	NA	False	NA	NA	NA	101117266	101081940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
tx.3636	chr11	-	3642	15	ISM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	10	6276	2	-3	5prime_fragment	FALSE	canonical	3	124	junction_14	16.7309135849706	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATTAGCTGCAGTT	2628	False	NA	NA	False	NA	NA	NA	101117266	101088217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
tx.3637	chr11	+	594	6	FSM	ENSMUSG00000078656.12	ENSMUST00000007533.15	615	6	22	-1	0	1	multi-exon	FALSE	canonical	3	39	junction_5	475.771541813926	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTGTGACTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	101144554	101148876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101148726
tx.3638	chr11	+	1082	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	22	2	0	2	multi-exon	FALSE	canonical	3	1136	junction_3	45.4682306671372	513	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCCTGTTACTACTGC	NA	False	NA	NA	False	NA	NA	NA	101144554	101150373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
tx.3639	chr11	-	720	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	166	0	-5	0	multi-exon	FALSE	canonical	3	1870	junction_1	0	447	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGCTAGTGTGTGGGGG	5668	False	NA	NA	False	NA	NA	NA	101169774	101168793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101169279_101169539
tx.364	chr1	-	8581	8	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	8.71311467541538	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTCTCATATCAGCT	NA	False	NA	NA	False	NA	NA	NA	64995924	64828281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995773
tx.3640	chr11	+	2339	7	FSM	ENSMUSG00000078653.5	ENSMUST00000103107.5	2335	7	9	-13	9	13	multi-exon	FALSE	canonical	2	14	junction_6	3.09120616516523	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTGGTTTAATATTA	NA	False	NA	NA	False	NA	NA	NA	101169930	101179540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101170307_101174217_101174294_101174546_101174719_101175585_101175749_101176490_101176636_101177679_101177777_101178230
tx.3641	chr11	-	1896	5	ISM	ENSMUSG00000035086.14	ENSMUST00000139997.9	3476	10	7430	0	614	0	3prime_fragment	FALSE	canonical	3	456	junction_3	41.6795813318704	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	NA	False	NA	NA	NA	101185648	101179087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826
tx.3642	chr11	-	2657	11	FSM	ENSMUSG00000035086.14	ENSMUST00000122817.8	2662	11	5	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	42.6812605249658	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	NA	False	NA	NA	NA	101193081	101179087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
tx.3643	chr11	-	1980	12	NNC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	132.301621336492	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	NA	False	NA	NA	NA	101193083	101179087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186405_101187083_101187143_101189834_101189903_101192553_101192683_101192957
tx.3644	chr11	-	2026	12	FSM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	28	2311	2	-1	multi-exon	FALSE	canonical	3	365	junction_8	49.9747043451001	410	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGGTACGCCTGTAT	NA	False	NA	NA	False	NA	NA	NA	101193084	101179088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
tx.3645	chr11	+	2645	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	17	2	17	-2	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	1760	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCCTGGTGCTGTACTC	NA	False	NA	NA	False	NA	NA	NA	101207055	101214361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
tx.3646	chr11	-	1315	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	201	0	-8	0	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	354	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	NA	False	NA	NA	NA	101308240	101297664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
tx.3647	chr11	+	3206	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	-3	20	-3	-20	multi-exon	FALSE	canonical	3	47	junction_3	4.27200187265877	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCTGCAAAGCCCATA	NA	False	NA	NA	False	NA	NA	NA	101315907	101326479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
tx.3648	chr11	+	3734	4	NIC	ENSMUSG00000035007.6	novel	3223	5	NA	NA	4	-20	intron_retention	FALSE	canonical	3	54	junction_2	2.35702260395516	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCTGCAAAGCCCATA	NA	False	NA	NA	False	NA	NA	NA	101315914	101326479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_101316437_101320277_101320437_101322173_101323025_101324277
tx.3649	chr11	+	527	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	87	0	-53	0	multi-exon	FALSE	canonical	3	8302	junction_4	1985.8892844265	701	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2328	False	NA	NA	False	NA	NA	NA	101333210	101336355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
tx.365	chr1	-	2200	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	96	6	96	-4	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	1091	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	NA	False	NA	NA	NA	65218244	65197780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
tx.3650	chr11	+	2996	2	FSM	ENSMUSG00000063316.14	ENSMUST00000152162.2	548	2	-2448	0	-12	0	multi-exon	FALSE	canonical	3	8302	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2369	False	NA	NA	False	NA	NA	NA	101333251	101336355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101336157_101336264
tx.3651	chr11	+	1359	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	4	-1	4	1	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCATTCTCCAGCAACT	985	False	NA	NA	False	NA	NA	NA	101339236	101349525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
tx.3652	chr11	-	2754	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	18	-6	18	6	multi-exon	TRUE	canonical	3	320	junction_5	13.7462722219517	650	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATGTTGTATCTGAGA	NA	False	NA	NA	False	NA	NA	NA	101357038	101349564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
tx.3653	chr11	+	1354	5	FSM	ENSMUSG00000001313.13	ENSMUST00000134980.2	831	5	219	-742	219	-6	multi-exon	FALSE	canonical	3	18	junction_1	62.3097103186975	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTATGGACTTAGT	8513	False	NA	NA	False	NA	NA	NA	101356528	101362673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
tx.3654	chr11	+	1397	5	FSM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	-4	1	-4	-1	multi-exon	FALSE	canonical	3	109	junction_1	23.8051990119806	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGGACTTAGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	101358996	101362678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883
tx.3655	chr11	-	5096	14	ISM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	25924	-5	-749	5	3prime_fragment	FALSE	canonical	3	266	junction_5	41.5443015837653	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAATGACTGATTGGG	8847	False	NA	NA	False	NA	NA	NA	101416781	101379584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150
tx.3656	chr11	-	6560	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	13	-1	13	1	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	338	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGACAAAGAATGACTGAT	NA	False	NA	NA	False	NA	NA	NA	101442692	101379588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
tx.3657	chr11	+	4336	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	-1	4	-1	-4	multi-exon	TRUE	canonical	3	94	junction_16	37.5030852725303	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAAGCTGTTTATTGT	977	False	NA	NA	False	NA	NA	NA	101443682	101472773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
tx.3658	chr11	+	4442	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	207	5	3	-5	multi-exon	FALSE	canonical	3	112	junction_17	38.3552196362625	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	981	False	NA	NA	False	NA	NA	NA	101443686	101472772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
tx.3659	chr11	+	2316	9	FSM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	-12	0	-12	0	multi-exon	FALSE	canonical	3	13	junction_1	4.99843725578305	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGGGGCATTCCTGGA	3676	False	NA	NA	False	NA	NA	NA	101473055	101482614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101473152_101473450_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
tx.366	chr1	+	9457	42	NIC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	-16	-1895	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	16.2957131693522	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTCAGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	65225825	65315959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
tx.3660	chr11	+	338	2	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	32	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	101511886	101512376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_101511968_101512119
tx.3661	chr11	+	1100	7	FSM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	11	13	11	-13	multi-exon	FALSE	canonical	3	866	junction_2	120.614284210269	501	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGTAAATAGTGTG	NA	False	NA	NA	False	NA	NA	NA	101518778	101526913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
tx.3662	chr11	+	1393	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	-13	2	-13	-2	multi-exon	FALSE	canonical	3	45	junction_1	0	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTTGATCTGGTAA	2537	False	NA	NA	False	NA	NA	NA	101556353	101558656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101556464_101557373
tx.3663	chr11	+	4261	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	64	0	-15	0	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	396	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTTTATTATGACTTT	NA	False	NA	NA	False	NA	NA	NA	101623839	101658184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
tx.3664	chr11	-	4184	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	25	3	4	-3	multi-exon	FALSE	canonical	3	8	junction_1	3.5	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTCTGTTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	101875600	101861971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101865766_101872442_101872670_101875437
tx.3665	chr11	-	4081	12	FSM	ENSMUSG00000017314.13	ENSMUST00000100398.5	3577	12	5	-509	5	0	multi-exon	TRUE	canonical	2	2	junction_2	3.33773813648833	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTCTGTTTGTCATTG	679	False	NA	NA	False	NA	NA	NA	101973305	101947840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101973154
tx.3666	chr11	-	4109	13	FSM	ENSMUSG00000017314.13	ENSMUST00000017458.11	4089	13	-22	2	-22	-2	multi-exon	FALSE	canonical	1	2	junction_2	3.83242742918897	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTCTGTTTGTCAT	7645	False	NA	NA	False	NA	NA	NA	101979363	101947842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101976125_101976189_101979245
tx.3667	chr11	+	2094	7	FSM	ENSMUSG00000048217.12	ENSMUST00000055409.6	2028	7	-67	1	-31	-1	multi-exon	FALSE	canonical	3	17	junction_2	3.13138237134266	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTGTCTCAAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	102036307	102040302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102036818_102037315_102037591_102037688_102037903_102038189_102038371_102038635_102038808_102038917_102039101_102039743
tx.3668	chr11	-	1559	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	14	1	14	-1	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTTTGCTTCTGTC	4479	False	NA	NA	False	NA	NA	NA	102047216	102043372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
tx.3669	chr11	-	1599	4	NIC	ENSMUSG00000020921.7	novel	1574	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	131.230924539742	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4504	False	NA	NA	False	NA	NA	NA	102047191	102043371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_102044421_102045382_102045530_102046549_102046731_102046969
tx.367	chr1	+	4813	7	ISM	ENSMUSG00000025949.17	ENSMUST00000188799.7	4083	11	-9	16696	1	22	5prime_fragment	FALSE	canonical	3	73	junction_1	15.5536705207056	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTCAGTGTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	65225842	65248580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747
tx.3670	chr11	-	2235	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	21	0	-14	0	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	1004	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6377	False	NA	NA	False	NA	NA	NA	102076101	102053322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
tx.3671	chr11	+	1435	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	138	0	-19	0	multi-exon	TRUE	canonical	3	149	junction_4	4.31740662898458	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	False	NA	NA	False	NA	NA	NA	102080632	102084907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
tx.3672	chr11	-	3857	26	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	1	0	intron_retention	TRUE	canonical	1	78	junction_13	41.1161087653002	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	NA	False	NA	NA	NA	102120967	102086572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
tx.3673	chr11	-	3777	27	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	78	junction_13	40.333300731889	321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	NA	False	NA	NA	NA	102120980	102086572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
tx.3674	chr11	-	3787	27	FSM	ENSMUSG00000008855.18	ENSMUST00000107152.9	3788	27	5	-4	5	0	multi-exon	FALSE	canonical	1	50	junction_25	47.7576630363989	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	NA	False	NA	NA	NA	102120987	102086572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
tx.3675	chr11	+	2566	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	-25	6	-25	-6	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	494	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGCCTCCGTCCCACA	NA	False	NA	NA	False	NA	NA	NA	102139682	102156007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
tx.3676	chr11	+	2028	3	ISM	ENSMUSG00000034768.5	ENSMUST00000036467.5	2843	5	7796	6	7796	-6	3prime_fragment	FALSE	canonical	3	26	junction_2	14	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTGTGGACATTGT	3511	False	NA	NA	False	NA	NA	NA	102167364	102170282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_102167698_102168003_102168118_102168701
tx.3677	chr11	+	4096	2	NIC	ENSMUSG00000034757.16	novel	2249	3	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	131	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCCTCTTTGTGACTG	NA	False	NA	NA	False	NA	NA	NA	102175762	102180062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_102178698_102178901
tx.3678	chr11	+	1930	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	9	0	1	0	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	NA	False	NA	NA	NA	102175765	102180063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
tx.3679	chr11	+	1878	3	FSM	ENSMUSG00000034757.16	ENSMUST00000100387.11	1876	3	-3	1	-3	-1	multi-exon	FALSE	canonical	3	43	junction_1	44	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCCTCTTTGTGACTG	NA	False	NA	NA	False	NA	NA	NA	102175761	102180062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102175915_102178133_102178698_102178901
tx.368	chr1	+	9497	42	FSM	ENSMUSG00000025949.17	ENSMUST00000097707.5	6641	42	-67	-2789	0	-1894	multi-exon	FALSE	canonical	3	51	junction_11	15.9367802178507	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTTCAGATCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	65225841	65315960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
tx.3680	chr11	+	2258	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	94	junction_1	18.5	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	NA	False	NA	NA	NA	102176012	102180063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102176545_102178133_102178698_102178901
tx.3681	chr11	-	4661	12	FSM	ENSMUSG00000059995.13	ENSMUST00000107134.8	3712	12	-949	0	368	0	multi-exon	FALSE	canonical	3	127	junction_7	17.6967102513153	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	NA	False	NA	NA	NA	102187087	102180125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774
tx.3682	chr11	-	4263	13	NNC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	344	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	44.7631886214058	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	NA	False	NA	NA	NA	102187111	102180125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102186307
tx.3683	chr11	-	3893	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	-205	0	-205	0	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	NA	False	NA	NA	NA	102187662	102180125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
tx.3684	chr11	-	3921	13	FSM	ENSMUSG00000059995.13	ENSMUST00000107132.3	3706	13	-214	-1	-212	0	multi-exon	FALSE	canonical	3	20	junction_7	41.9393576753653	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	NA	False	NA	NA	NA	102187669	102180125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
tx.3685	chr11	-	4025	13	NIC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	-280	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	44.3723982022859	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	NA	False	NA	NA	NA	102187737	102180125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183979_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
tx.3686	chr11	-	3152	19	FSM	ENSMUSG00000020923.18	ENSMUST00000107115.8	3199	19	-20	67	-19	2	multi-exon	FALSE	canonical	3	144	junction_13	159.309621666601	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9117	False	NA	NA	False	NA	NA	NA	102207550	102196816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
tx.3687	chr11	-	3267	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	-48	67	-23	2	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9113	False	NA	NA	False	NA	NA	NA	102207554	102196816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
tx.3688	chr11	-	3322	21	FSM	ENSMUSG00000020923.18	ENSMUST00000107123.10	2759	21	-256	-307	-20	2	multi-exon	FALSE	canonical	3	90	junction_20	173.298954122637	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	7950	False	NA	NA	False	NA	NA	NA	102208717	102196816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
tx.3689	chr11	-	3218	21	FSM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	43	1431	43	2	multi-exon	FALSE	canonical	3	130	junction_20	166.063624855054	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9050	False	NA	NA	False	NA	NA	NA	102209879	102196816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
tx.369	chr1	+	4742	7	FSM	ENSMUSG00000025949.17	ENSMUST00000185317.7	1044	7	-30	-3668	-30	-25	multi-exon	FALSE	canonical	3	56	junction_1	20.9257948209593	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAGAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	65225811	65248533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747
tx.3690	chr11	-	3112	20	FSM	ENSMUSG00000020923.18	ENSMUST00000178839.8	4580	20	38	1430	38	2	multi-exon	FALSE	canonical	3	130	junction_19	207.277671834178	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9045	False	NA	NA	False	NA	NA	NA	102209884	102196816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
tx.3691	chr11	-	3325	21	FSM	ENSMUSG00000020923.18	ENSMUST00000173870.8	2936	21	106	-495	106	2	multi-exon	FALSE	canonical	3	106	junction_20	170.388167136101	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	8467	False	NA	NA	False	NA	NA	NA	102210462	102196816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
tx.3692	chr11	+	2003	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	43	0	43	0	multi-exon	FALSE	canonical	3	171	junction_7	30.0134969638661	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTCATCTGTTGGAGA	7452	False	NA	NA	False	NA	NA	NA	102284271	102293381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
tx.3693	chr11	-	1490	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	37	158	-1	2	multi-exon	TRUE	canonical	3	4398	junction_3	174.765959202208	3484	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7725	False	NA	NA	False	NA	NA	NA	102298333	102293968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
tx.3694	chr11	+	2176	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	155	0	-41	0	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	838	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4293	False	NA	NA	False	NA	NA	NA	102321302	102327633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
tx.3695	chr11	+	2114	12	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	2641	0	178	0	3prime_fragment	FALSE	canonical	3	581	junction_5	45.6110034571005	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	6779	False	NA	NA	False	NA	NA	NA	102323788	102327633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
tx.3696	chr11	-	3086	8	NNC	ENSMUSG00000034685.5	novel	3118	8	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.90053612230382	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTCTTTCTCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	102338497	102327806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_102329736_102330257_102330364_102330485_102330603_102330699_102330880_102330961_102331121_102334475_102334569_102334789_102335018_102338223
tx.3697	chr11	-	2804	26	ISM	ENSMUSG00000034664.14	ENSMUST00000103086.4	3437	30	2657	14	-27	-7	3prime_fragment	FALSE	canonical	0	0	junction_4	1.63266653055668	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATCCGCCATGCTGCCT	7196	False	NA	NA	False	NA	NA	NA	102358052	102344136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_102344344_102346389_102346507_102346724_102346827_102347055_102347173_102347790_102347911_102348010_102348155_102348285_102348386_102348597_102348679_102348938_102349019_102349167_102349261_102350698_102350847_102350963_102351032_102351341_102351468_102351574_102351727_102351815_102351872_102351954_102352060_102352143_102352190_102352462_102352646_102355765_102355978_102356130_102356184_102356322_102356377_102356536_102356581_102356715_102356764_102357082_102357212_102357302_102357349_102357879
tx.3698	chr11	-	6834	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	38	-1	15	1	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGAGTCTGTTGTGAT	675	False	NA	NA	False	NA	NA	NA	102446987	102366739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
tx.3699	chr11	-	6859	8	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	10	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	57.8802423023573	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGTCTGTTGTGATTG	670	False	NA	NA	False	NA	NA	NA	102446992	102366737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102419011_102429107_102429183_102446905
tx.37	chr1	-	1295	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	176	227	-6	15	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTCTGTGGTTTTGTAG	NA	False	NA	NA	False	NA	NA	NA	10108176	10095052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
tx.370	chr1	+	5488	14	NIC	ENSMUSG00000015222.19	novel	4981	15	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	4.07909956417318	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAAGTTTCAGATTTT	NA	False	NA	NA	False	NA	NA	NA	66214454	66481740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_66214655_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
tx.3700	chr11	+	4646	8	FSM	ENSMUSG00000051455.14	ENSMUST00000100378.4	4573	8	-70	-3	-70	3	multi-exon	FALSE	canonical	3	15	junction_4	7.57277616039918	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGTTTCATTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	102556343	102573066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
tx.3701	chr11	+	4563	8	NIC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-47	3	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.6999904634709	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGTTTCATTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	102556366	102573066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_102556597_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
tx.3702	chr11	-	2318	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	48	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	765	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	102588560	102575511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
tx.3703	chr11	-	997	4	FSM	ENSMUSG00000020925.17	ENSMUST00000153157.8	989	4	-6	-2	-6	2	multi-exon	FALSE	canonical	0	0	junction_1	267.304237818175	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTTCTTGTTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	102588566	102579142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102579686_102581026_102581163_102582936_102583025_102588336
tx.3704	chr11	+	5284	26	NIC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	16	junction_1	5.06754378372797	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATGTCTCTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	102652258	102671086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
tx.3705	chr11	+	5107	26	FSM	ENSMUSG00000020926.17	ENSMUST00000068150.7	5102	26	-3	-2	-3	2	multi-exon	FALSE	canonical	2	11	junction_6	5.6661803712907	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTCTCTCCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	102652261	102671090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662740_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
tx.3706	chr11	+	3908	12	ISM	ENSMUSG00000020926.17	ENSMUST00000103081.10	4620	27	12608	-1	-34	1	intron_retention	FALSE	canonical	3	24	junction_1	2.36713028478028	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTCTCCTCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	102664872	102671089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
tx.3707	chr11	-	2269	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	305.092096751129	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	NA	False	NA	NA	NA	102710039	102690404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102709795
tx.3708	chr11	-	2009	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_2	340.826446548191	51	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAGGGTAATGTTATT	NA	False	NA	NA	False	NA	NA	NA	102710007	102690400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_102692022_102693666_102693743_102700471_102700572_102709795
tx.3709	chr11	-	1913	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	29	-1695	-2	98	multi-exon	FALSE	canonical	3	62	junction_2	360	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGAAAGGTTTAAGATC	NA	False	NA	NA	False	NA	NA	NA	102710007	102690306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102692022_102693666_102693743_102709885
tx.371	chr1	+	4327	10	NIC	ENSMUSG00000015222.19	novel	5440	14	NA	NA	-14	2944	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	3.69517536629242	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGTGTGGTAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	66214457	66467607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_66214655_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355
tx.3710	chr11	-	5216	2	FSM	ENSMUSG00000034520.15	ENSMUST00000155089.2	3413	2	-651	-1152	-651	0	multi-exon	FALSE	canonical	3	782	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	468	False	NA	NA	False	NA	NA	NA	102697265	102690404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102692022_102693666
tx.3711	chr11	-	2138	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	NA	False	NA	NA	NA	102710008	102690404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
tx.3712	chr11	-	1911	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	506	junction_2	138	517	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	NA	False	NA	NA	NA	102710013	102690404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102692022_102693666_102693743_102709795
tx.3713	chr11	-	2048	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	328.11515593699	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	NA	False	NA	NA	NA	102710008	102690404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709885
tx.3714	chr11	-	4940	3	FSM	ENSMUSG00000034520.15	ENSMUST00000107075.9	2314	3	-2519	-107	-1632	107	multi-exon	FALSE	canonical	3	164	junction_2	309	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTAAGATCTATCTATAG	NA	False	NA	NA	False	NA	NA	NA	102698246	102690297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102692022_102693666_102693743_102695106
tx.3715	chr11	-	3315	28	FSM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	7	2	4	-2	multi-exon	TRUE	canonical	3	142	junction_26	264.162864923118	2299	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTTGGTTTGCTGCTT	8473	False	NA	NA	False	NA	NA	NA	102771786	102729300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
tx.3716	chr11	-	3320	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	6	0	6	0	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	423	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGGAAAGTTAGTGCT	3730	False	NA	NA	False	NA	NA	NA	102815944	102796354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
tx.3717	chr11	-	1539	2	FSM	ENSMUSG00000045532.6	ENSMUST00000057849.6	1473	2	-57	-9	-57	9	multi-exon	FALSE	canonical	3	27	junction_1	0	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGTGCCCTGGGGAAG	8602	False	NA	NA	False	NA	NA	NA	102837571	102830080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102830739_102836690
tx.3718	chr11	-	1731	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	13	0	13	0	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	1005	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	8206	False	NA	NA	False	NA	NA	NA	102907981	102884872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
tx.3719	chr11	+	4661	12	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	292.275851814205	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTCTCTCCTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	102919376	102959736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949147_102950903_102951075_102954633_102954802_102955555_102955694_102956573
tx.372	chr1	+	5544	15	FSM	ENSMUSG00000015222.19	ENSMUST00000114017.8	4981	15	-11	-552	-11	-1	multi-exon	FALSE	canonical	2	3	junction_1	6.25846365707581	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTACAAGTTTCAGATTT	NA	False	NA	NA	False	NA	NA	NA	66214460	66481739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_66214655_66232277_66232341_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
tx.3720	chr11	+	4655	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	203	3	-36	-3	multi-exon	TRUE	canonical	3	928	junction_6	43.300411312535	389	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTCTCTCCTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	102919374	102959735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
tx.3721	chr11	-	3019	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	9	-5	9	5	multi-exon	FALSE	canonical	2	10	junction_14	6.65168384389875	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCTTTCCACTTTATT	9418	False	NA	NA	False	NA	NA	NA	102992475	102961124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
tx.3722	chr11	+	2205	11	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	19	junction_2	40.6811995889993	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	NA	False	NA	NA	NA	102992520	103003026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_102992615_102993507_102993923_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
tx.3723	chr11	+	2251	11	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	42	junction_2	36.0373417443629	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	NA	False	NA	NA	NA	102992523	103003026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_102992615_102993507_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
tx.3724	chr11	+	2055	10	FSM	ENSMUSG00000056938.17	ENSMUST00000092559.13	2083	10	28	0	1	0	multi-exon	FALSE	canonical	3	48	junction_2	33.6455746177417	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	NA	False	NA	NA	NA	102992535	103003026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
tx.3725	chr11	+	1636	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	44	junction_1	32.3138902022025	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	NA	False	NA	NA	NA	102993896	103003026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
tx.3726	chr11	+	1754	10	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	42	junction_1	35.1346615814703	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	NA	False	NA	NA	NA	102993912	103003025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
tx.3727	chr11	+	1929	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	0	-708	0	23	multi-exon	FALSE	canonical	3	13	junction_1	7	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTTAGTGGTGGCAG	NA	False	NA	NA	False	NA	NA	NA	103024139	103030725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_103024249_103024860_103024968_103029012
tx.3728	chr11	+	1966	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	-32	-24	-1	24	multi-exon	FALSE	canonical	3	4	junction_1	11.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTAGTGGTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	103024138	103030726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_103024284_103024860_103024968_103029012
tx.3729	chr11	+	2533	2	FSM	ENSMUSG00000043372.13	ENSMUST00000130341.2	370	2	-542	-1621	9	24	multi-exon	FALSE	canonical	3	27	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTAGTGGTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	103024148	103030726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_103024968_103029012
tx.373	chr1	+	2391	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	6	295	6	-295	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	681	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGTTTGTAAGTATTG	NA	False	NA	NA	False	NA	NA	NA	66739995	66758669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
tx.3730	chr11	+	3999	27	FSM	ENSMUSG00000055805.16	ENSMUST00000218163.2	3824	27	-177	2	-177	-2	multi-exon	FALSE	canonical	3	15	junction_15	7.11320132824136	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCGTCGGCTCGGTGC	4871	False	NA	NA	False	NA	NA	NA	103061755	103089725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
tx.3731	chr11	+	3973	27	NIC	ENSMUSG00000055805.16	novel	3824	27	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	8.099236577363	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACGTGCGTCGGCTCG	4890	False	NA	NA	False	NA	NA	NA	103061774	103089721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
tx.3732	chr11	-	2751	8	ISM	ENSMUSG00000020941.8	ENSMUST00000021324.3	4246	16	36819	0	-8806	0	3prime_fragment	FALSE	canonical	1	3	junction_4	2.18529407725405	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTTGTAGGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	103121479	103110587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157
tx.3733	chr11	-	4180	16	FSM	ENSMUSG00000020941.8	ENSMUST00000021324.3	4246	16	65	1	65	-1	multi-exon	FALSE	canonical	1	2	junction_13	1.87853370714738	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGTTTGTAGGCTGTG	NA	False	NA	NA	False	NA	NA	NA	103158233	103110588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157_103121263_103121857_103121990_103122182_103122313_103128323_103128462_103129757_103130379_103130457_103130669_103131862_103131933_103132940_103133216_103158163
tx.3734	chr11	-	4333	18	FSM	ENSMUSG00000034255.19	ENSMUST00000107024.9	4261	18	-71	-1	-14	1	multi-exon	FALSE	canonical	2	3	junction_6	4.84999910819383	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCGAATGTACTCTGGT	8103	False	NA	NA	False	NA	NA	NA	103254304	103222321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103251072_103251745_103253032_103253161_103254094
tx.3735	chr11	-	4540	5	ISM	ENSMUSG00000034247.10	ENSMUST00000184350.2	2260	8	19424	-2342	19424	0	3prime_fragment	TRUE	canonical	3	69	junction_4	8.77496438739212	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTGTGTTTAGTGTCTAT	1239	False	NA	NA	False	NA	NA	NA	103266170	103255100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765
tx.3736	chr11	-	5223	9	ISM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	17686	3	-233	-3	3prime_fragment	FALSE	canonical	3	46	junction_6	15.8424863894529	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCGTTGTGTTTAGTGTC	NA	False	NA	NA	False	NA	NA	NA	103285827	103255103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513
tx.3737	chr11	-	5071	11	ISM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	8765	814	8765	-814	3prime_fragment	FALSE	canonical	3	46	junction_6	15.7419820861288	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCTGAATCTCAA	NA	False	NA	NA	False	NA	NA	NA	103294748	103255914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650
tx.3738	chr11	-	5167	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-13	814	-13	-814	multi-exon	FALSE	canonical	3	46	junction_6	16.0020659823186	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCTGAATCTCAA	NA	False	NA	NA	False	NA	NA	NA	103303526	103255914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
tx.3739	chr11	-	3148	7	ISM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-3	11860	-3	-9518	5prime_fragment	FALSE	canonical	3	46	junction_1	16.3647656737136	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGTATTGGACAACAT	NA	False	NA	NA	False	NA	NA	NA	103303516	103266960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
tx.374	chr1	-	1946	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-67	37	-67	-37	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGTAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	66902503	66870034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
tx.3740	chr11	-	2933	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-15	-1874	-11	-3	multi-exon	TRUE	canonical	3	79	junction_1	134.545531326759	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTTGGCATTCTTTG	NA	False	NA	NA	False	NA	NA	NA	103588535	103567677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
tx.3741	chr11	-	3074	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	189	3	-11	-3	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	341	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTTGGCATTCTTTG	NA	False	NA	NA	False	NA	NA	NA	103588535	103567677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
tx.3742	chr11	-	3009	5	FSM	ENSMUSG00000020946.14	ENSMUST00000145265.2	917	5	-11	-2081	-11	-3	multi-exon	FALSE	canonical	3	13	junction_4	142.958910180513	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTTGGCATTCTTTG	NA	False	NA	NA	False	NA	NA	NA	103588535	103567677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103588455
tx.3743	chr11	-	3742	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	24	0	-8	0	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	693	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	NA	NA	NA	103844858	103712607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
tx.3744	chr11	-	4625	9	FSM	ENSMUSG00000034187.19_ENSMUSG00000092540.2	ENSMUST00000145126.8	3212	9	-40	-1373	-8	770	multi-exon	FALSE	canonical	3	278	junction_2	26.9973957077345	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTCTAGATAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	103844890	103769970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
tx.3745	chr11	+	2245	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	-5	2	-5	-2	multi-exon	FALSE	canonical	3	72	junction_4	7.43303437365925	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGTCATGTTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	103857559	103876161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
tx.3746	chr11	+	3206	10	FSM	ENSMUSG00000018411.18	ENSMUST00000106992.10	5253	10	88	1959	-1	1696	multi-exon	FALSE	canonical	3	21	junction_2	196.187551989303	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104122303	104220957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
tx.3747	chr11	+	1491	9	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	28	14	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	219.953652788491	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	NA	False	NA	NA	False	NA	NA	NA	104122243	104219275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.3748	chr11	+	2876	7	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4921	1684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.844793664459	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAGGACGCAT	NA	False	NA	NA	False	NA	NA	NA	104178127	104220945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_104178212_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.3749	chr11	+	2907	8	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4907	1635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.853421642833	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	104178113	104220896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.375	chr1	-	1404	10	NIC	ENSMUSG00000026000.17	novel	1385	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	146.548774167089	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	NA	False	NA	NA	NA	67078042	67042533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
tx.3750	chr11	+	2702	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8368	1663	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	130	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	9488	False	NA	NA	False	NA	NA	NA	104200490	104220924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.3751	chr11	+	2765	6	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-8368	1633	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	204.272954646473	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAGAAAAGAAAGAAAA	9488	False	NA	NA	False	NA	NA	NA	104200490	104220894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_104200605_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
tx.3752	chr11	+	2664	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8369	1678	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	201.516128386787	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGGAAAAAAAAAAGG	9487	False	NA	NA	False	NA	NA	NA	104200489	104220939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_104200551_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.3753	chr11	+	2770	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8178	1678	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	186.526640188473	33	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGGAAAAAAAAAAGG	9678	False	NA	NA	False	NA	NA	NA	104200680	104220939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_104200848_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.3754	chr11	+	2611	4	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-7766	1684	combination_of_known_splicesites	FALSE	canonical	3	463	junction_1	33.0386978489703	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAGGACGCAT	NA	False	NA	NA	False	NA	NA	NA	104201092	104220945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_104201361_104212176_104212259_104213253_104213367_104218797
tx.3755	chr11	-	4443	13	ISM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	17226	272	16637	0	3prime_fragment	FALSE	canonical	3	79	junction_6	46.6990958751404	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	104315891	104224326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747
tx.3756	chr11	-	5228	13	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-89	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_10	65.4221335295292	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8080	False	NA	NA	False	NA	NA	NA	104333206	104224326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
tx.3757	chr11	-	5326	14	FSM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	-88	272	-88	0	multi-exon	FALSE	canonical	3	79	junction_6	53.9110597824222	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8081	False	NA	NA	False	NA	NA	NA	104333205	104224326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
tx.3758	chr11	-	5333	14	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	61	junction_11	60.3367277042696	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8163	False	NA	NA	False	NA	NA	NA	104333123	104224327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
tx.3759	chr11	-	5385	15	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-103	-1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_14	72.5383783009423	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8066	False	NA	NA	False	NA	NA	NA	104333220	104224327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104332550
tx.376	chr1	-	228	2	ISM	ENSMUSG00000026000.17	ENSMUST00000119559.8	1385	10	34451	0	16682	0	3prime_fragment	FALSE	canonical	3	697	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	NA	False	NA	NA	NA	67043542	67042533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_67042717_67043497
tx.3760	chr11	-	5515	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106972.8	5427	15	-89	1	-89	-1	multi-exon	FALSE	canonical	3	85	junction_14	49.1984735120752	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8080	False	NA	NA	False	NA	NA	NA	104333206	104224327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
tx.3761	chr11	-	5593	16	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-123	-2	combination_of_known_splicesites	FALSE	canonical	3	22	junction_15	68.0631732698054	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTGTCAGGCTTTTCT	8046	False	NA	NA	False	NA	NA	NA	104333240	104224328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104332550
tx.3762	chr11	-	5776	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-137	-214	0	214	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCAATGGTAATT	2066	False	NA	NA	False	NA	NA	NA	104441446	104393356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
tx.3763	chr11	-	5661	19	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	214	combination_of_known_junctions	FALSE	canonical	3	52	junction_18	50.2831488843767	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCAATGGTAATT	2066	False	NA	NA	False	NA	NA	NA	104441446	104393356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
tx.3764	chr11	-	5584	19	FSM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	-228	-2196	0	4	multi-exon	FALSE	canonical	3	32	junction_11	53.6541278197565	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATCAAGGTGTTAAAGCT	2066	False	NA	NA	False	NA	NA	NA	104441446	104393566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
tx.3765	chr11	+	558	4	ISM	ENSMUSG00000061086.13	ENSMUST00000123074.8	677	6	3984	-6	-655	0	3prime_fragment	FALSE	canonical	3	41	junction_3	1.69967317119759	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCGTTGATTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	104475134	104478041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_104475439_104475762_104475841_104476552_104476598_104477910
tx.3766	chr11	+	5767	15	FSM	ENSMUSG00000020689.5	ENSMUST00000021028.5	5784	15	10	7	10	-7	multi-exon	TRUE	canonical	2	6	junction_5	3.08716896928204	5	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTGGCCTGAGACT	NA	False	NA	NA	False	NA	NA	NA	104498835	104561295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_104498991_104514236_104514323_104522999_104523196_104524223_104524477_104527877_104528041_104528648_104528811_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556459_104557905
tx.3767	chr11	+	2565	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	54	-752	0	752	multi-exon	TRUE	canonical	3	226	junction_6	21.0698243941424	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGGTGGTGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	105017304	105031972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
tx.3768	chr11	+	2436	9	NNC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	13	751	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	81.7370020247868	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	105017317	105031971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_105017433_105017601_105017694_105019681_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
tx.3769	chr11	+	3441	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	68	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	89.777533604829	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	105072420	105173002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
tx.377	chr1	-	1418	10	FSM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	-6	2858	1	0	multi-exon	FALSE	canonical	3	56	junction_9	152.892845556037	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	NA	False	NA	NA	NA	67078030	67042533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077934
tx.3770	chr11	+	3625	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	73	1	73	0	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	340	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	105072425	105173002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
tx.3771	chr11	+	3529	21	FSM	ENSMUSG00000020694.18	ENSMUST00000015107.13	3212	21	-317	0	73	0	multi-exon	FALSE	canonical	3	73	junction_5	74.0480249567806	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	105072425	105173002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
tx.3772	chr11	+	3349	20	FSM	ENSMUSG00000020694.18	ENSMUST00000092537.10	2743	20	-192	-414	74	0	multi-exon	FALSE	canonical	3	204	junction_5	62.1637993541137	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGGCAAAGATTTATTA	NA	False	NA	NA	False	NA	NA	NA	105072426	105167699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
tx.3773	chr4	+	200	1	FSM	ENSMUSG00000094417.2	ENSMUST00000117481.2	565	1	-125	490	-125	-490	mono-exon	FALSE	NA	NA	NA	NA	NA	30	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGGGACCACTCAACAG	NA	False	NA	NA	False	NA	NA	NA	145501163	145501363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr4_+_145501200_145501400
tx.3774	chr11	-	3301	6	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-3163	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_5	44.777673007873	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	105831787	105824527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925
tx.3775	chr11	-	2563	6	FSM	ENSMUSG00000019590.17	ENSMUST00000184086.8	1130	6	-53	-1380	-53	-2	multi-exon	FALSE	canonical	3	6	junction_2	71.4898594207598	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTTGCCTTCTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	105835018	105824529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_105826394_105826577_105826780_105827007_105827112_105827380_105827480_105828454_105828667_105834936
tx.3776	chr11	-	2771	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-25	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	105834990	105824528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
tx.3777	chr11	-	2532	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	209	0	-64	0	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	105835029	105824527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
tx.3778	chr11	-	2440	5	ISM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	6570	1	-44	-1	3prime_fragment	FALSE	canonical	3	172	junction_2	7.29297607290741	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	105828668	105824528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454
tx.378	chr1	-	1591	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	12	2858	5	0	multi-exon	FALSE	canonical	3	327	junction_5	113.959902487673	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	NA	False	NA	NA	NA	67078019	67042533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
tx.3780	chr11	+	1933	4	ISM	ENSMUSG00000020681.15	ENSMUST00000001964.8	2418	14	10310	-686	8913	-25	intron_retention	FALSE	canonical	1	2	junction_1	1.69967317119759	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATATAAGCACTGTTGA	NA	False	NA	NA	False	NA	NA	NA	105876343	105880765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_105876544_105876815_105876915_105878841_105878965_105879254
tx.3781	chr11	+	3028	6	NIC	ENSMUSG00000001901.16	novel	3368	13	NA	NA	6372	1045	intron_retention	FALSE	canonical	1	2	junction_1	1.72046505340853	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCTAGGTATCCAGTTAA	8992	False	NA	NA	False	NA	NA	NA	105910970	105926420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_105911570_105914550_105914745_105916619_105916705_105917541_105917699_105918382_105918564_105924608
tx.3782	chr11	+	5398	4	NIC	ENSMUSG00000001901.16	novel	3368	13	NA	NA	8853	1040	intron_retention	FALSE	canonical	1	4	junction_2	1.24721912892465	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACACCTAGGTATCCA	NA	False	NA	NA	False	NA	NA	NA	105913451	105926415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_105916705_105917541_105917699_105918382_105918564_105924608
tx.3783	chr11	+	5721	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	26	3	-2	-3	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	335	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTCTTGTGATGAAT	4771	False	NA	NA	False	NA	NA	NA	105927723	105950147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
tx.3784	chr11	+	2566	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	9	-1192	9	1192	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAATGAA	883	False	NA	NA	False	NA	NA	NA	105956895	105965630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
tx.3785	chr11	+	3802	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-37	-315	-37	315	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTGTGTTGCACGGTG	155	False	NA	NA	False	NA	NA	NA	105975401	106046587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
tx.3786	chr11	-	1217	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	-42	1775	-42	283	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGCCTGATGGGGA	NA	False	NA	NA	False	NA	NA	NA	106051010	106048856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
tx.3787	chr11	-	1147	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	-10	273	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	113.415993140297	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	106050978	106048866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050241_106050876
tx.3788	chr11	-	2057	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	-16	-524	-6	6	multi-exon	FALSE	canonical	3	87	junction_9	16.6340013225922	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCACCAGTGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	106084404	106054149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
tx.3789	chr11	-	2080	11	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	-5	6	combination_of_known_splicesites	TRUE	canonical	3	51	junction_9	25.5305699113827	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCACCAGTGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	106084403	106054149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
tx.379	chr1	-	2657	11	FSM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	174	2828	174	-2828	multi-exon	FALSE	canonical	3	27	junction_8	5.88642506110457	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	71142131	71069484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
tx.3790	chr11	-	2304	9	ISM	ENSMUSG00000069631.15	ENSMUST00000007444.14	2099	13	19337	-25	19337	4	3prime_fragment	FALSE	canonical	3	107	junction_6	12.8980376414399	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCACCAGTGTTTC	913	False	NA	NA	False	NA	NA	NA	106065025	106054151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504
tx.3791	chr11	-	2095	12	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	47.5345894069008	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGAATGGCACCAGTG	NA	False	NA	NA	False	NA	NA	NA	106084366	106054155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
tx.3792	chr11	-	4076	2	FSM	ENSMUSG00000069631.15	ENSMUST00000106867.2	3386	2	28	-718	-5	718	multi-exon	FALSE	canonical	3	125	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	106084370	106074009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106078007_106084291
tx.3793	chr11	-	3238	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	9	1946	9	1425	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	923	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	NA	False	NA	NA	NA	106107161	106090179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
tx.3794	chr11	-	3159	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-474	1425	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	175.732336713158	47	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	NA	False	NA	NA	NA	106107644	106090179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
tx.3795	chr11	+	3886	18	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-479	0	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_1	112.518818110864	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	106107272	106139965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
tx.3796	chr11	+	3989	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	22	0	22	0	multi-exon	FALSE	canonical	2	294	junction_3	62.7187383355908	534	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	106107773	106139965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
tx.3797	chr11	-	2905	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	240	-1	-35	1	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	1134	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTCTGATAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	106146665	106139966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
tx.3798	chr11	+	1318	11	FSM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	0	-2	0	2	multi-exon	FALSE	canonical	3	2261	junction_6	178.766439803449	1380	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAACTCCAGTTTGTTAA	4536	False	NA	NA	False	NA	NA	NA	106146979	106153948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
tx.3799	chr11	-	2748	13	FSM	ENSMUSG00000078619.11	ENSMUST00000021052.16	2747	13	-3	2	-3	-2	multi-exon	FALSE	canonical	3	510	junction_5	34.2842488939487	781	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCAGACCTGGTCATT	NA	False	NA	NA	False	NA	NA	NA	106163801	106154006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
tx.380	chr1	+	2589	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	29	227	0	-227	multi-exon	TRUE	canonical	3	576	junction_4	38.3577313661217	1030	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	NA	False	NA	NA	NA	71596337	71618563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
tx.3800	chr11	+	2907	8	NIC	ENSMUSG00000020712.12	novel	3059	8	NA	NA	-7	6	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2.1189138534559	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTCTTTTCCCGTTAT	7184	False	NA	NA	False	NA	NA	NA	106167490	106178965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_106167620_106172728_106172805_106173612_106173880_106174868_106175190_106175381_106175661_106176197_106176468_106177201_106177445_106177643
tx.3801	chr11	-	1255	6	FSM	ENSMUSG00000040592.12	ENSMUST00000167143.2	1195	6	-57	-3	-57	0	multi-exon	FALSE	canonical	3	38	junction_4	7.4027022093287	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCGTGATATCATCTC	5032	False	NA	NA	False	NA	NA	NA	106205412	106202166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106202732_106202832_106202875_106203147_106203267_106203458_106203768_106204486_106204538_106205243
tx.3802	chr11	-	1084	5	ISM	ENSMUSG00000040592.12	ENSMUST00000167143.2	1195	6	818	-1	818	1	3prime_fragment	FALSE	canonical	3	38	junction_4	7.56637297521078	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTTCGTGATATCATC	5907	False	NA	NA	False	NA	NA	NA	106204537	106202168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_106202732_106202832_106202875_106203147_106203267_106203458_106203768_106204486
tx.3803	chr11	-	7001	22	FSM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	-55	0	1	0	multi-exon	FALSE	canonical	2	5	junction_11	5.67646212197547	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCTTGTTTCTTAAA	9434	False	NA	NA	False	NA	NA	NA	106378677	106285475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
tx.3804	chr11	+	105	2	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	320	junction_1	0	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCTGGTGTCTTGTGTGT	4511	False	NA	NA	False	NA	NA	NA	106391740	106392037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_106391767_106391958
tx.3805	chr11	-	4518	11	ISM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	44457	189	-1363	57	3prime_fragment	FALSE	canonical	3	129	junction_10	16.9425499851705	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	NA	False	NA	NA	False	NA	NA	NA	106459299	106393161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790
tx.3806	chr11	-	4821	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-76	189	-76	57	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3255	False	NA	NA	False	NA	NA	NA	106503832	106393161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
tx.3807	chr11	-	4832	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-67	57	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	44.3034241163113	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3264	False	NA	NA	False	NA	NA	NA	106503823	106393161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503663
tx.3808	chr11	-	1378	8	NIC	ENSMUSG00000020718.13	novel	1506	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	16.8001457719623	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGGACTTTTGTA	4322	False	NA	NA	False	NA	NA	NA	106670338	106659078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669909
tx.3809	chr11	-	1536	8	FSM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	-32	2	-10	-2	multi-exon	FALSE	canonical	3	24	junction_7	14.9652659072089	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAGTTTTGGACTTTTG	4287	False	NA	NA	False	NA	NA	NA	106670373	106659080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669784
tx.381	chr1	-	8314	46	FSM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	3	-2	0	1	multi-exon	TRUE	canonical	3	1514	junction_37	371.719226311845	1453	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	71692331	71624680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
tx.3810	chr11	-	3520	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	38	1	0	-1	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	4194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	NA	False	NA	NA	NA	106679320	106671181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
tx.3811	chr11	-	3649	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	322	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	8969	False	NA	NA	False	NA	NA	NA	106680005	106671181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
tx.3812	chr11	-	3234	2	ISM	ENSMUSG00000020719.15	ENSMUST00000130172.2	589	3	-150	-1758	-150	-1	intron_retention	FALSE	canonical	3	4489	junction_1	0	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	33	False	NA	NA	False	NA	NA	NA	106674627	106671181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_106673083_106673294
tx.3813	chr11	+	3042	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	-339	-7	-316	0	multi-exon	FALSE	canonical	0	0	junction_10	15.3330523078346	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTTTGAATTTATAAC	4780	False	NA	NA	False	NA	NA	NA	106679761	106709686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
tx.3814	chr11	+	4688	7	NIC	ENSMUSG00000018372.14	novel	2597	19	NA	NA	-1332	0	intron_retention	FALSE	canonical	3	55	junction_1	6.37704215656966	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTTGAATTTATAACC	NA	False	NA	NA	False	NA	NA	NA	106701819	106709687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
tx.3815	chr11	-	5358	19	FSM	ENSMUSG00002076856.1_ENSMUSG00000018363.17	ENSMUST00000092517.9	3125	19	-272	-1961	19	2	multi-exon	FALSE	canonical	3	28	junction_17	7.74038631121946	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACTGAGTTTTTACTTG	NA	False	NA	NA	False	NA	NA	NA	106811568	106710889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
tx.3816	chr11	-	5419	20	Fusion	ENSMUSG00002076856.1_ENSMUSG00000018363.17	novel	2358	20	NA	NA	23	1	intron_retention	FALSE	canonical	3	9	junction_16	13.0135237562321	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACTGAGTTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	106811518	106710890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106759822_106759935_106762327_106762437_106766726_106766766_106811006
tx.3817	chr11	-	5303	18	FSM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	-11	-2	-11	2	multi-exon	TRUE	canonical	2	5	junction_17	11.382314941417	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACTGAGTTTTTACTTG	NA	False	NA	NA	False	NA	NA	NA	106811552	106710889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106811006
tx.3818	chr11	-	1976	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	77	1	-14	-1	multi-exon	FALSE	canonical	3	2002	junction_5	417.039386629129	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTGTTTTCTTAATTG	9743	False	NA	NA	False	NA	NA	NA	106890290	106879455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
tx.3819	chr11	-	6010	19	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-7415	464	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	13.2587031747657	15	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTGAATGTGCG	7686	False	NA	NA	False	NA	NA	NA	106965446	106925758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
tx.382	chr1	-	2491	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	2	-209	2	209	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	596	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGTGTGTGTTATATTT	4224	False	NA	NA	False	NA	NA	NA	72251464	72198391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
tx.3820	chr11	-	5218	18	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-6801	460	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	14.2297023533784	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAGGTCTCTTTGAATG	8300	False	NA	NA	False	NA	NA	NA	106964832	106925762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
tx.3821	chr11	-	9227	28	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	4	458	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_24	21.0343634190447	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGGAGGTCTCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	107022744	106925764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106986541_106986752_106990391_106990616_107001638_107002462_107022099
tx.3822	chr11	-	3072	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	89	-3	60	3	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	691	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAATGTCTCTCTTT	1190	False	NA	NA	False	NA	NA	NA	107080118	107057485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
tx.3823	chr11	-	3012	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	92	-6	63	6	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGTCTCTCTTTTTA	1193	False	NA	NA	False	NA	NA	NA	107080115	107057482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
tx.3824	chr11	-	2709	8	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-49	-3542	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.7177232318526	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGCTTCCCCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	107361574	107102259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_107103485_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
tx.3825	chr11	-	2829	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-49	-3541	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	82	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTTCCCCTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	107361574	107102258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
tx.3826	chr11	+	1817	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	21	66	21	-66	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	2273	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAACCAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	107370330	107388933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
tx.3827	chr11	+	6391	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1076	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	36.7501052969107	29	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9342	False	NA	NA	False	NA	NA	NA	107437679	107577769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
tx.3828	chr11	+	6398	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1022	1	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_16	42.866617256322	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTACATATGTTTGC	9396	False	NA	NA	False	NA	NA	NA	107437733	107577770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
tx.3829	chr11	+	6441	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1069	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	38.1200688409334	33	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9349	False	NA	NA	False	NA	NA	NA	107437686	107577769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
tx.383	chr1	-	1185	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	1	0	0	0	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTATCTTTTAAGGATT	NA	False	NA	NA	False	NA	NA	NA	72323472	72298330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
tx.3830	chr11	+	6244	32	FSM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	-26	0	4	0	multi-exon	FALSE	canonical	3	55	junction_15	38.7019615966116	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	NA	False	NA	NA	NA	107438759	107577769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
tx.3831	chr11	+	6296	33	FSM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	-32	6883	6	0	multi-exon	FALSE	canonical	3	95	junction_1	34.694973856994	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	NA	False	NA	NA	NA	107438761	107577769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
tx.3832	chr11	-	200	1	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	4	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGGATGATTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	107486895	107486695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_107486700_107486900
tx.3833	chr11	+	4074	3	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	124589	-2765	-411	2765	3prime_fragment	FALSE	canonical	3	220	junction_1	6.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTATCATGGGTAT	NA	False	NA	NA	False	NA	NA	NA	107563374	107580534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_107563872_107576116_107576370_107577210
tx.3834	chr11	-	3706	4	FSM	ENSMUSG00000020723.4	ENSMUST00000021066.4	3500	4	-205	-1	-205	1	multi-exon	FALSE	canonical	2	7	junction_1	2.62466929133727	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGATGTGGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	107685588	107623181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_107626145_107627552_107627694_107632746_107632831_107685070
tx.3835	chr11	-	3687	6	FSM	ENSMUSG00000040373.13	ENSMUST00000039071.3	3705	6	9	9	9	-9	multi-exon	FALSE	canonical	2	4	junction_5	1.72046505340853	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTATTCATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	107805872	107765505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_107768436_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107805725
tx.3836	chr11	-	3633	17	FSM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	-34	4810	-34	-20	multi-exon	FALSE	canonical	2	9	junction_8	3.24458683810435	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGACACAATTGTGCT	6250	False	NA	NA	False	NA	NA	NA	108234788	107829022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107872436_107872529_107874710_107874885_107877073_107877212_107903452_107903550_107903770_107903906_107905050_107905208_107944800_107944930_107948587_107948700_108082955_108083039_108231471_108231504_108234320
tx.3837	chr11	+	3189	6	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	37	386102	37	1720	5prime_fragment	FALSE	canonical	3	43	junction_4	6.34350061086148	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGTGACTTATGGCTT	NA	False	NA	NA	False	NA	NA	NA	108316054	108365339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842
tx.3838	chr11	+	3378	27	FSM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	74	1	0	0	multi-exon	TRUE	canonical	3	13	junction_14	12.2793543958426	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTTTTCTTTTTACAT	NA	False	NA	NA	False	NA	NA	NA	108316091	108751440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
tx.3839	chr11	+	3679	23	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	75	101814	1	1064	5prime_fragment	FALSE	canonical	3	13	junction_14	13.1724104359914	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACTTGTAAGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	108316092	108649627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495
tx.384	chr1	-	3500	6	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	-1	5548	-1	2276	5prime_fragment	FALSE	canonical	1	70	junction_3	74.7786065663168	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCTTTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	72323474	72303878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
tx.3840	chr11	+	4257	11	FSM	ENSMUSG00000000142.16	ENSMUST00000052915.14	4260	11	3	0	3	0	multi-exon	FALSE	canonical	3	13	junction_1	12.1720992437624	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	108811177	108841609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_108811388_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
tx.3841	chr11	+	4407	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	5.20096144957834	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	108811659	108841609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_108812020_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
tx.3842	chr11	+	4513	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.8015821992609	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	108812356	108841609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_108812823_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
tx.3844	chr11	-	975	12	NNC	ENSMUSG00000020599.14	novel	2313	17	NA	NA	8486	7970	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	5.1889902519383	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTGTTTGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	109180406	109138857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_109139004_109139804_109139867_109140852_109140883_109150661_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
tx.3845	chr11	-	4919	10	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	8486	1475	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	5.53774924194538	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATGACTGTCCTGACT	NA	False	NA	NA	False	NA	NA	NA	109180406	109145352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_109149526_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
tx.3846	chr11	-	2014	11	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	8487	-1323	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.0776981498753	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCAGCTCAGTTAAGTT	NA	False	NA	NA	False	NA	NA	NA	109180405	109148150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_109148571_109148676_109149526_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
tx.3847	chr11	-	1890	2	NNC	ENSMUSG00000056687.10	novel	2765	2	NA	NA	516	-93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	109253520	109246100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_109247820_109253349
tx.3848	chr11	-	1696	2	FSM	ENSMUSG00000056687.10	ENSMUST00000070956.4	2765	2	221	848	-190	-444	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTATGAGCTCCATGTCT	NA	False	NA	NA	False	NA	NA	NA	109254259	109246451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_109247820_109253931
tx.3849	chr11	+	1144	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	-23	-207	-23	207	multi-exon	TRUE	canonical	3	100	junction_2	132.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATACGTATACATTTAGG	NA	False	NA	NA	False	NA	NA	NA	109253633	109271508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_109254083_109256361_109256589_109271040
tx.385	chr1	+	2510	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	39	0	39	0	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	772	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	361	False	NA	NA	False	NA	NA	NA	72346624	72434111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
tx.3850	chr11	+	6171	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-12	1	-12	-1	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGTAGCACGACGTTAT	NA	False	NA	NA	False	NA	NA	NA	109253644	109292194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
tx.3851	chr11	+	1621	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	32	1163	2	-4	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTCTGTGTGGCCCTAG	NA	False	NA	NA	False	NA	NA	NA	109316803	109327811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
tx.3852	chr11	+	1899	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-74	7	-68	-7	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCATTCTGTGTGGCCC	NA	False	NA	NA	False	NA	NA	NA	109316977	109327808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
tx.3853	chr11	-	4012	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1388	-7	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAAGAGTCTGATGTTC	1182	False	NA	NA	False	NA	NA	NA	109365812	109341687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
tx.3854	chr11	-	4005	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	214	-1865	119	-6	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAGAGTCTGATGTTCT	3088	False	NA	NA	False	NA	NA	NA	109363906	109341686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
tx.3855	chr11	+	3313	13	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-48	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2.62466929133727	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCATTGCCATGATTTT	367	False	NA	NA	False	NA	NA	NA	109364151	109464153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_109364248_109369195_109369336_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109463044
tx.3856	chr11	-	5127	12	FSM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	11	-1800	11	-1	multi-exon	FALSE	canonical	1	33	junction_4	24.2817484087354	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGAGTTGTTTACATT	NA	False	NA	NA	False	NA	NA	NA	109502247	109464157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
tx.3857	chr11	-	2034	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	16	0	16	0	multi-exon	FALSE	canonical	1	33	junction_5	23.2491039253846	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	NA	False	NA	NA	NA	109502242	109464156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
tx.3858	chr11	+	3342	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	15	2	15	-2	multi-exon	TRUE	canonical	3	1417	junction_9	119.858458191318	1552	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGAATCAGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	109541761	109560480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
tx.3859	chr11	-	8249	39	FSM	ENSMUSG00000018800.15	ENSMUST00000043961.12	8231	39	-18	0	-18	0	multi-exon	FALSE	canonical	1	7	junction_11	4.33987183389395	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGACTTCAGTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	110228522	110160194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228310
tx.386	chr1	+	3051	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	8	0	8	0	multi-exon	FALSE	canonical	3	73	junction_6	11.1563813017483	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	72622417	72672293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
tx.3860	chr11	-	8142	39	NIC	ENSMUSG00000018800.15	novel	8231	39	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	4.51559317448456	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACAGACTTCAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	110228526	110160196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228419
tx.3861	chr11	+	2066	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	2	0	2	0	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGCATAGTATTAGTG	NA	False	NA	NA	False	NA	NA	NA	110289949	110404467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
tx.3862	chr11	-	1808	2	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGTAAATGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	113092666	112934728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_112935987_113092116
tx.3863	chr11	-	1896	3	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-45	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGTAAATGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	113092709	112934728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_112935987_112958167_112958213_113092116
tx.3864	chr11	-	2773	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.137222378063	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7767	False	NA	NA	False	NA	NA	NA	113456584	113135679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
tx.3865	chr11	-	2705	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	167.525785743237	68	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7745	False	NA	NA	False	NA	NA	NA	113456606	113135679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
tx.3866	chr11	-	2708	10	FSM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	-21	1	-1	-1	multi-exon	FALSE	canonical	0	0	junction_5	154.822558728882	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7745	False	NA	NA	False	NA	NA	NA	113456606	113135679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
tx.3867	chr11	-	2690	10	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_9	132.005985648052	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7739	False	NA	NA	False	NA	NA	NA	113456612	113135679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
tx.3868	chr11	+	2202	2	FSM	ENSMUSG00000047904.7	ENSMUST00000146390.3	2143	2	-59	0	-59	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAAGTAAGGTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	113510108	113516854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_113510449_113514992
tx.3869	chr11	+	3028	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	361	546	202	1	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	448	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	113540355	113553227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
tx.387	chr1	+	390	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	-22	190	-22	6	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	1210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTGCCTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	72750426	72752782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
tx.3870	chr11	-	2651	3	NNC	ENSMUSG00000041629.8	novel	2619	3	NA	NA	241	-1	intron_retention	FALSE	canonical	3	48	junction_2	675	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCCTAATTGGTTGGT	NA	False	NA	NA	False	NA	NA	NA	113574740	113552145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_113554370_113568129_113568230_113574413
tx.3871	chr11	-	2567	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	50	2	50	-2	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	361	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGCCTAATTGGTTGG	NA	False	NA	NA	False	NA	NA	NA	113574931	113552146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_113554370_113568129_113568230_113574687
tx.3872	chr11	+	2641	5	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	-12	0	intron_retention	TRUE	canonical	3	43	junction_1	113.778293184597	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113575253	113585473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_113576098_113578599_113580048_113582554_113582660_113583220_113583329_113585337
tx.3873	chr11	+	2072	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	-10	0	-3	0	multi-exon	FALSE	canonical	3	249	junction_1	30.335622624235	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113575262	113585473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
tx.3874	chr11	+	1965	4	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	111.645271582216	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTCTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113575263	113585472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_113575538_113578599_113580048_113583220_113583329_113585337
tx.3875	chr11	+	2168	5	FSM	ENSMUSG00000041623.18	ENSMUST00000042227.15	2196	5	28	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	114.630929508575	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113575265	113585473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_113575637_113578599_113580048_113582554_113582660_113583220_113583329_113585337
tx.3876	chr11	-	1324	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-107	1	combination_of_known_junctions	FALSE	canonical	3	87	junction_7	41.9649999939211	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	113600459	113588996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
tx.3877	chr11	-	2949	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	59	0	59	0	multi-exon	FALSE	canonical	3	115	junction_1	0	226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7422	False	NA	NA	False	NA	NA	NA	113642648	113617677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_113620492_113642513
tx.3878	chr11	+	346	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	25	0	1	0	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	756	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	114559374	114563157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
tx.3879	chr11	+	315	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	49	0	-12	0	multi-exon	FALSE	canonical	3	5140	junction_1	6068.87239835375	478	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	114559422	114563157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
tx.388	chr1	+	286	3	FSM	ENSMUSG00000046330.11	ENSMUST00000212432.2	665	3	400	-21	-44	0	multi-exon	FALSE	canonical	2	15690	junction_1	1470.5	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	72750872	72752776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_72750960_72751300_72751384_72752660
tx.3880	chr11	+	344	5	FSM	ENSMUSG00000057322.13	ENSMUST00000082092.5	345	5	1	0	1	0	multi-exon	FALSE	canonical	3	1304	junction_1	7543.63564122102	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	114559452	114563157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_114559512_114559606_114559641_114559731_114559793_114562559_114562683_114563090
tx.3881	chr11	+	3447	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	39	0	39	0	multi-exon	TRUE	canonical	3	173	junction_11	15.0937896237857	460	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCAGCTGAGTCACTT	NA	False	NA	NA	False	NA	NA	NA	114566295	114611803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
tx.3882	chr11	+	1884	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-63	3521	-63	0	5prime_fragment	FALSE	canonical	3	20	junction_1	8.2192186706253	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	865	False	NA	NA	False	NA	NA	NA	114742604	114759922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321
tx.3883	chr11	+	3719	5	FSM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-53	1	-53	-1	multi-exon	FALSE	canonical	3	20	junction_1	7.21110255092798	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGTTTCTAAGTG	875	False	NA	NA	False	NA	NA	NA	114742614	114763442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321_114759472_114761146
tx.3884	chr11	+	3723	5	NIC	ENSMUSG00000051043.17	novel	3667	5	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	13.4164078649987	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCCTGTGTGTTTCTA	967	False	NA	NA	False	NA	NA	NA	114742706	114763438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_114742813_114754292_114755373_114757450_114757546_114759321_114759472_114761146
tx.3885	chr11	+	1921	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	2	2	2	-2	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCCTCTGTGTCCTCCT	NA	False	NA	NA	False	NA	NA	NA	115054168	115072005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
tx.3886	chr11	-	1166	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103040.11	1204	7	37	1	2	-1	multi-exon	FALSE	canonical	2	2	junction_5	40.7553677446297	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCCTTGTTTGTTCAC	NA	False	NA	NA	False	NA	NA	NA	115078179	115073658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077944
tx.3887	chr11	-	1471	6	ISM	ENSMUSG00000015542.18	ENSMUST00000103040.11	1204	7	14	0	14	0	intron_retention	FALSE	canonical	2	2	junction_5	44.6345157921535	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	NA	False	NA	NA	NA	115078202	115073657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574
tx.3888	chr11	+	3167	11	NNC	ENSMUSG00000045980.14	novel	4564	10	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.0032139168121	47	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCCTCTTGCTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	115078332	115136594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195_115135637_115135758
tx.3889	chr11	+	3286	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	24	1254	0	5	multi-exon	FALSE	canonical	3	30	junction_1	6.92463842261461	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTCTTGCTTAAGGAC	NA	False	NA	NA	False	NA	NA	NA	115078336	115136595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
tx.389	chr1	-	5065	8	ISM	ENSMUSG00000055322.17	ENSMUST00000187691.7	2813	12	7448	-3679	7152	0	3prime_fragment	FALSE	canonical	3	66	junction_7	9.72058619211657	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGCCTGGCTTCGTT	2801	False	NA	NA	False	NA	NA	NA	73960224	73949390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116
tx.3890	chr11	-	4364	13	NIC	ENSMUSG00000020734.14	novel	4895	15	NA	NA	27	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	1.68942791105944	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCTAGCTGCCTCAC	5090	False	NA	NA	False	NA	NA	NA	115158042	115139994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_115141534_115141834_115142068_115143408_115143597_115144033_115144195_115144523_115144754_115144878_115145005_115146098_115146253_115146511_115146678_115146868_115147081_115148162_115148278_115148598_115149198_115151559_115151974_115157815
tx.3891	chr11	-	1879	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	69	0	-67	0	multi-exon	FALSE	canonical	3	83	junction_7	15.1766458254911	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	NA	False	NA	NA	NA	115167807	115158849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
tx.3892	chr11	-	1726	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	-47	3272	-47	-3272	multi-exon	FALSE	canonical	2	4	junction_5	1.6	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTGCTTTGTTCCATG	382	False	NA	NA	False	NA	NA	NA	115188387	115173719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
tx.3893	chr11	-	3247	19	FSM	ENSMUSG00000034586.15	ENSMUST00000106542.9	3276	19	28	1	-9	-1	multi-exon	FALSE	canonical	1	2	junction_16	3.88928569404159	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGTGTCTCTGTACA	8688	False	NA	NA	False	NA	NA	NA	115258554	115238533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250638_115251147_115251319_115252464_115252615_115258369
tx.3894	chr11	+	3732	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	-32	0	-32	0	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAAGTGACCCTGGGTCT	NA	False	NA	NA	False	NA	NA	NA	115272709	115286958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
tx.3895	chr11	+	3705	5	NNC	ENSMUSG00000050910.6	novel	3700	5	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.5767588763066	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGACCCTGGGTCTA	NA	False	NA	NA	False	NA	NA	NA	115272711	115286959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_115273202_115281336_115281450_115281688_115281838_115283484_115283650_115284171
tx.3896	chr11	+	752	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	-4	1	1	-1	multi-exon	FALSE	canonical	3	165	junction_1	353.082766501	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTTTCCAGTGAGAGC	NA	False	NA	NA	False	NA	NA	NA	115294578	115301744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
tx.3897	chr11	+	840	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	1	1755	1	0	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	115294578	115301745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
tx.3898	chr11	-	3326	3	FSM	ENSMUSG00000034566.11	ENSMUST00000141474.8	420	3	-2908	2	-9	-2	multi-exon	FALSE	canonical	3	2984	junction_1	128	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	NA	False	NA	NA	NA	115310752	115306516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115306706_115306840_115306904_115307678
tx.3899	chr11	-	554	5	FSM	ENSMUSG00000034566.11	ENSMUST00000180072.8	486	5	-11	-57	-11	-2	multi-exon	FALSE	canonical	3	2962	junction_4	275.878936310839	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	NA	False	NA	NA	NA	115309344	115306516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211
tx.390	chr1	-	6019	10	ISM	ENSMUSG00000055322.17	ENSMUST00000187691.7	2813	12	2965	-3679	2669	0	3prime_fragment	FALSE	canonical	3	66	junction_7	9.39266853573691	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGCCTGGCTTCGTT	NA	False	NA	NA	False	NA	NA	NA	73964707	73949390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864
tx.3900	chr11	-	598	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	24	3	-21	-3	multi-exon	FALSE	canonical	3	1974	junction_5	551.930285452792	328	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCGTCTCTGAGTAGATA	NA	False	NA	NA	False	NA	NA	NA	115310764	115306517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
tx.3901	chr11	-	2433	4	FSM	ENSMUSG00000034566.11	ENSMUST00000137563.8	510	4	-1927	4	13	-4	multi-exon	FALSE	canonical	3	2984	junction_1	272.998575494859	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCGTCTCTGAGTAGAT	NA	False	NA	NA	False	NA	NA	NA	115310775	115306518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664
tx.3902	chr11	+	1791	6	FSM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	-27	0	-27	0	multi-exon	FALSE	canonical	3	121	junction_1	5.67097875150313	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	3709	False	NA	NA	False	NA	NA	NA	115310926	115322100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115321138
tx.3903	chr11	+	2673	5	FSM	ENSMUSG00000016940.19	ENSMUST00000106533.8	2649	5	-25	1	-3	-1	multi-exon	FALSE	canonical	3	121	junction_1	5.97390157267426	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGTCTCTCCTTCA	3733	False	NA	NA	False	NA	NA	NA	115310950	115322099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105
tx.3904	chr11	+	2255	3	FSM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	6	-1	6	1	multi-exon	FALSE	canonical	3	16	junction_2	2.5	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTGCTAGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	115366498	115381294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115366854_115366947_115367092_115379538
tx.3905	chr11	-	851	5	FSM	ENSMUSG00000020736.13	ENSMUST00000021082.7	858	5	2	5	2	-5	multi-exon	FALSE	canonical	3	183	junction_4	11.1214882097676	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGAGGCTTTGGATCTTTG	NA	False	NA	NA	False	NA	NA	NA	115382686	115381250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115381571_115381678_115381794_115381963_115382025_115382096_115382198_115382432
tx.3906	chr11	-	1371	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.422046928452	799	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	115405211	115388178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_115389126_115392813_115392929_115393857_115394001_115405045
tx.3907	chr11	-	1025	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	25	1	-22	-1	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	1067	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTCTCTTTATTCTGA	NA	False	NA	NA	False	NA	NA	NA	115427077	115413928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
tx.3908	chr11	+	2089	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_16	299.37137842857	70	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	NA	False	NA	NA	NA	115455297	115474732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
tx.3909	chr11	+	2119	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	32	79	32	0	multi-exon	TRUE	canonical	3	862	junction_16	81.0315439264927	1042	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	NA	False	NA	NA	NA	115455291	115474732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
tx.391	chr1	-	10264	33	NIC	ENSMUSG00000055322.17	novel	9904	33	NA	NA	-65	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_32	15.0083310198036	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGGCCTGGCTTCG	NA	False	NA	NA	False	NA	NA	NA	74137900	73949392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74137380
tx.3910	chr11	-	3671	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_2	102.857436988047	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3547	False	NA	NA	False	NA	NA	NA	115494711	115475080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_115476667_115476911_115477044_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
tx.3911	chr11	-	3585	17	FSM	ENSMUSG00000020740.14	ENSMUST00000156173.8	3751	17	166	0	-1	0	multi-exon	FALSE	canonical	3	18	junction_3	101.135564188618	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3547	False	NA	NA	False	NA	NA	NA	115494711	115475080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
tx.3912	chr11	-	3592	17	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_13	83.8961178705546	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3546	False	NA	NA	False	NA	NA	NA	115494712	115475080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
tx.3913	chr11	-	3660	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	156	0	-2	0	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	720	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3537	False	NA	NA	False	NA	NA	NA	115494721	115475080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
tx.3914	chr11	+	2395	4	NIC	ENSMUSG00000046756.11	novel	1962	5	NA	NA	6	-444	intron_retention	TRUE	canonical	3	642	junction_3	43.1508980207828	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCTGGAGAGAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	115494756	115498418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_115495070_115495546_115495739_115495848_115496964_115497643
tx.3915	chr11	+	1514	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	11	437	11	-437	multi-exon	FALSE	canonical	3	642	junction_4	47.0451910401053	376	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGAGAGCTCAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	115494761	115498425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
tx.3916	chr11	-	1453	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	324	junction_4	32.8129166640212	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	NA	False	NA	NA	NA	115503750	115498743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503610
tx.3917	chr11	-	1328	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	44	0	2	0	multi-exon	FALSE	canonical	3	302	junction_2	38.1030182531515	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	NA	False	NA	NA	NA	115503751	115498743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
tx.3918	chr11	-	2085	5	FSM	ENSMUSG00000020743.16	ENSMUST00000106507.9	1656	5	-432	3	-8	-3	multi-exon	FALSE	canonical	3	302	junction_2	39.92101576864	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	NA	False	NA	NA	NA	115503761	115498746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728
tx.3919	chr11	-	2630	7	ISM	ENSMUSG00000020744.14	ENSMUST00000178003.8	2614	8	254	-5	52	-1	3prime_fragment	FALSE	canonical	2	19	junction_6	50.5854612402505	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTGACTGCAGACCAT	NA	False	NA	NA	False	NA	NA	NA	115518867	115505004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518462
tx.392	chr1	-	7239	33	NIC	ENSMUSG00000055322.17	novel	9916	33	NA	NA	9	1002	combination_of_known_junctions	FALSE	canonical	3	23	junction_32	14.0823124321789	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTAAATTGACAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	74130501	73952067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74130331
tx.3920	chr11	-	2282	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	24	1	9	-1	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTGACTGCAGACCAT	NA	False	NA	NA	False	NA	NA	NA	115518947	115505004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
tx.3921	chr11	-	1426	6	ISM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	3775	802	-1545	214	3prime_fragment	FALSE	canonical	3	138	junction_5	11.4612390255155	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTCACTCCTATAGC	NA	False	NA	NA	False	NA	NA	NA	115515196	115505805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024
tx.3922	chr11	-	2699	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	10	0	10	0	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	1158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCTTCATTTCTCC	4480	False	NA	NA	False	NA	NA	NA	115599413	115534870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
tx.3923	chr11	+	4917	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	1	-2	combination_of_known_junctions	TRUE	canonical	3	36	junction_13	20.1870029585754	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	NA	False	NA	NA	NA	115656269	115689857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
tx.3924	chr11	+	4983	32	FSM	ENSMUSG00000020747.19	ENSMUST00000093912.11	5329	32	11	335	1	-2	multi-exon	FALSE	canonical	3	50	junction_13	18.7440729445739	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	NA	False	NA	NA	NA	115656269	115689857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
tx.3925	chr11	-	7303	19	ISM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	-1047	-196	-1038	196	intron_retention	FALSE	canonical	3	37	junction_9	8.73212459828649	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCCAAAGGCTCATTTT	3073	False	NA	NA	False	NA	NA	NA	115705503	115689812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712
tx.3926	chr11	-	4948	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	-19	0	-10	0	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGTTTGCATCTG	4101	False	NA	NA	False	NA	NA	NA	115704475	115690008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
tx.3927	chr11	-	2513	3	ISM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	11567	3	-1182	-3	3prime_fragment	FALSE	canonical	3	63	junction_2	1	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTGTGTTTGCAT	6598	False	NA	NA	False	NA	NA	NA	115692889	115690011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_115690904_115691185_115691409_115691491
tx.3928	chr11	+	188	2	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTCTCATGGCAACCC	NA	False	NA	NA	False	NA	NA	NA	115694958	115754973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_+_115695106_115754932
tx.3929	chr11	+	2862	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-793	0	intron_retention	FALSE	canonical	3	180	junction_1	22.7063922038174	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5139	False	NA	NA	False	NA	NA	NA	115704756	115713915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
tx.393	chr1	-	6410	11	ISM	ENSMUSG00000055322.17	ENSMUST00000187691.7	2813	12	429	-3676	133	-3	3prime_fragment	FALSE	canonical	3	66	junction_7	8.94650769853802	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGTGGCCTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	73967243	73949393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070
tx.3930	chr11	+	1960	11	FSM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	14	5	-8	0	multi-exon	FALSE	canonical	3	156	junction_1	26.8730348118704	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5946	False	NA	NA	False	NA	NA	NA	115705563	115713915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
tx.3931	chr11	+	3789	27	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-5	-22	combination_of_known_junctions	TRUE	canonical	3	59	junction_1	202.96016457021	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6795	False	NA	NA	False	NA	NA	NA	115714869	115746582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
tx.3932	chr11	+	3528	26	FSM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	-1	24	-1	-22	multi-exon	FALSE	canonical	3	630	junction_7	88.2626444199357	1213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6799	False	NA	NA	False	NA	NA	NA	115714873	115746582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
tx.3933	chr11	+	3483	25	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-4	-22	combination_of_known_junctions	FALSE	canonical	3	54	junction_22	172.677761668954	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6796	False	NA	NA	False	NA	NA	NA	115714870	115746582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
tx.3934	chr11	-	3987	19	FSM	ENSMUSG00000020752.12	ENSMUST00000021097.10	3971	19	-18	2	-18	-2	multi-exon	TRUE	canonical	3	54	junction_14	12.1025708930881	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTCTTGGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	115824321	115783422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
tx.3935	chr11	+	3284	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	364	6	9	-6	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	284	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCTGCCTTTGGTTTTG	408	False	NA	NA	False	NA	NA	NA	115824471	115857545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
tx.3936	chr11	-	1343	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	3	60	3	-60	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	703	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTGCCTCCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	115903542	115899342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
tx.3937	chr11	-	2016	3	FSM	ENSMUSG00000016559.15	ENSMUST00000139378.2	773	3	-27	-1216	4	-332	multi-exon	FALSE	canonical	3	13934	junction_1	171	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTGTCAAACCTAAA	NA	False	NA	NA	False	NA	NA	NA	115915326	115913118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115914362_115914450_115914605_115914707
tx.3938	chr11	-	1659	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	4	330	4	-330	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	4683	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTGTCAAACCTAAATT	NA	False	NA	NA	False	NA	NA	NA	115915326	115913116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
tx.3939	chr11	+	3691	16	FSM	ENSMUSG00000020770.14	ENSMUST00000106452.2	3696	16	5	0	4	0	multi-exon	FALSE	canonical	3	42	junction_8	23.4630679058719	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8827	False	NA	NA	False	NA	NA	NA	115921152	115952040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
tx.394	chr1	-	7288	33	FSM	ENSMUSG00000055322.17	ENSMUST00000191104.7	9904	33	-73	2689	-73	990	multi-exon	FALSE	canonical	3	25	junction_32	13.8921276605673	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATAGGTAAA	NA	False	NA	NA	False	NA	NA	NA	74163681	73952079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
tx.3940	chr11	+	3730	16	FSM	ENSMUSG00000020770.14	ENSMUST00000021116.12	3735	16	5	0	4	0	multi-exon	FALSE	canonical	3	78	junction_13	17.1308688240459	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8827	False	NA	NA	False	NA	NA	NA	115921152	115952040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
tx.3941	chr11	+	3647	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	29.7564932223017	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8826	False	NA	NA	False	NA	NA	NA	115921151	115952040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949152_115949251_115949814_115950073_115950648
tx.3942	chr11	-	4224	32	FSM	ENSMUSG00000057948.13	ENSMUST00000106450.8	4046	32	-172	-6	19	6	multi-exon	TRUE	canonical	3	18	junction_15	5.60845207266718	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATAGTTGGCTTACAGTG	NA	False	NA	NA	False	NA	NA	NA	115968748	115952914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
tx.3943	chr11	-	1794	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	31	1	8	-1	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	1033	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTGACTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	115977790	115969399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
tx.3944	chr11	-	1282	3	FSM	ENSMUSG00000020773.12	ENSMUST00000127235.2	692	3	-3	-587	-3	0	multi-exon	FALSE	canonical	3	127	junction_2	17	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998569	115996577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115997468_115997757_115997830_115998249
tx.3945	chr11	-	1473	4	FSM	ENSMUSG00000020773.12	ENSMUST00000141531.8	1503	4	30	0	30	0	multi-exon	FALSE	canonical	3	121	junction_3	17.6131264181639	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998915	115996577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603
tx.3946	chr11	-	1487	4	FSM	ENSMUSG00000020773.12	ENSMUST00000134691.2	782	4	-65	-640	19	0	multi-exon	FALSE	canonical	3	54	junction_2	44.1437047229462	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998926	115996577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603
tx.3947	chr11	-	2201	6	FSM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	3	0	3	0	multi-exon	FALSE	canonical	3	54	junction_2	42.4951761968344	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	116001069	115996577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603_115998835_115999091_115999188_116000359
tx.3948	chr11	-	2201	6	FSM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	-9	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	39.5777715390849	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	116001072	115996577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603_115998835_115999091_115999188_116000359
tx.3949	chr11	-	2943	6	FSM	ENSMUSG00000054517.10	ENSMUST00000067632.4	3048	6	112	-7	110	7	multi-exon	FALSE	canonical	1	1	junction_2	0.489897948556636	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTCTTTCTTTAAATTT	8261	False	NA	NA	False	NA	NA	NA	116021840	116015526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116017467_116017987_116018054_116018263_116018442_116018523_116018758_116019021_116019118_116021411
tx.395	chr1	-	7975	15	ISM	ENSMUSG00000055322.17	ENSMUST00000187584.7	9916	33	137754	7	9446	-7	3prime_fragment	FALSE	canonical	3	55	junction_11	10.898651854468	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCAGCCTGTGGCCTGG	9184	False	NA	NA	False	NA	NA	NA	73992756	73949397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579
tx.3950	chr11	-	1349	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	58	4	-21	0	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	520	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	465	False	NA	NA	False	NA	NA	NA	116029636	116022646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
tx.3951	chr11	-	5272	30	FSM	ENSMUSG00000020776.19	ENSMUST00000103031.8	5252	30	-20	0	-7	0	multi-exon	FALSE	canonical	3	14	junction_29	8.33099451920079	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTGGATTTGCAT	NA	False	NA	NA	False	NA	NA	NA	116058999	116033110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058377
tx.3952	chr11	-	5375	31	NIC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_30	9.85455337507602	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTGGATTTGCAT	NA	False	NA	NA	False	NA	NA	NA	116059006	116033110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058377
tx.3953	chr11	-	5265	30	NIC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_29	8.41449968768522	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTGGATTTGCAT	NA	False	NA	NA	False	NA	NA	NA	116058995	116033110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058377
tx.3954	chr11	-	3805	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	182	0	-62	0	multi-exon	TRUE	canonical	3	53	junction_12	15.262593015675	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	116089689	116062713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
tx.3955	chr11	-	3976	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	-233	0	11	0	multi-exon	FALSE	canonical	2	9	junction_11	29.8427833148373	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	116089860	116062713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
tx.3956	chr11	-	1891	9	ISM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	-3	5983	-3	1849	5prime_fragment	FALSE	canonical	3	53	junction_7	16.7663166795811	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACAATTCGAAAGTTCC	NA	False	NA	NA	False	NA	NA	NA	116089874	116068696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
tx.3957	chr11	+	886	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	15	1	15	-1	multi-exon	FALSE	canonical	3	95	junction_3	16.0277537068951	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGTGTGTGCTGATGCG	9082	False	NA	NA	False	NA	NA	NA	116089695	116106143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
tx.3958	chr11	-	2430	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	96	0	14	0	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	1076	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9913	False	NA	NA	False	NA	NA	NA	116164947	116135991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
tx.3959	chr11	-	2304	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	7	894	0	168	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCACCCTGGTCTGCTT	8927	False	NA	NA	False	NA	NA	NA	116197553	116179720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
tx.396	chr1	+	1419	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	20	0	0	0	multi-exon	TRUE	canonical	3	1389	junction_1	306.215936881149	697	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7848	False	NA	NA	False	NA	NA	NA	74275675	74307368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
tx.3960	chr11	-	4653	19	FSM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-40	6	-12	-6	multi-exon	TRUE	canonical	3	28	junction_1	6.47335469348423	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAATTCGTTTGTGAACG	3309	False	NA	NA	False	NA	NA	NA	116303870	116227184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116229657_116235020_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
tx.3961	chr11	-	2831	18	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-32	7184	-4	-5131	5prime_fragment	FALSE	canonical	3	29	junction_7	6.30482870916436	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGCCCATCCTGCA	3317	False	NA	NA	False	NA	NA	NA	116303862	116234362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
tx.3962	chr11	+	1473	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	6	3	6	-3	multi-exon	TRUE	canonical	3	1535	junction_2	51	809	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTTTGTGTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	116324925	116329900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_116325255_116325384_116325448_116328819
tx.3963	chr11	-	1831	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	2	8	2	-8	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	750	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGTCGGCTGCTGA	NA	False	NA	NA	False	NA	NA	NA	116381172	116361678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
tx.3964	chr11	-	5190	18	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_10	40.7732356749479	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGGGGGAGTTGGC	7405	False	NA	NA	False	NA	NA	NA	116472333	116428565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435946_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
tx.3965	chr11	-	5243	18	FSM	ENSMUSG00000020802.9	ENSMUST00000082152.5	5205	18	-41	3	-41	-3	multi-exon	FALSE	canonical	2	105	junction_3	24.8790847526891	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTTTGGGGGGAGTT	7424	False	NA	NA	False	NA	NA	NA	116472314	116428568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
tx.3966	chr11	-	2949	5	ISM	ENSMUSG00000020802.9	ENSMUST00000134102.2	3550	9	2093	8	2093	-8	3prime_fragment	FALSE	canonical	2	105	junction_3	40.1520547419432	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCATTTTTTTGGGGG	1057	False	NA	NA	False	NA	NA	NA	116432750	116428573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164
tx.3967	chr11	-	4091	10	ISM	ENSMUSG00000020802.9	ENSMUST00000082152.5	5205	18	36630	-63	-800	63	3prime_fragment	FALSE	canonical	2	105	junction_3	27.5873472518664	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGGCTGATGTTGCT	NA	False	NA	NA	False	NA	NA	NA	116435643	116428502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173
tx.3968	chr11	-	3536	18	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	29.3256386048927	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	NA	False	NA	NA	NA	116515123	116488990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116490265_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
tx.3969	chr11	-	3676	19	FSM	ENSMUSG00000020806.16	ENSMUST00000103029.10	3593	19	-83	0	-36	0	multi-exon	FALSE	canonical	2	65	junction_12	15.7409586041568	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	NA	False	NA	NA	NA	116515109	116488990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
tx.397	chr1	+	1609	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	17	-222	-16	0	multi-exon	FALSE	canonical	3	1867	junction_3	197.32307280632	321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7865	False	NA	NA	False	NA	NA	NA	74275692	74307368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
tx.3970	chr11	+	2708	3	ISM	ENSMUSG00000020812.19	ENSMUST00000239363.2	1631	4	57	-2	1	0	intron_retention	FALSE	canonical	3	180	junction_1	1	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTAGCATTGTGGG	NA	False	NA	NA	False	NA	NA	NA	116562486	116566621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_116563565_116564763_116564898_116565125
tx.3971	chr11	+	864	6	FSM	ENSMUSG00000020812.19	ENSMUST00000139934.8	865	6	1	0	1	0	multi-exon	FALSE	canonical	3	112	junction_5	27.7632851082144	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	116562486	116566624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
tx.3972	chr11	+	2000	5	FSM	ENSMUSG00000020812.19	ENSMUST00000106378.8	1988	5	-12	0	-3	0	multi-exon	FALSE	canonical	3	135	junction_1	18.9340962287615	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	116562482	116566624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125
tx.3973	chr11	+	1592	4	FSM	ENSMUSG00000020812.19	ENSMUST00000239363.2	1631	4	44	-5	-12	0	multi-exon	FALSE	canonical	3	112	junction_3	32.5371582450998	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	116562473	116566624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_116563565_116564763_116564898_116565125_116565202_116566333
tx.3974	chr11	-	2738	8	NNC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	-40	-811	intron_retention	TRUE	canonical	3	10	junction_3	7.67184090405574	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCACATTTCCAGTC	NA	False	NA	NA	False	NA	NA	NA	116585475	116567525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_116568508_116569291_116569392_116570732_116570916_116572684_116572789_116575171_116576092_116576661_116576837_116581137_116581199_116585262
tx.3975	chr11	-	2235	9	FSM	ENSMUSG00000057286.7	ENSMUST00000079545.6	3643	9	8	1400	8	-814	multi-exon	FALSE	canonical	3	12	junction_5	7.34421541078419	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTTTCCACATTTCCA	NA	False	NA	NA	False	NA	NA	NA	116585686	116567528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116568508_116569291_116569392_116570732_116570817_116572684_116572789_116575171_116575311_116575922_116576092_116576661_116576837_116581137_116581199_116585262
tx.3976	chr11	-	1739	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	-9	333	-9	-333	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAAATATGGAGACCGG	6317	False	NA	NA	False	NA	NA	NA	116718881	116694220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
tx.3977	chr11	-	1441	5	ISM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	571	0	-158	0	3prime_fragment	FALSE	canonical	3	250	junction_2	32.8252951243397	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	116733704	116728257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157
tx.3978	chr11	-	1706	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	-38	0	-38	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	116734313	116728257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
tx.3979	chr11	-	1803	7	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	131.15311238735	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	116734316	116728257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116728590_116729815_116729955_116730663_116730758_116731235_116731372_116731894_116732182_116733157_116733547_116733890
tx.398	chr1	-	1779	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	34	4	-24	2	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	591	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	NA	False	NA	NA	NA	74323863	74319002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
tx.3980	chr11	-	1670	6	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	113.206713581837	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	116734315	116728257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116728590_116729815_116729955_116731273_116731372_116731894_116732182_116733157_116733547_116733890
tx.3981	chr11	-	1894	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	1	4	1	-1	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	1546	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	6004	False	NA	NA	False	NA	NA	NA	116743919	116740730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_116741788_116742846_116743158_116743393
tx.3982	chr11	-	2953	2	NIC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1775	junction_1	0	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	6004	False	NA	NA	False	NA	NA	NA	116743919	116740730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_116743158_116743393
tx.3983	chr11	+	2574	14	NNC	ENSMUSG00000020818.17	novel	2586	14	NA	NA	42	0	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_1	22.2938949373879	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	NA	False	NA	NA	NA	116743307	116765538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_116743687_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
tx.3984	chr11	+	2338	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.80424857096892	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	NA	False	NA	NA	NA	116744586	116765538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
tx.3985	chr11	+	2434	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-59	923	-1	0	multi-exon	FALSE	canonical	3	74	junction_12	6.07076326887045	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	NA	False	NA	NA	NA	116744586	116765538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
tx.3986	chr11	+	4240	17	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	6.60462669270565	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGGTGGGATTTTT	1814	False	NA	NA	False	NA	NA	NA	116809694	116877768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
tx.3987	chr11	+	3188	7	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	150	4	intron_retention	FALSE	canonical	1	4	junction_1	12.0369800568452	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGGTGGGATTTTTTG	NA	False	NA	NA	False	NA	NA	NA	116864048	116877770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_116865024_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
tx.3989	chr11	+	594	2	FSM	ENSMUSG00000086859.5	ENSMUST00000149822.3	600	2	6	0	1	0	multi-exon	FALSE	canonical	3	615	junction_1	0	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	881	False	NA	NA	False	NA	NA	NA	116967614	116969781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_116968029_116969601
tx.399	chr1	-	2902	9	ISM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	-14	-2	-14	2	intron_retention	FALSE	canonical	3	1233	junction_8	52.5522061858491	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	NA	False	NA	NA	NA	74323853	74319002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
tx.3990	chr11	+	4708	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-57	3	9	0	multi-exon	TRUE	canonical	3	319	junction_5	24.9420662068455	514	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGTGTCCTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	117006006	117050091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
tx.3991	chr11	+	4299	17	FSM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	-6	-1704	-6	-2	multi-exon	FALSE	canonical	2	9	junction_16	87.2585955651362	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	117006057	117050089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117048084
tx.3992	chr11	+	3600	12	FSM	ENSMUSG00000059248.14	ENSMUST00000093907.11	3616	12	4	12	4	0	multi-exon	FALSE	canonical	3	27	junction_1	260.952736292441	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	3702	False	NA	NA	False	NA	NA	NA	117090490	117253139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
tx.3993	chr11	+	3837	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	-53	0	-53	0	multi-exon	FALSE	canonical	3	88	junction_1	218.744622791053	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	643	False	NA	NA	False	NA	NA	NA	117157018	117253139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
tx.3994	chr11	+	3718	10	ISM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	23868	0	-18040	0	3prime_fragment	FALSE	canonical	3	104	junction_1	170.013797551918	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	117180939	117253139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
tx.3995	chr11	+	2847	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	74	11	-9	0	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	423	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	117223244	117253139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
tx.3996	chr11	+	7813	21	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-16	299	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	19.6913051878234	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117545622	117653389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
tx.3997	chr11	+	4212	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	-20	39266	-20	-25128	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTTTCTTTAATTG	NA	False	NA	NA	False	NA	NA	NA	117545618	117614999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
tx.3998	chr11	+	7676	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-9	19	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCATTTAAAACA	NA	False	NA	NA	False	NA	NA	NA	117545629	117653109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
tx.3999	chr11	+	6488	17	NIC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	295	321	combination_of_known_splicesites	FALSE	canonical	3	46	junction_6	21.6274384463348	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAGAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117612138	117653411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
tx.4	chr1	+	2477	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	26	4	19	-4	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	1047	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATTGCTTTATATAGTAC	NA	False	NA	NA	False	NA	NA	NA	4878071	4916958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
tx.400	chr1	+	617	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	123	0	-1	0	multi-exon	FALSE	canonical	3	1381	junction_1	89	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCAGGTTGAATTTGT	NA	False	NA	NA	False	NA	NA	NA	74324211	74326613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74324297_74325000_74325170_74326250
tx.4000	chr11	+	6320	18	FSM	ENSMUSG00000025571.14	ENSMUST00000138299.2	6612	18	589	-297	589	297	multi-exon	FALSE	canonical	3	68	junction_6	17.8043966421889	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117612432	117653387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
tx.4001	chr11	+	4400	17	ISM	ENSMUSG00000025571.14	ENSMUST00000138299.2	6612	18	11150	-321	-10333	321	3prime_fragment	FALSE	canonical	3	68	junction_5	17.7525306294624	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAGAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117622993	117653411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
tx.4002	chr11	-	2911	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	-43	-3	-24	3	multi-exon	TRUE	canonical	3	224	junction_9	41.6618095045227	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	NA	False	NA	NA	NA	117671508	117656810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
tx.4003	chr11	-	2900	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-25	3	at_least_one_novel_splicesite	TRUE	canonical	3	72	junction_9	62.8793418727409	65	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	NA	False	NA	NA	NA	117671509	117656810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
tx.4004	chr11	+	2662	16	FSM	ENSMUSG00000050106.19	ENSMUST00000106334.9	2644	16	-7	-11	-7	11	multi-exon	FALSE	canonical	2	4	junction_1	5.15708789488366	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGAATTTCTTGGACAA	7625	False	NA	NA	False	NA	NA	NA	117673133	117683947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117673235_117673875_117674097_117674220_117674370_117674596_117674747_117674935_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681607_117681733_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
tx.4005	chr11	+	1518	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	2	0	2	0	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	549	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	117700495	117705109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
tx.4006	chr11	+	1400	3	FSM	ENSMUSG00000048277.16	ENSMUST00000175737.2	785	3	-66	-549	-22	-2	multi-exon	FALSE	canonical	3	9	junction_2	289.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	False	NA	NA	False	NA	NA	NA	117700471	117705107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117700630_117703284_117703523_117704103
tx.4007	chr11	+	1412	4	FSM	ENSMUSG00000048277.16	ENSMUST00000120928.2	1402	4	-10	0	3	0	multi-exon	FALSE	canonical	3	55	junction_1	286.604256772296	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	117700511	117705109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117700630_117703374_117703523_117703871_117704012_117704103
tx.4008	chr11	+	4143	3	NIC	ENSMUSG00000048277.16	novel	1520	4	NA	NA	4	0	intron_retention	FALSE	canonical	3	622	junction_2	37.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	117700525	117705109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_117703523_117703871_117704012_117704103
tx.4009	chr11	-	2113	5	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	242	-15	-3	15	intron_retention	FALSE	canonical	3	985	junction_3	61.9732805328232	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGGGTTTCCCTAACT	NA	False	NA	NA	False	NA	NA	NA	117716676	117706336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496
tx.401	chr1	+	2930	10	FSM	ENSMUSG00000026179.15	ENSMUST00000027370.13	2937	10	9	-2	0	0	multi-exon	FALSE	canonical	3	54	junction_2	408.826988068106	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTCTGAGCTCTCAAT	NA	False	NA	NA	False	NA	NA	NA	74324212	74392845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74324297_74325000_74325170_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
tx.4010	chr11	-	1223	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	233	-16	8	16	multi-exon	FALSE	canonical	3	796	junction_5	107.729084074615	426	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGTTTCCCTAACTT	NA	False	NA	NA	False	NA	NA	NA	117716685	117706335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
tx.4011	chr11	+	2687	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	-362	2	-362	-2	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGGTTTTCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	117716387	117730732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
tx.4012	chr11	+	913	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	38	-4	-30	4	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	661	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTGTCTGTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	117740114	117746562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
tx.4013	chr11	-	2549	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	3	0	3	0	multi-exon	FALSE	canonical	3	1319	junction_1	0	2129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	117860009	117856904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_117859145_117859700
tx.4014	chr11	+	2291	10	FSM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	572	0	-21	0	multi-exon	TRUE	canonical	1	116	junction_9	67.5268579397108	354	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	117877689	117914837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
tx.4015	chr11	+	4293	3	FSM	ENSMUSG00000017715.12	ENSMUST00000155507.2	3113	3	-1180	0	-1180	0	multi-exon	FALSE	canonical	1	116	junction_2	125.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	117901988	117914837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_117905549_117910432_117910559_117914230
tx.4016	chr11	-	3160	13	FSM	ENSMUSG00000017132.18	ENSMUST00000017276.14	3135	13	-21	-4	11	4	multi-exon	FALSE	canonical	3	24	junction_4	8.05665701282003	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCATGTTCTGCTCTGCT	8611	False	NA	NA	False	NA	NA	NA	118139407	118054996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
tx.4017	chr11	-	1740	10	NNC	ENSMUSG00000017132.18	novel	545	6	NA	NA	10	3868	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	11.5256022043466	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGTCCGAGTTTAGG	8610	False	NA	NA	False	NA	NA	NA	118139408	118071929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_118072737_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
tx.4018	chr11	-	3002	6	FSM	ENSMUSG00000033909.18	ENSMUST00000141647.8	3815	6	810	3	810	-3	multi-exon	FALSE	canonical	3	141	junction_5	19.8655480669424	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	118156064	118150482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523
tx.4019	chr11	-	3712	8	ISM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	21111	6	-3072	-3	3prime_fragment	FALSE	canonical	3	124	junction_6	25.3707207108461	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	118159946	118150482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369
tx.402	chr1	-	2153	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	223	2	33	-2	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTGAGTTGCTGTGGC	NA	False	NA	NA	False	NA	NA	NA	74343341	74327407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
tx.4020	chr11	-	5532	22	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	41.9506242537992	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	118180993	118150482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178425_118178453_118178572_118178650_118180782
tx.4021	chr11	-	5613	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	36	6	-15	-3	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	118181021	118150482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
tx.4022	chr11	-	3534	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	180	-5	180	5	multi-exon	FALSE	canonical	3	24	junction_3	3.74165738677394	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTTGATTCCTTGGCTG	2446	False	NA	NA	False	NA	NA	NA	118246152	118191889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
tx.4023	chr11	-	2844	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	29	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	37.662979170533	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9021	False	NA	NA	False	NA	NA	NA	118309849	118297114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309755
tx.4024	chr11	-	4120	4	FSM	ENSMUSG00000025575.15	ENSMUST00000017620.10	4182	4	62	0	-1	0	multi-exon	FALSE	canonical	3	163	junction_2	3.68178700572909	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9020	False	NA	NA	False	NA	NA	NA	118309850	118297114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399
tx.4025	chr11	-	2997	5	FSM	ENSMUSG00000025575.15	ENSMUST00000092378.10	2995	5	-1	-1	-1	0	multi-exon	TRUE	canonical	3	9	junction_4	68.7786304021823	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9020	False	NA	NA	False	NA	NA	NA	118309850	118297114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309755
tx.4026	chr11	-	2804	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106287.8	1476	5	27	-1355	-2	0	multi-exon	FALSE	canonical	3	11	junction_4	67.913547985656	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9019	False	NA	NA	False	NA	NA	NA	118309851	118297114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309797
tx.4027	chr11	+	2533	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	-3	11	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTCTTTTGAGAATGG	NA	False	NA	NA	False	NA	NA	NA	118367763	118378610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
tx.4028	chr11	+	2527	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	112	1425	0	11	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTCTTTTGAGAATGG	NA	False	NA	NA	False	NA	NA	NA	118367766	118378610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
tx.4029	chr11	+	3727	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	80	0	80	0	multi-exon	TRUE	canonical	3	204	junction_1	10.9630059746403	321	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTGTTCTCTTCCCC	NA	False	NA	NA	False	NA	NA	NA	118913867	118922096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
tx.403	chr1	+	2847	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	12	0	12	0	multi-exon	FALSE	canonical	3	63	junction_1	11.428445869846	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTCTGAGCTCTCAAT	9375	False	NA	NA	False	NA	NA	NA	74371780	74392845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
tx.4030	chr11	-	1385	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	61	2134	3	614	multi-exon	TRUE	canonical	3	19	junction_4	2.91547594742265	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCTTTTATTTAAACG	NA	False	NA	NA	False	NA	NA	NA	118931734	118929264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
tx.4031	chr11	-	2644	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-47	2582	-47	1218	multi-exon	FALSE	canonical	3	62	junction_3	7	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTCCGAGATTAGCT	NA	False	NA	NA	False	NA	NA	NA	118977094	118970980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
tx.4032	chr11	+	3155	14	NIC	ENSMUSG00000039963.21	novel	799	5	NA	NA	-96	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.428257835269	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGTTAAGACACATTTA	2706	False	NA	NA	False	NA	NA	NA	119129447	119156074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_119129599_119133252_119133411_119133538_119133662_119133822_119133945_119136660_119136905_119136993_119137177_119141764_119142011_119142628_119142843_119144075_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
tx.4033	chr11	+	3375	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	-11	-1	-11	1	multi-exon	TRUE	canonical	3	38	junction_1	100.783495768854	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	NA	False	NA	NA	NA	119158840	119176281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
tx.4034	chr11	+	3476	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	158	-1	17	1	multi-exon	FALSE	canonical	3	393	junction_7	40.3001893687597	869	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	NA	False	NA	NA	NA	119158870	119176281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
tx.4035	chr11	-	1479	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	30	0	30	0	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	923	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	NA	False	NA	NA	NA	119190885	119179188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
tx.4036	chr11	-	4236	6	NNC	ENSMUSG00000005043.14	novel	4357	8	NA	NA	1404	8	intron_retention	FALSE	canonical	0	0	junction_2	6.20966987850401	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTCTTTTATTAACAT	NA	False	NA	NA	False	NA	NA	NA	119242121	119234299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_119237664_119238513_119238624_119240365_119240448_119240802_119240960_119241227_119241379_119241749
tx.4037	chr11	-	4329	8	FSM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	16	12	-10	4	multi-exon	FALSE	canonical	2	7	junction_4	3.49927106111883	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCTTAATGTCTTCA	6152	False	NA	NA	False	NA	NA	NA	119246346	119234319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_119237664_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
tx.4038	chr11	+	2657	17	FSM	ENSMUSG00000039908.15	ENSMUST00000050880.8	2695	17	8	30	8	0	multi-exon	FALSE	canonical	3	19	junction_1	16.3122605346408	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATACAATATTCTG	NA	False	NA	NA	False	NA	NA	NA	119246390	119271875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
tx.4039	chr11	+	8938	40	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-36324	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	27.8500729168294	17	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	119332558	119378244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
tx.404	chr1	+	2199	13	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	1453	0	-1	0	3prime_fragment	FALSE	canonical	2	4	junction_7	13.8774397254441	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	6424	False	NA	NA	False	NA	NA	NA	74415814	74425221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
tx.4040	chr11	+	9616	40	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-36996	3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	29.023828882455	11	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTCCTGTTTGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	119331886	119378247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340067_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
tx.4041	chr11	+	4623	16	NIC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-9107	0	intron_retention	FALSE	canonical	3	92	junction_3	20.2730253182784	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	4194	False	NA	NA	False	NA	NA	NA	119359775	119378244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
tx.4042	chr11	+	3111	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	29	1930	1	-86	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTGTCTGGGGAGCCT	6283	False	NA	NA	False	NA	NA	NA	119382201	119400319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
tx.4043	chr11	+	3167	8	FSM	ENSMUSG00000039850.17	ENSMUST00000106245.9	5126	8	14	1945	14	-87	multi-exon	FALSE	canonical	3	37	junction_3	3.65892813567591	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGTGTCTGGGGAGCC	6551	False	NA	NA	False	NA	NA	NA	119382469	119400318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
tx.4044	chr11	+	4421	3	ISM	ENSMUSG00000039850.17	ENSMUST00000132015.2	778	4	770	-4076	770	28	3prime_fragment	FALSE	canonical	3	40	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGCTTGGTTTTACTT	165	False	NA	NA	False	NA	NA	NA	119393573	119402291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_119393654_119395916_119395994_119398027
tx.4045	chr11	-	5216	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	0	1	0	-1	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTCATTGGATTCT	NA	False	NA	NA	False	NA	NA	NA	119438579	119429545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
tx.4046	chr11	+	6748	34	FSM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	-153	-1	1	1	multi-exon	TRUE	canonical	3	92	junction_14	15.8664073872836	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCGCTGCCCTTGCCAGA	2151	False	NA	NA	False	NA	NA	NA	119493821	119790234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
tx.4047	chr11	+	1551	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	4	2	4	-2	multi-exon	FALSE	canonical	3	311	junction_5	11.6303613925986	309	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGTTTAGTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	119804639	119810372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
tx.4048	chr11	+	2069	14	FSM	ENSMUSG00000025372.17	ENSMUST00000026436.10	2394	14	325	0	-28	0	multi-exon	TRUE	canonical	3	19	junction_13	8.07215976759687	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	119833913	119897608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119897184
tx.4049	chr11	-	3596	26	FSM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	-19	1	-19	-1	multi-exon	FALSE	canonical	0	0	junction_17	26.0287840668749	256	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCACCTGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	119977672	119955256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
tx.405	chr1	+	1143	5	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	8447	0	50	0	3prime_fragment	FALSE	canonical	3	29	junction_1	7.87400787401181	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	4371	False	NA	NA	False	NA	NA	NA	74422808	74425221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
tx.4050	chr11	-	2752	13	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	21.0797098335501	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACTTGGGCTGGTTG	NA	False	NA	NA	False	NA	NA	NA	119989521	119981354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987390_119987501_119987703_119987796_119988334_119988408_119989451
tx.4051	chr11	-	2739	13	FSM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	32	-1	1	1	multi-exon	FALSE	canonical	3	76	junction_11	8.42944574426786	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCACTTGGGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	119989525	119981355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
tx.4052	chr11	+	498	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	0	283	0	8	multi-exon	FALSE	canonical	3	883	junction_2	30.5	148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTCTCTCCCAAGGAC	NA	False	NA	NA	False	NA	NA	NA	119989753	119991248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_119989892_119989973_119990085_119990999
tx.4053	chr11	-	4040	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	27	487	1	5	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	805	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	5023	False	NA	NA	False	NA	NA	NA	120042145	119995272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
tx.4054	chr11	+	4000	3	ISM	ENSMUSG00000039741.16	ENSMUST00000118987.2	10712	27	50249	0	-2845	0	3prime_fragment	FALSE	canonical	3	30	junction_2	4.5	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGGTCCGGATTGTG	NA	False	NA	NA	False	NA	NA	NA	120177773	120183108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_120178931_120180133_120180371_120180502
tx.4055	chr11	-	1903	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	48	1	1	0	multi-exon	TRUE	canonical	3	5636	junction_4	454.292680988809	5206	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	120239320	120236516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
tx.4056	chr11	-	2822	8	ISM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	1134	-2	844	2	3prime_fragment	FALSE	canonical	1	16	junction_4	19.219462924391	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTGTGCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	120268456	120260385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531
tx.4057	chr11	-	3258	9	FSM	ENSMUSG00000025384.16	ENSMUST00000135635.8	3766	9	1	507	1	0	multi-exon	FALSE	canonical	1	16	junction_4	18.3809514171601	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	120269560	120260387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153
tx.4058	chr11	-	3175	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	18	0	-10	0	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	120269572	120260387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
tx.4059	chr11	-	4100	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	21	0	21	0	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	713	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGCTCCCAGTGCATT	NA	False	NA	NA	False	NA	NA	NA	120328513	120271195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
tx.406	chr1	+	2509	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	76	291	76	-288	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGCCTCTGTGGTTTTTG	3386	False	NA	NA	False	NA	NA	NA	74430743	74436153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
tx.4060	chr11	-	788	2	FSM	ENSMUSG00000039670.3	ENSMUST00000137632.2	372	2	-132	-284	0	5	multi-exon	FALSE	canonical	2	7	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGGCTTTTGTGTTGTCC	959	False	NA	NA	False	NA	NA	NA	120348894	120347426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120347989_120348668
tx.4061	chr11	-	794	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	22	-3	22	3	multi-exon	FALSE	canonical	3	42	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGGGCTTTTGTGTTGT	981	False	NA	NA	False	NA	NA	NA	120348872	120347428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120347989_120348638
tx.4062	chr11	+	2768	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	9	1	-2	0	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	154	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATGAGAACATTCTTGT	217	False	NA	NA	False	NA	NA	NA	120348949	120355183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
tx.4063	chr11	-	1355	5	NNC	ENSMUSG00000057594.13	novel	911	5	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.9048658414922	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTCTTGGCCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	120358300	120355693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007_120358065_120358186
tx.4064	chr11	+	2869	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	32	-1	32	1	multi-exon	FALSE	canonical	3	286	junction_14	47.8204313112466	508	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGATTGATTGTTCGG	8214	False	NA	NA	False	NA	NA	NA	120358492	120374806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
tx.4065	chr11	+	3155	21	ISM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	33	-1	33	1	intron_retention	FALSE	canonical	3	286	junction_14	46.7074940453885	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGATTGATTGTTCGG	8215	False	NA	NA	False	NA	NA	NA	120358493	120374806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840
tx.4066	chr11	+	957	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	46	313	46	295	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	454	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTGTCCTGAACCT	9001	False	NA	NA	False	NA	NA	NA	120375484	120379578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
tx.4067	chr11	+	1986	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	37	0	-11	0	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	False	NA	NA	False	NA	NA	NA	120382702	120390013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
tx.4068	chr11	-	3192	4	ISM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	2741	0	2715	0	3prime_fragment	FALSE	canonical	3	389	junction_1	9.46337971105226	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCATGGCAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	120437812	120433713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702
tx.4069	chr11	-	1187	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	18	0	-8	0	multi-exon	FALSE	canonical	3	334	junction_4	30.2861354418156	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCATGGCAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	120440535	120433713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
tx.4070	chr11	-	2477	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	380	4	-32	3	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	3055	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTCACTGCTGCTTTA	3747	False	NA	NA	False	NA	NA	NA	120463699	120451127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
tx.4071	chr11	-	1843	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	23	1	23	-1	multi-exon	TRUE	canonical	3	3168	junction_5	160.793780974265	3236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	False	NA	NA	False	NA	NA	NA	120472427	120468930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
tx.4072	chr11	-	832	5	ISM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	646	2387	512	1	3prime_fragment	FALSE	canonical	3	3877	junction_4	220.512329587259	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCTGTCTGGTCCATCC	4952	False	NA	NA	False	NA	NA	NA	120488545	120485333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460
tx.4073	chr11	-	1272	7	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	1916.82799321054	33	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	4286	False	NA	NA	False	NA	NA	NA	120489211	120485334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_120485694_120485805_120485981_120486080_120486145_120486433_120486547_120486745_120486894_120488460_120488593_120488930
tx.4074	chr11	-	1473	6	NIC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-20	2	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	1629.06567086781	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGTCTGGTCCATCCT	4286	False	NA	NA	False	NA	NA	NA	120489211	120485332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_120485694_120485805_120485981_120486080_120486145_120486433_120486894_120488460_120488593_120488930
tx.4075	chr11	-	1162	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-23	2388	-23	0	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	2308	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	4283	False	NA	NA	False	NA	NA	NA	120489214	120485334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
tx.4076	chr11	+	746	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	55	2428	36	-6	multi-exon	FALSE	canonical	3	903	junction_1	470.5	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGGCCAAAACCTTC	3955	False	NA	NA	False	NA	NA	NA	120489301	120496596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120489431_120490067_120490195_120496106
tx.4077	chr11	+	838	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	118	6	118	-6	multi-exon	FALSE	canonical	3	1006	junction_1	419	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGGCCAAAACCTTC	4129	False	NA	NA	False	NA	NA	NA	120489475	120496596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120489697_120490067_120490195_120496106
tx.4078	chr11	-	7555	3	FSM	ENSMUSG00000051510.14_ENSMUSG00000025138.15	ENSMUST00000106182.8	1104	3	-2561	-3890	198	0	multi-exon	FALSE	canonical	3	29	junction_2	164.5	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7600	False	NA	NA	False	NA	NA	NA	120524184	120515942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120520563_120520643_120520708_120521313
tx.4079	chr11	-	4897	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	25	1	-19	-1	multi-exon	FALSE	canonical	3	302	junction_2	28	546	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGGTATTTCTTTGA	7383	False	NA	NA	False	NA	NA	NA	120524401	120515943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120520563_120520643_120520708_120524187
tx.408	chr1	+	2647	16	ISM	ENSMUSG00000026175.13	ENSMUST00000027366.13	3124	20	10210	41	533	-41	3prime_fragment	FALSE	canonical	0	0	junction_5	2.74388208363422	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGCTTTAATGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	74458744	74474677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_74458837_74458953_74459065_74460411_74460615_74460719_74460799_74460937_74461037_74462085_74462240_74462833_74462935_74463021_74463160_74464695_74464855_74465710_74465891_74466398_74466545_74466637_74466783_74467225_74467415_74469775_74469845_74471449_74471591_74474036
tx.4080	chr11	-	1897	9	NIC	ENSMUSG00000025140.16	novel	2914	8	NA	NA	-3	-706	combination_of_known_junctions	FALSE	canonical	2	46	junction_1	319.603269695415	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTTCTGTGGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	120534577	120527243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
tx.4081	chr11	-	1862	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	1	-2	1	2	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	819	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	NA	False	NA	NA	NA	120534573	120530239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
tx.4082	chr11	-	1743	7	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	364.341148132107	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	NA	False	NA	NA	NA	120534583	120530239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120534505
tx.4083	chr11	-	2085	12	NIC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_11	19.2637200221273	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9168	False	NA	NA	False	NA	NA	NA	120552060	120544613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551946
tx.4084	chr11	-	2372	11	FSM	ENSMUSG00000042988.11	ENSMUST00000106177.8	2212	11	-160	0	63	0	multi-exon	FALSE	canonical	3	96	junction_10	9.96042167782067	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9636	False	NA	NA	False	NA	NA	NA	120551592	120544613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820
tx.4085	chr11	-	4661	7	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-82	-4	intron_retention	FALSE	canonical	3	97	junction_6	7.83156008298049	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCCAGAAGCTCACCCT	9714	False	NA	NA	False	NA	NA	NA	120551514	120544617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120548422_120548711_120549218_120549475_120549572_120549650
tx.4086	chr11	+	1795	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	25	0	-9	0	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	628	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	120563842	120600273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
tx.4087	chr11	+	2077	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	243.577411833601	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	120564191	120600273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
tx.4088	chr11	+	2315	15	ISM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	374	0	7	0	3prime_fragment	FALSE	canonical	3	887	junction_2	62.0699079215344	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	120564191	120600273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
tx.4089	chr11	+	1889	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	238.262376383683	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	120564192	120600273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
tx.4090	chr11	-	568	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_3	359.512942125253	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	120604578	120601767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_120602133_120602215_120602305_120602528_120602583_120604518
tx.4091	chr11	-	605	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	1	0	1	0	multi-exon	FALSE	canonical	3	556	junction_4	137.848422189012	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	120604563	120601767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
tx.4092	chr11	+	2467	18	FSM	ENSMUSG00000025145.14	ENSMUST00000026139.14	2492	18	23	2	-3	-2	multi-exon	FALSE	canonical	3	36	junction_12	7.88805763716247	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCGTCCAGTTCCTTT	6087	False	NA	NA	False	NA	NA	NA	120604773	120611952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
tx.4093	chr11	+	1088	6	FSM	ENSMUSG00000018012.12	ENSMUST00000018156.12	1076	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	29	junction_1	12.4739729036101	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	3786	False	NA	NA	False	NA	NA	NA	120612283	120614795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120612468_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
tx.4094	chr11	-	872	7	FSM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	-44	2	-6	-2	multi-exon	FALSE	canonical	3	29	junction_2	29.9035486560077	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACAGATCTGTGCTATC	9978	False	NA	NA	False	NA	NA	NA	120618113	120616226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
tx.4095	chr11	-	887	8	FSM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	0	5	0	-5	multi-exon	FALSE	canonical	3	81	junction_3	11.7438650940369	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGCACAGATCTGTGCT	9984	False	NA	NA	False	NA	NA	NA	120618107	120616229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
tx.4096	chr11	+	1593	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	0	0	multi-exon	FALSE	canonical	3	1960	junction_1	0	1127	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTACAAGAGTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	120653619	120655245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr11_+_120653817_120653849
tx.4097	chr11	-	2377	7	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-20	1	intron_retention	TRUE	canonical	0	0	junction_1	65.2090654910973	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	NA	False	NA	NA	False	NA	NA	NA	120675053	120671570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
tx.4098	chr11	-	2009	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9868405862266	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	NA	False	NA	NA	False	NA	NA	NA	120675054	120671570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
tx.4099	chr11	-	2138	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	-17	-3	-17	1	multi-exon	FALSE	canonical	3	122	junction_3	23.1137382947714	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	NA	False	NA	NA	False	NA	NA	NA	120675050	120671570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
tx.410	chr1	-	7132	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	-20	-1	-17	1	multi-exon	TRUE	canonical	3	36	junction_8	42.9588980155981	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	74544982	74474668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
tx.4100	chr11	+	1857	14	FSM	ENSMUSG00000025156.18	ENSMUST00000116305.8	1827	14	-30	0	0	0	multi-exon	TRUE	canonical	3	682	junction_1	155.049677093711	590	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1394	False	NA	NA	False	NA	NA	NA	120675100	120679928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
tx.4101	chr11	+	2140	13	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	-68	1	-68	0	intron_retention	FALSE	canonical	3	238	junction_1	261.317003635219	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1566	False	NA	NA	False	NA	NA	NA	120675272	120679927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
tx.4102	chr11	+	2071	14	FSM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	-71	0	-71	0	multi-exon	FALSE	canonical	3	238	junction_1	255.452956564905	280	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1563	False	NA	NA	False	NA	NA	NA	120675269	120679928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
tx.4103	chr11	-	2115	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	259.578401924278	467	1	1	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	NA	False	NA	NA	NA	120687221	120680026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
tx.4104	chr11	-	1837	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	245.913368110366	512	1	1	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	NA	False	NA	NA	NA	120687223	120680026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
tx.4105	chr11	-	8382	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	438	1230	-14	29	multi-exon	TRUE	canonical	3	375	junction_39	98.8392726301593	457	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	120714935	120697901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
tx.4106	chr11	-	3430	19	FSM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	-30	3	-30	-3	multi-exon	FALSE	canonical	2	6	junction_6	6.51399253648882	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTCTGTCTTGTCCT	1441	False	NA	NA	False	NA	NA	NA	120823728	120717357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120717751_120751226_120751453_120751963_120752096_120757380_120757503_120764411_120764626_120769703_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
tx.4107	chr11	+	2131	5	FSM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	30	225	16	0	multi-exon	FALSE	canonical	3	33	junction_1	128.437484793186	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	NA	False	NA	NA	NA	120839922	120849601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120839977_120846051_120846296_120846624_120846769_120847180_120847949_120848680
tx.4108	chr11	+	2238	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	4	2093	4	0	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	494	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	NA	False	NA	NA	NA	120839910	120849601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
tx.4109	chr11	-	3732	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	-232	0	6	0	multi-exon	TRUE	canonical	3	176	junction_1	174.428237039028	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	782	False	NA	NA	False	NA	NA	NA	120882150	120852574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
tx.411	chr1	-	7202	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	74544986	74474668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
tx.4110	chr11	-	3669	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	6	0	6	0	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	706	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	782	False	NA	NA	False	NA	NA	NA	120882150	120852574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
tx.4111	chr11	-	3588	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_5	196.81272824693	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	786	False	NA	NA	False	NA	NA	NA	120882146	120852574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
tx.4112	chr11	-	1683	3	FSM	ENSMUSG00000039337.4	ENSMUST00000039146.4	2046	3	363	0	363	0	multi-exon	FALSE	canonical	3	61	junction_1	13.5	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTGCAGTCTCCTCAT	NA	False	NA	NA	False	NA	NA	NA	121009140	121007040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_121008523_121008652_121008727_121009013
tx.4113	chr11	+	1734	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	11	0	-3	0	multi-exon	FALSE	canonical	3	732	junction_1	1	657	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	121036979	121039145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_121037049_121037353_121037428_121037554
tx.4114	chr11	-	1297	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	4	7	4	-7	multi-exon	FALSE	canonical	3	143	junction_7	19.9483708607996	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAAGTGTGTGATCTGG	NA	False	NA	NA	False	NA	NA	NA	121095533	121068423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
tx.4115	chr11	+	2140	13	FSM	ENSMUSG00000039307.17	ENSMUST00000106117.8	2149	13	17	-8	17	0	multi-exon	FALSE	canonical	3	14	junction_2	4.64503916979059	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAAACTCTAATCAGCT	NA	False	NA	NA	False	NA	NA	NA	121095277	121113481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
tx.4116	chr11	-	2368	7	NIC	ENSMUSG00000039294.15	novel	2417	7	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	17.7709188157381	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	121120106	121113413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119884
tx.4117	chr11	-	2394	7	FSM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	23	0	19	0	multi-exon	FALSE	canonical	0	0	junction_6	26.4790273403101	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	121120112	121113413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119864
tx.4118	chr11	+	3122	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	-19	1292	-19	-1292	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGCATTGAAGGAGTCA	NA	False	NA	NA	False	NA	NA	NA	121128059	121145390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
tx.4119	chr11	+	5019	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	10	0	10	0	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	281	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4672	False	NA	NA	False	NA	NA	NA	121150825	121200722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
tx.412	chr1	-	7241	26	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	59.3845232362777	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGTTTGATTTATT	NA	False	NA	NA	False	NA	NA	NA	74544995	74474671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535129_74539114_74539260_74544818
tx.4120	chr11	+	5026	9	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	71.1634342552409	97	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4662	False	NA	NA	False	NA	NA	NA	121150815	121200722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197596
tx.4121	chr11	+	4809	8	NIC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	88.9058203829152	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4672	False	NA	NA	False	NA	NA	NA	121150825	121200722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121197593
tx.4122	chr11	+	4824	8	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	92.6474555528006	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATACAGAGTATCATT	4652	False	NA	NA	False	NA	NA	NA	121150805	121200720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121197596
tx.4123	chr11	+	5149	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	108.060796788054	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATACAGAGTATCATT	4657	False	NA	NA	False	NA	NA	NA	121150810	121200720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_121151349_121157681_121157799_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
tx.4124	chr11	-	2229	10	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	138.714023252567	89	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAAAGAGCAGAGCCAT	NA	False	NA	NA	False	NA	NA	NA	121245221	121218057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221025_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
tx.4125	chr11	-	2263	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	49	9	-3	-9	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	613	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGTAAAGAGCAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	121245222	121218058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
tx.4126	chr11	+	2508	6	FSM	ENSMUSG00000039253.8	ENSMUST00000038096.8	2520	6	12	0	12	0	multi-exon	TRUE	canonical	3	26	junction_4	7.30479294709987	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAAGACTGGTATATTT	3869	False	NA	NA	False	NA	NA	NA	121312238	121322114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_121312430_121315751_121315904_121316380_121316473_121317446_121317530_121319870_121319994_121320247
tx.4127	chr11	+	3885	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	54.3336283547972	568	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	NA	False	NA	NA	NA	121342790	121507990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469620_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
tx.4128	chr11	-	2838	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	15	11	15	-11	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGCACAATCTTGACTA	NA	False	NA	NA	False	NA	NA	NA	121563964	121507033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
tx.4129	chr11	+	3236	4	FSM	ENSMUSG00000039198.9	ENSMUST00000036690.7	3194	4	-36	-6	-36	6	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAAAGTGTTATGTTT	2448	False	NA	NA	False	NA	NA	NA	121721036	121734255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr11_+_121722086_121722870_121722993_121727206_121727353_121732336
tx.413	chr1	-	7471	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-303	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_24	45.4335404434017	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	74545745	74474668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74545308
tx.4130	chr11	-	2961	4	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	81.0198878191165	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTGTCTTGCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	121816178	121795184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_121797835_121798775_121798837_121799014_121799142_121816055
tx.4131	chr11	-	2775	4	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	200	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGTCTTGCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	121816169	121795183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
tx.4132	chr11	-	3892	3	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	175	junction_1	12.5	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTGTCTTGCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	121816168	121795184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr11_-_121798837_121799014_121799142_121816055
tx.4133	chr12	+	5199	3	ISM	ENSMUSG00000079179.10	ENSMUST00000177896.8	2872	7	-7	9114	-7	-147	intron_retention	FALSE	canonical	3	138	junction_2	36.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAATAAAAAGAGTTAATC	NA	False	NA	NA	False	NA	NA	NA	3285518	3291263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_3287413_3287590_3287661_3288028
tx.4134	chr12	+	4014	5	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-413	7807	-2	727	intron_retention	FALSE	canonical	3	40	junction_4	60.7345659406569	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCGCCGGGCGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	3285501	3292137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833
tx.4135	chr12	+	3879	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	7	120	7	-120	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAGTGTTAATTTTAGT	NA	False	NA	NA	False	NA	NA	NA	3285510	3291290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
tx.4136	chr12	+	3967	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	-18	-3137	4	0	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAAGCTCTTACTTGAT	NA	False	NA	NA	False	NA	NA	NA	3285507	3291410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
tx.4137	chr12	-	3498	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	13	2	13	-2	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	1896	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGGTTTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	3359956	3297429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
tx.4138	chr12	+	4394	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	-31	2428	27	2	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTGACCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	3415158	3454066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
tx.4139	chr12	+	4116	9	FSM	ENSMUSG00000020668.11	ENSMUST00000220210.2	4144	9	28	0	28	0	multi-exon	FALSE	canonical	3	5	junction_1	19.8679232684244	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGACCTTTATT	NA	False	NA	NA	False	NA	NA	NA	3415159	3454064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_3415497_3415771_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
tx.414	chr1	+	3003	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	263	2	261	-2	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	383	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTTTTGTTTTTAA	1123	False	NA	NA	False	NA	NA	NA	74545479	74569999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
tx.4140	chr12	-	3175	3	FSM	ENSMUSG00000112308.2_ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	-5	-1247	2	-185	multi-exon	FALSE	canonical	3	62	junction_1	5.5	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTAAAATAGAAATTTA	NA	False	NA	NA	False	NA	NA	NA	3476745	3454062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_3456712_3457643_3457925_3476500
tx.4141	chr12	-	3128	3	FSM	ENSMUSG00000071456.7	ENSMUST00000168012.3	3569	3	266	175	2	-175	multi-exon	FALSE	canonical	3	14	junction_1	29.5	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTACTTATCACTT	NA	False	NA	NA	False	NA	NA	NA	3476745	3454052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_3456712_3457700_3457925_3476500
tx.4142	chr12	-	2272	2	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGAATGTGGCTTTGA	NA	False	NA	NA	False	NA	NA	NA	3608080	3601818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_-_3603951_3607940
tx.4143	chr12	+	2391	20	FSM	ENSMUSG00000071454.14	ENSMUST00000164607.9	2390	20	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_4	90.3998198218487	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	NA	False	NA	NA	NA	3622431	3831398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
tx.4144	chr12	+	2352	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	255	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	NA	False	NA	NA	NA	3622429	3831398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
tx.4145	chr12	+	1288	7	FSM	ENSMUSG00000071454.14	ENSMUST00000174479.8	3689	7	18	2383	-1	-2383	multi-exon	FALSE	canonical	0	0	junction_4	135.946067737663	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGCCTCTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	3622451	3694404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916
tx.4146	chr12	+	5600	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-51	4136	-51	1760	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTAAAATGGG	575	False	NA	NA	False	NA	NA	NA	3856978	3960307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
tx.4147	chr12	+	8916	18	ISM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	66277	2	7116	-2	3prime_fragment	FALSE	canonical	3	68	junction_1	18.9014929565407	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTTTTGTATTTTTTT	9902	False	NA	NA	False	NA	NA	NA	3923306	3964441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
tx.4148	chr12	+	3445	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	54	-1171	38	466	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTTTGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	3941781	3959013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
tx.4149	chr12	+	4551	16	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	4171	-2481	306	1776	3prime_fragment	FALSE	canonical	3	107	junction_5	13.1426362990417	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACAGTGAACCTCACTT	NA	False	NA	NA	False	NA	NA	NA	3945898	3960323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
tx.415	chr1	-	5862	8	NIC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	-1	-19	intron_retention	FALSE	canonical	2	5	junction_6	16.630436812406	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTTGTTTGGATCCCTG	NA	False	NA	NA	False	NA	NA	NA	74627188	74605603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74624542_74624857_74626722
tx.4150	chr12	-	6566	23	FSM	ENSMUSG00000020658.11	ENSMUST00000111178.2	6547	23	-21	2	-21	-1	multi-exon	FALSE	canonical	1	2	junction_15	2.26224857056896	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGTCTATTTGAATT	NA	False	NA	NA	False	NA	NA	NA	4088936	4012555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_4016548_4017102_4017153_4018526_4018634_4019564_4019614_4020975_4021068_4021765_4021894_4023607_4023676_4025335_4025468_4026714_4026877_4027118_4027195_4027912_4028086_4030141_4030194_4030450_4030563_4031653_4031816_4031969_4032106_4032854_4032934_4033383_4033519_4034533_4034684_4035429_4035552_4042905_4043057_4049589_4049718_4050879_4050957_4088703
tx.4151	chr12	+	4679	7	FSM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	19	0	19	0	multi-exon	FALSE	canonical	3	25	junction_5	5.84284938098603	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTCTGCTGGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	4132601	4160606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801
tx.4152	chr12	+	4399	9	FSM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	-63	-1402	-17	0	multi-exon	FALSE	canonical	2	4	junction_7	12.4492720670728	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTCTGCTGGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	4132565	4160606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801_4157044_4157158_4157349_4157549
tx.4153	chr12	+	5027	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	15.3109863775942	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	NA	False	NA	NA	NA	4183100	4263525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
tx.4154	chr12	+	5025	22	FSM	ENSMUSG00000020654.16	ENSMUST00000152065.8	4728	22	-297	0	-3	0	multi-exon	FALSE	canonical	3	14	junction_1	15.9929122623238	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	NA	False	NA	NA	NA	4183099	4263525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
tx.4155	chr12	+	4951	22	NIC	ENSMUSG00000020654.16	novel	4962	22	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.8737696951146	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	NA	False	NA	NA	NA	4183117	4263525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
tx.4156	chr12	+	5006	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	15.5787808476277	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	NA	False	NA	NA	NA	4183124	4263525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_4183779_4184146_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
tx.4157	chr12	+	4956	22	FSM	ENSMUSG00000020654.16	ENSMUST00000124505.8	4962	22	6	0	6	0	multi-exon	FALSE	canonical	3	17	junction_1	15.5787808476277	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	NA	False	NA	NA	NA	4183109	4263525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
tx.4158	chr12	-	2207	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	329	1812	0	3	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGATTCTTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	4283965	4263478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
tx.4159	chr12	-	2454	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	51	2	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	14.9666295470958	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCAGATTCTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	4284243	4263479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
tx.416	chr1	-	3278	3	ISM	ENSMUSG00000026135.18	ENSMUST00000127921.2	5020	8	13720	-428	13720	-15	3prime_fragment	FALSE	canonical	3	42	junction_2	6.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGGATCCCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	74611102	74605599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_74606507_74607709_74607816_74608837
tx.4160	chr12	-	2520	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	55	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	27.9026084005699	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCAGATTCTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	4284239	4263479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281445_4281683_4283530_4283658_4283781
tx.4161	chr12	-	2277	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	28.5623100528573	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGATTCTTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	4283965	4263478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281445_4281683_4283530_4283658_4283751
tx.4162	chr12	+	3822	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	18	0	18	0	multi-exon	FALSE	canonical	3	212	junction_1	0	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCATTACCTAAAATAGAT	NA	False	NA	NA	False	NA	NA	NA	4284044	4289950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4284279_4286362
tx.4163	chr12	+	3892	2	NNC	ENSMUSG00000096199.3	novel	3840	2	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCATTACCTAAAATAGAT	NA	False	NA	NA	False	NA	NA	NA	4284393	4289950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_4284698_4286362
tx.4164	chr12	-	7209	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-30	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	26.2996857279275	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGCTGCCTCTTCATTTA	NA	False	NA	NA	False	NA	NA	NA	4527212	4297362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4466670_4466806_4526771
tx.4165	chr12	-	7269	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.557951268816	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGCTGCCTCTTCATTTA	NA	False	NA	NA	False	NA	NA	NA	4527178	4297362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
tx.4166	chr12	-	5288	23	FSM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	-21	2062	-21	17	multi-exon	FALSE	canonical	3	76	junction_22	13.9950552070342	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527203	4299423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
tx.4167	chr12	+	5923	39	NIC	ENSMUSG00000020640.11	novel	4977	38	NA	NA	135	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_1	16.9216255939665	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCAAAGCTTGACTCT	7151	False	NA	NA	False	NA	NA	NA	4642772	4763952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_4642932_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
tx.4168	chr12	+	5978	39	FSM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	11	-2	11	0	multi-exon	FALSE	canonical	3	57	junction_33	12.8594576467878	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCAAAGCTTGACTCT	7397	False	NA	NA	False	NA	NA	NA	4643018	4763952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
tx.4169	chr12	+	6999	29	NIC	ENSMUSG00000020640.11	novel	5987	39	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_28	17.6486037489008	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTATTGTGTATTTC	7397	False	NA	NA	False	NA	NA	NA	4643018	4729503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
tx.417	chr1	-	6560	9	FSM	ENSMUSG00000026135.18	ENSMUST00000027315.14	6480	9	-103	23	5	-23	multi-exon	FALSE	canonical	3	25	junction_7	11.659223816361	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGACTTGTTTGGATC	NA	False	NA	NA	False	NA	NA	NA	74627287	74605607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722
tx.4171	chr12	-	5832	8	NIC	ENSMUSG00000050545.11	novel	2851	7	NA	NA	85	0	intron_retention	FALSE	canonical	3	6	junction_1	5.96930926165034	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTCTGTGATGATT	NA	False	NA	NA	False	NA	NA	NA	4819147	4789887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_4791208_4794469_4798178_4798263_4798352_4812326_4812408_4812999_4813192_4814078_4814148_4818389_4818522_4818905
tx.4172	chr12	+	2129	4	FSM	ENSMUSG00000020639.15	ENSMUST00000020967.11	1306	4	-284	-539	-11	-3	multi-exon	FALSE	canonical	1	2	junction_2	0.816496580927726	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGCATGTGTGAAGTCT	1344	False	NA	NA	False	NA	NA	NA	4819010	4828805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4820270_4824391_4824530_4825419_4825526_4828179
tx.4173	chr12	+	772	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	7	401	7	-8	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTGTCTTCTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	4867550	4877258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
tx.4174	chr12	-	941	4	FSM	ENSMUSG00000020635.9	ENSMUST00000020964.7	976	4	32	3	32	-3	multi-exon	FALSE	canonical	3	44	junction_1	6.34209919681348	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTGTTGTGGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	4891559	4883176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_4883796_4884738_4884852_4888168_4888217_4891398
tx.4175	chr12	+	2186	4	FSM	ENSMUSG00000051721.7	ENSMUST00000220215.2	2202	4	23	-7	-2	7	multi-exon	FALSE	canonical	2	4	junction_3	5.90668171555645	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTATTCATTTATTATG	NA	False	NA	NA	False	NA	NA	NA	4893325	4906974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4906845
tx.4176	chr12	+	2444	3	NNC	ENSMUSG00000051721.7	novel	1950	3	NA	NA	6	376	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	36.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTTGGTGTGAAGATTA	NA	False	NA	NA	False	NA	NA	NA	4893352	4902143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_4893452_4898862_4899191_4900126
tx.4177	chr12	+	585	2	FSM	ENSMUSG00000051721.7	ENSMUST00000219069.2	605	2	24	-4	5	4	multi-exon	FALSE	canonical	3	75	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGTGTGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	4893351	4899347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_4893452_4898862
tx.4178	chr12	+	3225	3	ISM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	6989	778	146	-778	3prime_fragment	FALSE	canonical	3	7	junction_2	5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTATTTTTAAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	4900291	4909265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_4901943_4905277_4905393_4907806
tx.4179	chr12	-	3575	2	NNC	ENSMUSG00000020634.13	novel	965	6	NA	NA	26753	2221	at_least_one_novel_splicesite	TRUE	canonical	3	227	junction_1	0	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTAAGACGTGGCTTACT	NA	False	NA	NA	False	NA	NA	NA	4930511	4926810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_4927640_4927765
tx.418	chr1	-	6450	7	ISM	ENSMUSG00000026135.18	ENSMUST00000127921.2	5020	8	4971	-424	4971	-19	3prime_fragment	FALSE	canonical	3	27	junction_6	9.95685135416256	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTTGTTTGGATCCCTG	NA	False	NA	NA	False	NA	NA	NA	74619851	74605603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483
tx.4180	chr12	-	4580	6	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-93	2216	combination_of_known_splicesites	FALSE	canonical	3	98	junction_1	450.324061093786	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTCAGTAAGACGTGGC	NA	False	NA	NA	False	NA	NA	NA	4957532	4926815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_4930772_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
tx.4181	chr12	-	4382	7	FSM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	-5	-2231	-5	1914	multi-exon	FALSE	canonical	3	49	junction_6	462.20356866741	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGGATCTGTTTAGTGA	NA	False	NA	NA	False	NA	NA	NA	4957269	4927117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957140
tx.4182	chr12	-	4433	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	182	-1919	-84	1919	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	714	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGTTTAGTGATTCAC	NA	False	NA	NA	False	NA	NA	NA	4957523	4927112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
tx.4183	chr12	-	4322	6	FSM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-80	-3277	-80	1919	multi-exon	FALSE	canonical	3	58	junction_3	515.309770914544	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGTTTAGTGATTCAC	NA	False	NA	NA	False	NA	NA	NA	4957519	4927112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
tx.4184	chr12	-	2537	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	188	3022	-78	-1664	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAAGAAAATATTCTTGA	NA	False	NA	NA	False	NA	NA	NA	4957517	4932053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
tx.4185	chr12	+	8013	28	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_21	27.6289345558485	50	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCATGATT	NA	False	NA	NA	False	NA	NA	NA	4967403	5097396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
tx.4186	chr12	+	4068	21	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-13	736	combination_of_known_junctions	FALSE	canonical	3	129	junction_14	17.6790129814987	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTCCTGATTGTGAA	NA	False	NA	NA	False	NA	NA	NA	4967390	5064779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802
tx.4187	chr12	+	8028	28	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	118	junction_21	18.2748412215681	156	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCATGATT	NA	False	NA	NA	False	NA	NA	NA	4967403	5097396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
tx.4188	chr12	+	2715	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_5	23.7533623350932	287	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	NA	False	NA	NA	NA	8258140	8335759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
tx.4189	chr12	+	2994	7	NNC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	51.6881675692481	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAATTTCAGTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	8363435	8393817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_8363498_8367784_8367997_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
tx.419	chr1	+	1618	8	FSM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	18	254	18	0	multi-exon	FALSE	canonical	3	21	junction_1	42.4562199476696	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTACCTACAAGATCTA	1160	False	NA	NA	False	NA	NA	NA	74627476	74631348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74627647_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
tx.4190	chr12	+	2952	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	4	3	4	-3	multi-exon	FALSE	canonical	3	118	junction_1	12.8765506078125	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCAGTGTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	8363435	8393821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
tx.4191	chr12	+	6074	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111123.9	4984	21	11	-1101	0	-2	multi-exon	TRUE	canonical	2	7	junction_1	41.9630790100059	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATATCCCTCTATATC	NA	False	NA	NA	False	NA	NA	NA	8724144	8802555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_8724171_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
tx.4192	chr12	+	6082	21	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.9223426667278	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAATATCCCTCTATAT	NA	False	NA	NA	False	NA	NA	NA	8724229	8802554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_8724265_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
tx.4193	chr12	+	6171	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	132	8	-65	-4	multi-exon	FALSE	canonical	3	78	junction_1	34.6128227684481	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAATATCCCTCTATA	NA	False	NA	NA	False	NA	NA	NA	8724355	8802553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
tx.4194	chr12	+	5932	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-115	-2522	-66	-7	multi-exon	FALSE	canonical	3	62	junction_12	35.415538790362	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGATAAAATATCCCTCT	NA	False	NA	NA	False	NA	NA	NA	8724354	8802550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
tx.4195	chr12	+	4213	9	ISM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	59145	7	4222	-3	3prime_fragment	FALSE	canonical	3	80	junction_1	35.0657863878739	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAATATCCCTCTATAT	8797	False	NA	NA	False	NA	NA	NA	8783368	8802554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
tx.4196	chr12	+	2521	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	-5	641	-5	12	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	451	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTACTGCTTCTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	8821317	8843074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
tx.4197	chr12	+	1390	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	379	4	379	-4	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	610	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTGCCTCATGTTTAT	NA	False	NA	NA	False	NA	NA	NA	8972042	8988738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
tx.4198	chr12	+	4335	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	-22	-1	14	0	multi-exon	FALSE	canonical	3	49	junction_5	11.1856972283898	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTAATGCTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	9024024	9078847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
tx.4199	chr12	+	786	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	3	211	3	-211	multi-exon	FALSE	canonical	3	121	junction_2	13	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTATTCCCAACTTTG	NA	False	NA	NA	False	NA	NA	NA	9079999	9086183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_9080197_9084921_9085089_9085761
tx.420	chr1	+	1528	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	28	-68	17	3	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACCTACAAGATCTACAT	1159	False	NA	NA	False	NA	NA	NA	74627475	74631351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
tx.4200	chr12	+	1471	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	8	1	8	-1	multi-exon	FALSE	canonical	3	67	junction_1	0	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGCATTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	10440779	10445561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_10441227_10444537
tx.4201	chr12	-	2347	3	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	720	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	27	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTTGTTTCTATGTT	4727	False	NA	NA	False	NA	NA	NA	11199654	11140739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_11142757_11169759_11169950_11199514
tx.4202	chr12	-	2389	3	FSM	ENSMUSG00000043673.12	ENSMUST00000055673.2	2933	3	7	537	7	1	multi-exon	FALSE	canonical	3	56	junction_1	7	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTTGTTTCTATGTT	4014	False	NA	NA	False	NA	NA	NA	11200367	11140739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_11142757_11169759_11169950_11200185
tx.4203	chr12	-	3298	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-41	2011	-6	639	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTTGAAATGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	11315808	11290931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
tx.4204	chr12	-	2069	12	ISM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-46	6813	-11	2008	5prime_fragment	FALSE	canonical	3	39	junction_9	5.8124972229621	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGTATTCAGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	11315813	11295733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
tx.4205	chr12	+	3736	26	FSM	ENSMUSG00000020608.8	ENSMUST00000218022.2	5272	26	4	1532	4	204	multi-exon	TRUE	canonical	3	71	junction_3	127.798754297528	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4540	False	NA	NA	False	NA	NA	NA	11316109	11368248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
tx.4206	chr12	+	3842	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	223	1538	4	204	multi-exon	FALSE	canonical	3	574	junction_19	50.8148542090207	1161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4540	False	NA	NA	False	NA	NA	NA	11316109	11368248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
tx.4207	chr12	+	2121	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	-20	1272	4	-1272	multi-exon	FALSE	canonical	3	624	junction_2	43.5943704599856	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCTGTTTAATTTTT	4540	False	NA	NA	False	NA	NA	NA	11316109	11336383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
tx.4208	chr12	+	3617	25	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	5	204	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4541	False	NA	NA	False	NA	NA	NA	11316110	11368248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
tx.4209	chr12	+	4764	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	-25	-2968	13	2968	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGTATATGATGCA	NA	False	NA	NA	False	NA	NA	NA	12312152	12426364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
tx.421	chr1	+	2543	7	NIC	ENSMUSG00000026172.13	novel	1679	8	NA	NA	17	0	intron_retention	FALSE	canonical	3	106	junction_1	16.0381489649592	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTACCTACAAGATCTA	1233	False	NA	NA	False	NA	NA	NA	74627549	74631348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
tx.4210	chr12	+	4833	13	FSM	ENSMUSG00000020589.18	ENSMUST00000069066.14	9452	13	13	4606	13	2964	multi-exon	FALSE	canonical	3	12	junction_2	32.1829621936135	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATGTTTGTATATGA	NA	False	NA	NA	False	NA	NA	NA	12312152	12426360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_12312240_12326343_12326417_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
tx.4211	chr12	-	2594	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	76	4	-13	-1	multi-exon	FALSE	canonical	3	794	junction_2	66.5	1644	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCGATGTTTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	12991839	12986097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_12987612_12989610_12990488_12991636
tx.4212	chr12	-	2484	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	30	2328	-20	-2328	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	2481	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGCTTGTGTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	13299184	13269301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
tx.4213	chr12	+	7241	52	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-11	1	at_least_one_novel_splicesite	TRUE	canonical	3	26	junction_19	10.6193442780164	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGATGCCCTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	13319122	13633805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491859_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
tx.4214	chr12	+	7237	52	FSM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	-8	5	-8	3	multi-exon	FALSE	canonical	3	21	junction_37	10.8075685101282	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATGCCCTTTGAGTACT	NA	False	NA	NA	False	NA	NA	NA	13319125	13633807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
tx.4215	chr12	-	3417	2	FSM	ENSMUSG00000020607.8	ENSMUST00000020926.8	4164	2	-15	762	-15	-762	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGGACTCCTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	14202070	14197592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_14200762_14201822
tx.4216	chr12	-	5435	22	NIC	ENSMUSG00000020593.17	novel	5511	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_21	35.2563659197666	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7247	False	NA	NA	False	NA	NA	NA	16639766	16585954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
tx.4217	chr12	-	5292	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	4	285	0	0	multi-exon	FALSE	canonical	3	67	junction_16	22.2780160696593	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7246	False	NA	NA	False	NA	NA	NA	16639767	16585954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
tx.4218	chr12	-	5336	21	FSM	ENSMUSG00000020593.17	ENSMUST00000222989.2	4103	21	1	-1234	1	0	multi-exon	FALSE	canonical	3	30	junction_20	37.3187620373452	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7247	False	NA	NA	False	NA	NA	NA	16639766	16585954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
tx.4219	chr12	-	5192	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	8	-1086	1	0	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7247	False	NA	NA	False	NA	NA	NA	16639766	16585954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
tx.422	chr1	-	1458	10	FSM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	-6	-1	-6	1	multi-exon	FALSE	canonical	3	22	junction_3	27.6463557752974	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	NA	NA	NA	74640542	74632910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
tx.4220	chr12	+	2507	8	FSM	ENSMUSG00000057469.9	ENSMUST00000221541.2	2362	8	-145	0	-9	0	multi-exon	FALSE	canonical	2	121	junction_1	60.8859757318245	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7387	False	NA	NA	False	NA	NA	NA	16860954	16876753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
tx.4221	chr12	+	2441	7	FSM	ENSMUSG00000057469.9	ENSMUST00000020908.9	2418	7	-24	1	-10	-1	multi-exon	FALSE	canonical	2	127	junction_1	56.1505911713215	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGCGTGCCTGTGTTT	7386	False	NA	NA	False	NA	NA	NA	16860953	16876752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
tx.4222	chr12	+	2295	6	NIC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	95.7747357083276	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7385	False	NA	NA	False	NA	NA	NA	16860952	16876753	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16875365
tx.4223	chr12	+	7645	32	NIC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-53	-40	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	39.1709877986204	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTTAAAAAAATAAATAAAA	1982	False	NA	NA	False	NA	NA	NA	16944842	17037784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004969_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
tx.4224	chr12	+	7659	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-54	-36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	221	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAGAAA	1981	False	NA	NA	False	NA	NA	NA	16944841	17037788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
tx.4225	chr12	+	2181	9	ISM	ENSMUSG00000020580.11	ENSMUST00000220688.2	4357	33	-330	24113	-58	7171	5prime_fragment	FALSE	canonical	3	133	junction_2	21.1468082698075	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTCTCAGTGTTTA	1977	False	NA	NA	False	NA	NA	NA	16944837	17003990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261
tx.4226	chr12	-	1868	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	57	3	6	-3	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTAAGCTGTCATGA	NA	False	NA	NA	False	NA	NA	NA	17050062	17038651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
tx.4227	chr12	+	1739	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	-9	395	-9	-395	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	2912	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTATGAAATTAGT	NA	False	NA	NA	False	NA	NA	NA	17316586	17334376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
tx.4228	chr12	-	1457	13	FSM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	-29	-3	-29	0	multi-exon	FALSE	canonical	3	13	junction_8	6.04841577054135	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTCTTGTGTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	17374760	17334722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
tx.4229	chr12	+	3025	21	FSM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	-4	0	-4	0	multi-exon	FALSE	canonical	3	221	junction_7	25.2103153490788	416	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTGTTTAGCTTA	NA	False	NA	NA	False	NA	NA	NA	17398454	17480096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
tx.423	chr1	-	1456	10	FSM	ENSMUSG00000026171.13	ENSMUST00000027357.12	1479	10	19	4	-1	1	multi-exon	FALSE	canonical	3	94	junction_3	8.63384096891663	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	NA	NA	NA	74640537	74632910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
tx.4230	chr12	+	2066	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	141	1	-37	-1	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	1573	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCAGGGAATGTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	17594935	17601084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
tx.4231	chr12	+	1572	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	-50	4	-50	-4	multi-exon	FALSE	canonical	3	71	junction_1	8.52447456836295	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	8574	False	NA	NA	False	NA	NA	NA	17740806	17841930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
tx.4232	chr12	+	1646	5	NIC	ENSMUSG00000071379.3	novel	1526	4	NA	NA	-38	-4	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	31.8541598539343	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	8586	False	NA	NA	False	NA	NA	NA	17740818	17841930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_17741048_17817214_17817301_17836147_17836550_17837545_17837652_17841107
tx.4233	chr12	+	5457	3	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	0.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACCCCTTGTCAACTTG	NA	False	NA	NA	False	NA	NA	NA	17904897	17916671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_17908695_17909653_17909973_17915330
tx.4234	chr12	+	2407	4	Fusion	ENSMUSG00000114025.2_ENSMUSG00000113294.2	novel	1214	3	NA	NA	-313	-507	intron_retention	FALSE	canonical	3	43	junction_1	46.5999523128035	132	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	NA	False	NA	NA	NA	17931884	17954169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_17932324_17950660_17950788_17950987_17951049_17952389
tx.4235	chr12	+	3430	3	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10201	-507	intron_retention	FALSE	canonical	3	46	junction_1	55.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	NA	False	NA	NA	NA	17942188	17954169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_17942310_17950660_17950788_17950987
tx.4236	chr12	+	2089	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10201	-507	intron_retention	FALSE	canonical	3	46	junction_1	45.4190366354119	84	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	NA	False	NA	NA	NA	17942188	17954169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17952389
tx.4237	chr12	+	2128	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10191	-507	intron_retention	FALSE	canonical	3	10	junction_1	60.256857608814	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	NA	False	NA	NA	NA	17942198	17954169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_17942310_17950611_17950788_17950987_17951049_17952389
tx.4238	chr12	+	2683	4	Genic_Genomic	ENSMUSG00000113402.2	novel	324	1	NA	NA	-262	18678	multi-exon	FALSE	canonical	3	19	junction_2	10.0332779621949	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	18437493	18456757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_18437954_18452998_18453126_18453327_18453389_18454722
tx.4239	chr12	+	2734	3	Genic_Genomic	ENSMUSG00000113402.2	novel	324	1	NA	NA	-262	18856	multi-exon	FALSE	canonical	1	1	junction_1	20.5	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATAGTCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	18437493	18456935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_18437954_18453327_18453389_18454722
tx.424	chr1	-	3917	8	ISM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	-8	-1	-8	1	intron_retention	FALSE	canonical	3	22	junction_3	28.8139705344332	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	NA	NA	NA	74640544	74632910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851
tx.4240	chr12	+	3853	5	Fusion	ENSMUSG00000116815.2_ENSMUSG00000073197.10	novel	2431	4	NA	NA	-66	1700	multi-exon	TRUE	non_canonical	0	0	junction_1	0.433012701892219	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	18564444	18701699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_18564865_18696480_18696608_18696807_18696869_18698202_18699090_18699341
tx.4241	chr12	+	1922	6	Fusion	ENSMUSG00000113646.2_ENSMUSG00000073197.10	novel	547	3	NA	NA	-66	740	multi-exon	TRUE	non_canonical	0	0	junction_1	3.2	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	18564444	18827116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_18564865_18713129_18713137_18802083_18802292_18823494_18823836_18825259_18825366_18826276
tx.4242	chr12	+	4112	4	Genic_Genomic	ENSMUSG00000116815.2_ENSMUSG00000113724.2	novel	1785	1	NA	NA	-300	1700	multi-exon	FALSE	canonical	0	0	junction_2	12.9700509722291	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	18660084	18701699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202
tx.4243	chr12	+	2880	4	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	34.2150064542836	66	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGTATTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	19116368	19127637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_19116514_19123371_19123499_19123700_19123762_19125090
tx.4244	chr12	+	4052	5	Fusion	ENSMUSG00000113959.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-51	753	multi-exon	FALSE	canonical	0	0	junction_1	10.6418983268964	29	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	19338511	19355945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_19338925_19339819_19339930_19350884_19351012_19351214_19351276_19352604
tx.4245	chr12	+	3174	4	Fusion	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-59	9908	multi-exon	FALSE	canonical	0	0	junction_1	12.9614813968157	37	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGGGTGGCTCCATGC	NA	False	NA	NA	False	NA	NA	NA	19338503	19361173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_19338925_19350884_19351012_19351214_19351276_19358608
tx.4246	chr12	+	3947	4	Fusion	ENSMUSG00000113959.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-53	756	multi-exon	FALSE	canonical	0	0	junction_1	12.2474487139159	98	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTGGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	19338509	19355948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_19338925_19350884_19351012_19351214_19351276_19352604
tx.4247	chr12	+	1424	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-62	8030	multi-exon	FALSE	canonical	0	0	junction_1	10.9857862713599	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTATTTTATTATTTC	NA	False	NA	NA	False	NA	NA	NA	19338500	19359295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_19338925_19350884_19351012_19351214_19351276_19357966_19358092_19358608
tx.4248	chr12	+	4158	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	-22	19404	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	5.55777733351102	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	19437787	19459691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_19438215_19454315_19454443_19454644_19454706_19456148
tx.4249	chr12	+	4253	4	Genic_Genomic	ENSMUSG00000059229.8	novel	1983	1	NA	NA	-53	10659	multi-exon	FALSE	canonical	3	13	junction_2	22.1710521977545	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	19540255	19552950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_19540659_19547562_19547690_19547891_19547953_19549288
tx.425	chr1	+	8952	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	108	junction_14	13.9013277632119	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTTTTCAGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	74700900	74740983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_74701049_74712002_74712170_74718056_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
tx.4250	chr12	+	3368	4	Genic_Genomic	ENSMUSG00000113901.2	novel	130	1	NA	NA	-289	14921	multi-exon	FALSE	canonical	1	2	junction_3	16.539514973407	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTATTGTCTCTATAAT	NA	False	NA	NA	False	NA	NA	NA	20121593	20136933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_20122009_20132442_20132570_20132771_20132833_20134168
tx.4251	chr12	+	1770	4	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-301	740	intron_retention	FALSE	canonical	1	2	junction_2	4.49691252107735	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	20246615	20328769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_20247044_20325015_20325414_20326835_20326942_20327931
tx.4252	chr12	+	3225	4	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-301	48862	multi-exon	FALSE	canonical	3	38	junction_1	8.73053390247253	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	20246615	20295917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308
tx.4253	chr12	+	3193	3	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-300	742	intron_retention	FALSE	canonical	2	8	junction_1	2.5	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGTGAGTTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	20246616	20328771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_20247044_20325015_20326942_20327931
tx.4254	chr12	+	2678	4	Fusion	ENSMUSG00000116558.2_ENSMUSG00000116715.2	novel	883	3	NA	NA	-307	597	multi-exon	FALSE	canonical	2	4	junction_2	22.69116323349	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	20362208	20373393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336
tx.4255	chr12	+	4145	4	Fusion	ENSMUSG00000112951.3_ENSMUSG00000116537.2_ENSMUSG00000116606.2	novel	654	4	NA	NA	-319	2853	multi-exon	FALSE	canonical	3	21	junction_3	53.2228021309163	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATCAAATAAACCAA	NA	False	NA	NA	False	NA	NA	NA	20465618	20512065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20508554
tx.4256	chr12	+	3954	2	Fusion	ENSMUSG00000112951.3_ENSMUSG00000116537.2	novel	739	2	NA	NA	-300	2869	multi-exon	FALSE	canonical	3	27	junction_1	0	23	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	20465637	20512081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_20466065_20508554
tx.4257	chr12	-	4129	2	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	19	-6972	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAGTCTCTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	20865761	20861353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_20865068_20865346
tx.4258	chr12	-	4198	2	Genic_Genomic	ENSMUSG00000099759.2	novel	1735	2	NA	NA	20	-6974	multi-exon	FALSE	canonical	3	19	junction_1	0	43	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGAGTCTCTTATTC	NA	False	NA	NA	False	NA	NA	NA	20865760	20861355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_-_20865068_20865274
tx.4259	chr12	-	1810	4	NNC	ENSMUSG00000085642.9	novel	2004	4	NA	NA	2	747	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTCTGTGAGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	20971261	20923378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_20924221_20925110_20925262_20926698_20927097_20970842
tx.426	chr1	+	8127	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	-14	1906	-14	-8	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTTTTCAGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	74700889	74740983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
tx.4260	chr12	-	3461	5	NNC	ENSMUSG00000069755.6	novel	928	6	NA	NA	-1	405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.24037034920393	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTATTTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	20971264	20948169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_20950936_20952270_20952332_20952533_20952661_20964759_20964845_20970842
tx.4261	chr12	-	3375	4	NIC	ENSMUSG00000069755.6	novel	928	6	NA	NA	-1	404	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	1.69967317119759	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	20971264	20948170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_20950936_20952270_20952332_20952533_20952661_20970842
tx.4262	chr12	+	3888	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-88	-21988	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.2873915159509	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	21040448	21068441	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066271_21066365_21067954_21067994
tx.4263	chr12	+	2770	5	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-88	-23147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	36.2146379244636	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCACAAATTTATTGTCT	NA	False	NA	NA	False	NA	NA	NA	21040448	21067282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066271_21066365
tx.4264	chr12	+	3789	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-58	-21984	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	32.3938265723579	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTATTTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	21040478	21068445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066077_21066244_21067983_21068023
tx.4265	chr12	+	5547	27	FSM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-210	-1992	-4	0	multi-exon	FALSE	canonical	3	55	junction_4	9.27784470482579	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTTCATCTGTAAAGTA	NA	False	NA	NA	False	NA	NA	NA	21161744	21320172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
tx.4266	chr12	-	978	7	FSM	ENSMUSG00000062352.16	ENSMUST00000076260.12	1921	7	49	894	-16	4	multi-exon	FALSE	canonical	3	216	junction_3	20.4728817924807	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGAAGCCTTGGGGTC	NA	False	NA	NA	False	NA	NA	NA	21336236	21320700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
tx.4267	chr12	-	1140	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	-51	612	37	-1	multi-exon	FALSE	canonical	3	43	junction_6	78.2148039411693	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACAAAAGAGAAGCCTTG	NA	False	NA	NA	False	NA	NA	NA	21336149	21320705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
tx.4268	chr12	+	2278	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	0	221	0	0	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	982	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	21336358	21364836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
tx.4269	chr12	-	4231	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	46	166	7	128	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	302	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGGATTGCGTATATAA	NA	False	NA	NA	False	NA	NA	NA	21423587	21373683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
tx.427	chr1	+	6663	20	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	33.0931699106756	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCAGTGTTGGG	NA	False	NA	NA	False	NA	NA	NA	74700898	74740984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_74701049_74712002_74712170_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
tx.4270	chr12	-	2001	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	109	0	109	0	multi-exon	FALSE	canonical	3	3292	junction_3	152.582764426393	355	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	False	NA	NA	False	NA	NA	NA	21467328	21440329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
tx.4271	chr12	-	1873	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	66	258	17	0	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	2239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	False	NA	NA	False	NA	NA	NA	21467572	21440329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
tx.4272	chr12	+	634	5	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-7	166	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTTCTGTCTTAGTTA	6093	False	NA	NA	False	NA	NA	NA	21593300	21604688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
tx.4273	chr12	-	2373	4	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_3	39.6063967897443	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	21828904	21807779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_-_21809538_21810872_21810934_21811135_21811263_21828477
tx.4274	chr12	-	3280	4	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-10	-10392	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.3372087784044	18	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	22206657	22176148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_22178816_22180145_22180207_22180406_22180534_22206232
tx.4275	chr12	-	3153	3	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-13	-10395	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.5	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	22206660	22176151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_22178816_22180145_22180207_22206232
tx.4276	chr12	-	2879	4	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	11.0855260988773	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	22302694	22291526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_-_22294077_22295404_22295466_22295667_22295795_22302553
tx.4277	chr12	-	2826	4	NIC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-43	2188	intron_retention	FALSE	canonical	2	7	junction_1	4.08248290463863	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTGGAGAGAAATATAT	NA	False	NA	NA	False	NA	NA	NA	22673389	22633701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_22635913_22637248_22637310_22637509_22637637_22672962
tx.4278	chr12	-	2669	5	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-52	2190	intron_retention	TRUE	non_canonical	0	0	junction_1	6.28490254498827	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGGAGAGAAATATATGA	NA	False	NA	NA	False	NA	NA	NA	22673398	22633699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_22635035_22635202_22635913_22637248_22637310_22637509_22637637_22672962
tx.4279	chr12	-	3047	4	Genic_Genomic	ENSMUSG00000113569.2_ENSMUSG00000113574.2	novel	1449	1	NA	NA	-304	903	multi-exon	FALSE	canonical	3	7	junction_1	18.8030730348939	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAGTCTCCATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	22795716	22774239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_-_22776671_22778007_22778069_22778268_22778396_22795288
tx.428	chr1	+	7956	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-10	-8	intron_retention	FALSE	canonical	1	1	junction_1	34.5028179203445	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTTTTCAGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	74700893	74740983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_74701049_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
tx.4280	chr12	-	4206	4	Genic_Genomic	ENSMUSG00000113798.2	novel	126	1	NA	NA	-299	44136	multi-exon	FALSE	canonical	3	4	junction_1	5.79271573232759	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTATTTGGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	23239698	23195137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_-_23198731_23200064_23200126_23200325_23200453_23239273
tx.4281	chr12	-	4412	4	Genic_Genomic	ENSMUSG00000112997.2	novel	126	1	NA	NA	-302	21705	multi-exon	FALSE	canonical	3	21	junction_3	10.6249183003395	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	23684778	23662645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_-_23666442_23667883_23667945_23668146_23668274_23684350
tx.4282	chr12	+	6989	1	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTTTCCGTGTCGTTAT	NA	False	NA	NA	False	NA	NA	NA	23748054	23755043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_23748100_23755000
tx.4283	chr12	-	1930	4	NNC	ENSMUSG00000073158.5	novel	2245	4	NA	NA	-22	-331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.7044966667418	19	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATATCTATAGATGTTA	NA	False	NA	NA	False	NA	NA	NA	24147269	24093533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_24094850_24124359_24124421_24124622_24124750_24146843
tx.4284	chr12	-	4326	4	Genic_Genomic	ENSMUSG00000112975.2	novel	126	1	NA	NA	-301	39808	multi-exon	FALSE	canonical	3	16	junction_2	4.08248290463863	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	24302483	24262248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_-_24265960_24267293_24267355_24267554_24267682_24302056
tx.4285	chr12	+	4612	2	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACCGTGGAAGAATCT	NA	False	NA	NA	False	NA	NA	NA	24410325	24415001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_24414638_24414701
tx.4286	chr12	+	1983	15	FSM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	227	-1	-25	1	multi-exon	FALSE	canonical	3	207	junction_4	28.2355254592363	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCTGGAAACTTGCATT	NA	False	NA	NA	False	NA	NA	NA	24548584	24608539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
tx.4287	chr12	+	1922	14	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	2076	-3	1805	3	3prime_fragment	FALSE	canonical	3	207	junction_3	27.8701554019739	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGGAAACTTGCATTCA	NA	False	NA	NA	False	NA	NA	NA	24550433	24608541	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
tx.4288	chr12	+	3490	16	FSM	ENSMUSG00000020656.17	ENSMUST00000085553.13	3469	16	-21	0	-21	0	multi-exon	FALSE	canonical	1	3	junction_5	7.44938476206816	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTCGGCTCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	24622260	24667387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24631718_24632883_24632961_24634303_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24658027_24658080_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
tx.4289	chr12	+	3985	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	92	9	92	-9	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGAGTGATGTGTTA	NA	False	NA	NA	False	NA	NA	NA	24701364	24712779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
tx.429	chr1	+	7631	18	ISM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	17324	1905	171	-7	3prime_fragment	FALSE	canonical	3	108	junction_13	14.2292160091586	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCAGTGTTGGG	1954	False	NA	NA	False	NA	NA	NA	74718227	74740984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
tx.4290	chr12	+	3441	2	ISM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	3660	9	2780	-9	3prime_fragment	FALSE	canonical	3	234	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGAGTGATGTGTTA	NA	False	NA	NA	False	NA	NA	NA	24704932	24712779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_24705776_24710181
tx.4291	chr12	+	2102	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	42	49	42	-49	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	6785	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATGGCATACAAGTAT	NA	False	NA	NA	False	NA	NA	NA	24758281	24764096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
tx.4292	chr12	+	2737	12	FSM	ENSMUSG00000020646.18	ENSMUST00000221952.2	6792	12	-39	4094	-39	-2	multi-exon	FALSE	canonical	3	26	junction_3	37.4053074415034	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTAGATTCTATCTAAA	NA	False	NA	NA	False	NA	NA	NA	24881568	25010302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
tx.4293	chr12	+	2831	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-49	-431	-35	0	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATTCTATCTAAACA	NA	False	NA	NA	False	NA	NA	NA	24881572	25010304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
tx.4294	chr12	+	6771	11	NIC	ENSMUSG00000020646.18	novel	6792	12	NA	NA	-34	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	46.3172753948243	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGTTTGTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	24881573	25014397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_24881774_24928189_24928336_24932715_24932794_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
tx.4295	chr12	+	7090	29	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-26	-225	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	9.91340053685321	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCACGGAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	25024897	25109471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040671_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
tx.4296	chr12	+	7059	29	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-2	-225	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	8.28017055922134	34	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCACGGAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	25024925	25109471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
tx.4297	chr12	-	5177	10	FSM	ENSMUSG00000020642.14	ENSMUST00000020971.14	5164	10	-13	0	-13	0	multi-exon	FALSE	canonical	3	6	junction_8	13.9133118599987	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCCATCTTTTGT	8821	False	NA	NA	False	NA	NA	NA	26465266	26356792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26455317_26455392_26465099
tx.4298	chr12	-	5117	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-68	-237	-30	-3	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTGGCTCCATCTTT	8804	False	NA	NA	False	NA	NA	NA	26465283	26356795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
tx.4299	chr12	-	681	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	43	230	-32	0	multi-exon	TRUE	canonical	3	10789	junction_4	2567.89392736971	1513	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	NA	False	NA	NA	NA	28685909	28681082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
tx.430	chr1	+	8572	17	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	68	-5	intron_retention	FALSE	canonical	3	108	junction_12	13.2994360782704	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCAGTGTTGGGAT	1851	False	NA	NA	False	NA	NA	NA	74718124	74740986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
tx.4300	chr12	+	1440	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	15	0	-7	0	multi-exon	TRUE	canonical	3	155	junction_3	35.1318217284442	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	NA	False	NA	NA	NA	28699615	28709588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
tx.4301	chr12	+	1659	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-10	3	-10	-3	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	242	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGGTCTCTCGAGAGT	NA	False	NA	NA	False	NA	NA	NA	28725219	28732171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
tx.4302	chr12	-	2817	11	ISM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	3184	1	3108	-1	3prime_fragment	FALSE	canonical	3	94	junction_7	16.5242246414166	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCTGAGGAGACATGA	NA	False	NA	NA	False	NA	NA	NA	28797268	28740628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297
tx.4303	chr12	-	3343	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	35	-1	11	0	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8284	False	NA	NA	False	NA	NA	NA	28800417	28740626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
tx.4304	chr12	-	3222	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	7	1	1	0	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGAGGAGACATGAG	8237	False	NA	NA	False	NA	NA	NA	28800464	28740627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
tx.4305	chr12	+	1704	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	13	2374	13	0	multi-exon	FALSE	canonical	3	234	junction_3	17.1641887370187	239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGCTCTTTGTTTGTTTT	1111	False	NA	NA	False	NA	NA	NA	28801814	28917490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
tx.4306	chr12	+	6643	23	FSM	ENSMUSG00000020674.18	ENSMUST00000122328.8	6614	23	-36	7	-36	0	multi-exon	FALSE	canonical	2	15	junction_3	5.1578392554561	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGAGAATCTGTCCTTT	5851	False	NA	NA	False	NA	NA	NA	29987998	30067650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_29988324_30023991_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
tx.4307	chr12	+	4395	7	ISM	ENSMUSG00000020674.18	ENSMUST00000218620.2	4578	8	1978	4	1978	2	3prime_fragment	FALSE	canonical	3	18	junction_1	6.71854812358213	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGAATCTGTCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	30051940	30067652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
tx.4308	chr12	+	5456	3	FSM	ENSMUSG00000043061.11	ENSMUST00000218826.2	762	3	-2457	-2237	31	0	multi-exon	FALSE	canonical	3	172	junction_2	9.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	NA	NA	NA	30634455	30641214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_30637254_30638472_30638567_30638650
tx.4309	chr12	+	2952	5	FSM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	23	-4	23	4	multi-exon	FALSE	canonical	3	167	junction_1	9.17877987534291	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	30634447	30641218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650
tx.431	chr1	+	1950	9	FSM	ENSMUSG00000026170.7	ENSMUST00000027356.7	1892	9	-58	0	-58	0	multi-exon	TRUE	canonical	1	2	junction_5	1.98431348329844	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGGGGGGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	74752674	74777051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_74753051_74771077_74771269_74774435_74774636_74774712_74774911_74775022_74775196_74775839_74776007_74776175_74776258_74776337_74776551_74776701
tx.4310	chr12	-	1430	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	-2	1638	-2	912	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	542	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGCCTGCTTCTTAC	NA	False	NA	NA	False	NA	NA	NA	30961572	30944962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
tx.4311	chr12	-	1441	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	5	1308	5	912	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	488	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGCCTGCTTCTTAC	NA	False	NA	NA	False	NA	NA	NA	30961583	30944962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
tx.4312	chr12	+	1735	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	10	5	10	1	multi-exon	FALSE	canonical	3	40	junction_1	6.36153564813317	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTACTTTGTGTTCAC	8049	False	NA	NA	False	NA	NA	NA	30961676	31010156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
tx.4313	chr12	+	4653	2	FSM	ENSMUSG00000036136.10	ENSMUST00000041133.10	3088	2	4	-1569	4	1569	multi-exon	FALSE	canonical	2	2	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGAGTGTTTTCCTAGC	NA	False	NA	NA	False	NA	NA	NA	31123863	31131819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_31125322_31128624
tx.4314	chr12	+	5697	34	FSM	ENSMUSG00000002900.18	ENSMUST00000169088.8	5557	34	10	-150	10	-1	multi-exon	FALSE	canonical	3	20	junction_1	26.2601941375773	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATGTTTCTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	31315242	31379642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_31315344_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
tx.4315	chr12	+	3950	21	ISM	ENSMUSG00000002900.18	ENSMUST00000002979.16	5784	33	32331	2	19449	-2	3prime_fragment	FALSE	canonical	3	88	junction_1	23.1544272224558	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATGTTTCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	31347622	31379641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
tx.4316	chr12	-	2230	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	27	287	-12	-287	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	963	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACTGGTTATTCTGAG	NA	False	NA	NA	False	NA	NA	NA	31401425	31381562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
tx.4317	chr12	-	3829	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	1	107	1	0	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	31549553	31534934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
tx.4318	chr12	-	3807	5	ISM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	4866	0	4805	0	3prime_fragment	FALSE	canonical	3	107	junction_4	38.758063677124	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	31544749	31534934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580
tx.4319	chr12	-	3838	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	62	0	1	0	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	31549553	31534934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
tx.432	chr1	-	2109	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	-45	-2	-45	2	multi-exon	FALSE	canonical	3	148	junction_4	12.6426553656215	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTTTCCTTCTGTAG	6861	False	NA	NA	False	NA	NA	NA	75118380	75112409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
tx.4320	chr12	-	3837	6	FSM	ENSMUSG00000020659.17	ENSMUST00000185739.8	3945	6	0	108	0	-1	multi-exon	FALSE	canonical	3	17	junction_4	67.8250691116493	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCCTAGATGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	31549556	31534935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542176_31544580_31544749_31549521
tx.4321	chr12	-	1952	7	FSM	ENSMUSG00000020650.16	ENSMUST00000020979.9	1949	7	4	-7	4	7	multi-exon	FALSE	canonical	3	313	junction_3	46.7618077780005	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGAGTTTTTATTCTC	NA	False	NA	NA	False	NA	NA	NA	31684594	31645352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261
tx.4322	chr12	-	1791	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-23	4387	0	7	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGAGTTTTTATTCTC	NA	False	NA	NA	False	NA	NA	NA	31684657	31645352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
tx.4323	chr12	-	1638	6	NIC	ENSMUSG00000020648.4	novel	1773	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_3	43.5917423372822	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTATGACTCGCCTGTA	9077	False	NA	NA	False	NA	NA	NA	31704808	31690048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_31690944_31691500_31691728_31692762_31692886_31698764_31698887_31702289_31702441_31704688
tx.4324	chr12	-	1766	7	FSM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	7	0	7	0	multi-exon	FALSE	canonical	2	86	junction_6	14.7016627933336	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTATGACTCGCCTGTA	9067	False	NA	NA	False	NA	NA	NA	31704818	31690048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
tx.4325	chr12	+	5813	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	6	8563	6	-2	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGCAAGCCAAGTA	NA	False	NA	NA	False	NA	NA	NA	31704873	31979066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
tx.4326	chr12	+	2993	23	FSM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	3	1	3	-1	multi-exon	FALSE	canonical	3	25	junction_22	24.2086317506725	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTGTTTCTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	31704870	31987628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
tx.4327	chr12	-	2599	10	ISM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	6522	204	-3606	-204	3prime_fragment	FALSE	canonical	3	196	junction_6	14.3070387580621	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTGATTTCTGGTT	2967	False	NA	NA	False	NA	NA	NA	31994012	31976456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827
tx.4328	chr12	-	2643	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	297	202	-4	-202	multi-exon	FALSE	canonical	3	134	junction_10	30.1004983347452	303	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGATTTCTGGTTGA	NA	False	NA	NA	False	NA	NA	NA	32000237	31976454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
tx.4329	chr12	-	2703	9	FSM	ENSMUSG00000002996.18	ENSMUST00000167458.9	2733	9	4	26	2	-26	multi-exon	FALSE	canonical	3	134	junction_8	33.3164280048147	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGTGTTGGACTT	NA	False	NA	NA	False	NA	NA	NA	32000218	31979407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
tx.433	chr1	-	1928	9	NIC	ENSMUSG00000033159.15	novel	2429	10	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	50.7222830716442	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGCCTTTTCCTTCT	9307	False	NA	NA	False	NA	NA	NA	75119342	75112413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75119286
tx.4330	chr12	-	3393	11	FSM	ENSMUSG00000002997.16	ENSMUST00000036497.16	3378	11	-15	0	-15	0	multi-exon	FALSE	canonical	2	12	junction_4	4.56508488420533	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCCAAGCATGGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	32111310	32008474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
tx.4331	chr12	+	4487	11	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	-12	18	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	260.465371978695	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGATTGTGTGTATC	NA	False	NA	NA	False	NA	NA	NA	32870321	32903366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
tx.4332	chr12	+	4546	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	-9	-10	-9	10	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	1332	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTAAATTTGATTG	NA	False	NA	NA	False	NA	NA	NA	32870324	32903358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
tx.4333	chr12	+	2642	11	NIC	ENSMUSG00000020572.9	novel	411	4	NA	NA	-39	-1741	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	257.16743573011	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	False	NA	NA	False	NA	NA	NA	32870760	32901607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_32870909_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
tx.4334	chr12	+	4127	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	21	-2129	21	-827	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	390	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGATTTAAGATTATAC	8446	False	NA	NA	False	NA	NA	NA	33004203	33029032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
tx.4335	chr12	+	5926	2	ISM	ENSMUSG00000020570.16	ENSMUST00000218816.2	529	4	4320	-1198	4311	8	3prime_fragment	FALSE	canonical	3	285	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCCCGTTGTTATATT	NA	False	NA	NA	False	NA	NA	NA	33019715	33026911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_33024319_33025588
tx.4336	chr12	+	1680	4	FSM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	-4	-1	-4	1	multi-exon	FALSE	canonical	2	8	junction_2	2.35702260395516	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCTGTACATTGAGTC	NA	False	NA	NA	False	NA	NA	NA	33197705	33301146	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849
tx.4337	chr12	+	465	4	FSM	ENSMUSG00000020562.8	ENSMUST00000020878.8	673	4	211	-3	211	3	multi-exon	FALSE	canonical	3	39	junction_3	13.0213499897497	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTCTGGTTTCATTC	NA	False	NA	NA	False	NA	NA	NA	33445063	33451269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_33445198_33448277_33448443_33448546_33448635_33451191
tx.4338	chr12	+	3223	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-19	1121	-19	-1121	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	722	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	33479614	33490270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
tx.4339	chr12	+	3402	4	NNC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	-16	-945	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.223213851893	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTGAATTTATAATTTA	NA	False	NA	NA	False	NA	NA	NA	33479617	33490446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_33479908_33483503_33483646_33486934_33487150_33487691
tx.434	chr1	-	2490	9	FSM	ENSMUSG00000033159.15	ENSMUST00000168720.8	3669	9	-35	1214	24	0	multi-exon	TRUE	canonical	3	100	junction_8	23.1405353222435	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTTTTCCTTCTGT	9332	False	NA	NA	False	NA	NA	NA	75119317	75112411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701
tx.4340	chr12	+	6222	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	7	2	7	-2	multi-exon	FALSE	canonical	3	72	junction_14	10.0218960281975	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGATGTGTTTACTTGG	NA	False	NA	NA	False	NA	NA	NA	35097191	35197476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
tx.4341	chr12	+	6255	26	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	18.4266763145175	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGATGTGTTTACTTGG	NA	False	NA	NA	False	NA	NA	NA	35097191	35197476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
tx.4342	chr12	+	6125	25	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	7	-10	combination_of_known_junctions	TRUE	canonical	0	0	junction_7	21.6735565968199	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACAGTTCTGATGTGT	NA	False	NA	NA	False	NA	NA	NA	35097191	35197468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
tx.4343	chr12	-	5556	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	-10	2	-10	-2	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTGTTTTCATGCAAGT	NA	False	NA	NA	False	NA	NA	NA	35585047	35547974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
tx.4344	chr12	-	1967	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-37	2	-26	-2	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	525	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATGGGTGTTTAAATC	NA	False	NA	NA	False	NA	NA	NA	36092525	36064557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
tx.4345	chr12	-	1849	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	16	6	16	-6	multi-exon	FALSE	canonical	3	931	junction_9	81.950499068161	1095	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGTATATGGTCAGA	NA	False	NA	NA	False	NA	NA	NA	36206808	36141839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
tx.4346	chr12	+	2436	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	20	0	20	0	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	212	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGTTTCATAATTCGT	NA	False	NA	NA	False	NA	NA	NA	36207132	36247290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
tx.4347	chr12	+	2634	10	FSM	ENSMUSG00000043153.7	ENSMUST00000062041.6	2690	10	61	-5	-3	5	multi-exon	FALSE	canonical	3	10	junction_5	4.59468291736341	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCCTACAACATGTTAA	NA	False	NA	NA	False	NA	NA	NA	36431578	36739448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698_36526745_36551976_36552072_36571431_36571522_36571957_36572051_36597827_36597960_36738247
tx.4348	chr12	-	1386	3	NNC	ENSMUSG00000113608.2	novel	549	2	NA	NA	27471	907	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTTATCTTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	38098263	38096184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_38096710_38097291_38097424_38097534
tx.4349	chr12	-	3708	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	22	-2530	22	-1	multi-exon	FALSE	canonical	3	220	junction_1	0	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGCGTTAGACTATCA	NA	False	NA	NA	False	NA	NA	NA	40088002	40083290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_40086833_40087836
tx.435	chr1	-	2422	10	FSM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	9	-2	9	-1	multi-exon	FALSE	canonical	3	17	junction_9	47.8820567438857	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGCCTTTTCCTTCTG	9317	False	NA	NA	False	NA	NA	NA	75119332	75112412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701_75119205_75119286
tx.4350	chr12	-	3656	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	53	1	0	-1	multi-exon	FALSE	canonical	3	67	junction_1	0	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGCGTTAGACTATCA	NA	False	NA	NA	False	NA	NA	NA	40087375	40083290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_40086833_40087261
tx.4351	chr12	-	5482	4	ISM	ENSMUSG00000001627.13	ENSMUST00000165027.9	1293	11	5591	-233	-4860	2	3prime_fragment	FALSE	canonical	3	660	junction_2	15.8394724940223	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTAGTGAGCAGATG	NA	False	NA	NA	False	NA	NA	NA	40261921	40253127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987
tx.4352	chr12	-	1810	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	5	1563	1	1	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	544	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	NA	False	NA	NA	NA	40273183	40253128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
tx.4353	chr12	-	1567	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	117	504	-11	-504	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAACTTTGTCATTAT	NA	False	NA	NA	False	NA	NA	NA	40495784	40365548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
tx.4354	chr12	-	3400	11	NIC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	-13	-504	intron_retention	FALSE	canonical	3	359	junction_5	47.5736271478221	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAACTTTGTCATTAT	NA	False	NA	NA	False	NA	NA	NA	40495786	40365548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
tx.4355	chr12	+	8477	52	NIC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_26	3.40341552215641	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGCCTTTATTCCAG	NA	False	NA	NA	False	NA	NA	NA	40495998	40896873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
tx.4356	chr12	+	372	4	FSM	ENSMUSG00000056899.11	ENSMUST00000140790.2	347	4	-37	12	0	2	multi-exon	FALSE	canonical	3	185	junction_1	32.8667342798493	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAACTCAGTAACTTACT	NA	False	NA	NA	False	NA	NA	NA	41074088	41160944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_41074145_41074559_41074633_41118308_41118446_41160838
tx.4357	chr12	+	171	2	ISM	ENSMUSG00000056899.11	ENSMUST00000134965.8	977	6	601219	251483	557236	-251483	internal_fragment	FALSE	canonical	3	237	junction_1	0	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCGAGTAAACCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	41675546	41750542	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_41675613_41750437
tx.4358	chr12	-	2064	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	207	190	-51	-190	multi-exon	FALSE	canonical	3	92	junction_1	7	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGTTACTATCTCAT	NA	False	NA	NA	False	NA	NA	NA	44256902	44252531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_44254189_44254869_44255097_44256722
tx.4359	chr12	+	3501	10	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	85.0700510182456	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTGTATATCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	44315934	44359280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354931_44358107
tx.436	chr1	+	2601	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	-44	4	-36	0	multi-exon	FALSE	canonical	3	93	junction_6	8.45576726264388	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGTCTGCCTGCT	NA	False	NA	NA	False	NA	NA	NA	75119385	75124553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
tx.4360	chr12	+	3059	10	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	6	-56	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	80.5059617453466	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATTGTTCAAGGCTAAT	NA	False	NA	NA	False	NA	NA	NA	44315936	44359070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_44316085_44329557_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
tx.4361	chr12	+	3465	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	7	10035	7	4	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	358	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTGTATATCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	44315937	44359280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
tx.4362	chr12	-	4308	6	FSM	ENSMUSG00000046314.17	ENSMUST00000053768.14	4553	6	245	0	-146	0	multi-exon	FALSE	canonical	0	0	junction_4	7.73563184232549	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTCTCTCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	45121247	44899266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_44902661_44908007_44908166_44948656_44948823_44949642_44949774_45066249_45066439_45120977
tx.4363	chr12	-	4188	5	FSM	ENSMUSG00000021047.8	ENSMUST00000021438.8	7154	5	-415	3381	-415	3177	multi-exon	FALSE	canonical	3	11	junction_1	3.56195171219375	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTCTCCCGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	46866127	46744680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_46747757_46760280_46760353_46767472_46767640_46863668_46863813_46865398
tx.4364	chr12	-	4064	3	NNC	ENSMUSG00000021047.8	novel	7154	5	NA	NA	-428	-42634	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACAAGTGCAATATCTG	NA	False	NA	NA	False	NA	NA	NA	46866140	46809996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_46813175_46863668_46863813_46865398
tx.4365	chr12	-	3793	18	NIC	ENSMUSG00000002688.9	novel	3653	19	NA	NA	-164	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	4.97606729001332	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTCATACTAATCAA	NA	False	NA	NA	False	NA	NA	NA	50696045	50388013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50472221_50472383_50474885_50475018_50536685_50536825_50695498
tx.4366	chr12	+	6282	14	NIC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	42.4542914662973	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGATGTGAGATTTATTTC	NA	False	NA	NA	False	NA	NA	NA	51395058	51423768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51414557_51414740_51415828_51416002_51418342_51418534_51419212
tx.4367	chr12	+	6579	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	221	3	-6	-3	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGATGTGAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	51395064	51423766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
tx.4368	chr12	+	5181	15	NNC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	12	-1348	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	44.6170210954135	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTGAAGTGTTCATA	NA	False	NA	NA	False	NA	NA	NA	51395082	51422421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418377_51418534_51419212
tx.4369	chr12	+	2109	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	-12	-1	-12	1	multi-exon	FALSE	canonical	3	358	junction_5	42.0133700610757	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATTCTTGTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	51424350	51496885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
tx.437	chr1	+	2447	10	FSM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	-11	2	-3	0	multi-exon	FALSE	canonical	3	9	junction_9	31.2054126359159	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	NA	False	NA	NA	NA	75119426	75124551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073_75123364_75123474
tx.4370	chr12	+	2764	14	FSM	ENSMUSG00000020952.11	ENSMUST00000219434.2	2749	14	-12	-3	-12	3	multi-exon	TRUE	canonical	3	21	junction_13	120.151925523899	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTTTAAGATTTAT	NA	False	NA	NA	False	NA	NA	NA	51424350	51464001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462405
tx.4371	chr12	-	3842	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-26	-1025	-26	1012	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	230	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	NA	False	NA	NA	NA	51738706	51655402	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
tx.4372	chr12	-	3954	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-27	1012	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	NA	False	NA	NA	NA	51738707	51655402	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
tx.4373	chr12	-	4110	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	-52	-1012	-42	1012	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	NA	False	NA	NA	NA	51738722	51655402	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
tx.4374	chr12	+	1067	5	NNC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.6749019178793	22	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGACGTTTGAGTGAA	NA	False	NA	NA	False	NA	NA	NA	51737785	51785715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51785325
tx.4375	chr12	+	1052	5	NIC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	-26	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	28.6749019178793	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTGACGTTTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	51737789	51785714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51785335
tx.4376	chr12	-	4467	19	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	60415	-1	-3890	1	3prime_fragment	FALSE	canonical	3	84	junction_16	29.2769344175392	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGTGTCGTGTTACT	NA	False	NA	NA	False	NA	NA	NA	51815904	51790503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311
tx.4377	chr12	-	9060	43	FSM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	-71	-1	-71	1	multi-exon	FALSE	canonical	3	48	junction_19	32.7528018915334	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGTGTCGTGTTACT	NA	False	NA	NA	False	NA	NA	NA	51876390	51790503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
tx.4378	chr12	-	9079	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-231	1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_19	32.5636390713501	46	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGTGTCGTGTTACT	NA	False	NA	NA	False	NA	NA	NA	51876550	51790503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
tx.4379	chr12	-	7812	36	FSM	ENSMUSG00000035181.7	ENSMUST00000040583.7	7763	36	-49	0	-49	0	multi-exon	FALSE	canonical	1	15	junction_35	10.655036176305	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	9950	False	NA	NA	False	NA	NA	NA	52018153	51922653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
tx.438	chr1	+	1195	10	FSM	ENSMUSG00000026197.13	ENSMUST00000160439.8	1206	10	6	5	-3	-1	multi-exon	FALSE	canonical	3	87	junction_1	30.0361921605614	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTATGAGTGCTGTTTCT	2038	False	NA	NA	False	NA	NA	NA	75145295	75148268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
tx.4380	chr12	-	7809	36	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_30	13.2698830408699	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	9956	False	NA	NA	False	NA	NA	NA	52018147	51922653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999431_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
tx.4381	chr12	-	1373	3	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	4	-1397	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	74	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCCAGTTTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	52053280	52045686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_52046657_52051661_52051732_52052947
tx.4382	chr12	-	1167	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1397	0	-1397	multi-exon	FALSE	canonical	3	170	junction_1	5	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCCAGTTTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	52053284	52045686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_52046657_52051661_52051732_52053157
tx.4383	chr12	+	1182	11	FSM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	19	1786	0	-1786	multi-exon	FALSE	canonical	3	215	junction_4	16.265300489078	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGCTCTATGATGATT	NA	False	NA	NA	False	NA	NA	NA	52144538	52357741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
tx.4384	chr12	+	7115	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-213	819	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	114.79547029391	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTACACTGACTTGTG	NA	False	NA	NA	False	NA	NA	NA	52550541	52616437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_52550660_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
tx.4385	chr12	+	7046	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-19	816	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGTTACACTGACTT	NA	False	NA	NA	False	NA	NA	NA	52550779	52616434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
tx.4386	chr12	+	7043	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-19	816	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	115.531741670129	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGTTACACTGACTT	NA	False	NA	NA	False	NA	NA	NA	52550779	52616434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_52550832_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
tx.4387	chr12	+	7336	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	30	816	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGTTACACTGACTT	NA	False	NA	NA	False	NA	NA	NA	52550828	52616434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
tx.4388	chr12	+	7306	7	NNC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	59	818	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	122.471311833516	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTACACTGACTTGT	NA	False	NA	NA	False	NA	NA	NA	52550857	52616436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_52551171_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
tx.4389	chr12	+	6370	6	FSM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	626	-1799	626	816	multi-exon	FALSE	canonical	3	174	junction_1	60.5276796185018	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGTTACACTGACTT	NA	False	NA	NA	False	NA	NA	NA	52563485	52616434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
tx.439	chr1	+	1194	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	43.344727846634	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTATGAGTGCTGTTTCT	2036	False	NA	NA	False	NA	NA	NA	75145293	75148268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_75145352_75145477_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
tx.4390	chr12	+	6992	6	NIC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	3	818	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	112.458703531563	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTACACTGACTTGT	NA	False	NA	NA	False	NA	NA	NA	52562862	52616436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
tx.4391	chr12	-	2024	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	-5	643	-5	-643	multi-exon	FALSE	canonical	3	55	junction_3	5.24404424085076	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTGAGTCGTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	54250651	54226409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
tx.4392	chr12	-	1335	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	7	4	7	-4	multi-exon	FALSE	canonical	3	293	junction_1	0	178	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCAGTCTCTTTTATGG	NA	False	NA	NA	False	NA	NA	NA	54703351	54692180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54693321_54703156
tx.4393	chr12	-	1053	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	12	3121	-7	5	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGGTTATCAACCTCTA	NA	False	NA	NA	False	NA	NA	NA	54742654	54720245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
tx.4394	chr12	-	1910	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	25	-7	9	7	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	914	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTCTTTTCTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	54842463	54793126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
tx.4395	chr12	-	1879	13	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	201	-6	-18	6	3prime_fragment	FALSE	canonical	3	824	junction_2	114.005725977056	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTTTCTTTATCT	NA	False	NA	NA	False	NA	NA	NA	54842287	54793127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238
tx.4396	chr12	-	3065	4	NIC	ENSMUSG00000062929.9	novel	2940	4	NA	NA	-48	-3	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	126.518334200577	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTTGAGATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	54909449	54905596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_54908023_54908121_54908199_54908310_54908619_54909195
tx.4397	chr12	-	2945	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221088.2	474	4	-258	-2213	86	-20	multi-exon	FALSE	canonical	3	25	junction_3	144.270579121316	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATACATGAAAA	NA	False	NA	NA	False	NA	NA	NA	54909497	54905621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909195
tx.4398	chr12	-	2819	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	-101	8	-22	0	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGCTGTTGAGATG	NA	False	NA	NA	False	NA	NA	NA	54909684	54905601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
tx.4399	chr12	-	2722	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-112	-1482	-33	3	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCTGTTGAGATGTGT	NA	False	NA	NA	False	NA	NA	NA	54909695	54905598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
tx.44	chr1	+	5802	39	ISM	ENSMUSG00000048960.14	ENSMUST00000027056.12	11053	40	67857	4810	-37208	667	3prime_fragment	TRUE	canonical	2	17	junction_16	5.02679799285209	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATTATCATCGTATAAA	NA	False	NA	NA	False	NA	NA	NA	11131545	11369095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_11131622_11136017_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
tx.440	chr1	+	1109	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	47.0130005660373	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGTGCTGTTTCTT	2024	False	NA	NA	False	NA	NA	NA	75145281	75148269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
tx.4400	chr12	-	3050	3	NIC	ENSMUSG00000062929.9	novel	2726	4	NA	NA	10	0	intron_retention	FALSE	canonical	3	292	junction_2	21	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGAGATGTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	54909652	54905593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_54908023_54908121_54908619_54909528
tx.4401	chr12	-	2963	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	-22	-1	-22	1	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGCTGTTGAGATGT	NA	False	NA	NA	False	NA	NA	NA	54909684	54905600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
tx.4402	chr12	-	5600	26	ISM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	545	-3	-26	3	3prime_fragment	TRUE	canonical	2	24	junction_21	6.49307323229917	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATTCTGAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	55032747	54940332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450
tx.4403	chr12	-	5634	27	FSM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	154	0	-17	0	multi-exon	FALSE	canonical	2	19	junction_26	7.265566842199	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAATTCTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	55033138	54940335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
tx.4404	chr12	-	1098	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	-8	15	-8	0	multi-exon	FALSE	canonical	3	143	junction_4	27.3898536256157	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGAAATGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	55126903	55092460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
tx.4405	chr12	-	1710	5	ISM	ENSMUSG00000062198.6	ENSMUST00000222572.2	798	6	-16	2938	-10	-2494	5prime_fragment	FALSE	canonical	3	37	junction_1	70.9449610613749	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55126905	55103032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
tx.4406	chr12	-	1642	5	FSM	ENSMUSG00000062198.6	ENSMUST00000156852.2	4110	5	-26	2494	-24	-2494	multi-exon	FALSE	canonical	3	143	junction_1	29.9864552756741	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55126919	55103032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
tx.4407	chr12	+	2159	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	252	2087	-12	389	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	363	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2828	False	NA	NA	False	NA	NA	NA	55127298	55160065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
tx.4408	chr12	+	1386	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	26	2510	26	-2510	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGATTTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	55171279	55186379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
tx.4409	chr12	+	2159	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	254	1233	-12	-1233	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	563	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2608	False	NA	NA	False	NA	NA	NA	55202142	55235125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
tx.441	chr1	-	2950	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	17	-1	1	1	multi-exon	TRUE	canonical	3	123	junction_18	16.1765910736914	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGGTTTGGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	75157019	75148359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
tx.4410	chr12	+	1402	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	10	2510	10	-2510	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGATTTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	55171263	55186379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
tx.4411	chr12	+	2166	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	247	1229	247	-413	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	134	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	55277199	55309392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
tx.4412	chr12	+	2527	16	Fusion	ENSMUSG00000112368.2_ENSMUSG00000079108.7	novel	3642	16	NA	NA	221	614	multi-exon	FALSE	canonical	3	11	junction_15	308.573376831004	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTGTGGATTTCCTT	NA	False	NA	NA	False	NA	NA	NA	55277173	55326113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55325297
tx.4413	chr12	-	1532	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	292	2511	-44	-2511	3prime_fragment	FALSE	canonical	3	216	junction_9	34.6025047262959	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTGCTTACTAGAG	NA	False	NA	-114	True	NA	NA	NA	55349491	55328286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
tx.4414	chr12	-	1706	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	-1	2511	-1	-2511	multi-exon	FALSE	canonical	3	69	junction_13	62.3614203298973	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTGCTTACTAGAG	NA	False	NA	NA	False	NA	NA	NA	55349784	55328286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
tx.4415	chr12	+	2508	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	611	3	5	-3	multi-exon	FALSE	canonical	3	113	junction_3	136.205726751851	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTTTAGTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	55350032	55429278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
tx.4416	chr12	+	531	3	ISM	ENSMUSG00000021023.15	ENSMUST00000183654.2	943	7	73880	19	73880	-2	3prime_fragment	FALSE	canonical	3	389	junction_1	18	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTAGTTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	55423950	55429279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_55424048_55426066_55426263_55429041
tx.4417	chr12	+	979	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	63	0	43	0	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	958	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGTGCATCCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	55445622	55465239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
tx.4418	chr12	-	2050	5	ISM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	49	0	49	0	intron_retention	FALSE	canonical	3	207	junction_3	19.0984292547843	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	False	NA	NA	False	NA	NA	NA	55539383	55536194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454
tx.4419	chr12	-	1529	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	49	0	49	0	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	False	NA	NA	False	NA	NA	NA	55539383	55536194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
tx.442	chr1	-	3895	16	NIC	ENSMUSG00000033124.17	novel	4041	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	12.1043610139303	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	75168357	75157508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168130
tx.4420	chr12	-	2912	9	ISM	ENSMUSG00000021027.18	ENSMUST00000085385.7	7901	41	144024	-7	16640	4	3prime_fragment	FALSE	canonical	3	36	junction_8	10.7579912158358	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGATCGTATTCTATTG	NA	False	NA	NA	False	NA	NA	NA	55723928	55649676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188
tx.4421	chr12	-	7903	41	FSM	ENSMUSG00000021027.18	ENSMUST00000085385.7	7901	41	-2	0	-2	0	multi-exon	FALSE	canonical	1	23	junction_22	22.9185514376454	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCCATGATCGTAT	9945	False	NA	NA	False	NA	NA	NA	55867954	55649683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
tx.4422	chr12	-	4028	16	ISM	ENSMUSG00000021027.18	ENSMUST00000219542.2	3426	17	-32	14699	-32	-14699	5prime_fragment	FALSE	canonical	3	70	junction_6	10.403845442912	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTAAACCTTCCCAGCCT	9915	False	NA	NA	False	NA	NA	NA	55867984	55783662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
tx.4423	chr12	+	2579	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	30	0	-16	0	multi-exon	FALSE	canonical	3	160	junction_3	20.0277585143997	276	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTTGTGTGTTAC	NA	False	NA	NA	False	NA	NA	NA	55883138	55916521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
tx.4424	chr12	-	1453	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	46	13	-13	-13	multi-exon	FALSE	canonical	3	215	junction_1	38.7193427113633	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATAAACTTTTTCATG	NA	False	NA	NA	False	NA	NA	NA	56392633	56375100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
tx.4425	chr12	+	3976	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	30	-2286	30	2286	multi-exon	FALSE	canonical	3	317	junction_1	0	576	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTATGTTTTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	57277227	57288954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_57277398_57285148
tx.4426	chr12	+	4080	3	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	34	2286	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	3.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTATGTTTTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	57277231	57288954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_57277398_57281366_57281475_57285148
tx.4427	chr12	-	3726	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	22	361	22	-361	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	1024	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAAGAGTGCTTTTTT	2700	False	NA	NA	False	NA	NA	NA	59058781	59005529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
tx.4428	chr12	+	2805	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-1206	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	277.335781684349	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGAAATGGCAAATC	NA	False	NA	NA	False	NA	NA	NA	59058972	59075190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_59060477_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
tx.4429	chr12	+	2733	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	22	4	intron_retention	FALSE	canonical	1	279	junction_3	170.872028138019	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGATGAAATGGCAAAT	NA	False	NA	NA	False	NA	NA	NA	59060200	59075189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59068523_59071788_59071900_59073640_59073700_59074522
tx.443	chr1	-	3825	16	FSM	ENSMUSG00000033124.17	ENSMUST00000188347.7	4041	16	216	0	-18	0	multi-exon	FALSE	canonical	3	15	junction_15	10.8226100774669	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	75168624	75157508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168467
tx.4430	chr12	+	1490	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	27	71	27	0	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	290	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATACAGATGAAATGGC	NA	False	NA	NA	False	NA	NA	NA	59060205	59075185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
tx.4431	chr12	-	1210	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	7	38	-2	-2	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTGAAAGTTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	59108240	59089915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
tx.4432	chr12	+	3316	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	40	129	2	-129	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	465	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACTTGTATTAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	59113709	59120655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
tx.4433	chr12	+	2858	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	169	1407	2	0	multi-exon	FALSE	canonical	3	371	junction_5	45.1017752679996	422	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	NA	False	NA	NA	NA	59178240	59236962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
tx.4434	chr12	+	2786	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	2	-3	2	0	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	NA	False	NA	NA	NA	59178240	59236962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
tx.4435	chr12	+	3684	5	ISM	ENSMUSG00000021000.18	ENSMUST00000176617.8	1935	17	27763	-221	-2239	0	3prime_fragment	FALSE	canonical	3	460	junction_3	8.68907359849138	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	NA	False	NA	NA	NA	59224059	59236959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
tx.4436	chr12	-	3725	4	FSM	ENSMUSG00000035329.8	ENSMUST00000043204.8	3688	4	-37	0	-37	0	multi-exon	FALSE	canonical	3	48	junction_1	0.942809041582063	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGATGAATTTTATT	NA	False	NA	NA	False	NA	NA	NA	59266548	59247440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_59249466_59251096_59251783_59252766_59252878_59265645
tx.4437	chr12	+	2955	5	FSM	ENSMUSG00000047227.6	ENSMUST00000058135.6	1468	5	-58	-1429	-58	1428	multi-exon	FALSE	canonical	3	22	junction_3	5.11737237261468	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGTCTCCCAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	64964621	64972794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_64964966_64967578_64968104_64969098_64969189_64970280_64970416_64970933
tx.4438	chr12	-	6436	5	FSM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	23	0	2	0	multi-exon	FALSE	canonical	3	14	junction_1	2.9474565306379	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATCATGTAATCATTA	NA	False	NA	NA	False	NA	NA	NA	65012285	64985606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65004512_65012182
tx.4439	chr12	+	3242	6	ISM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-73	39154	-73	962	5prime_fragment	FALSE	canonical	3	80	junction_1	12.57616793781	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCTGCCATGAAGCTTG	NA	False	NA	NA	False	NA	NA	NA	65012504	65030193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101
tx.444	chr1	-	3903	16	FSM	ENSMUSG00000033124.17	ENSMUST00000189702.7	4110	16	202	5	1	0	multi-exon	FALSE	canonical	3	11	junction_15	11.6714276000077	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	75168368	75157508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168130
tx.4440	chr12	+	6393	20	FSM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-21	0	-21	0	multi-exon	FALSE	canonical	3	16	junction_14	35.155846142648	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	False	NA	NA	False	NA	NA	NA	65012556	65069347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
tx.4441	chr12	+	6561	21	FSM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	-175	0	-39	0	multi-exon	FALSE	canonical	2	3	junction_8	35.8941499411812	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	False	NA	NA	False	NA	NA	NA	65012538	65069347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65037714_65037865_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
tx.4442	chr12	+	4686	15	FSM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	-1	-1228	0	-3	multi-exon	TRUE	canonical	3	88	junction_9	125.885678620058	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTCCTGTGGTCTCC	7507	False	NA	NA	False	NA	NA	NA	65083106	65110157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
tx.4443	chr12	+	4709	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	-7	intron_retention	FALSE	canonical	3	251	junction_3	70.8601909866652	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTATTTGTCCTGTGGT	7508	False	NA	NA	False	NA	NA	NA	65083107	65110153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
tx.4444	chr12	+	3803	12	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	1	1	intron_retention	FALSE	canonical	3	251	junction_3	66.9768678458935	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTTGATGAATTCATT	7509	False	NA	NA	False	NA	NA	NA	65083108	65108931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
tx.4445	chr12	+	4295	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	137.107192452556	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTCCTGTGGTCTCC	7510	False	NA	NA	False	NA	NA	NA	65083109	65110157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
tx.4446	chr12	+	4063	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	3	3	2	-3	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	223	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTCCTGTGGTCTCC	7510	False	NA	NA	False	NA	NA	NA	65083109	65110157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
tx.4447	chr12	+	2940	15	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	88	junction_9	116.631658984819	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7510	False	NA	NA	False	NA	NA	NA	65083109	65108934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
tx.4448	chr12	-	958	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	56	8	11	4	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	2937	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTATTTATTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	65120725	65109205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
tx.4449	chr12	+	7466	23	FSM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	-3	312	0	-312	multi-exon	TRUE	canonical	3	55	junction_4	33.1504521739726	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTGTCTCATGCC	9280	False	NA	NA	False	NA	NA	NA	65122376	65178520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
tx.445	chr1	-	3825	16	FSM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	-60	-1	-21	0	multi-exon	FALSE	canonical	3	19	junction_15	10.0013332444563	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	75168627	75157508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168467
tx.4450	chr12	+	4781	10	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	29735	325	-1232	-325	3prime_fragment	FALSE	canonical	3	99	junction_1	16.649620912898	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAACATGAACTTTTGT	NA	False	NA	NA	False	NA	NA	NA	65152114	65178507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
tx.4451	chr12	+	3565	10	NNC	ENSMUSG00000055884.9	novel	563	3	NA	NA	-5207	-227	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	41.1582312545134	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTCCAGTCCCAGCA	NA	False	NA	NA	False	NA	NA	NA	65159798	65178605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_65160036_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
tx.4452	chr12	+	3014	6	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	42712	226	86	-226	3prime_fragment	FALSE	canonical	3	115	junction_2	14.3303872941383	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCCAGTCCCAGCAG	NA	False	NA	NA	False	NA	NA	NA	65165091	65178606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
tx.4453	chr12	+	2706	4	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	46002	226	-3250	-226	3prime_fragment	FALSE	canonical	3	130	junction_2	10.6562449087639	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCCAGTCCCAGCAG	NA	False	NA	NA	False	NA	NA	NA	65168381	65178606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_65168865_65171587_65171961_65173288_65173581_65177048
tx.4454	chr12	-	5021	13	FSM	ENSMUSG00000047534.18	ENSMUST00000140391.8	5016	13	-5	0	-5	0	multi-exon	FALSE	canonical	3	216	junction_11	56.3414072123395	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	65219383	65179507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
tx.4455	chr12	-	3169	13	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	101.824467699184	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	65219362	65179507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65219222
tx.4456	chr12	-	3399	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	65219362	65179507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
tx.4457	chr12	-	4034	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	-17	0	1	0	multi-exon	FALSE	canonical	3	216	junction_12	54.2140181439599	427	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	65219371	65179507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
tx.4458	chr12	-	3253	12	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	130.458188102454	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	65219362	65179510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
tx.4459	chr12	+	2016	2	FSM	ENSMUSG00000035560.6	ENSMUST00000046331.5	2228	2	213	-1	9	1	multi-exon	FALSE	canonical	3	6	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGACCTCTTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	65272503	65275229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_65274272_65274981
tx.446	chr1	+	2734	13	FSM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	5	0	5	0	multi-exon	TRUE	canonical	2	42	junction_4	25.5582124222768	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	49	False	NA	NA	False	NA	NA	NA	75168808	75176031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
tx.4460	chr12	+	4556	2	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	232	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605040	68610272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_68609385_68610060
tx.4461	chr12	-	318	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	70	2	-62	-2	multi-exon	FALSE	canonical	3	25458	junction_2	210	828	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGTGTGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	69205890	69204497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_69204596_69205434_69205535_69205770
tx.4462	chr12	+	1490	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	11	-1	4	1	multi-exon	FALSE	canonical	3	105	junction_3	15.6276108929747	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATGTCTCAGCAGTTAA	NA	False	NA	NA	False	NA	NA	NA	69215598	69225784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
tx.4463	chr12	-	489	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	40	-3	-30	0	multi-exon	FALSE	canonical	3	5332	junction_1	0	1009	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTGTTTTGATT	NA	False	NA	NA	False	NA	NA	NA	69230817	69229511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_69229940_69230756
tx.4464	chr12	-	2084	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	1293	13	1293	-13	multi-exon	FALSE	canonical	3	240	junction_2	19	265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGAGTTAACGTTTGT	NA	False	NA	NA	False	NA	NA	NA	69243910	69235873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_69237169_69239581_69239726_69243265
tx.4465	chr12	+	1565	3	NNC	ENSMUSG00000097061.3	novel	2545	2	NA	NA	0	1808	intron_retention	FALSE	canonical	0	0	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTATTTTTGAGAC	2113	False	NA	NA	False	NA	NA	NA	69243984	69248449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_69245168_69246112_69246313_69248267
tx.4466	chr12	-	1703	19	FSM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	3	0	3	0	multi-exon	TRUE	canonical	3	369	junction_1	34.9372011570955	379	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACACATTGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	69274966	69248546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
tx.4467	chr12	+	2590	13	FSM	ENSMUSG00000051890.14	ENSMUST00000063445.13	2620	13	33	-3	33	3	multi-exon	FALSE	canonical	1	2	junction_6	3.37474278855276	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGTGAATTTTAAATT	NA	False	NA	NA	False	NA	NA	NA	69288638	69331409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_69288788_69297526_69297598_69298144_69298263_69298701_69298821_69300465_69300545_69302948_69303033_69304796_69304881_69305342_69305402_69306274_69306388_69309922_69309996_69315015_69315101_69316599_69316653_69329906
tx.4468	chr12	+	1693	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	-10	222	-10	-222	multi-exon	TRUE	canonical	3	493	junction_10	56.6727937863977	558	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGTCTATTGTTAAAG	NA	False	NA	NA	False	NA	NA	NA	69343485	69357239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
tx.4469	chr12	-	3706	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	2	1024	2	22	multi-exon	TRUE	canonical	3	259	junction_6	33.0300526036517	545	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	NA	False	NA	NA	NA	69403937	69358319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
tx.447	chr1	+	1480	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	57.8389742195996	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTAGGTCAATGTGTC	NA	False	NA	NA	False	NA	NA	NA	75187486	75190887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
tx.4470	chr12	+	1556	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-18	-4	-18	4	multi-exon	FALSE	canonical	3	1327	junction_1	0	795	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCGTTTGTCTTTTATA	NA	False	NA	NA	False	NA	NA	NA	69418905	69420561	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_69418998_69419097
tx.4471	chr12	-	1905	6	FSM	ENSMUSG00000049882.11	ENSMUST00000238784.2	875	6	86	-1116	-7	893	multi-exon	FALSE	canonical	3	55	junction_4	48.4710222710435	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGACTCTGCTTCCAA	NA	False	NA	NA	False	NA	NA	NA	69629798	69623508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
tx.4472	chr12	-	1058	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	51	0	-42	0	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAAGCAGCATGGTTGG	NA	False	NA	NA	False	NA	NA	NA	69629833	69624401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
tx.4473	chr12	-	1120	6	NIC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	-34	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	61.6071424430642	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTGAAGCAGCATGGTT	NA	False	NA	NA	False	NA	NA	NA	69629825	69624403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_69624715_69626607_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
tx.4474	chr12	-	5880	24	NNC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	-201	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_16	18.1698560064957	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCAATATTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	69728827	69630535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69674287_69674353_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
tx.4475	chr12	-	5928	23	FSM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	-325	-1091	-314	0	multi-exon	FALSE	canonical	3	44	junction_4	8.63397096042456	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCAATATTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	69728940	69630535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
tx.4476	chr12	-	3330	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	9	1	9	-1	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	510	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTGTTATGATCATAT	NA	False	NA	NA	False	NA	NA	NA	69771638	69737207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
tx.4477	chr12	-	3287	10	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_5	166.433689016095	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTGTTATGATCATAT	NA	False	NA	NA	False	NA	NA	NA	69771637	69737207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753939_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
tx.4478	chr12	-	4656	9	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	7	-1	intron_retention	FALSE	canonical	3	442	junction_4	59.9404652551179	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTGTTATGATCATAT	NA	False	NA	NA	False	NA	NA	NA	69771640	69737207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
tx.4479	chr12	-	3131	8	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	181.049998731887	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGGTGTTATGATCATA	NA	False	NA	NA	False	NA	NA	NA	69771638	69737208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69759395_69759528_69768085_69768238_69768851_69768968_69771427
tx.448	chr1	+	1506	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	6	1364	-2	0	multi-exon	FALSE	canonical	3	167	junction_4	30.7265756142723	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	NA	False	NA	NA	NA	75187487	75190886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
tx.4480	chr12	+	1598	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	-1	2	-1	0	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTAGTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	69771722	69791432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
tx.4481	chr12	+	1499	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	-9	-5	3	3	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTAGTCTTTACTTTCT	NA	False	NA	NA	False	NA	NA	NA	69771726	69791437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
tx.4482	chr12	+	2037	5	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	3	1	intron_retention	FALSE	canonical	3	110	junction_1	42.1270400099509	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTAGTCTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	69771726	69791435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
tx.4483	chr12	-	4408	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAGTATTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	69939894	69850530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
tx.4484	chr12	+	2955	14	NIC	ENSMUSG00000021066.10	novel	5150	15	NA	NA	-192	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	5.77179430224741	9	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	8782	False	NA	NA	False	NA	NA	NA	69939686	70010803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
tx.4485	chr12	-	2614	5	FSM	ENSMUSG00000021067.9	ENSMUST00000021467.8	2524	5	-90	0	-90	0	multi-exon	FALSE	canonical	3	134	junction_4	6.57171971404746	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTCCTTGAATGCA	NA	False	NA	NA	False	NA	NA	NA	70033866	70011785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033447
tx.4486	chr12	-	2318	4	NIC	ENSMUSG00000021067.9	novel	2524	5	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	65.576079649688	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTCCTTGAATGCA	NA	False	NA	NA	False	NA	NA	NA	70033841	70011785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_70013122_70015843_70015988_70030982_70031427_70033447
tx.4487	chr12	-	4615	28	NIC	ENSMUSG00000021068.18	novel	7183	30	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_27	9.24799314603341	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	70158773	70065512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158627
tx.4488	chr12	-	4688	29	NIC	ENSMUSG00000021068.18	novel	6708	30	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_28	8.80949163443288	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGTCTTCTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	70158800	70065513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
tx.4489	chr12	-	5046	29	NIC	ENSMUSG00000021068.18	novel	7183	30	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_27	9.95365536383699	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	70158820	70065512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_70066037_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70157845_70158257_70158627
tx.449	chr1	+	1779	6	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	10	9	intron_retention	FALSE	canonical	3	176	junction_1	28.1666469427939	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAATGTGTCTGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	75187501	75190895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189873_75190219_75190342_75190457
tx.4491	chr12	-	2809	20	FSM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	12	4	12	-4	multi-exon	FALSE	canonical	2	8	junction_17	3.93154724147013	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGCTTGGATTCCT	6212	False	NA	NA	False	NA	NA	NA	70274445	70237588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
tx.4492	chr12	+	2351	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	28	416	28	-416	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	510	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTTGAAGAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	70499896	70514398	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
tx.4493	chr12	+	4725	14	FSM	ENSMUSG00000048285.10	ENSMUST00000057859.9	4662	14	-63	0	-63	0	multi-exon	FALSE	canonical	0	0	junction_12	41.9310507589719	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	724	False	NA	NA	False	NA	NA	NA	70872224	70949008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
tx.4494	chr12	+	4370	13	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-68	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	46.5453780973173	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	719	False	NA	NA	False	NA	NA	NA	70872219	70949008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70941650_70941783_70944115_70944208_70946157
tx.4495	chr12	+	4695	14	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6862522431374	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	730	False	NA	NA	False	NA	NA	NA	70872230	70949008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
tx.4496	chr12	+	5032	14	NIC	ENSMUSG00000048285.10	novel	2721	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	44.4026759681902	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	953	False	NA	NA	False	NA	NA	NA	70872453	70949008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_70872908_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
tx.4497	chr12	+	1476	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	31	2515	-27	142	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGTCGTAT	9676	False	NA	NA	False	NA	NA	NA	70984661	71008977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
tx.4498	chr12	+	973	7	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	15092	2434	-1375	223	3prime_fragment	FALSE	canonical	3	325	junction_3	18.9707377001763	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTAGTTTATTATG	2186	False	NA	NA	False	NA	NA	NA	70999722	71009058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
tx.4499	chr12	+	943	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	63	1840	1	2	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	1130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGTAATTGAAGCTAT	4783	False	NA	NA	False	NA	NA	NA	71021457	71041281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
tx.45	chr1	-	2407	3	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	5.5	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTCTTTGGATTTTA	NA	False	NA	NA	False	NA	NA	NA	11465741	11454292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_11456468_11457012_11457110_11465606
tx.450	chr1	-	2878	2	ISM	ENSMUSG00000026202.14	ENSMUST00000079464.13	2083	4	539	3	539	-3	intron_retention	FALSE	canonical	3	253	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTGTGCTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75194729	75191618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_75193238_75193470
tx.4500	chr12	+	4996	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	2	0	2	0	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGTTAATTCACTCTT	3383	False	NA	NA	False	NA	NA	NA	71062765	71145366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
tx.4501	chr12	+	5138	19	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	20957	-475	-11394	475	3prime_fragment	FALSE	canonical	3	82	junction_2	14.9150888882101	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCTCCTTTTCTGTGTT	8742	False	NA	NA	False	NA	NA	NA	71083720	71145841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
tx.4502	chr12	+	2593	5	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	59035	3	26684	-3	3prime_fragment	FALSE	canonical	3	83	junction_1	23.7631542519086	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCTAGGTTAATTCACT	NA	False	NA	NA	False	NA	NA	NA	71121798	71145363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
tx.4503	chr12	-	5356	4	ISM	ENSMUSG00000021079.17	ENSMUST00000166120.9	990	6	-32	-2	4	1	intron_retention	FALSE	canonical	3	171	junction_3	59.2339992459286	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	NA	False	NA	NA	NA	71183454	71169945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774
tx.4504	chr12	-	878	5	FSM	ENSMUSG00000021079.17	ENSMUST00000221559.2	718	5	-36	-124	3	1	multi-exon	FALSE	canonical	3	163	junction_4	64.161417534216	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	NA	False	NA	NA	NA	71183444	71169945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71183328
tx.4505	chr12	-	794	4	FSM	ENSMUSG00000021079.17	ENSMUST00000021486.10	794	4	1	-1	1	1	multi-exon	FALSE	canonical	3	89	junction_3	97.112763779479	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	NA	False	NA	NA	NA	71183446	71169945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71183328
tx.4506	chr12	+	5165	28	FSM	ENSMUSG00000034601.18	ENSMUST00000045907.16	4507	28	-662	4	330	-4	multi-exon	FALSE	canonical	3	73	junction_27	19.0025628189986	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	71183951	71290073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
tx.4507	chr12	+	5429	30	FSM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	330	4	330	-4	multi-exon	FALSE	canonical	3	69	junction_27	23.3199327353747	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	71183951	71290073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
tx.4508	chr12	+	3728	4	FSM	ENSMUSG00000044548.12	ENSMUST00000061273.12	3650	4	-90	12	-90	-12	multi-exon	FALSE	canonical	3	14	junction_3	6.97614984548545	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGCTGGCTGTTGGTG	1123	False	NA	NA	False	NA	NA	NA	71356567	71366869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363944
tx.4509	chr12	+	3840	4	FSM	ENSMUSG00000044548.12	ENSMUST00000150639.2	2448	4	-191	-1201	-91	-12	multi-exon	FALSE	canonical	2	11	junction_3	8.28653526310404	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGCTGGCTGTTGGTG	1122	False	NA	NA	False	NA	NA	NA	71356566	71366869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363833
tx.451	chr1	-	2051	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	41	748	-10	-4	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTTTGTGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	75195897	75191619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
tx.4510	chr12	+	5810	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	122	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCTGTTTTCTATGCA	1798	False	NA	NA	False	NA	NA	NA	71877846	72039104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
tx.4511	chr12	+	5929	25	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	21.2589441961103	83	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTTTTCTATGCATT	1816	False	NA	NA	False	NA	NA	NA	71877864	72039106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
tx.4512	chr12	-	1748	5	FSM	ENSMUSG00000019718.9	ENSMUST00000019862.3	1831	5	23	60	23	-60	multi-exon	FALSE	canonical	3	12	junction_4	3.20156211871642	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATAGAGGTGGGTTAT	NA	False	NA	NA	False	NA	NA	NA	72132190	72120261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_72120811_72123917_72124056_72124137_72124261_72126260_72126431_72131422
tx.4513	chr12	+	1837	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	34	3	34	-3	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCCATGTTCTGATAAT	NA	False	NA	NA	False	NA	NA	NA	72132664	72148232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
tx.4514	chr12	+	1833	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	59	-600	59	0	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	224	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	NA	False	NA	NA	NA	72132689	72148235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
tx.4515	chr12	+	4399	6	NIC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	30	6	intron_retention	FALSE	canonical	3	527	junction_2	75.3567515223421	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	72132660	72147641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
tx.4516	chr12	-	1521	7	FSM	ENSMUSG00000021087.19	ENSMUST00000021497.16	1544	7	24	-1	-14	0	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTCTCTCTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	72283474	72258525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
tx.4517	chr12	+	4437	25	NIC	ENSMUSG00000021090.17	novel	2520	16	NA	NA	122	826	intron_retention	FALSE	canonical	1	1	junction_18	3.60531051213192	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTATGTCTTTGTCATT	NA	False	NA	NA	False	NA	NA	NA	72489144	72544839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_72489245_72496093_72496175_72496421_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510609_72510725_72513631_72513765_72515942_72516066_72516996_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822
tx.4518	chr12	+	1043	2	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	-29	37888	-29	-37888	5prime_fragment	FALSE	canonical	3	96	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGGGAGAGTTAGGTTA	NA	False	NA	NA	False	NA	NA	NA	72583127	72589005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_72583314_72588148
tx.4519	chr12	+	4325	11	FSM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	-25	0	-25	0	multi-exon	FALSE	canonical	2	9	junction_2	24.633513756669	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTTTGTGTTTAGA	NA	False	NA	NA	False	NA	NA	NA	72583131	72626893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
tx.452	chr1	-	3809	3	ISM	ENSMUSG00000026202.14	ENSMUST00000079464.13	2083	4	-627	2	-8	-2	intron_retention	FALSE	canonical	3	248	junction_2	2.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTGCTTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	75195895	75191617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_75193238_75193470_75193620_75193855
tx.4520	chr12	+	3475	8	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-7	-11372	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	29.3097462372126	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTTCCCTAATTT	NA	False	NA	NA	False	NA	NA	NA	72583149	72615521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72614233
tx.4521	chr12	-	1277	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	107	1	4	-1	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGACTGCAGACTTAG	NA	False	NA	NA	False	NA	NA	NA	72711576	72697127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
tx.4522	chr12	+	2742	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	43	4883	43	372	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	388	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTAGCTGTTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	72808027	72841710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
tx.4523	chr12	+	4036	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-59	-77	45	77	multi-exon	FALSE	canonical	3	365	junction_1	26.5	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGATCCTTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	72808029	72836251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_72808406_72830456_72831311_72833445
tx.4524	chr12	+	2924	7	NNC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	49	376	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	169.394673929128	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTGTTGGCCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	72808033	72841714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72839727_72839912_72840485
tx.4525	chr12	+	2189	5	ISM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	22651	4879	159	376	3prime_fragment	FALSE	canonical	3	299	junction_2	42.9498253779919	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTGTTGGCCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	72830635	72841714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
tx.4526	chr12	-	2716	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	467	133	467	-133	multi-exon	FALSE	canonical	3	15	junction_1	0	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTGGCTTGCTCATGC	9062	False	NA	NA	False	NA	NA	NA	73093486	73088733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_73090604_73092640
tx.4527	chr12	-	6243	3	FSM	ENSMUSG00000034460.10	ENSMUST00000043208.8	6402	3	159	0	159	0	multi-exon	FALSE	canonical	3	64	junction_1	15	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGTTGAAGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	73160040	73146382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_73151013_73155434_73156124_73159116
tx.4528	chr12	-	6204	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGTGTTGAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	73160208	73146383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
tx.4529	chr12	-	4999	2	ISM	ENSMUSG00000034460.10	ENSMUST00000043208.8	6402	3	4396	0	4396	0	3prime_fragment	FALSE	canonical	3	64	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGTTGAAGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	73155803	73146382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_73151013_73155434
tx.453	chr1	+	1866	10	FSM	ENSMUSG00000026203.17	ENSMUST00000188346.7	1823	10	-43	0	20	0	multi-exon	FALSE	canonical	1	4	junction_1	13.4669233565562	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGGCCTGTGTTCCTC	2198	False	NA	NA	False	NA	NA	NA	75213069	75222336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75213182_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
tx.4530	chr12	-	2039	4	ISM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	1432	3	1432	-3	3prime_fragment	FALSE	canonical	3	66	junction_2	19.4307888557196	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTTGTAATTCAAGGTA	NA	False	NA	NA	False	NA	NA	NA	73332051	73326787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408
tx.4531	chr12	-	2080	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-23	9	-22	-9	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAGGATTTTGTAATTC	NA	False	NA	NA	False	NA	NA	NA	73333506	73326793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
tx.4532	chr12	-	2450	5	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	9	83	intron_retention	FALSE	canonical	3	14	junction_4	37.6056844107377	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATATTGTATAGACTG	NA	False	NA	NA	False	NA	NA	NA	73333474	73327171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73332677
tx.4533	chr12	+	2969	16	FSM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	59	4	-19	-4	multi-exon	FALSE	canonical	2	3	junction_10	3.76769897358528	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTATGCTGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	73333611	73400819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
tx.4534	chr12	+	3711	14	FSM	ENSMUSG00000021108.19	ENSMUST00000021527.15	3545	14	-171	5	-170	4	multi-exon	FALSE	canonical	1	3	junction_1	3.36532966988113	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATTTTGTGAGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	73631399	73824954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_73632300_73696065_73696130_73738321_73738473_73739705_73739741_73742960_73743050_73744690_73744821_73746954_73747083_73749211_73749356_73749512_73749687_73768509_73768665_73805659_73805799_73806326_73806516_73822163_73822308_73823685
tx.4535	chr12	+	4280	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	82	362	82	-362	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	458	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGGAGTAAGTGAAACA	8440	False	NA	NA	False	NA	NA	NA	73954759	73993942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
tx.4536	chr12	+	4223	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	85	-374	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGCAGTATGAATGGA	8443	False	NA	NA	False	NA	NA	NA	73954762	73993930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
tx.4537	chr12	+	3882	11	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	22752	0	4054	0	3prime_fragment	FALSE	canonical	3	312	junction_6	60.4537012928075	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	NA	False	NA	NA	False	NA	NA	NA	73977429	73994304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
tx.4538	chr12	+	2819	9	NNC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	8	283	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	27.4018133524043	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTAGTGTGTGAAATT	NA	False	NA	NA	False	NA	NA	NA	74011307	74031164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029406
tx.4539	chr12	+	6210	9	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	28.297250308113	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	74011253	74035734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
tx.454	chr1	+	1912	10	FSM	ENSMUSG00000026203.17	ENSMUST00000188290.7	1855	10	-57	0	24	0	multi-exon	FALSE	canonical	3	30	junction_9	6.24400947476761	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTGGCCTGTGTTCC	2202	False	NA	NA	False	NA	NA	NA	75213073	75222334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
tx.4540	chr12	+	1726	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-26	4575	19	284	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTAGTGTGTGAAATTT	NA	False	NA	NA	False	NA	NA	NA	74011273	74031165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
tx.4541	chr12	-	4816	14	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-8	-15	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	50.8484230844725	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAACCCCTGAATGTGA	NA	False	NA	NA	False	NA	NA	NA	75643010	75497669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_75500588_75506476_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
tx.4542	chr12	-	4818	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-46	38	-1	-38	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	276	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGAAAATAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	75643020	75497692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
tx.4543	chr12	-	1390	3	FSM	ENSMUSG00000021051.11	ENSMUST00000218930.2	1382	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	165	junction_2	10	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTCTCTTTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	75643010	75561948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_75562573_75639942_75640107_75642408
tx.4544	chr12	-	2980	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	1	-2	1	2	multi-exon	FALSE	canonical	3	148	junction_1	0	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGTATCTTGTCTTAT	6411	False	NA	NA	False	NA	NA	NA	75716310	75677367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_75680283_75716245
tx.4545	chr12	-	3273	3	FSM	ENSMUSG00000021054.7	ENSMUST00000021450.6	3323	3	34	16	1	-16	multi-exon	FALSE	canonical	3	57	junction_1	0.5	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTTCTTCTTTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	75782469	75761038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_75763439_75769425_75769516_75781686
tx.4546	chr12	+	5330	2	Antisense	novelGene_ENSMUSG00000021056.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	76269310	76276098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr12_+_76272810_76274267
tx.4547	chr12	+	3157	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	84	0	-31	0	multi-exon	TRUE	canonical	3	837	junction_20	135.484134190258	2322	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	7995	False	NA	NA	False	NA	NA	NA	76302155	76366577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
tx.4548	chr12	-	3417	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	-38	-1707	-38	544	multi-exon	FALSE	canonical	3	78	junction_2	3	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76416414	76394011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_76397048_76402662_76402843_76416213
tx.4549	chr12	+	3811	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	171	8208	171	-8208	multi-exon	FALSE	canonical	3	110	junction_1	0	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATGCTTTTTAATGTGA	NA	False	NA	NA	False	NA	NA	NA	76417210	76435516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_76417505_76431999
tx.455	chr1	+	3034	9	FSM	ENSMUSG00000026203.17	ENSMUST00000188931.7	3066	9	36	-4	-23	0	multi-exon	FALSE	canonical	3	35	junction_1	4.89738450603993	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGGCCTGTGTTCCTC	2214	False	NA	NA	False	NA	NA	NA	75213085	75222336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101
tx.4550	chr12	+	3677	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	819	-8208	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATGCTTTTTAATGTGA	239	False	NA	NA	False	NA	NA	NA	76417858	76435516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_76418019_76431999
tx.4551	chr12	+	3603	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	5	-2753	5	77	multi-exon	FALSE	canonical	3	44	junction_1	0	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGTATAATAGTGCT	NA	False	NA	NA	False	NA	NA	NA	76491275	76498187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_76491440_76494748
tx.4552	chr12	+	4982	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	13.5993079408692	49	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	7200	False	NA	NA	False	NA	NA	NA	76580309	76625816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
tx.4553	chr12	+	4955	17	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	18.545552027373	35	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	7220	False	NA	NA	False	NA	NA	NA	76580329	76625816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624448
tx.4554	chr12	+	3149	4	ISM	ENSMUSG00000052609.10	ENSMUST00000218427.2	4815	6	949	1446	949	0	3prime_fragment	FALSE	canonical	3	68	junction_1	2.62466929133727	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	76619272	76625816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_76619520_76620020_76620135_76622630_76624051_76624448
tx.4555	chr12	+	2658	2	ISM	ENSMUSG00000052609.10	ENSMUST00000218427.2	4815	6	4437	1446	4437	0	3prime_fragment	FALSE	canonical	3	69	junction_1	0	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	76622760	76625816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_76624051_76624448
tx.4556	chr12	-	4985	17	ISM	ENSMUSG00000021061.16	ENSMUST00000021458.13	10394	36	97379	15642	-29082	0	internal_fragment	FALSE	canonical	3	10	junction_14	4.63301670081169	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTCTCTGGGGGAGGAA	8760	False	NA	NA	False	NA	NA	NA	76659942	76642903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_76644576_76645058_76645109_76645367_76645565_76646598_76646684_76647096_76647236_76648633_76648879_76650162_76650538_76650795_76651001_76652262_76652394_76653019_76653299_76654755_76654846_76655264_76655472_76655814_76656079_76657517_76657665_76658586_76658678_76658769_76658973_76659337
tx.4557	chr12	-	6917	32	ISM	ENSMUSG00000021061.16	ENSMUST00000021458.13	10394	36	405	16928	-119	-1286	5prime_fragment	FALSE	canonical	2	6	junction_26	5.26211994803944	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGGGGAAACACTTTAC	NA	False	NA	NA	False	NA	NA	NA	76756916	76644189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_76644576_76645058_76645109_76645367_76645565_76646598_76646684_76647096_76647236_76648633_76648879_76650162_76650538_76650795_76651001_76652262_76652394_76653019_76653299_76654755_76654846_76655264_76655472_76655814_76656079_76657517_76657665_76658586_76658678_76658769_76658973_76659337_76660095_76665812_76665951_76667429_76668301_76668916_76669068_76669682_76669986_76671000_76671160_76671769_76671888_76673721_76673910_76674655_76674769_76675249_76675366_76675668_76675750_76676386_76676479_76677358_76677533_76679153_76679306_76696550_76696753_76756708
tx.4558	chr12	+	615	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	12	49	-5	12	multi-exon	FALSE	canonical	3	492	junction_2	1.88561808316413	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAAATAGC	NA	False	NA	NA	False	NA	NA	NA	76812323	76829905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
tx.4559	chr12	-	993	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	19	-2	17	-2	multi-exon	FALSE	canonical	3	177	junction_1	0	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGTCTCTGTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	76842254	76839108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_76839775_76841927
tx.456	chr1	+	1964	11	NNC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	13.7873130087048	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGGCCTGTGTTCCTC	2180	False	NA	NA	False	NA	NA	NA	75213051	75222336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221206_75221235_75221437
tx.4560	chr12	-	3213	7	FSM	ENSMUSG00000021062.16	ENSMUST00000021459.14	3158	7	-57	2	-57	-2	multi-exon	FALSE	canonical	3	60	junction_1	4.01732359773132	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGTCTGTATG	NA	False	NA	NA	False	NA	NA	NA	76869384	76844735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
tx.4561	chr12	+	2599	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	14	0	-5	0	multi-exon	FALSE	canonical	3	246	junction_4	27.7548298231568	418	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	76884201	76968186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
tx.4562	chr12	+	1911	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7310	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	31	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	76948949	76968186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
tx.4563	chr12	-	1941	4	FSM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	-13	-2	-13	2	multi-exon	FALSE	canonical	3	49	junction_1	8.28653526310404	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	77008988	76984045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008763
tx.4564	chr12	-	2018	5	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5714979643834	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	77008980	76984045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008763
tx.4565	chr12	+	2960	12	FSM	ENSMUSG00000021065.17	ENSMUST00000171770.10	2765	12	-91	-104	-68	1	multi-exon	FALSE	canonical	3	35	junction_1	20.7412233753807	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGTGAAGTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	77284830	77522760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
tx.4566	chr12	+	3189	11	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-23	2	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	26.8158535198863	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGAAGTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	77285563	77522761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
tx.4567	chr12	+	3269	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-263	352	-11	1	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGTGAAGTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	77285575	77522760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
tx.4568	chr12	+	2122	5	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	-233	69669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.59522876548166	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCACGCATTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	77599887	77686152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_77600570_77616271_77616542_77678208_77678361_77684209_77684294_77685218
tx.4569	chr12	+	3373	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	-68	-5	-68	0	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGCGGCCTTGTTA	NA	False	NA	NA	False	NA	NA	NA	78273358	78731546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
tx.457	chr1	+	2150	9	FSM	ENSMUSG00000026203.17	ENSMUST00000082158.13	1253	9	-6	-891	-6	3	multi-exon	FALSE	canonical	3	30	junction_8	6.09815545882523	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCCTGTGTTCCTCCTT	2231	False	NA	NA	False	NA	NA	NA	75213102	75222339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
tx.4570	chr12	+	5059	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-26	4	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	32.7592485772635	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGACACTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	78795654	78887364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_78795720_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
tx.4571	chr12	+	5293	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCACTGGACACTTTCT	NA	False	NA	NA	False	NA	NA	NA	78795654	78887361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
tx.4572	chr12	+	5399	15	FSM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	-58	129	8	-1	multi-exon	FALSE	canonical	3	22	junction_1	32.6002378856977	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCACTGGACACTTT	NA	False	NA	NA	False	NA	NA	NA	78795707	78887359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_78795881_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
tx.4573	chr12	+	5148	15	NIC	ENSMUSG00000021112.10	novel	5470	15	NA	NA	25	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	41.9492526264577	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACTGGACACTTTCTT	NA	False	NA	NA	False	NA	NA	NA	78795724	78887362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_78795881_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
tx.4574	chr12	-	1325	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	85	2257	-58	20	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	665	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTCTTTTTCTTTTT	54	False	NA	NA	False	NA	NA	NA	78908327	78889755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
tx.4575	chr12	+	1490	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	226	1689	-40	-1689	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	2635	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGCTTCTTCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	78908818	78932095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
tx.4576	chr12	-	1599	9	FSM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	-18	2	-18	-2	multi-exon	FALSE	canonical	3	37	junction_6	8.60868021243675	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTATGGTTCTTGTAGT	NA	False	NA	NA	False	NA	NA	NA	78953756	78935466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
tx.4577	chr12	-	3899	3	NIC	ENSMUSG00000046157.14	novel	3860	3	NA	NA	31	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	1.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTGTGACCCATCTGT	NA	False	NA	NA	False	NA	NA	NA	79054083	79008569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_79011951_79024534_79024716_79053746
tx.4578	chr12	-	3886	3	FSM	ENSMUSG00000046157.14	ENSMUST00000056660.13	3860	3	-22	-4	-22	-1	multi-exon	FALSE	canonical	3	11	junction_2	2.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTGTGACCCATCTGT	NA	False	NA	NA	False	NA	NA	NA	79054073	79008569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_79011948_79024534_79024716_79053746
tx.4579	chr12	-	3734	3	NIC	ENSMUSG00000046157.14	novel	3621	3	NA	NA	139	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	3	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCTGTGACCCATCTG	NA	False	NA	NA	False	NA	NA	NA	79054262	79008570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_79011948_79024534_79024716_79054086
tx.458	chr1	-	1603	15	FSM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	-32	0	16	0	multi-exon	FALSE	canonical	3	252	junction_14	185.094639334056	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	75293621	75285208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
tx.4580	chr12	+	6422	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	11	6	11	1	multi-exon	TRUE	canonical	3	125	junction_6	14.4205688557161	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAACTGTGTGTTGTGGA	6136	False	NA	NA	False	NA	NA	NA	79075947	79128423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
tx.4581	chr12	-	2337	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	-3	5	-3	-5	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTATGGACTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	79136428	79127442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
tx.4582	chr12	+	1390	8	FSM	ENSMUSG00000021125.7	ENSMUST00000021550.7	1428	8	33	5	33	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.728431359084683	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTGGTCTTGTTGCTG	9121	False	NA	NA	False	NA	NA	NA	79177583	79203070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_79177755_79178614_79178688_79194361_79194540_79196642_79196803_79197505_79197601_79197726_79197832_79198695_79198833_79202599
tx.4583	chr12	-	1048	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	201	241	-18	71	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	248	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACATGTATAACATTAAT	NA	False	NA	NA	False	NA	NA	NA	79219240	79203031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
tx.4584	chr12	-	2850	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	414	-2	-86	2	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGGGGATATTGGAAA	NA	False	NA	NA	False	NA	NA	NA	79238653	79221108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
tx.4585	chr12	+	1717	7	FSM	ENSMUSG00000021123.13	ENSMUST00000021548.12	1678	7	-40	1	-40	0	multi-exon	FALSE	canonical	2	3	junction_5	2.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGGTGTCTTTTCTCA	335	False	NA	NA	False	NA	NA	NA	79255647	79269438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_79255883_79257614_79257734_79258161_79258318_79259426_79259532_79260317_79260528_79265449_79265640_79268736
tx.4586	chr12	-	9368	42	FSM	ENSMUSG00000066440.6	ENSMUST00000021547.8	9391	42	23	0	1	0	multi-exon	TRUE	canonical	3	23	junction_36	10.4802014412253	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTAGCTTCATCAGCTT	NA	False	NA	NA	False	NA	NA	NA	79343055	79279119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320066_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
tx.4587	chr12	-	2242	3	FSM	ENSMUSG00000066440.6	ENSMUST00000219571.2	824	3	-8	-1410	-4	27	multi-exon	FALSE	canonical	3	37	junction_2	9.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAGAGAATACCAAAAGC	NA	False	NA	NA	False	NA	NA	NA	79343060	79338793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_79340679_79342250_79342547_79342999
tx.4588	chr12	+	843	7	ISM	ENSMUSG00000059060.16	ENSMUST00000079533.12	1759	8	-30	181250	-30	-181250	5prime_fragment	FALSE	canonical	3	33	junction_1	14.6021307425397	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCCCTTTTCCTTCTT	8683	False	NA	NA	False	NA	NA	NA	79344094	79374180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_79344158_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994
tx.4589	chr12	+	882	7	NNC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	-30	-181250	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	21.6365174852352	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCCCTTTTCCTTCTT	8683	False	NA	NA	False	NA	NA	NA	79344094	79374180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_79344197_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994
tx.459	chr1	-	1718	14	FSM	ENSMUSG00000026209.16	ENSMUST00000187836.7	1862	14	144	0	-12	0	multi-exon	FALSE	canonical	3	848	junction_13	52.2384156632446	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	75293649	75285208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353
tx.4590	chr12	+	2253	2	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	80057319	80062765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_80057457_80060649
tx.4591	chr12	-	2989	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	1	0	1	0	multi-exon	FALSE	canonical	3	257	junction_1	0	381	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTCTATAGGTTTTT	9168	False	NA	NA	False	NA	NA	NA	80159786	80154527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_80157323_80159592
tx.4592	chr12	-	3750	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	-15	-1	-15	1	multi-exon	TRUE	canonical	3	154	junction_2	44.8659113358906	319	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTTTGCTTGTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	80307160	80214319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
tx.4593	chr12	-	3734	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-295	-775	-15	0	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTTGCTTGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	80307160	80214320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
tx.4594	chr12	-	5701	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	3	2	3	-2	multi-exon	FALSE	canonical	3	23	junction_5	6.59071316323203	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGCCTTCCTCCTCT	NA	False	NA	NA	False	NA	NA	NA	80483372	80382623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
tx.4595	chr12	-	5378	9	NIC	ENSMUSG00000049106.8	novel	5706	9	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	3	junction_8	11.9993489406717	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGCCTTCCTCCTCT	NA	False	NA	NA	False	NA	NA	NA	80483228	80382623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80483137
tx.4596	chr12	+	3190	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	120	0	-5	0	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2783	False	NA	NA	False	NA	NA	NA	80509988	80544896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
tx.4597	chr12	+	4277	2	FSM	ENSMUSG00000032705.10	ENSMUST00000219757.2	5245	2	-1137	2105	409	0	multi-exon	FALSE	canonical	3	232	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	NA	False	NA	NA	False	NA	NA	NA	80536737	80544896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80539673_80543554
tx.4598	chr12	+	3978	16	FSM	ENSMUSG00000021130.9	ENSMUST00000219993.2	4222	16	246	-2	246	2	multi-exon	FALSE	canonical	2	6	junction_1	5.44630353746669	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGCTGATGCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	80565296	80650668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80565423_80565829_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
tx.4599	chr12	+	3922	15	FSM	ENSMUSG00000021130.9	ENSMUST00000021558.8	3922	15	-4	4	-4	2	multi-exon	FALSE	canonical	2	15	junction_3	4.40141442942968	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGCTGATGCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	80565759	80650668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
tx.46	chr1	+	6815	7	FSM	ENSMUSG00000057715.14	ENSMUST00000135014.8	6451	7	-164	-200	0	10	multi-exon	FALSE	canonical	3	15	junction_4	4.57043640026736	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGTTATATGTATGTT	NA	False	NA	NA	False	NA	NA	NA	11484328	11672045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374
tx.460	chr1	-	1819	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	0	669	0	0	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	75294281	75285208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
tx.4600	chr12	-	789	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	496	8	3	-8	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	2110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGAGTGGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	80690619	80680803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
tx.4601	chr12	+	5229	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-30	2	-17	-2	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTATGTGAGTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	80690982	80730109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
tx.4602	chr12	+	4658	7	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.9864840178139	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTATGTGAGTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	80690993	80730109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_80691191_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
tx.4603	chr12	+	3521	13	FSM	ENSMUSG00000066438.7	ENSMUST00000140770.2	3535	13	12	2	12	-2	multi-exon	FALSE	canonical	0	0	junction_2	3.32812092461931	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTACTGGTTTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	80739376	80770986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80739802_80752317_80752412_80752778_80752869_80753126_80753204_80753945_80754038_80754955_80755009_80763994_80764090_80765686_80765781_80767357_80767537_80767986_80768120_80768222_80768368_80768719_80768870_80769092
tx.4604	chr12	+	2276	2	FSM	ENSMUSG00000066438.7	ENSMUST00000153762.2	956	2	-16	-1304	-16	0	multi-exon	FALSE	canonical	3	14	junction_1	0	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTACTGGTTTCCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	80768489	80770988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80768870_80769092
tx.4605	chr12	+	4994	6	FSM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	-19	2	-19	-2	multi-exon	FALSE	canonical	3	47	junction_3	3.86781592116274	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAGATGTAGTCCTTC	3440	False	NA	NA	False	NA	NA	NA	80837313	80927607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80837590_80874799_80875018_80915200_80915399_80916848_80916985_80920922_80921351_80923869
tx.4606	chr12	+	4142	2	ISM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	83612	4	5463	-4	3prime_fragment	FALSE	canonical	3	58	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGAGATGTAGTCCT	NA	False	NA	NA	False	NA	NA	NA	80920944	80927605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_80921351_80923869
tx.4607	chr12	+	1494	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	29	4	1	0	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	952	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	80992306	80997277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
tx.4608	chr12	+	1620	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	-52	0	1	0	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	402	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	80992306	80997277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
tx.4609	chr12	+	3196	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7400	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2909728420852	91	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	81066181	81233187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
tx.461	chr1	+	2182	9	FSM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	-12	858	-12	-858	multi-exon	FALSE	canonical	2	4	junction_1	8.9154010005159	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCCTGTCATCTTGACT	NA	False	NA	NA	False	NA	NA	NA	75336960	75344365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75337637_75338801_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
tx.4610	chr12	+	3496	13	FSM	ENSMUSG00000021136.14	ENSMUST00000110347.9	3496	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	48.9003379901975	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	81073581	81233188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
tx.4611	chr12	+	3462	13	FSM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	-20	-3	0	-1	multi-exon	FALSE	canonical	3	56	junction_1	31.9699294476683	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	81073581	81233187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
tx.4612	chr12	+	2031	2	ISM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	157047	-2	157047	2	3prime_fragment	FALSE	canonical	3	175	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGGTGCCTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	81230648	81233186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_81230816_81231322
tx.4613	chr12	-	662	4	FSM	ENSMUSG00000091803.8	ENSMUST00000110340.9	668	4	7	-1	7	1	multi-exon	FALSE	canonical	3	188	junction_1	77.5127229699888	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTTCTCAGTGTTCCA	1005	False	NA	NA	False	NA	NA	NA	81531877	81405798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81531670
tx.4614	chr12	-	597	4	FSM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	21	1389	11	0	multi-exon	FALSE	canonical	3	142	junction_1	95.530099968544	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGCTTTTCAGTCT	1009	False	NA	NA	False	NA	NA	NA	81531873	81518866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81531670
tx.4615	chr12	-	3443	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	14	1198	2	3	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTGTTTCCTTTTC	NA	False	NA	NA	False	NA	NA	NA	81579671	81545912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
tx.4616	chr12	-	3279	3	FSM	ENSMUSG00000090935.11	ENSMUST00000164431.2	3305	3	16	10	-3	-10	multi-exon	FALSE	canonical	3	34	junction_2	56.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTTGCTTCAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	81579657	81545925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_81548941_81551317_81551414_81579489
tx.4617	chr12	-	2526	2	FSM	ENSMUSG00000002679.15	ENSMUST00000160739.2	487	2	-1903	-136	-1903	0	multi-exon	FALSE	canonical	3	460	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTTTCCCTTGTCTC	NA	False	NA	NA	False	NA	NA	NA	81623423	81620333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_81620735_81621298
tx.4618	chr12	-	1031	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	21	7	21	1	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCATGCCTTTCCCTTG	NA	False	NA	NA	False	NA	NA	NA	81641759	81620337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
tx.4619	chr12	+	4778	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-124	-2612	-4	-4	multi-exon	FALSE	canonical	3	20	junction_1	7	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTTCTATGTTGCT	NA	False	NA	NA	False	NA	NA	NA	81678018	81714327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_81678576_81707339_81707523_81710289
tx.462	chr1	+	1643	8	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	1692	858	-9	-858	3prime_fragment	FALSE	canonical	3	24	junction_7	3.01695886884898	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCCTGTCATCTTGACT	NA	False	NA	NA	False	NA	NA	NA	75338664	75344365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
tx.4620	chr12	-	4545	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	13	6	13	-6	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGGGTGCCGTGAGG	NA	False	NA	NA	False	NA	NA	NA	81827936	81767789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
tx.4621	chr12	+	8098	34	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-88	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	7.07392423202313	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTCTATGTGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	81906708	82043895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
tx.4622	chr12	+	8374	36	NIC	ENSMUSG00000021140.10	novel	8318	36	NA	NA	-52	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	10.8735214805396	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAGACTTGTCTATGTG	NA	False	NA	NA	False	NA	NA	NA	81906744	82043889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81975015_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
tx.4623	chr12	+	6325	29	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-244	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	7.09438913105682	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTATGTGGCTCTGTT	5982	False	NA	NA	False	NA	NA	NA	81965172	82043897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
tx.4624	chr12	+	6298	25	NIC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	32.3541331294095	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	82216155	82497048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
tx.4625	chr12	+	6219	24	NIC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	21.8092781282731	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	82216165	82497048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
tx.4626	chr12	+	6548	23	FSM	ENSMUSG00000042700.17	ENSMUST00000166429.9	8215	23	151	1516	95	-1	multi-exon	FALSE	canonical	3	101	junction_2	20.7113176231246	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGAATGTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	82216344	82497044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
tx.4627	chr12	+	7688	23	NNC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	255	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	35.4861164796871	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGGTTATTGCTCGGG	NA	False	NA	NA	False	NA	NA	NA	82217054	82498560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_82217185_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
tx.4628	chr12	+	5667	20	ISM	ENSMUSG00000042700.17	ENSMUST00000053969.7	7488	21	29565	1508	-1353	0	3prime_fragment	FALSE	canonical	3	117	junction_1	18.1124526729059	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	82387687	82497048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
tx.4629	chr12	+	3707	11	ISM	ENSMUSG00000042700.17	ENSMUST00000053969.7	7488	21	105553	8	-3713	-8	3prime_fragment	FALSE	canonical	3	131	junction_9	14.9	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTTAAAATGGATTGG	NA	False	NA	NA	False	NA	NA	NA	82463675	82498548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
tx.463	chr1	+	1508	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	32	-1	1	1	multi-exon	FALSE	canonical	3	122	junction_1	48.5514475124641	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	NA	False	NA	NA	NA	75412605	75419819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
tx.4630	chr12	+	1725	8	ISM	ENSMUSG00000042700.17	ENSMUST00000053969.7	7488	21	113753	1508	4487	0	3prime_fragment	FALSE	canonical	3	131	junction_6	16.8498773688991	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	82471875	82497048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
tx.4631	chr12	+	2015	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	67	-74	67	69	multi-exon	TRUE	canonical	3	216	junction_9	23.528907060372	276	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGTATGTACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	83567306	83588763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
tx.4632	chr12	+	1984	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-73	69	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	62.8602281575852	38	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGTATGTACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	83567334	83588763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
tx.4633	chr12	-	2975	11	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9278	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.7479031690748	31	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGTATGGATCATGAC	NA	False	NA	NA	False	NA	NA	NA	83653274	83593617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83653189
tx.4634	chr12	-	3884	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9262	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.1632538674499	51	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGTATGGATCATGAC	NA	False	NA	NA	False	NA	NA	NA	83653258	83593617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83653189
tx.4635	chr12	-	3106	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9285	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.7081346910826	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGTATGGATCATGAC	NA	False	NA	NA	False	NA	NA	NA	83653281	83593617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83651973_83652098_83653189
tx.4636	chr12	-	4035	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	4	-3	4	3	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATCGTATGGATCATG	NA	False	NA	NA	False	NA	NA	NA	83643992	83593619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
tx.4637	chr12	+	4364	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	158.146798805095	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTAGTGCATATAC	3962	False	NA	NA	False	NA	NA	NA	83679006	83729898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
tx.4638	chr12	+	4238	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	-12	0	-12	0	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3969	False	NA	NA	False	NA	NA	NA	83679013	83729897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
tx.4639	chr12	+	4301	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	144.182728784617	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTAGTGCATATAC	3971	False	NA	NA	False	NA	NA	NA	83679015	83729898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
tx.464	chr1	+	1795	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	1	intron_retention	FALSE	canonical	3	82	junction_1	58.385869199852	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	NA	False	NA	NA	NA	75412619	75419819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
tx.4640	chr12	+	4299	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_10	142.341791458334	45	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTAGTGCATATAC	3971	False	NA	NA	False	NA	NA	NA	83679015	83729898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
tx.4641	chr12	+	4375	21	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	-42	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	164.86857644803	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGCTTTCTTTGAGTCT	3972	False	NA	NA	False	NA	NA	NA	83679016	83729855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
tx.4642	chr12	+	7546	18	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-19	1	intron_retention	FALSE	canonical	3	212	junction_1	99.1063180818308	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTAGTGCATATAC	3962	False	NA	NA	False	NA	NA	NA	83679006	83729898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
tx.4643	chr12	+	4375	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	165.091270211359	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTGTGTAGTGCATAT	3957	False	NA	NA	False	NA	NA	NA	83679001	83729896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
tx.4644	chr12	+	5643	10	ISM	ENSMUSG00000010608.16	ENSMUST00000182450.8	2994	18	18878	-1103	-1459	0	3prime_fragment	FALSE	canonical	3	445	junction_1	62.3047072315558	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	NA	False	NA	NA	False	NA	NA	NA	83708290	83729897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
tx.4645	chr12	+	6076	9	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	-1514	-2	intron_retention	FALSE	canonical	3	445	junction_1	60.7901102153961	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTGTGTAGTGCATA	NA	False	NA	NA	False	NA	NA	NA	83708235	83729895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
tx.4646	chr12	+	2900	9	ISM	ENSMUSG00000010608.16	ENSMUST00000182450.8	2994	18	25455	-1105	5118	2	3prime_fragment	FALSE	canonical	3	467	junction_5	56.5663327430725	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	NA	False	NA	NA	False	NA	NA	NA	83714867	83729899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
tx.4647	chr12	+	2675	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	15	0	-5	0	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	468	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTCTGTCCTGGCTGG	3360	False	NA	NA	False	NA	NA	NA	83734940	83781869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
tx.4648	chr12	-	3698	13	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	24.4108354811729	54	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTATAGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	83968681	83840811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
tx.4649	chr12	-	3460	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-14	-5	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	27.6550176279098	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGGGTTTATAGTTCT	NA	False	NA	NA	False	NA	NA	NA	83968678	83840814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
tx.465	chr1	+	1697	14	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	5	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	88.7478310427522	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTGGACTCCTACTTGC	NA	False	NA	NA	False	NA	NA	NA	75412616	75419821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_75412656_75412758_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
tx.4650	chr12	-	3609	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	103	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTTTATAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	83968678	83840812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
tx.4651	chr12	-	3579	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	26.5375206076227	47	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	83968678	83840809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
tx.4652	chr12	+	2363	3	FSM	ENSMUSG00000021226.8	ENSMUST00000021649.8	2196	3	-163	-4	-163	4	multi-exon	FALSE	canonical	3	74	junction_2	1.5	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTGTCCTTCCTTCAA	NA	False	NA	NA	False	NA	NA	NA	84034471	84040651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84035256_84037267_84037471_84039275
tx.4653	chr12	+	1288	3	NIC	ENSMUSG00000072949.7	novel	2272	3	NA	NA	-3	11	combination_of_known_junctions	FALSE	canonical	2	16	junction_2	57	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTGTGTCCTTCAATC	2816	False	NA	NA	False	NA	NA	NA	84056260	84064459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_84056741_84061152_84061356_84063854
tx.4654	chr12	+	1587	3	FSM	ENSMUSG00000072949.7	ENSMUST00000168120.3	2272	3	0	685	0	12	multi-exon	FALSE	canonical	3	130	junction_1	2	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTGTCCTTCAATCT	2819	False	NA	NA	False	NA	NA	NA	84056263	84064460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84056741_84061152_84061356_84063553
tx.4655	chr12	+	2475	3	ISM	ENSMUSG00000021228.16	ENSMUST00000021653.8	3431	4	1496	5	551	-5	3prime_fragment	FALSE	canonical	2	7	junction_1	2	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGTCTTGTTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	84100420	84107171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_84100716_84103682_84103886_84105194
tx.4656	chr12	-	6531	12	ISM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	19810	-110	-14067	8	3prime_fragment	TRUE	canonical	3	72	junction_9	15.4111690741295	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAATACCACAT	5215	False	NA	NA	False	NA	NA	NA	84220979	84195941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527
tx.4657	chr12	-	7339	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	-73	-110	-73	8	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAATACCACAT	NA	False	NA	NA	False	NA	NA	NA	84240862	84195941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
tx.4658	chr12	-	6858	13	FSM	ENSMUSG00000042507.16	ENSMUST00000046266.13	6848	13	-2	-8	-2	8	multi-exon	FALSE	canonical	3	40	junction_12	22.3288241716596	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAATACCACAT	NA	False	NA	NA	False	NA	NA	NA	84265657	84195941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84265548
tx.4659	chr12	+	3042	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	122	4	-11	-4	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	230	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTATGACCACTTTTT	NA	False	NA	NA	False	NA	NA	NA	84332127	84362602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
tx.466	chr1	-	3701	3	FSM	ENSMUSG00000032997.17	ENSMUST00000143496.8	3333	3	-367	-1	1	0	multi-exon	FALSE	canonical	3	112	junction_1	2.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATGAGTGGAAACTGG	NA	False	NA	NA	False	NA	NA	NA	75455757	75451218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75452871_75453203_75453384_75453888
tx.4660	chr12	+	2340	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	258	-1	-5	1	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1841	False	NA	NA	False	NA	NA	NA	84363883	84390498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
tx.4661	chr12	-	3359	8	FSM	ENSMUSG00000021234.10	ENSMUST00000021659.2	3357	8	0	-2	0	2	multi-exon	FALSE	canonical	1	2	junction_6	4.96929346597888	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGATGTTTGAGATATTT	417	False	NA	NA	False	NA	NA	NA	84408595	84392088	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84393710_84395050_84395151_84395379_84395545_84400573_84400702_84401483_84401822_84402697_84403252_84404301_84404625_84408465
tx.4662	chr12	+	1537	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	61	4	-1	0	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	189	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTCTTTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	84408802	84420566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
tx.4663	chr12	-	4913	15	FSM	ENSMUSG00000021236.17	ENSMUST00000021662.12	4931	15	0	18	0	0	multi-exon	TRUE	canonical	3	43	junction_8	4.52656557650139	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCCTTTGGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	84452250	84420648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179
tx.4664	chr12	-	4892	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	-11	0	4	0	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTTTCCTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	84455799	84420651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
tx.4665	chr12	-	4964	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	5	3	5	0	multi-exon	FALSE	canonical	3	43	junction_8	4.47014789713072	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTTTCCTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	84455798	84420651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
tx.4666	chr12	-	3400	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	-7	6	-6	-6	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	313	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTGGTCTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	84497784	84477496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
tx.4667	chr12	+	2184	6	FSM	ENSMUSG00000085793.4	ENSMUST00000137170.4	2270	6	84	2	84	-2	multi-exon	FALSE	canonical	3	123	junction_1	15.7810012356631	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGCCCAGGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	84498279	84578345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
tx.4668	chr12	+	2136	6	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	86	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	52.6399088145107	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGCCCAGGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	84498281	84578345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509181_84576463
tx.4669	chr12	-	2207	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	20	2	combination_of_known_splicesites	FALSE	canonical	3	30	junction_16	51.6547659345195	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	84664167	84649304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84664056
tx.467	chr1	-	2950	4	FSM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000079205.14	2892	4	-64	6	-28	0	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATGAGTGGAAACTGG	NA	False	NA	NA	False	NA	NA	NA	75455979	75451218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
tx.4670	chr12	-	2450	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-19	-122	-19	2	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	84664163	84649304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
tx.4671	chr12	-	1163	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	211	1925	-27	5	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	1417	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTGTTTTTTAACG	NA	False	NA	NA	False	NA	NA	NA	84819715	84803260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
tx.4672	chr12	+	852	4	FSM	ENSMUSG00000021241.8	ENSMUST00000222982.2	727	4	-41	-84	-13	0	multi-exon	FALSE	canonical	0	0	junction_3	90.0900783783776	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820037	84821862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84820146_84820369_84820452_84820566_84820683_84821316
tx.4673	chr12	+	859	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	27	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_3	133.217449641137	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820051	84821862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
tx.4674	chr12	+	1490	3	ISM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	30	-3	3	0	intron_retention	FALSE	canonical	3	219	junction_2	50	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820054	84821862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_84820146_84820348_84820452_84820566
tx.4675	chr12	+	1611	2	FSM	ENSMUSG00000021241.8	ENSMUST00000223089.2	843	2	-16	-752	-2	0	multi-exon	FALSE	canonical	3	319	junction_1	0	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820048	84821862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_84820146_84820348
tx.4676	chr12	-	5421	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	27	-2	-17	0	multi-exon	TRUE	canonical	0	0	junction_19	22.9818668733885	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTAAATGAGTGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	85017647	84964921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
tx.4677	chr12	+	716	8	FSM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	31	2	31	-2	multi-exon	FALSE	canonical	3	1900	junction_1	151.77601649692	414	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGTTGTCTCAATTCT	4660	False	NA	NA	False	NA	NA	NA	85017701	85030075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
tx.4678	chr12	+	679	7	ISM	ENSMUSG00000021243.15	ENSMUST00000171040.2	731	8	233	-10	233	-2	3prime_fragment	FALSE	canonical	3	1987	junction_6	120.703148260516	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGTTGTCTCAATTCT	4946	False	NA	NA	False	NA	NA	NA	85017987	85030075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
tx.4679	chr12	+	5097	16	ISM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	-3	12237	-3	-1081	5prime_fragment	FALSE	canonical	3	22	junction_4	32.2065555783636	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATAATTGAGTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	85043091	85105029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
tx.468	chr1	-	3468	9	FSM	ENSMUSG00000026211.19	ENSMUST00000113565.3	3379	9	-93	4	-2	-3	multi-exon	FALSE	canonical	3	16	junction_1	8.70254991367473	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTCATGGTAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	75483098	75472983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
tx.4680	chr12	+	8674	17	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-30	10797	1	382	5prime_fragment	FALSE	canonical	3	62	junction_4	25.712275157014	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAACTGGTACATGAATT	NA	False	NA	NA	False	NA	NA	NA	85043095	85106492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
tx.4681	chr12	+	7036	21	FSM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-34	1	-3	0	multi-exon	FALSE	canonical	3	62	junction_4	25.0129466476863	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCCCTTTTCTCTTATT	NA	False	NA	NA	False	NA	NA	NA	85043091	85117288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
tx.4682	chr12	+	4917	20	FSM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	-3	-21	-3	-1	multi-exon	FALSE	canonical	3	22	junction_4	30.3797753105983	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCCCTTTTCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	85043091	85117287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
tx.4683	chr12	+	4003	17	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	33012	1	-12863	0	3prime_fragment	FALSE	canonical	3	85	junction_1	16.8094792825358	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCCCTTTTCTCTTATT	NA	False	NA	NA	False	NA	NA	NA	85076137	85117288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
tx.4684	chr12	+	4903	3	FSM	ENSMUSG00000021244.16	ENSMUST00000166605.2	915	3	-3899	-89	820	-10	multi-exon	FALSE	canonical	3	136	junction_1	10.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACAGTATGGGCCCTT	NA	False	NA	NA	False	NA	NA	NA	85107553	85117278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85111876_85116392_85116574_85116878
tx.4685	chr12	+	2740	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	25	-1	0	-1	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	533	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCGGGATCTGTGCTCC	NA	False	NA	NA	False	NA	NA	NA	85157631	85180863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
tx.4686	chr12	-	1825	6	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10801	390	-474	1	3prime_fragment	FALSE	canonical	3	114	junction_5	16.4073154415949	29	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAGCAGTCAGTTCTTC	617	False	NA	NA	False	NA	NA	NA	85187237	85182412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
tx.4687	chr12	-	2184	7	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-476	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.9989898897142	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTTTGCATCATTAATA	615	False	NA	NA	False	NA	NA	NA	85187239	85182022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
tx.4688	chr12	+	1457	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	14	134	-9	1	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTCGTTTATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	85266268	85273268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
tx.4689	chr12	-	4520	11	ISM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	2061	-54	2053	54	3prime_fragment	FALSE	canonical	3	46	junction_10	14.1562706953491	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATGCATCATT	NA	False	NA	NA	False	NA	NA	NA	85315312	85281239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925
tx.469	chr1	-	3846	8	ISM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	-804	5802	7	0	5prime_fragment	FALSE	canonical	3	33	junction_3	4.13546137889432	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATGGTAAATAAGTTCAA	NA	False	NA	NA	False	NA	NA	NA	75483089	75472979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
tx.4690	chr12	-	5485	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	-22	0	-22	0	multi-exon	FALSE	canonical	3	46	junction_10	14.4554030620371	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGTTTTTGAAAATG	NA	False	NA	NA	False	NA	NA	NA	85317395	85281293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
tx.4691	chr12	-	4957	12	ISM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	1704	-898	1696	38	3prime_fragment	FALSE	canonical	3	35	junction_11	19.2508452105957	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTGTGAAATTATTAT	NA	False	NA	NA	False	NA	NA	NA	85315669	85281255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925
tx.4692	chr12	-	5590	13	FSM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	-31	-860	-31	0	multi-exon	FALSE	canonical	3	35	junction_11	18.8126730335342	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGTTTTTGAAAATG	NA	False	NA	NA	False	NA	NA	NA	85317404	85281293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
tx.4693	chr12	-	622	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	20	6	3	5	multi-exon	FALSE	canonical	3	386	junction_2	28.5	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTACATTGCTTCCCCCC	4311	False	NA	NA	False	NA	NA	NA	85327189	85319177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_85319602_85326764_85326857_85327083
tx.4694	chr12	+	2398	3	FSM	ENSMUSG00000045064.6	ENSMUST00000059341.5	4482	3	66	2018	66	394	multi-exon	FALSE	canonical	1	1	junction_2	2	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAAGAAGTGGCTGGTA	NA	False	NA	NA	False	NA	NA	NA	85335430	85344114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85335560_85336325_85337656_85343175
tx.4695	chr12	-	5096	17	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	8906	0	8906	0	3prime_fragment	FALSE	canonical	3	74	junction_16	13.8061354114756	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	85377230	85346287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617
tx.4696	chr12	-	5397	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	-11	0	-11	0	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	7946	False	NA	NA	False	NA	NA	NA	85386147	85346287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
tx.4697	chr12	-	1338	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	148	-4	-9	4	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	868	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTGTATGTGTGTTT	8612	False	NA	NA	False	NA	NA	NA	85421473	85389557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
tx.4698	chr12	+	2109	4	FSM	ENSMUSG00000021250.14	ENSMUST00000021674.7	2108	4	0	-1	0	1	multi-exon	FALSE	canonical	1	1	junction_3	3.85861230093008	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTCTTGCTCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	85520663	85524048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85520955_85521708_85521961_85522365_85522474_85522590
tx.4699	chr12	+	437	2	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTCTTAGCTCCATCA	NA	False	NA	NA	False	NA	NA	NA	85571432	85572156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_85571668_85571954
tx.47	chr1	+	5421	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	175	2	-80	-2	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCGTTTCAGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	12762675	12931414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
tx.470	chr1	+	4048	25	FSM	ENSMUSG00000026213.16	ENSMUST00000027414.16	4458	25	10	400	10	0	multi-exon	FALSE	canonical	3	17	junction_1	11.130538571376	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2750	False	NA	NA	False	NA	NA	NA	75498182	75513579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
tx.4700	chr12	+	1841	4	FSM	ENSMUSG00000034271.17	ENSMUST00000177587.9	1645	4	-196	0	-196	0	multi-exon	FALSE	canonical	3	23	junction_1	88.8606899715629	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCGAGTGGTGTCTG	6054	False	NA	NA	False	NA	NA	NA	85645604	85686652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85646002_85654906_85655140_85678418_85678524_85685546
tx.4701	chr12	+	1661	4	FSM	ENSMUSG00000034271.17	ENSMUST00000050687.14	1643	4	-20	2	-20	-2	multi-exon	FALSE	canonical	3	151	junction_1	28.5228952870419	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTCGAGTGGTGTC	6619	False	NA	NA	False	NA	NA	NA	85646169	85686650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85646389_85654906_85655140_85678418_85678524_85685546
tx.4702	chr12	+	3426	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	9	0	9	0	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTCATCATTTAGTG	NA	False	NA	NA	False	NA	NA	NA	85793321	85860359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
tx.4703	chr12	-	1199	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-30	0	-2	0	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	341	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	NA	False	NA	NA	NA	85871326	85862221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
tx.4704	chr12	+	4963	33	FSM	ENSMUSG00000012609.20	ENSMUST00000040273.14	4147	33	-265	-551	-3	0	multi-exon	TRUE	canonical	3	15	junction_32	9.07864940395872	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	85871477	86100533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
tx.4705	chr12	+	801	9	FSM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	-18	0	6	0	multi-exon	FALSE	canonical	3	179	junction_5	10.7637992827812	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	86129342	86209233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
tx.4706	chr12	+	4245	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	-1	-415	-1	1	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTATGATTGAGGTCT	NA	False	NA	NA	False	NA	NA	NA	86288647	86338559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
tx.4707	chr12	+	4347	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	19	-11	2	11	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGGTCTGTTATTAAGG	NA	False	NA	NA	False	NA	NA	NA	86288650	86338569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
tx.4708	chr12	-	770	3	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	7.5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTCCAGGTCACTG	NA	False	NA	NA	False	NA	NA	NA	86516827	86471840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr12_-_86472015_86508048_86508306_86516488
tx.4709	chr12	+	3901	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	1	-2558	1	-2	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	1374	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTCGTTCATGCGTTG	NA	False	NA	NA	False	NA	NA	NA	86516891	86568397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
tx.471	chr1	+	4167	24	FSM	ENSMUSG00000026213.16	ENSMUST00000113553.2	4153	24	-11	-3	-11	0	multi-exon	FALSE	canonical	3	37	junction_10	9.28136128468159	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2752	False	NA	NA	False	NA	NA	NA	75498184	75513579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
tx.4710	chr12	-	3098	5	FSM	ENSMUSG00000021257.15	ENSMUST00000163388.2	820	5	-341	-1937	-341	0	multi-exon	FALSE	canonical	3	66	junction_1	8.69985632065266	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	NA	False	NA	NA	NA	86765301	86747275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488
tx.4711	chr12	-	3839	10	FSM	ENSMUSG00000021257.15	ENSMUST00000021682.9	3850	10	11	0	11	0	multi-exon	FALSE	canonical	3	66	junction_1	10.9341463112378	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	NA	False	NA	NA	NA	86773223	86747275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
tx.4712	chr12	+	4087	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	11	0	11	0	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	86994127	87012136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
tx.4713	chr12	-	4778	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	283	3	-145	-3	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTGTTCTTGTGCTTG	5932	False	NA	NA	False	NA	NA	NA	87194393	87153637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
tx.4714	chr12	+	1923	10	NNC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	152.42338694862	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	NA	False	NA	NA	NA	87193960	87211497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_87194283_87194546_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
tx.4715	chr12	+	1808	10	NNC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	192.522437364814	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	NA	False	NA	NA	NA	87194476	87211497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_87194619_87204297_87204435_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
tx.4716	chr12	+	1665	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	277	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	NA	False	NA	NA	NA	87194482	87211497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
tx.4717	chr12	+	2965	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	476	junction_5	37.1054756947086	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	NA	False	NA	NA	NA	87194481	87211497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
tx.4718	chr12	-	7327	6	FSM	ENSMUSG00000034111.7	ENSMUST00000037418.7	7409	6	82	0	82	0	multi-exon	FALSE	canonical	3	17	junction_3	4.87442304278158	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7827	False	NA	NA	False	NA	NA	NA	87247146	87213010	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
tx.4719	chr12	-	2537	20	FSM	ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	-8	-5	-8	0	multi-exon	FALSE	canonical	3	87	junction_1	8.24352343784865	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCATCTGGTTACTTAG	NA	False	NA	NA	False	NA	NA	NA	87313038	87285641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
tx.472	chr1	-	3773	4	ISM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	137472	-2	0	-2	3prime_fragment	FALSE	canonical	3	180	junction_2	28.003967972811	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATCTGGTTGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	77354244	77343823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050
tx.4720	chr12	+	1391	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	-1	-13	-1	-6	multi-exon	TRUE	canonical	3	2699	junction_7	143.152890295656	1705	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATGTTGACTGACAGC	NA	False	NA	NA	False	NA	NA	NA	87313470	87320766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
tx.4721	chr12	-	2880	5	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-96	-4	intron_retention	FALSE	canonical	3	77	junction_1	7.44983221287567	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTTTGATAAAGGATTT	7573	False	NA	NA	False	NA	NA	NA	87346575	87325415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_87326977_87329073_87329561_87331799_87332161_87333668_87333912_87346347
tx.4722	chr12	-	2887	6	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-68	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	35.5831420759887	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAGTTTGATAAAGGAT	7601	False	NA	NA	False	NA	NA	NA	87346547	87325417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333369_87333912_87346347
tx.4723	chr12	-	2680	7	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-68	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39.8444893722248	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTTTGATAAAGGATT	7601	False	NA	NA	False	NA	NA	NA	87346547	87325416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_87326977_87328088_87328180_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
tx.4724	chr12	-	2605	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-84	5	-84	-5	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTTTGATAAAGGATT	7585	False	NA	NA	False	NA	NA	NA	87346563	87325416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
tx.4725	chr12	+	1036	3	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	11	junction_2	1	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAATGAGCTTGTTGGG	NA	False	NA	NA	False	NA	NA	NA	87346641	87348072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_87347023_87347116_87347291_87347591
tx.4726	chr12	-	2039	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	95	4576	-19	5	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	651	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTACTTGTGAAATCAC	8791	False	NA	NA	False	NA	NA	NA	87435034	87356407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
tx.4727	chr12	-	4064	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	1	-1911	1	0	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	87490605	87472938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
tx.4728	chr12	-	2592	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	508	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	109.640954432588	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAAGCTATTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	87490606	87474338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
tx.4729	chr12	-	4008	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGGTGTTTTGCCTTCT	NA	False	NA	NA	False	NA	NA	NA	87490605	87472939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
tx.473	chr1	-	4376	8	ISM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	127107	-7	-10365	3	3prime_fragment	TRUE	canonical	3	151	junction_7	29.7122252032831	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	77364609	77343818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433
tx.4730	chr12	-	3828	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	3	26	0	-26	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTAATTAAATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	87490606	87472964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
tx.4731	chr12	-	3772	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162247.8	1883	6	-7	-1882	1	-26	multi-exon	FALSE	canonical	3	134	junction_2	71.1983145867934	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTAATTAAATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	87490605	87472964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87490411
tx.4732	chr12	-	3903	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	-9	-1875	1	-33	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAGTGGTAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	87490605	87472971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
tx.4733	chr12	-	1982	4	NNC	ENSMUSG00000079036.11	novel	1883	6	NA	NA	743	173	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	115.494107593803	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAATTTTGGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	87484586	87474673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_87476041_87478169_87478309_87480888_87480980_87484201
tx.4734	chr12	+	397	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	16	2288	0	-2	multi-exon	FALSE	canonical	3	3495	junction_2	126.36015546401	485	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	NA	False	NA	NA	NA	87490681	87496688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
tx.4735	chr12	-	2248	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	-21	5	-21	-5	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	1063	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCAATTCTGTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	87519065	87496684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
tx.4736	chr12	+	1837	2	FSM	ENSMUSG00000072905.6	ENSMUST00000110147.3	1766	2	5	-76	5	76	multi-exon	FALSE	canonical	2	7	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATCAATTC	NA	False	NA	NA	False	NA	NA	NA	87840846	87844705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_87841033_87843054
tx.4737	chr12	-	1031	2	Genic_Genomic	ENSMUSG00000095799.2	novel	435	1	NA	NA	-2770	97	multi-exon	FALSE	canonical	3	16	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGTCTTGTTAATGCAA	NA	False	NA	NA	False	NA	NA	NA	88219640	88216338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr12_-_88217181_88219451
tx.4738	chr12	+	2170	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	-9	-3	-9	2	multi-exon	TRUE	canonical	3	29	junction_1	14.3544418212622	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTCCTTCTCAATCA	NA	False	NA	NA	False	NA	NA	NA	88327314	88428492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
tx.4739	chr12	+	2345	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	-87	-5	7	1	multi-exon	FALSE	canonical	3	17	junction_1	17.7822945651004	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTCTCAATCATTG	NA	False	NA	NA	False	NA	NA	NA	88327330	88428495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
tx.474	chr1	-	5992	16	ISM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	7988	-4	7988	0	3prime_fragment	FALSE	canonical	3	112	junction_15	30.6430343725218	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTGTCTTTGTTC	4971	False	NA	NA	False	NA	NA	NA	77483728	77343821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184
tx.4740	chr12	-	4178	25	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	13.6808234604338	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATGATGCGTCTGTT	6130	False	NA	NA	False	NA	NA	NA	91351205	90965265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
tx.4741	chr12	-	4813	26	FSM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	-6	0	-6	0	multi-exon	TRUE	canonical	3	41	junction_10	9.02405673741029	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATGATGCGTCTGTT	6146	False	NA	NA	False	NA	NA	NA	91351189	90965265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
tx.4742	chr12	-	4575	24	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_21	13.9047529647043	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATGATGCGTCTGTT	6135	False	NA	NA	False	NA	NA	NA	91351200	90965265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91336835_91336971_91348421_91348563_91351007
tx.4743	chr12	-	4884	3	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	22266	0	21896	0	3prime_fragment	FALSE	canonical	3	1040	junction_2	34.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTATTTTGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	91534517	91522035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_91526626_91529682_91529773_91534313
tx.4744	chr12	-	5026	4	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	21848	0	21478	0	3prime_fragment	FALSE	canonical	3	1040	junction_2	41.4487635521254	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTATTTTGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	91534935	91522035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910
tx.4745	chr12	-	5476	7	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	14225	4	13855	-4	3prime_fragment	FALSE	canonical	3	1018	junction_5	45.1319054427008	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTCTTGTATTTTGCA	NA	False	NA	NA	False	NA	NA	NA	91542558	91522039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357
tx.4746	chr12	-	5368	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	51	645	51	-645	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTGCTTGCTTTGCT	-1	True	NA	NA	False	NA	NA	NA	91556732	91522680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
tx.4747	chr12	-	4363	2	FSM	ENSMUSG00000020962.15	ENSMUST00000163693.2	282	2	-75	-4006	-75	4006	multi-exon	FALSE	canonical	3	946	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGCCTCCATCAAATCAC	1540	False	NA	NA	False	NA	NA	NA	91556488	91549392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_91553576_91556308
tx.4748	chr12	-	3729	4	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	27839	3243	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	9.7410927974683	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCGACTCGAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	91652909	91605073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91652728
tx.4749	chr12	-	5290	3	ISM	ENSMUSG00000020961.16	ENSMUST00000052969.15	9896	7	137790	3125	65328	-3125	3prime_fragment	FALSE	canonical	3	26	junction_2	3	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGACTCTGAGACTAT	NA	False	NA	NA	False	NA	NA	NA	91615420	91602907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_91606580_91608494_91608698_91614005
tx.475	chr1	-	6332	18	FSM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	-4	0	-4	0	multi-exon	FALSE	canonical	3	112	junction_15	30.5422731607683	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTGTCTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	77491729	77343821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
tx.4750	chr12	-	6619	7	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	-22	-3128	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	11.1753697428268	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACTCTGACTCTGAGAC	121	False	NA	NA	False	NA	NA	NA	91745933	91602910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91680700_91680899_91707244_91707521_91710379_91710653_91745772
tx.4751	chr12	-	6140	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	88.9223882705254	144	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTGGGCGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	91815926	91772818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808629_91809999_91810038_91815732
tx.4752	chr12	-	6291	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	6	3	6	-3	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	439	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGTCTGGGCGTGTGC	NA	False	NA	NA	False	NA	NA	NA	91815925	91772819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
tx.4753	chr12	+	7489	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	-163	-4103	-163	-5	multi-exon	FALSE	canonical	3	13	junction_1	0	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCTATTGTGTTTATC	NA	False	NA	NA	False	NA	NA	NA	95661967	95751984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_95662753_95745280
tx.4754	chr12	-	3722	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	107	3	-5	-3	multi-exon	FALSE	canonical	3	22	junction_3	6.15648793956424	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTGAGAATTTGCAT	NA	False	NA	NA	False	NA	NA	NA	98225611	98168555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
tx.4755	chr12	+	1963	11	FSM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	-47	-3	-7	0	multi-exon	FALSE	canonical	3	21	junction_2	15.3766056072203	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATATTTATTATTGC	NA	False	NA	NA	False	NA	NA	NA	98594408	98636074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_98594594_98598221_98598297_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
tx.4756	chr12	+	2050	12	FSM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	2	0	2	0	multi-exon	FALSE	canonical	3	39	junction_2	12.115149999242	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATATTTATTATTGC	NA	False	NA	NA	False	NA	NA	NA	98594417	98636074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
tx.4757	chr12	-	5764	19	FSM	ENSMUSG00000021009.16	ENSMUST00000170188.8	5562	19	-203	1	-203	0	multi-exon	FALSE	canonical	3	24	junction_6	7.37467304150739	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCGTGTTCCTGTTGCA	NA	False	NA	NA	False	NA	NA	NA	98703867	98643000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98703623
tx.4758	chr12	-	3435	7	ISM	ENSMUSG00000021009.16	ENSMUST00000085116.4	5696	19	45842	1	-5053	-1	3prime_fragment	FALSE	canonical	3	24	junction_6	10.2428837085396	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCGTGTTCCTGTTGC	NA	False	NA	NA	False	NA	NA	NA	98655062	98643001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448
tx.4759	chr12	+	3544	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-21	17	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_10	357.8025762816	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	NA	NA	NA	98713201	98754029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745399_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
tx.476	chr1	-	3298	2	ISM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	141362	-7	3890	3	3prime_fragment	FALSE	canonical	3	243	junction_1	0	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	77350354	77343818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_77346309_77349546
tx.4760	chr12	+	3529	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-19	4	2	2	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	792	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	98713228	98754008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
tx.4761	chr12	+	3137	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	5	4	1	2	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	289	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	98713227	98754008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
tx.4762	chr12	+	3062	14	FSM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	-14	-2	1	2	multi-exon	FALSE	canonical	3	91	junction_9	361.05984686441	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	98713227	98754008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
tx.4763	chr12	+	3454	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	81	junction_9	361.279762326464	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTCTGTGTTTAATAA	NA	False	NA	NA	False	NA	NA	NA	98713227	98754007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
tx.4764	chr12	+	3418	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	363.982453789557	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTGTGTTTAATAATG	NA	False	NA	NA	False	NA	NA	NA	98713225	98754009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
tx.4765	chr12	+	3833	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-2	2	intron_retention	FALSE	canonical	3	883	junction_11	215.365013149511	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	98713245	98754008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
tx.4766	chr12	-	7533	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	38	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	9.05921492183511	4	2	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCAAGGAAGTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	98867705	98755401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
tx.4768	chr12	-	5270	32	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	29	-333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.11962355686564	6	2	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCTTTAAAAGTCTGA	NA	False	NA	NA	False	NA	NA	NA	98867714	98767032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
tx.4769	chr12	-	4375	25	ISM	ENSMUSG00000051166.11	ENSMUST00000223282.2	7595	44	0	37945	0	-11121	5prime_fragment	FALSE	canonical	3	20	junction_22	6.45927412502537	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTTCATCAATATAATT	NA	False	NA	NA	False	NA	NA	NA	98867743	98793348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
tx.477	chr1	-	3901	5	ISM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	134090	-4	-3382	0	3prime_fragment	FALSE	canonical	3	170	junction_4	28.2964220353033	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTGTCTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	77357626	77343821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500
tx.4770	chr12	+	2304	14	FSM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	-26	-6	-26	0	multi-exon	FALSE	canonical	3	15	junction_7	3.54347470962493	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACTTTTCACAAGTT	NA	False	NA	NA	False	NA	NA	NA	98886806	98949497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
tx.4771	chr12	-	3874	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	15	-1007	15	1007	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	99359316	99160345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
tx.4773	chr12	-	2075	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	-7	0	-7	0	multi-exon	TRUE	canonical	3	69	junction_2	7.87400787401181	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATATTTATGGTATGTA	NA	False	NA	NA	False	NA	NA	NA	99849708	99683790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
tx.4774	chr12	+	2193	15	ISM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-47	9504	-27	8353	5prime_fragment	FALSE	canonical	3	362	junction_1	44.7195341511277	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCACGGTTTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	99850748	99911974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498
tx.4775	chr12	+	1855	14	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	-7	24	combination_of_known_junctions	FALSE	canonical	3	48	junction_13	129.038226527357	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTGTCCACAGAGGT	NA	False	NA	NA	False	NA	NA	NA	99850768	99885587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
tx.4776	chr12	+	2063	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-27	0	-7	0	multi-exon	FALSE	canonical	3	362	junction_1	45.8998910674089	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	False	NA	NA	False	NA	NA	NA	99850768	99921478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
tx.4777	chr12	+	1540	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	11	40	11	-40	multi-exon	FALSE	canonical	3	1446	junction_1	298.758363899657	1262	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGTAATGAGTACCATG	3984	False	NA	NA	False	NA	NA	NA	100076423	100089624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
tx.4778	chr12	-	3717	14	FSM	ENSMUSG00000021179.9	ENSMUST00000021596.9	3718	14	1	0	1	0	multi-exon	TRUE	canonical	2	41	junction_5	13.3828469211889	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8557	False	NA	NA	False	NA	NA	NA	100125906	100091710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
tx.4779	chr12	+	1524	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	92	2499	-2	820	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	2831	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9257	False	NA	NA	False	NA	NA	NA	100165785	100173574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
tx.4780	chr12	-	3455	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	-10	1	-10	-1	multi-exon	FALSE	canonical	3	208	junction_10	15.649378488982	529	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCTTTTGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	100487095	100267029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
tx.4781	chr12	-	5639	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	2	1	2	-1	multi-exon	FALSE	canonical	3	13	junction_6	9.17196816392207	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAACTCAAGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	100691377	100514698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
tx.4782	chr12	-	2729	13	ISM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	14	21528	14	-15608	5prime_fragment	FALSE	canonical	3	13	junction_2	8.96133670584671	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTTTTAATCTTGTG	NA	False	NA	NA	False	NA	NA	NA	100691365	100536225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
tx.4783	chr12	+	2989	13	FSM	ENSMUSG00000021185.17	ENSMUST00000069782.11	3295	13	55	251	17	5	multi-exon	FALSE	canonical	2	6	junction_10	4.43471156521669	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGAACCTCCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	100745370	100838618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
tx.4784	chr12	-	3063	3	FSM	ENSMUSG00000047415.13	ENSMUST00000053668.10	3099	3	39	-3	13	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGTGTGCAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	100865744	100842940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_100845672_100854242_100854332_100865501
tx.4785	chr12	-	4550	5	NIC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	-1140	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	44.9471912359382	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCCCTGGTTTTCTTCA	9276	False	NA	NA	False	NA	NA	NA	100890286	100877781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450
tx.4786	chr12	-	5484	16	ISM	ENSMUSG00000021182.17	ENSMUST00000068411.5	7542	30	83316	0	-567	0	3prime_fragment	TRUE	canonical	3	67	junction_4	25.2186879560024	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCCCTGGTTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	100911999	100877781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105
tx.4787	chr12	-	7548	30	FSM	ENSMUSG00000021182.17	ENSMUST00000068411.5	7542	30	-6	0	-6	0	multi-exon	FALSE	canonical	3	67	junction_4	21.6322633049711	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCCCTGGTTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	100995321	100877781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
tx.4788	chr12	-	4436	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	-26	106	8	-3	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	800	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATTAATTGTATGT	8785	False	NA	NA	False	NA	NA	NA	101049948	101005773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
tx.4789	chr12	-	4624	16	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	206.879825556341	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTGTATTAATTGTATG	8791	False	NA	NA	False	NA	NA	NA	101049942	101005774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
tx.479	chr1	+	4090	5	FSM	ENSMUSG00000032908.10	ENSMUST00000036172.10	4002	5	-88	0	-88	0	multi-exon	FALSE	canonical	2	4	junction_1	2.12132034355964	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTCTGTGGATTT	NA	False	NA	NA	False	NA	NA	NA	78286893	78396926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_78287140_78336707_78336867_78367111_78367292_78369995_78370086_78393511
tx.4790	chr12	-	4480	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	6	-403	6	0	multi-exon	FALSE	canonical	3	147	junction_8	127.060085416792	231	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8783	False	NA	NA	False	NA	NA	NA	101049950	101005770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
tx.4791	chr12	-	4942	12	FSM	ENSMUSG00000021187.15	ENSMUST00000162735.8	5290	12	-1	349	-1	-349	multi-exon	FALSE	canonical	0	0	junction_3	2.40522846460417	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCCAGTTGGAAATTGC	NA	False	NA	NA	False	NA	NA	NA	101684783	101612050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_101615465_101617250_101617451_101618997_101619113_101631811_101632004_101644772_101644890_101655218_101655320_101656035_101656112_101659373_101659466_101660764_101660933_101672641_101672873_101675682_101675796_101684660
tx.4792	chr12	-	2488	11	FSM	ENSMUSG00000021186.10	ENSMUST00000021603.9	5829	11	-31	3372	-31	0	multi-exon	FALSE	canonical	3	12	junction_2	1.74355957741627	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTTTGGTTAATTAT	NA	False	NA	NA	False	NA	NA	NA	101785345	101716195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784992
tx.4793	chr12	-	7041	11	ISM	ENSMUSG00000021188.15	ENSMUST00000177183.8	5076	15	8940	-3537	-1769	34	3prime_fragment	FALSE	canonical	3	18	junction_5	4.10365690573664	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCGGTGTCTGTTGA	NA	False	NA	NA	False	NA	NA	NA	101851635	101800267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514
tx.4794	chr12	-	9776	21	FSM	ENSMUSG00000021188.15	ENSMUST00000021605.14	9873	21	133	-36	6	36	multi-exon	TRUE	canonical	3	11	junction_20	4.94064773081425	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGTGTCTGTTGAGG	7554	False	NA	NA	False	NA	NA	NA	101879393	101800265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
tx.4795	chr12	-	5344	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	19	0	16	0	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	NA	False	NA	NA	NA	101924486	101885159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
tx.4796	chr12	-	5456	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	95.7290447043111	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	NA	False	NA	NA	NA	101924482	101885159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924276
tx.4797	chr12	-	5319	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	96.5931674602298	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	NA	False	NA	NA	NA	101924484	101885159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903706_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
tx.4798	chr12	-	965	9	FSM	ENSMUSG00000021189.12	ENSMUST00000161011.8	1000	9	37	-2	37	0	multi-exon	FALSE	canonical	3	289	junction_2	19.5380238253514	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTCTGTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	101924465	101899182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
tx.4799	chr12	-	307	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	545	9	218	3	multi-exon	FALSE	canonical	3	1653	junction_2	166	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAAAGTGTGATTCTT	NA	False	NA	NA	False	NA	NA	NA	101941968	101934357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_101934470_101935751_101935897_101941918
tx.48	chr1	+	5517	22	FSM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	-73	-814	-3	-1	multi-exon	FALSE	canonical	3	16	junction_1	8.51675685882192	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCGTTTCAGAGAAATG	NA	False	NA	NA	False	NA	NA	NA	12788679	12931415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
tx.480	chr1	-	1897	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	37	17	-1	0	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	345	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	NA	False	NA	NA	NA	78465497	78401721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
tx.4800	chr12	+	5869	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-380	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	56.6248395051111	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTCTTGTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	101941866	101972686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_101942148_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
tx.4801	chr12	+	5739	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-6	-1	-6	1	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	406	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTTTCTTGTGCTTA	NA	False	NA	NA	False	NA	NA	NA	101942240	101972684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
tx.4802	chr12	+	3895	10	FSM	ENSMUSG00000044456.17	ENSMUST00000056950.14	3892	10	-4	1	-4	-1	multi-exon	FALSE	canonical	0	0	junction_8	2.36225462505214	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCTGAAGGAGCCAGAG	NA	False	NA	NA	False	NA	NA	NA	102249302	102357113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_102249586_102279233_102279442_102292053_102292172_102317140_102317214_102324963_102325056_102334622_102336108_102339828_102340138_102348811_102348944_102353812_102353977_102356082
tx.4803	chr12	-	1920	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	85	-15	85	1	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	413	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCTTTGTGGTTTGT	7574	False	NA	NA	False	NA	NA	NA	102405987	102360341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
tx.4804	chr12	+	2939	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	-8	-104	-8	102	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATTTTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102435385	102464268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
tx.4805	chr12	+	1878	8	FSM	ENSMUSG00000021194.7	ENSMUST00000021610.7	1883	8	4	1	4	-1	multi-exon	TRUE	canonical	3	24	junction_1	6.51841974088562	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTTGATTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	102521231	102531286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_102521430_102522143_102522191_102524724_102524819_102525547_102525617_102527603_102527763_102527925_102528343_102528856_102529333_102530868
tx.4806	chr12	-	2948	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	-30	0	-30	0	multi-exon	TRUE	canonical	3	205	junction_5	27.4851250454756	203	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2377	False	NA	NA	False	NA	NA	NA	102671219	102534840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
tx.4807	chr12	-	1939	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	871	-15	871	15	multi-exon	FALSE	canonical	3	96	junction_1	0	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTGTAATACTACATTT	6361	False	NA	NA	False	NA	NA	NA	102724060	102707975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_102709654_102723799
tx.4808	chr12	-	1768	2	FSM	ENSMUSG00000096458.8	ENSMUST00000178384.2	1284	2	16	-500	0	500	multi-exon	FALSE	canonical	3	30	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTTTGTATACATTG	NA	False	NA	NA	False	NA	NA	NA	102709904	102707988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_102709654_102709801
tx.4809	chr12	+	856	2	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	-43	-2158	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTGCTTGCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	102709977	102711662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_102710030_102710858
tx.481	chr1	+	2999	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	-7	-16	-7	16	multi-exon	TRUE	canonical	3	358	junction_1	36.8929090028677	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATATATGCCTGACACTG	NA	False	NA	NA	False	NA	NA	NA	78635592	78684700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
tx.4810	chr12	+	1231	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	-20	2156	-20	-2156	multi-exon	FALSE	canonical	3	165	junction_1	0	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGCTTGCTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	102710000	102711664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_102710426_102710858
tx.4811	chr12	-	1145	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	6	1	6	-1	multi-exon	FALSE	canonical	3	237	junction_1	0	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTTTCTGTAGCCTCT	6368	False	NA	NA	False	NA	NA	NA	102724053	102719534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_102720426_102723799
tx.4812	chr12	+	3242	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	19	0	19	0	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	930	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	102724244	102743966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
tx.4813	chr12	-	7274	9	ISM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	40060	0	1935	0	3prime_fragment	FALSE	canonical	3	58	junction_1	7.75806032459145	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTGAGTTGGACATAGTC	NA	False	NA	NA	False	NA	NA	NA	102804605	102747055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876
tx.4814	chr12	-	8065	11	FSM	ENSMUSG00000041702.8	ENSMUST00000045652.8	4035	11	-189	-3841	4	0	multi-exon	FALSE	canonical	3	58	junction_1	8.02745289615579	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTGAGTTGGACATAGTC	NA	False	NA	NA	False	NA	NA	NA	102844726	102747055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
tx.4815	chr12	-	650	2	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	11705	-4	11705	0	3prime_fragment	FALSE	canonical	3	41	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCCCTGTGATTCCTG	NA	False	NA	NA	False	NA	NA	NA	103290138	103287400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_103287934_103290021
tx.4816	chr12	-	1181	3	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	10038	-4	10038	0	3prime_fragment	FALSE	canonical	3	27	junction_2	7	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCCCTGTGATTCCTG	NA	False	NA	NA	False	NA	NA	NA	103291805	103287400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_103287934_103290021_103290176_103291311
tx.4817	chr12	+	3158	5	FSM	ENSMUSG00000021203.16	ENSMUST00000141055.2	3055	5	-103	0	-19	0	multi-exon	FALSE	canonical	3	84	junction_1	9.35414346693485	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTCTGGCTTCTTAA	8141	False	NA	NA	False	NA	NA	NA	103354921	103372604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369688_103370484
tx.4818	chr12	+	2816	6	FSM	ENSMUSG00000021203.16	ENSMUST00000021620.13	2791	6	-25	0	-9	0	multi-exon	FALSE	canonical	3	84	junction_1	8.60232526704263	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTCTGGCTTCTTAA	8151	False	NA	NA	False	NA	NA	NA	103354931	103372604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
tx.4819	chr12	+	2782	6	NIC	ENSMUSG00000021203.16	novel	424	4	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	32.5047688808888	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTCTGGCTTCTTAA	8420	False	NA	NA	False	NA	NA	NA	103355200	103372604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_103355368_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
tx.482	chr1	+	3135	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	52	763	-6	13	multi-exon	FALSE	canonical	3	149	junction_2	98.3136477470617	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGAATATATGCCTGACA	NA	False	NA	NA	False	NA	NA	NA	78635593	78684697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
tx.4820	chr12	-	2877	9	FSM	ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	-26	-1	-15	1	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	934	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGGTGTTGCAGTGT	NA	False	NA	NA	False	NA	NA	NA	103392104	103374239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
tx.4821	chr12	+	2055	5	NIC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-11	738	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	10.7325439668328	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGTGTTCACAGAGC	NA	False	NA	NA	False	NA	NA	NA	104214152	104220666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_104214232_104216398_104217017_104217730_104218005_104218943_104219095_104219733
tx.4822	chr12	+	2131	5	NIC	ENSMUSG00000079014.5	novel	2200	6	NA	NA	0	-801	intron_retention	FALSE	canonical	3	17	junction_3	5.11737237261468	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATTATCTCTGACATAA	NA	False	NA	NA	False	NA	NA	NA	104229380	104234830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_104229474_104230560_104230695_104231352_104232978_104233914_104234066_104234702
tx.4823	chr12	+	5354	2	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGTCTTGGCTCCA	640	False	NA	NA	False	NA	NA	NA	104343708	104349127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_104344989_104345053
tx.4824	chr12	+	1804	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9695	1	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	56	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTCTCAGCTTGCAGT	659	False	NA	NA	False	NA	NA	NA	104343727	104360517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
tx.4825	chr12	-	1214	3	FSM	ENSMUSG00000021095.6	ENSMUST00000021513.6	1268	3	47	7	47	-7	multi-exon	FALSE	canonical	3	74	junction_1	3	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTTGTATTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	104439542	104437474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_104437906_104438251_104438512_104439019
tx.4826	chr12	-	10465	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-125	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	58.1461367098943	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTAGCTTTGTTTT	4285	False	NA	NA	False	NA	NA	NA	104718336	104653997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104717684
tx.4827	chr12	-	5327	5	ISM	ENSMUSG00000041415.12	ENSMUST00000222115.2	2543	6	3427	-3701	-2509	0	3prime_fragment	FALSE	canonical	3	284	junction_4	24.7184141886165	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTCTTTAGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	104663334	104654000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532
tx.4828	chr12	-	7828	17	ISM	ENSMUSG00000041415.12	ENSMUST00000222528.2	4724	21	9741	-3688	717	2	3prime_fragment	FALSE	canonical	3	218	junction_16	31.9821727685909	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTTTAGCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	104678570	104653998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439
tx.4829	chr12	-	6472	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-139	4	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	289	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGTTTAGTTTTTGC	4271	False	NA	NA	False	NA	NA	NA	104718350	104657682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
tx.483	chr1	+	3647	3	FSM	ENSMUSG00000079470.9	ENSMUST00000053760.12	7393	3	-164	3910	-164	18	multi-exon	FALSE	canonical	2	10	junction_2	87	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTTAAGAGAGCTGT	NA	False	NA	NA	False	NA	NA	NA	78635590	78645319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_78635821_78640857_78640998_78642042
tx.4830	chr12	-	6294	27	FSM	ENSMUSG00000041415.12	ENSMUST00000041987.8	9851	27	-127	3684	-127	2	multi-exon	FALSE	canonical	3	28	junction_26	55.5751530194573	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTGGTTTAGTTTTT	4283	False	NA	NA	False	NA	NA	NA	104718338	104657684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104718006
tx.4831	chr12	-	6361	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-132	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_26	53.666423842203	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTAATTTTGGTTTAGT	4278	False	NA	NA	False	NA	NA	NA	104718343	104657688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104718006
tx.4832	chr12	-	3621	13	FSM	ENSMUSG00000021097.16	ENSMUST00000109936.3	11866	13	-54	8299	-54	64	multi-exon	FALSE	canonical	3	35	junction_6	8.27143679578504	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGAGCTTGAGTTACT	NA	False	NA	NA	False	NA	NA	NA	104831389	104737674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
tx.4833	chr12	+	921	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-46	2050	-44	117	multi-exon	FALSE	canonical	3	651	junction_1	0	184	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTGTGAGTCATTAAA	6314	False	NA	NA	False	NA	NA	NA	104998902	105007115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_104999242_105006533
tx.4834	chr12	+	2515	2	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAACTGTAATTC	NA	False	NA	NA	False	NA	NA	NA	105043740	105083547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr12_+_105043885_105081176
tx.4835	chr12	-	1396	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	-1	3	-1	-3	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	728	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	NA	False	NA	NA	NA	105188997	105183011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
tx.4836	chr12	-	1354	5	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	850.691777320082	302	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	NA	False	NA	NA	NA	105188999	105183011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_105183321_105183364_105183961_105184481_105184552_105184917_105185089_105188791
tx.4837	chr12	+	3576	3	NNC	ENSMUSG00000097929.10	novel	2876	4	NA	NA	-260	0	intron_retention	FALSE	canonical	3	11	junction_1	10.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTTATCTAATTTA	NA	False	NA	NA	False	NA	NA	NA	105302592	105350189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_105303253_105303488_105303819_105347603
tx.4838	chr12	+	3091	3	FSM	ENSMUSG00000097929.10	ENSMUST00000180458.9	3282	3	190	1	190	1	multi-exon	FALSE	canonical	3	14	junction_1	9	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATTTTATCTAATTTAT	NA	False	NA	NA	False	NA	NA	NA	105303042	105350190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_105303217_105303488_105303819_105347603
tx.4839	chr12	+	3889	3	FSM	ENSMUSG00000021070.7	ENSMUST00000001652.7	3792	3	-96	-1	-96	1	multi-exon	FALSE	canonical	3	6	junction_1	4.5	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGTTTCCCTGTGTCAA	NA	False	NA	NA	False	NA	NA	NA	105529388	105561497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_105529508_105554455_105554560_105557831
tx.484	chr1	-	4401	4	ISM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	51825	0	12712	0	3prime_fragment	FALSE	canonical	3	633	junction_3	22.4845626053867	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	79687661	79679978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809
tx.4840	chr12	-	5266	12	ISM	ENSMUSG00000041341.11	ENSMUST00000221015.2	3687	21	8693	-2602	-8507	2602	3prime_fragment	FALSE	canonical	3	63	junction_11	8.44035955522557	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTCTGTTGCTAGAGC	NA	False	NA	NA	False	NA	NA	NA	105604395	105579792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169
tx.4841	chr12	-	7602	42	NIC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_40	9.83879584241854	73	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTATACGTCCATG	NA	False	NA	NA	False	NA	NA	NA	105651523	105582394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
tx.4842	chr12	+	530	2	FSM	ENSMUSG00000044715.8	ENSMUST00000222284.2	1064	2	538	-4	-17	4	multi-exon	FALSE	canonical	3	132	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGGGTGTAAATACATT	NA	False	NA	NA	False	NA	NA	NA	105651625	105665414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_105651718_105664976
tx.4843	chr12	+	1649	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	-8	1079	-8	-1079	multi-exon	FALSE	canonical	3	113	junction_2	9.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGAAAGGACCTGGCT	NA	False	NA	NA	False	NA	NA	NA	105651634	105668203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_105651718_105664976_105665236_105666896
tx.4844	chr12	+	2361	4	NNC	ENSMUSG00000044715.8	novel	2720	3	NA	NA	-2	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	58.2656750487703	2	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATAAAGCAGTCATGC	NA	False	NA	NA	False	NA	NA	NA	105651640	105669284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_105651718_105664976_105665236_105666896_105668622_105668984
tx.4845	chr12	+	1622	6	ISM	ENSMUSG00000041323.7	ENSMUST00000040876.7	3099	18	55415	8	16116	-8	3prime_fragment	FALSE	canonical	3	37	junction_2	5.54977477020464	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGAAATTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	105727649	105748698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_105727856_105730211_105730281_105732812_105733011_105734788_105735010_105747108_105747268_105747929
tx.4846	chr12	+	1569	5	NIC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	16100	-8	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	14.2653426176871	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGAAATTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	105727633	105748698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_105727856_105732812_105733011_105734788_105735010_105747108_105747268_105747929
tx.4847	chr12	+	4506	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	11	-137	1	0	multi-exon	FALSE	canonical	3	846	junction_12	378.82265398812	1435	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	105750963	105805203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
tx.4848	chr12	+	1085	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-52	0	1	0	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTTATTTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	105750963	105775968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
tx.4849	chr12	+	4019	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	449.844346977859	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTCAGGGTCCATAAAC	NA	False	NA	NA	False	NA	NA	NA	105750970	105803121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
tx.485	chr1	-	4506	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	43	2	-5	-2	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	865	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTAATTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	79739443	79679980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
tx.4850	chr12	+	1703	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-22	2030	-13	-13	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGGTCTTTTACACAAG	NA	False	NA	NA	False	NA	NA	NA	105976528	106041655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
tx.4851	chr12	+	1772	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	-43	13	-10	-13	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGGTCTTTTACACAAG	NA	False	NA	NA	False	NA	NA	NA	105976531	106041655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
tx.4852	chr12	+	1643	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	43	-177	-12	-12	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	NA	False	NA	NA	NA	105976529	106041656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
tx.4853	chr12	+	4189	9	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	3	892	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	336.388168638554	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGTTTTTTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	105976544	106044577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
tx.4854	chr12	+	3155	13	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	19	-804	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	294.09648596261	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTAGCCTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	105976593	106042881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_105976969_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
tx.4855	chr12	-	2889	14	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-19	-8	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	177.875064192647	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGTGTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	108145592	108072697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108133531_108133655_108145411
tx.4856	chr12	-	2763	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	-19	11	-19	-11	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	637	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTGGTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	108145592	108072700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
tx.4857	chr12	-	2610	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-19	-15	combination_of_known_junctions	FALSE	canonical	3	90	junction_9	135.793596411783	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCATGACTGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	108145592	108072704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
tx.4858	chr12	+	2569	12	FSM	ENSMUSG00000021258.11	ENSMUST00000221167.2	2789	12	221	-1	62	1	multi-exon	FALSE	canonical	3	54	junction_11	12.5217166726353	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTATGTGTGAGTACAGC	NA	False	NA	NA	False	NA	NA	NA	108146058	108169617	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
tx.4859	chr12	-	4297	6	FSM	ENSMUSG00000084883.3	ENSMUST00000222310.2	4298	6	4	-3	4	3	multi-exon	TRUE	canonical	3	57	junction_4	9.83056458195561	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGTGTAGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	108241680	108169857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108187967_108188042_108240596
tx.486	chr1	+	1326	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	98	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	2.44948974278318	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	79753832	79759162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
tx.4860	chr12	-	4300	6	NNC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	24.5307969703391	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGTGTAGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	108241686	108169857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177879_108187967_108188042_108240596
tx.4861	chr12	-	4324	7	NNC	ENSMUSG00000084883.3	novel	1302	7	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	31.7122478967775	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGAGTGTGTAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	108241673	108169859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177879_108183045_108183085_108187967_108188042_108240596
tx.4862	chr12	-	4342	7	FSM	ENSMUSG00000084883.3	ENSMUST00000136175.3	1302	7	-294	-2746	-2	3	multi-exon	FALSE	canonical	2	6	junction_4	32.190405748021	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGTGTAGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	108241686	108169857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108183045_108183085_108187967_108188042_108240596
tx.4863	chr12	+	5189	9	FSM	ENSMUSG00000021260.9	ENSMUST00000021685.8	5174	9	-17	2	-17	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	108272511	108297126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_108272943_108277946_108278594_108282709_108282854_108284712_108285042_108285584_108285712_108286214_108286361_108288061_108288144_108293384_108293468_108293926
tx.4864	chr12	+	3904	22	FSM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	265	-9	3	-2	multi-exon	TRUE	canonical	1	1	junction_11	3.09120616516523	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTACGTTTCTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	108389339	108505832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_108389521_108429785_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
tx.4865	chr12	+	2211	14	FSM	ENSMUSG00000021262.16	ENSMUST00000021689.14	2180	14	-31	0	-27	0	multi-exon	FALSE	canonical	3	149	junction_6	17.7207129833721	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	NA	False	NA	NA	False	NA	NA	NA	108520951	108654775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
tx.4866	chr12	+	2131	13	FSM	ENSMUSG00000021262.16	ENSMUST00000077735.13	2121	13	-10	0	-10	0	multi-exon	FALSE	canonical	3	17	junction_10	48.559814204294	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	NA	False	NA	NA	False	NA	NA	NA	108520968	108654775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108652308_108652376_108652666_108652725_108654287
tx.4867	chr12	+	2260	15	NNC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	61.4242938710004	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	NA	False	NA	NA	False	NA	NA	NA	108521003	108654775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_108521473_108572169_108572271_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
tx.4868	chr12	+	2343	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	319	3516	319	1068	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACTCAGTGACAGTG	NA	False	NA	NA	False	NA	NA	NA	108759217	108782558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
tx.4869	chr12	+	5053	4	FSM	ENSMUSG00000021264.13	ENSMUST00000126912.2	715	4	244	-4582	244	-2	multi-exon	FALSE	canonical	3	69	junction_1	9.93310961716756	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGTGTTCTTGTTTG	6440	False	NA	NA	False	NA	NA	NA	108772408	108786072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_108772568_108778844_108778906_108780531_108780691_108781398
tx.487	chr1	-	2026	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	60	124	-1	-124	multi-exon	FALSE	canonical	3	45	junction_4	6.12244844812923	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCGCTGGACACCATTT	NA	False	NA	NA	False	NA	NA	NA	79836353	79772037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
tx.4870	chr12	+	2874	2	NIC	ENSMUSG00000021264.13	novel	715	4	NA	NA	6719	975	intron_retention	FALSE	canonical	3	91	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCTTATTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	108778883	108782465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_108780691_108781398
tx.4871	chr12	-	1974	4	FSM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	-1	3	-1	-3	multi-exon	FALSE	canonical	3	8	junction_1	5.09901951359278	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGAAGCTCCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	108801810	108791801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_108793415_108793599_108793684_108797122_108797167_108801577
tx.4872	chr12	-	1858	11	NIC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_1	519.514003661114	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	NA	False	NA	NA	NA	108860066	108825959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
tx.4873	chr12	-	2797	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	30	4	-7	0	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	2860	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	NA	False	NA	NA	NA	108860070	108825959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
tx.4874	chr12	+	2663	7	NIC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	19.6694913225759	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	4861	False	NA	NA	False	NA	NA	NA	108860208	108994378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_108860257_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
tx.4875	chr12	+	2821	8	NIC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	25.1054917156728	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTGGTCATGGTGTT	4873	False	NA	NA	False	NA	NA	NA	108860220	108994380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_108860257_108862817_108862986_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
tx.4876	chr12	+	1608	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-17643	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.6262900483478	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	108969084	108994378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_108969174_108990888_108991060_108992335_108992477_108993171
tx.4877	chr12	-	3687	6	NIC	ENSMUSG00000040867.14	novel	2707	7	NA	NA	1	5	intron_retention	FALSE	canonical	3	8	junction_3	1.6	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTTTGCATTGTTTC	NA	False	NA	NA	False	NA	NA	NA	109034142	108998107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_109001338_109002921_109003030_109003578_109003646_109004777_109004940_109018759_109018789_109034051
tx.4878	chr12	+	1642	5	FSM	ENSMUSG00000040856.18	ENSMUST00000109844.11	1703	5	-20	81	-20	1	multi-exon	FALSE	canonical	3	24	junction_4	4.02336923485777	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGAGTTAAAGAAATAAG	NA	False	NA	NA	False	NA	NA	NA	109419360	109426545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
tx.4879	chr12	+	1878	6	ISM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	4390	-2	-3	1	3prime_fragment	FALSE	canonical	3	289	junction_1	49.6531972787252	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109511277	109538157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
tx.488	chr1	-	4242	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-221	688	-221	-688	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	952	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATGCGTCTTGGATTA	NA	False	NA	NA	False	NA	NA	NA	80318418	80243327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
tx.4880	chr12	+	2100	5	ISM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	7471	-5	-1233	0	3prime_fragment	FALSE	canonical	3	333	junction_1	37.877268908938	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	NA	NA	NA	109514358	109538160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
tx.4881	chr12	+	3229	10	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	1	0	intron_retention	FALSE	canonical	3	549	junction_7	35.1002092779804	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2866	False	NA	NA	False	NA	NA	NA	109612564	109628150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
tx.4882	chr12	+	2373	11	FSM	ENSMUSG00000097451.12	ENSMUST00000181253.10	2368	11	2	-7	2	0	multi-exon	FALSE	canonical	3	396	junction_3	76.4947056991528	461	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
tx.4883	chr12	+	1922	8	FSM	ENSMUSG00000097451.12	ENSMUST00000238384.2	2352	8	430	0	1	0	multi-exon	FALSE	canonical	3	549	junction_5	36.3862499259469	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1331	False	NA	NA	False	NA	NA	NA	109617102	109628150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
tx.4884	chr12	+	2706	2	FSM	ENSMUSG00000093351.3_ENSMUSG00000097391.9	ENSMUST00000182300.2	694	2	-2012	0	-1926	0	multi-exon	FALSE	canonical	3	58	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTGCGTGTCTGTATT	2777	False	NA	NA	False	NA	NA	NA	109712385	109715892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_109714728_109715528
tx.4885	chr12	-	2275	4	FSM	ENSMUSG00000113581.2	ENSMUST00000222401.2	1380	4	-891	-4	-891	1	multi-exon	FALSE	canonical	1	5	junction_3	2.05480466765633	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTACAGTGTGGACTTAC	NA	False	NA	NA	False	NA	NA	NA	110245497	110241817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_110242012_110243059_110243861_110243984_110244184_110244416
tx.4886	chr12	+	4525	16	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_15	394.62378145379	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	NA	False	NA	NA	False	NA	NA	NA	110413543	110549496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110546834
tx.4887	chr12	+	2661	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	321.388242421629	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATCAGTGTGTATTTTC	NA	False	NA	NA	False	NA	NA	NA	110413545	110538119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
tx.4888	chr12	+	4585	17	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	408.246995549263	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	NA	False	NA	NA	False	NA	NA	NA	110413551	110549496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
tx.4889	chr12	+	4398	15	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	190	junction_14	348.147077763267	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	NA	False	NA	NA	False	NA	NA	NA	110413552	110549495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
tx.489	chr1	-	4059	15	FSM	ENSMUSG00000004364.15	ENSMUST00000164108.8	2442	15	-405	-1212	-236	-688	multi-exon	FALSE	canonical	1	7	junction_14	163.524322599522	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATGCGTCTTGGATTA	NA	False	NA	NA	False	NA	NA	NA	80318433	80243327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80317962
tx.4890	chr12	+	1596	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	0	771	0	6	multi-exon	FALSE	canonical	3	738	junction_1	90.3704039902189	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGTATAAGTACTTATT	4920	False	NA	NA	False	NA	NA	NA	110452171	110537351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
tx.4891	chr12	-	2770	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	86	425	-20	-2	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	18754	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	110662743	110657463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
tx.4892	chr12	+	2617	5	NIC	ENSMUSG00000037957.15	novel	960	3	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	61.3977809045246	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGTTTATCCTTTTTT	5358	False	NA	NA	False	NA	NA	NA	110704437	110770673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110763376_110763442_110769838
tx.4893	chr12	+	2380	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	4	0	4	0	multi-exon	FALSE	canonical	3	142	junction_2	4	170	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	5350	False	NA	NA	False	NA	NA	NA	110704429	110761462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_110704712_110745729_110745913_110759547
tx.4894	chr12	-	1678	12	FSM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	15	0	3	0	multi-exon	FALSE	canonical	3	80	junction_11	66.0974737267458	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7675	False	NA	NA	False	NA	NA	NA	110807358	110774231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
tx.4895	chr12	-	1507	11	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_10	69.6330381356436	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7672	False	NA	NA	False	NA	NA	NA	110807361	110774231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
tx.4896	chr12	+	3723	8	FSM	ENSMUSG00000021271.6	ENSMUST00000170060.4	3723	8	2	-2	2	2	multi-exon	TRUE	canonical	3	8	junction_3	20.4500386706884	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTCTTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	110816714	110836432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_110816998_110821433_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
tx.4897	chr12	+	3364	6	NIC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	19.8232187093822	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTCTTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	110816716	110836432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110833141_110833260_110834583
tx.4898	chr12	+	3493	7	FSM	ENSMUSG00000021271.6	ENSMUST00000222460.2	2385	7	-23	-1085	4	2	multi-exon	FALSE	canonical	3	41	junction_4	9.97914491994847	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTCTTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	110816716	110836432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
tx.4899	chr12	+	3459	2	ISM	ENSMUSG00000021271.6	ENSMUST00000222460.2	2385	7	12	10701	12	2902	5prime_fragment	FALSE	canonical	3	53	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACTTAAGTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	110816751	110824646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_110816998_110821433
tx.49	chr1	-	8564	10	FSM	ENSMUSG00000025938.17	ENSMUST00000188454.7	8463	10	-101	0	-101	0	multi-exon	FALSE	canonical	1	1	junction_1	2.330686329267	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTCTAGATTGT	NA	False	NA	NA	False	NA	NA	NA	13062975	12936772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_12942553_12946533_12946599_12949361_12949604_12951516_12951677_12964650_12964850_12991261_12991427_13009212_13009425_13014203_13014337_13059803_13061188_13062751
tx.490	chr1	-	4109	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-216	-688	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATGCGTCTTGGATTA	NA	False	NA	NA	False	NA	NA	NA	80318413	80243327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
tx.4900	chr12	-	1325	4	FSM	ENSMUSG00000021276.11	ENSMUST00000221102.2	536	4	-4	-785	1	0	multi-exon	FALSE	canonical	2	10	junction_1	203.882318997995	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3371	False	NA	NA	False	NA	NA	NA	110855557	110839595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_110840564_110846118_110846249_110850323_110850493_110855499
tx.4901	chr12	-	1457	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	20	552	-1	0	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3369	False	NA	NA	False	NA	NA	NA	110855559	110839595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
tx.4902	chr12	+	7753	20	FSM	ENSMUSG00000021275.17	ENSMUST00000165978.3	7778	20	21	4	9	-2	multi-exon	FALSE	canonical	3	17	junction_1	4.72278616298412	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTCTCTTAATTTTGCA	5404	False	NA	NA	False	NA	NA	NA	110855718	110938824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
tx.4903	chr12	-	1593	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	-27	-3	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	45.784519460427	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGATCTGCCTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	110945456	110942859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
tx.4904	chr12	-	1695	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	13	-2	13	1	multi-exon	FALSE	canonical	3	51	junction_1	30.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGATCTGCCTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	110945442	110942858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_110944205_110944381_110944562_110945273
tx.4905	chr12	-	1498	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	5	1074	5	0	multi-exon	FALSE	canonical	3	78	junction_1	17	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	110945469	110942860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_110943983_110944381_110944562_110945273
tx.4906	chr12	-	1582	4	NNC	ENSMUSG00000037904.15	novel	1563	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	38.9386982604994	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	110945428	110942860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_110943983_110944079_110944205_110944381_110944562_110945273
tx.4907	chr12	+	5684	12	FSM	ENSMUSG00000037896.18	ENSMUST00000084968.14	5684	12	-5	5	-5	-5	multi-exon	FALSE	canonical	3	71	junction_1	9.8114455005324	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATGCATCGCTATGTCC	NA	False	NA	NA	False	NA	NA	NA	111005779	111082330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
tx.4908	chr12	+	7160	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-102	2	-9	2	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCGGCTCTCTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	111132794	111233580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
tx.4909	chr12	+	7279	13	NIC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	15.2886577421157	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTCTCTGGCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	111132787	111233583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
tx.491	chr1	+	3503	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	133	0	-57	0	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	410	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	NA	False	NA	NA	NA	82294305	82423087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
tx.4910	chr12	+	1543	12	FSM	ENSMUSG00000021278.8	ENSMUST00000021707.8	1701	12	-10	168	-10	6	multi-exon	FALSE	canonical	3	12	junction_1	7.23969772438711	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCTGGTCCTACTTGTA	NA	False	NA	NA	False	NA	NA	NA	111237518	111242692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111237599_111238130_111238250_111238331_111238377_111240576_111240665_111240792_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
tx.4911	chr12	-	6655	37	FSM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	59	0	-40	0	multi-exon	TRUE	canonical	3	105	junction_28	14.8707393524629	167	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	NA	False	NA	NA	NA	111344093	111259409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
tx.4912	chr12	+	3596	12	FSM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	-46	-3	-27	3	multi-exon	FALSE	canonical	3	52	junction_2	667.668312267859	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	NA	NA	NA	111504603	111513025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
tx.4913	chr12	+	3733	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	156	161	-25	3	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	2857	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	NA	NA	NA	111504605	111513025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
tx.4914	chr12	+	3572	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	3	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	707.608853816853	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	NA	NA	NA	111504604	111513025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509533_111509699_111509960_111510096_111510962
tx.4915	chr12	+	3645	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-19	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	695.298525814632	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	NA	NA	NA	111504611	111513025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
tx.4916	chr12	+	3789	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	15	3	intron_retention	FALSE	canonical	3	2160	junction_7	92.3556170462847	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	NA	NA	NA	111504664	111513025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
tx.4917	chr12	+	4225	10	ISM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	434	1	-132	-1	3prime_fragment	FALSE	canonical	3	2160	junction_6	86.485708517522	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTCTGTCTGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	111505083	111513021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
tx.4918	chr12	+	3377	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-24	2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_16	115.676272415738	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	712	False	NA	NA	False	NA	NA	NA	111540932	111622657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
tx.4919	chr12	+	3421	18	FSM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	-551	-63	-23	2	multi-exon	FALSE	canonical	3	315	junction_16	68.4977205187368	293	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	713	False	NA	NA	False	NA	NA	NA	111540933	111622657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
tx.492	chr1	+	3439	6	ISM	ENSMUSG00000026142.16	ENSMUST00000140020.2	3687	7	1270	0	1270	0	3prime_fragment	FALSE	canonical	3	176	junction_3	13.1969693490589	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	1371	False	NA	NA	False	NA	NA	NA	82318039	82423087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
tx.4920	chr12	+	3373	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_11	112.928461294052	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	713	False	NA	NA	False	NA	NA	NA	111540933	111622657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
tx.4921	chr12	+	3346	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	-20	-5	-20	2	multi-exon	FALSE	canonical	3	91	junction_15	105.235101875119	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	716	False	NA	NA	False	NA	NA	NA	111540936	111622657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
tx.4922	chr12	+	3391	17	FSM	ENSMUSG00000007411.17	ENSMUST00000084953.13	3365	17	-24	-2	-20	2	multi-exon	FALSE	canonical	3	31	junction_15	118.351634441608	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	716	False	NA	NA	False	NA	NA	NA	111540936	111622657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
tx.4923	chr12	-	1433	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	39	0	-16	0	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	5914	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	111638733	111635794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
tx.4924	chr12	+	1985	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	NA	False	NA	NA	NA	111644545	111650336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
tx.4925	chr12	+	2421	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	11	1	0	-1	multi-exon	FALSE	canonical	3	213	junction_2	1	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTGTCTTGTTCCCAC	NA	False	NA	NA	False	NA	NA	NA	111644549	111650335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111645397_111647235_111647503_111649028
tx.4926	chr12	-	2107	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	32	0	32	0	multi-exon	FALSE	canonical	3	159	junction_1	0	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	111679659	111675921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_111677847_111679477
tx.4927	chr12	-	2410	2	FSM	ENSMUSG00000049792.7	ENSMUST00000160576.2	1852	2	-142	-416	-116	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	111679503	111675921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_111677847_111679018
tx.4928	chr12	+	1045	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	20	0	1	0	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGCAAGTTGAGAATAA	1561	False	NA	NA	False	NA	NA	NA	111679714	111700654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
tx.4929	chr12	+	2411	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	41.916157811926	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	111725301	111761331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111760770
tx.493	chr1	+	1659	7	NIC	ENSMUSG00000026150.15	novel	1706	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_4	124.696520489636	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	82702629	82730111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82728240_82728326_82729305
tx.4930	chr12	+	2397	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	19	3	combination_of_known_splicesites	FALSE	canonical	2	52	junction_13	31.1312633144811	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	111725301	111773148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
tx.4931	chr12	+	2430	16	FSM	ENSMUSG00000021288.20	ENSMUST00000084941.12	2504	16	19	55	19	-6	multi-exon	FALSE	canonical	2	29	junction_13	35.2026514152935	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGCCTGTTCATAAC	NA	False	NA	NA	False	NA	NA	NA	111725301	111773154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
tx.4932	chr12	+	2417	15	NIC	ENSMUSG00000021288.20	novel	2261	14	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_13	47.7933476713303	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	111725298	111761331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111760082_111760134_111760770
tx.4933	chr12	-	2461	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	-39	0	-7	0	multi-exon	FALSE	canonical	3	57	junction_7	12.8809303758284	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACTTGCAAATTATT	NA	False	NA	NA	False	NA	NA	NA	111780314	111769626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
tx.4934	chr12	-	2451	8	NIC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	27.3488424558238	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACTTGCAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	111780323	111769625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776379_111777291_111777430_111778494_111778654_111780258
tx.4935	chr12	-	4019	7	ISM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	8	0	8	0	intron_retention	FALSE	canonical	3	68	junction_3	10.4947076609541	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACTTGCAAATTATT	NA	False	NA	NA	False	NA	NA	NA	111780267	111769626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494
tx.4936	chr12	+	3707	6	NIC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	-1	2	intron_retention	FALSE	canonical	3	728	junction_1	25.6935789644028	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	NA	False	NA	NA	NA	111780640	111794822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111794120_111794251
tx.4937	chr12	+	1343	8	FSM	ENSMUSG00000021286.9	ENSMUST00000223211.2	794	8	-18	-531	-18	1	multi-exon	FALSE	canonical	3	188	junction_5	258.732309855699	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGCTCTGGCCTCAC	NA	False	NA	NA	False	NA	NA	NA	111780623	111794821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
tx.4938	chr12	+	1289	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	20	-1	-18	1	multi-exon	FALSE	canonical	3	470	junction_5	111.029525602677	283	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGCTCTGGCCTCAC	NA	False	NA	NA	False	NA	NA	NA	111780623	111794821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
tx.4939	chr12	-	4394	17	FSM	ENSMUSG00000021285.16	ENSMUST00000054815.15	4389	17	-5	0	-5	0	multi-exon	FALSE	canonical	3	36	junction_7	8.14108983797624	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTCCTTTGAGTCTT	1108	False	NA	NA	False	NA	NA	NA	111874549	111794890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235_111801738_111802046_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111832848_111832969_111838719_111838868_111874295
tx.494	chr1	+	1707	8	FSM	ENSMUSG00000026150.15	ENSMUST00000160786.8	1645	8	-22	-40	0	0	multi-exon	FALSE	canonical	3	146	junction_5	134.32947615198	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	82702638	82730111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
tx.4940	chr12	-	396	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	-30	0	-30	0	multi-exon	TRUE	canonical	3	2424	junction_1	129.659382828839	167	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	NA	False	NA	NA	NA	111933441	111927808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
tx.4941	chr12	+	4850	36	FSM	ENSMUSG00000054003.14	ENSMUST00000079009.11	4809	36	-38	-3	-38	3	multi-exon	FALSE	canonical	1	1	junction_4	3.2893147974517	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTGCTCAGAGATGA	NA	False	NA	NA	False	NA	NA	NA	111937954	112035291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960364_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111973945_111974011_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992109_111992208_111992273_111992344_111992409_111992686_111992732_111993528_111993583_111997621_111997739_111999112_111999221_112001015_112001117_112002787_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
tx.4942	chr12	+	4549	13	NIC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	-36	14	intron_retention	TRUE	canonical	3	16	junction_8	3.76662979332984	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTCTGTGGGCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	112073266	112094007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_112073408_112078625_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
tx.4943	chr12	+	2547	15	FSM	ENSMUSG00000037686.7	ENSMUST00000079400.6	2722	15	176	-1	-14	1	multi-exon	FALSE	canonical	2	5	junction_3	6.52467842666814	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGCCTGGATGGGTC	NA	False	NA	NA	False	NA	NA	NA	112073288	112093994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112073408_112078625_112078735_112079414_112079527_112080813_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
tx.4944	chr12	+	2854	5	ISM	ENSMUSG00000021294.8	ENSMUST00000128402.3	6918	16	31011	2	-1935	-2	3prime_fragment	FALSE	canonical	1	1	junction_2	5.21416340365355	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGTTCTGACTTTCCG	NA	False	NA	NA	False	NA	NA	NA	112143652	112148179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_112144834_112145576_112145783_112145913_112145935_112146228_112146380_112146884
tx.4945	chr12	-	2395	4	FSM	ENSMUSG00000054013.7	ENSMUST00000066791.7	2380	4	-13	-2	-13	2	multi-exon	FALSE	canonical	1	1	junction_3	2.16024689946929	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTGGATGAGGAGTC	NA	False	NA	NA	False	NA	NA	NA	112477619	112466620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_112468357_112469675_112469755_112470967_112471106_112477177
tx.4946	chr12	+	1795	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	0	-18	0	-3	multi-exon	FALSE	canonical	3	62	junction_2	10.1005362893924	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTCTTGACTTCGTC	NA	False	NA	NA	False	NA	NA	NA	112586478	112607791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
tx.4947	chr12	+	1445	11	ISM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	12188	-16	-7139	-5	3prime_fragment	FALSE	canonical	3	69	junction_4	9.672641831475	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACCTGTCTTGACTTCG	9421	False	NA	NA	False	NA	NA	NA	112598666	112607789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
tx.4948	chr12	+	1722	3	ISM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	199	1	-89	-1	intron_retention	FALSE	canonical	3	1739	junction_2	34.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGACTCCCTCCCTTCC	7054	False	NA	NA	False	NA	NA	NA	112611311	112615578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_112611519_112613271_112613467_112614258
tx.4949	chr12	+	726	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	198	0	-90	0	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	368	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7053	False	NA	NA	False	NA	NA	NA	112611310	112615579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
tx.495	chr1	+	1645	7	NIC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	82702640	82730111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
tx.4950	chr12	-	2677	14	FSM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	8	5	8	-5	multi-exon	TRUE	canonical	3	224	junction_13	42.5045768506691	541	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGTTTGCTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	112640702	112620259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
tx.4951	chr12	+	6641	19	FSM	ENSMUSG00000072825.12	ENSMUST00000101018.11	6641	19	-4	4	-4	1	multi-exon	FALSE	canonical	0	0	junction_4	23.8627764261712	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTGCCGCCTCGGCCCT	9009	False	NA	NA	False	NA	NA	NA	112688603	112713022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
tx.4952	chr12	+	4068	8	ISM	ENSMUSG00000072825.12	ENSMUST00000092279.7	3817	17	15949	-1	905	1	3prime_fragment	FALSE	canonical	3	42	junction_1	18.9542951892823	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTGCCGCCTCGGCCCT	NA	False	NA	NA	False	NA	NA	NA	112704576	112713022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr12_+_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
tx.4953	chr12	+	1976	11	FSM	ENSMUSG00000052160.8	ENSMUST00000063888.5	1982	11	3	3	3	-3	multi-exon	FALSE	canonical	3	9	junction_5	2.92574776766556	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTCTGTCTGTGTTCTC	4283	False	NA	NA	False	NA	NA	NA	112727091	112735421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112727218_112728959_112729044_112729830_112729998_112730396_112730581_112730881_112731003_112731431_112731560_112733136_112733338_112733931_112734072_112734187_112734354_112734458_112734556_112734859
tx.4954	chr12	+	1963	5	FSM	ENSMUSG00000037594.12	ENSMUST00000037014.11	1960	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	27	junction_2	3.74165738677394	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGTTGACTCATT	3898	False	NA	NA	False	NA	NA	NA	112772553	112779872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112773429_112774493_112774631_112775802_112775933_112778082_112778200_112779168
tx.4955	chr12	-	2031	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	-33	-4	-33	-4	multi-exon	FALSE	canonical	3	463	junction_1	0	425	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGTGTTAGGAGCCTTT	9579	False	NA	NA	False	NA	NA	NA	112793076	112783852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_112785733_112792925
tx.4956	chr12	-	5145	26	FSM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	-39	0	-39	0	multi-exon	FALSE	canonical	3	8	junction_25	7.23723704185513	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGGCCTCCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	112893435	112871438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
tx.4957	chr12	-	816	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	-12	437	-12	1	multi-exon	FALSE	canonical	3	180	junction_2	18.0277563773199	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCGCTGGCTTTGAGCA	8835	False	NA	NA	False	NA	NA	NA	112905756	112898347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
tx.4958	chr12	-	2552	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	37.0119217677383	194	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTGTGTTTATGTGT	NA	False	NA	NA	False	NA	NA	NA	112964261	112923704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
tx.4959	chr12	+	2239	3	FSM	ENSMUSG00000002803.15	ENSMUST00000223368.2	691	3	-304	-1244	-29	-7	multi-exon	FALSE	canonical	3	45	junction_1	3.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAATGTAGATAAGTGA	NA	False	NA	NA	False	NA	NA	NA	112940140	112942558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112940603_112940678_112940770_112940872
tx.496	chr1	+	3266	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-208	-706	-17	0	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	573	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	NA	False	NA	NA	NA	82817186	82874102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
tx.4960	chr12	+	2108	4	FSM	ENSMUSG00000002803.15	ENSMUST00000221104.2	2085	4	-28	5	-28	-5	multi-exon	FALSE	canonical	3	44	junction_3	3.55902608401044	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATGTAGATAAGTGACT	NA	False	NA	NA	False	NA	NA	NA	112940141	112942560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
tx.4961	chr12	+	5611	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-115	2	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_23	25.2377728729007	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTCTCTGAATGTGT	1264	False	NA	NA	False	NA	NA	NA	112978012	113038008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035128
tx.4962	chr12	+	5553	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-110	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	23.8944591816622	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTCTCTGAATGTGT	1269	False	NA	NA	False	NA	NA	NA	112978017	113038008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014558_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
tx.4963	chr12	+	5572	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-105	13	-105	2	multi-exon	FALSE	canonical	3	64	junction_11	15.2637802253402	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTCTCTGAATGTGT	1274	False	NA	NA	False	NA	NA	NA	112978022	113038008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
tx.4964	chr12	+	5675	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-85	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	24.5796417827871	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCTGAATGTGTTGG	1294	False	NA	NA	False	NA	NA	NA	112978042	113038011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027329_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
tx.4965	chr12	+	2830	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	-40	-1	-40	0	multi-exon	FALSE	canonical	3	192	junction_4	117.588629860953	366	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9283	False	NA	NA	False	NA	NA	NA	113061857	113100826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
tx.4966	chr12	+	2779	19	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_3	92.1761598486531	403	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9283	False	NA	NA	False	NA	NA	NA	113061857	113100826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
tx.4967	chr12	+	1163	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	275	1	-61	-1	multi-exon	FALSE	canonical	3	743	junction_5	14.1745076340121	409	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTGTCGTGTGTGT	5897	False	NA	NA	False	NA	NA	NA	113104130	113109125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
tx.4968	chr12	+	408	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	39	-2	-2	0	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGTTTTTGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	113115670	113117499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
tx.4969	chr12	+	3356	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	-11	-904	-11	-600	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	271	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	NA	NA	NA	113120029	113129068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
tx.497	chr1	+	3261	13	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-15	0	multi-exon	FALSE	canonical	3	110	junction_8	115.942843916973	121	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	NA	False	NA	NA	NA	82817188	82874102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
tx.4970	chr12	+	3977	6	NIC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	-11	-600	intron_retention	FALSE	canonical	3	190	junction_4	20.4117613154769	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	NA	NA	NA	113120029	113129068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_113120192_113120294_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
tx.4971	chr12	+	1601	2	FSM	ENSMUSG00000049036.8	ENSMUST00000058491.8	1574	2	-30	3	-30	-3	multi-exon	FALSE	canonical	3	28	junction_1	0	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGGCTATTATTCCT	822	False	NA	NA	False	NA	NA	NA	113149519	113153140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_113149579_113151598
tx.4972	chr12	+	4701	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	25	-2768	-15	0	multi-exon	FALSE	canonical	3	41	junction_2	2	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTGGTGATGTTATTG	NA	False	NA	NA	False	NA	NA	NA	116011368	116026980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_116011487_116018341_116018469_116022524
tx.4973	chr12	+	4856	4	NNC	ENSMUSG00000042063.12	novel	1958	3	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16.9771087709958	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTGATGTTATTGGGG	NA	False	NA	NA	False	NA	NA	NA	116011381	116026983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_116011487_116011678_116011844_116018341_116018469_116022524
tx.4974	chr12	-	3687	22	FSM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	36	-2	0	2	multi-exon	FALSE	canonical	3	13	junction_13	5.74791690552625	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGGGGCTTACTAAT	NA	False	NA	NA	False	NA	NA	NA	116226606	116170668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
tx.4975	chr12	-	4385	22	NNC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	7.30607177676597	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCGTCTTTGCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	116226648	116169883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219579_116219872_116221040_116221095_116226470
tx.4976	chr12	+	5550	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	14	-4	-12	4	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	366	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATGTTTTTTGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	116244829	116336715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
tx.4977	chr12	-	2479	2	FSM	ENSMUSG00000112980.2	ENSMUST00000220477.2	2941	2	23	439	23	-439	multi-exon	FALSE	canonical	2	13	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGTGTCTCGC	NA	False	NA	NA	False	NA	NA	NA	116368807	116366005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_116368264_116368586
tx.4978	chr12	-	2428	2	NNC	ENSMUSG00000112980.2	novel	2941	2	NA	NA	35	-439	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGTGTCTCGC	NA	False	NA	NA	False	NA	NA	NA	116368795	116366005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_-_116368264_116368625
tx.4979	chr12	+	6887	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-44	-201	intron_retention	FALSE	canonical	3	183	junction_1	32.2243081487453	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	NA	False	NA	NA	NA	116368977	116427150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
tx.498	chr1	+	3196	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000063380.11	2896	13	-198	-102	-10	0	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	NA	False	NA	NA	NA	82817193	82874102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
tx.4980	chr12	+	6648	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-44	-1920	-44	-200	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAGTGCCAAGAATAATA	NA	False	NA	NA	False	NA	NA	NA	116368977	116427151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
tx.4981	chr12	+	6656	29	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-24	-202	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	53.2768089073186	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	116368997	116427149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
tx.4982	chr12	+	6603	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-24	-202	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	60.3859504372009	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	116368997	116427149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr12_+_116369082_116369321_116369498_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
tx.4983	chr12	+	6449	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-22	-201	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	NA	False	NA	NA	NA	116368999	116427150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
tx.4984	chr12	+	6271	27	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-22	-199	combination_of_known_splicesites	FALSE	canonical	3	12	junction_11	63.4622377583849	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	NA	False	NA	NA	NA	116368999	116427152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
tx.4985	chr12	+	6462	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-5	-201	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	NA	False	NA	NA	NA	116369016	116427150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
tx.4986	chr12	+	6432	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-13	-7	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	53	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATACCGCTCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	117497494	117723465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
tx.4987	chr12	+	2740	10	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-150	5	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	33.9643967547428	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACCTGTCTGTGGCAT	NA	False	NA	NA	False	NA	NA	NA	117807468	117842446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
tx.4988	chr12	+	2743	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	219	-5	-150	5	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACCTGTCTGTGGCAT	NA	False	NA	NA	False	NA	NA	NA	117807468	117842446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
tx.4989	chr12	-	5716	6	FSM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-75	-2964	-3	-57	multi-exon	FALSE	canonical	2	11	junction_4	4.07921561087423	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGCCTCATTTAATTAT	NA	False	NA	NA	False	NA	NA	NA	118265178	118198724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264544_118264961
tx.499	chr1	+	3164	12	FSM	ENSMUSG00000026159.14	ENSMUST00000113444.8	3142	12	-22	0	-8	0	multi-exon	FALSE	canonical	3	50	junction_9	136.075392326071	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	NA	False	NA	NA	NA	82817195	82874102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82871144_82871304_82872196_82872289_82872719
tx.4990	chr13	+	2197	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	56	2050	-9	1	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	2020	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGTATTGAGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	3588118	3615821	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
tx.4991	chr13	-	8434	19	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	19.3591781276421	60	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	3661206	3616034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
tx.4992	chr13	-	4046	7	ISM	ENSMUSG00000033799.11	ENSMUST00000222909.2	5193	9	8875	-541	474	0	3prime_fragment	FALSE	canonical	3	65	junction_1	9.06764700582363	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	3626216	3616034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486
tx.4993	chr13	+	2385	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	20	2048	20	1288	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCCCTGTGTCTTATT	NA	False	NA	NA	False	NA	NA	NA	3684051	3701774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
tx.4994	chr13	-	3313	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	15	543	15	129	multi-exon	FALSE	canonical	3	47	junction_9	50.6888353061239	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	NA	False	NA	NA	NA	3943563	3932560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
tx.4995	chr13	-	3430	12	FSM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	22	-772	-20	129	multi-exon	FALSE	canonical	3	132	junction_9	26.5501241222916	363	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	NA	False	NA	NA	NA	3968198	3932560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
tx.4996	chr13	-	1873	9	ISM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	1617	1499	1561	-1492	3prime_fragment	FALSE	canonical	3	141	junction_4	12.5797456254091	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTGATTCCCAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	4657556	4642247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389
tx.4997	chr13	-	1556	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	19	1888	19	-1881	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACCCTACTGCCATGCG	NA	False	NA	NA	False	NA	NA	NA	4659154	4642636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
tx.4998	chr13	+	4219	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	5	1	5	-1	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	315	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGCCTGATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	5911485	5920392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
tx.4999	chr13	+	3420	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	12	474	4	-1	multi-exon	TRUE	canonical	3	407	junction_1	134.848435629472	780	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAGTTTTACTCATTAT	NA	False	NA	NA	False	NA	NA	NA	6598198	6630077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
tx.5	chr1	+	2572	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-22	-3	-22	-1	multi-exon	TRUE	canonical	3	1526	junction_2	186.842443693696	2227	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTTTTTGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	4928014	4968131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
tx.50	chr1	-	3051	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	617	32	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	145.124436401374	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	13196770	13183648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196261
tx.500	chr1	+	7586	13	NIC	ENSMUSG00000026159.14	novel	856	6	NA	NA	88	-183	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	134.385535762679	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGGCCTCTTCAAT	NA	False	NA	NA	False	NA	NA	NA	82817881	82878720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
tx.5000	chr13	+	3417	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	112.248614598533	1028	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAGTTTTACTCATTAT	NA	False	NA	NA	False	NA	NA	NA	6598198	6630077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
tx.5001	chr13	-	4918	6	FSM	ENSMUSG00000021196.15	ENSMUST00000131648.8	2680	6	-3644	1406	-3644	8	multi-exon	FALSE	canonical	3	1227	junction_2	102.634107391257	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	6139	False	NA	NA	False	NA	NA	NA	6642646	6631209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524
tx.5002	chr13	-	2729	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	10	1406	10	8	multi-exon	FALSE	canonical	3	963	junction_15	143.890705562911	1693	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	6698803	6631209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
tx.5003	chr13	-	4288	14	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	8	13	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	27.5244915145783	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGTTATTGGGAGTC	NA	False	NA	NA	False	NA	NA	NA	8921051	8853017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_8854360_8854439_8855983_8869898_8870014_8870446_8870582_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
tx.5004	chr13	-	4643	14	NIC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	59	8	intron_retention	FALSE	canonical	3	18	junction_13	18.3112472308122	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTGTGTTATTGG	NA	False	NA	NA	False	NA	NA	NA	8920956	8853022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
tx.5005	chr13	-	4448	15	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	4	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.7040624430223	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAGGTTTGTGTTATT	NA	False	NA	NA	False	NA	NA	NA	8921076	8853024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_8854360_8854439_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
tx.5006	chr13	-	4524	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	9	-7	9	7	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGGTTTGTGTTATTG	NA	False	NA	NA	False	NA	NA	NA	8921071	8853023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
tx.5007	chr13	-	3786	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	80	junction_4	6.36396103067893	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATCTGTTACAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	8921065	8900515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
tx.5008	chr13	+	2535	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	416	76	-26	-76	multi-exon	TRUE	canonical	3	487	junction_1	56.3576747213722	554	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTAATATCTGG	NA	False	NA	NA	False	NA	NA	NA	8935952	8942411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
tx.5009	chr13	-	2448	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	41	6294	8	-145	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	818	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATGACTTACATTTTG	NA	False	NA	NA	False	NA	NA	NA	9046078	9022660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
tx.501	chr1	-	3013	7	FSM	ENSMUSG00000038496.17	ENSMUST00000045560.15	2974	7	-33	-6	-33	6	multi-exon	FALSE	canonical	1	1	junction_5	3.48409082672781	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTATTTCATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	83016202	82990237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_82991711_82992423_82992566_82997052_82997246_83000054_83000863_83003946_83004102_83005733_83005864_83016090
tx.5010	chr13	+	6004	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	24	-418	-2	-45	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	456	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTGATTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	9143940	9224442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
tx.5011	chr13	+	5788	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	-77	9	-2	-9	multi-exon	FALSE	canonical	0	0	junction_12	76.8002431229876	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGCATTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	9143940	9224478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
tx.5012	chr13	+	5766	17	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	28225	-454	-14109	-9	3prime_fragment	FALSE	canonical	0	0	junction_11	76.960115481982	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGCATTTTTTTAAAG	812	False	NA	NA	False	NA	NA	NA	9172141	9224478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
tx.5013	chr13	+	4422	6	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	64698	-416	-9782	-47	3prime_fragment	FALSE	canonical	3	260	junction_1	22.0272558436134	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTTTTGATTCTTT	NA	False	NA	NA	False	NA	NA	NA	9208614	9224440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
tx.5014	chr13	+	7482	36	ISM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	216575	4	-117703	-4	3prime_fragment	TRUE	canonical	3	37	junction_1	7.0475933075463	30	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCAGTTTCTTAATT	6320	False	NA	NA	False	NA	NA	NA	9543138	9718960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_9543213_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
tx.5015	chr13	+	5271	18	ISM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	329819	6	-4459	-6	3prime_fragment	FALSE	canonical	3	44	junction_4	7.04557580388605	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAGCAGTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	9656382	9718958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
tx.5016	chr13	-	5533	2	FSM	ENSMUSG00000021156.18	ENSMUST00000137932.2	4355	2	-1173	-5	-1173	0	multi-exon	FALSE	canonical	3	141	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	9742482	9734871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_9737021_9739098
tx.5017	chr13	-	3800	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	-30	0	1	0	multi-exon	FALSE	canonical	3	61	junction_11	32.3144681539246	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	9814489	9734871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
tx.5018	chr13	-	3959	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_14	30.2476175482787	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	9814486	9734871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
tx.5019	chr13	-	3962	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110638.8	4003	14	41	0	-3	0	multi-exon	FALSE	canonical	3	27	junction_3	41.8502543239853	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	9814483	9734871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
tx.502	chr1	-	2669	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	-6	1	-6	-1	multi-exon	FALSE	canonical	3	48	junction_1	0	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAATTTTATTTATTTTTT	434	False	NA	NA	False	NA	NA	NA	84262372	84014017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_84016229_84136952_84137100_84262061
tx.5020	chr13	-	3966	14	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_13	33.3849698669589	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCTTGTCAGTAAGCT	NA	False	NA	NA	False	NA	NA	NA	9815038	9734872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
tx.5021	chr13	-	4117	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110634.8	3824	15	-34	-259	-34	0	multi-exon	FALSE	canonical	3	58	junction_14	31.2871004259139	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	9815026	9734871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
tx.5022	chr13	-	3811	14	FSM	ENSMUSG00000021156.18	ENSMUST00000062658.15	3796	14	-17	2	-17	1	multi-exon	FALSE	canonical	3	34	junction_13	37.5302639220559	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACTCTTGTCAGTAA	NA	False	NA	NA	False	NA	NA	NA	9815213	9734875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815090
tx.5023	chr13	-	4257	15	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	40.2020407645265	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACTCTTGTCAGTAAG	NA	False	NA	NA	False	NA	NA	NA	9815001	9734874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
tx.5024	chr13	-	3975	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	136	6	-18	-1	multi-exon	FALSE	canonical	3	34	junction_14	35.3204716033877	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACTCTTGTCAGTAAG	NA	False	NA	NA	False	NA	NA	NA	9815214	9734874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
tx.5025	chr13	-	6510	18	ISM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	32520	0	-25085	0	3prime_fragment	FALSE	canonical	3	145	junction_5	20.6741066341718	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTATGATGACTTTATA	3637	False	NA	NA	False	NA	NA	NA	12240461	12197597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347
tx.5026	chr13	-	8324	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-66	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.2313780599056	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTATGATGACTTT	5877	False	NA	NA	False	NA	NA	NA	12273065	12197600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210174_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
tx.5027	chr13	-	4555	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-78	3817	-60	9	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	352	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGGAGAATATATAGAG	5883	False	NA	NA	False	NA	NA	NA	12273059	12201414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
tx.5028	chr13	-	1070	7	ISM	ENSMUSG00000052374.17	ENSMUST00000168193.8	2920	22	61767	-6	3595	-3	3prime_fragment	FALSE	canonical	3	42	junction_5	11.7473401244707	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTGACAAACTTTATT	NA	False	NA	NA	False	NA	NA	NA	12293838	12284314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679
tx.5029	chr13	+	6776	45	FSM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	8	-4	8	4	multi-exon	TRUE	canonical	3	181	junction_14	60.7064258923889	544	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1722	False	NA	NA	False	NA	NA	NA	12410259	12453778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
tx.503	chr1	-	3272	13	FSM	ENSMUSG00000036766.13	ENSMUST00000049126.13	3632	13	359	1	157	-1	multi-exon	FALSE	canonical	1	6	junction_12	3.60169713082905	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTGTCTCATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	84673583	84347560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84673173
tx.5030	chr13	-	2554	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	240	-2	-3	0	multi-exon	FALSE	canonical	0	0	junction_5	18.5718491337539	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTCTCTGGAATAGT	NA	False	NA	NA	False	NA	NA	NA	12476379	12454295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
tx.5031	chr13	+	4239	15	NIC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	-5	-2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_8	25.3382223173624	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTGTTTCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	12580749	12624415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
tx.5032	chr13	+	4243	15	NNC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	25.3382223173624	112	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTCTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	12580754	12624417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605917_12610575_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
tx.5033	chr13	+	2977	2	ISM	ENSMUSG00000110123.2	ENSMUST00000209949.2	915	10	24505	-2637	24505	2637	3prime_fragment	FALSE	canonical	3	59	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTCTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	13522453	13527649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_13522733_13524951
tx.5034	chr13	-	2973	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	13568201	13532204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
tx.5035	chr13	-	3209	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-43	-815	7	0	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	13568192	13532204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
tx.5036	chr13	-	3065	8	NNC	ENSMUSG00000021306.12	novel	2351	8	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.3853332093257	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTTGTCAACTGGTG	NA	False	NA	NA	False	NA	NA	NA	13568161	13532209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_13534009_13535520_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
tx.5037	chr13	-	3813	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-3	-176	-3	-5	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGATTGCAGACTCCTG	NA	False	NA	NA	False	NA	NA	NA	13568212	13533024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
tx.5038	chr13	+	6056	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	39	-4	39	4	multi-exon	TRUE	canonical	0	0	junction_7	184.261632008595	1437	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTTTTGCTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	13612174	13686858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
tx.5039	chr13	+	3699	12	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_7	55.6602741252905	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	14129205	14173659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
tx.504	chr1	-	4261	6	ISM	ENSMUSG00000026219.15	ENSMUST00000187733.2	865	7	1006	-3379	1006	-9	3prime_fragment	FALSE	canonical	3	1142	junction_1	124.647663435782	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGTTAGTTTTGTTACT	NA	False	NA	NA	False	NA	NA	NA	84708418	84698918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252
tx.5040	chr13	+	3740	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	152	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	19.409889274617	323	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	14129205	14173659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
tx.5041	chr13	+	3543	11	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_3	63.1249554455288	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	14129205	14173659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
tx.5042	chr13	+	2388	13	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_12	55.6334107249312	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	14129203	14173659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172963
tx.5043	chr13	-	1841	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	7	-4	7	1	multi-exon	FALSE	canonical	3	97	junction_4	17.0705109399221	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTGCCCTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	14214216	14172532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
tx.5044	chr13	-	4321	13	ISM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	21836	-1	-7958	0	3prime_fragment	FALSE	canonical	3	97	junction_4	14.3817013365364	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTTCTCTGCCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	14192387	14172535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319
tx.5045	chr13	-	4319	2	ISM	ENSMUSG00000021302.11	ENSMUST00000221953.2	804	5	3817	-3615	-1190	26	3prime_fragment	FALSE	canonical	3	278	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGTACAGTATTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	14230230	14225217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_14229041_14229734
tx.5046	chr13	-	3095	3	FSM	ENSMUSG00000021302.11	ENSMUST00000222687.2	762	3	-12	-2321	-3	197	multi-exon	FALSE	canonical	2	3	junction_2	137.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTTTTTTTCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	14238006	14226232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_14229041_14229734_14229806_14237790
tx.5047	chr13	-	4130	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	74	40	-1	-40	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATACAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	14237999	14225283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
tx.5048	chr13	-	4302	5	NIC	ENSMUSG00000021302.11	novel	1340	7	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	8	junction_4	116.164484675825	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATTTCAATGTTAATT	NA	False	NA	NA	False	NA	NA	NA	14238005	14225249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234036_14237790
tx.5049	chr13	-	3316	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	1	199	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTTTTTCTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	14237993	14226230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
tx.505	chr1	-	3502	17	ISM	ENSMUSG00000026219.15	ENSMUST00000186648.7	6442	41	91999	-800	1988	800	3prime_fragment	FALSE	canonical	3	891	junction_16	139.868451030781	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	84725010	84701184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898
tx.5050	chr13	-	3372	6	NIC	ENSMUSG00000021302.11	novel	652	5	NA	NA	-2	198	intron_retention	FALSE	canonical	0	0	junction_4	117.983727691576	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	14238005	14226231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14235547_14235593_14237790
tx.5051	chr13	-	4590	6	NIC	ENSMUSG00000021302.11	novel	1340	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	8	junction_5	120.179865202121	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAATGTTAATTTGCTCA	NA	False	NA	NA	False	NA	NA	NA	14237999	14225243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233508_14233797_14233903_14234036_14237790
tx.5052	chr13	+	5770	24	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	13.4276750581372	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTTGTAGAAGGT	1426	False	NA	NA	False	NA	NA	NA	14238366	14373951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
tx.5053	chr13	+	5883	24	FSM	ENSMUSG00000039219.19	ENSMUST00000110534.8	5864	24	-14	-5	-6	0	multi-exon	FALSE	canonical	3	31	junction_17	12.735494361632	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGTTTGTAGAAGGTA	1422	False	NA	NA	False	NA	NA	NA	14238362	14373952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
tx.5054	chr13	+	3341	5	ISM	ENSMUSG00000039219.19	ENSMUST00000110534.8	5864	24	123133	0	-4252	0	3prime_fragment	FALSE	canonical	3	70	junction_2	7.90569415042095	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGATTTTGTTTGTAGA	NA	False	NA	NA	False	NA	NA	NA	14361509	14373947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
tx.5055	chr13	-	798	3	FSM	ENSMUSG00000015672.5	ENSMUST00000221699.2	1174	3	-6	382	-4	78	multi-exon	FALSE	canonical	3	41	junction_2	520.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTAATTTGTGTATTTC	NA	False	NA	NA	False	NA	NA	NA	14787616	14784879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_14785326_14786007_14786190_14787446
tx.5056	chr13	-	780	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	118	2115	-20	74	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGGATTAATTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	14787632	14784883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_14785326_14786007_14786190_14787476
tx.5057	chr13	+	849	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	15	2047	15	-2047	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	992	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	14787839	14800174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
tx.5058	chr13	+	1952	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	80	3	-14	-3	multi-exon	FALSE	canonical	3	36	junction_1	0	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGGCCTGTTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	14804818	14812785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_14804870_14810884
tx.5059	chr13	+	2008	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	12	894	12	-1	multi-exon	FALSE	canonical	3	129	junction_1	0	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCCTGTTTTTCATTG	NA	False	NA	NA	False	NA	NA	NA	14804844	14812787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_14804950_14810884
tx.506	chr1	-	2956	8	ISM	ENSMUSG00000026219.15	ENSMUST00000189670.7	2847	18	17165	-1507	-338	1507	3prime_fragment	FALSE	canonical	3	1109	junction_7	134.411339414743	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	84709833	84700477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733
tx.5060	chr13	+	8224	15	NIC	ENSMUSG00000021318.16	novel	2004	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_10	4.81970868795353	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACTGGATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	15637807	15904611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_15637994_15652584_15652750_15722984_15723228_15788363_15788470_15815653_15815860_15818878_15819026_15823105_15823308_15834546_15834761_15835465_15835580_15836974_15837116_15888083_15888234_15889534_15889700_15894639_15894931_15898024_15898353_15899045
tx.5061	chr13	+	2664	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	7	1	7	-1	multi-exon	FALSE	canonical	3	374	junction_1	0	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTACTAAACAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	17870004	17873689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_17870406_17871426
tx.5062	chr13	-	5599	14	FSM	ENSMUSG00000041297.9	ENSMUST00000223490.2	12548	14	-196	7145	-196	0	multi-exon	FALSE	canonical	3	30	junction_2	13.284773505807	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAACATTATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	17979878	17892044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
tx.5063	chr13	-	5818	14	FSM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-681	65	-235	0	multi-exon	FALSE	canonical	3	33	junction_2	12.8002403823582	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAACATTATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	17979917	17892044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_17893497_17893940_17894391_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
tx.5064	chr13	-	4100	7	ISM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-571	31933	-125	16905	5prime_fragment	FALSE	canonical	3	43	junction_3	13.208793367383	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTATTTGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	17979807	17923912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
tx.5065	chr13	-	2894	3	FSM	ENSMUSG00000041297.9	ENSMUST00000222848.2	1062	3	-1831	-1	-202	1	multi-exon	FALSE	canonical	3	79	junction_2	1	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGTTTGTAATTATTAA	NA	False	NA	NA	False	NA	NA	NA	17979884	17940816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_17941192_17946885_17947543_17978022
tx.5066	chr13	-	2664	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	17	7	17	-7	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	490	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTGGTGTTCATT	NA	False	NA	NA	False	NA	NA	NA	18118807	18055162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
tx.5067	chr13	-	3415	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	14	5315	-7	2190	multi-exon	FALSE	canonical	3	467	junction_2	27.5	289	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTCAAGACTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	18167920	18161229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_18164368_18166212_18166335_18167765
tx.5068	chr13	-	3275	2	ISM	ENSMUSG00000075054.6	ENSMUST00000222796.2	1382	3	-217	-634	8	634	intron_retention	FALSE	canonical	3	522	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTCTACATTGTAT	NA	False	NA	NA	False	NA	NA	NA	18167905	18162785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_18164368_18166212
tx.5069	chr13	+	3182	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	10	7	10	-7	multi-exon	TRUE	canonical	3	419	junction_25	60.5186237990473	936	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	NA	False	NA	NA	NA	18901469	19050974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
tx.507	chr1	-	3817	14	ISM	ENSMUSG00000026219.15	ENSMUST00000189670.7	2847	18	5291	-1507	5291	1507	3prime_fragment	FALSE	canonical	3	994	junction_9	127.224816156888	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	84721707	84700477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540
tx.5070	chr13	+	3216	21	FSM	ENSMUSG00000021314.14	ENSMUST00000003345.10	3367	21	149	2	3	-2	multi-exon	FALSE	canonical	3	40	junction_16	8.61669890387264	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTCTTTTTCAAGAG	NA	False	NA	NA	False	NA	NA	NA	19132523	19335089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
tx.5071	chr13	-	1401	10	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	323.803705207604	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	19579943	19541852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19578101_19578205_19579873
tx.5072	chr13	-	1294	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	33	0	-3	0	multi-exon	FALSE	canonical	3	699	junction_8	60.3857392105123	407	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	19579932	19541845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
tx.5073	chr13	-	1410	8	FSM	ENSMUSG00000003062.14	ENSMUST00000199278.3	1074	8	-11	-325	-7	0	multi-exon	FALSE	canonical	3	699	junction_7	61.3454587245254	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	19579936	19541845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
tx.5074	chr13	-	1159	8	FSM	ENSMUSG00000003062.14	ENSMUST00000200323.3	1128	8	-28	-3	-3	3	multi-exon	FALSE	canonical	3	54	junction_1	267.855352374968	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCCCCTGCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	19579932	19549122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
tx.5075	chr13	-	2334	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	15	14	-1	-14	multi-exon	FALSE	canonical	3	59	junction_2	5.5	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTGGTTATCTTCAGA	NA	False	NA	NA	False	NA	NA	NA	19803959	19775889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_19777519_19778616_19778826_19803463
tx.5076	chr13	+	2108	6	FSM	ENSMUSG00000021319.8	ENSMUST00000002883.7	1764	6	-348	4	-277	0	multi-exon	FALSE	canonical	2	8	junction_1	1.72046505340853	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCATGTGTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	19806996	19816995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235_19814300_19816348
tx.5077	chr13	+	3712	22	FSM	ENSMUSG00000041112.18	ENSMUST00000072519.7	5464	22	-73	1825	-50	-1825	multi-exon	FALSE	canonical	2	20	junction_15	9.13863990039136	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGGTGTTTTGATT	NA	False	NA	NA	False	NA	NA	NA	20274715	20790698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_20274942_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
tx.5078	chr13	+	2186	7	NIC	ENSMUSG00000041112.18	novel	3748	5	NA	NA	351	-1826	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	14.4308696896618	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGCTGGTGTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	20657246	20790697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_20657458_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
tx.5079	chr13	+	1874	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74255	2	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	9.14549069213894	38	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGCATAATTGTGTC	NA	False	NA	NA	False	NA	NA	NA	21120547	21208424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
tx.508	chr1	-	4098	16	ISM	ENSMUSG00000026219.15	ENSMUST00000189670.7	2847	18	4090	-1506	4090	1506	3prime_fragment	FALSE	canonical	3	994	junction_9	125.089301434349	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTGCTGACAGA	NA	False	NA	NA	False	NA	NA	NA	84722908	84700478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733
tx.5080	chr13	+	2090	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	254	1860	-39	0	multi-exon	TRUE	canonical	3	719	junction_6	36.2209771220141	1124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTTTGTTTTTGTTAT	1183	False	NA	NA	False	NA	NA	NA	21364354	21377033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
tx.5081	chr13	+	1947	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	1	2457	1	1	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGTCCTTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	21546990	21554002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
tx.5082	chr13	+	2223	4	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	16	1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	22.9927524813074	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGTCCTTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	21547017	21554002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_21547346_21547749_21548222_21550784_21550927_21552721
tx.5083	chr13	-	2567	6	FSM	ENSMUSG00000021327.20	ENSMUST00000116434.11	2600	6	26	7	2	-7	multi-exon	FALSE	canonical	3	29	junction_5	29.6486087363303	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCAGCCTGTTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	21586899	21571179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
tx.5084	chr13	-	2565	6	FSM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	-11	7	7	-7	multi-exon	FALSE	canonical	3	51	junction_5	21.2452347598232	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCAGCCTGTTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	21586894	21571179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
tx.5085	chr13	-	3492	5	ISM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	5156	7	-2794	-7	3prime_fragment	FALSE	canonical	3	91	junction_4	8.31790237980706	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCAGCCTGTTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	21581727	21571179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269
tx.5086	chr13	-	2819	6	NIC	ENSMUSG00000021327.20	novel	2561	6	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	37.8386046254351	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCAGCCTGTTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	21586868	21571179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586561
tx.5087	chr13	-	4356	6	FSM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	5	5	5	-5	multi-exon	FALSE	canonical	2	8	junction_3	4.81663783151692	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACCTGCATTATTGAGG	NA	False	NA	NA	False	NA	NA	NA	21637895	21626354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_21630000_21631955_21632065_21632336_21632655_21633443_21633504_21633610_21633687_21637747
tx.5088	chr13	-	3147	5	NIC	ENSMUSG00000022228.15	novel	4366	6	NA	NA	12	-889	intron_retention	FALSE	canonical	3	7	junction_2	5.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTGTCCTGGAACTC	NA	False	NA	NA	False	NA	NA	NA	21637888	21627238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_21630000_21631955_21632065_21633443_21633504_21633610_21633687_21637747
tx.5089	chr13	-	7493	7	NNC	ENSMUSG00000063894.16	novel	8805	6	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.76029781788188	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGATTTTTTTGTAAT	6582	False	NA	NA	False	NA	NA	NA	21715259	21697390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_21698186_21699467_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
tx.509	chr1	-	6657	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-43	-40	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_41	271.700965464141	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7844	False	NA	NA	False	NA	NA	NA	84817075	84702024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
tx.5090	chr13	-	8773	6	FSM	ENSMUSG00000063894.16	ENSMUST00000045228.12	8805	6	31	1	-16	-1	multi-exon	FALSE	canonical	3	13	junction_1	3.97994974842648	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGATTTTTTTGTA	6582	False	NA	NA	False	NA	NA	NA	21715259	21697392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
tx.5091	chr13	+	2716	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	-13	0	-13	0	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	22129250	22144655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
tx.5092	chr13	+	2755	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	149	294	124	0	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	22129430	22144655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
tx.5093	chr13	-	2887	5	FSM	ENSMUSG00000006179.10	ENSMUST00000150547.3	1159	5	-50	-1678	-50	1300	multi-exon	FALSE	canonical	2	4	junction_2	4.63680924774785	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTCTTTTCCCAACC	NA	False	NA	NA	False	NA	NA	NA	22190632	22185042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_22186981_22187095_22187242_22187315_22187496_22189260_22189403_22190151
tx.5094	chr13	-	5146	5	FSM	ENSMUSG00000046351.12	ENSMUST00000145451.8	1261	5	42	-3927	35	-2	multi-exon	FALSE	canonical	3	23	junction_4	37.5499667110372	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGTCTCCACTATAC	9055	False	NA	NA	False	NA	NA	NA	23553329	23537274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553026
tx.5095	chr13	-	4910	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-6	-4089	1	-1	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTCCACTATACT	9014	False	NA	NA	False	NA	NA	NA	23553370	23537273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
tx.5096	chr13	-	4839	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	4	1	-3	-1	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTCCACTATACT	9010	False	NA	NA	False	NA	NA	NA	23553374	23537273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
tx.5097	chr13	-	4904	4	FSM	ENSMUSG00000046351.12	ENSMUST00000152557.8	986	4	9	-3927	9	-1	multi-exon	FALSE	canonical	3	23	junction_3	48.1940521918075	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTCCACTATACT	9223	False	NA	NA	False	NA	NA	NA	23553161	23537273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553026
tx.5098	chr13	-	5110	6	NNC	ENSMUSG00000046351.12	novel	1261	5	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	48.6028805730689	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTGTCTCCACTATA	9220	False	NA	NA	False	NA	NA	NA	23553164	23537275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_23541884_23543467_23543598_23546749_23546825_23546972_23547046_23552289_23552376_23553026
tx.5099	chr13	-	1284	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	-10	3182	-10	-3182	multi-exon	FALSE	canonical	3	221	junction_1	5.5	197	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTTTAGTTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	23608046	23605712	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_23606506_23606652_23606853_23607755
tx.51	chr1	-	4077	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-228	-32	-228	32	intron_retention	FALSE	canonical	3	343	junction_5	37.0135110466435	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	13197615	13183648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
tx.510	chr1	-	6268	38	ISM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	53172	2274	-1834	801	3prime_fragment	FALSE	canonical	3	676	junction_25	186.064775826878	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	2189	False	NA	NA	False	NA	NA	NA	84763853	84701183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811
tx.5100	chr13	-	3298	2	Genic_Genomic	ENSMUSG00000113440.2	novel	4114	1	NA	NA	4	2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTTTATTAGCTTATA	NA	False	NA	NA	False	NA	NA	NA	23630101	23625989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr13_-_23628922_23629735
tx.5101	chr13	-	2913	8	FSM	ENSMUSG00000053216.16	ENSMUST00000110432.2	2089	8	9	-833	2	621	multi-exon	FALSE	canonical	0	0	junction_7	2.44948974278318	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATATGAACAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	23673008	23661224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_23663012_23664619_23664647_23664736_23664758_23665941_23666116_23666888_23667171_23670298_23670647_23672002_23672133_23672864
tx.5102	chr13	+	735	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	1	420	1	-420	multi-exon	FALSE	canonical	3	53	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCATGTTATATCACGT	184	False	NA	NA	False	NA	NA	NA	23868182	23876471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_23868605_23876158
tx.5103	chr13	-	5418	37	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-266	1	combination_of_known_junctions	FALSE	canonical	3	145	junction_10	17.5664523143855	33	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGACTTCTTCCAGTTC	NA	False	NA	NA	False	NA	NA	NA	24465044	24196465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
tx.5104	chr13	-	988	7	FSM	ENSMUSG00000006715.12	ENSMUST00000175689.8	723	7	-20	-245	-20	-1	multi-exon	FALSE	canonical	3	19	junction_6	596.377513735125	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGTGGAGAATTAAGTG	NA	False	NA	NA	False	NA	NA	NA	24945479	24935828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945342
tx.5105	chr13	-	979	7	FSM	ENSMUSG00000006715.12	ENSMUST00000110382.9	963	7	-17	1	-17	-1	multi-exon	FALSE	canonical	3	1483	junction_6	81.6382603658086	689	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGTGGAGAATTAAGTG	NA	False	NA	NA	False	NA	NA	NA	24945923	24935828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
tx.5106	chr13	+	4140	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-503	2212	-503	1325	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	208	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGCTACTCAGATGGATG	NA	False	NA	NA	False	NA	NA	NA	24985136	24997968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
tx.5107	chr13	-	695	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	25	1	25	-1	multi-exon	FALSE	canonical	3	260	junction_1	3	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGAAGTATTTTCTT	4842	False	NA	NA	False	NA	NA	NA	25015475	25001931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_25002175_25004697_25004883_25015208
tx.5108	chr13	+	1951	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	2	4	0	-3	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	836	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTACGACTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	25015663	25026132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
tx.5109	chr13	-	5627	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	2	18	2	-18	multi-exon	FALSE	canonical	3	44	junction_1	4.49965705140369	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTATTTCTGGGTTAAA	NA	False	NA	NA	False	NA	NA	NA	25121642	25091579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
tx.511	chr1	-	7559	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-68	801	combination_of_known_junctions	FALSE	canonical	3	154	junction_39	264.060432396011	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	7819	False	NA	NA	False	NA	NA	NA	84817100	84701183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
tx.5110	chr13	-	6490	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	45	500	45	-500	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAAGTACTCATTGAAAG	NA	False	NA	NA	False	NA	NA	NA	25204317	25171965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
tx.5111	chr13	-	7006	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	59.3461034946693	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCTGGACATTGTCAT	NA	False	NA	NA	False	NA	NA	NA	25204317	25171466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
tx.5112	chr13	+	6826	10	FSM	ENSMUSG00000035910.16	ENSMUST00000069614.7	6634	10	-200	8	49	-8	multi-exon	FALSE	canonical	3	14	junction_2	2.86744175568088	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAGTTTCACTGAGGT	NA	False	NA	NA	False	NA	NA	NA	25240035	25394681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
tx.5113	chr13	-	2610	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	15	4	-2	-4	multi-exon	FALSE	canonical	3	147	junction_3	17.6728291138937	231	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTGTGTTTATTGGA	NA	False	NA	NA	False	NA	NA	NA	30039642	29509287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
tx.5114	chr13	-	4689	7	FSM	ENSMUSG00000016477.19	ENSMUST00000221536.2	4597	7	-95	3	-95	-3	multi-exon	FALSE	canonical	3	13	junction_6	42.1689722689826	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTGGATGGATTT	NA	False	NA	NA	False	NA	NA	NA	30168469	30090560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30168110
tx.5115	chr13	-	5074	7	NIC	ENSMUSG00000016477.19	novel	5097	7	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	40.4790755274321	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTGTGGATGGATTTT	NA	False	NA	NA	False	NA	NA	NA	30170043	30090559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102761_30104096_30104209_30169282
tx.5116	chr13	-	5088	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	7	2	7	-2	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTGTGGATGGATTTT	NA	False	NA	NA	False	NA	NA	NA	30170039	30090559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
tx.5117	chr13	+	2838	13	FSM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	44	23	44	-23	multi-exon	FALSE	canonical	1	2	junction_9	4.03026742978125	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGATTCCTCATAAAAA	NA	False	NA	NA	False	NA	NA	NA	30320515	30430677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_30320746_30378518_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146_30425299_30429331
tx.5118	chr13	-	1176	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	43	144	43	-144	multi-exon	FALSE	canonical	3	2063	junction_1	0	1130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTTCTCATCTAAATT	NA	False	NA	NA	False	NA	NA	NA	30729302	30724434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_30725325_30729016
tx.5119	chr13	+	3177	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	-164	2	-62	-2	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCATGTGCAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	30843919	30895212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
tx.512	chr1	-	7749	39	ISM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	45060	1577	-693	1498	3prime_fragment	TRUE	canonical	3	676	junction_25	188.142296004132	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTTACACCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	84771965	84700486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245
tx.5120	chr13	-	4199	27	ISM	ENSMUSG00000021357.15	ENSMUST00000102946.8	4375	29	9525	1	9525	-1	3prime_fragment	FALSE	canonical	3	102	junction_19	19.0090682190425	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGTTTGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	31124756	30997902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592
tx.5121	chr13	-	4329	29	NIC	ENSMUSG00000021357.15	novel	4375	29	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_28	35.6224533640437	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTTGTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	31158051	30997901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31157978
tx.5122	chr13	-	4273	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	-18	1	-4	-1	multi-exon	FALSE	canonical	3	102	junction_19	19.2909994862811	243	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGTTTGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	31158055	30997902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
tx.5123	chr13	-	1701	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	8	4	8	-4	multi-exon	FALSE	canonical	3	65	junction_5	9.43186089804128	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACAGAGTTTGCTGTGTA	NA	False	NA	NA	False	NA	NA	NA	32522715	32003565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
tx.5124	chr13	+	2641	7	FSM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	161	junction_2	20.5081284697881	352	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTTCTTCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	32986012	33006592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33000466_33004201_33004358_33005021_33005102_33005866
tx.5125	chr13	-	1876	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	5	37	5	-37	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAATAATAAAGAATTTG	4874	False	NA	NA	False	NA	NA	NA	33035163	33026111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
tx.5126	chr13	+	2325	7	FSM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	-3	1075	-3	-1075	multi-exon	FALSE	canonical	1	2	junction_3	1.73205080756888	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATGTGATTCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	33188520	33200863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_33188679_33190515_33190694_33191988_33192127_33192750_33192869_33194669_33194813_33197844_33198001_33199429
tx.5127	chr13	+	1846	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	110	1297	-25	-1297	multi-exon	FALSE	canonical	3	32	junction_4	6.66874967458085	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATGGTCTTATTTT	NA	False	NA	NA	False	NA	NA	NA	33211508	33224570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
tx.5128	chr13	-	1351	7	FSM	ENSMUSG00000052180.16	ENSMUST00000172184.2	1327	7	-18	-6	-18	5	multi-exon	FALSE	canonical	3	68	junction_6	317.289431486984	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCGAGTGTTTTCTAGG	NA	False	NA	NA	False	NA	NA	NA	34089709	34063793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089625
tx.5129	chr13	-	1927	8	NNC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-52	6	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	408.837625569899	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGAGTGTTTTCTAGGA	NA	False	NA	NA	False	NA	NA	NA	34089205	34063792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34083641_34084186_34089090
tx.513	chr1	-	7419	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-19	798	combination_of_known_junctions	FALSE	canonical	3	32	junction_40	238.924381342717	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	8448	False	NA	NA	False	NA	NA	NA	84816471	84701186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
tx.5130	chr13	-	1396	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-65	-6	-65	6	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	467	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGAGTGTTTTCTAGGA	NA	False	NA	NA	False	NA	NA	NA	34089218	34063792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
tx.5131	chr13	-	1221	6	NIC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-65	6	combination_of_known_splicesites	FALSE	canonical	3	94	junction_5	331.741827329627	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGAGTGTTTTCTAGGA	NA	False	NA	NA	False	NA	NA	NA	34089218	34063792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34089090
tx.5132	chr13	-	1485	8	FSM	ENSMUSG00000060147.16	ENSMUST00000076532.14	1504	8	16	3	-8	-3	multi-exon	FALSE	canonical	3	10	junction_7	178.591998815222	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTCTGTCTGCCTCAC	NA	False	NA	NA	False	NA	NA	NA	34186761	34101903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34180225_34180335_34186652
tx.5133	chr13	-	1546	7	ISM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	226	9	-9	0	3prime_fragment	FALSE	canonical	0	0	junction_6	156.4210841145	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8598	False	NA	NA	False	NA	NA	NA	34119840	34101909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555
tx.5134	chr13	-	1486	7	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	145	0	-3	0	3prime_fragment	FALSE	canonical	3	43	junction_6	141.587134537947	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8604	False	NA	NA	False	NA	NA	NA	34119834	34101909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119609
tx.5135	chr13	-	1358	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	180	9	-22	0	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8437	False	NA	NA	False	NA	NA	NA	34120001	34101909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
tx.5136	chr13	+	3836	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	3	3	3	-3	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTCCTCTCATTTAT	NA	False	NA	NA	False	NA	NA	NA	34148672	34172423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
tx.5137	chr13	+	3910	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	-50	-2797	14	0	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTCTCATTTATATC	NA	False	NA	NA	False	NA	NA	NA	34148683	34172426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
tx.5138	chr13	+	4729	11	FSM	ENSMUSG00000091462.3_ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	30	-1493	-7	134	multi-exon	FALSE	canonical	3	34	junction_7	4.38634243989226	57	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATGTTGGCATCTCC	NA	False	NA	NA	False	NA	NA	NA	34186375	34219153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
tx.5139	chr13	+	4722	11	FSM	ENSMUSG00000091462.3_ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	36	-1492	-1	133	multi-exon	FALSE	canonical	3	34	junction_7	4.38634243989226	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCATGTTGGCATCTC	NA	False	NA	NA	False	NA	NA	NA	34186381	34219152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
tx.514	chr1	-	7423	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-68	2277	-61	798	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	253	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	7826	False	NA	NA	False	NA	NA	NA	84817093	84701186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
tx.5140	chr13	+	1216	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	36	1	1	-1	multi-exon	FALSE	canonical	3	157	junction_3	28.0356915377524	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTGTTCCTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	34221615	34258056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
tx.5141	chr13	-	1606	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	0	4	0	-4	multi-exon	FALSE	canonical	3	289	junction_2	19.2006944318862	357	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGGTCCTTTTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	34261990	34258260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
tx.5142	chr13	-	1422	2	ISM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	1372	473	1372	-473	3prime_fragment	FALSE	canonical	3	496	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCCTCTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	34312965	34311203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_34312515_34312854
tx.5143	chr13	-	1600	3	ISM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	931	473	931	-473	3prime_fragment	FALSE	canonical	3	476	junction_2	10	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCCTCTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	34313406	34311203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_34312515_34312854_34312966_34313228
tx.5144	chr13	-	1709	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	473	0	-473	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	544	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCCTCTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	34314337	34311203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
tx.5145	chr13	+	441	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	36	-3	36	-2	multi-exon	FALSE	canonical	3	173	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCATTTTACTTTGTT	NA	False	NA	NA	False	NA	NA	NA	34346982	34362154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_34347233_34361963
tx.5146	chr13	+	518	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	35	2	35	-2	multi-exon	FALSE	canonical	3	1035	junction_1	31.5	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCATTTTACTTTGTT	NA	False	NA	NA	False	NA	NA	NA	34346981	34362154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_34347233_34350043_34350120_34361963
tx.5147	chr13	-	6308	10	FSM	ENSMUSG00000038267.16	ENSMUST00000148390.3	5496	10	-823	11	-92	-11	multi-exon	FALSE	canonical	3	13	junction_3	4.97648792812415	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCTCTCCATAGCTGAT	NA	False	NA	NA	False	NA	NA	NA	34529257	34363151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140_34489245_34528141
tx.5148	chr13	-	1792	5	FSM	ENSMUSG00000038267.16	ENSMUST00000143353.2	503	5	-1054	-235	-75	235	multi-exon	FALSE	canonical	0	0	junction_1	9.86154146165801	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCATTCTCATATATTCA	NA	False	NA	NA	False	NA	NA	NA	34529240	34405117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_34405383_34405885_34406055_34482979_34483135_34489140_34489245_34528141
tx.5149	chr13	+	4449	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	207	3188	5	201	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	193	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTAGCCATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	35059491	35086859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
tx.515	chr1	-	7396	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-55	792	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	245.45286716598	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCACCATTTTTGTTTAT	7832	False	NA	NA	False	NA	NA	NA	84817087	84701192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
tx.5150	chr13	-	1227	9	FSM	ENSMUSG00000021416.12	ENSMUST00000021853.12	1347	9	-51	171	-51	-171	multi-exon	TRUE	canonical	2	6	junction_1	1.69096865730859	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATGAGTTTATGCAGG	NA	False	NA	NA	False	NA	NA	NA	35147844	35130767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_35131074_35132054_35132199_35132727_35132818_35136963_35137085_35138064_35138165_35140843_35140914_35143856_35144046_35144383_35144483_35147736
tx.5151	chr13	-	1597	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	150	-1	1	0	multi-exon	TRUE	canonical	3	47	junction_9	45.5959170795038	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178114	35161730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
tx.5152	chr13	-	1701	10	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	56.5674512702303	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178120	35161730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177812
tx.5153	chr13	-	1413	10	FSM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	13	0	1	0	multi-exon	FALSE	canonical	3	71	junction_9	38.39206450927	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178114	35161730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
tx.5154	chr13	-	1517	10	NIC	ENSMUSG00000021417.16	novel	1426	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	51.9781530555072	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178120	35161730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177996
tx.5155	chr13	+	3189	7	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2859	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_1	63.2334739060114	176	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	NA	False	NA	NA	NA	35922436	36058046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
tx.5156	chr13	+	3518	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	61	-4	61	-1	multi-exon	FALSE	canonical	3	72	junction_1	71.2031522398334	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	35925356	36058045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
tx.5157	chr13	-	2420	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	328	1390	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	192.402639041683	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCTGCAGTGATCACG	NA	False	NA	NA	False	NA	NA	NA	36089983	36079296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36089945
tx.5158	chr13	-	2724	7	NIC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	4	1	intron_retention	FALSE	canonical	3	512	junction_4	31.4624997240984	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGCTTGTTTGTTGTCA	NA	False	NA	NA	False	NA	NA	NA	36090338	36080685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36087740_36088401_36088547_36090186
tx.5159	chr13	-	1143	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	5	3232	5	0	multi-exon	FALSE	canonical	3	464	junction_5	45.6195446836425	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	36090337	36080686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
tx.516	chr1	-	6575	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9516	-16	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_40	232.548382062744	44	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGTCTGCAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	84827753	84702000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
tx.5160	chr13	+	2350	2	FSM	ENSMUSG00000050423.12	ENSMUST00000132661.2	2361	2	3	8	3	-8	multi-exon	FALSE	canonical	1	4	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAAGTATTCGGTCCCT	NA	False	NA	NA	False	NA	NA	NA	36151838	36154363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_36151966_36152140
tx.5161	chr13	-	1055	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	-32	1063	-32	-1063	multi-exon	FALSE	canonical	3	325	junction_1	9.5	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATTTATTTCCTGACA	NA	False	NA	NA	False	NA	NA	NA	36301541	36163440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_36163891_36276788_36276910_36301057
tx.5162	chr13	+	1690	7	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	85.194711625129	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	36301617	36721567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_36301777_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
tx.5163	chr13	+	1675	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	450	0	4	0	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	36301844	36721567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
tx.5164	chr13	+	4503	10	NIC	ENSMUSG00000039087.18	novel	7437	10	NA	NA	-147	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	19.6920739836559	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	NA	False	NA	NA	NA	38009803	38116669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
tx.5165	chr13	+	8516	12	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-194	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_10	28.9242384557992	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACCAACCTGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	38009756	38135981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
tx.5166	chr13	+	5535	4	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-15891	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	17.7826382244655	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACGACCAACCTGTGAG	6275	False	NA	NA	False	NA	NA	NA	38115100	38135978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_38116466_38125518_38125681_38130832_38131481_38132618
tx.5167	chr13	+	5941	4	ISM	ENSMUSG00000039087.18	ENSMUST00000037232.8	8395	12	42010	-11	-16135	0	3prime_fragment	FALSE	canonical	3	43	junction_1	7.03957069398096	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACCAACCTGTGAGTTC	6031	False	NA	NA	False	NA	NA	NA	38114856	38135981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_38116466_38125518_38125681_38130832_38131640_38132618
tx.5168	chr13	+	5723	3	ISM	ENSMUSG00000039087.18	ENSMUST00000124268.8	9702	12	42501	-1	-16081	1	3prime_fragment	FALSE	canonical	3	18	junction_1	21	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGACCAACCTGTGAGT	6085	False	NA	NA	False	NA	NA	NA	38114910	38135979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_38116466_38130832_38131640_38132618
tx.5169	chr13	+	4173	2	ISM	ENSMUSG00000039087.18	ENSMUST00000037232.8	8395	12	57981	-9	-164	1	3prime_fragment	FALSE	canonical	3	60	junction_1	0	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGACCAACCTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	38130827	38135979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_38131640_38132618
tx.517	chr1	-	7342	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-65	800	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_39	236.698919191074	90	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	7822	False	NA	NA	False	NA	NA	NA	84817097	84701184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
tx.5170	chr13	-	2676	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	46	6611	-14	-6611	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	1304	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGTTTAACTAAAAAC	5892	False	NA	NA	False	NA	NA	NA	38178147	38161987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
tx.5171	chr13	+	2479	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	257	2	7	-2	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	279	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGTTTGCATTCTTGC	4745	False	NA	NA	False	NA	NA	NA	38221227	38245407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
tx.5172	chr13	+	5741	2	ISM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	40502	1	13429	-1	3prime_fragment	FALSE	canonical	3	32	junction_1	0	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTTGTGTTTTGATTTC	NA	False	NA	NA	False	NA	NA	NA	38375771	38382552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_38377632_38378671
tx.5173	chr13	+	4395	8	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-9	87	intron_retention	FALSE	canonical	3	101	junction_4	51.7734468228489	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACACTTAGATTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	38388904	38411043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38404753_38405210_38405370_38410849
tx.5174	chr13	+	1447	5	ISM	ENSMUSG00000021431.16	ENSMUST00000223557.2	871	6	7	-187	0	187	intron_retention	FALSE	canonical	3	102	junction_4	60.6356949329353	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCACTGTGCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	38388920	38399593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580
tx.5175	chr13	+	2896	9	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	2	72	intron_retention	FALSE	canonical	1	67	junction_6	66.5450974903486	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAATTGTACACTACAC	NA	False	NA	NA	False	NA	NA	NA	38388916	38411028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
tx.5176	chr13	+	1172	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	-1	614	-1	71	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAAATTGTACACTACA	NA	False	NA	NA	False	NA	NA	NA	38388919	38411027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
tx.5177	chr13	+	3587	7	FSM	ENSMUSG00000039004.7	ENSMUST00000171970.3	3593	7	6	0	6	0	multi-exon	FALSE	canonical	1	4	junction_1	1.15470053837925	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACCAAATTGTACCACT	NA	False	NA	NA	False	NA	NA	NA	38529088	38684278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_38530564_38653589_38653783_38668866_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
tx.5178	chr13	-	2638	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	18	187	18	7	multi-exon	FALSE	canonical	3	973	junction_6	103.236992125933	1877	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTTTGCTTAAATG	NA	False	NA	NA	False	NA	NA	NA	38712448	38684241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
tx.5179	chr13	-	1748	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	26	3860	9	-3860	multi-exon	FALSE	canonical	3	63	junction_3	8.98262211161084	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATTTGAGATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	38819059	38786676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
tx.518	chr1	-	6490	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-47	-40	combination_of_known_junctions	FALSE	canonical	3	92	junction_25	242.994257905408	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7840	False	NA	NA	False	NA	NA	NA	84817079	84702024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
tx.5180	chr13	-	1030	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	41	1482	-7	-1482	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	419	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTGTTATCTTTCC	NA	False	NA	NA	False	NA	NA	NA	38842993	38829664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
tx.5181	chr13	-	1731	9	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	1	-34	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	8.40293847412915	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGTATTAATAAA	NA	False	NA	NA	False	NA	NA	NA	39144504	39116149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139624_39139913_39144407
tx.5182	chr13	-	1938	10	FSM	ENSMUSG00000021432.16	ENSMUST00000225432.2	2216	10	277	1	-10	-1	multi-exon	FALSE	canonical	3	16	junction_6	14.9004929904357	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCAAGGTGGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	39144523	39116116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144407
tx.5183	chr13	-	1767	10	FSM	ENSMUSG00000021432.16	ENSMUST00000167513.3	1778	10	8	3	-8	-3	multi-exon	FALSE	canonical	2	5	junction_9	18.3127830951868	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	NA	NA	NA	39144497	39116283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144385
tx.5184	chr13	-	1155	4	ISM	ENSMUSG00000021359.17	ENSMUST00000225180.2	1828	6	5775	-135	5775	16	3prime_fragment	FALSE	canonical	2	9	junction_3	1.24721912892465	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCTATGTCCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	40876645	40870064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_40870880_40872667_40872810_40874744_40874864_40876566
tx.5185	chr13	+	4166	3	FSM	ENSMUSG00000021360.17	ENSMUST00000110191.10	4352	3	191	-5	191	0	multi-exon	FALSE	canonical	3	38	junction_1	71.5	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	NA	False	NA	NA	NA	41013420	41114368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_41014750_41107051_41107148_41111627
tx.5186	chr13	+	4332	3	FSM	ENSMUSG00000021360.17	ENSMUST00000069958.15	3929	3	-402	-1	-402	0	multi-exon	FALSE	canonical	3	51	junction_1	65	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	NA	False	NA	NA	NA	41040266	41114368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_41041762_41107051_41107148_41111627
tx.5187	chr13	+	3989	3	FSM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	49	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	29	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	NA	False	NA	NA	NA	41071125	41114368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_41072278_41107051_41107148_41111627
tx.5188	chr13	+	1721	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	-1	2	-1	0	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	412	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGCTTAATTACATTT	NA	False	NA	NA	False	NA	NA	NA	41154497	41166489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
tx.5189	chr13	+	861	5	NIC	ENSMUSG00000021361.8	novel	914	6	NA	NA	-11	-5	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	251.069089097005	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCTGGTGTCGTCTTT	NA	False	NA	NA	False	NA	NA	NA	41169756	41176057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_41169875_41171181_41171259_41171831_41171934_41174594_41174683_41175581
tx.519	chr1	+	891	4	FSM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	9	1	-3	-1	multi-exon	FALSE	canonical	0	0	junction_1	27.3536509852382	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTTCTGGTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	84817570	84878207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_84817690_84858812_84858922_84874210_84874384_84877717
tx.5190	chr13	+	919	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	-9	4	-9	-4	multi-exon	FALSE	canonical	3	613	junction_2	43.7154434954056	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	41169758	41176058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
tx.5191	chr13	-	5067	6	ISM	ENSMUSG00000021364.17	ENSMUST00000117096.2	3797	8	23872	-4	23872	4	3prime_fragment	FALSE	canonical	3	52	junction_4	9.06421535489973	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCAACTTTTCTTAT	9232	False	NA	NA	False	NA	NA	NA	41349766	41335970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122
tx.5192	chr13	-	3983	8	FSM	ENSMUSG00000021364.17	ENSMUST00000117096.2	3797	8	-182	-4	61	4	multi-exon	FALSE	canonical	1	1	junction_7	22.3533771360785	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCAACTTTTCTTAT	7620	False	NA	NA	False	NA	NA	NA	41373820	41335970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373512
tx.5193	chr13	-	3789	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	-63	114	-63	4	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCAACTTTTCTTAT	7496	False	NA	NA	False	NA	NA	NA	41373944	41335970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
tx.5194	chr13	+	4488	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	-8	3	-8	-3	multi-exon	FALSE	canonical	3	181	junction_1	0	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACTTGTGCCTCATTGG	NA	False	NA	NA	False	NA	NA	NA	41403311	41430050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_41403791_41426041
tx.5195	chr13	+	7538	3	FSM	ENSMUSG00000087370.4	ENSMUST00000129449.3	7168	3	-370	0	-61	0	multi-exon	FALSE	canonical	3	21	junction_2	1.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCTGAACTCCTGGC	NA	False	NA	NA	False	NA	NA	NA	41759321	41794831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_41759789_41781453_41781625_41787931
tx.5196	chr13	-	1122	7	FSM	ENSMUSG00000058022.15	ENSMUST00000121404.8	1602	7	58	422	-10	3	multi-exon	FALSE	canonical	3	17	junction_6	3.97562014729219	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCTCCTGTTACTTTT	NA	False	NA	NA	False	NA	NA	NA	42001102	41918030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_41918269_41920811_41920964_41930983_41931100_41967690_41967793_41969613_41969749_41981618_41981862_42000966
tx.5197	chr13	+	6464	6	ISM	ENSMUSG00000021366.9	ENSMUST00000060148.6	8753	9	104381	0	-732	0	3prime_fragment	FALSE	canonical	3	15	junction_2	3.32264954516723	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGGTGCTTACGTCTC	2600	False	NA	NA	False	NA	NA	NA	42309877	42338502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_42313795_42316826_42316961_42317692_42317869_42321037_42321140_42334907_42335408_42336867
tx.5198	chr13	+	4126	5	FSM	ENSMUSG00000054728.18	ENSMUST00000136576.8	716	5	-297	-3113	-297	0	multi-exon	FALSE	canonical	3	6	junction_4	2.29128784747792	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTGACTCCTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	43276035	43292000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_43276531_43281613_43281676_43286395_43286537_43287402_43287480_43288649
tx.5199	chr13	-	1231	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	15	0	1	0	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTGGCCATGATG	NA	False	NA	NA	False	NA	NA	NA	43324945	43305215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
tx.52	chr1	-	3430	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-834	-32	-834	32	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	330	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	13198221	13183648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
tx.520	chr1	-	5524	5	FSM	ENSMUSG00000026220.7	ENSMUST00000027422.7	3207	5	-47	-2270	-47	2270	multi-exon	FALSE	canonical	2	5	junction_3	2.59807621135332	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGTGGTCAGTGATGT	NA	False	NA	NA	False	NA	NA	NA	84912902	84881348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_84885151_84889916_84890895_84900574_84900719_84907007_84907286_84912580
tx.5200	chr13	+	1424	9	FSM	ENSMUSG00000054021.7	ENSMUST00000223194.2	1398	9	-27	1	-17	0	multi-exon	FALSE	canonical	3	17	junction_1	63.0811729044411	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATTTTTTTGTACTT	NA	False	NA	NA	False	NA	NA	NA	43518954	43548678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
tx.5201	chr13	+	1471	9	NIC	ENSMUSG00000054021.7	novel	1579	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_8	20.7710736361893	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	NA	False	NA	NA	False	NA	NA	NA	43519104	43548679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
tx.5202	chr13	+	939	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-8	869	-8	-2	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	458	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43551857	43555468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
tx.5203	chr13	+	3342	3	FSM	ENSMUSG00000063200.5	ENSMUST00000223188.2	751	3	-2661	70	-4	-2	multi-exon	FALSE	canonical	3	1402	junction_2	86.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43551861	43555468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_43554895_43554975_43555054_43555237
tx.5204	chr13	+	745	7	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	17	-2	intron_retention	FALSE	canonical	3	1367	junction_3	68.3408532447629	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43552127	43555468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
tx.5205	chr13	-	3580	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-210	1	-210	-1	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	357	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGTGTCAGTTGAATT	NA	False	NA	NA	False	NA	NA	NA	43634968	43556151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
tx.5206	chr13	-	2145	11	ISM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-6	11261	-6	5643	5prime_fragment	FALSE	canonical	3	178	junction_9	17.9858277540957	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGTTTTTACTTGGAC	NA	False	NA	NA	False	NA	NA	NA	43634764	43567411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
tx.5207	chr13	-	4543	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	7	-15	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	86.6544863235597	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTCTTAACCTGT	NA	False	NA	NA	False	NA	NA	NA	43713660	43691883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_43695206_43697931_43698243_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
tx.5208	chr13	-	4349	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	-23	13	7	-13	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTCTTAACCTGTGT	NA	False	NA	NA	False	NA	NA	NA	43713660	43691881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
tx.5209	chr13	-	4371	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	36	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.9135529875836	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTTCTTTCTTAACCT	NA	False	NA	NA	False	NA	NA	NA	43713601	43691885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_43695206_43697931_43698047_43699163_43699303_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
tx.521	chr1	+	3808	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	335	junction_1	34.2579826463848	725	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATGTCCTTTAGAC	NA	False	NA	NA	False	NA	NA	NA	85721158	85779297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
tx.5210	chr13	+	5682	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	187.869635651959	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	8913	False	NA	NA	False	NA	NA	NA	44883278	45075113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_44883412_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
tx.5211	chr13	+	5677	19	FSM	ENSMUSG00000038518.16	ENSMUST00000173704.8	4135	19	-13	-1529	-13	-3	multi-exon	FALSE	canonical	3	41	junction_1	182.476448674857	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	9871	False	NA	NA	False	NA	NA	NA	44884236	45075113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_44884365_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
tx.5212	chr13	+	5661	19	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	185.168733528485	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	9912	False	NA	NA	False	NA	NA	NA	44884277	45075114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_44884389_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
tx.5213	chr13	+	5930	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	62	5	-35	-2	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	435	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	44884808	45075114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
tx.5214	chr13	+	4883	14	ISM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	153447	6	43935	-3	3prime_fragment	FALSE	canonical	3	632	junction_1	87.9441727165188	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	45038193	45075113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
tx.5215	chr13	+	4694	13	ISM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	165010	5	55498	-2	3prime_fragment	FALSE	canonical	3	641	junction_1	81.5701385312052	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	45049756	45075114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
tx.5216	chr13	+	4320	12	ISM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	171120	5	61608	-2	3prime_fragment	FALSE	canonical	3	687	junction_1	72.7590839519071	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	45055866	45075114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
tx.5217	chr13	-	1325	10	FSM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	37	0	-14	0	multi-exon	FALSE	canonical	3	444	junction_2	46.8187996428785	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGCAGCTGGTGAGTA	NA	False	NA	NA	False	NA	NA	NA	45155586	45075554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
tx.5218	chr13	+	3073	7	FSM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	33	junction_3	5.98377435700541	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCTTTGTGATCTTAT	4387	False	NA	NA	False	NA	NA	NA	45543209	45565498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_45543520_45544664_45544856_45557875_45558062_45559368_45559567_45560032_45560198_45561831_45562253_45563896
tx.5219	chr13	+	1660	10	NNC	ENSMUSG00000000253.14	novel	1580	9	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	25.8370965001015	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	False	NA	NA	False	NA	NA	NA	45660932	45699858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45674602_45674696_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
tx.522	chr1	+	3922	10	NIC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	161.294072357845	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGATGTCCTTTAG	NA	False	NA	NA	False	NA	NA	NA	85721159	85779295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_85721543_85723077_85723195_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
tx.5220	chr13	+	1574	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	6	0	6	0	multi-exon	FALSE	canonical	3	46	junction_4	10.0428768288773	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	False	NA	NA	False	NA	NA	NA	45660925	45699858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
tx.5221	chr13	+	3064	4	FSM	ENSMUSG00000038132.7	ENSMUST00000037923.5	3086	4	22	0	22	0	multi-exon	FALSE	canonical	1	3	junction_1	0.942809041582063	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTTGCATCAGTTATT	NA	False	NA	NA	False	NA	NA	NA	46571931	46584571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_46572675_46573750_46573875_46575326_46575382_46582429
tx.5222	chr13	+	3502	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	210	1	-67	-1	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTTTTGTTGTCAAT	NA	False	NA	NA	False	NA	NA	NA	46655533	46803756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
tx.5223	chr13	+	3716	5	FSM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	-44	-8	-44	8	multi-exon	FALSE	canonical	3	172	junction_4	10.8972473588517	341	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	NA	False	NA	NA	NA	46822953	46831540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
tx.5224	chr13	-	2896	5	ISM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	40559	-3	-3367	3	3prime_fragment	FALSE	canonical	3	327	junction_2	5.76085931090146	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCCTTTCTGTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	46840857	46833377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098
tx.5225	chr13	-	6161	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-52	0	-52	0	multi-exon	TRUE	canonical	3	242	junction_11	30.6722857910241	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACAACCCTTTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	46881468	46833380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
tx.5226	chr13	-	7037	38	NIC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	66	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_36	17.3937765416628	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTGTTGATCGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	47083277	46902566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47082691_47082783_47083042
tx.5227	chr13	-	7055	38	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	59	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	17.3937765416628	16	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTGTTGATCGTCTGT	NA	False	NA	NA	False	NA	NA	NA	47083284	46902567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
tx.5228	chr13	-	6342	36	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-96	-796	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	18.2812494549102	6	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47083439	46904784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
tx.5229	chr13	-	4891	37	NNC	ENSMUSG00000021375.12	novel	3426	26	NA	NA	-62	-9368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	19.167310778227	7	2	1	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGAAATGCCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	47083256	46913356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_46913548_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
tx.523	chr1	+	1956	6	FSM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	284	-10	-54	10	multi-exon	FALSE	canonical	3	192	junction_3	14.9853261559434	272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAACCTCTTCTGACTT	NA	False	NA	NA	False	NA	NA	NA	85822285	85836406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
tx.5230	chr13	-	2656	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	44	8	-22	-8	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTTCCTGAGCTT	NA	False	NA	NA	False	NA	NA	NA	47196642	47177026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
tx.5231	chr13	-	2660	9	NIC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	17	-8	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	30.2438010177292	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTTCCTGAGCTT	NA	False	NA	NA	False	NA	NA	NA	47196669	47177026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196602
tx.5232	chr13	+	4276	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	37	674	-34	-8	multi-exon	FALSE	canonical	3	35	junction_2	9.84682690007294	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTCCTTTCCAGTCCT	1198	False	NA	NA	False	NA	NA	NA	47197011	47238081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
tx.5233	chr13	-	2560	10	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	331	0	-29	0	3prime_fragment	FALSE	canonical	3	1428	junction_1	93.7092956902645	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	NA	False	NA	NA	NA	47259335	47238257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047
tx.5234	chr13	-	2561	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	-5	0	-5	0	multi-exon	FALSE	canonical	3	1333	junction_10	113.482333426838	1719	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	NA	False	NA	NA	NA	47259671	47238257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
tx.5235	chr13	+	2453	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-114	1510	-114	-1510	multi-exon	FALSE	canonical	3	109	junction_1	7	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGATGTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	48414589	48417992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_48415415_48415760_48415824_48416427
tx.5236	chr13	-	4110	5	NIC	ENSMUSG00000050954.16	novel	4145	5	NA	NA	7	-5	intron_retention	FALSE	canonical	0	0	junction_1	6.68487097856047	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAATTCCATCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	48666920	48641127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_48644870_48651798_48651895_48652255_48652383_48660382_48660470_48666862
tx.5237	chr13	-	4019	3	FSM	ENSMUSG00000038042.12	ENSMUST00000221887.2	1072	3	-1455	-1492	-1455	3	multi-exon	TRUE	canonical	3	14	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTCTTGTGGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	48738493	48731344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_48733320_48734230_48734342_48736560
tx.5238	chr13	-	4598	11	FSM	ENSMUSG00000038042.12	ENSMUST00000222028.2	3164	11	-93	-1341	-10	3	multi-exon	FALSE	canonical	0	0	junction_8	6.6340033162488	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTCTTGTGGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	48779150	48731344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48751233_48751417_48759748_48759837_48778852
tx.5239	chr13	-	4385	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	18	-1	18	1	multi-exon	FALSE	canonical	3	9	junction_8	3.87138919781874	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCCGTCTTGTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	48779122	48731346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
tx.524	chr1	+	3232	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	24	-144	2	144	multi-exon	FALSE	canonical	3	1352	junction_6	102.249660417801	2919	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTAGTTGATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	85992364	86067017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
tx.5240	chr13	-	4467	17	ISM	ENSMUSG00000038025.9	ENSMUST00000035540.9	5494	22	48055	0	48055	0	3prime_fragment	TRUE	canonical	3	26	junction_1	6.44174617242872	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTCTGTCGTGCTT	NA	False	NA	NA	False	NA	NA	NA	48976540	48955225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961353_48966384_48966546_48967178_48967250_48967341_48967521_48969430_48969547_48969910_48970031_48970981_48971342_48971777_48971868_48973015_48973108_48973516_48973624_48974001_48974090_48975006_48975170_48976424
tx.5241	chr13	-	5309	22	FSM	ENSMUSG00000038025.9	ENSMUST00000035540.9	5494	22	184	1	184	-1	multi-exon	FALSE	canonical	3	26	junction_1	5.86043268042677	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATGTGTCTGTCGTGCT	NA	False	NA	NA	False	NA	NA	NA	49024411	48955226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961353_48966384_48966546_48967178_48967250_48967341_48967521_48969430_48969547_48969910_48970031_48970981_48971342_48971777_48971868_48973015_48973108_48973516_48973624_48974001_48974090_48975006_48975170_48976424_48976612_48979527_48979670_48982261_48982423_48985479_48985595_48988685_48988772_49024143
tx.5242	chr13	-	3936	3	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	80322	-3	80322	3	3prime_fragment	FALSE	canonical	3	288	junction_2	4.5	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGTGGCTTTTAAAT	2751	False	NA	NA	False	NA	NA	NA	49041171	49032691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_49034572_49038748_49038846_49039212
tx.5243	chr13	-	5355	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-247	-3	-247	3	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	416	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGTGGCTTTTAAAT	6136	False	NA	NA	False	NA	NA	NA	49121740	49032691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
tx.5244	chr13	-	8597	17	NIC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-244	3	intron_retention	FALSE	canonical	3	179	junction_7	32.3553873991643	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGTGGCTTTTAAAT	6139	False	NA	NA	False	NA	NA	NA	49121737	49032691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_49034572_49038748_49038846_49039212_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
tx.5245	chr13	-	3004	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-259	30384	-259	-30384	5prime_fragment	FALSE	canonical	3	223	junction_3	19.2725737452327	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAACAGAGTCTAATGT	6124	False	NA	NA	False	NA	NA	NA	49121752	49063078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
tx.5246	chr13	+	1443	2	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTGCTTTCCCTGTT	NA	False	NA	NA	False	NA	NA	NA	49121605	49123381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_49122081_49122413
tx.5247	chr13	+	1187	4	FSM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	7	-7	7	7	multi-exon	FALSE	canonical	3	352	junction_2	21.013223349966	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATGTGCCACCCTATA	NA	False	NA	NA	False	NA	NA	NA	49340967	49349727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_49341114_49347211_49347441_49348369_49348534_49349079
tx.5248	chr13	-	961	5	NIC	ENSMUSG00000037960.12	novel	804	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	362	junction_4	11.146748404804	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	NA	False	NA	NA	NA	49369519	49356425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_49356712_49357193_49357465_49358667_49358822_49361479_49361623_49369412
tx.5249	chr13	-	816	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	-11	-1	0	0	multi-exon	FALSE	canonical	3	362	junction_5	10.4115320678563	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	NA	False	NA	NA	NA	49369513	49356425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
tx.525	chr1	+	3427	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	-4	1273	0	-1273	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGCCTACAGAGTA	NA	False	NA	NA	False	NA	NA	NA	86082501	86186276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
tx.5250	chr13	-	1143	5	FSM	ENSMUSG00000021384.15	ENSMUST00000058196.13	1418	5	136	139	-4	0	multi-exon	FALSE	canonical	2	5	junction_4	5.02493781056044	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAGCCACCTTATCATC	NA	False	NA	NA	False	NA	NA	NA	49401634	49384304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_49384808_49390899_49391089_49392264_49392413_49393958_49394148_49401520
tx.5251	chr13	+	6344	7	FSM	ENSMUSG00000037933.17	ENSMUST00000048544.14	6309	7	-28	-7	-28	0	multi-exon	FALSE	canonical	3	26	junction_2	11.1616904335021	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCCCTCTGTGATTGC	1400	False	NA	NA	False	NA	NA	NA	49495032	49540502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518
tx.5252	chr13	+	4619	8	FSM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	-32	1	-21	0	multi-exon	FALSE	canonical	3	26	junction_2	11.2213353638031	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGTGCCCTCTGTGATTG	1407	False	NA	NA	False	NA	NA	NA	49495039	49540501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
tx.5253	chr13	+	4703	9	NIC	ENSMUSG00000037933.17	novel	4588	8	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_8	20.4110111214511	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGTGCCCTCTGTGATT	1410	False	NA	NA	False	NA	NA	NA	49495042	49540500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49537813_49537902_49538446
tx.5254	chr13	+	1936	6	ISM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-17	26495	-17	-24823	5prime_fragment	FALSE	canonical	3	117	junction_2	18.7659265691838	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTCTGGAAGGGCAGCC	NA	False	NA	NA	False	NA	NA	NA	49574707	49591554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186
tx.5255	chr13	+	2843	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-6	1584	-6	-1	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTATAGAGTTTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	49574718	49616465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
tx.5256	chr13	-	6705	7	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	1	5205	intron_retention	FALSE	canonical	3	162	junction_5	23.8793262514298	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACCTGTGAAAACAAGTA	NA	False	NA	NA	False	NA	NA	NA	49806260	49612293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
tx.5257	chr13	-	1136	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	10	-2	-8	2	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGCTTTGTACAGTTAA	NA	False	NA	NA	False	NA	NA	NA	49806251	49617496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
tx.5258	chr13	-	1058	7	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	68.711959172573	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATAGTGCTTTGTACAG	NA	False	NA	NA	False	NA	NA	NA	49806266	49617500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49803596_49803776_49806058
tx.5259	chr13	+	4377	34	FSM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	44	5	14	-5	multi-exon	FALSE	canonical	1	598	junction_17	241.366305222171	2969	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGTTGGAAGTAGTTA	NA	False	NA	NA	False	NA	NA	NA	49835619	49887738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
tx.526	chr1	+	2198	21	FSM	ENSMUSG00000062590.14	ENSMUST00000131412.8	2160	21	-34	-4	1	4	multi-exon	FALSE	canonical	3	78	junction_14	12.2982722363753	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCTTTATTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	86082502	86180215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998
tx.5260	chr13	+	1829	10	FSM	ENSMUSG00000037816.11	ENSMUST00000046974.5	1798	10	-25	-6	-25	-1	multi-exon	FALSE	canonical	3	14	junction_8	4.29469957557504	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACATTCCTGCATGAACT	NA	False	NA	NA	False	NA	NA	NA	50571874	50587811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
tx.5261	chr13	+	4528	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	289.12599329704	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	NA	NA	NA	51254898	51306584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_51255102_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
tx.5262	chr13	+	4471	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	-35	-2	-35	2	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	965	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	NA	NA	NA	51254880	51306584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
tx.5263	chr13	+	4606	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	351	2	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	296.576735432839	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	NA	NA	NA	51255266	51306584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_51255548_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
tx.5264	chr13	+	4329	5	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	22204	-2	-11235	2	3prime_fragment	FALSE	canonical	3	718	junction_3	64.5653738469778	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	NA	NA	NA	51277119	51306584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
tx.5265	chr13	+	3701	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	95	667	95	-667	multi-exon	FALSE	canonical	3	36	junction_1	0	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAGGCCTGTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	51562769	51576166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_51562982_51572677
tx.5266	chr13	+	4717	2	NIC	ENSMUSG00000062248.6	novel	692	3	NA	NA	88	0	intron_retention	FALSE	canonical	3	3514	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGTTGAAATTAATTTG	NA	False	NA	NA	False	NA	NA	NA	51799355	51804696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_51803749_51804372
tx.5267	chr13	+	602	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	87	3	87	-3	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	404	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCATTGTTGAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	51799354	51804693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_51799508_51803620_51803749_51804372
tx.5268	chr13	+	3307	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	21	0	21	0	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5515	False	NA	NA	False	NA	NA	NA	51805753	51838080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
tx.5269	chr13	-	4452	16	FSM	ENSMUSG00000021451.17	ENSMUST00000021900.14	4482	16	29	1	29	-1	multi-exon	TRUE	canonical	3	95	junction_9	25.4317387005555	327	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCAGCCTTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	51947754	51855282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
tx.527	chr1	+	3359	9	NNC	ENSMUSG00000062590.14	novel	1733	9	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.6927700644146	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCAGGCTGGTGTATAT	NA	False	NA	NA	False	NA	NA	NA	86082528	86105428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86102926
tx.5270	chr13	-	4384	15	NIC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_14	50.6785085069578	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCAGCCTTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	51947755	51855282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51947532
tx.5271	chr13	-	4515	17	FSM	ENSMUSG00000021451.17	ENSMUST00000110040.9	4472	17	-45	2	29	-2	multi-exon	FALSE	canonical	3	16	junction_15	57.0268234583516	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCCAGCCTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	51947754	51855283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51888542_51888607_51917287_51917357_51947532
tx.5272	chr13	+	1078	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	0	-7	0	7	multi-exon	FALSE	canonical	3	52	junction_3	4.02768199119819	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCCTTTTTATTGAG	NA	False	NA	NA	False	NA	NA	NA	52000713	52002511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
tx.5273	chr13	+	5293	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTGTGATGACCTTTA	NA	False	NA	NA	False	NA	NA	NA	52737198	52802817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
tx.5274	chr13	+	5316	14	FSM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	38	9	38	1	multi-exon	FALSE	canonical	3	17	junction_6	22.2489943925403	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGATGACCTTTACG	NA	False	NA	NA	False	NA	NA	NA	52737246	52802819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
tx.5275	chr13	+	2678	12	NIC	ENSMUSG00000021457.15	novel	2519	13	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.5124625838599	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGAACAATCTCTGAGC	NA	False	NA	NA	False	NA	NA	NA	52737209	52797643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
tx.5276	chr13	+	2437	14	NIC	ENSMUSG00000021457.15	novel	5122	14	NA	NA	1	-84	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	30.3336476130846	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTTGTGATCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	52737539	52797566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_52737642_52750993_52751091_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
tx.5277	chr13	-	1322	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	269	junction_3	77.7090172246741	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTTATACCAAATGT	NA	False	NA	NA	False	NA	NA	NA	53083699	52989154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
tx.5278	chr13	-	2648	4	FSM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	-17	-4	10	4	multi-exon	FALSE	canonical	3	17	junction_1	210.944437128727	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTGCTCTCTCACTGA	NA	False	NA	NA	False	NA	NA	NA	53083707	53061076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_53063352_53073036_53073125_53073234_53073303_53083490
tx.5279	chr13	-	3223	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	11	1	-9	-1	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCTCTTGGTCACAGTG	NA	False	NA	NA	False	NA	NA	NA	53083706	53064246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
tx.528	chr1	+	2367	2	FSM	ENSMUSG00000079445.4	ENSMUST00000113306.4	2582	2	209	6	-88	-6	multi-exon	FALSE	canonical	3	186	junction_1	0	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATTAGCTGCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	86231164	86235021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_86231277_86232766
tx.5280	chr13	-	2038	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	-12	0	-12	0	multi-exon	FALSE	canonical	3	64	junction_1	0	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCTGTTCCACTT	NA	False	NA	NA	False	NA	NA	NA	53135121	53121244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_53123058_53134896
tx.5281	chr13	-	4007	9	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-58	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	39.2651244745257	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTATTATCTCTG	NA	False	NA	NA	False	NA	NA	NA	53440218	53263354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_53265705_53267083_53267287_53271204_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
tx.5282	chr13	-	4038	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	-53	0	-53	0	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATTATCTCTGGG	NA	False	NA	NA	False	NA	NA	NA	53440213	53263352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
tx.5283	chr13	-	2571	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	31	4	-1	-4	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	240	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAGTCTGTTTGGATA	1860	False	NA	NA	False	NA	NA	NA	53531402	53486787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
tx.5284	chr13	-	3386	3	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	37703	5	37654	-5	3prime_fragment	FALSE	canonical	3	189	junction_1	0.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGAGTCTGTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	53493730	53486788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_53488014_53489376_53489451_53491643
tx.5285	chr13	-	2231	2	FSM	ENSMUSG00000021469.10	ENSMUST00000021922.10	2453	2	225	-3	225	3	multi-exon	FALSE	canonical	3	8	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTGTCCCAACTCACA	NA	False	NA	NA	False	NA	NA	NA	53626885	53620916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_53622630_53626367
tx.5286	chr13	+	2801	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	-18	0	-18	0	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	1479	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTCTCTTACTTGTC	NA	False	NA	NA	False	NA	NA	NA	54225869	54262361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
tx.5287	chr13	-	2908	3	NNC	ENSMUSG00000113404.2	novel	2746	2	NA	NA	-3265	6	intron_retention	FALSE	canonical	1	2	junction_2	1.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGTGTTTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	54485164	54463917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_54466497_54481726_54481884_54484992
tx.5288	chr13	-	2319	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	16	0	-7	0	multi-exon	FALSE	canonical	3	501	junction_3	36.0699320764539	642	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGTCTAAAGTTACTA	NA	False	NA	NA	False	NA	NA	NA	54616646	54606649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
tx.5289	chr13	+	4819	10	FSM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	7.33333333333333	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGACTCCAGGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	54651591	54699103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
tx.529	chr1	-	2000	12	ISM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	2070	5768	1639	8	3prime_fragment	FALSE	canonical	3	5903	junction_8	870.888621888894	391	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACTTCCTAGAGGTTA	NA	False	NA	NA	False	NA	NA	NA	86285052	86278208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678
tx.5290	chr13	-	2641	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	81	5	2	0	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	221	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	54713167	54699035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
tx.5291	chr13	-	2641	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	81	5	2	0	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	363	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	54713167	54699035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
tx.5292	chr13	-	2553	8	FSM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	-51	0	2	0	multi-exon	FALSE	canonical	3	41	junction_6	177.014469603419	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	54713167	54699035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327_54712435_54712994
tx.5293	chr13	-	2140	5	FSM	ENSMUSG00000025871.19	ENSMUST00000153708.2	946	5	-21	-1173	2	0	multi-exon	FALSE	canonical	3	31	junction_4	214.957408572024	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	54713167	54699035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712994
tx.5294	chr13	+	4252	4	NIC	ENSMUSG00000025870.11	novel	1046	4	NA	NA	13	1637	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	37.8623236946117	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAAGTGACTTTACTTG	2687	False	NA	NA	False	NA	NA	NA	54722840	54730578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_54723091_54723562_54723762_54726605_54726782_54726951
tx.5295	chr13	+	2657	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	24	-1635	-8	1635	multi-exon	FALSE	canonical	3	59	junction_3	14.6363322667334	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGAAGTGACTTTACT	2698	False	NA	NA	False	NA	NA	NA	54722851	54730576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
tx.5296	chr13	-	1093	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	18	645	-14	-294	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	399	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGTGGGTTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	54737885	54732642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
tx.5297	chr13	+	634	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	5	9	5	-9	multi-exon	FALSE	canonical	3	1416	junction_1	0	182	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGAACTATTTCTTAA	5983	False	NA	NA	False	NA	NA	NA	54738024	54738962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_54738233_54738536
tx.5298	chr13	-	2164	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	-7	29	-7	-29	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATACCAGTATTACTGGA	7398	False	NA	NA	False	NA	NA	NA	54759164	54740242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
tx.5299	chr13	+	4301	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	18	3	1	-3	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	54769614	54811873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
tx.53	chr1	-	8256	23	FSM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	-10	-3349	-10	-21	multi-exon	FALSE	canonical	3	44	junction_3	7.80826538127789	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGCTTTAGAGATTTTA	NA	False	NA	NA	False	NA	NA	NA	13444317	13209349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
tx.530	chr1	-	2406	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	25	5771	-11	5	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	8264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTAATACTTCCTAGAGG	NA	False	NA	NA	False	NA	NA	NA	86287097	86278211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
tx.5300	chr13	+	4254	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	-32	-2474	8	-3	multi-exon	TRUE	canonical	3	159	junction_3	87.926617130423	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	54769604	54811873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
tx.5301	chr13	+	4156	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	175.481418945317	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	54769620	54811873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
tx.5302	chr13	+	4368	12	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	187.610022816365	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	54769622	54811873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
tx.5303	chr13	-	3886	11	FSM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	53	2	53	0	multi-exon	FALSE	canonical	3	234	junction_10	160.927934181732	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	54835568	54827213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
tx.5304	chr13	-	3909	11	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	234	junction_10	182.338257093787	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	54835588	54827213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54835306
tx.5305	chr13	-	3764	11	FSM	ENSMUSG00000034928.17	ENSMUST00000037422.16	3734	11	-21	-9	-18	0	multi-exon	FALSE	canonical	3	393	junction_7	120.344339293546	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	54841681	54827213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
tx.5306	chr13	-	1404	7	NNC	ENSMUSG00000034891.14	novel	1351	6	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.2679941957663	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	54914347	54906672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54913637_54913752_54914117
tx.5307	chr13	-	1335	6	FSM	ENSMUSG00000034891.14	ENSMUST00000036825.14	1351	6	16	0	16	0	multi-exon	FALSE	canonical	0	0	junction_2	35.7636687156114	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	54914392	54906672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54914117
tx.5308	chr13	+	1138	9	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	98	junction_8	99.0959131347	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGTTTATGTTCACC	NA	False	NA	NA	False	NA	NA	NA	54937255	54944587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
tx.5309	chr13	+	1358	6	FSM	ENSMUSG00000025875.15	ENSMUST00000163796.8	712	6	-60	-586	0	-2	multi-exon	FALSE	canonical	2	9	junction_1	159.188441791482	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGTTTATGTTCAC	NA	False	NA	NA	False	NA	NA	NA	54937215	54944586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_54937495_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
tx.531	chr1	+	1206	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	-5	15	-5	-15	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	11292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTGTCTCAAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	86454442	86458419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
tx.5310	chr13	+	1518	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	64	3	-22	-2	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	212	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGTTTATGTTCAC	NA	False	NA	NA	False	NA	NA	NA	54937253	54944586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
tx.5311	chr13	+	1394	7	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	15	junction_6	140.730731856581	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGTTTATGTTCAC	NA	False	NA	NA	False	NA	NA	NA	54937260	54944586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943969
tx.5312	chr13	+	1814	7	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	379	junction_1	14.3488288333539	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGTTTATGTTCAC	NA	False	NA	NA	False	NA	NA	NA	54937265	54944586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
tx.5313	chr13	+	3482	2	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTATTGTATTTGATG	NA	False	NA	NA	False	NA	NA	NA	54969157	54978459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_54969309_54975128
tx.5315	chr13	+	3862	15	FSM	ENSMUSG00000025876.16	ENSMUST00000109994.9	3827	15	-35	0	-35	0	multi-exon	TRUE	canonical	1	4	junction_1	2.26778683805536	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGAGTGTCGCTTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	55097188	55153831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55097545_55138692_55138915_55143609_55143754_55143972_55144077_55144216_55144398_55145728_55145894_55147148_55147338_55147434_55147738_55150278_55150367_55150645_55150815_55150995_55151230_55151354_55151505_55151590_55151756_55152290_55152470_55152618
tx.5316	chr13	-	1896	10	ISM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	24362	404	10259	11	3prime_fragment	FALSE	canonical	3	94	junction_9	14.7254713395816	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATAGATGGAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	55223746	55176096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070
tx.5317	chr13	-	2502	15	FSM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	25	404	-16	11	multi-exon	FALSE	canonical	0	0	junction_10	39.2030949423795	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATAGATGGAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	55248083	55176096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
tx.5318	chr13	+	3636	7	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-14	225	intron_retention	FALSE	canonical	3	20	junction_4	17.8013732304249	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAACAAACAAAAATAGT	5180	False	NA	NA	False	NA	NA	NA	55253109	55282863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55278346_55278441_55280119
tx.5319	chr13	+	3588	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	-24	-231	-8	231	multi-exon	FALSE	canonical	3	43	junction_4	9.82202739877171	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAAAAATAGTCTGTCT	5186	False	NA	NA	False	NA	NA	NA	55253115	55282869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
tx.532	chr1	+	1524	4	ISM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	1900	14	1819	-14	3prime_fragment	FALSE	canonical	3	19621	junction_1	2007.4056778727	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGTCTCAAAGCCTGG	NA	False	NA	NA	False	NA	NA	NA	86456347	86458420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_86456967_86457177_86457275_86457452_86457527_86457686
tx.5320	chr13	+	3175	18	FSM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	130	19	130	-19	multi-exon	FALSE	canonical	2	5	junction_4	3.40364144505634	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTGTGCCTGGTGGCT	NA	False	NA	NA	False	NA	NA	NA	55300582	55316553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55300741_55303250_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
tx.5321	chr13	+	12039	24	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	36	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	55357594	55466136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
tx.5322	chr13	+	9514	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-115	-3	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	47.9836534862692	11	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTATCATGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	55359516	55463565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
tx.5323	chr13	+	7885	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-16	-1728	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCACTGGTCAACTTGG	NA	False	NA	NA	False	NA	NA	NA	55359615	55461840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
tx.5324	chr13	+	7855	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-27	-1731	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTCCACTGGTCAACT	NA	False	NA	NA	False	NA	NA	NA	55359604	55461837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
tx.5325	chr13	+	10641	19	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	36527	2	-17116	-2	3prime_fragment	FALSE	canonical	3	160	junction_18	24.9002950054417	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	55394121	55466136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
tx.5326	chr13	-	1467	6	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-22	1	intron_retention	FALSE	canonical	3	480	junction_5	51.3949413853153	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCACTGGGTGTCAAAA	6419	False	NA	NA	False	NA	NA	NA	55469781	55467691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202
tx.5327	chr13	-	1859	3	ISM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	-23	0	-22	0	intron_retention	FALSE	canonical	3	549	junction_1	45	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6419	False	NA	NA	False	NA	NA	NA	55469781	55467697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_55468028_55468124_55468188_55468315
tx.5328	chr13	-	1177	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	-4	-5	-3	0	multi-exon	FALSE	canonical	3	320	junction_3	95.4118890465364	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCACTGGGTGTCAAA	6438	False	NA	NA	False	NA	NA	NA	55469762	55467692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
tx.5329	chr13	-	1382	7	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	458	junction_6	60.0101843208486	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGCACTGGGTGTCAA	6423	False	NA	NA	False	NA	NA	NA	55469777	55467693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
tx.533	chr1	+	3529	2	NIC	ENSMUSG00000026238.15	novel	768	4	NA	NA	202	-15	intron_retention	FALSE	canonical	3	24081	junction_1	0	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTGTCTCAAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	86454730	86458419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_86457527_86457686
tx.5330	chr13	+	1117	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1527	0	8	0	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	631	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5561	False	NA	NA	False	NA	NA	NA	55469839	55473085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
tx.5331	chr13	-	1340	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	-23	10	-23	-10	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTCTTGGAGCGTACA	6132	False	NA	NA	False	NA	NA	NA	55477594	55472990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
tx.5332	chr13	-	2586	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	166	1563	-6	1197	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	1878	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGGCTGATGGTCTCT	3005	False	NA	NA	False	NA	NA	NA	55510430	55493208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
tx.5333	chr13	-	205	2	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	4705	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGTATATATTCTCTT	NA	False	NA	NA	False	NA	NA	NA	55538393	55538007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_-_55538163_55538343
tx.5334	chr13	+	3015	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224118.2	1997	16	-146	-872	-23	0	multi-exon	FALSE	canonical	3	104	junction_15	96.0563723376365	242	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	55593127	55608740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
tx.5335	chr13	-	2926	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	-34	-514	16	-1	multi-exon	FALSE	canonical	3	24	junction_2	11.9649389180894	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCGGGCCTGCTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	55635908	55621242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
tx.5336	chr13	-	2659	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	2	279	2	236	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCTCTTTACCCTCGC	NA	False	NA	NA	False	NA	NA	NA	55635922	55621520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
tx.5337	chr13	-	1689	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	10	-2	1	-2	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	NA	False	NA	NA	NA	55661249	55646226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
tx.5338	chr13	-	1005	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	1	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	27.1751687376246	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	False	NA	NA	False	NA	NA	NA	55661250	55654585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
tx.5339	chr13	-	2073	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	126	0	-11	0	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	932	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	NA	False	NA	NA	NA	55684345	55678228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
tx.534	chr1	-	1126	5	FSM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	12	21	12	7	multi-exon	FALSE	canonical	3	312	junction_1	25.5391855782443	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGATGCTTCCATCTCCT	NA	False	NA	NA	False	NA	NA	NA	86510257	86470736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475250_86475340_86510021
tx.5340	chr13	-	1480	4	ISM	ENSMUSG00000021495.11	ENSMUST00000224486.2	4786	5	8637	-3	-225	0	3prime_fragment	FALSE	canonical	3	159	junction_3	6.0184900284226	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	NA	False	NA	NA	NA	55691505	55687128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596
tx.5341	chr13	-	6611	5	FSM	ENSMUSG00000021495.11	ENSMUST00000224486.2	4786	5	-1822	-3	-1822	0	multi-exon	FALSE	canonical	3	92	junction_4	31.8943568676341	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	NA	False	NA	NA	NA	55701964	55687128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930
tx.5342	chr13	-	4369	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	51.3880070904416	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	NA	False	NA	NA	NA	55718915	55687128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
tx.5343	chr13	-	4222	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	56.6982734735021	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	NA	False	NA	NA	NA	55718889	55687128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701042_55702029_55702262_55703795_55704039_55712332_55712394_55717517
tx.5344	chr13	-	4312	11	FSM	ENSMUSG00000021495.11	ENSMUST00000021957.8	4341	11	28	1	8	-1	multi-exon	FALSE	canonical	3	48	junction_9	46.3227805728456	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	NA	False	NA	NA	NA	55718905	55687129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
tx.5345	chr13	-	5199	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	6	1	intron_retention	FALSE	canonical	3	48	junction_8	45.9511280910437	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTATGATGGTGATT	NA	False	NA	NA	False	NA	NA	NA	55718927	55687130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
tx.5346	chr13	+	1429	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	-9	0	2	0	multi-exon	FALSE	canonical	3	616	junction_1	31.3847096529504	448	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740972	55745510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
tx.5347	chr13	+	3068	5	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	-18	0	intron_retention	FALSE	canonical	3	87	junction_3	9.49670995661129	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	NA	False	NA	NA	NA	55747859	55758256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_55748006_55751832_55752196_55755009_55756239_55756510_55756616_55757031
tx.5348	chr13	+	2033	6	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	32.2391066873758	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGGCAAGGAACTGG	NA	False	NA	NA	False	NA	NA	NA	55747874	55758255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_55748006_55751932_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
tx.5349	chr13	+	2135	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	-4	-1	-4	0	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	NA	False	NA	NA	NA	55747873	55758256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
tx.535	chr1	+	1865	6	FSM	ENSMUSG00000026240.13	ENSMUST00000122884.2	2578	6	0	713	0	-61	multi-exon	FALSE	canonical	3	42	junction_3	130.042147013959	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTCAATATTTGTTA	NA	False	NA	NA	False	NA	NA	NA	86514863	86533987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86526724_86526928_86528804_86528911_86532779
tx.5350	chr13	+	1380	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	4	-2	4	2	multi-exon	FALSE	canonical	3	82	junction_2	4.49691252107735	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAAGTCTGTACATTTT	NA	False	NA	NA	False	NA	NA	NA	55770821	55780226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
tx.5351	chr13	+	5677	23	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-17	-13	intron_retention	FALSE	canonical	3	86	junction_19	66.2512279630466	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTCAGTCGGCATTGTC	NA	False	NA	NA	False	NA	NA	NA	55782822	55829056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
tx.5352	chr13	+	4674	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	-22	0	-22	0	multi-exon	FALSE	canonical	3	233	junction_1	0	227	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	55840914	55851313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55841161_55846885
tx.5353	chr13	+	1480	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	49	-2	49	2	multi-exon	FALSE	canonical	3	237	junction_2	13.4257215820976	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGTGGTTTCGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	55862511	55874042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
tx.5354	chr13	+	470	3	NNC	ENSMUSG00000021496.13	novel	544	4	NA	NA	-111	-36253	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	178.5	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATTTGTAATTTGCT	NA	False	NA	NA	False	NA	NA	NA	55875069	55888388	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_55875288_55880748_55880881_55888268
tx.5355	chr13	+	562	4	FSM	ENSMUSG00000021496.13	ENSMUST00000124968.8	546	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGTTATTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	55875164	55924643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
tx.5356	chr13	-	2301	3	FSM	ENSMUSG00000021506.8	ENSMUST00000021968.7	2451	3	150	0	150	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGAGCCCTAGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	55979088	55972863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_55974425_55976252_55976489_55978584
tx.5357	chr13	-	4192	3	FSM	ENSMUSG00000015937.16	ENSMUST00000137835.8	728	3	-2920	-544	2617	0	multi-exon	FALSE	canonical	3	1103	junction_1	109.5	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	56235254	56221434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_56222206_56230932_56231108_56232008
tx.5358	chr13	-	1927	9	FSM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	116	3	15	0	multi-exon	FALSE	canonical	3	557	junction_5	233.718279933342	265	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6021	False	NA	NA	False	NA	NA	NA	56283328	56221434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
tx.5359	chr13	-	1933	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	834	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6012	False	NA	NA	False	NA	NA	NA	56283337	56221434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
tx.536	chr1	+	1956	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	40	235	-2	-61	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	383	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTCAATATTTGTTA	NA	False	NA	NA	False	NA	NA	NA	86514861	86533987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
tx.5360	chr13	-	3447	3	FSM	ENSMUSG00000049625.7	ENSMUST00000225063.2	2718	3	41	-770	41	-9	multi-exon	FALSE	canonical	1	1	junction_2	2.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAACAAGAGACATTCCT	NA	False	NA	NA	False	NA	NA	NA	56326657	56321525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_56324447_56324717_56324946_56326359
tx.5361	chr13	-	1667	4	FSM	ENSMUSG00000021508.12	ENSMUST00000021970.11	1827	4	156	4	-90	-4	multi-exon	FALSE	canonical	3	62	junction_2	5.8878405775519	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTGTACTCCTGGGC	NA	False	NA	NA	False	NA	NA	NA	56444208	56436459	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_56437621_56440273_56440388_56443638_56443745_56443922
tx.5362	chr13	+	1826	8	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-6	-2332	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	4.23300925429402	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTGTTTTTGCGTTGT	NA	False	NA	NA	False	NA	NA	NA	56586161	56619720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56618964
tx.5363	chr13	+	2747	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	-34	1	29	-1	multi-exon	FALSE	canonical	3	51	junction_1	6.48917367620871	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	9391	False	NA	NA	False	NA	NA	NA	56757364	56787170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
tx.5364	chr13	+	6541	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	40	3	-2	-3	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTCTTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	56850862	56890187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
tx.5365	chr13	+	1347	5	FSM	ENSMUSG00000021540.17	ENSMUST00000138677.8	1398	5	50	1	23	-1	multi-exon	FALSE	canonical	3	51	junction_1	17.4696164811939	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACAACTAGTCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	56850901	56881026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662
tx.5366	chr13	+	6640	7	FSM	ENSMUSG00000021540.17	ENSMUST00000109876.8	4570	7	342	-2412	-274	-5	multi-exon	FALSE	canonical	3	10	junction_1	28.5856413062378	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACAGTGTCTTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	56851206	56890185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_56851390_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
tx.5367	chr13	+	717	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	1	744	1	3	multi-exon	FALSE	canonical	3	143	junction_3	23.6220236220354	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	NA	False	NA	NA	NA	58305468	58311763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
tx.5368	chr13	+	766	5	FSM	ENSMUSG00000050002.15	ENSMUST00000051490.15	764	5	1	-3	1	3	multi-exon	FALSE	canonical	3	14	junction_4	87.5928079239386	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	NA	False	NA	NA	NA	58305463	58311763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58310651_58310696_58311246
tx.5369	chr13	-	3667	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	14	5	14	2	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	1299	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTTGTCTCGCCTCTT	1741	False	NA	NA	False	NA	NA	NA	58363453	58323974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
tx.537	chr1	+	3126	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-37	-4	-2	1	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	NA	False	NA	NA	NA	86631527	86977818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
tx.5370	chr13	-	3583	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	-21	-1	13	1	multi-exon	FALSE	canonical	3	487	junction_3	294.557588324433	770	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGGTTGTCTCGCCTCT	1740	False	NA	NA	False	NA	NA	NA	58363454	58323975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
tx.5371	chr13	-	1694	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	-174	3	-174	-3	multi-exon	FALSE	canonical	0	0	junction_5	54.7743681383791	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTGATCTTCACT	NA	False	NA	NA	False	NA	NA	NA	58422176	58381162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
tx.5372	chr13	-	2002	13	NIC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	-296	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.3916826388011	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	NA	False	NA	NA	False	NA	NA	NA	58422298	58381164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421447_58421636_58421887
tx.5373	chr13	-	1179	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	11	1861	11	-1861	multi-exon	TRUE	canonical	3	402	junction_2	21.2289111041209	189	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCACGCCTTTAGTC	NA	False	NA	NA	False	NA	NA	NA	58533028	58529491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
tx.5374	chr13	-	2691	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1986.9610217719	2416	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4751	False	NA	NA	False	NA	NA	NA	58550330	58539051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
tx.5375	chr13	-	2751	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1931.89781519814	3267	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4751	False	NA	NA	False	NA	NA	NA	58550330	58539051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
tx.5376	chr13	+	2540	3	FSM	ENSMUSG00000035367.10	ENSMUST00000225828.2	3594	3	8	1046	-7	2	multi-exon	FALSE	canonical	3	21	junction_1	177.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAGAATGTTTATATT	NA	False	NA	NA	False	NA	NA	NA	58550069	58557912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_58550332_58554815_58554905_58555723
tx.5377	chr13	+	2456	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	347	1052	-90	0	multi-exon	FALSE	canonical	3	159	junction_1	108.5	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	NA	False	NA	NA	NA	58550423	58557910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_58550604_58554815_58554905_58555723
tx.5378	chr13	+	2539	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-88	-4	-88	0	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	NA	False	NA	NA	NA	58550425	58557910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
tx.5379	chr13	+	2535	4	NNC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-79	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	169.267703817224	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAGAATGTTTATATT	NA	False	NA	NA	False	NA	NA	NA	58550434	58557912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_58550604_58552381_58552470_58554815_58554905_58555723
tx.538	chr1	+	979	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	35	793	10	-1	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	313	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	87141670	87155785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
tx.5380	chr13	+	6657	2	FSM	ENSMUSG00000035367.10	ENSMUST00000224479.2	4212	2	-2449	4	-83	0	multi-exon	FALSE	canonical	3	376	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTGAAAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	58550430	58557906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_58554905_58555723
tx.5381	chr13	-	4408	26	FSM	ENSMUSG00000021557.16	ENSMUST00000022040.14	8174	26	-26	3792	10	3	multi-exon	FALSE	canonical	2	7	junction_25	6.92242731995071	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTCATCTTTTTA	1029	False	NA	NA	False	NA	NA	NA	59705151	59597347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59630330_59630419_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
tx.5382	chr13	-	3597	18	FSM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	-15	-703	-1	703	multi-exon	FALSE	canonical	2	4	junction_1	6.94416685335233	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGTATTTATGTGCTT	1065	False	NA	NA	False	NA	NA	NA	59705115	59640510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_59641685_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
tx.5383	chr13	+	2230	17	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	22	9811	22	447	5prime_fragment	FALSE	canonical	3	649	junction_6	71.965025142426	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTTTTATTTGCAACT	1232	False	NA	NA	False	NA	NA	NA	59733130	59773925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232
tx.5384	chr13	+	2580	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	89	1124	-10	46	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	875	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1299	False	NA	NA	False	NA	NA	NA	59733197	59782612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
tx.5385	chr13	-	3561	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	23	370	-8	0	multi-exon	TRUE	canonical	3	421	junction_9	46.3947102135844	1125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	59823602	59782809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
tx.5386	chr13	+	5988	4	FSM	ENSMUSG00000091311.4	ENSMUST00000165133.3	4287	4	-63	-1638	-63	1638	multi-exon	FALSE	canonical	1	2	junction_3	0.471404520791032	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTAAATTGCTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	59860034	59868747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_59860315_59861449_59861490_59861948_59862010_59863140
tx.5387	chr13	-	1933	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	3	6	3	-1	multi-exon	FALSE	canonical	3	417	junction_3	1.63299316185545	299	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTAGTGGTTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	59917621	59903228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
tx.5388	chr13	-	5556	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_26	20.4582125694906	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	59970922	59919689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
tx.5389	chr13	-	5471	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_26	23.0564011314883	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	59970942	59919689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
tx.539	chr1	+	3663	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	-1	-236	intron_retention	FALSE	canonical	3	16	junction_7	1019.03467726539	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	NA	False	NA	NA	NA	87141699	87167974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87164477_87164571_87165567
tx.5390	chr13	-	5894	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	21.4396428147408	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	59970917	59919689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
tx.5391	chr13	-	3448	2	FSM	ENSMUSG00000035248.10	ENSMUST00000225576.2	2499	2	31	-980	12	980	multi-exon	FALSE	canonical	3	36	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTTTTGTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	59970916	59966946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_59969925_59970446
tx.5392	chr13	-	3107	2	FSM	ENSMUSG00000035248.10	ENSMUST00000225179.2	619	2	6	-2494	6	976	multi-exon	FALSE	canonical	3	43	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACGGTTTTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	59970922	59966950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_59969925_59970789
tx.5393	chr13	-	3014	2	ISM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	27	47576	-6	976	5prime_fragment	FALSE	canonical	3	25	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACGGTTTTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	59970934	59966950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_59969925_59970894
tx.5394	chr13	+	3815	26	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	-29	-1349	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_25	13.3719706849813	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGTGTTCCCTCTTT	9792	False	NA	NA	False	NA	NA	NA	60749731	60907332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60906880
tx.5395	chr13	+	5889	26	FSM	ENSMUSG00000021559.15	ENSMUST00000077453.13	5491	26	-13	-385	-3	-5	multi-exon	FALSE	canonical	3	41	junction_19	8.36334861165072	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9818	False	NA	NA	False	NA	NA	NA	60749757	60911000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
tx.5396	chr13	+	5406	27	FSM	ENSMUSG00000021559.15	ENSMUST00000226059.2	5009	27	-14	-383	-14	-6	multi-exon	FALSE	canonical	3	16	junction_26	11.2282004438423	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTCTAGTCCTTG	9807	False	NA	NA	False	NA	NA	NA	60749746	60910999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909678_60910170
tx.5397	chr13	-	1437	8	NNC	ENSMUSG00000050345.10	novel	1432	8	NA	NA	8169	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	2.96922995583236	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGGACTTCTTTTTTTA	1804	False	NA	NA	False	NA	NA	NA	61004120	60990427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_60990791_60992122_60992241_60992893_60993057_61000913_61001139_61001329_61001477_61001569_61001693_61002626_61002764_61003959
tx.5398	chr13	+	2483	4	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	9.0921211313239	17	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCCTCCGACTCTCTT	NA	False	NA	NA	False	NA	NA	NA	61765145	61783728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_61765281_61776870_61776998_61779171_61779363_61781698
tx.5399	chr13	-	3894	4	Antisense	novelGene_ENSMUSG00000113295.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	3.77123616632825	14	2	2	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGCATCCCATAAACGTG	NA	False	NA	NA	False	NA	NA	NA	61895804	61889662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr13_-_61889678_61891674_61892783_61892950_61893365_61893447
tx.54	chr1	-	6474	13	ISM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	199162	-3350	-23903	-20	3prime_fragment	FALSE	canonical	3	44	junction_3	7.86827314105339	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	13245145	13209348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302
tx.540	chr1	+	3113	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	45	236	20	-236	multi-exon	FALSE	canonical	3	212	junction_6	847.519796556727	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	NA	False	NA	NA	NA	87141680	87167974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
tx.5400	chr13	+	4700	3	FSM	ENSMUSG00000113836.2	ENSMUST00000223499.2	687	3	-71	-3942	-71	2362	multi-exon	FALSE	canonical	3	21	junction_2	28	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCGTTTAATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	62163726	62201162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_62163867_62194994_62195122_62196729
tx.5401	chr13	+	4751	4	FSM	ENSMUSG00000113836.2	ENSMUST00000220871.2	2707	4	320	-2364	-59	2364	multi-exon	FALSE	canonical	3	77	junction_1	103.747556865478	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTTTAATTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	62163738	62201164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_62163867_62194994_62195122_62195306_62195368_62196729
tx.5402	chr13	+	3102	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-2189	-5	2119	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	329	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTATCTCATAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	62245556	62261980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
tx.5403	chr13	+	3094	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	-5	-518	-5	518	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTGTGGACCAGTC	NA	False	NA	NA	False	NA	NA	NA	62277724	62321751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
tx.5404	chr13	+	434	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	21	-3	21	3	multi-exon	FALSE	canonical	3	513	junction_2	20.5	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAGGTATCTGAATTT	NA	False	NA	NA	False	NA	NA	NA	62411400	62421104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_62411510_62420579_62420707_62420906
tx.5405	chr13	+	1519	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	16	280	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCCCGTTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	62411395	62423347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
tx.5406	chr13	-	3126	6	Fusion	ENSMUSG00000113623.2_ENSMUSG00000094942.8	novel	2310	4	NA	NA	-8	612	multi-exon	FALSE	canonical	2	10	junction_3	56.1070405564221	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGGCTGATATGCATC	NA	False	NA	NA	False	NA	NA	NA	62564865	62515529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr13_-_62518166_62519376_62519438_62519623_62519751_62555228_62555290_62555482_62555610_62564751
tx.5407	chr13	-	1618	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-8	-977	-8	429	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	335	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGGGTGCATATTT	NA	False	NA	NA	False	NA	NA	NA	62564865	62549877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
tx.5408	chr13	-	2881	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	7	-396	7	396	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAACACAGACTTGTAAGA	9519	False	NA	NA	False	NA	NA	NA	62614639	62600433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
tx.5409	chr13	+	174	2	Antisense	novelGene_ENSMUSG00000074865.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	62647225	62653901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr13_+_62647371_62653872
tx.541	chr1	+	2993	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113230.8	1569	6	39	-1463	-1	-1	multi-exon	FALSE	canonical	3	1076	junction_1	501.781067797501	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	87141699	87155785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
tx.5410	chr13	-	2676	4	FSM	ENSMUSG00000072066.8	ENSMUST00000223338.2	1457	4	19	-1238	19	-4	multi-exon	FALSE	canonical	3	9	junction_3	3.74165738677394	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATTGGCTAATATCTG	NA	False	NA	NA	False	NA	NA	NA	62771975	62750830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_62753195_62754939_62755001_62755186_62755314_62771851
tx.5411	chr13	-	2785	5	NNC	ENSMUSG00000072066.8	novel	1457	4	NA	NA	28	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	7.79422863405995	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATTGGCTAATATCTG	NA	False	NA	NA	False	NA	NA	NA	62771966	62750830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_62753195_62754939_62755001_62755186_62755314_62770760_62770879_62771851
tx.5412	chr13	-	2632	3	FSM	ENSMUSG00000072066.8	ENSMUST00000201563.4	2640	3	4	4	2	-4	multi-exon	FALSE	canonical	3	9	junction_2	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATTGGCTAATATCTG	NA	False	NA	NA	False	NA	NA	NA	62771992	62750830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_62753195_62755186_62755314_62771851
tx.5413	chr13	+	198	2	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGACCATGTAGAGACTA	NA	False	NA	NA	False	NA	NA	NA	62764592	62945026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_62764738_62944973
tx.5414	chr13	-	5139	4	FSM	ENSMUSG00000113473.2_ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	-19	-2662	-19	1177	multi-exon	FALSE	canonical	3	12	junction_3	60.1461183748008	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACTTTCTGTTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	62832778	62816935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
tx.5415	chr13	-	2470	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-30	-1825	-3	0	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	62832762	62819597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
tx.5416	chr13	-	3976	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	-1	-696	-1	696	multi-exon	TRUE	canonical	3	25	junction_3	2.05480466765633	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGTCTCCAAAGAACCA	NA	False	NA	NA	False	NA	NA	NA	62933623	62919317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
tx.5417	chr13	-	1335	7	FSM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	16	3	16	-3	multi-exon	FALSE	canonical	3	121	junction_2	7.5	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTTGTTATGGGTCTT	NA	False	NA	NA	False	NA	NA	NA	63006220	62984693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_62985095_62988084_62988205_62989599_62989738_62997190_62997332_63001787_63001881_63002717_63002881_63005941
tx.5418	chr13	+	1649	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	-3	-591	-3	2	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCACTCTGGCCTTGCT	NA	False	NA	NA	False	NA	NA	NA	63387839	63450687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
tx.5419	chr13	+	4563	5	ISM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	1	-587	1	-2	intron_retention	FALSE	canonical	3	67	junction_1	29.0387671914632	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAAGCACTCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	63387843	63450683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
tx.542	chr1	+	1426	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	-308	1	-1	-1	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	605	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	87141699	87155785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
tx.5420	chr13	+	2052	5	FSM	ENSMUSG00000021458.18	ENSMUST00000223007.2	918	5	-456	-678	-14	3	multi-exon	FALSE	canonical	2	25	junction_1	45.3231453012696	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCACTCTGGCCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	63420615	63450688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
tx.5421	chr13	-	3048	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	1	-3	intron_retention	FALSE	canonical	3	10	junction_15	36.5910735927038	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATTCAGACCTTCCT	NA	False	NA	NA	False	NA	NA	NA	63579535	63459571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63553910_63554070_63579263
tx.5422	chr13	-	2914	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	-20	217	1	-1	multi-exon	TRUE	canonical	3	59	junction_14	18.8014599954148	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTCAGACCTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	63579558	63459569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
tx.5423	chr13	-	2678	14	FSM	ENSMUSG00000021461.18	ENSMUST00000099444.10	2288	14	-13	-377	-13	-3	multi-exon	FALSE	canonical	3	11	junction_13	30.2197082916227	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATTCAGACCTTCCT	NA	False	NA	NA	False	NA	NA	NA	63579521	63459571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63579263
tx.5424	chr13	-	2548	15	NIC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	30.5478046240141	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGTCCTTGTCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	63579531	63459947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550892_63579263
tx.5425	chr13	-	7226	22	NNC	ENSMUSG00000021466.13	novel	7725	23	NA	NA	719	0	intron_retention	TRUE	canonical	3	40	junction_21	16.3463088817922	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	NA	False	NA	NA	NA	63710910	63656141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63710842
tx.5426	chr13	-	6818	23	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	708	0	intron_retention	FALSE	canonical	3	40	junction_22	16.0224532536208	67	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	NA	False	NA	NA	NA	63710921	63656141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63710842
tx.5427	chr13	-	7841	24	NIC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	-536	0	intron_retention	FALSE	canonical	3	23	junction_23	19.6234881059468	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTGTTTCTAGAATG	NA	False	NA	NA	False	NA	NA	NA	63714085	63656142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713175
tx.5428	chr13	+	5577	19	FSM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	-164	-799	8	0	multi-exon	TRUE	canonical	3	68	junction_14	17.5231768921923	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	NA	False	NA	NA	NA	63963124	64048116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
tx.5429	chr13	+	3061	4	ISM	ENSMUSG00000021470.20	ENSMUST00000095724.11	5879	19	56671	0	1464	0	3prime_fragment	FALSE	canonical	3	92	junction_3	11.2644968324772	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	NA	False	NA	NA	NA	64019786	64048116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_64020742_64025192_64025348_64042451_64042634_64046347
tx.543	chr1	+	3570	7	NIC	ENSMUSG00000026254.18	novel	3394	7	NA	NA	-1	-236	intron_retention	FALSE	canonical	3	212	junction_6	831.352646126914	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	NA	False	NA	NA	NA	87141699	87167974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
tx.5430	chr13	-	1846	3	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	1.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCTCATTTGGAACATG	NA	False	NA	NA	False	NA	NA	NA	64116541	64077847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_-_64079440_64079875_64079955_64116366
tx.5431	chr13	-	2287	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	15	1	-4	-1	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTATGGTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	64277154	64244122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
tx.5432	chr13	-	2104	9	NIC	ENSMUSG00000033114.12	novel	983	11	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	35.5773804544404	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTATGGTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	64277160	64244122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64276999
tx.5433	chr13	-	2233	11	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	31.255239560752	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTATGGTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	64277168	64244122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64268408_64268496_64270132_64270167_64276999
tx.5434	chr13	-	3540	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	-15	7	-15	-7	multi-exon	FALSE	canonical	3	41	junction_4	7.32717544487642	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAAGTACATGGGTCAT	6035	False	NA	NA	False	NA	NA	NA	64301031	64280838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
tx.5435	chr13	+	1300	2	FSM	ENSMUSG00000021476.10	ENSMUST00000221264.2	471	2	-369	-460	8	460	multi-exon	FALSE	canonical	3	21	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGGTTTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	64309690	64311892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_64310149_64311050
tx.5436	chr13	+	4856	7	FSM	ENSMUSG00000021476.10	ENSMUST00000221904.2	4903	7	45	2	0	-2	multi-exon	FALSE	canonical	3	144	junction_5	8.22090830342568	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGCCTTATTCATTT	NA	False	NA	NA	False	NA	NA	NA	64309682	64334349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64332573_64333086
tx.5437	chr13	+	2560	8	FSM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	3	1	3	-1	multi-exon	FALSE	canonical	3	140	junction_6	9.99183340002612	252	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGCCTTATTCATTTT	NA	False	NA	NA	False	NA	NA	NA	64309685	64334350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386_64332573_64333086
tx.5438	chr13	-	4473	3	NNC	ENSMUSG00000033102.16	novel	628	5	NA	NA	337	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	8	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	NA	NA	NA	64345401	64340358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_64344490_64344793_64344860_64345125
tx.5439	chr13	-	5597	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	138	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	22.1833730712064	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	NA	NA	NA	64396318	64340358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
tx.544	chr1	+	3648	8	NIC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	0	-236	intron_retention	FALSE	canonical	3	22	junction_7	1014.93826091511	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	NA	False	NA	NA	NA	87141700	87167974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
tx.5440	chr13	-	5611	14	FSM	ENSMUSG00000033102.16	ENSMUST00000109769.10	2886	14	88	-2813	88	0	multi-exon	FALSE	canonical	3	22	junction_2	22.3145877936915	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	NA	NA	NA	64396368	64340358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
tx.5441	chr13	-	4734	14	FSM	ENSMUSG00000033102.16	ENSMUST00000039318.16	5859	14	-9	1134	-9	-1134	multi-exon	FALSE	canonical	3	22	junction_2	21.3895954356179	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTGCCACAATCAAGGG	9667	False	NA	NA	False	NA	NA	NA	64422811	64341492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
tx.5442	chr13	-	5846	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_13	15.7570309280854	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTTTGTTGTATTCA	9658	False	NA	NA	False	NA	NA	NA	64422820	64340359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
tx.5443	chr13	-	5927	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	21.3508112927154	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTTTGTTGTATTCA	9643	False	NA	NA	False	NA	NA	NA	64422835	64340359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
tx.5444	chr13	-	3015	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	-19	15	-19	6	multi-exon	TRUE	canonical	3	150	junction_1	21.3672646822189	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTTGGGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	64460543	64437625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
tx.5445	chr13	-	1409	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-20	582	-20	-582	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	780	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	NA	False	NA	NA	NA	64518140	64511609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
tx.5446	chr13	+	2012	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	54	2052	13	1	multi-exon	TRUE	canonical	3	37	junction_1	3.65892813567591	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	64580181	64587535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
tx.5447	chr13	-	3451	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	6	375	5	108	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	714	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATTTTAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	65260783	65212851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
tx.5448	chr13	-	3629	10	FSM	ENSMUSG00000032999.11	ENSMUST00000037372.8	3527	10	-103	1	-103	-1	multi-exon	FALSE	canonical	3	44	junction_9	7.43531778858738	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTGACTTCTAATCTCAA	NA	False	NA	NA	False	NA	NA	NA	65353633	65324925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433
tx.5449	chr13	-	3550	11	NNC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	16.0947196309846	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTACTGACTTCTAATCTC	NA	False	NA	NA	False	NA	NA	NA	65353802	65324927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353776
tx.545	chr1	+	1906	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	-53	1	-53	-1	multi-exon	FALSE	canonical	3	11	junction_2	0.942809041582063	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCAGTGTGCCTTTTTGG	1355	False	NA	NA	False	NA	NA	NA	87192031	87238560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
tx.5450	chr13	-	3551	11	FSM	ENSMUSG00000032999.11	ENSMUST00000221659.2	3551	11	3	-3	0	2	multi-exon	FALSE	canonical	3	10	junction_10	15.0253119767944	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTACTGACTTCTAATCTC	NA	False	NA	NA	False	NA	NA	NA	65353779	65324927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353752
tx.5451	chr13	+	1539	8	FSM	ENSMUSG00000021514.19	ENSMUST00000130799.8	1580	8	19	22	-19	-21	multi-exon	FALSE	canonical	1	4	junction_7	17.3980998258724	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTATTGTGTGGAACTT	NA	False	NA	NA	False	NA	NA	NA	65426646	65452013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65451631
tx.5452	chr13	+	9327	8	FSM	ENSMUSG00000021514.19	ENSMUST00000126879.8	2909	8	7	-6425	7	0	multi-exon	FALSE	canonical	3	28	junction_1	11.5564276663752	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTGCTGTGATAGCT	NA	False	NA	NA	False	NA	NA	NA	65426634	65452034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
tx.5453	chr13	+	9325	8	NIC	ENSMUSG00000021514.19	novel	2909	8	NA	NA	24	-7	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	15.7829667938676	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTTTTTTTCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	65426740	65452027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_65426913_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
tx.5454	chr13	-	3886	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3	812	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_1	33.8110558841335	83	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	7278	False	NA	NA	False	NA	NA	NA	65496414	65483223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297
tx.5455	chr13	-	2822	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-6	-339	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	39.8834238750888	24	1	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	7275	False	NA	NA	False	NA	NA	NA	65496417	65484374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_65486600_65486935_65487225_65488362_65488424_65488791_65488919_65496297
tx.5456	chr13	-	2704	3	Genic_Genomic	ENSMUSG00000114031.2	novel	908	1	NA	NA	-5564	-96	multi-exon	FALSE	canonical	3	95	junction_2	64.5	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGAACAGTCATCTCCA	NA	False	NA	NA	False	NA	NA	NA	65632670	65626294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr13_-_65628768_65628968_65629055_65632525
tx.5457	chr13	-	5988	2	Genic_Genomic	ENSMUSG00000114031.2	novel	908	1	NA	NA	-5555	-274	multi-exon	FALSE	canonical	3	224	junction_1	0	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTAAAGTCATTGCATGT	NA	False	NA	NA	False	NA	NA	NA	65632661	65626472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr13_-_65628768_65628968
tx.5458	chr13	+	3148	4	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-8747	-233	multi-exon	FALSE	canonical	3	7	junction_1	10.8730042868667	48	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65651744	65662559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr13_+_65651859_65658192_65658320_65658519_65658581_65659713
tx.5459	chr13	+	5429	3	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-8747	915	intron_retention	FALSE	canonical	3	7	junction_1	9	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65651744	65663707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr13_+_65651859_65658192_65658320_65658519
tx.546	chr1	+	2973	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	-28	70	-1	-70	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGATGTTTTCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	87254723	87285436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
tx.5460	chr13	-	3165	4	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	22.1560124771785	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65705524	65693382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr13_-_65696241_65697380_65697442_65697641_65697769_65705405
tx.5461	chr13	-	3694	5	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-19	4689	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	104.958027325212	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTCTCTCCAGTTATTG	NA	False	NA	NA	False	NA	NA	NA	65768076	65758948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_65761711_65761787_65762285_65763699_65763903_65764103_65764190_65767930
tx.5462	chr13	+	3250	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	-36	-1689	-36	1321	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261257	66271971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
tx.5463	chr13	+	3163	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-33	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	91.7234293951115	44	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261260	66271969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269233_66269314
tx.5464	chr13	-	2659	4	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-16544	1488	multi-exon	FALSE	canonical	3	41	junction_2	29.4542960458327	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	9943	False	NA	NA	False	NA	NA	NA	66391931	66373644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr13_-_66375998_66384209_66384271_66384471_66384599_66391813
tx.5465	chr13	-	2736	4	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7335	967	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1859	False	NA	NA	False	NA	NA	NA	66439300	66427982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
tx.5466	chr13	-	2819	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-60	-172	-20	172	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66589199	66577778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
tx.5467	chr13	-	4007	3	ISM	ENSMUSG00000074832.12	ENSMUST00000173583.8	515	5	-20	11606	-20	172	5prime_fragment	FALSE	canonical	3	147	junction_1	23	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66589199	66577778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_66581540_66581739_66581867_66589080
tx.5468	chr13	+	4055	2	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGAAAAGGAGTAT	NA	False	NA	NA	False	NA	NA	NA	66606336	66610592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_66610037_66610237
tx.5469	chr13	+	3082	4	NNC	ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6336	1394	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	16.0069429380573	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66667706	66678802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_66667826_66674049_66674177_66674374_66674436_66676027
tx.547	chr1	+	5707	29	FSM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	17	0	-9	0	multi-exon	FALSE	canonical	3	77	junction_9	29.4000164861817	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	NA	False	NA	NA	NA	87254741	87378518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
tx.5470	chr13	+	7636	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9012	5874	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCCATTCGTTTCACCT	5533	False	NA	NA	False	NA	NA	NA	66711972	66729849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
tx.5471	chr13	+	1857	3	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGGCTATCATTGCAG	NA	False	NA	NA	False	NA	NA	NA	66773921	66784462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_66774068_66782550_66782678_66782878
tx.5472	chr13	-	3077	4	NNC	ENSMUSG00000074830.5	novel	894	4	NA	NA	-7493	1309	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_1	38.262252939418	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66828886	66816682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_66819455_66821007_66821069_66821267_66821395_66828769
tx.5473	chr13	-	4625	3	NNC	ENSMUSG00000074830.5	novel	894	4	NA	NA	-7491	1306	intron_retention	FALSE	canonical	3	156	junction_2	39	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66828884	66816685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_66821069_66821267_66821395_66828769
tx.5474	chr13	+	1135	4	NNC	ENSMUSG00000114327.2	novel	818	2	NA	NA	-31	115292	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	17.9876500843094	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGAACTGTTTTTCTAG	NA	False	NA	NA	False	NA	NA	NA	66828986	66972313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_66829202_66843359_66843401_66843752_66843820_66971501
tx.5475	chr13	-	2377	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	882	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	67.8762661023719	31	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66950624	66939251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_66940626_66940876_66941596_66942701_66942763_66942962_66943090_66950528
tx.5476	chr13	-	3734	3	NIC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	882	intron_retention	FALSE	canonical	3	157	junction_2	3	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66950624	66939251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_66942763_66942962_66943090_66950528
tx.5477	chr13	-	482	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	53	0	53	0	multi-exon	FALSE	canonical	3	4784	junction_3	381.861231339344	643	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATTATTTGAATTCAA	7765	False	NA	NA	False	NA	NA	NA	67053389	67048680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
tx.5478	chr13	-	1452	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	27	0	6	0	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	404	False	NA	NA	False	NA	NA	NA	67081125	67060181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
tx.5479	chr13	-	3711	7	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	328	junction_5	16.739839372653	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	393	False	NA	NA	False	NA	NA	NA	67081136	67060181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
tx.548	chr1	+	5682	29	FSM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	-2	-1651	-2	0	multi-exon	FALSE	canonical	3	42	junction_9	32.8746847583241	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	NA	False	NA	NA	NA	87254748	87378518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
tx.5480	chr13	+	2710	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	322	392	-64	-117	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	331	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTTTGTTAGAATGAT	8180	False	NA	NA	False	NA	NA	NA	67081215	67146073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
tx.5481	chr13	-	2439	4	FSM	ENSMUSG00000058883.17	ENSMUST00000109742.11	2416	4	-29	6	4	-5	multi-exon	FALSE	canonical	1	2	junction_1	6.68331255192114	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATCGTCAGTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	67229605	67217468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67229513
tx.5482	chr13	+	4126	4	FSM	ENSMUSG00000057396.8	ENSMUST00000052716.8	3482	4	-27	-617	-26	617	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCCTGGTTTGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	67276264	67290468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_67276379_67284781_67284909_67285373_67285470_67286679
tx.5483	chr13	+	1722	4	NNC	ENSMUSG00000058900.6	novel	2591	4	NA	NA	-49	-840	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_1	9.80929264637478	11	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTTCTAGAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	67321196	67331268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_67321240_67324511_67324639_67325128_67325225_67329812
tx.5484	chr13	+	2676	4	NNC	ENSMUSG00000051037.16	novel	2712	4	NA	NA	224	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1.24721912892465	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGTTTATTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	67342822	67357362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_67342876_67346596_67346724_67347212_67347309_67354962
tx.5485	chr13	-	5520	4	FSM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	-26	-817	-26	817	multi-exon	FALSE	canonical	3	11	junction_1	6.64997911442	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGTGGAACCATTCC	NA	False	NA	NA	False	NA	NA	NA	67508750	67486552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67491722_67493413_67493510_67495906_67496034_67508622
tx.5486	chr13	-	2025	4	FSM	ENSMUSG00000078995.11	ENSMUST00000057070.9	4126	4	0	2101	0	-2101	multi-exon	FALSE	canonical	2	8	junction_1	8.33999733546453	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAGTTCCAGAATGAAG	2228	False	NA	NA	False	NA	NA	NA	67523929	67513803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67515485_67520295_67520392_67520869_67520997_67523808
tx.5487	chr13	-	1525	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	-34	1843	-34	912	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGATAAAGCCTAGTTAA	NA	False	NA	NA	False	NA	NA	NA	67569571	67555670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
tx.5488	chr13	-	4714	3	FSM	ENSMUSG00000055560.9	ENSMUST00000224496.2	504	3	-176	-4034	-166	-320	multi-exon	FALSE	canonical	3	38	junction_2	2.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACATATGAGTTAATGT	NA	False	NA	NA	False	NA	NA	NA	67569703	67556978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67561323_67561952_67562080_67569460
tx.5489	chr13	-	2328	4	FSM	ENSMUSG00000071291.11	ENSMUST00000076123.12	2391	4	63	0	-5	0	multi-exon	FALSE	canonical	3	37	junction_3	4.08248290463863	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCTTTGGTCATGCCA	NA	False	NA	NA	False	NA	NA	NA	67648611	67638286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648489
tx.549	chr1	+	4537	19	ISM	ENSMUSG00000048000.16	ENSMUST00000174501.8	3876	27	52904	-1651	-29	0	3prime_fragment	FALSE	canonical	3	124	junction_7	21.899320695254	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	8003	False	NA	NA	False	NA	NA	NA	87335071	87378518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
tx.5490	chr13	-	2326	4	FSM	ENSMUSG00000071291.11	ENSMUST00000171518.8	2300	4	-27	1	25	0	multi-exon	FALSE	canonical	3	18	junction_3	12.657891697365	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCTTTGGTCATGCCA	NA	False	NA	NA	False	NA	NA	NA	67648649	67638286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648529
tx.5491	chr13	-	2629	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	24	3	-7	-3	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCCTGGTCATAGTGT	9246	False	NA	NA	False	NA	NA	NA	67674272	67663902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
tx.5492	chr13	-	4609	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	679	5	-13	-5	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCAGGTGAGAACTGTA	NA	False	NA	NA	False	NA	NA	NA	67701270	67686764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
tx.5493	chr13	-	4835	4	FSM	ENSMUSG00000058093.14	ENSMUST00000138725.3	855	4	8	-3988	8	-2	multi-exon	FALSE	canonical	3	11	junction_3	22.5437845585479	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGTTTGGTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	67757798	67737559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757661
tx.5494	chr13	-	4805	4	FSM	ENSMUSG00000058093.14	ENSMUST00000012873.16	4835	4	28	2	8	-2	multi-exon	FALSE	canonical	3	23	junction_3	17.2497987105808	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGTTTGGTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	67757798	67737559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757691
tx.5495	chr13	-	5226	4	FSM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	-7	4236	-7	28	multi-exon	FALSE	canonical	3	9	junction_2	10.6144555520604	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCCTATTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	67785917	67765117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67769969_67771586_67771683_67772153_67772281_67785765
tx.5496	chr13	-	4504	4	FSM	ENSMUSG00000048280.19	ENSMUST00000175821.8	652	4	-25	-3827	10	3827	multi-exon	FALSE	canonical	3	10	junction_1	5.09901951359278	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	67831660	67815558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67819731_67821116_67821213_67821680_67821808_67831551
tx.5497	chr13	-	3988	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	-5	-2880	-5	0	multi-exon	TRUE	canonical	3	31	junction_1	3.85861230093008	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	67872450	67853427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
tx.5498	chr13	-	2239	4	FSM	ENSMUSG00000058331.16	ENSMUST00000144183.3	2312	4	73	0	-9	0	multi-exon	FALSE	canonical	3	13	junction_3	2.44948974278318	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCAGTATTGTGATTAAT	NA	False	NA	NA	False	NA	NA	NA	67903274	67895918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_67897842_67899728_67899825_67900506_67900634_67903181
tx.5499	chr13	+	3176	5	Fusion	ENSMUSG00000090659.10_ENSMUSG00000097906.2	novel	3258	4	NA	NA	-2	1729	multi-exon	FALSE	canonical	1	1	junction_3	15.1657508881031	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTGTTTCTATTTG	NA	False	NA	NA	False	NA	NA	NA	67927821	67961048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr13_+_67927939_67931908_67932036_67932512_67932609_67949963_67950053_67958301
tx.55	chr1	-	7689	19	ISM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	183970	-3350	-39095	-20	3prime_fragment	FALSE	canonical	3	44	junction_3	7.50555349946513	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	13260337	13209348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310
tx.550	chr1	-	2211	11	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	6914	-3	6914	3	3prime_fragment	FALSE	canonical	1	2	junction_2	4.22018956920184	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTAGAGACCTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	87431170	87404552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987
tx.5500	chr13	+	3264	4	FSM	ENSMUSG00000090659.10	ENSMUST00000164936.10	3258	4	-2	-4	-2	4	multi-exon	FALSE	canonical	3	27	junction_3	3.39934634239519	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGGTCAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	67927821	67937201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_67927939_67931908_67932036_67932512_67932609_67934277
tx.5501	chr13	+	3097	4	Fusion	ENSMUSG00000090659.10_ENSMUSG00000097906.2	novel	3258	4	NA	NA	0	1729	multi-exon	FALSE	canonical	2	7	junction_3	12.7540843131393	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTGTTTCTATTTG	NA	False	NA	NA	False	NA	NA	NA	67927811	67961048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr13_+_67927939_67931908_67932036_67932512_67932609_67958301
tx.5502	chr13	+	3004	4	FSM	ENSMUSG00000030446.18	ENSMUST00000181391.8	2399	4	61	-666	-11	666	multi-exon	FALSE	canonical	3	9	junction_1	7.58653778449403	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGTATTTTACATCAAA	NA	False	NA	NA	False	NA	NA	NA	67961919	67975787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_67962016_67970359_67970487_67971218_67971315_67973102
tx.5503	chr13	-	3161	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	116.868753546684	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCAAGCTTGGTGAGGC	NA	False	NA	NA	False	NA	NA	NA	68730242	68708904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
tx.5504	chr13	-	2823	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-10	-85	-2	85	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTATTGTGTGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	68730242	68709396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
tx.5505	chr13	-	3195	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-4	501	-4	82	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	NA	False	NA	NA	NA	68730244	68709399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
tx.5506	chr13	-	3043	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-6	82	combination_of_known_junctions	FALSE	canonical	3	56	junction_12	89.8987596257508	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	NA	False	NA	NA	NA	68730246	68709399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
tx.5507	chr13	-	3433	15	NIC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	-1	82	combination_of_known_junctions	FALSE	canonical	3	42	junction_14	91.4475705706024	7	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	NA	False	NA	NA	NA	68730220	68709399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68729921
tx.5508	chr13	+	2357	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	45.0175891550551	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGTGTACTCTTGTTA	NA	False	NA	NA	False	NA	NA	NA	68730343	68740456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_68730384_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
tx.5509	chr13	+	2620	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	39.5010548382361	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	68730359	68740401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
tx.551	chr1	-	2735	13	FSM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	7	4	7	-4	multi-exon	FALSE	canonical	1	2	junction_2	3.91578004149024	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGAGGTAGAGACCT	NA	False	NA	NA	False	NA	NA	NA	87438077	87404559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
tx.5510	chr13	+	2362	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	3	56	3	3	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	68730369	68740401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
tx.5511	chr13	-	4773	13	NNC	ENSMUSG00000034575.14	novel	4750	13	NA	NA	-25	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	17.3755495516609	42	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCCTCTGAAGGGTGG	NA	False	NA	NA	False	NA	NA	NA	69682761	69646076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_69648227_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
tx.5512	chr13	-	4745	13	FSM	ENSMUSG00000034575.14	ENSMUST00000198607.5	4750	13	6	-1	6	1	multi-exon	FALSE	canonical	3	61	junction_1	10.3077640640442	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCCTCTGAAGGGTGG	NA	False	NA	NA	False	NA	NA	NA	69682730	69646076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
tx.5513	chr13	-	2658	5	FSM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	-14	0	-14	0	multi-exon	FALSE	canonical	2	14	junction_3	7.15454401062709	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATTGTTTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	69759575	69721567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349_69748517_69759085
tx.5514	chr13	+	2824	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	11	-1	11	1	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	3138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	NA	False	NA	NA	NA	69760145	69782454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
tx.5515	chr13	+	2463	3	FSM	ENSMUSG00000021598.10	ENSMUST00000220649.2	451	3	-1742	-270	2	2	multi-exon	FALSE	canonical	3	786	junction_2	19.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATGTAATTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	69957961	69964221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_69959810_69961822_69961926_69963709
tx.5516	chr13	+	2677	3	FSM	ENSMUSG00000021598.10	ENSMUST00000221893.2	815	3	-56	-1806	17	1	multi-exon	FALSE	canonical	3	811	junction_1	7	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCATGTAATTCTTAA	NA	False	NA	NA	False	NA	NA	NA	69957976	69964220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_69958172_69959725_69959810_69961822
tx.5517	chr13	+	882	4	FSM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	28	3	-22	1	multi-exon	FALSE	canonical	3	786	junction_3	16.1314048434171	252	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCATGTAATTCTTAA	-6	True	NA	NA	False	NA	NA	NA	69957987	69964220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_69958172_69959725_69959810_69961822_69961926_69963709
tx.5518	chr13	-	5005	7	ISM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	32299	-5	-2770	3	3prime_fragment	FALSE	canonical	3	141	junction_2	15.4569294061488	53	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATTGTTTTATGTG	NA	False	NA	NA	False	NA	NA	NA	70753454	70736810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297
tx.5519	chr13	-	7842	19	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-172	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	40.7369232218174	135	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGTGATTGTTTTATG	NA	False	NA	NA	False	NA	NA	NA	70785925	70736812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70769556_70769574_70772039_70772077_70772526_70772586_70785635
tx.552	chr1	+	4115	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	11	-1	11	0	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	572	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTCCTGACTGTGTG	9381	False	NA	NA	False	NA	NA	NA	87603971	87648225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
tx.5520	chr13	+	2684	5	FSM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	-62	3	-62	-3	multi-exon	FALSE	canonical	3	12	junction_3	5.35607132140714	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTTTTCATCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	72776876	72782314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_72777433_72778689_72779096_72779375_72780090_72780704_72780781_72781382
tx.5521	chr13	-	556	4	FSM	ENSMUSG00000021606.9	ENSMUST00000147407.2	534	4	-19	-3	-9	-2	multi-exon	FALSE	canonical	3	341	junction_3	967.204333231723	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGAGTTGTTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	73476590	73467994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476396
tx.5522	chr13	-	495	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	71	2	-9	-2	multi-exon	FALSE	canonical	3	2374	junction_2	33.95094500403	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGAGTTGTTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	73476590	73467994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
tx.5523	chr13	+	897	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	25	1	-13	-1	multi-exon	FALSE	canonical	3	623	junction_1	0	195	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGAGTAGTAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	73479131	73480296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_73479211_73479478
tx.5524	chr13	-	1295	3	FSM	ENSMUSG00000113346.3	ENSMUST00000223470.3	1306	3	11	0	11	0	multi-exon	FALSE	canonical	3	37	junction_2	10.5	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCCTGAGTTCAAATCC	NA	False	NA	NA	False	NA	NA	NA	73495492	73492783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_73493358_73494614_73495181_73495337
tx.5525	chr13	+	3635	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	36	4	2	-4	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	1086	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGGCTCGAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	73615351	73664537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
tx.5526	chr13	+	2357	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	-17	0	-17	0	multi-exon	FALSE	canonical	3	235	junction_7	20.082544503872	449	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTTAACCTCTAAT	NA	False	NA	NA	False	NA	NA	NA	73752107	73768724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
tx.5527	chr13	+	4322	16	FSM	ENSMUSG00000021611.10	ENSMUST00000022104.9	4313	16	-9	0	-4	0	multi-exon	FALSE	canonical	3	21	junction_2	5.35163526410386	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTCATACTAATTCG	2119	False	NA	NA	False	NA	NA	NA	73775025	73797962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
tx.5528	chr13	+	5133	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	7	2	-3	-2	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	1182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	NA	False	NA	NA	False	NA	NA	NA	73911822	73964871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
tx.5529	chr13	+	5336	2	FSM	ENSMUSG00000017756.10	ENSMUST00000221813.2	356	2	-3216	-1764	341	-2	multi-exon	FALSE	canonical	3	758	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	1794	False	NA	NA	False	NA	NA	NA	73958365	73964871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_73961792_73962961
tx.553	chr1	+	3932	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	11	-1	11	0	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTCCTGACTGTGTG	9381	False	NA	NA	False	NA	NA	NA	87603971	87648225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
tx.5530	chr13	-	3985	10	FSM	ENSMUSG00000021567.16	ENSMUST00000022051.14	4016	10	19	12	0	-12	multi-exon	FALSE	canonical	2	3	junction_1	1.49897084035912	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGAGTGAAGTGTCGCC	NA	False	NA	NA	False	NA	NA	NA	73995731	73966664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995031_73995136_73995388_73995425_73995521
tx.5531	chr13	-	2275	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	15	1109	15	2	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	427	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTTTTATTCTAACG	NA	False	NA	NA	False	NA	NA	NA	74085888	74060574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
tx.5532	chr13	+	2428	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	-27	6	0	0	multi-exon	FALSE	canonical	3	92	junction_6	21.3306248280625	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATCACCCCGTCCGCT	NA	False	NA	NA	False	NA	NA	NA	74085929	74109008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
tx.5533	chr13	+	2492	16	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	34.8873743478768	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACCCCGTCCGCTTTGA	NA	False	NA	NA	False	NA	NA	NA	74085929	74109012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
tx.5535	chr13	-	3084	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	-319	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGACGTAGTTGAGTT	NA	False	NA	NA	False	NA	NA	NA	74210420	74184937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
tx.5536	chr13	-	2493	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	16	1132	16	0	multi-exon	FALSE	canonical	3	27	junction_5	28.6590098045136	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	74210402	74185750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
tx.5537	chr13	-	2328	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	74210414	74185750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
tx.5538	chr13	-	4668	11	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	100	junction_7	14.9946657181812	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGGCTGTTTTTAGATT	NA	False	NA	NA	False	NA	NA	NA	74210420	74184618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
tx.5539	chr13	-	2367	12	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	1611	2504	-5	7	3prime_fragment	FALSE	canonical	3	205	junction_10	31.3753601276622	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGTGTGATGTCAG	8784	False	NA	NA	False	NA	NA	NA	74355217	74320110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025
tx.554	chr1	+	1764	2	ISM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	41465	-1	8363	0	3prime_fragment	FALSE	canonical	3	579	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTCCTGACTGTGTG	4249	False	NA	NA	False	NA	NA	NA	87645425	87648225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_87646007_87647042
tx.5540	chr13	-	3220	13	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	33	7	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	65.7558615891643	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGTGTGATGTCAG	7206	False	NA	NA	False	NA	NA	NA	74356795	74320110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
tx.5541	chr13	-	2402	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	16	2504	16	7	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	273	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGTGTGATGTCAG	7189	False	NA	NA	False	NA	NA	NA	74356812	74320110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
tx.5542	chr13	-	1085	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	38	8	1	0	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	302	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTAGTTTTGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	74465402	74451635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
tx.5543	chr13	-	1081	6	FSM	ENSMUSG00000021576.7	ENSMUST00000222759.2	1376	6	295	0	-1	0	multi-exon	FALSE	canonical	3	148	junction_2	263.104085867172	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTAGTTTTGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	74465404	74451635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74452168_74453659_74453770_74457808_74457962_74459786_74459832_74464448_74464511_74465225
tx.5544	chr13	-	2858	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	42	0	1	0	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	2019	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74498357	74470372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
tx.5545	chr13	+	3420	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	23	6116	-12	-1028	multi-exon	FALSE	canonical	3	416	junction_2	9.5	244	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGATGATTTGTTTCTCA	4373	False	NA	NA	False	NA	NA	NA	74498450	74507786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_74498528_74500974_74501106_74504574
tx.5546	chr13	-	4099	5	NNC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	13.7181449183189	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTAGCTTTTGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	74538946	74517446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_74520947_74523086_74523183_74524554_74524639_74526730_74526986_74538782
tx.5547	chr13	-	4142	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	9	2	9	-2	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTAGCTTTTGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	74538946	74517446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
tx.5548	chr13	+	4038	4	NNC	ENSMUSG00000062382.10	novel	491	4	NA	NA	-21	5617	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_3	24.2532930181083	84	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGGGATTCTCCACAGA	1226	False	NA	NA	False	NA	NA	NA	74547791	74561082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_74547912_74553897_74554023_74554221_74554283_74557350
tx.5549	chr13	+	5226	2	Fusion	ENSMUSG00000062382.10_ENSMUSG00000076033.3	novel	491	4	NA	NA	-32	3851	intron_retention	FALSE	canonical	3	12	junction_1	0	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGGGTGGTTGTGAGCCA	1215	False	NA	NA	False	NA	NA	NA	74547780	74559316	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr13_+_74547912_74554221
tx.555	chr1	+	3027	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-20	-3	0	0	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7288	False	NA	NA	False	NA	NA	NA	87683777	87720147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
tx.5550	chr13	+	2136	3	ISM	ENSMUSG00000062382.10_ENSMUSG00000076033.3	ENSMUST00000221435.2	491	4	-21	-1298	-21	647	intron_retention	FALSE	canonical	3	85	junction_2	7	47	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTTGTTTCATTTTTCT	1226	False	NA	NA	False	NA	NA	NA	74547791	74556112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_74547912_74553897_74554023_74554221
tx.5551	chr13	-	6999	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	6	-5391	6	5391	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGCACGTGCCATTGTC	6475	False	NA	NA	False	NA	NA	NA	74610832	74589999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
tx.5552	chr13	-	3325	6	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	-207	1670	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	26.2022899762597	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTCCTGCTGTGATC	NA	False	NA	NA	False	NA	NA	NA	74642318	74626502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968_74642054_74642157
tx.5553	chr13	-	2068	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	8	-527	8	524	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCTCCAGTTACT	NA	False	NA	NA	False	NA	NA	NA	74642103	74627648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
tx.5554	chr13	-	3097	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	-24	-1667	-2	1667	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAAGTCCTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	74642113	74626505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
tx.5555	chr13	-	3209	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	-26	-2788	-26	2788	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74670606	74654928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
tx.5556	chr13	-	5813	3	ISM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	7037	-1584	7037	1584	3prime_fragment	FALSE	canonical	3	55	junction_1	14	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	74663543	74656132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_74657816_74659212_74659274_74659474
tx.5557	chr13	-	3409	4	ISM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	382	-2774	0	2584	3prime_fragment	FALSE	canonical	3	33	junction_3	16.8720676464584	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	NA	False	NA	NA	False	NA	NA	NA	74711993	74699444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857
tx.5558	chr13	-	3477	5	FSM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	3	-2776	3	2586	multi-exon	FALSE	canonical	3	16	junction_4	21.3658606192215	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCTCCAGTTACT	NA	False	NA	NA	False	NA	NA	NA	74712372	74699442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857_74711944_74712256
tx.5559	chr13	-	3525	4	NIC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18607	3079	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	25.3508711224421	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74739546	74724397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_74727579_74728971_74729033_74729232_74729360_74739390
tx.556	chr1	+	3083	18	FSM	ENSMUSG00000026289.16	ENSMUST00000027512.13	3130	18	44	3	1	0	multi-exon	FALSE	canonical	3	20	junction_7	58.4556141318301	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7289	False	NA	NA	False	NA	NA	NA	87683778	87720147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
tx.5560	chr13	-	3113	4	FSM	ENSMUSG00000113204.2	ENSMUST00000221506.2	1288	4	367	-2192	-25	0	multi-exon	FALSE	canonical	3	22	junction_3	33.95094500403	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5193	False	NA	NA	False	NA	NA	NA	74765454	74753063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74765320
tx.5561	chr13	-	3990	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220478.2	1989	6	362	-2363	-30	523	multi-exon	FALSE	canonical	3	17	junction_3	36.0366480128216	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTGACTCTCCAGTT	5188	False	NA	NA	False	NA	NA	NA	74765459	74752540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320
tx.5562	chr13	-	3645	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	-80	-2194	62	2	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGGTCATGATGTCTA	4888	False	NA	NA	False	NA	NA	NA	74765759	74753061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
tx.5563	chr13	+	3984	19	FSM	ENSMUSG00000021583.8	ENSMUST00000169114.3	5644	19	273	1387	-12	-1387	multi-exon	TRUE	canonical	1	4	junction_16	2.26077666104176	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTCAATTATATTTTCA	NA	False	NA	NA	False	NA	NA	NA	74787959	74839933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_74788013_74794289_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
tx.5564	chr13	-	2807	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	83	1875	-4	0	multi-exon	FALSE	canonical	3	102	junction_28	16.6207701385947	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTACTTTCTTAGGAAT	NA	False	NA	NA	False	NA	NA	NA	74918772	74842361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
tx.5565	chr13	-	2853	30	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	49	junction_27	26.473283146802	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCCTGAACTCTACTTT	NA	False	NA	NA	False	NA	NA	NA	74918770	74842370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
tx.5566	chr13	-	3071	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	140	2	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACTTTCTTAGGAATGA	NA	False	NA	NA	False	NA	NA	NA	74956789	74842359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
tx.5567	chr13	-	4901	32	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	3	15	junction_31	37.1226557681413	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	74956072	74840486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74955937
tx.5568	chr13	-	3132	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	123	1886	123	1	multi-exon	FALSE	canonical	3	49	junction_27	33.4677691410694	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCCTGAACTCTACT	NA	False	NA	NA	False	NA	NA	NA	74956806	74842372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
tx.5569	chr13	+	5007	14	FSM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	29	4	29	-4	multi-exon	FALSE	canonical	1	7	junction_5	4.93268293596351	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCTTCATGAGAATAA	NA	False	NA	NA	False	NA	NA	NA	75237973	75282976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160_75278323_75280060
tx.557	chr1	+	5704	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-9	0	-9	0	multi-exon	FALSE	canonical	3	256	junction_21	37.602590545009	504	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4061	False	NA	NA	False	NA	NA	NA	87780999	87872212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
tx.5570	chr13	+	3641	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	738	3	-90	-3	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	528	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6190	False	NA	NA	False	NA	NA	NA	75855613	75920480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
tx.5571	chr13	+	1304	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	39	2	-3	-2	multi-exon	FALSE	canonical	3	287	junction_1	16	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTTTGTCCGGTTCT	NA	False	NA	NA	False	NA	NA	NA	75988025	75998268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_75988295_75995288_75995418_75997362
tx.5572	chr13	-	5017	12	FSM	ENSMUSG00000021589.14	ENSMUST00000022078.12	4980	12	-37	0	21	0	multi-exon	FALSE	canonical	3	85	junction_5	11.3494456849386	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAATGAAGTGTTCTGTA	6609	False	NA	NA	False	NA	NA	NA	76092023	76017655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
tx.5573	chr13	-	4748	12	NIC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	125	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	31.2534295638756	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAATGAAGTGTTCTG	6771	False	NA	NA	False	NA	NA	NA	76091861	76017657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_76020581_76024289_76024387_76025491_76025659_76027020_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
tx.5574	chr13	-	1572	4	FSM	ENSMUSG00000043190.15	ENSMUST00000050997.2	2807	4	1	1234	1	-2	multi-exon	FALSE	canonical	3	34	junction_3	20.2703943940144	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAGTAATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	76166680	76150887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76165639
tx.5575	chr13	-	3221	8	FSM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	2	434	2	-434	multi-exon	TRUE	canonical	3	9	junction_3	7.18558647997674	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAATCTCTATTTTGTGC	9778	False	NA	NA	False	NA	NA	NA	76246777	76208974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76239776_76239937_76242006_76242137_76246492
tx.5576	chr13	+	6538	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	51	387	51	-177	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCAGTATTTCATTG	NA	False	NA	NA	False	NA	NA	NA	76246903	76338048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
tx.5577	chr13	+	1979	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	1	-172	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTATTTCATTGTTATT	NA	False	NA	NA	False	NA	NA	NA	76328544	76338053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
tx.5578	chr13	-	3595	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	34.3358836872922	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATAGTCTTTAGTTG	NA	False	NA	NA	False	NA	NA	NA	77283584	77191206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
tx.5579	chr13	-	3755	21	FSM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	-9	1	-9	-1	multi-exon	FALSE	canonical	3	56	junction_14	27.7961777947976	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	77283601	77191207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
tx.558	chr1	+	5572	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_28	64.6690554646801	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4062	False	NA	NA	False	NA	NA	NA	87781000	87872212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
tx.5580	chr13	-	3607	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	35.2448499214194	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	77283597	77191207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
tx.5581	chr13	+	636	3	FSM	ENSMUSG00000071252.7	ENSMUST00000225992.2	616	3	-17	-3	-6	3	multi-exon	FALSE	canonical	3	44	junction_1	11	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGACTTACACTGTGAT	NA	False	NA	NA	False	NA	NA	NA	77283652	77332126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_77283750_77322971_77323104_77331719
tx.5582	chr13	+	3795	19	ISM	ENSMUSG00000071252.7	ENSMUST00000168779.3	5051	20	1	279418	1	72397	5prime_fragment	FALSE	canonical	1	2	junction_10	16.7199149386459	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTGAGCTCTGGGGC	NA	False	NA	NA	False	NA	NA	NA	77283659	77482485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672_77341343_77393319_77393482_77402241_77402337_77407959_77408188_77410007_77410274_77411650_77411802_77415780_77415972_77417880_77418064_77429160_77429272_77446585_77446726_77451414_77451580_77464466_77464692_77471483_77471890_77475985_77476143_77480421_77480578_77482387
tx.5583	chr13	+	1901	4	FSM	ENSMUSG00000071252.7	ENSMUST00000225605.2	1539	4	4	-366	4	366	multi-exon	FALSE	canonical	3	23	junction_3	17.5562587763516	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTGACAGATGAATTT	NA	False	NA	NA	False	NA	NA	NA	77283676	77342199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672
tx.5584	chr13	+	3880	10	FSM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	15	-3	-5	3	multi-exon	TRUE	canonical	3	89	junction_7	8.92907582349531	166	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTCTTCTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	77856823	78314357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
tx.5585	chr13	+	4097	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	2	2	2	-2	multi-exon	TRUE	canonical	3	173	junction_5	15.8461995701281	336	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTGGCAGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	81031530	81044159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
tx.5586	chr13	-	2638	9	FSM	ENSMUSG00000069170.15	ENSMUST00000128585.9	2580	9	-37	-21	-22	21	multi-exon	FALSE	canonical	3	10	junction_1	12.4172259381876	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGATTTCTACTGTGGT	2335	False	NA	NA	False	NA	NA	NA	81781295	81725533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_81726512_81726838_81727116_81727403_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
tx.5587	chr13	-	1618	7	FSM	ENSMUSG00000069170.15	ENSMUST00000146749.2	1592	7	-26	0	-13	0	multi-exon	FALSE	canonical	3	24	junction_1	8.51958527942137	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAAAGTGTATATGA	2344	False	NA	NA	False	NA	NA	NA	81781286	81727159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
tx.5588	chr13	-	742	3	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	53	junction_2	15	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGTACTTGTGAACTG	NA	False	NA	NA	False	NA	NA	NA	81792384	81784031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_-_81784533_81785816_81786000_81792326
tx.5589	chr13	+	4233	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	11	6	11	-6	multi-exon	FALSE	canonical	3	66	junction_2	12	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGGAAGTTGTTGAA	300	False	NA	NA	False	NA	NA	NA	81805792	81820984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_81806056_81813123_81813389_81817279
tx.559	chr1	-	5310	32	FSM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-13	-1320	3	-2	multi-exon	FALSE	canonical	3	37	junction_30	6.87528260700014	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCTGTCATATACTGC	NA	False	NA	NA	False	NA	NA	NA	87936269	87872844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
tx.5590	chr13	+	4172	3	FSM	ENSMUSG00000035840.8	ENSMUST00000049055.8	2338	3	-147	-1687	19	0	multi-exon	FALSE	canonical	2	14	junction_2	38	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	308	False	NA	NA	False	NA	NA	NA	81805800	81820990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_81806056_81813123_81813389_81817338
tx.5591	chr13	-	3043	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	13	-2	2	2	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	361	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTTGCAGTGAACATT	NA	False	NA	NA	False	NA	NA	NA	81859119	81821959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
tx.5592	chr13	+	4107	2	FSM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	-158	8	-158	-8	multi-exon	FALSE	canonical	3	18	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCAAGTGGTGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	81859301	81901386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_81860102_81898079
tx.5593	chr13	+	931	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	174	121	-27	118	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	372	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTTTGGTAAATTT	NA	False	NA	NA	False	NA	NA	NA	81931369	81945153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
tx.5594	chr13	+	5322	4	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	174	236	-27	3	intron_retention	FALSE	canonical	3	1314	junction_2	35.311313893551	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	NA	False	NA	NA	NA	81931369	81945038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074
tx.5595	chr13	+	2480	11	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_9	71.7933840963079	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	84370420	84443989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
tx.5596	chr13	+	2432	11	FSM	ENSMUSG00000035762.12	ENSMUST00000225069.2	2414	11	-16	-2	-2	2	multi-exon	FALSE	canonical	0	0	junction_9	81.3373223065525	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTGTAATTTATTTG	NA	False	NA	NA	False	NA	NA	NA	84370428	84443987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
tx.5597	chr13	+	2583	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	3	271	3	0	multi-exon	FALSE	canonical	0	0	junction_10	57.0470300398157	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	84370421	84443989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
tx.5598	chr13	+	1928	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	-61	-812	8	-1	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCAGTGTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	85337534	85361841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
tx.5599	chr13	+	2017	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	21	7	-6	-7	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	396	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTAGACCAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	85337547	85361835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
tx.56	chr1	-	8045	22	FSM	ENSMUSG00000005886.15	ENSMUST00000068304.13	8006	22	-6	-33	-6	-21	multi-exon	FALSE	canonical	3	14	junction_10	11.9773027979143	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGCTTTAGAGATTTTA	NA	False	NA	NA	False	NA	NA	NA	13444313	13209349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
tx.560	chr1	-	6980	4	ISM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	4172	640	-342	-640	intron_retention	FALSE	canonical	3	369	junction_1	35.6931365951495	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	4577	False	NA	NA	False	NA	NA	NA	88201183	88190832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923
tx.5600	chr13	+	1856	9	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	310.456921327259	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCAGTGTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	85337534	85361841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345649_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
tx.5601	chr13	-	4591	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-322	294	-221	-294	multi-exon	TRUE	canonical	3	186	junction_11	23.7235232534199	345	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGATTAGCTTACTATT	NA	False	NA	NA	False	NA	NA	NA	85437470	85363192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
tx.5602	chr13	-	1156	2	FSM	ENSMUSG00000017778.15	ENSMUST00000132233.2	709	2	-442	-5	-15	0	multi-exon	FALSE	canonical	3	10515	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	False	NA	NA	False	NA	NA	NA	86194908	86192934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_86193028_86193845
tx.5603	chr13	-	427	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	114	-1	-16	1	multi-exon	FALSE	canonical	3	10515	junction_1	2196	841	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCCTCGTCTCTGCAA	NA	False	NA	NA	False	NA	NA	NA	86194909	86192933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_86193028_86193845_86193989_86194719
tx.5604	chr13	-	6205	8	ISM	ENSMUSG00000021614.17	ENSMUST00000109546.9	12427	15	50865	0	-12736	0	3prime_fragment	FALSE	canonical	3	44	junction_4	6.41108733494768	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGACTTGTCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	89839763	89803430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403
tx.5605	chr13	-	8714	14	FSM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-263	-119	-76	119	multi-exon	TRUE	canonical	3	34	junction_8	8.56786344567119	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTATTGGATGTTAT	2530	False	NA	NA	False	NA	NA	NA	89890704	89804339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
tx.5606	chr13	-	3814	6	FSM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-262	-1279	-71	736	multi-exon	FALSE	canonical	3	48	junction_2	6.6932802122726	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTCTAATGACCTCTT	2535	False	NA	NA	False	NA	NA	NA	89890699	89858065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
tx.5607	chr13	-	2846	3	ISM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-260	12174	-69	2034	5prime_fragment	FALSE	canonical	3	54	junction_2	6.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGATTTGCCTCTTGC	2537	False	NA	NA	False	NA	NA	NA	89890697	89871518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_89873783_89879577_89879654_89890191
tx.5608	chr13	-	1472	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	72	-4	0	4	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTATTTAACTGAACT	NA	False	NA	NA	False	NA	NA	NA	90237655	89997035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
tx.5609	chr13	+	3739	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	572	4378	-39	3218	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	448	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGCCGTCTAGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	90237813	90255998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
tx.561	chr1	-	4320	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-22	-640	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	155.65807881379	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8623	False	NA	NA	False	NA	NA	NA	88205323	88190832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88198877_88198992_88200450_88200488_88202763_88202820_88204940_88205008_88205095
tx.5610	chr13	+	2755	3	ISM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	9238	5274	8599	2322	3prime_fragment	FALSE	canonical	3	1303	junction_2	6	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTATGAAGTATAATGTG	NA	False	NA	NA	False	NA	NA	NA	90246479	90255102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_90246591_90249026_90249062_90252493
tx.5611	chr13	+	532	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	179	226	-80	0	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	1024	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATTTTGTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	91071255	91072843	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
tx.5612	chr13	-	1713	8	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	6064	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	7.14856914468389	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAATTGACTACTGTTAC	4944	False	NA	NA	False	NA	NA	NA	91366014	91083476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91365852
tx.5613	chr13	+	1709	17	FSM	ENSMUSG00000003992.16	ENSMUST00000004094.15	3957	17	63	2185	-14	8	multi-exon	FALSE	canonical	3	38	junction_13	7.3396930283221	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACTGTGTCTGAAGCAA	2784	False	NA	NA	False	NA	NA	NA	91609231	91849363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
tx.5614	chr13	+	1640	17	NNC	ENSMUSG00000003992.16	novel	3957	17	NA	NA	-4	9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	14.7049098943176	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTGTCTGAAGCAAG	2758	False	NA	NA	False	NA	NA	NA	91609205	91849364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_91609272_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
tx.5615	chr13	-	1446	5	ISM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	1544	0	1500	0	3prime_fragment	FALSE	canonical	3	84	junction_2	32.5451609306207	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	NA	NA	NA	91954280	91944651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869
tx.5616	chr13	-	1531	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	10	0	10	0	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	NA	NA	NA	91955814	91944651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
tx.5617	chr13	+	1444	5	NIC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	421	-3366	combination_of_known_splicesites	TRUE	canonical	3	22	junction_4	636.728896391549	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTCATCTCAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	92491654	92522195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92521232
tx.5618	chr13	+	1557	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	421	3369	421	-3369	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	652	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTCCTCATCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	92491654	92522192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
tx.5619	chr13	-	6763	16	ISM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	7535	-890	-1675	890	3prime_fragment	FALSE	canonical	3	21	junction_14	8.3495841546484	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTGTAGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	92659841	92622725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623
tx.562	chr1	-	4208	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	32	638	-22	-638	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	427	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8623	False	NA	NA	False	NA	NA	NA	88205323	88190830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
tx.5620	chr13	-	5952	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	9.64931992422264	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCATTTTGTTTACATA	NA	False	NA	NA	False	NA	NA	NA	92667340	92623615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
tx.5621	chr13	-	6088	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	48	14	48	-14	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTACATATCAGGCTC	NA	False	NA	NA	False	NA	NA	NA	92667328	92623629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
tx.5622	chr13	+	5372	12	FSM	ENSMUSG00000021703.10	ENSMUST00000049488.9	5366	12	-6	0	-6	0	multi-exon	FALSE	canonical	3	40	junction_8	5.03377025451168	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGTTTGTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	92747592	92848455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
tx.5623	chr13	-	3283	16	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_12	149.683666443604	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	93328920	93282790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
tx.5624	chr13	-	3109	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-119	0	-17	0	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	93328910	93282790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
tx.5625	chr13	+	6133	5	FSM	ENSMUSG00000007617.19	ENSMUST00000102752.10	5713	5	-423	3	-30	-3	multi-exon	FALSE	canonical	3	39	junction_1	6.83282518435822	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTCTAGTATATTGAT	NA	False	NA	NA	False	NA	NA	NA	93440579	93496967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447
tx.5626	chr13	+	5013	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1075	-1173	-18	-166	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTCTGGAGAATGTA	NA	False	NA	NA	False	NA	NA	NA	93440591	93541471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
tx.5627	chr13	+	5025	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-692	-1281	5	-167	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTCTCTGGAGAATGT	NA	False	NA	NA	False	NA	NA	NA	93440614	93541470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
tx.5628	chr13	-	1956	8	FSM	ENSMUSG00000074768.7	ENSMUST00000099309.6	2490	8	316	218	-79	-218	multi-exon	FALSE	canonical	1	3	junction_5	5.15474815790535	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGTGGTCCATTAA	NA	False	NA	NA	False	NA	NA	NA	93774153	93753400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_93754171_93756589_93756819_93757901_93758085_93761321_93761470_93761804_93761997_93763754_93763874_93769743_93769877_93773971
tx.5629	chr13	-	1968	8	FSM	ENSMUSG00000042118.8	ENSMUST00000015941.8	2467	8	-36	535	-36	-535	multi-exon	FALSE	canonical	3	8	junction_1	2.60298102261266	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTAGCTTGAATGGCA	NA	False	NA	NA	False	NA	NA	NA	93810846	93792762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93803081_93803274_93805762_93805855_93807920_93808054_93810745
tx.563	chr1	-	4152	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-22	-640	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.33431590427	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8623	False	NA	NA	False	NA	NA	NA	88205323	88190832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_88193999_88194052_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
tx.5630	chr13	+	3022	16	FSM	ENSMUSG00000042102.8	ENSMUST00000048001.8	2992	16	-39	9	-39	-9	multi-exon	FALSE	canonical	2	5	junction_1	2.8720878971384	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCAATGACAGGGACAGA	2435	False	NA	NA	False	NA	NA	NA	93810901	93889332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_93811041_93813542_93813712_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
tx.5631	chr13	+	2692	15	NNC	ENSMUSG00000042102.8	novel	2992	16	NA	NA	9094	-194	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3.06394436993246	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTTTTATTACTTTT	NA	False	NA	NA	False	NA	NA	NA	93820034	93889147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_93820198_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
tx.5632	chr13	+	4005	8	FSM	ENSMUSG00000042082.8	ENSMUST00000091403.6	4038	8	33	0	33	0	multi-exon	FALSE	canonical	0	0	junction_4	3.27014946921703	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTTGGACATGGGG	NA	False	NA	NA	False	NA	NA	NA	93908170	94079524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_93908601_93926546_93926734_93930535_93930727_93944003_93944212_93998594_93998839_94016995_94017067_94075734_94075858_94076973
tx.5633	chr13	+	4489	4	FSM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	-140	-1	-140	1	multi-exon	FALSE	canonical	3	77	junction_1	5.35412613473634	134	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	2086	False	NA	NA	False	NA	NA	NA	94194163	94331918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_94194415_94257284_94257344_94310530_94311147_94328355
tx.5634	chr13	-	3724	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	412	123	412	-123	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	247	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTGTATAATTTTA	NA	False	NA	NA	False	NA	NA	NA	94421925	94337940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
tx.5635	chr13	+	4021	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	-2	2	-2	2	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	900	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	NA	False	NA	NA	NA	94495465	94702823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
tx.5636	chr13	+	525	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	11	23	11	-1	multi-exon	FALSE	canonical	3	1242	junction_3	49.6185449202211	236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTGTTTGTTTTATAC	NA	False	NA	NA	False	NA	NA	NA	94925428	94979407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
tx.5637	chr13	+	3036	13	NIC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.8981186600383	79	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTGGGTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	95112877	95159820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
tx.5638	chr13	-	2414	4	ISM	ENSMUSG00000021684.18	ENSMUST00000162882.2	2060	9	12897	-876	1084	0	3prime_fragment	TRUE	canonical	1	2	junction_3	2.44948974278318	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTTTTAGTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	95169677	95160961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_95162738_95164125_95164256_95166820_95166989_95169337
tx.5639	chr13	+	2210	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	-315	-1	-315	1	multi-exon	FALSE	canonical	3	65	junction_1	0	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	False	NA	NA	False	NA	NA	NA	95461429	95474350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_95461853_95472563
tx.564	chr1	-	4129	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-24	-640	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	112.85241099182	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8621	False	NA	NA	False	NA	NA	NA	88205325	88190832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
tx.5640	chr13	-	3250	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	-2	1	-2	-1	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	624	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTTCTTTGTATTTG	NA	False	NA	NA	False	NA	NA	NA	95511862	95487191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
tx.5641	chr13	-	1393	6	ISM	ENSMUSG00000021680.9	ENSMUST00000045583.9	1701	7	618	-1	618	1	3prime_fragment	FALSE	canonical	1	1	junction_1	0.748331477354788	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCTCGACTGTCTGATGT	NA	False	NA	NA	False	NA	NA	NA	95580721	95567883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_95568603_95572912_95573031_95576575_95576725_95578575_95578787_95580244_95580403_95580683
tx.5642	chr13	-	2773	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	-18	-14	-18	14	multi-exon	FALSE	canonical	3	40	junction_1	0	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCTTTCAGGCTGTGT	9808	False	NA	NA	False	NA	NA	NA	95661753	95648225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_95650790_95661544
tx.5643	chr13	-	3343	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	7	-14	7	14	multi-exon	FALSE	canonical	3	48	junction_1	0	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGAATAGATTGTTCC	NA	False	NA	NA	False	NA	NA	NA	95754988	95738296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_95741446_95754794
tx.5644	chr13	-	3918	22	ISM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	207003	2	-2055	-2	3prime_fragment	FALSE	canonical	3	48	junction_11	9.63906450989153	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTAGAGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95821500	95763683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361
tx.5645	chr13	-	5893	36	FSM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	-49	3	-49	-3	multi-exon	FALSE	canonical	3	39	junction_26	10.4750042618471	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGGTAGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	96028552	95763684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
tx.5646	chr13	+	2990	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	29	2164	29	-1613	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGATGTAAGTAGAATA	NA	False	NA	NA	False	NA	NA	NA	96524830	96552081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
tx.5647	chr13	-	4406	10	ISM	ENSMUSG00000047117.14	ENSMUST00000239137.2	3003	14	25017	-1671	-126	1359	3prime_fragment	FALSE	canonical	0	0	junction_3	2.67129228448251	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGATGGGGAAGTCTC	NA	False	NA	NA	False	NA	NA	NA	96582651	96551282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_96554409_96556172_96556305_96557227_96557430_96561240_96561337_96566293_96566393_96569809_96569909_96572380_96572480_96578064_96578164_96580786_96580886_96582296
tx.5648	chr13	-	3332	14	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	10.888352171828	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTGACTGTCATATT	NA	False	NA	NA	False	NA	NA	NA	96679014	96617196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_96618763_96618965_96619000_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
tx.5649	chr13	-	4255	15	FSM	ENSMUSG00000021668.16	ENSMUST00000022172.12	4225	15	-29	-1	-29	1	multi-exon	FALSE	canonical	3	26	junction_7	5.85191404236116	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTGACTGTCATATT	NA	False	NA	NA	False	NA	NA	NA	96679022	96617196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
tx.565	chr1	+	389	2	NIC	ENSMUSG00000097398.3	novel	358	3	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTCTTGGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	88682587	88683458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_88682774_88683255
tx.5650	chr13	+	4020	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	-5	1270	-5	882	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTGTATTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	96679237	96775405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
tx.5651	chr13	+	4088	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	10	-1352	-1	887	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTTTATTTTGCAAT	NA	False	NA	NA	False	NA	NA	NA	96679252	96775410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
tx.5652	chr13	-	4384	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	42	-1	-19	1	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	1165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTAAGCAGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	96807402	96785473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
tx.5653	chr13	+	5286	25	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	40	-245	combination_of_known_splicesites	FALSE	canonical	2	5	junction_13	3.76017139089283	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGCTTTTATTGTCA	NA	False	NA	NA	False	NA	NA	NA	96884819	97046302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
tx.5654	chr13	+	5101	3	FSM	ENSMUSG00000091387.3	ENSMUST00000171324.3	5087	3	-6	-8	-6	8	multi-exon	FALSE	canonical	3	6	junction_1	3	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGGACTTGTGAGCTT	NA	False	NA	NA	False	NA	NA	NA	97061190	97087422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_97061457_97072387_97072505_97082704
tx.5655	chr13	+	4586	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-370	2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	73.6283837177545	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTCTTCTCTGTGTGT	8347	False	NA	NA	False	NA	NA	NA	97207780	97266025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_97207887_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
tx.5656	chr13	+	4857	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-303	-7	-303	7	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	386	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTCTGTGTGTTCACA	8414	False	NA	NA	False	NA	NA	NA	97207847	97266030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
tx.5657	chr13	+	5991	12	ISM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-225	2384	-225	-2384	intron_retention	FALSE	canonical	3	256	junction_9	16.9856526720116	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAACCTTCCACTGGA	8492	False	NA	NA	False	NA	NA	NA	97207925	97263639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199
tx.5658	chr13	+	5431	12	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-75	-589	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	80.1011756911685	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAACAATTTAAAG	8642	False	NA	NA	False	NA	NA	NA	97208075	97266932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_97208220_97228325_97228461_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
tx.5659	chr13	+	4746	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	82	4	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	74.1676029903443	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTTCTCTGTGTGTTC	8799	False	NA	NA	False	NA	NA	NA	97208232	97266027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_97208497_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
tx.566	chr1	+	3744	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	-8	1259	-8	-1259	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	244	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCCTTTTCAAATTATG	NA	False	NA	NA	False	NA	NA	NA	88998128	89081531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
tx.5660	chr13	-	192	2	Antisense	novelGene_ENSMUSG00000021666.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1032	junction_1	0	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGCTTCTATTCTCAT	NA	False	NA	NA	False	NA	NA	NA	97296457	97237175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr13_-_97237317_97296406
tx.5661	chr13	-	1075	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	65	1560	1	0	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	181	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGGCATAACGGTTTA	NA	False	NA	NA	False	NA	NA	NA	97274380	97267491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
tx.5662	chr13	+	3124	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	43.0145033680502	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	NA	NA	NA	97274485	97312959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
tx.5663	chr13	+	3043	20	FSM	ENSMUSG00000021666.17	ENSMUST00000042084.13	3074	20	41	-10	0	0	multi-exon	FALSE	canonical	2	7	junction_10	59.2215428348002	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	NA	NA	NA	97274485	97312959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
tx.5664	chr13	+	3152	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	5	0	-2	0	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	NA	NA	NA	97274490	97312959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
tx.5665	chr13	+	3074	20	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	51.7295331347379	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	NA	NA	NA	97274487	97312959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
tx.5666	chr13	-	1793	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	28	84	28	-84	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	1575	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTATCCCTGAATCAA	NA	False	NA	NA	False	NA	NA	NA	97334837	97312922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
tx.5667	chr13	-	3074	4	ISM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	17773	86	17711	-86	intron_retention	FALSE	canonical	3	2329	junction_3	68.7475252079827	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	NA	False	NA	NA	NA	97317092	97312924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387
tx.5668	chr13	+	3504	5	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	82.6755707570259	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATATTGCGAACTCAAG	NA	False	NA	NA	False	NA	NA	NA	97619208	97633510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_97619286_97619456_97619541_97625686_97625857_97629663_97630239_97630912
tx.5669	chr13	+	3261	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	48	629	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCACTGTGATAATTCTG	NA	False	NA	NA	False	NA	NA	NA	97619256	97634144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_97619286_97630912
tx.567	chr1	+	5080	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	60948	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	49.7462310130124	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAAATTTTATTTGGAC	NA	False	NA	NA	False	NA	NA	NA	89059122	89082782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_89059478_89065280_89065526_89071271_89073629_89079921_89080111_89080848
tx.5670	chr13	+	2760	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	14	-10	14	10	multi-exon	FALSE	canonical	3	54	junction_2	70.5	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACCTCTTCCTATACT	NA	False	NA	NA	False	NA	NA	NA	97619222	97633525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_97619286_97619456_97619541_97630912
tx.5671	chr13	+	2824	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	NA	False	NA	NA	NA	97619228	97633515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
tx.5672	chr13	+	3321	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	NA	False	NA	NA	NA	97619226	97633515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
tx.5673	chr13	+	3206	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	71.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	NA	False	NA	NA	NA	97619257	97633515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_97619286_97629663_97630239_97630912
tx.5674	chr13	+	3163	2	NNC	ENSMUSG00000078952.10	novel	2726	2	NA	NA	10225	9	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGACCTCTTCCTATAC	NA	False	NA	NA	False	NA	NA	NA	97629687	97633524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_97630239_97630912
tx.5675	chr13	-	4095	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	49	-24	21	24	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	658	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGAAGTAGTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	98399500	98383328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
tx.5676	chr13	+	1497	8	FSM	ENSMUSG00000021661.17	ENSMUST00000226100.2	1476	8	-26	5	-26	-5	multi-exon	FALSE	canonical	3	36	junction_1	57.4651624722247	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCTCTGATTATATGC	NA	False	NA	NA	False	NA	NA	NA	98399620	98410421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_98399985_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
tx.5677	chr13	+	1882	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	-128	1	-25	-1	multi-exon	FALSE	canonical	3	142	junction_1	23.3559414282533	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGATTATATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	98399621	98410425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
tx.5678	chr13	+	2406	8	FSM	ENSMUSG00000021661.17	ENSMUST00000123924.8	2328	8	-83	5	-28	-5	multi-exon	TRUE	canonical	3	142	junction_1	24.7839645327212	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCTCTGATTATATGC	NA	False	NA	NA	False	NA	NA	NA	98399618	98410421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
tx.5679	chr13	+	3191	7	NIC	ENSMUSG00000021661.17	novel	2328	8	NA	NA	-25	0	intron_retention	FALSE	canonical	3	142	junction_1	23.1276650116022	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	98399621	98410426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_98399985_98402658_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
tx.568	chr1	+	5150	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	63088	-8	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	47.2566132938026	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAAATTTTATTTGGAC	NA	False	NA	NA	False	NA	NA	NA	89061262	89082782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_89061688_89065280_89065526_89071271_89073629_89079921_89080111_89080848
tx.5680	chr13	-	867	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	21	0	11	0	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	1781	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	NA	False	NA	NA	NA	98453493	98446404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
tx.5681	chr13	-	705	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1169	-5	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	24.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATCCTCCTCCATCTTT	NA	False	NA	NA	False	NA	NA	NA	98854187	98849586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_98850076_98852942_98853093_98854121
tx.5682	chr13	-	6639	5	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	40213	1	19496	-1	3prime_fragment	FALSE	canonical	3	465	junction_2	23.9739441894737	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	98987335	98975527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615
tx.5683	chr13	-	7314	14	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	27203	0	6486	0	3prime_fragment	TRUE	canonical	3	423	junction_13	30.5844451318586	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	99000345	98975526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215
tx.5684	chr13	-	8420	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	326	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	99027536	98975527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
tx.5685	chr13	-	8420	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	32	1	2	-1	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	347	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	99062860	98975527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
tx.5686	chr13	-	8325	23	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	242	2	200	-2	3prime_fragment	FALSE	canonical	3	423	junction_13	40.8636110830137	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTTGCACTCTTGATT	NA	False	NA	NA	False	NA	NA	NA	99027306	98975528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184
tx.5687	chr13	-	8402	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	-2	combination_of_known_junctions	TRUE	canonical	3	32	junction_23	102.017993890807	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTTGCACTCTTGATT	NA	False	NA	NA	False	NA	NA	NA	99027536	98975528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
tx.5688	chr13	+	1731	2	FSM	ENSMUSG00000097848.3	ENSMUST00000181742.2	1723	2	-7	-1	-7	1	multi-exon	FALSE	canonical	3	15	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACGACTGGTCTTTAGCT	6933	False	NA	NA	False	NA	NA	NA	99237206	99244089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_99237334_99242485
tx.5689	chr13	-	1688	10	FSM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	14	2	14	-2	multi-exon	FALSE	canonical	3	306	junction_5	28.5894740191448	276	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGTTGTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	99481199	99456156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
tx.569	chr1	+	4653	4	ISM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	67224	0	67186	0	3prime_fragment	FALSE	canonical	3	96	junction_1	16.0069429380573	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGACATTTCAAC	NA	False	NA	NA	False	NA	NA	NA	89065360	89082790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_89065526_89071271_89073629_89079921_89080111_89080848
tx.5690	chr13	+	1968	12	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_6	174.354630538115	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	99481297	99552070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99537777_99537901_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
tx.5691	chr13	+	1844	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	5	0	3	0	multi-exon	FALSE	canonical	3	414	junction_10	37.2860563750043	523	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	99481298	99552070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
tx.5692	chr13	-	11824	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-36	20	-36	-20	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCATGTGTTGAGACATC	NA	False	NA	NA	False	NA	NA	NA	99653084	99557973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
tx.5693	chr13	-	8850	3	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	83214	20	10618	-20	3prime_fragment	FALSE	canonical	3	84	junction_1	0	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCATGTGTTGAGACATC	NA	False	NA	NA	False	NA	NA	NA	99569834	99557973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_99562470_99563726_99563966_99565719
tx.5694	chr13	-	8918	5	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	71982	2813	-91	-2813	3prime_fragment	FALSE	canonical	3	46	junction_3	18.280795934532	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAAGTCTGATATTGA	4599	False	NA	NA	False	NA	NA	NA	99581066	99560766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721
tx.5695	chr13	-	2123	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	1	-1	1	1	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	308	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTGTTGAGAT	670	False	NA	NA	False	NA	NA	NA	100152146	100085039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
tx.5696	chr13	+	536	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	60	5	-13	2	multi-exon	FALSE	canonical	3	69	junction_1	3	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGGTGAATATTATT	NA	False	NA	NA	False	NA	NA	NA	100244579	100250741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_100244738_100245530_100245640_100250472
tx.5697	chr13	+	1212	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	13	-3	7	3	multi-exon	TRUE	canonical	3	544	junction_6	97.8154352594722	356	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACTTTATAGATATTT	NA	False	NA	NA	False	NA	NA	NA	100261372	100274201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
tx.5698	chr13	-	2000	17	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	-9	449	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	76.8251871133419	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGTCTTCTTAAAACAA	NA	False	NA	NA	False	NA	NA	NA	100629096	100596276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
tx.5699	chr13	-	1571	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-29	114	-11	114	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTATTTTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	100629098	100605201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
tx.57	chr1	-	8140	22	NNC	ENSMUSG00000005886.15	novel	8171	22	NA	NA	157	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_21	15.9131714294578	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCATTTAATAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	13444096	13209384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13443814
tx.570	chr1	+	2635	3	ISM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	73729	1259	73691	-1259	3prime_fragment	FALSE	canonical	3	112	junction_2	11.5	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCCTTTTCAAATTATG	1383	False	NA	NA	False	NA	NA	NA	89071865	89081531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_89073629_89079921_89080111_89080848
tx.5700	chr13	-	1496	16	ISM	ENSMUSG00000021639.18	ENSMUST00000145266.8	1630	18	-58	8571	-22	19	5prime_fragment	FALSE	canonical	3	30	junction_15	76.4776219992925	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGATCTGATTTAAGA	NA	False	NA	NA	False	NA	NA	NA	100628904	100605296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628750
tx.5701	chr13	-	3239	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	0	-400	0	400	multi-exon	FALSE	canonical	3	16	junction_8	20.6272726020674	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGTCAATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	100689226	100633870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
tx.5702	chr13	-	3216	9	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	7	456	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAGTACAAAAAAGTATTT	NA	False	NA	NA	False	NA	NA	NA	100688999	100633814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
tx.5703	chr13	-	3964	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	10	78	-7	-78	multi-exon	FALSE	canonical	3	42	junction_8	12.8640730330638	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCTCCCCCAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	100688996	100633092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
tx.5704	chr13	-	3352	7	FSM	ENSMUSG00000021636.16	ENSMUST00000225754.2	3111	7	-240	-1	-12	-1	multi-exon	FALSE	canonical	1	3	junction_4	3.97562014729219	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGTGCTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	100753450	100732465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753112
tx.5705	chr13	-	3063	7	FSM	ENSMUSG00000021636.16	ENSMUST00000022137.14	3061	7	-4	2	-4	0	multi-exon	FALSE	canonical	1	3	junction_4	4.71404520791032	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGCTCCTTA	NA	False	NA	NA	False	NA	NA	NA	100753483	100732466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753433
tx.5706	chr13	-	2839	17	FSM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_16	42.8397723354128	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	100787559	100753671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787329
tx.5707	chr13	-	2716	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-9	-315	-5	0	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	283	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	100787564	100753671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
tx.5708	chr13	+	1206	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	17	-1	-2	1	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	452	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	NA	NA	NA	100787867	100792568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_100787954_100790698_100790792_100791541
tx.5709	chr13	+	922	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	382	-6	-1	6	multi-exon	FALSE	canonical	3	650	junction_4	426.823734110464	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTTAATAGTAGGTGAT	NA	False	NA	NA	False	NA	NA	NA	100787868	100802873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
tx.571	chr1	+	4384	19	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	-27	-26	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	123.248268963378	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTGATTTTTGCACA	NA	False	NA	NA	False	NA	NA	NA	89382500	89817697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
tx.5710	chr13	+	1244	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	-14	0	9	0	multi-exon	FALSE	canonical	3	171	junction_1	554	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	100788100	100792567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_100788226_100790698_100790792_100791541
tx.5711	chr13	+	2461	12	FSM	ENSMUSG00000048924.15	ENSMUST00000057325.15	2413	12	-48	0	8	0	multi-exon	FALSE	canonical	1	1	junction_1	5.01073228346206	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTTTCAATGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	100806232	100833748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_100806360_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618
tx.5712	chr13	-	1309	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	21	658	11	21	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	389	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGATAACTGCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	100867426	100839796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
tx.5713	chr13	-	1389	11	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	195	660	156	19	3prime_fragment	FALSE	canonical	3	644	junction_3	46.9835077447395	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAGGATAACTGCAGTC	NA	False	NA	NA	False	NA	NA	NA	100867252	100839798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965
tx.5714	chr13	-	677	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	18	6	16	-6	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATGTCCCTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	100881149	100872468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
tx.5715	chr13	-	1228	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	18	5	18	-5	multi-exon	TRUE	canonical	3	285	junction_6	26.2865816530031	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTTGCAGGACTGGAG	NA	False	NA	NA	False	NA	NA	NA	100912389	100896186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
tx.5716	chr13	-	2675	5	FSM	ENSMUSG00000041431.17	ENSMUST00000134080.2	1075	5	-730	-870	-730	-7	multi-exon	FALSE	canonical	3	3352	junction_4	271.501726513847	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	NA	False	NA	NA	NA	100919271	100915246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132
tx.5717	chr13	-	4013	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-13	-4	intron_retention	FALSE	canonical	3	2476	junction_5	479.670550205757	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCATTTGCCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	100923007	100915243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100920156_100921964_100922127_100922240_100922412_100922889
tx.5718	chr13	-	2331	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	71	87	-13	-5	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	3670	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTCTCATTTGCCCTTTT	NA	False	NA	NA	False	NA	NA	NA	100923007	100915244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
tx.5719	chr13	-	3194	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-15	0	-15	0	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	356	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	NA	False	NA	NA	False	NA	NA	NA	100969950	100939155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
tx.572	chr1	+	4303	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	-20	7638	-20	-22	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGATTTTTGCACAGACA	NA	False	NA	NA	False	NA	NA	NA	89382507	89817701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
tx.5720	chr13	-	6920	16	FSM	ENSMUSG00000041417.16	ENSMUST00000055518.13	7113	16	-5	198	-5	-198	multi-exon	FALSE	canonical	2	8	junction_10	7.37443029814658	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCATTTGAAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	101904730	101817268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
tx.5721	chr13	-	5623	3	FSM	ENSMUSG00000032621.9	ENSMUST00000210269.2	619	3	-3005	-1999	1533	0	multi-exon	FALSE	canonical	3	193	junction_2	15	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	NA	False	NA	NA	False	NA	NA	NA	103888639	103878119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_103880225_103881292_103881438_103885266
tx.5722	chr13	-	3864	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	70	0	68	0	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	317	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9987	False	NA	NA	False	NA	NA	NA	103911046	103878119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
tx.5723	chr13	-	3641	9	ISM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	34	8695	32	2161	5prime_fragment	FALSE	canonical	3	167	junction_7	26.6760074786314	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CACAAAAAAAAAAAAAAAAA	9988	False	NA	NA	False	NA	NA	NA	103911082	103886814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
tx.5724	chr13	-	4106	2	ISM	ENSMUSG00000021709.15	ENSMUST00000053927.12	6103	25	64392	0	64392	0	intron_retention	FALSE	canonical	3	93	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	103961408	103955298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_103957315_103959318
tx.5725	chr13	-	6763	24	FSM	ENSMUSG00000021709.15	ENSMUST00000188997.7	5084	24	-863	-816	-644	0	multi-exon	FALSE	canonical	3	24	junction_3	14.3384686218459	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	104057666	103955298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
tx.5726	chr13	-	7058	26	FSM	ENSMUSG00000021709.15	ENSMUST00000091269.11	6224	26	-834	0	-615	0	multi-exon	FALSE	canonical	3	35	junction_5	14.0566852422611	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	104057637	103955298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
tx.5727	chr13	-	4344	14	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-29	6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	111.564134976334	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCACAGTACTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	104246151	104159558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104212018_104212166_104245923
tx.5728	chr13	-	4184	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-21	-1	-21	1	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	355	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGCTCACAGTACTTT	NA	False	NA	NA	False	NA	NA	NA	104246143	104159563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
tx.5729	chr13	-	3925	12	NIC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-22	1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	87.8224166116154	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGCTCACAGTACTTT	NA	False	NA	NA	False	NA	NA	NA	104246144	104159563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104245923
tx.573	chr1	+	4139	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	-87	26	-19	-26	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTGATTTTTGCACA	NA	False	NA	NA	False	NA	NA	NA	89382508	89817697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
tx.5730	chr13	+	3788	11	FSM	ENSMUSG00000042743.14	ENSMUST00000044385.14	3048	11	17	-757	-15	757	multi-exon	FALSE	canonical	3	36	junction_7	16.2775919595006	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTTGTCTTTGACTTA	NA	False	NA	NA	False	NA	NA	NA	104246265	104279000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
tx.5731	chr13	-	3496	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	36	6	-8	1	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGGATCTGAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	104314941	104278662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
tx.5732	chr13	-	3505	12	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	-7	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	239.911863982044	248	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGGATCTGAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	104314940	104278662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
tx.5733	chr13	-	3501	12	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	249.125412341616	153	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAGGATCTGAGTCAA	NA	False	NA	NA	False	NA	NA	NA	104314940	104278663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
tx.5734	chr13	-	3491	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAGGATCTGAGTCAA	NA	False	NA	NA	False	NA	NA	NA	104314940	104278663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
tx.5735	chr13	-	1599	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	7	3	7	-3	multi-exon	FALSE	canonical	3	68	junction_1	0	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTCTGATTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	104314940	104310232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_104311513_104314621
tx.5736	chr13	+	3808	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	11	-403	11	48	multi-exon	FALSE	canonical	3	141	junction_1	34.1	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGCTAGTTAACAATTT	NA	False	NA	NA	False	NA	NA	NA	104315315	104339928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
tx.5737	chr13	+	4070	10	NIC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	9	433	combination_of_known_splicesites	FALSE	canonical	1	6	junction_9	72.9410382550756	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGATTTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	104315313	104340313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104337738
tx.5738	chr13	+	4654	9	ISM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	4775	-412	4474	57	3prime_fragment	FALSE	canonical	3	204	junction_4	17.8308020010318	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAACAATTTAAGTCATTA	NA	False	NA	NA	False	NA	NA	NA	104320079	104339937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
tx.5739	chr13	+	3965	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4470	49	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	55.184538897533	37	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGCTAGTTAACAATTTA	NA	False	NA	NA	False	NA	NA	NA	104320075	104339929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
tx.574	chr1	-	2185	2	FSM	ENSMUSG00000034486.9	ENSMUST00000036954.9	2135	2	-51	1	-51	-1	multi-exon	FALSE	canonical	3	46	junction_1	0	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAGCTTAATCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	89858952	89855678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_89856866_89857954
tx.5740	chr13	+	3594	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4474	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.9177977950463	32	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTTATTCTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	104320079	104339885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_104320173_104320495_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
tx.5741	chr13	-	2347	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	-2	-3	-2	3	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	358	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACGTGTCAAATGACTGG	NA	False	NA	NA	False	NA	NA	NA	104365332	104341628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
tx.5742	chr13	+	1002	10	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	409	junction_5	30.3205101100449	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCATAGTTTGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	104365454	104386123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
tx.5743	chr13	-	1873	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	13	185	13	-185	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	523	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGCAGATTGCATTAG	NA	False	NA	NA	False	NA	NA	NA	104953448	104767832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
tx.5744	chr13	+	2329	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	33	3	-29	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATAAAAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	104953717	104975779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
tx.5745	chr13	+	3966	4	ISM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	8084	3	-1397	0	3prime_fragment	FALSE	canonical	3	138	junction_3	18.8325958557674	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATAAAAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	104961768	104975779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_104963611_104969361_104969506_104970755_104970829_104973872
tx.5746	chr13	-	4299	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	25	1	12	-1	multi-exon	FALSE	canonical	0	0	junction_13	115.519794104579	933	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	107073441	106930947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
tx.5747	chr13	+	1988	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-32	95	0	-95	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	257	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACTAAACTAGCTTCTC	NA	False	NA	NA	False	NA	NA	NA	107083634	107096173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
tx.5748	chr13	+	2163	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-6	-1	intron_retention	TRUE	canonical	3	551	junction_5	39.2372272210971	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCGCCTACAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	107083628	107096267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
tx.5749	chr13	+	1237	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-11	-840	intron_retention	FALSE	canonical	1	7	junction_8	195.187089737001	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	NA	False	NA	NA	NA	107083651	107095428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107093601_107093709_107095162
tx.575	chr1	+	2069	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	-17	-680	-17	680	multi-exon	FALSE	canonical	3	31	junction_1	0	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCGACCCGATTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	89857938	89860264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_89858176_89858432
tx.5750	chr13	-	3925	7	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	19969	-3123	331	-4	3prime_fragment	FALSE	canonical	3	95	junction_4	19.5419776094665	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTATGTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	107113295	107095507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163
tx.5751	chr13	-	3986	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	-273	1591	-265	673	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAGAAATAATGTACTT	NA	False	NA	NA	False	NA	NA	NA	107158899	107097094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
tx.5752	chr13	-	3929	20	NIC	ENSMUSG00000021693.21	novel	5304	20	NA	NA	-265	673	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	27.307624781206	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAGAAATAATGTACTT	NA	False	NA	NA	False	NA	NA	NA	107158899	107097094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
tx.5753	chr13	-	3061	14	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	11653	-1538	-7985	675	3prime_fragment	FALSE	canonical	3	85	junction_12	19.440700306377	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAATAATGTACTTCA	NA	False	NA	NA	False	NA	NA	NA	107121611	107097092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571
tx.5754	chr13	+	1926	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	97	junction_1	47	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	108180971	108185706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_108181021_108182958_108183103_108183973
tx.5755	chr13	+	2107	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	-9	-1	-6	1	multi-exon	FALSE	canonical	3	27	junction_1	82	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGAGTTTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	108181013	108185707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_108181243_108182958_108183103_108183973
tx.5756	chr13	+	1878	2	FSM	ENSMUSG00000071180.6	ENSMUST00000224361.2	830	2	13	-1061	13	0	multi-exon	FALSE	canonical	3	191	junction_1	0	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	108182957	108185706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_108183103_108183973
tx.5757	chr13	-	655	4	FSM	ENSMUSG00000068184.8	ENSMUST00000163558.3	678	4	21	2	-11	-2	multi-exon	FALSE	canonical	3	548	junction_2	39.4151691047439	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCTTCGTATTTCCTGA	NA	False	NA	NA	False	NA	NA	NA	108295136	108189124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_108189489_108217886_108217928_108228067_108228158_108294976
tx.5758	chr13	+	2127	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	6	262	-1	117	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAGACAATTTAGGAGA	NA	False	NA	NA	False	NA	NA	NA	108295270	108331636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
tx.5759	chr13	+	1643	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	2	466	2	-458	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCCTTGAGCGCATT	NA	False	NA	NA	False	NA	NA	NA	108295273	108331053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
tx.576	chr1	-	2064	12	FSM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-2	-2	-2	-1	multi-exon	FALSE	canonical	3	59	junction_8	12	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTAATTTGGTCACTG	NA	False	NA	NA	False	NA	NA	NA	90017868	89969854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
tx.5760	chr13	+	4021	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-8	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTCATGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	108350929	108422217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
tx.5761	chr13	+	3977	8	FSM	ENSMUSG00000021696.10	ENSMUST00000225550.2	2351	8	-13	-1613	-7	3	multi-exon	FALSE	canonical	3	9	junction_3	34.299997025049	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCATGTCTAACTGAA	NA	False	NA	NA	False	NA	NA	NA	108350930	108422220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_108351035_108393200_108393333_108403723_108403869_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
tx.5762	chr13	+	7037	5	NIC	ENSMUSG00000021696.10	novel	4013	8	NA	NA	52779	0	intron_retention	FALSE	canonical	3	99	junction_3	5.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTCATGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	108403722	108422217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
tx.5763	chr13	+	2527	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	16	20	16	-20	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATACTA	2863	False	NA	NA	False	NA	NA	NA	108452881	108526099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
tx.5764	chr13	+	5677	15	FSM	ENSMUSG00000021699.18	ENSMUST00000135275.8	2123	15	-218	-3336	-218	1239	multi-exon	TRUE	canonical	1	3	junction_1	7.84544583871199	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCTTGTACATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	109769095	110091234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
tx.5765	chr13	+	6798	15	FSM	ENSMUSG00000021699.18	ENSMUST00000074103.12	2167	15	-647	-3984	-647	1997	multi-exon	FALSE	canonical	2	10	junction_1	6.47640931002824	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATTGTTTTTGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	109822042	110091992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_109822755_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
tx.5766	chr13	+	3463	11	FSM	ENSMUSG00000021699.18	ENSMUST00000119672.8	2051	11	-497	-915	-497	828	multi-exon	FALSE	canonical	3	11	junction_1	6.78896162899747	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCTCCTCCTTTACTT	NA	False	NA	NA	False	NA	NA	NA	110039138	110088836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_110040025_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
tx.5767	chr13	+	5753	10	FSM	ENSMUSG00000021699.18	ENSMUST00000120664.8	4207	10	-310	-1236	-306	1236	multi-exon	FALSE	canonical	3	22	junction_7	3.99382239013587	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTCCTTGTACATTTT	NA	False	NA	NA	False	NA	NA	NA	110039329	110091231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
tx.5768	chr13	-	3332	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	158	-1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_10	340.73585901668	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTGTTCTTTGTAGT	NA	False	NA	NA	False	NA	NA	NA	111626404	111562214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
tx.5769	chr13	-	3389	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	158	-248	158	-4	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	672	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	111626404	111562217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
tx.577	chr1	-	2747	11	NNC	ENSMUSG00000026301.17	novel	3210	19	NA	NA	-4	-3378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.3724259778209	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCAACTGTCCGCTCAT	NA	False	NA	NA	False	NA	NA	NA	90017870	89973725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_89974541_89974795_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
tx.5770	chr13	-	3446	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	245	3	162	-3	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	1296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATTGTTGTTCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	111626400	111562216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
tx.5771	chr13	-	690	2	FSM	ENSMUSG00000085634.3	ENSMUST00000132880.3	663	2	-27	0	-27	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTTTTTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	111686472	111658883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_111659245_111686143
tx.5772	chr13	+	942	2	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	244	False	NA	NA	False	NA	NA	NA	111686568	111688685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_111686713_111687887
tx.5773	chr13	+	5222	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	56	1	-14	-1	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGGTCGTGTGACTA	NA	False	NA	NA	False	NA	NA	NA	111822767	111855129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
tx.5774	chr13	+	5103	12	ISM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	1648	1	327	-1	3prime_fragment	FALSE	canonical	3	97	junction_8	10.436743737139	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGGTCGTGTGACTA	NA	False	NA	NA	False	NA	NA	NA	111824359	111855129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
tx.5775	chr13	-	5215	11	ISM	ENSMUSG00000021754.18	ENSMUST00000109267.9	6978	20	48823	5	-5466	-5	3prime_fragment	TRUE	canonical	3	32	junction_8	10.463746938836	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGGTATTTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	111896704	111882966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485
tx.5776	chr13	-	6971	20	FSM	ENSMUSG00000021754.18	ENSMUST00000109267.9	6978	20	2	5	2	-5	multi-exon	TRUE	canonical	3	32	junction_8	9.29659038560826	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGGTATTTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	111945525	111882966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111945036
tx.5777	chr13	+	5410	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	31	3237	-11	-11	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	599	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCGTGTGTAAAAATG	NA	False	NA	NA	False	NA	NA	NA	112600634	112643383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
tx.5778	chr13	+	8023	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	-10	-751	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	120.181840310774	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAAAGAAGCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	112600635	112645869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_112600785_112607087_112607216_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
tx.5779	chr13	-	2893	22	NNC	ENSMUSG00000021758.15	novel	3012	22	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.8457652522171	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCAACAGCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	112788873	112734866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761372_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
tx.578	chr1	+	2018	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	20	1027	-6	-1027	multi-exon	FALSE	canonical	3	47	junction_1	0	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATGTGTGCTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	90131721	90143446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_90131810_90141516
tx.5780	chr13	-	2897	22	FSM	ENSMUSG00000021758.15	ENSMUST00000099166.10	3012	22	117	-2	-57	0	multi-exon	FALSE	canonical	3	36	junction_3	9.06389513461723	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCAACAGCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	112788892	112734866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
tx.5781	chr13	-	2942	22	NNC	ENSMUSG00000021758.15	novel	3012	22	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_19	12.5835079052629	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCAACAGCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	112788922	112734866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777777_112781042_112781101_112787865_112787953_112788809
tx.5782	chr13	+	5223	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	-5	3692	-5	-3686	multi-exon	FALSE	canonical	3	26	junction_2	7.31122983038101	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGCAAGAGTCTACTT	NA	False	NA	NA	False	NA	NA	NA	112797294	112871591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
tx.5783	chr13	+	5248	15	NNC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	-72	-3680	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	12.5633090662404	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGTCTACTTTGACTT	NA	False	NA	NA	False	NA	NA	NA	112797212	112871597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_112797344_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
tx.5784	chr13	+	1572	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	16	10	16	-10	multi-exon	FALSE	canonical	3	199	junction_2	66.7730484551964	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGAAGCGTTTGTAG	9653	False	NA	NA	False	NA	NA	NA	112937341	113004418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
tx.5785	chr13	+	1576	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	-61	-243	10	-9	multi-exon	FALSE	canonical	3	38	junction_1	139.137342219837	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGAAGCGTTTGTAGT	9647	False	NA	NA	False	NA	NA	NA	112937335	113004419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
tx.5786	chr13	+	1417	5	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	17	-9	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	115.720298565118	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGAAGCGTTTGTAGT	9654	False	NA	NA	False	NA	NA	NA	112937342	113004419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_112937801_112993279_112993561_112996177_112996236_113003329_113003507_113003976
tx.5787	chr13	-	3327	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	8	354	8	83	multi-exon	TRUE	canonical	3	524	junction_21	59.6473487509525	1017	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7244	False	NA	NA	False	NA	NA	NA	113063924	113004305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
tx.5788	chr13	+	4461	27	FSM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	221	0	27	0	multi-exon	TRUE	canonical	3	222	junction_12	28.2580040501697	592	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	113064208	113105966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
tx.5789	chr13	+	8244	10	FSM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	23	7	23	-4	multi-exon	FALSE	canonical	3	29	junction_9	5.32870169256969	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACACATGGTCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	113429715	113507042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
tx.579	chr1	+	1483	8	NNC	ENSMUSG00000034432.12	novel	2287	8	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.130579454525	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGCTCTAGAAATTTCA	NA	False	NA	NA	False	NA	NA	NA	90531191	90540848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_90531278_90532124_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
tx.5790	chr13	+	6809	8	ISM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	25622	9	-23767	-6	3prime_fragment	FALSE	canonical	3	29	junction_7	5.89015089373951	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTACACATGGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	113455314	113507040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_+_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
tx.5791	chr13	+	665	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCAGAGCTGTCAAAACT	NA	False	NA	NA	False	NA	NA	NA	113712535	113713200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_113712500_113713200
tx.5792	chr13	-	4453	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	-10	4	-10	2	multi-exon	FALSE	canonical	3	496	junction_1	0	1238	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATCGCTTGTCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	113755110	113728718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_113731399_113753337
tx.5793	chr13	+	3786	2	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	113855139	113860380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_113858712_113860166
tx.5794	chr13	+	3929	3	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	1.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	113855140	113860378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_113858712_113858798_113858945_113860166
tx.5795	chr13	+	1560	2	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTAACTTAGTCTGA	1815	False	NA	NA	False	NA	NA	NA	113872494	113876380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_113872828_113875153
tx.5796	chr13	+	1645	3	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	12	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTAACTTAGTCTGA	1864	False	NA	NA	False	NA	NA	NA	113872543	113876380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_113872828_113872948_113873083_113875153
tx.5797	chr13	+	1795	2	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTCTGATCATTCTTG	1844	False	NA	NA	False	NA	NA	NA	113872523	113876389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr13_+_113873083_113875153
tx.5798	chr13	+	3340	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	20	4	20	-4	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTTTCCTGACTGACT	NA	False	NA	NA	False	NA	NA	NA	113931060	114293993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
tx.5799	chr13	-	667	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	178	853	0	0	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	381	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	114524616	114425183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
tx.58	chr1	-	2902	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	30	6	-5	-6	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	1037	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGATGAGTCTATTTT	9686	False	NA	NA	False	NA	NA	NA	13660104	13634927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
tx.580	chr1	+	1732	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	497	58	0	-58	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	590	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCCTCTGACCCCCTCC	NA	False	NA	NA	False	NA	NA	NA	90531199	90541005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
tx.5800	chr13	-	2495	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	64	-708	64	28	multi-exon	FALSE	canonical	3	13	junction_1	3.32264954516723	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCTCAGTTTCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	114595421	114588797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
tx.5801	chr13	-	2424	6	FSM	ENSMUSG00000021765.10	ENSMUST00000231252.2	1113	6	-234	-1077	129	25	multi-exon	FALSE	canonical	2	2	junction_2	7.29383301152419	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGGTCTCAGTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	114595356	114588800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_114590042_114590815_114591044_114591656_114591882_114592219_114592439_114592898_114593091_114595037
tx.5802	chr13	+	1186	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	13	-6	5	0	multi-exon	FALSE	canonical	3	133	junction_2	16.9844700306551	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	114954784	114965265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
tx.5803	chr13	+	1071	6	FSM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	-17	801	-2	0	multi-exon	TRUE	canonical	3	20	junction_1	59.3450924677011	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	114954777	114965265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_114954860_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
tx.5804	chr13	-	1622	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	-22	0	-22	0	multi-exon	FALSE	canonical	3	85	junction_1	0	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTAGTTCGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	115226744	115224890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_115225498_115225729
tx.5805	chr13	-	2557	6	FSM	ENSMUSG00000042258.14	ENSMUST00000036060.13	2516	6	-34	-7	-34	7	multi-exon	FALSE	canonical	1	2	junction_1	0.4	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATGATTCAGGGTCCCT	NA	False	NA	NA	False	NA	NA	NA	116446259	116434809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_116436133_116438146_116438315_116439581_116439869_116441753_116442014_116444809_116445000_116445930
tx.5806	chr13	+	2258	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	348	317	-96	-317	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	416	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCCCTTGTGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	117357155	117410634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
tx.5807	chr13	-	3311	3	ISM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1841	0	-1841	intron_retention	FALSE	canonical	3	1977	junction_1	31	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTGACTGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	118523788	118516757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_118517206_118519411_118519589_118521102
tx.5808	chr13	-	2750	4	ISM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1841	0	-1841	intron_retention	FALSE	canonical	3	1748	junction_3	125.151463790436	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTGACTGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	118523788	118516757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769
tx.5809	chr13	-	1476	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1843	0	-1843	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	1510	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTCTTGACTGAAAGA	NA	False	NA	NA	False	NA	NA	NA	118523788	118516759	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
tx.581	chr1	-	4613	2	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	NA	False	NA	NA	False	NA	NA	NA	90555482	90550812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_90551202_90551258
tx.5810	chr13	+	4181	3	FSM	ENSMUSG00000021732.15	ENSMUST00000022246.9	4114	3	-67	0	-67	0	multi-exon	FALSE	canonical	3	7	junction_2	4	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTACTGTTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	118851167	118928651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_118852248_118918041_118918146_118925654
tx.5811	chr13	-	3409	17	NNC	ENSMUSG00000116207.2	novel	3339	17	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	55.0277983727316	69	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCTTCGTCTCTGATG	NA	False	NA	NA	False	NA	NA	NA	119545583	119472063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511286_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282_119533513_119541087_119541291_119545438
tx.5812	chr13	-	3390	17	NNC	ENSMUSG00000116207.2	novel	3339	17	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	55.0277983727316	79	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCTTCGTCTCTGATG	NA	False	NA	NA	False	NA	NA	NA	119545559	119472063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511291_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282_119533513_119541087_119541291_119545438
tx.5813	chr13	+	2512	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-173	-814	-173	-13	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTTTAAAATGGTATC	NA	False	NA	NA	False	NA	NA	NA	119564963	119594741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
tx.5814	chr13	+	2758	11	NIC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	128.383838546758	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	119565169	119594754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584296_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
tx.5815	chr13	+	2914	11	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	-7	-34	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	104.451376247515	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTTAGTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	119565450	119594720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
tx.5816	chr13	+	2544	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	-22	29	-22	-29	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTTGTTTCTTCTAAC	NA	False	NA	NA	False	NA	NA	NA	119565435	119594725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
tx.5817	chr13	+	2798	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	-235	-832	-24	-29	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTTGTTTCTTCTAAC	NA	False	NA	NA	False	NA	NA	NA	119565433	119594725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
tx.5818	chr13	+	3945	3	NIC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	-1	6	intron_retention	FALSE	canonical	3	115	junction_1	7.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTTGAAATCTAAAAACG	NA	False	NA	NA	False	NA	NA	NA	119599302	119606367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_119602841_119603402_119603493_119606050
tx.5819	chr13	+	2556	13	FSM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	9	0	1	0	multi-exon	FALSE	canonical	3	76	junction_1	23.5189049253763	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	NA	False	NA	NA	NA	119599312	119622653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
tx.582	chr1	-	2615	3	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	90555500	90550811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_90551202_90551258_90551662_90553678
tx.5820	chr13	+	2494	13	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	42	junction_1	29.2546292633035	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	NA	False	NA	NA	NA	119599311	119622653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
tx.5821	chr13	+	3348	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	-62	178	23	0	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	363	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	120151937	120169618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
tx.5822	chr13	+	3285	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	-40	0	27	0	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	778	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	120151941	120169618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
tx.5823	chr13	-	3171	8	FSM	ENSMUSG00000094870.9	ENSMUST00000223813.2	2561	8	-6	-604	0	0	multi-exon	FALSE	canonical	3	47	junction_7	43.7488192260485	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATGTGTATGGGTGT	NA	False	NA	NA	False	NA	NA	NA	120252274	120226723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
tx.5824	chr13	-	2917	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	-29	78	-29	-77	multi-exon	FALSE	canonical	3	32	junction_7	48.3110668861025	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	120252371	120226800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
tx.5825	chr13	-	3531	6	ISM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	26	1	26	0	intron_retention	FALSE	canonical	3	148	junction_5	14.0199857346575	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATGTGTATGGGTGT	NA	False	NA	NA	False	NA	NA	NA	120252315	120226723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684
tx.5826	chr13	-	3429	7	ISM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	27	1	26	0	intron_retention	FALSE	canonical	3	107	junction_3	24.5453095768259	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATGTGTATGGGTGT	NA	False	NA	NA	False	NA	NA	NA	120252315	120226723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684
tx.5827	chr14	+	358	3	ISM	ENSMUSG00000058317.13	ENSMUST00000176062.3	647	5	-14	233039	11	14873	5prime_fragment	FALSE	canonical	3	139	junction_1	13	107	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTTCGGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	3575988	3598202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_3576112_3581246_3581431_3598151
tx.5828	chr14	+	693	3	ISM	ENSMUSG00000058317.13	ENSMUST00000151926.8	666	5	-271	284606	8	14873	5prime_fragment	FALSE	canonical	3	30	junction_1	67.5	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTTCGGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	3576010	3598202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_3576469_3581246_3581431_3598151
tx.5829	chr14	+	1098	3	ISM	ENSMUSG00000058317.13	ENSMUST00000175643.8	757	6	257864	-464	-33192	0	3prime_fragment	FALSE	canonical	3	197	junction_2	14	159	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCTGTACCAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	3839262	3896119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_3839398_3882697_3882846_3895304
tx.583	chr1	+	3527	8	NIC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	28.1163762288972	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	90926463	91045037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
tx.5830	chr14	+	1393	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	10	5	10	-5	multi-exon	FALSE	canonical	3	247	junction_1	27.2073519475895	162	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGACCCTGCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	4137846	4186969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
tx.5831	chr14	-	4434	4	NNC	ENSMUSG00000021772.16	novel	4598	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	45.0653845971483	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTAGTCCCAATAAGATT	NA	False	NA	NA	False	NA	NA	NA	4198562	4185692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_4189750_4191150_4191227_4192889_4193001_4198372
tx.5832	chr14	-	4489	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	41	68	-9	-68	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGAATGCCTAGTTAA	NA	False	NA	NA	False	NA	NA	NA	4198519	4185760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
tx.5833	chr14	+	1856	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	54	12	16	-12	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	1358	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAAGTGGACCTATGTT	NA	False	NA	NA	False	NA	NA	NA	4198682	4201861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
tx.5834	chr14	+	827	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	56	0	-3	0	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	407	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	4198722	4200736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
tx.5835	chr14	+	804	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	877	junction_1	6301.70655898508	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	4198723	4200736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
tx.5836	chr14	+	4650	8	FSM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	10	3	10	-3	multi-exon	FALSE	canonical	3	94	junction_5	14.9229312653721	211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATTGTTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	4230578	4265639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
tx.5837	chr14	-	5661	36	FSM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	-1	4675	-1	1959	multi-exon	TRUE	canonical	3	144	junction_31	34.1687767724051	348	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAGACTCTTTACTGAA	3842	False	NA	NA	False	NA	NA	NA	6104585	6038975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
tx.5838	chr14	-	2742	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	13	180	13	-180	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTCTTGTATGAGAAG	NA	False	NA	NA	False	NA	NA	NA	6220470	6158016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
tx.5839	chr14	-	3038	4	ISM	ENSMUSG00000021785.9	ENSMUST00000153109.2	3296	5	-2	10312	-2	2002	5prime_fragment	FALSE	canonical	3	70	junction_2	8.52447456836295	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCCTTGGTCCCACCGT	NA	False	NA	NA	False	NA	NA	NA	6220438	6196775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_6199289_6208962_6209200_6215006_6215122_6220265
tx.584	chr1	+	2091	13	FSM	ENSMUSG00000026305.16	ENSMUST00000068116.13	2050	13	-35	-6	7	2	multi-exon	FALSE	canonical	3	14	junction_1	28.0697296428416	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTTTTGTTTTTTACT	NA	False	NA	NA	False	NA	NA	NA	90926465	91056668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
tx.5840	chr14	+	3479	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	-10	-35	-10	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATCAGCTGATTCTG	NA	False	NA	NA	False	NA	NA	NA	6226421	6231111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_6226474_6226964_6227973_6228692
tx.5841	chr14	-	7378	25	FSM	ENSMUSG00000021733.12	ENSMUST00000057015.8	8132	25	757	-3	11	3	multi-exon	TRUE	canonical	3	66	junction_19	12.4782449576141	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTGTTGTTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	7766727	7669819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
tx.5842	chr14	-	5623	13	ISM	ENSMUSG00000021733.12	ENSMUST00000224952.3	7297	26	46793	-2	1810	2	3prime_fragment	FALSE	canonical	3	81	junction_1	9.67348897186992	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCTGTTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	7704186	7669820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052
tx.5843	chr14	-	7338	25	FSM	ENSMUSG00000021733.12	ENSMUST00000225630.3	3663	25	-43	-3632	11	2	multi-exon	FALSE	canonical	0	0	junction_19	22.1114208172057	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCTGTTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	7766727	7669820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729888_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
tx.5844	chr14	-	1973	11	FSM	ENSMUSG00000068758.9	ENSMUST00000224163.2	2315	11	-176	518	-2	0	multi-exon	FALSE	canonical	3	7	junction_10	8.68849814409832	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	NA	False	NA	NA	NA	8123347	8114269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574
tx.5845	chr14	+	1881	7	NIC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	-9	-10	intron_retention	FALSE	canonical	3	1215	junction_2	21.7025344142107	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTAATTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	8348820	8357579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
tx.5846	chr14	+	1338	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	42	7	-9	-7	multi-exon	FALSE	canonical	3	1151	junction_1	36.7689975886408	486	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATTTTTTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	8348820	8357582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
tx.5847	chr14	-	6961	11	ISM	ENSMUSG00000021738.6	ENSMUST00000022257.4	6853	12	210	4	210	-4	intron_retention	FALSE	canonical	3	12	junction_7	5.07937003968012	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACGGCTGGCTGCATG	NA	False	NA	NA	False	NA	NA	NA	8457062	8362464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393
tx.5848	chr14	-	6666	12	FSM	ENSMUSG00000021738.6	ENSMUST00000022257.4	6853	12	187	0	187	0	multi-exon	FALSE	canonical	3	10	junction_11	5.78399044384977	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTGGCTGCATGCGTT	NA	False	NA	NA	False	NA	NA	NA	8457085	8362460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393_8456691_8457012
tx.5849	chr14	+	1175	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-240	2	-240	0	multi-exon	TRUE	canonical	3	370	junction_1	118.776758531907	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	8508245	8520749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.585	chr1	+	2133	12	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	27.2156979494562	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	90981179	91056666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
tx.5850	chr14	+	1045	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	278.184712691046	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	NA	False	NA	NA	NA	8508522	8520751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_8508579_8512131_8512304_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.5851	chr14	+	1067	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	272.312292001298	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	8508525	8520749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_8508579_8512131_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.5852	chr14	+	1880	7	FSM	ENSMUSG00000053453.10	ENSMUST00000223832.2	1918	7	40	-2	-5	0	multi-exon	FALSE	canonical	3	370	junction_1	120.431169830184	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	NA	False	NA	NA	NA	8508542	8520751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_8508579_8515106_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.5853	chr14	+	1077	8	NIC	ENSMUSG00000053453.10	novel	707	6	NA	NA	58	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	230.414976128918	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	8508660	8520749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_8508896_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.5854	chr14	-	2357	5	FSM	ENSMUSG00000033111.17	ENSMUST00000225294.2	1191	5	-9	-1157	1	13	multi-exon	FALSE	canonical	3	25	junction_4	54.4196655631032	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTGTTTTCTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	10185514	10166626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185429
tx.5855	chr14	-	2308	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	49	95	0	13	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTGTTTTCTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	10185541	10166626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
tx.5856	chr14	-	4831	28	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_16	18.893318289663	30	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGGACAGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	10517058	10231198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10290412_10290500_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040_10507190_10516877
tx.5857	chr14	-	4744	27	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_26	12.5460099977605	67	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGGACAGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	10517058	10231198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040_10507190_10516877
tx.5858	chr14	-	931	2	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	56	junction_1	0	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTGTGTTGGTTAG	NA	False	NA	NA	False	NA	NA	NA	10916263	10748550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_10748659_10915440
tx.5859	chr14	+	2870	14	ISM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-48	41396	-48	29833	5prime_fragment	FALSE	canonical	3	123	junction_12	20.0638035531091	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTTAACATAATTTT	NA	False	NA	NA	False	NA	NA	NA	13803484	13997185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360
tx.586	chr1	+	3716	9	NIC	ENSMUSG00000026305.16	novel	3645	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_5	16.4088390814219	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	90981176	91045037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
tx.5860	chr14	+	4424	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-48	5857	-47	-5857	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCAGTGATGTATTGTC	NA	False	NA	NA	False	NA	NA	NA	13803485	13961495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
tx.5861	chr14	+	2713	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-31	-1	-31	1	multi-exon	FALSE	canonical	3	111	junction_15	21.4813614300605	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGCTTCCTTTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	13803501	14038582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
tx.5862	chr14	+	2469	13	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-47	-7865	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_12	58.1078379681548	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAAAAGTTTGCTTATA	NA	False	NA	NA	False	NA	NA	NA	13803485	13959487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13957406_13957460_13958579
tx.5863	chr14	+	4268	5	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-31	-119290	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	70.9977992616673	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTCTGCACCTTCT	NA	False	NA	NA	False	NA	NA	NA	13803501	13848062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13844345
tx.5864	chr14	-	1649	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	3	-2	3	2	multi-exon	FALSE	canonical	3	225	junction_1	7.5	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGTTGTATTTATTGC	NA	False	NA	NA	False	NA	NA	NA	14255630	14246207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_14247587_14249552_14249623_14255430
tx.5865	chr14	-	7531	2	ISM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	-73	0	-73	0	intron_retention	FALSE	canonical	3	225	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGGTTGTATTTATT	NA	False	NA	NA	False	NA	NA	NA	14255706	14246209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_14247587_14249552
tx.5866	chr14	-	3417	3	NNC	ENSMUSG00000021752.15	novel	3052	3	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	103.5	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGTATTTATTGCTA	NA	False	NA	NA	False	NA	NA	NA	14255630	14246205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_14247587_14249552_14249623_14253664
tx.5867	chr14	+	1452	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	61	0	-2	0	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	1487	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	NA	NA	NA	14296808	14303777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
tx.5868	chr14	-	2820	18	FSM	ENSMUSG00000033885.16	ENSMUST00000036682.9	2812	18	-10	2	-10	-2	multi-exon	TRUE	canonical	3	68	junction_2	18.5091392369855	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTAGCTTTGCTAGG	NA	False	NA	NA	False	NA	NA	NA	14371572	14304657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
tx.5869	chr14	-	2830	18	FSM	ENSMUSG00000033885.16	ENSMUST00000225653.2	2765	18	-61	-4	-17	-2	multi-exon	FALSE	canonical	3	52	junction_2	21.2781870861862	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTAGCTTTGCTAGG	NA	False	NA	NA	False	NA	NA	NA	14371579	14304657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
tx.587	chr1	+	3644	8	FSM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	1	0	1	0	multi-exon	FALSE	canonical	3	45	junction_4	18.7823190848223	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	90981176	91045037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
tx.5870	chr14	-	2431	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-28	-2	-28	2	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTATATACCTTTA	NA	False	NA	NA	False	NA	NA	NA	14389434	14377936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
tx.5871	chr14	-	2232	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	2	-8	2	8	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCCAGGTACTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	14466869	14413001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
tx.5872	chr14	-	9036	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	3	255	junction_40	115.220754303303	208	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTCCCTGTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	14651788	14518187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
tx.5873	chr14	-	2709	3	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	126833	3	60049	-3	3prime_fragment	FALSE	canonical	3	634	junction_2	5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTCCCTGTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	14524983	14518187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_14519469_14521125_14521330_14523759
tx.5874	chr14	-	9063	46	FSM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	34	3	34	-3	multi-exon	TRUE	canonical	3	76	junction_16	125.273027256567	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTCCCTGTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	14651782	14518187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
tx.5875	chr14	+	2040	6	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90239	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1170932428798	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGTGTATGCTTCTG	6829	False	NA	NA	False	NA	NA	NA	14810967	14924620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_14811253_14917011_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
tx.5876	chr14	+	3307	5	FSM	ENSMUSG00000094021.8	ENSMUST00000169215.8	984	5	-2309	-14	-2309	14	multi-exon	FALSE	canonical	0	0	junction_3	8	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	NA	NA	NA	15422493	15433252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_15424996_15425726_15425890_15426844_15426977_15427652_15427837_15432926
tx.5877	chr14	+	1647	4	NNC	ENSMUSG00000090691.4	novel	2053	7	NA	NA	-187	-9033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.0855260988773	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACAGAATGTATTGTTC	NA	False	NA	NA	False	NA	NA	NA	15579623	15592238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_15579954_15581334_15581449_15584666_15584818_15591186
tx.5878	chr14	+	2138	8	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14667	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.16292440618547	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCAGTGTATGCTTCA	NA	False	NA	NA	False	NA	NA	NA	16042623	16063943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16057290_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
tx.5879	chr14	-	2094	8	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-4	1057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.6961751699056	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	NA	NA	NA	17614201	17592864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17612629_17612744_17614118
tx.588	chr1	+	2208	13	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	25.9117090649511	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	90981176	91056666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
tx.5880	chr14	-	5239	8	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	-91691	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.0995626366713	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	NA	NA	NA	18450938	18336988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344607_18344766_18348010_18354336_18354488_18450852
tx.5881	chr14	-	3072	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	152	53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTCTGTGGGGGTCCT	NA	False	NA	NA	False	NA	NA	NA	19136994	19114920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19132241_19132393_19135569_19135684_19135996
tx.5882	chr14	-	1759	5	NIC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-55	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.6393596310755	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGTGTATGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	19137201	19114975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19137061
tx.5883	chr14	-	2155	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	NA	NA	NA	19137195	19114973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19132241_19132393_19135569_19135684_19137061
tx.5884	chr14	+	4888	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	-12	0	-12	0	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	2044	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	NA	False	NA	NA	NA	19801320	19861855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
tx.5885	chr14	-	996	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	0	566	0	-566	multi-exon	FALSE	canonical	3	1848	junction_5	420.22365279378	564	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	NA	False	NA	NA	NA	19873892	19861984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
tx.5886	chr14	-	3627	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	199	0	9	0	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACGGGGTCACTTTC	NA	False	NA	NA	False	NA	NA	NA	20027118	19922626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
tx.5887	chr14	-	790	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	38	1487	38	337	multi-exon	FALSE	canonical	3	53	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGGTTTGTCTCATTA	5343	False	NA	NA	False	NA	NA	NA	20133213	20127190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20127713_20132945
tx.5888	chr14	-	3367	5	FSM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	24	1	24	-1	multi-exon	FALSE	canonical	3	94	junction_3	12.5573683548744	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTGTGGTATGTTT	NA	False	NA	NA	False	NA	NA	NA	20231853	20190125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
tx.5889	chr14	+	1709	2	FSM	ENSMUSG00000021809.11	ENSMUST00000225728.2	375	2	-773	-561	166	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTGTGAAGGTATATTTT	NA	False	NA	NA	False	NA	NA	NA	20360723	20366830	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20361694_20366091
tx.589	chr1	+	4056	9	NIC	ENSMUSG00000026305.16	novel	3645	8	NA	NA	-308	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	35.0033480541505	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	90980857	91045037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91038076_91038170_91039877_91040020_91042317
tx.5890	chr14	-	2694	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	37	401	-14	-401	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	737	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCAGTCTGTGACATT	NA	False	NA	NA	False	NA	NA	NA	20398152	20370320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
tx.5891	chr14	+	2704	6	FSM	ENSMUSG00000039599.17	ENSMUST00000224930.2	2716	6	10	2	10	-2	multi-exon	FALSE	canonical	3	59	junction_5	79.7004391455907	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACCAGTTAAATGTTC	NA	False	NA	NA	False	NA	NA	NA	20398239	20415310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330
tx.5892	chr14	+	1627	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	-9	496	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	78.3207436691512	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	20398242	20418631	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20417913
tx.5893	chr14	+	1786	8	FSM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-81	2778	-5	497	multi-exon	FALSE	canonical	3	134	junction_7	47.5106862308097	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAATATGTTCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	20398246	20418632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
tx.5894	chr14	+	2868	7	ISM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-88	6098	10	0	5prime_fragment	FALSE	canonical	3	175	junction_5	36.4771618047969	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCAGTTAAATGTTCTC	NA	False	NA	NA	False	NA	NA	NA	20398239	20415312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330
tx.5895	chr14	-	1379	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	31	221	-3	-221	multi-exon	TRUE	canonical	3	896	junction_2	62.1711347813437	588	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGTGGATTATTTAAAT	NA	False	NA	NA	False	NA	NA	NA	20438947	20434926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
tx.5896	chr14	-	629	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	24	1919	24	4	multi-exon	FALSE	canonical	3	1591	junction_2	40	338	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTCCTCTGGCATAGCCTG	8551	False	NA	NA	False	NA	NA	NA	20443678	20441290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20441529_20441960_20442222_20443548
tx.5897	chr14	-	1849	2	ISM	ENSMUSG00000049960.5	ENSMUST00000224286.2	801	3	-20	-4	-20	4	intron_retention	TRUE	canonical	3	1671	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTCCTCTGGCATAGCCTG	8658	False	NA	NA	False	NA	NA	NA	20443571	20441290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_20441529_20441960
tx.5898	chr14	-	1707	12	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	6579	891	-1869	361	3prime_fragment	FALSE	canonical	3	720	junction_8	88.8280910076656	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8456	False	NA	NA	False	NA	NA	NA	20523400	20506235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342
tx.5899	chr14	-	1821	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	15	891	12	361	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8215	False	NA	NA	False	NA	NA	NA	20529964	20506235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
tx.59	chr1	-	2936	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	26	1532	26	-1532	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	1097	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	13730744	13695085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
tx.590	chr1	+	3898	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-46	-1	-32	1	multi-exon	TRUE	canonical	3	84	junction_2	27.1317771871533	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4218	False	NA	NA	False	NA	NA	NA	91072778	91098518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
tx.5900	chr14	-	1761	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	182	908	-10	361	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	768	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8160	False	NA	NA	False	NA	NA	NA	20530019	20506235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
tx.5901	chr14	-	3775	13	FSM	ENSMUSG00000021816.12	ENSMUST00000022355.11	3074	13	-39	-662	-4	-4	multi-exon	FALSE	canonical	3	28	junction_1	56.1047507396259	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTAGCTGTCTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	20596619	20549435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20551731_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
tx.5902	chr14	-	3502	14	FSM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-15	-189	11	189	multi-exon	FALSE	canonical	3	82	junction_1	49.8631262652749	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGGTTAGAAGAGATGT	NA	False	NA	NA	False	NA	NA	NA	20596630	20549746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
tx.5903	chr14	-	3503	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	11	317	11	187	multi-exon	FALSE	canonical	3	82	junction_1	50.211858850582	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGGGTTAGAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	20596630	20549748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
tx.5904	chr14	-	2446	12	FSM	ENSMUSG00000021816.12	ENSMUST00000161989.2	2322	12	-124	0	9	0	multi-exon	FALSE	canonical	3	102	junction_2	32.8535442821749	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTAATCTGGCTCGTT	NA	False	NA	NA	False	NA	NA	NA	20596632	20557738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
tx.5905	chr14	-	2443	12	ISM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-17	7803	9	0	5prime_fragment	FALSE	canonical	3	105	junction_2	32.0745515869534	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTAATCTGGCTCGTT	NA	False	NA	NA	False	NA	NA	NA	20596632	20557738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
tx.5906	chr14	-	6477	21	FSM	ENSMUSG00000034235.18	ENSMUST00000022356.12	6580	21	103	0	103	0	multi-exon	TRUE	canonical	3	44	junction_20	12.721929885045	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	NA	False	NA	NA	False	NA	NA	NA	20691028	20598979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
tx.5907	chr14	+	4443	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	16	2	1	0	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	494	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	NA	False	NA	NA	NA	20724391	20744918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
tx.5908	chr14	+	4154	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	7	2	-2	-2	multi-exon	FALSE	canonical	3	28	junction_1	5	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGTTTCTTTATTACA	NA	False	NA	NA	False	NA	NA	NA	20745042	20751082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20745767_20745855_20746482_20748278
tx.5909	chr14	+	4244	2	FSM	ENSMUSG00000039357.3	ENSMUST00000225804.2	3422	2	-1	-821	-1	0	multi-exon	FALSE	canonical	3	38	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCTTTATTACATT	NA	False	NA	NA	False	NA	NA	NA	20745043	20751084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20746482_20748278
tx.591	chr1	+	3799	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	30.8108945746435	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4226	False	NA	NA	False	NA	NA	NA	91072786	91098518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
tx.5910	chr14	+	569	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	47	0	-5	0	multi-exon	FALSE	canonical	3	1953	junction_1	51.5	238	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	20753120	20754493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20753266_20753357_20753477_20754188
tx.5911	chr14	+	6060	26	FSM	ENSMUSG00000021819.12	ENSMUST00000022358.9	6073	26	12	1	12	0	multi-exon	TRUE	canonical	3	22	junction_9	13.1390106172421	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGGGTCTTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	20757631	20773686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
tx.5912	chr14	-	3688	15	FSM	ENSMUSG00000039308.7	ENSMUST00000223679.2	3907	15	219	0	219	0	multi-exon	FALSE	canonical	3	47	junction_10	9.23281636117516	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9642	False	NA	NA	False	NA	NA	NA	20784411	20773797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
tx.5913	chr14	-	3637	20	FSM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	-25	-8	-1	0	multi-exon	FALSE	canonical	2	6	junction_6	9.18507762457831	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	NA	False	NA	NA	NA	20844123	20784942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
tx.5914	chr14	-	3590	19	FSM	ENSMUSG00000021820.19	ENSMUST00000100837.11	3564	19	-26	0	11	0	multi-exon	FALSE	canonical	3	16	junction_6	6.2610396328366	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	NA	False	NA	NA	NA	20844145	20784942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
tx.5915	chr14	+	5270	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	-6	3	-6	-3	multi-exon	TRUE	canonical	3	265	junction_11	15.7968351260624	568	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTCTAATTGAGGTTA	NA	False	NA	NA	False	NA	NA	NA	20979459	21083741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
tx.5916	chr14	-	3090	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	17	1204	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTTTAAAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	21102559	21084877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
tx.5917	chr14	-	2683	7	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	8	1207	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	106.531163932855	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	NA	False	NA	NA	NA	21102282	21084874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102207
tx.5918	chr14	-	3134	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	233	3365	5	1207	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	382	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	NA	False	NA	NA	NA	21102285	21084874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
tx.5919	chr14	-	3334	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	10	1203	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	101.806188417011	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGATTTTTAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	21102245	21084878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21101963
tx.592	chr1	+	3631	14	ISM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	7127	-3	7127	3	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6385039240472	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGTGCTTTCTGTAGT	6249	False	NA	NA	False	NA	NA	NA	91079951	91098520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
tx.5920	chr14	+	2157	8	NIC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	-9	1195	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	129.691313258421	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGATACTAAAATACCAA	NA	False	NA	NA	False	NA	NA	NA	21102669	21378056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21376659
tx.5921	chr14	+	1768	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	13	1	13	-1	multi-exon	FALSE	canonical	3	304	junction_9	34.7499640287584	290	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTCTGTCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	21102654	21498636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
tx.5922	chr14	+	324	2	FSM	ENSMUSG00000039197.11	ENSMUST00000223558.2	289	2	-30	-5	7	5	multi-exon	FALSE	canonical	3	60	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATCCATTTTAACAGT	NA	False	NA	NA	False	NA	NA	NA	21102648	21103993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_21102769_21103789
tx.5923	chr14	+	1822	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	1	-5	1	-2	multi-exon	FALSE	canonical	3	35	junction_1	100.003199948802	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTCTGTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	21126220	21498635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
tx.5924	chr14	+	7039	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-1	117	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	85	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGAGATTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	21531500	21722318	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
tx.5925	chr14	+	7594	10	ISM	ENSMUSG00000021767.20	ENSMUST00000182405.9	6977	17	125107	-335	-860	-10	3prime_fragment	FALSE	canonical	3	166	junction_5	13.1412083928645	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTTGACTTTGATC	NA	False	NA	NA	False	NA	NA	NA	21674959	21722536	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
tx.5926	chr14	+	5054	7	ISM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	117599	-1260	8722	0	3prime_fragment	FALSE	canonical	3	166	junction_2	12.5797456254091	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	NA	False	NA	NA	NA	21684541	21722201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
tx.5927	chr14	+	4372	3	ISM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	145315	-1260	36438	0	3prime_fragment	FALSE	canonical	3	185	junction_2	10.5	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	NA	False	NA	NA	NA	21712257	21722201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_21712535_21714524_21714817_21718398
tx.5928	chr14	+	5145	6	FSM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	22	-3593	5	-1831	multi-exon	FALSE	canonical	3	20	junction_1	7.55248303539968	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTTGGTTTTGCAATG	2636	False	NA	NA	False	NA	NA	NA	21800620	21846963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
tx.5929	chr14	+	7043	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	-10	-5420	7	-4	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGGCTTGTTATAAC	2621	False	NA	NA	False	NA	NA	NA	21800605	21848790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
tx.593	chr1	+	1852	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	7	-496	7	496	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCCTAGCATTCACAC	326	False	NA	NA	False	NA	NA	NA	91178047	91214243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
tx.5930	chr14	+	1520	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	252	182	-45	178	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	1618	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGGCTCACGTATGTGC	NA	False	NA	NA	False	NA	NA	NA	21881588	21895765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
tx.5931	chr14	-	939	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	51	1324	-32	0	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	21898994	21897246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
tx.5932	chr14	-	2494	6	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	33207	0	1606	0	3prime_fragment	TRUE	canonical	3	145	junction_4	6.05309838016862	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	NA	False	NA	NA	NA	24194650	24184020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369
tx.5933	chr14	-	4666	18	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	19370	0	-1154	0	3prime_fragment	FALSE	canonical	3	79	junction_16	26.924474658573	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	NA	False	NA	NA	NA	24208487	24184020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802
tx.5934	chr14	-	7617	32	FSM	ENSMUSG00000021782.15	ENSMUST00000090398.11	7851	32	236	-2	236	0	multi-exon	FALSE	canonical	3	63	junction_27	24.1232527147577	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	NA	False	NA	NA	NA	24295752	24184020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
tx.5935	chr14	-	2856	9	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	29453	0	428	0	3prime_fragment	FALSE	canonical	3	95	junction_6	25.2871014550897	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	NA	False	NA	NA	NA	24198404	24184020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275
tx.5936	chr14	-	4682	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	6	-1	6	1	multi-exon	FALSE	canonical	3	105	junction_23	15.9947560851118	286	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAAGTGTTTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	24537114	24498762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
tx.5937	chr14	+	2827	4	FSM	ENSMUSG00000025290.18	ENSMUST00000223939.2	2769	4	-44	-14	4	1	multi-exon	FALSE	canonical	3	9630	junction_1	1522.07774659071	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	24540752	24545927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450
tx.5938	chr14	+	558	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5247.91465131627	645	4	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	NA	False	NA	NA	NA	24540752	24545926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543567_24545834
tx.5939	chr14	+	544	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	-32	1101	5	0	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	446	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	NA	False	NA	NA	NA	24540753	24545926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
tx.594	chr1	+	1279	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	-5	4380	-5	30	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTTTGTATTCATTGT	332	False	NA	NA	False	NA	NA	NA	91178053	91213679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
tx.5940	chr14	+	7480	24	FSM	ENSMUSG00000007817.16	ENSMUST00000162645.8	7482	24	-2	4	-2	-4	multi-exon	FALSE	canonical	3	6	junction_3	25.4924281726925	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTTCTGGTGAGTTAG	319	False	NA	NA	False	NA	NA	NA	25459645	25667163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
tx.5941	chr14	+	6944	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-217	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	17.0973971017322	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTTCTGGTGAGTTAG	139	False	NA	NA	False	NA	NA	NA	25607563	25667163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
tx.5942	chr14	+	6735	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-129	-143	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	15.4092324417683	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTAGGTGTTCATGTGG	14	True	NA	NA	False	NA	NA	NA	25607651	25667024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
tx.5943	chr14	+	7218	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	-236	-10	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	16.3386234819201	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGAAGGTTCTGGTG	78	False	NA	NA	False	NA	NA	NA	25608025	25667157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
tx.5944	chr14	+	7174	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	-174	-10	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.544949486181	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGAAGGTTCTGGTG	140	False	NA	NA	False	NA	NA	NA	25608087	25667157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
tx.5945	chr14	+	4427	4	ISM	ENSMUSG00000007817.16	ENSMUST00000162645.8	7482	24	197563	3	-43	-3	3prime_fragment	FALSE	canonical	3	52	junction_3	6.94422221866655	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTCTGGTGAGTTAGC	286	False	NA	NA	False	NA	NA	NA	25657210	25667164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_25657415_25658530_25658698_25661690_25661946_25663363
tx.5946	chr14	+	1565	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	-16	0	0	0	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	451	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCTCTGGTTTTGGA	376	False	NA	NA	False	NA	NA	NA	25694577	25700892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
tx.5947	chr14	-	4575	4	FSM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	-21	2	-21	0	multi-exon	FALSE	canonical	3	42	junction_3	4.78423336480244	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCTCGTGAGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	25769484	25712067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_25715827_25720050_25720216_25757434_25757636_25769034
tx.5948	chr14	+	2445	16	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	139.082165962746	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGGTGCCAGCATGT	0	True	NA	NA	False	NA	NA	NA	25842604	25887226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_25842720_25843130_25843209_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
tx.5949	chr14	+	2374	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	16	4	-11	-4	multi-exon	TRUE	canonical	3	387	junction_6	25.4603533329122	464	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCTGGTGCCAGCAT	-9	True	NA	NA	False	NA	NA	NA	25842595	25887224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
tx.595	chr1	+	1331	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-39	-182	7	28	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTTTGTATTCATT	326	False	NA	NA	False	NA	NA	NA	91178047	91213677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
tx.5950	chr14	-	913	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	125	517	125	381	multi-exon	TRUE	canonical	3	143	junction_3	28.7170100579198	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATGCATTTCCAGTT	NA	False	NA	NA	False	NA	NA	NA	25903399	25888446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
tx.5951	chr14	-	1434	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	16	697	-13	173	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACATGCATCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	25928080	25924420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
tx.5952	chr14	-	5362	22	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	32.5658586159231	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTTGAGTTGTACAT	NA	False	NA	NA	False	NA	NA	NA	26256078	26134326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
tx.5953	chr14	-	5543	25	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	61.4828340993556	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTGAGTTGTACATC	NA	False	NA	NA	False	NA	NA	NA	26256093	26134325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
tx.5954	chr14	-	5465	24	FSM	ENSMUSG00000021870.18	ENSMUST00000102956.8	5476	24	7	4	7	1	multi-exon	FALSE	canonical	3	93	junction_11	42.4199902941944	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTTGAGTTGTACAT	NA	False	NA	NA	False	NA	NA	NA	26256079	26134326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
tx.5955	chr14	-	5542	21	NIC	ENSMUSG00000021870.18	novel	4501	23	NA	NA	16	2	intron_retention	FALSE	canonical	3	90	junction_11	33.3543100663168	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTGAGTTGTACATC	NA	False	NA	NA	False	NA	NA	NA	26256034	26134325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
tx.5956	chr14	+	4060	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	-9	2587	8	1152	multi-exon	TRUE	canonical	3	24	junction_11	139.009495679959	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGCTTGTGTTATGTGTC	NA	False	NA	NA	False	NA	NA	NA	26300723	26352890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
tx.5957	chr14	+	1706	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	42	417	42	27	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	1575	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGATTGTGTGTTCTTTTG	1728	False	NA	NA	False	NA	NA	NA	26359270	26377996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
tx.5958	chr14	-	3336	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	216	4173	216	-4173	multi-exon	FALSE	canonical	3	278	junction_2	18	500	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGAAAAGTTGATGTT	NA	False	NA	NA	False	NA	NA	NA	26390822	26385285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_26387123_26387532_26387612_26389402
tx.5959	chr14	-	6771	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-44	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	76.9144167240447	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTATGAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	26692506	26640943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
tx.596	chr1	+	1932	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	-2	-776	-2	491	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGCCTGCCTAGCATT	309	False	NA	NA	False	NA	NA	NA	91178030	91214238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
tx.5960	chr14	-	6974	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	667	1	-60	-1	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	364	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTTGTATGAAATATT	NA	False	NA	NA	False	NA	NA	NA	26692522	26640945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
tx.5961	chr14	-	6901	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	68.3302824522188	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGTATGAAATATTT	NA	False	NA	NA	False	NA	NA	NA	26692520	26640944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
tx.5962	chr14	-	6892	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	78.0284563476685	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGTATGAAATATTT	NA	False	NA	NA	False	NA	NA	NA	26692527	26640944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26684762_26684835_26685603_26685664_26686815_26686915_26692357
tx.5963	chr14	-	3185	16	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	663	19666	-64	12472	5prime_fragment	FALSE	canonical	3	283	junction_1	27.6115917686757	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	26692526	26660610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
tx.5964	chr14	+	830	4	FSM	ENSMUSG00000040726.11	ENSMUST00000035433.10	1141	4	311	0	311	0	multi-exon	FALSE	canonical	3	134	junction_1	19.2584757675391	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGTATTTTAATATACTTT	NA	False	NA	NA	False	NA	NA	NA	26722629	26724286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_26722834_26723328_26723529_26723775_26723878_26723962
tx.5965	chr14	+	1108	5	NNC	ENSMUSG00000040726.11	novel	983	5	NA	NA	262	920	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	65.6620133715073	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGCTTTCAAATTCATT	NA	False	NA	NA	False	NA	NA	NA	26722580	26725206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_26722834_26723328_26723529_26723775_26723878_26723962_26724062_26724752
tx.5966	chr14	+	8216	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	62	2	62	-2	multi-exon	FALSE	canonical	2	9	junction_1	4.46902922593064	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCAGTGGCTCCTTA	NA	False	NA	NA	False	NA	NA	NA	26760959	26829241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
tx.5967	chr14	+	3828	14	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	17.0588955433745	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	NA	NA	NA	26836808	27125868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_26836881_26837154_26837273_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
tx.5968	chr14	+	3721	13	NIC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	15.3622914957372	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	NA	NA	NA	26836797	27125868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_26836881_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
tx.5969	chr14	+	4080	13	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	13.9363633069112	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	NA	NA	NA	26836830	27125868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_26837273_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
tx.597	chr1	+	2195	12	FSM	ENSMUSG00000026307.13	ENSMUST00000027532.13	2202	12	8	-1	8	1	multi-exon	FALSE	canonical	3	51	junction_11	10.6693350656825	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAAGTGGCCTGGGCT	NA	False	NA	NA	False	NA	NA	NA	91226067	91248798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
tx.5970	chr14	+	3662	10	FSM	ENSMUSG00000021895.11	ENSMUST00000224981.2	3618	10	-44	0	-44	0	multi-exon	FALSE	canonical	3	20	junction_1	14.3716112484489	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	NA	NA	NA	27057978	27125868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_27058227_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
tx.5971	chr14	+	7523	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	4	-3	intron_retention	FALSE	canonical	3	154	junction_16	44.9305478737062	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8932	False	NA	NA	False	NA	NA	NA	27150794	27205509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
tx.5972	chr14	+	8162	23	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	-25	3	-25	-3	intron_retention	FALSE	canonical	3	108	junction_17	57.5939763838414	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8903	False	NA	NA	False	NA	NA	NA	27150765	27205509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
tx.5973	chr14	+	4610	17	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	3	14385	3	2954	5prime_fragment	FALSE	canonical	3	136	junction_16	41.1035278291292	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTGCTTTATTTAAT	8931	False	NA	NA	False	NA	NA	NA	27150793	27191127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462
tx.5974	chr14	+	7572	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	18	0	18	0	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8946	False	NA	NA	False	NA	NA	NA	27150808	27205512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
tx.5975	chr14	+	7237	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	19	0	intron_retention	FALSE	canonical	3	82	junction_22	59.3898035047312	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8947	False	NA	NA	False	NA	NA	NA	27150809	27205512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
tx.5976	chr14	+	7293	24	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	23	0	intron_retention	FALSE	canonical	3	82	junction_23	68.3154033064469	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8951	False	NA	NA	False	NA	NA	NA	27150813	27205512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
tx.5977	chr14	+	4614	7	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	42752	0	-5584	0	3prime_fragment	FALSE	canonical	3	213	junction_6	46.9411570183589	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	NA	False	NA	NA	NA	27193542	27205512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
tx.5978	chr14	-	2938	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	6	combination_of_known_splicesites	FALSE	canonical	3	25	junction_15	19.957767911267	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7513	False	NA	NA	False	NA	NA	NA	27230430	27204357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228607_27228673_27230378
tx.5979	chr14	-	2965	18	FSM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	-14	1311	-14	6	multi-exon	FALSE	canonical	3	74	junction_15	12.2471661858887	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7512	False	NA	NA	False	NA	NA	NA	27230431	27204357	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
tx.598	chr1	+	3058	8	FSM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	28	3	28	-3	multi-exon	TRUE	canonical	0	0	junction_1	0.728431359084683	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGCTCTGTCTGCTACA	NA	False	NA	NA	False	NA	NA	NA	91278765	91290135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91278858_91281327_91282175_91283173_91283310_91285055_91285143_91285476_91285633_91286509_91286699_91287057_91287204_91288730
tx.5980	chr14	+	2525	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-44	1400	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACATTCTTGTTTGTTT	2282	False	NA	NA	False	NA	NA	NA	27344340	27377159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_27344572_27374643_27375441_27375662
tx.5981	chr14	+	2563	4	NIC	ENSMUSG00000040640.12	novel	3339	8	NA	NA	-13	1402	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	17.7451088722749	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACATTCTTGTTTGTTTGT	2313	False	NA	NA	False	NA	NA	NA	27344371	27377161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_27344572_27345639_27345707_27374643_27375441_27375662
tx.5982	chr14	+	919	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	112	647	-8	175	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	259	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACATGTAAATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	29690376	29696972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
tx.5983	chr14	+	2327	14	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	-19	-1250	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	85.8768900035766	32	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTACTTACCGGATCAA	NA	False	NA	NA	False	NA	NA	NA	29700342	29716574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917_29715103_29716243
tx.5984	chr14	+	2069	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	48	2	-20	-2	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	375	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACACTGATTTGAGATA	NA	False	NA	NA	False	NA	NA	NA	29700341	29715174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
tx.5985	chr14	+	5532	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	44	0	-21	0	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	30201612	30249020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
tx.5986	chr14	+	5427	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	12	0	intron_retention	FALSE	canonical	3	24	junction_5	46.725093632865	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	30201603	30249020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
tx.5987	chr14	+	2086	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	37	1100	-13	-4	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	2092	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCTCAGACTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	30271124	30295577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
tx.5988	chr14	-	2352	15	FSM	ENSMUSG00000021948.18	ENSMUST00000112207.8	2139	15	25	-238	25	0	multi-exon	TRUE	canonical	3	87	junction_13	15.3483363453968	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	448	False	NA	NA	False	NA	NA	NA	30329754	30317310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564
tx.5989	chr14	-	2776	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	0	1	0	1	multi-exon	FALSE	canonical	3	76	junction_17	15.936508975905	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCTGTGGGGACATTT	5421	False	NA	NA	False	NA	NA	NA	30348167	30317311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
tx.599	chr1	+	2850	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	-38	3	-38	-3	multi-exon	FALSE	canonical	3	23	junction_7	6.01698276818648	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGCATTCTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	91294113	91301936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
tx.5990	chr14	+	2374	13	FSM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	13	0	-2	0	multi-exon	FALSE	canonical	3	31	junction_11	8.01171017948103	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376329	30413274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
tx.5991	chr14	+	4689	22	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	6	1141	combination_of_known_splicesites	TRUE	canonical	3	21	junction_1	23.7565124142027	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATTGTGAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30437577	30541444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
tx.5992	chr14	+	4595	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	8	3234	8	1141	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATTGTGAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30437579	30541444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
tx.5993	chr14	+	4521	21	FSM	ENSMUSG00000006527.17	ENSMUST00000228006.2	3299	21	-434	-788	-434	788	multi-exon	FALSE	canonical	2	11	junction_1	22.2285852001426	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAGCTCATTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	30438013	30541091	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30438546_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
tx.5994	chr14	+	3728	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	8	6	4	-6	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGAGACATGGTGGTTGC	NA	False	NA	NA	False	NA	NA	NA	30547554	30599161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
tx.5995	chr14	+	3809	9	FSM	ENSMUSG00000006526.14	ENSMUST00000227246.2	3822	9	7	6	3	-6	multi-exon	FALSE	canonical	1	2	junction_2	95.194209382714	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGAGACATGGTGGTTGC	NA	False	NA	NA	False	NA	NA	NA	30547553	30599161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30547848_30584836_30584886_30585144_30585225_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
tx.5996	chr14	+	4160	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	82	3	1	0	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTGTGTATGGTGT	NA	False	NA	NA	False	NA	NA	NA	30673415	30710775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
tx.5997	chr14	+	4017	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	82	-1	1	1	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGTGTATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	30673415	30710776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
tx.5998	chr14	-	703	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228736.2	702	4	0	-1	0	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	358	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	30723320	30721782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
tx.5999	chr14	+	1498	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	28.2055944017416	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3526	False	NA	NA	False	NA	NA	NA	30723356	30733947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
tx.6	chr1	+	2569	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	330	junction_4	508.177450294338	418	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTTTTTGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	4928014	4968131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959682_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
tx.60	chr1	-	3404	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	26	-1515	intron_retention	FALSE	canonical	3	2151	junction_4	166.606842596575	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730744	13695068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
tx.600	chr1	-	1389	12	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	124.787157635487	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAGTGACTGGTCCTG	NA	False	NA	NA	False	NA	NA	NA	91326542	91303550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316169_91318328_91318386_91318853_91318920_91326372
tx.6000	chr14	+	1594	11	NIC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	48.6193377165917	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3527	False	NA	NA	False	NA	NA	NA	30723357	30733948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_30723386_30726651_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
tx.6001	chr14	+	1815	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	203	0	-23	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2321823686655	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3779	False	NA	NA	False	NA	NA	NA	30723609	30733948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
tx.6002	chr14	+	1683	10	NNC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	35.7536150291732	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3791	False	NA	NA	False	NA	NA	NA	30723621	30733948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_30723835_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
tx.6003	chr14	-	1856	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	91	0	-17	0	multi-exon	TRUE	canonical	3	775	junction_10	82.9678140200482	554	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	30741018	30734389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
tx.6004	chr14	+	8059	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_27	42.8276316807247	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8228	False	NA	NA	False	NA	NA	NA	30741107	30843549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
tx.6005	chr14	+	7930	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	45.903473603736	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8217	False	NA	NA	False	NA	NA	NA	30741096	30843549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
tx.6006	chr14	+	7894	31	FSM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	13	0	2	0	multi-exon	FALSE	canonical	3	94	junction_27	38.4939244845498	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8228	False	NA	NA	False	NA	NA	NA	30741107	30843549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
tx.6007	chr14	+	8103	33	FSM	ENSMUSG00000042323.18	ENSMUST00000112098.11	6566	33	13	-1550	2	-1	multi-exon	FALSE	canonical	3	38	junction_15	51.2482373934704	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8228	False	NA	NA	False	NA	NA	NA	30741107	30843548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
tx.6008	chr14	+	7597	29	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	44.8630569349774	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8228	False	NA	NA	False	NA	NA	NA	30741107	30843548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
tx.6009	chr14	-	432	2	FSM	ENSMUSG00000058351.12	ENSMUST00000049732.11	311	2	-117	-4	1	4	multi-exon	FALSE	canonical	3	152	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCAGCCATTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	30850912	30846457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30846567_30850589
tx.601	chr1	-	1407	12	FSM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	-36	-3	-4	3	multi-exon	FALSE	canonical	3	426	junction_9	38.9197096809944	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGACTGGTCCTGA	NA	False	NA	NA	False	NA	NA	NA	91326541	91303549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
tx.6010	chr14	+	1830	14	FSM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	17	1	17	0	multi-exon	FALSE	canonical	3	528	junction_7	36.4029064448587	684	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGCTTCATTCCAGC	NA	False	NA	NA	False	NA	NA	NA	30853026	30861080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
tx.6011	chr14	-	5452	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	107	0	6	0	multi-exon	FALSE	canonical	3	883	junction_8	71.9902076674321	2112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9428	False	NA	NA	False	NA	NA	NA	30928651	30892886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
tx.6012	chr14	-	2013	10	FSM	ENSMUSG00000021902.8	ENSMUST00000226565.2	1971	10	-44	2	-42	-2	multi-exon	FALSE	canonical	3	15	junction_2	5.27280467453541	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCCTTGTGAATTGGCT	NA	False	NA	NA	False	NA	NA	NA	30973316	30959647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30960111_30960293_30960440_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
tx.6013	chr14	-	2102	11	FSM	ENSMUSG00000021902.8	ENSMUST00000022459.5	2084	11	-13	-5	-13	-1	multi-exon	FALSE	canonical	3	5	junction_2	8.85945822271317	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTTGTGAATTGGCTC	NA	False	NA	NA	False	NA	NA	NA	30973287	30959646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_30960111_30960293_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
tx.6014	chr14	+	3409	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	36	15	-17	-1	multi-exon	TRUE	canonical	3	305	junction_12	31.9899886683318	753	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	NA	False	NA	NA	NA	30973442	30981886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
tx.6015	chr14	+	3643	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	5	0	5	0	multi-exon	TRUE	canonical	3	214	junction_6	22.7354348979737	468	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTTTAATGTCCAG	NA	False	NA	NA	False	NA	NA	NA	31058599	31093941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
tx.6016	chr14	-	2717	9	FSM	ENSMUSG00000021892.15	ENSMUST00000091903.5	2684	9	-25	-8	-12	8	multi-exon	FALSE	canonical	1	5	junction_3	1.69096865730859	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCACTGTTGTCTGTCTTC	5883	False	NA	NA	False	NA	NA	NA	31158047	31095733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_31097159_31097560_31097822_31099347_31099568_31100234_31100278_31101345_31101477_31109675_31109841_31133497_31133627_31156039_31156103_31157767
tx.6017	chr14	-	1822	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228181.2	793	5	-38	-991	0	793	multi-exon	FALSE	canonical	3	35	junction_1	108.841628065736	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	31216987	31200748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_31201768_31209527_31209699_31214278_31214414_31215553_31215922_31216858
tx.6018	chr14	-	2115	7	NNC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	0	793	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	123.583642391162	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	31216987	31200748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31211125_31211277_31214278_31214414_31215553_31215922_31216858
tx.6019	chr14	-	1962	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	10	1974	0	791	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	302	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGTGAATGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	31216987	31200750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
tx.602	chr1	-	1339	11	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	148.435305773256	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAGTGACTGGTCCTG	NA	False	NA	NA	False	NA	NA	NA	91326540	91303550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91326372
tx.6020	chr14	+	4013	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	730	175	-67	-175	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	637	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGTCTTGTTTTATT	6332	False	NA	NA	False	NA	NA	NA	31217085	31231640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
tx.6021	chr14	-	2286	17	FSM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	-296	654	-3	116	multi-exon	FALSE	canonical	3	36	junction_9	6.10199762372946	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTGTTTT	6649	False	NA	NA	False	NA	NA	NA	31363217	31329809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
tx.6022	chr14	-	2168	15	NIC	ENSMUSG00000021884.19	novel	1699	16	NA	NA	-7	116	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	13.7716434482347	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTGTTTT	6645	False	NA	NA	False	NA	NA	NA	31363221	31329809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31362450_31362556_31362745
tx.6023	chr14	+	1933	4	FSM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	0	391	0	-391	multi-exon	FALSE	canonical	1	3	junction_2	7.40870359029762	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGCAGAATACTGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	31363013	31390145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_31363093_31384026_31384283_31387838_31387989_31388697
tx.6024	chr14	-	6738	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-32	6	-32	-6	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	299	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCAAGTGTCTTTCT	5248	False	NA	NA	False	NA	NA	NA	31552640	31420730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
tx.6025	chr14	-	6694	27	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_24	35.2117222614201	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5227	False	NA	NA	False	NA	NA	NA	31552661	31420724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31486210_31486290_31500878_31500963_31552283
tx.6026	chr14	-	4615	29	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	32.5250884326395	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5250	False	NA	NA	False	NA	NA	NA	31552638	31420724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_31421683_31423809_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
tx.6027	chr14	-	7064	30	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-118	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	51.9016952428764	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5162	False	NA	NA	False	NA	NA	NA	31552726	31420724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31538036_31538148_31539171_31539295_31552283
tx.6028	chr14	-	2951	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	0	2	0	-2	multi-exon	FALSE	canonical	3	570	junction_1	6	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATTCATGTTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	31807566	31802527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_31805204_31806863_31806939_31807366
tx.6029	chr14	-	2321	2	FSM	ENSMUSG00000021905.15	ENSMUST00000112000.2	486	2	-11	-1824	-11	0	multi-exon	FALSE	canonical	3	582	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTGTCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	31807577	31804828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_31806939_31807366
tx.603	chr1	-	1393	12	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	140.659720690727	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGAGTGACTGGTCCT	NA	False	NA	NA	False	NA	NA	NA	91326539	91303551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318386_91318853_91318920_91326372
tx.6030	chr14	+	2013	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	364	-1	-8	1	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	200	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	31807733	31825160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
tx.6031	chr14	+	3398	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	62	605	-11	3	multi-exon	TRUE	canonical	3	533	junction_6	51.0289194210886	685	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGTGTTTGTGTTATC	NA	False	NA	NA	False	NA	NA	NA	31881883	31901207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
tx.6032	chr14	-	1153	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	15	5	-4	-5	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	1212	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACATAGTATCTCCATT	NA	False	NA	NA	False	NA	NA	NA	31923840	31902123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
tx.6033	chr14	+	3794	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	134	junction_15	101.735663996062	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	NA	False	NA	NA	NA	31923914	32019177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
tx.6034	chr14	+	4074	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	9	330	9	0	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	540	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	NA	False	NA	NA	NA	31923914	32019177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
tx.6035	chr14	-	4000	2	NNC	ENSMUSG00000115691.2	novel	1833	2	NA	NA	10691	2161	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTCTTATTTCTTATT	NA	False	NA	NA	False	NA	NA	NA	32029251	32023457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_32027353_32029146
tx.6036	chr14	+	3733	24	FSM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	-10	0	-10	0	multi-exon	TRUE	canonical	3	463	junction_11	40.4855688541514	854	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	32043965	32070108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
tx.6037	chr14	-	1928	11	ISM	ENSMUSG00000051506.18	ENSMUST00000130509.10	10158	62	207844	23	46115	-23	3prime_fragment	FALSE	canonical	3	5	junction_6	4.28485705712571	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAAGGCTGCTTGAGCG	8590	False	NA	NA	False	NA	NA	NA	32699179	32681526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_32681962_32682698_32682811_32686495_32686581_32688320_32688504_32689429_32689610_32692779_32692939_32693534_32693720_32695492_32695644_32696111_32696325_32697111_32697204_32699046
tx.6038	chr14	+	5883	2	ISM	ENSMUSG00000041673.13	ENSMUST00000120951.2	1511	5	3710	6	-97	-6	intron_retention	FALSE	canonical	3	9	junction_1	0	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTAAGACTGAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	32717124	32736106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_32717266_32730364
tx.6039	chr14	+	2497	3	ISM	ENSMUSG00000041673.13	ENSMUST00000038956.12	2587	4	3768	-9	-115	9	3prime_fragment	FALSE	canonical	3	4	junction_2	2.5	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGGCTTCTGTGTCTA	NA	False	NA	NA	False	NA	NA	NA	32717106	32737257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_32717266_32730364_32731227_32735781
tx.604	chr1	-	1554	3	FSM	ENSMUSG00000067071.9	ENSMUST00000126136.8	1573	3	4	15	4	-15	multi-exon	FALSE	canonical	3	120	junction_1	9	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTGTACTGTCATTGA	NA	False	NA	NA	False	NA	NA	NA	91340940	91339219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_91340525_91340614_91340702_91340778
tx.6040	chr14	+	1942	12	FSM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	-62	0	-62	0	multi-exon	FALSE	canonical	2	6	junction_2	1.55345522642137	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGGATTTGTGGGG	NA	False	NA	NA	False	NA	NA	NA	33807875	33822528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
tx.6041	chr14	-	3679	11	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-51	3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	27.4082104486958	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGCTTTTATTATTTG	NA	False	NA	NA	False	NA	NA	NA	34032501	33958986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_33959544_33960637_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
tx.6042	chr14	-	3590	12	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	25.9930060523281	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	34032506	33958989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_33995443_33995534_34030996_34031052_34032123
tx.6043	chr14	-	3524	11	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	20.0858158908221	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	34032506	33958989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
tx.6044	chr14	-	3504	11	FSM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	-187	0	-60	0	multi-exon	FALSE	canonical	3	23	junction_8	23.9376272842569	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	34032510	33958989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_34030996_34031052_34032123
tx.6045	chr14	-	3427	10	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	24.9131825880731	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	34032499	33958989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_34030996_34031052_34032123
tx.6046	chr14	-	3360	10	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	31.7587355533972	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	34032474	33958989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33989457_33990910_33991427_33991494_34030996_34031052_34032123
tx.6047	chr14	-	3284	4	NIC	ENSMUSG00000041471.10	novel	774	3	NA	NA	26	6	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.7332502076846	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTTAATGTGAACTTAT	NA	False	NA	NA	False	NA	NA	NA	34032424	33988071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_33990910_33995443_33995534_34030996_34031052_34032123
tx.6048	chr14	+	3090	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-58	358	-58	-358	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	2499	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTCTTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	34032625	34066864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
tx.6049	chr14	-	467	3	FSM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	-63	4	-63	-4	multi-exon	FALSE	canonical	3	2248	junction_2	168.5	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCCTGAGTTTACCTC	NA	False	NA	NA	False	NA	NA	NA	34077453	34073841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_34074035_34075654_34075718_34077242
tx.605	chr1	-	1316	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	4	15	4	-15	multi-exon	FALSE	canonical	3	93	junction_1	18.4932420089069	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTGTACTGTCATTGA	NA	False	NA	NA	False	NA	NA	NA	91340940	91339219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
tx.6050	chr14	+	3931	7	FSM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	43	0	43	0	multi-exon	FALSE	canonical	3	26	junction_3	15.3260852434302	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	4933	False	NA	NA	False	NA	NA	NA	34097464	34126244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
tx.6051	chr14	+	3899	7	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	3064	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.0969870599771	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	8210	False	NA	NA	False	NA	NA	NA	34100741	34126244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_34100981_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
tx.6052	chr14	+	2529	2	ISM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	23002	3	22746	-3	3prime_fragment	FALSE	canonical	3	70	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTGCCTGTTTACTG	NA	False	NA	NA	False	NA	NA	NA	34120423	34126241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_34121581_34124869
tx.6053	chr14	-	5828	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	18	-330	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	41.8421943828145	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATGTGTTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	34224626	34133020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34223318_34223539_34224351
tx.6054	chr14	-	4364	5	ISM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	77587	332	35456	-332	3prime_fragment	FALSE	canonical	3	104	junction_4	13.6633634219397	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	5422	False	NA	NA	False	NA	NA	NA	34147057	34133022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902
tx.6055	chr14	-	5606	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	18	332	18	-332	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	34224626	34133022	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
tx.6056	chr14	-	5602	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	27	-330	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_12	27.8581476212775	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATGTGTTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	34224617	34133020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34224351
tx.6057	chr14	-	5814	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	37	-328	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	42.7092828344926	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGTGTTTTGTGATGC	NA	False	NA	NA	False	NA	NA	NA	34224607	34133018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34223318_34223539_34224351
tx.6058	chr14	-	229	2	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATTCATTTGTGCCCTA	2420	False	NA	NA	False	NA	NA	NA	34458072	34393456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_34393499_34457885
tx.6059	chr14	+	6384	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-34	1	-34	-1	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	1229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	NA	False	NA	NA	NA	34395850	34469939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
tx.606	chr1	+	2392	5	ISM	ENSMUSG00000034292.14	ENSMUST00000189341.7	2257	16	0	25171	0	-25171	5prime_fragment	FALSE	canonical	3	49	junction_3	4.55521678957215	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATTACTTACTGAACCA	8937	False	NA	NA	False	NA	NA	NA	91422368	91430507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726
tx.6060	chr14	+	6372	19	FSM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	-285	-1902	-40	-1	multi-exon	FALSE	canonical	3	148	junction_3	211.44655367664	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	NA	False	NA	NA	NA	34395844	34469939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
tx.6061	chr14	+	5199	17	ISM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	17952	0	-2457	0	3prime_fragment	FALSE	canonical	3	770	junction_1	83.176746111819	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	NA	False	NA	NA	NA	34413836	34469940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
tx.6062	chr14	+	1288	3	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	29.5	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCAGTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34496509	34500225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_34496610_34498763_34498875_34499148
tx.6063	chr14	-	7404	10	FSM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	-72	2	18	-2	multi-exon	FALSE	canonical	3	47	junction_1	10.4432623444526	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCTCCACAGCTT	NA	False	NA	NA	False	NA	NA	NA	36690716	36596894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
tx.6064	chr14	-	7387	10	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	23.247992081091	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	36690733	36596892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640518_36648795_36648887_36660540_36660738_36661768_36663222_36690498
tx.6065	chr14	-	6829	9	ISM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	27782	0	-960	0	3prime_fragment	FALSE	canonical	3	47	junction_1	11.056672193748	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	36662862	36596892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768
tx.6066	chr14	-	7503	11	FSM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	4	2	4	-2	multi-exon	FALSE	canonical	3	13	junction_1	23.4444023169711	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCTCCACAGCTT	NA	False	NA	NA	False	NA	NA	NA	36690730	36596894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
tx.6067	chr14	-	4171	16	NIC	ENSMUSG00000021803.11	novel	4332	17	NA	NA	66	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_15	5.55937646383717	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGACCTCCCGGTCCTC	NA	False	NA	NA	False	NA	NA	NA	36820238	36799812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36820045
tx.6068	chr14	-	4258	17	FSM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	74	0	74	0	multi-exon	TRUE	canonical	2	4	junction_16	5.32351798625683	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGACCTCCCGGTCCT	NA	False	NA	NA	False	NA	NA	NA	36820230	36799813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218_36819315_36820045
tx.6069	chr14	-	2508	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-45	725	-25	7	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	5032	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	36857254	36842773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
tx.607	chr1	+	3507	14	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	15.1149442096734	75	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTATGGACTGTCAAAT	8945	False	NA	NA	False	NA	NA	NA	91422376	91457027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435306_91447297_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
tx.6070	chr14	-	5932	9	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-747	2268	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	6.40190401365094	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGCCTCCTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	40615970	40533477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738_40614927_40615685
tx.6071	chr14	-	6043	8	FSM	ENSMUSG00000037833.15	ENSMUST00000096000.4	1597	8	-103	-4343	-103	2264	multi-exon	FALSE	canonical	3	14	junction_2	5.69998209807429	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGAATGGCCTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	40615326	40533481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738
tx.6072	chr14	-	2571	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-98	2	-98	0	multi-exon	TRUE	canonical	3	610	junction_1	26.6868413267663	779	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTTGGTGATAAATTGA	NA	False	NA	NA	False	NA	NA	NA	40688862	40628403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
tx.6073	chr14	-	1586	6	FSM	ENSMUSG00000021792.16	ENSMUST00000118466.8	1567	6	-14	-5	-14	5	multi-exon	FALSE	canonical	3	166	junction_5	66.6111101844129	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGTGCACAAGTTT	NA	False	NA	NA	False	NA	NA	NA	40735759	40715691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735654
tx.6074	chr14	-	1569	6	FSM	ENSMUSG00000021792.16	ENSMUST00000022317.15	1537	6	-27	-5	-14	5	multi-exon	FALSE	canonical	3	150	junction_5	72.4911029023562	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGTGCACAAGTTT	NA	False	NA	NA	False	NA	NA	NA	40735759	40715691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
tx.6075	chr14	-	1658	6	NIC	ENSMUSG00000021792.16	novel	1567	6	NA	NA	-14	5	combination_of_known_junctions	TRUE	canonical	3	17	junction_5	123.38816799029	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGTGCACAAGTTT	NA	False	NA	NA	False	NA	NA	NA	40735759	40715691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735582
tx.6076	chr14	+	1031	3	Antisense	novelGene_ENSMUSG00000091847.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	5	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTATGATCCATTTC	NA	False	NA	NA	False	NA	NA	NA	41085318	41102270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_+_41085450_41089611_41090056_41101814
tx.6077	chr14	+	5391	2	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	8691	False	NA	NA	False	NA	NA	NA	41146569	41152559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_41146812_41147410
tx.6078	chr14	+	1884	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	5	intron_retention	TRUE	canonical	3	21	junction_4	63.0672040146241	36	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTAAGAAACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	41761472	41825783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
tx.6079	chr14	+	1946	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	337	intron_retention	FALSE	canonical	3	21	junction_4	63.2262252198845	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATAAAAGCTCTAGAAAA	NA	False	NA	NA	False	NA	NA	NA	41761472	41826115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_41761595_41761988_41762060_41766111_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
tx.608	chr1	+	5303	5	FSM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	-100	623	47	-623	multi-exon	FALSE	canonical	3	11	junction_1	8.86002257333467	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACATGCCTTAATTTT	8855	False	NA	NA	False	NA	NA	NA	91468335	91486688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91468587_91471872_91472020_91474649_91474953_91479775_91480162_91482472
tx.6080	chr14	+	1937	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	359	intron_retention	FALSE	canonical	3	16	junction_2	69.184937345896	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACATGTATGCTTCTGCT	NA	False	NA	NA	False	NA	NA	NA	41761472	41826137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_41761595_41761988_41762060_41766142_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
tx.6081	chr14	+	2034	4	Fusion	ENSMUSG00000115262.2_ENSMUSG00000094151.2	novel	690	2	NA	NA	-285	270	multi-exon	FALSE	canonical	0	0	junction_1	11.6714276000077	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGGCCCATATGCTCT	NA	False	NA	NA	False	NA	NA	NA	42988575	43045715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_+_42988898_43039360_43039493_43040175_43040358_43044317
tx.6082	chr14	+	1448	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228505.2	1591	4	-200	343	-18	-336	multi-exon	FALSE	canonical	3	45	junction_2	11.5854314646552	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	43132474	43163125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_43132821_43157302_43157435_43158114_43158297_43162337
tx.6083	chr14	+	2427	8	NNC	ENSMUSG00000090788.3	novel	1387	5	NA	NA	-73731	363	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	48.8128454154336	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATGTATGCTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	43169939	43251844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_43170061_43170454_43170526_43173084_43173568_43243668_43243801_43244528_43244692_43245648_43245781_43246462_43246644_43250700
tx.6084	chr14	+	1732	8	NNC	ENSMUSG00000090788.3	novel	1387	5	NA	NA	-73732	7	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_5	49.2250143810678	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAAGAAACTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	43169938	43251488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_43170061_43170454_43170526_43173424_43173568_43243668_43243801_43244528_43244692_43245648_43245781_43246462_43246644_43250700
tx.6085	chr14	-	3605	21	FSM	ENSMUSG00000021830.15	ENSMUST00000022377.11	4028	21	-26	449	5	10	multi-exon	FALSE	canonical	3	11	junction_1	7.23100961138899	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGCATTGTACATGT	NA	False	NA	NA	False	NA	NA	NA	45456877	45372353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
tx.6086	chr14	-	3660	20	ISM	ENSMUSG00000021830.15	ENSMUST00000139526.9	5045	21	118	1434	57	8	intron_retention	FALSE	canonical	3	25	junction_19	5.29359619397059	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTTGCATTGTACAT	NA	False	NA	NA	False	NA	NA	NA	45456764	45372355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452
tx.6087	chr14	-	3607	21	FSM	ENSMUSG00000021830.15	ENSMUST00000139526.9	5045	21	4	1434	4	8	multi-exon	FALSE	canonical	3	25	junction_19	5.21152568831815	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTTGCATTGTACAT	NA	False	NA	NA	False	NA	NA	NA	45456878	45372355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
tx.6088	chr14	-	3883	22	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	0	8	intron_retention	FALSE	canonical	2	4	junction_20	9.63859400177566	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTTGCATTGTACAT	NA	False	NA	NA	False	NA	NA	NA	45456882	45372355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456673
tx.6089	chr14	-	4377	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	34	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.639737711466	962	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATATCTTTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	45555995	45520550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
tx.609	chr1	+	5834	5	FSM	ENSMUSG00000026311.17	ENSMUST00000086843.11	2490	5	153	-3497	-17	-4	multi-exon	FALSE	canonical	3	23	junction_1	3.93700393700591	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTGTCTGGCTCTCTA	8938	False	NA	NA	False	NA	NA	NA	91468418	91487307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_91468587_91471877_91472020_91474649_91474953_91479775_91480162_91482472
tx.6090	chr14	-	4322	15	NIC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	33	-51	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	176.639737711466	104	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCAGTAGACTGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	45555996	45520594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
tx.6091	chr14	+	2171	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	39	24	-1	-24	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	896	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTCATAAATACCAAAGGA	NA	False	NA	NA	False	NA	NA	NA	45567283	45587138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
tx.6092	chr14	+	2346	14	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	2	-17	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	461.412777759015	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACCAAAGGACTAACCA	NA	False	NA	NA	False	NA	NA	NA	45567286	45587145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_45567561_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
tx.6093	chr14	+	4266	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	91	8617	7	7	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTGAGAAGCTCATTC	NA	False	NA	NA	False	NA	NA	NA	45588640	45614347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
tx.6094	chr14	+	4339	11	NNC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	-15	2	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_3	78.8901134490248	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAATGATTGAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	45588618	45614342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_45588987_45592402_45592436_45594169_45594280_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
tx.6095	chr14	-	2709	6	NIC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-64	7	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	472.830371274943	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCAGGTAACTGCTCAT	NA	False	NA	NA	False	NA	NA	NA	45626314	45613783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_45615944_45618393_45618474_45619012_45619141_45620850_45620914_45622037_45622206_45626204
tx.6096	chr14	-	2051	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	91	646	-77	-646	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	592	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTGGGAGTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	45626327	45614436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
tx.6097	chr14	-	4219	5	FSM	ENSMUSG00000037722.9	ENSMUST00000227468.2	1490	5	-2026	-703	1231	703	multi-exon	FALSE	canonical	3	1091	junction_1	77.5387000148958	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	45624967	45614907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037
tx.6098	chr14	-	2942	13	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	25387	0	14209	0	3prime_fragment	FALSE	canonical	3	310	junction_11	29.1328375243851	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	False	NA	NA	False	NA	NA	NA	45742188	45696251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953
tx.6099	chr14	-	3349	14	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	286	0	-46	0	3prime_fragment	FALSE	canonical	3	310	junction_11	30.5207272668822	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	False	NA	NA	False	NA	NA	NA	45767289	45696251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881
tx.61	chr1	-	3007	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-162	-1515	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_6	847.959003857039	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730932	13695068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730686
tx.610	chr1	+	5228	2	ISM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	11338	-1	10972	1	3prime_fragment	FALSE	canonical	3	28	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGGCTCTCTAGCTCT	NA	False	NA	NA	False	NA	NA	NA	91479773	91487312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_91480162_91482472
tx.6100	chr14	-	3231	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	62	0	62	0	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	557	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	False	NA	NA	False	NA	NA	NA	45767513	45696251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
tx.6101	chr14	-	3448	12	FSM	ENSMUSG00000037697.20	ENSMUST00000051310.13	5012	12	16	1548	15	0	multi-exon	FALSE	canonical	3	14	junction_1	31.1368613098913	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTTCAATTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	45895584	45832178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
tx.6102	chr14	-	3734	13	FSM	ENSMUSG00000037697.20	ENSMUST00000111828.4	9802	13	0	6068	0	187	multi-exon	FALSE	canonical	3	71	junction_11	14.0049594390305	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTGTGGGAGCAGGAT	NA	False	NA	NA	False	NA	NA	NA	45895599	45831991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
tx.6103	chr14	-	3649	14	FSM	ENSMUSG00000037697.20	ENSMUST00000087320.13	9820	14	-79	6250	2	2	multi-exon	FALSE	canonical	3	27	junction_12	30.2633412313513	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTCAATTATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	45895597	45832176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
tx.6104	chr14	-	3282	2	ISM	ENSMUSG00000037697.20	ENSMUST00000051310.13	5012	12	-18	34238	-18	995	5prime_fragment	FALSE	canonical	3	117	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	45895618	45864868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_45867211_45894678
tx.6105	chr14	+	528	1	FSM	ENSMUSG00000044285.9	ENSMUST00000111388.5	685	1	330	-173	330	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	3	0	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCAAGAAGGTGGACTC	NA	False	NA	NA	False	NA	NA	NA	46321914	46322442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_46321900_46322400
tx.6106	chr14	-	1778	3	ISM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	3309	0	-56	0	3prime_fragment	FALSE	canonical	3	35	junction_2	1.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGACCTTTCTATCTTAT	9674	False	NA	NA	False	NA	NA	NA	46624817	46620976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_46622170_46623171_46623552_46624612
tx.6107	chr14	-	2004	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	60	0	-59	0	multi-exon	FALSE	canonical	3	24	junction_3	6.0184900284226	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGACCTTTCTATCTTAT	6425	False	NA	NA	False	NA	NA	NA	46628066	46620976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
tx.6108	chr14	+	813	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	-2	-64	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGCTTGAGTCATGAAT	NA	False	NA	NA	False	NA	NA	NA	46998040	47009062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
tx.6109	chr14	-	1369	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	66	103	-11	-103	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	200	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTGCTGTGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47025802	47013126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
tx.611	chr1	-	8076	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_26	29.6698799314714	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	6592	False	NA	NA	False	NA	NA	NA	92108025	91856501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
tx.6110	chr14	-	4328	8	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	265.835072393177	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCTAGTGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	47059699	47045608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47055872_47056033_47059557
tx.6111	chr14	-	4145	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	24	2	24	-2	multi-exon	FALSE	canonical	0	0	junction_3	212.21091447478	747	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTAGTGTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	47059675	47045607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
tx.6112	chr14	-	3869	3	FSM	ENSMUSG00000062014.14	ENSMUST00000228065.2	280	3	-66	-3523	20	-2	multi-exon	FALSE	canonical	2	4	junction_2	282	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTAGTGTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	47059679	47045607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_47049281_47051700_47051775_47059557
tx.6113	chr14	+	1233	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	94	-3	0	3	multi-exon	FALSE	canonical	3	30	junction_4	10.2097992144802	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACTGTCTTTGTCGAT	631	False	NA	NA	False	NA	NA	NA	47069675	47091653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
tx.6114	chr14	-	2805	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	-31	1	-31	-1	multi-exon	FALSE	canonical	3	47	junction_1	5.3665631459995	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGTGGATGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	47426901	47391352	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
tx.6115	chr14	-	4264	25	FSM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	-4	0	-4	0	multi-exon	FALSE	canonical	1	98	junction_11	68.6814304516795	433	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	47514293	47478400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
tx.6116	chr14	-	4156	25	FSM	ENSMUSG00000037572.18	ENSMUST00000111792.9	4174	25	18	0	-7	0	multi-exon	FALSE	canonical	1	22	junction_16	87.7556582537876	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	47514296	47478400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504520_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
tx.6117	chr14	+	6878	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	-8	7	-8	-7	multi-exon	FALSE	canonical	3	35	junction_1	0	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAAAGCTTTGTCGTTTT	NA	False	NA	NA	False	NA	NA	NA	47514379	47533552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_47514679_47526973
tx.6118	chr14	+	3269	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	5	1268	5	-1268	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCTGGTAAGATACT	9635	False	NA	NA	False	NA	NA	NA	47535730	47559284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
tx.6119	chr14	+	983	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	24	291	-3	3	multi-exon	TRUE	canonical	3	42	junction_1	20.2286924935845	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	NA	False	NA	NA	NA	47611369	47623254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
tx.612	chr1	-	8332	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	21	-3	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	23.5064198709189	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCTGCTACCTCCTTG	6575	False	NA	NA	False	NA	NA	NA	92108042	91856503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
tx.6120	chr14	+	955	6	FSM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	101	363	-2	3	multi-exon	FALSE	canonical	3	33	junction_1	23.7941169199447	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	NA	False	NA	NA	NA	47611370	47623254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_47611410_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
tx.6121	chr14	-	2766	19	FSM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	192	6	-8	3	multi-exon	FALSE	canonical	3	355	junction_12	54.7968470301389	633	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACATTCTTTTCTTCGCA	NA	False	NA	NA	False	NA	NA	NA	47655672	47625241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
tx.6122	chr14	-	3312	17	FSM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	-38	793	-8	327	multi-exon	FALSE	canonical	3	355	junction_10	53.3282508971558	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCCTTGATCAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	47655672	47626967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
tx.6123	chr14	+	3272	5	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	35.4436171968946	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	NA	False	NA	NA	NA	47710024	47769419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47763661_47763772_47766631
tx.6124	chr14	+	3127	4	FSM	ENSMUSG00000037536.15	ENSMUST00000163324.8	3132	4	1	4	1	0	multi-exon	FALSE	canonical	3	23	junction_2	28.4526897771644	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	47710018	47769415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_47710175_47738250_47738328_47763661_47763772_47766631
tx.6125	chr14	+	2941	2	FSM	ENSMUSG00000037536.15	ENSMUST00000043112.9	2937	2	0	-4	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	47710017	47769415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_47710175_47766631
tx.6126	chr14	+	3053	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	-60	0	-2	0	multi-exon	FALSE	canonical	3	71	junction_1	10.5	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	47710015	47769415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_47710175_47763661_47763772_47766631
tx.6127	chr14	-	3431	10	FSM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	20	-1	-10	0	multi-exon	FALSE	canonical	3	110	junction_3	17.6572301841987	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	47805871	47778349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
tx.6128	chr14	+	4416	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	170.363095695635	33	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	NA	False	NA	NA	NA	47886780	47974018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
tx.6129	chr14	+	4322	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	329	junction_35	142.357057734826	79	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	NA	False	NA	NA	NA	47886775	47974018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
tx.613	chr1	-	4934	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	569	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_11	20.8533907392885	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCCAAGCTAAGAAACTT	6597	False	NA	NA	False	NA	NA	NA	92108020	91859909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
tx.6130	chr14	+	4457	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	128	junction_40	173.452039480659	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	NA	False	NA	NA	NA	47886767	47974020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
tx.6131	chr14	+	4409	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	177.511436251302	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	NA	False	NA	NA	NA	47886774	47974020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
tx.6132	chr14	+	4345	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	405	junction_36	132.185085310088	115	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	47886768	47974019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
tx.6133	chr14	+	4252	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	354	junction_31	131.105569523613	103	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	47886774	47974019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
tx.6134	chr14	+	4417	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	329	junction_36	142.740216389776	79	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	47886768	47974019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
tx.6135	chr14	+	4349	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.349273439967	50	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	47886767	47974019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
tx.6136	chr14	+	5694	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	-17	223	-17	-223	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTTGTCTTTAGACTC	NA	False	NA	NA	False	NA	NA	NA	48358262	48498122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
tx.6137	chr14	+	5189	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	-17	313	13	-313	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTTTGTAAATGTCACT	NA	False	NA	NA	False	NA	NA	NA	48683821	48752600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
tx.6138	chr14	-	2080	4	NNC	ENSMUSG00000021848.17	novel	2144	4	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	13.7194104181711	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	48900443	48895135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_48896784_48898755_48898908_48899900_48900117_48900379
tx.6139	chr14	-	3110	4	NNC	ENSMUSG00000021848.17	novel	723	4	NA	NA	-109	1009	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	16.0485374896143	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTGGATGGCTAGATC	NA	False	NA	NA	False	NA	NA	NA	48900438	48894124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_48896784_48898755_48898932_48899900_48900117_48900379
tx.614	chr1	-	8071	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	27.7003460555574	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	6597	False	NA	NA	False	NA	NA	NA	92108020	91856501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
tx.6140	chr14	-	2107	3	FSM	ENSMUSG00000021848.17	ENSMUST00000122009.8	1737	3	122	-492	122	0	multi-exon	FALSE	canonical	3	33	junction_2	5.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	48900207	48895135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_48896784_48898755_48898908_48899900
tx.6141	chr14	-	2684	4	FSM	ENSMUSG00000021848.17	ENSMUST00000118578.9	2144	4	-538	-2	-123	0	multi-exon	FALSE	canonical	2	4	junction_3	16.8720676464584	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGTCTAGTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	48903101	48895133	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_48896784_48898755_48898908_48899900_48900117_48902435
tx.6142	chr14	-	4500	18	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	-7	1833	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.1734991580529	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTATTTATTCTTTGCAT	NA	False	NA	NA	False	NA	NA	NA	49303860	49249378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_49251807_49252990_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
tx.6143	chr14	-	4392	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	254	8053	-3	1612	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTTTTTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	49303856	49249599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
tx.6144	chr14	+	2864	9	FSM	ENSMUSG00000036291.7	ENSMUST00000227410.2	2544	9	6	-326	-5	272	multi-exon	FALSE	canonical	3	29	junction_2	33.1200467994838	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGTCTTTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	49303993	49325148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_49304322_49311005_49311200_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
tx.6145	chr14	+	2233	2	FSM	ENSMUSG00000036291.7	ENSMUST00000228238.2	3514	2	34	1247	-1	-1247	multi-exon	FALSE	canonical	3	152	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTCATCCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	49303986	49312903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_49304322_49311005
tx.6146	chr14	+	5987	7	NIC	ENSMUSG00000036291.7	novel	6321	8	NA	NA	-5	6	intron_retention	FALSE	canonical	3	8	junction_2	45.2683357571517	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTTATGCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	49303982	49328261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_49304322_49311005_49311652_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
tx.6147	chr14	+	6217	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	31	73	-5	8	multi-exon	TRUE	canonical	3	109	junction_2	12.7487494384703	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTATGCTTTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	49303982	49328263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
tx.6148	chr14	+	3653	4	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-2	-17	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	144.652072996629	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTCTTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	49409680	49428325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_49409835_49415508_49415633_49418162_49418219_49425006
tx.6149	chr14	+	4446	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-2	2	-2	-2	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	628	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATACAGCTGTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	49409680	49428340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
tx.615	chr1	-	4915	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-4	562	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	23.5064198709189	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTGTATTCCAAGCTAA	6594	False	NA	NA	False	NA	NA	NA	92108023	91859916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
tx.6150	chr14	+	4678	4	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	3	-3	intron_retention	FALSE	canonical	3	313	junction_3	7.58653778449403	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATACAGCTGTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	49409685	49428339	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_49410851_49415508_49415633_49418162_49418219_49425006
tx.6151	chr14	+	5311	2	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	282	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	49839815	49846584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_+_49843314_49844771
tx.6152	chr14	-	3104	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	7	5720	-5	-4	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCAATTTATGCTTGCT	NA	False	NA	NA	False	NA	NA	NA	50020833	49919128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
tx.6153	chr14	-	3760	6	NNC	ENSMUSG00000036242.16	novel	8831	8	NA	NA	-1	-13500	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	12.2245654319489	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCTTAAATAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	50020829	49979845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_49981418_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
tx.6154	chr14	-	4104	4	ISM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	9906	4	1817	-4	intron_retention	FALSE	canonical	3	816	junction_3	42.8096562315871	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCCTATAGTTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	51013070	51002875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930
tx.6155	chr14	-	1834	10	FSM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	4	4	4	-4	multi-exon	FALSE	canonical	3	788	junction_6	38.5313724991294	897	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCCTATAGTTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	51022972	51002875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
tx.6156	chr14	-	2798	4	FSM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	-14	-418	10	418	multi-exon	FALSE	canonical	3	834	junction_3	1.69967317119759	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACCCCAAAACC	NA	False	NA	NA	False	NA	NA	NA	51022966	51012488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_51014870_51015213_51015426_51018931_51019065_51022894
tx.6157	chr14	-	1548	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	90.8745701502901	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	8905	False	NA	NA	False	NA	NA	NA	51033156	51026705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_51027470_51029429_51029764_51031014_51031332_51032164_51032234_51033092
tx.6158	chr14	-	1550	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	80.7971998277168	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	8904	False	NA	NA	False	NA	NA	NA	51033157	51026705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_51027470_51027592_51027663_51029429_51029764_51031014_51031332_51033092
tx.6159	chr14	-	1482	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	25	2	25	-2	multi-exon	FALSE	canonical	3	174	junction_1	17.4419672692682	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	8901	False	NA	NA	False	NA	NA	NA	51033160	51026706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
tx.616	chr1	-	4907	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	557	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	20.8533907392885	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTCCACTGTATTCCAA	6597	False	NA	NA	False	NA	NA	NA	92108020	91859921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
tx.6160	chr14	+	1810	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	84	0	0	0	multi-exon	FALSE	canonical	3	692	junction_5	52.2695577431708	721	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	51045381	51058758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
tx.6161	chr14	-	6701	46	ISM	ENSMUSG00000006281.9	ENSMUST00000006444.9	8171	55	14590	2	-1818	-2	3prime_fragment	FALSE	canonical	2	6	junction_37	10.4075945679757	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTATGCCCGATTGTGT	99	False	NA	NA	False	NA	NA	NA	51093427	51061517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084053_51084289_51084467_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046
tx.6162	chr14	-	1262	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	38	2088	-12	0	multi-exon	TRUE	canonical	3	62	junction_9	170.895289578151	418	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTTGTGTTTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	51162312	51153138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
tx.6163	chr14	+	1237	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	2	0	1	0	multi-exon	FALSE	canonical	3	716	junction_1	194.901898400195	679	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	181	False	NA	NA	False	NA	NA	NA	51162426	51164596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
tx.6164	chr14	+	1398	4	FSM	ENSMUSG00000035960.15	ENSMUST00000154288.3	935	4	14	-477	14	0	multi-exon	FALSE	canonical	3	1054	junction_2	68.6310587286997	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	203	False	NA	NA	False	NA	NA	NA	51162448	51164596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_51162782_51162973_51163162_51163617_51163811_51163912
tx.6165	chr14	-	1614	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	-6	1147	1	0	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	520	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	NA	False	NA	NA	NA	51168312	51164671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
tx.6166	chr14	-	1594	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	NA	False	NA	NA	NA	51168313	51164671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
tx.6167	chr14	-	1645	7	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	296.433663180595	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	NA	False	NA	NA	NA	51168323	51164671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_51165495_51166277_51166389_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
tx.6168	chr14	+	1333	6	FSM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	209	1400	5	1118	multi-exon	FALSE	canonical	3	117	junction_1	38.2015706483385	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTGTGTGGTTCGGTA	9239	False	NA	NA	False	NA	NA	NA	51181967	51189469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
tx.6169	chr14	+	1260	6	FSM	ENSMUSG00000068417.9	ENSMUST00000095925.5	1372	6	116	-4	116	4	multi-exon	FALSE	canonical	2	7	junction_3	36.6911433454996	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	51193564	51202210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_51193686_51196971_51197142_51200561_51200666_51200846_51201023_51201135_51201327_51201712
tx.617	chr1	-	1461	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	83	476	-10	-207	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	841	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	92401499	92367207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
tx.6170	chr14	+	1540	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	83	0	7	0	multi-exon	FALSE	canonical	0	0	junction_8	48.1261901412816	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTGATTGC	NA	False	NA	NA	False	NA	NA	NA	52122381	52129325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
tx.6171	chr14	+	1523	4	FSM	ENSMUSG00000072572.10	ENSMUST00000047726.12	2334	4	-126	937	-126	2	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGCAATTCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	52130940	52133265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_52131372_52131545_52131677_52131912_52131964_52132355
tx.6172	chr14	-	2037	16	FSM	ENSMUSG00000004558.16	ENSMUST00000004673.15	2099	16	52	10	2	2	multi-exon	TRUE	canonical	3	23	junction_14	42.8779145429854	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTGTTAATCCGGGTC	NA	False	NA	NA	False	NA	NA	NA	52150835	52142737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52150779
tx.6173	chr14	-	1995	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	110	-2	2	2	multi-exon	FALSE	canonical	3	127	junction_6	11.1385064766607	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTGTTAATCCGGGTC	NA	False	NA	NA	False	NA	NA	NA	52150835	52142737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
tx.6174	chr14	+	5172	23	NIC	ENSMUSG00000004562.17	novel	5108	24	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_22	7.39569340844626	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGAGCTCGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	52222159	52243086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242445_52242493_52242615
tx.6175	chr14	-	2630	3	ISM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	4923	5	916	0	3prime_fragment	FALSE	canonical	3	352	junction_2	36	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	9219	False	NA	NA	False	NA	NA	NA	52247116	52243538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_52244605_52244820_52244953_52245684
tx.6176	chr14	-	2830	5	FSM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	-31	5	-31	0	multi-exon	FALSE	canonical	3	80	junction_4	128.961961446002	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5734	False	NA	NA	False	NA	NA	NA	52252070	52243538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251962
tx.6177	chr14	-	4758	4	ISM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	2488	5	-1212	0	3prime_fragment	FALSE	canonical	3	255	junction_3	69.2451362110646	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	8253	False	NA	NA	False	NA	NA	NA	52249551	52243538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426
tx.6178	chr14	-	2435	7	ISM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	19647	6	13261	-6	3prime_fragment	FALSE	canonical	3	1744	junction_2	773.899146458302	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTGTTAGAAGCTG	6646	False	NA	NA	False	NA	NA	NA	52321815	52311007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571
tx.6179	chr14	-	2630	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1223.61628639314	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTGTTAGAAGCTG	8742	False	NA	NA	False	NA	NA	NA	52341468	52311007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
tx.618	chr1	-	401	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	25	12	25	-12	multi-exon	FALSE	canonical	3	610	junction_1	1	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	92569682	92564878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_92565126_92567408_92567482_92569601
tx.6180	chr14	-	2627	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	-11	1	-9	-1	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	637	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTAGAAGCTGGTGTG	8737	False	NA	NA	False	NA	NA	NA	52341473	52311002	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
tx.6181	chr14	-	2602	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	-7	-904	-7	-3	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	643	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGTTAGAAGCTGGTG	8739	False	NA	NA	False	NA	NA	NA	52341471	52311004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
tx.6182	chr14	-	2596	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-47	-1248	-9	-6	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	444	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTGTTAGAAGCTG	8737	False	NA	NA	False	NA	NA	NA	52341473	52311007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
tx.6183	chr14	-	2644	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	-18	-128	-10	-3	multi-exon	FALSE	canonical	3	714	junction_5	1148.92795139643	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGTTAGAAGCTGGTG	8736	False	NA	NA	False	NA	NA	NA	52341474	52311004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
tx.6184	chr14	-	2665	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	11	171	-10	-3	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGTTAGAAGCTGGTG	8736	False	NA	NA	False	NA	NA	NA	52341474	52311004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
tx.6185	chr14	-	2574	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	-10	-8	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	492	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATGCTGTTAGAAGC	8736	False	NA	NA	False	NA	NA	NA	52341474	52311009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
tx.6186	chr14	-	2617	8	NIC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1238.64623270566	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTGTTAGAAGCTGGT	8736	False	NA	NA	False	NA	NA	NA	52341474	52311005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
tx.6187	chr14	-	4494	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	174	5	174	-5	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	2499	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	NA	False	NA	NA	NA	52434699	52397875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
tx.6188	chr14	-	3835	16	NIC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	12.2401888148109	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTCTTCCTATGTTCTG	NA	False	NA	NA	False	NA	NA	NA	52450477	52435607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450201_52450280
tx.6189	chr14	-	8485	38	FSM	ENSMUSG00000053754.15	ENSMUST00000200169.6	8509	38	24	0	24	0	multi-exon	FALSE	canonical	3	26	junction_15	11.5591027376411	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTCTTCCTATGTTCTG	455	False	NA	NA	False	NA	NA	NA	52495213	52435607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52495134
tx.619	chr1	+	3627	9	FSM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	-19	568	-19	-568	multi-exon	FALSE	canonical	3	25	junction_8	9.32654142756038	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACTGGTAAGACTCGG	7164	False	NA	NA	False	NA	NA	NA	92759347	92787933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
tx.6190	chr14	-	2428	7	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	32223	0	-722	0	3prime_fragment	FALSE	canonical	3	42	junction_3	5.72761342581319	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTCTTCCTATGTTCTG	NA	False	NA	NA	False	NA	NA	NA	52442806	52435607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246
tx.6191	chr14	-	2595	7	ISM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	515	6	211	1	3prime_fragment	FALSE	canonical	3	132	junction_5	7.58653778449403	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTCATGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	52516487	52499221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370
tx.6192	chr14	-	2679	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	221	6	15	1	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTCATGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	52516781	52499221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
tx.6193	chr14	+	3173	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	443	1889	24	-1889	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	976	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTTAAATGTGCATTC	NA	False	NA	NA	False	NA	NA	NA	52517045	52531969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
tx.6194	chr14	-	2006	11	FSM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	5	14	1	2	multi-exon	FALSE	canonical	3	126	junction_7	19.5910693939866	194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAAGTGAAATTATGG	NA	False	NA	NA	False	NA	NA	NA	52542580	52532311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
tx.6195	chr14	-	4680	2	FSM	ENSMUSG00000049532.12	ENSMUST00000135523.5	4773	2	87	6	87	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTTTCTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	52553693	52548634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_52553121_52553499
tx.6196	chr14	-	659	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	213	6	23	-6	multi-exon	FALSE	canonical	3	1530	junction_1	8	427	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATTCGTTCCTTCATG	NA	False	NA	NA	False	NA	NA	NA	54491348	54472941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_54473171_54480155_54480326_54491088
tx.6197	chr14	+	2388	7	FSM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	14	-1	14	1	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	554	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGACACTGTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	54496702	54506622	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
tx.6198	chr14	+	1524	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	-2	1016	-2	20	multi-exon	TRUE	canonical	3	499	junction_4	29.1475598792348	413	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGATGTTTGTTAAGT	NA	False	NA	NA	False	NA	NA	NA	54598295	54606114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
tx.6199	chr14	-	3158	10	ISM	ENSMUSG00000000958.11	ENSMUST00000226753.2	2126	11	-146	0	-45	0	intron_retention	FALSE	canonical	3	45	junction_9	39.09279874325	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	54655282	54606898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045
tx.62	chr1	-	4180	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	10.2268389688172	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGATGTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	14380253	14239176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
tx.620	chr1	+	3052	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	22	263	-20	6	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCCCTTCCTGTCTGTC	6679	False	NA	NA	False	NA	NA	NA	92838526	92848300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
tx.6200	chr14	-	2457	11	NIC	ENSMUSG00000000958.11	novel	2126	11	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	51.7787601242054	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	54655298	54606898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54654944
tx.6201	chr14	-	2327	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-153	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	58.2501788266211	23	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	54655390	54606898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650184_54650242_54651336_54651471_54654045_54654228_54655357
tx.6202	chr14	+	491	4	NIC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	1056	junction_1	226.233409459248	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGACTCTCTCTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	54664365	54667207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_54664418_54664490_54664696_54666040_54666106_54667038
tx.6203	chr14	+	411	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	0	7	0	0	multi-exon	FALSE	canonical	3	1056	junction_1	196.876230154887	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	54664365	54667206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
tx.6204	chr14	+	463	4	FSM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	1331	junction_1	96.858430482615	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	54664386	54667206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_54664549_54664627_54664696_54666040_54666106_54667038
tx.6205	chr14	+	3776	10	FSM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	-6	-1174	-6	1174	multi-exon	FALSE	canonical	0	0	junction_5	5.50644964149505	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGTGACTCGAGCT	NA	False	NA	NA	False	NA	NA	NA	54669062	54679896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
tx.6206	chr14	+	2985	7	FSM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	26	1217	26	537	multi-exon	TRUE	canonical	3	169	junction_1	20.8306664959782	378	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	NA	False	NA	NA	NA	54701619	54707737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
tx.6207	chr14	-	2533	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	150	8	-14	-8	multi-exon	FALSE	canonical	3	685	junction_14	59.4941895797396	1181	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTACCCTGCTTCT	4845	False	NA	NA	False	NA	NA	NA	54754832	54744651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
tx.6208	chr14	-	1566	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	21	0	21	0	multi-exon	FALSE	canonical	3	401	junction_5	37.1423687391577	415	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	54791797	54779241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
tx.6209	chr14	-	3402	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	-4	-1	-4	1	multi-exon	TRUE	canonical	3	297	junction_5	54.835933399886	814	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGTGTATTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	54815019	54804927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
tx.621	chr1	+	2026	3	ISM	ENSMUSG00000026269.15	ENSMUST00000179127.8	1844	7	1442	-1	817	1	3prime_fragment	FALSE	canonical	3	57	junction_2	1	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGACCTCCCTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	92845954	92848295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_92846826_92846905_92847049_92847283
tx.6210	chr14	-	2597	7	FSM	ENSMUSG00000022179.6	ENSMUST00000022786.6	2670	7	74	-1	74	1	multi-exon	FALSE	canonical	3	19	junction_6	4.10960933531265	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTTGGGCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	54843376	54821118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828897_54832570_54833409_54843259
tx.6211	chr14	-	2121	6	ISM	ENSMUSG00000022179.6	ENSMUST00000022786.6	2670	7	10401	-1	-10093	1	3prime_fragment	FALSE	canonical	3	21	junction_1	3.96988664825584	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTTGGGCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	54833049	54821118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828897_54832570
tx.6212	chr14	-	892	3	FSM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	7	0	-7	0	multi-exon	FALSE	canonical	3	1854	junction_2	4.5	637	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGTCCACAGTTATT	8631	False	NA	NA	False	NA	NA	NA	54855472	54851575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_54851939_54853971_54854279_54855250
tx.6213	chr14	-	4637	18	FSM	ENSMUSG00000022185.20	ENSMUST00000111484.9	4048	18	-23	-566	-23	0	multi-exon	FALSE	canonical	3	59	junction_15	148.725217469731	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	2607	False	NA	NA	False	NA	NA	NA	54924411	54879618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
tx.6214	chr14	-	4758	19	FSM	ENSMUSG00000022185.20	ENSMUST00000022793.15	4735	19	-25	2	-25	-1	multi-exon	FALSE	canonical	3	51	junction_16	154.301732625911	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTGCCTTTCCTTG	2605	False	NA	NA	False	NA	NA	NA	54924413	54879619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
tx.6215	chr14	+	1855	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	-15	3	-15	-3	multi-exon	FALSE	canonical	3	385	junction_1	0	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTACTGGTGATTCA	NA	False	NA	NA	False	NA	NA	NA	54923657	54928195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_54924578_54927260
tx.6216	chr14	+	1489	3	FSM	ENSMUSG00000040822.8	ENSMUST00000228027.2	811	3	-53	-625	-32	-3	multi-exon	FALSE	canonical	3	26	junction_1	179.5	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTACTGGTGATTCA	NA	False	NA	NA	False	NA	NA	NA	54923640	54928195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_54924111_54924493_54924578_54927260
tx.6217	chr14	-	2512	5	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	52336	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.1732288239399	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTGATGGAGTTAATAA	9024	False	NA	NA	False	NA	NA	NA	54967051	54959669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54967003
tx.6218	chr14	-	3174	9	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	27049	-7	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	6.32331993497087	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGAGTGATGGAGTTAA	2211	False	NA	NA	False	NA	NA	NA	54992338	54959672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54992133
tx.6219	chr14	-	2585	4	ISM	ENSMUSG00000022180.8	ENSMUST00000022787.8	4084	11	52375	9	52375	-9	3prime_fragment	FALSE	canonical	3	25	junction_1	2.49443825784929	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGGAGTGATGGAGTT	9063	False	NA	NA	False	NA	NA	NA	54967012	54959674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789
tx.622	chr1	+	1717	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-30	-419	-30	419	multi-exon	FALSE	canonical	3	122	junction_1	7.1336448530109	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTGTACGCTATCAC	2620	False	NA	NA	False	NA	NA	NA	92862457	92869113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
tx.6220	chr14	-	2918	2	FSM	ENSMUSG00000057156.11	ENSMUST00000142283.4	4713	2	35	1760	35	4	multi-exon	FALSE	canonical	3	19	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTCTGTGTTTCAAGA	5563	False	NA	NA	False	NA	NA	NA	55101580	55093003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55095739_55101397
tx.6221	chr14	+	208	2	Antisense	novelGene_ENSMUSG00000057156.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCGATCCTTCTCAAGGA	3604	False	NA	NA	False	NA	NA	NA	55098678	55109284	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr14_+_55098827_55109224
tx.6222	chr14	+	1790	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	-5	-755	-5	755	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	832	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	55131599	55136381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
tx.6223	chr14	+	2534	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	-5	-768	-5	755	multi-exon	FALSE	canonical	3	2245	junction_1	149.688209288507	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	55131599	55136381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
tx.6224	chr14	-	3458	6	FSM	ENSMUSG00000022203.8	ENSMUST00000022813.8	2705	6	-849	96	-637	2	multi-exon	TRUE	canonical	3	20	junction_2	3.32264954516723	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCTTCTTGAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	55164220	55154087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158639_55162894
tx.6225	chr14	+	1097	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	97	6	97	-6	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	377	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	55253007	55261588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
tx.6226	chr14	-	7875	9	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	17851	1394	-2239	-1394	3prime_fragment	TRUE	canonical	3	30	junction_7	9.50986330080512	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTCTTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	55311930	55299112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669
tx.6227	chr14	-	4441	2	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	25993	1396	5903	-1396	3prime_fragment	FALSE	canonical	3	63	junction_1	0	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTTCTTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	55303788	55299114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_55301029_55301261
tx.6228	chr14	-	6484	8	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	19388	1396	-702	-1396	3prime_fragment	FALSE	canonical	3	30	junction_7	9.53190132434987	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTTCTTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	55310393	55299114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003
tx.6229	chr14	-	7237	4	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	22493	1401	2403	-1401	3prime_fragment	FALSE	canonical	3	38	junction_3	10.6562449087639	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACAAGTGTTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	55307288	55299119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564
tx.623	chr1	+	2547	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	355	0	-35	0	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAGTCTTGTTCCAAA	2615	False	NA	NA	False	NA	NA	NA	92862452	92875663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
tx.6230	chr14	-	4725	9	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	-44	5949	-44	-4	5prime_fragment	FALSE	canonical	3	30	junction_6	5.85101486923423	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGGCTTTGAGTTA	NA	False	NA	NA	False	NA	NA	NA	55329825	55303667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
tx.6231	chr14	+	2789	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	40	1	40	-1	multi-exon	FALSE	canonical	3	37	junction_1	0	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGGGTCTTTATTTCCGT	NA	False	NA	NA	False	NA	NA	NA	55332280	55336442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55333464_55334836
tx.6232	chr14	-	2644	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	29	0	-3	0	multi-exon	TRUE	canonical	3	99	junction_4	12.8308372870802	182	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGCTGTGAAGTGGC	NA	False	NA	NA	False	NA	NA	NA	55344021	55336306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
tx.6233	chr14	+	1360	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	30	2	9	0	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGCGTGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	55716244	55727795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
tx.6234	chr14	+	996	4	ISM	ENSMUSG00000022210.8	ENSMUST00000226168.2	828	5	-78	6	18	0	intron_retention	FALSE	canonical	3	56	junction_3	6.12825877028341	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCCTAGTCTCTGGG	NA	False	NA	NA	False	NA	NA	NA	55716253	55725028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549
tx.6235	chr14	+	2037	9	NIC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	-30	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	532.016447114185	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGTCTGCATAGG	8984	False	NA	NA	False	NA	NA	NA	55777815	55786392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
tx.6236	chr14	+	2196	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	122	1082	-1	1	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	2007	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGTCTGCATAGG	9013	False	NA	NA	False	NA	NA	NA	55777844	55786392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
tx.6237	chr14	+	3501	13	ISM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	608	0	512	0	3prime_fragment	FALSE	canonical	3	111	junction_12	13.0583625823965	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	55799035	55807521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
tx.6238	chr14	+	2677	15	FSM	ENSMUSG00000022214.16	ENSMUST00000152681.8	2624	15	-50	-3	2	0	multi-exon	TRUE	canonical	3	32	junction_2	36.5692661191033	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	55797940	55807521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55798085_55798531_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
tx.6239	chr14	+	2542	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	39.769296432996	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	55797940	55807521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_55798085_55798666_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
tx.624	chr1	-	8229	46	NNC	ENSMUSG00000014602.16	novel	5391	47	NA	NA	-24	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	3.47946356018664	17	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACACACATCCATTATGT	NA	False	NA	NA	False	NA	NA	NA	93029593	92943189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993768_92993912_92994777_92994857_92996206_92996303_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93029484
tx.6240	chr14	+	2692	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	27.5910366989435	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	55797948	55807521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_55798085_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
tx.6241	chr14	+	2564	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_1	31.9189023390625	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	55797941	55807521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_55798085_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
tx.6242	chr14	+	3106	14	FSM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	-446	0	7	0	multi-exon	FALSE	canonical	3	97	junction_1	16.6800735031656	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	55797981	55807521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
tx.6243	chr14	+	1018	11	FSM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	94	0	-2	0	multi-exon	FALSE	canonical	1	117	junction_4	54.1775783881118	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	False	NA	NA	False	NA	NA	NA	55815910	55818985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
tx.6244	chr14	-	866	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	-8	-3	-8	2	multi-exon	FALSE	canonical	3	89	junction_1	3.69966214673719	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTATTTATTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	55822767	55818975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
tx.6245	chr14	-	838	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	123	1	9	0	multi-exon	FALSE	canonical	3	915	junction_9	61.4455856835949	299	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTGTGTTGTTCATTG	NA	False	NA	NA	False	NA	NA	NA	55828421	55824898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
tx.6246	chr14	+	3427	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	37	21	1	-1	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	266	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGGTGGTCCTTCTT	4211	False	NA	NA	False	NA	NA	NA	55829201	55841129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
tx.6247	chr14	+	2280	9	FSM	ENSMUSG00000002325.16	ENSMUST00000130697.8	2459	9	178	1	178	-1	multi-exon	FALSE	canonical	3	21	junction_1	14.5086181285469	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTCATGTGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	55841619	55847486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
tx.6248	chr14	+	2094	20	FSM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	89	1	89	-1	multi-exon	FALSE	canonical	3	23	junction_6	6.49738920505725	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCCTCTTTTTTTTTT	1417	False	NA	NA	False	NA	NA	NA	55855582	55862851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
tx.6249	chr14	-	3497	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	30	319	-23	0	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	717	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGAAGCAGCTGTGACG	9775	False	NA	NA	False	NA	NA	NA	55873111	55863175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
tx.625	chr1	-	1307	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	42	17	6	-17	multi-exon	FALSE	canonical	3	72	junction_3	7.36357401145817	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGTGCAACCCTTCCAGG	NA	False	NA	NA	False	NA	NA	NA	93233595	93228943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
tx.6250	chr14	-	2481	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	-6	-93	-6	1	multi-exon	FALSE	canonical	3	260	junction_2	41.5060236592232	440	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGTCGTTGGAAGTTT	5200	False	NA	NA	False	NA	NA	NA	55880803	55873423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
tx.6251	chr14	-	1664	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	59	10	2	5	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGACAATTTTCTTTAA	2344	False	NA	NA	False	NA	NA	NA	55897906	55895345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
tx.6252	chr14	-	1734	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	1	-5	1	5	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGACAATTTTCTTTAA	2343	False	NA	NA	False	NA	NA	NA	55897907	55895345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
tx.6253	chr14	-	799	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	25	0	25	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	472	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTCTTTCTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	55909556	55899719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
tx.6254	chr14	+	1505	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	32	456	9	428	multi-exon	TRUE	canonical	3	97	junction_1	15.6828127988557	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAGACGTTCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	55909723	55916201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
tx.6255	chr14	+	1518	10	NIC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	-17	429	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	39.4658783705058	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAGACGTTCTTCTATA	NA	False	NA	NA	False	NA	NA	NA	55909819	55916202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_55909950_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
tx.6256	chr14	-	1874	8	FSM	ENSMUSG00000007589.10	ENSMUST00000228264.2	3130	8	-24	1280	-6	1115	multi-exon	FALSE	canonical	3	280	junction_5	42.7532073030068	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCTCCGAAACATAACAG	NA	False	NA	NA	False	NA	NA	NA	55919267	55916548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
tx.6257	chr14	-	1710	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	10	1236	-6	1105	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	NA	False	NA	NA	NA	55919267	55916558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
tx.6258	chr14	-	2726	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	-1	5	-1	-5	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATGCTGTTTAGTA	395	False	NA	NA	False	NA	NA	NA	55950952	55937495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
tx.6259	chr14	-	1636	9	ISM	ENSMUSG00000022218.17	ENSMUST00000002389.9	2791	15	3515	20	3515	-5	3prime_fragment	FALSE	canonical	3	193	junction_5	15.0312175155574	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATGCTGTTTAGTA	4317	False	NA	NA	False	NA	NA	NA	55947030	55937495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850
tx.626	chr1	-	5091	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	2	686	2	374	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	231	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTGGTTTTCTATTTC	NA	False	NA	NA	False	NA	NA	NA	93270509	93237185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
tx.6260	chr14	-	1645	11	ISM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	2246	-8	203	8	3prime_fragment	FALSE	canonical	3	454	junction_10	29.2567940827426	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTTTCTCACCGGGC	NA	False	NA	NA	False	NA	NA	NA	55957387	55953325	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252
tx.6261	chr14	-	2337	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	6	-457	0	9	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTTCTCACCGGGCA	NA	False	NA	NA	False	NA	NA	NA	55959714	55953324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
tx.6262	chr14	-	2331	15	ISM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	358	-4	358	4	3prime_fragment	FALSE	canonical	3	306	junction_12	81.9057447338596	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAAGCTTTCTCACC	NA	False	NA	NA	False	NA	NA	NA	55959275	55953329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051
tx.6263	chr14	-	2424	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	4	454	4	7	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGCTTTCTCACCGGG	NA	False	NA	NA	False	NA	NA	NA	55959655	55953326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
tx.6264	chr14	-	2279	16	FSM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	272	-4	272	4	multi-exon	FALSE	canonical	3	306	junction_12	87.1219834484959	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAAGCTTTCTCACC	NA	False	NA	NA	False	NA	NA	NA	55959361	55953329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
tx.6265	chr14	-	1420	9	FSM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	57	0	-34	0	multi-exon	FALSE	canonical	3	126	junction_7	15.4833580014156	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTTCTCATTCTGT	NA	False	NA	NA	False	NA	NA	NA	55983090	55976476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
tx.6266	chr14	+	2238	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	17	1439	17	-1439	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	965	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTTATTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	55983166	55991518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
tx.6267	chr14	-	2118	9	ISM	ENSMUSG00000022221.15	ENSMUST00000168716.8	1964	10	1	-1	1	0	intron_retention	FALSE	canonical	3	118	junction_2	9.25928587959136	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	NA	False	NA	NA	NA	56026313	56022451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694
tx.6268	chr14	-	1879	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	13	0	5	0	multi-exon	FALSE	canonical	3	118	junction_2	8.73194786861711	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	NA	False	NA	NA	NA	56026309	56022451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
tx.6269	chr14	+	3980	9	FSM	ENSMUSG00000023411.13	ENSMUST00000172271.9	3775	9	-204	-1	38	1	multi-exon	FALSE	canonical	3	29	junction_5	5.95818764390649	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAGGCTCCAGAGCTCT	NA	False	NA	NA	False	NA	NA	NA	56062289	56071399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
tx.627	chr1	-	5046	18	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-20	354	combination_of_known_junctions	FALSE	canonical	3	33	junction_17	48.1779429495616	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCAGGACTATATGAGA	NA	False	NA	NA	False	NA	NA	NA	93271224	93237205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
tx.6270	chr14	+	7390	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	120	1	101	-1	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATGTTTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56091593	56112192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
tx.6271	chr14	+	7018	7	ISM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	9018	1	8999	-1	3prime_fragment	FALSE	canonical	3	84	junction_4	6.66874967458085	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATGTTTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56100491	56112192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
tx.6272	chr14	+	6132	6	ISM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	10026	0	10007	0	3prime_fragment	FALSE	canonical	3	84	junction_3	6.40624695121879	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56101499	56112193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
tx.6273	chr14	+	4656	2	ISM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	14452	0	14433	0	3prime_fragment	FALSE	canonical	3	97	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56105925	56112193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_56105973_56107584
tx.6274	chr14	+	5869	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	25	-1996	-2	2	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGGCTACTACTCAT	NA	False	NA	NA	False	NA	NA	NA	56122428	56136234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
tx.6275	chr14	+	6370	7	NIC	ENSMUSG00000047153.5	novel	4075	8	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	67	junction_6	6.15539510420646	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTATGGTGGCTACTAC	NA	False	NA	NA	False	NA	NA	NA	56122423	56136230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_56122600_56123230_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
tx.6276	chr14	+	5284	6	ISM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	1742	-1997	1672	3	3prime_fragment	FALSE	canonical	3	67	junction_5	6.74091981854109	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGCTACTACTCATT	NA	False	NA	NA	False	NA	NA	NA	56124145	56136235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
tx.6277	chr14	-	1206	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	47	2	0	-2	multi-exon	FALSE	canonical	3	98	junction_5	35.4547599061113	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCACTGGCTTCCGCTGTC	NA	False	NA	NA	False	NA	NA	NA	56137668	56134741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
tx.6278	chr14	+	4065	24	NNC	ENSMUSG00000022229.4	novel	3950	23	NA	NA	-254	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.5956194011477	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTCATTGTGGCATT	NA	False	NA	NA	False	NA	NA	NA	56602270	56626009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_56602417_56602557_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
tx.6279	chr14	+	4089	23	FSM	ENSMUSG00000022229.4	ENSMUST00000007340.4	3950	23	-138	-1	-138	1	multi-exon	FALSE	canonical	2	6	junction_18	2.50989776223246	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTGTCATTGTGGCAT	NA	False	NA	NA	False	NA	NA	NA	56602386	56626008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
tx.628	chr1	-	4536	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	0	26	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	52.6961650706082	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTTGTTTTTGC	NA	False	NA	NA	False	NA	NA	NA	93270511	93237533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270456
tx.6280	chr14	+	4138	25	ISM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	91	37223	-25	743	5prime_fragment	TRUE	canonical	3	349	junction_12	56.9559862964377	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAAGCACATTTG	NA	False	NA	NA	False	NA	NA	NA	56640128	56725266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
tx.6281	chr14	+	3525	26	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	349	junction_12	57.9852946875326	547	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56640135	56726893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
tx.6282	chr14	+	5165	37	FSM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	99	0	-17	0	multi-exon	FALSE	canonical	3	48	junction_25	208.622769314721	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	NA	False	NA	NA	NA	56640136	56762489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
tx.6283	chr14	-	4346	17	NIC	ENSMUSG00000064128.9	novel	4756	18	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	11.6039796513955	103	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTTTACATTCTTTGA	2387	False	NA	NA	False	NA	NA	NA	56809308	56764218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194
tx.6284	chr14	-	4309	17	NNC	ENSMUSG00000064128.9	novel	4756	18	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_16	15.1471944597011	45	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTTTACATTCTTTG	2373	False	NA	NA	False	NA	NA	NA	56809322	56764219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809244
tx.6285	chr14	+	2925	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	14	0	14	0	multi-exon	FALSE	canonical	3	627	junction_4	88.7108193370776	1187	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1792	False	NA	NA	False	NA	NA	NA	56905718	56934887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
tx.6286	chr14	-	2394	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	-11	1731	-11	1545	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	397	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAAGTAAATCTCTT	NA	False	NA	NA	False	NA	NA	NA	57015784	56959897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
tx.6287	chr14	-	6109	6	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	42	junction_5	17.1464281994822	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGGTGAAAATGAGAT	8803	False	NA	NA	False	NA	NA	NA	57049191	57028041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_57031958_57034060_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
tx.6288	chr14	-	2916	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-19	406	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTGTTTTCTTGTGT	8802	False	NA	NA	False	NA	NA	NA	57049192	57030378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
tx.6289	chr14	-	3035	8	FSM	ENSMUSG00000040123.18	ENSMUST00000111285.9	5351	8	-19	2335	-19	405	multi-exon	FALSE	canonical	3	22	junction_6	24.4798959581623	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8802	False	NA	NA	False	NA	NA	NA	57049192	57030379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
tx.629	chr1	+	3656	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	784	5875	-17	-5875	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	623	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAATCTGATAGACTT	NA	False	NA	NA	False	NA	NA	NA	93271359	93295336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
tx.6290	chr14	+	6787	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-90	-347	combination_of_known_junctions	TRUE	canonical	2	100	junction_12	26.7082683306541	143	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGACGCTCAGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	57124019	57199811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
tx.6291	chr14	+	4949	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	190	186	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	49	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGACTTTCTGCATCA	NA	False	NA	NA	False	NA	NA	NA	57124299	57197995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
tx.6293	chr14	-	2657	2	FSM	ENSMUSG00000048582.8	ENSMUST00000223792.2	284	2	12	-2385	12	1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCTGTGTAAGAACGTGT	NA	False	NA	NA	False	NA	NA	NA	57295168	57271915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_57274388_57294983
tx.6294	chr14	-	2395	2	FSM	ENSMUSG00000046352.8	ENSMUST00000055698.8	2406	2	-3	14	-3	-14	multi-exon	FALSE	canonical	3	13	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTAACGTGACCAATG	NA	False	NA	NA	False	NA	NA	NA	57342162	57336070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_57338229_57341925
tx.6295	chr14	-	1459	8	FSM	ENSMUSG00000021947.12	ENSMUST00000022517.9	1497	8	-3	41	-3	-41	multi-exon	TRUE	canonical	3	19	junction_7	4.40778532015472	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGCTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	57635989	57512490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600378_57600506_57620214_57620323_57635864
tx.6296	chr14	+	3079	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	9	0	-9	0	multi-exon	FALSE	canonical	3	32	junction_12	10.0195009855781	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	NA	False	NA	NA	NA	57661527	57755393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
tx.6297	chr14	+	1300	2	ISM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	362	-6	362	6	3prime_fragment	FALSE	canonical	3	29	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCACTGGTCTTAATTT	NA	False	NA	NA	False	NA	NA	NA	57762595	57780629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_57763057_57779790
tx.6298	chr14	-	812	4	ISM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	5484	-2	3844	1	3prime_fragment	FALSE	canonical	3	213	junction_3	22.6421435969889	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCATGAGGTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	57803542	57787052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378
tx.6299	chr14	-	843	5	FSM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	-5	-2	-5	1	multi-exon	FALSE	canonical	3	133	junction_4	52.3115665986023	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCATGAGGTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	57809031	57787052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
tx.63	chr1	-	4201	18	FSM	ENSMUSG00000025932.15	ENSMUST00000027066.13	4347	18	147	-1	-2	1	multi-exon	FALSE	canonical	3	31	junction_13	8.24998689314257	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGATGTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	14380277	14239176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
tx.630	chr1	-	6008	17	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	14045	-2061	14045	-1	3prime_fragment	FALSE	canonical	3	454	junction_10	63.2245193239933	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGTGATGGGACTCA	NA	False	NA	NA	False	NA	NA	NA	93354469	93333662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988
tx.6300	chr14	-	3941	24	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	10	61	combination_of_known_junctions	FALSE	canonical	2	67	junction_22	80.9376057852328	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGAGTCTTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	57902682	57819666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
tx.6301	chr14	-	3523	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	440	4717	-1	33	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAAAGTGCACTGAATT	NA	False	NA	NA	False	NA	NA	NA	57902447	57819694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
tx.6302	chr14	-	2727	4	FSM	ENSMUSG00000021952.17	ENSMUST00000172539.8	707	4	-22	-1998	3	1998	multi-exon	FALSE	canonical	3	7	junction_1	139.907906217705	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCTAGTTCTTGCCA	NA	False	NA	NA	False	NA	NA	NA	57902443	57877237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_57879618_57880538_57880681_57885875_57885982_57902344
tx.6303	chr14	-	5196	8	FSM	ENSMUSG00000021959.17	ENSMUST00000022531.14	5191	8	-5	0	-5	0	multi-exon	FALSE	canonical	2	5	junction_5	7.14856914468389	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTCATTTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	57983585	57927118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_57929228_57931770_57931878_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
tx.6304	chr14	-	173	2	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTAAAAAATAATAAAT	NA	False	NA	NA	False	NA	NA	NA	58014814	58007534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr14_-_58007544_58014650
tx.6305	chr14	+	781	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	35	4309	-3	2	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCAGGTGTAAAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	58035671	58039786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
tx.6306	chr14	-	2181	9	NNC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	72.2253418129676	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTTGCCAACTCTGA	NA	False	NA	NA	False	NA	NA	NA	58063626	58044014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_58044989_58045431_58045536_58047399_58047513_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
tx.6307	chr14	-	2269	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	-7	-2	-7	2	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATGTTGCCAACTCTG	NA	False	NA	NA	False	NA	NA	NA	58063627	58044015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
tx.6308	chr14	-	6702	2	ISM	ENSMUSG00000021965.4	ENSMUST00000224108.2	518	3	-526	-3794	-526	2885	intron_retention	FALSE	canonical	3	253	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTTGGGTTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	58048277	58041132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_58044989_58045431
tx.6309	chr14	+	527	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	4	2346	4	2	multi-exon	FALSE	canonical	3	956	junction_1	0	195	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTCTCATACGGAATA	NA	False	NA	NA	False	NA	NA	NA	58063694	58064407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_58063780_58063965
tx.631	chr1	-	6227	28	FSM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	19	-1819	15	-3	multi-exon	FALSE	canonical	3	54	junction_27	104.811974833924	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAGTGTGATGGGACT	NA	False	NA	NA	False	NA	NA	NA	93373389	93333664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
tx.6310	chr14	-	3958	12	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-15	-74	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	65.9081504635099	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTGTTTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	58127748	58070233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_58073012_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
tx.6311	chr14	-	5035	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-1	-75	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTCTTGTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	58127734	58070234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
tx.6312	chr14	-	5131	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	-24	79	-24	-79	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATTGTCTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	58127757	58070238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
tx.6313	chr14	-	6754	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-24	-79	intron_retention	FALSE	canonical	3	200	junction_2	22.070510597096	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATTGTCTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	58127757	58070238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_58074104_58075047_58075125_58076546_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
tx.6314	chr14	-	5146	14	NIC	ENSMUSG00000021969.9	novel	2179	14	NA	NA	10	-75	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	76.5916707199199	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTCTTGTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	58127723	58070234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_58074104_58075047_58075125_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
tx.6315	chr14	-	1791	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-22	664	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	63.7296808576838	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127755	58072484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_58073012_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
tx.6316	chr14	-	2324	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	4	1	4	-1	multi-exon	FALSE	canonical	3	153	junction_3	66.5872943480589	226	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTCTCTCATCCATT	NA	False	NA	NA	False	NA	NA	NA	58236715	58153718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
tx.6317	chr14	-	923	9	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	4	7699	4	-14	5prime_fragment	FALSE	canonical	3	228	junction_1	35.692261065951	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTGTCAGTAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	58236715	58161416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
tx.6318	chr14	+	3649	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	90.3297906251319	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	59438650	59474714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_59438754_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
tx.6319	chr14	+	3898	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	5	0	-1	0	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	431	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	59438681	59474714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
tx.632	chr1	-	6280	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-52	3	-38	-3	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	805	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAGTGTGATGGGACT	NA	False	NA	NA	False	NA	NA	NA	93406575	93333664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
tx.6320	chr14	+	3895	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	78.7866666573425	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	59438681	59474714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
tx.6321	chr14	-	2449	9	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5086	-12	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	114.076728564594	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAACTTAATCCATGTT	NA	False	NA	NA	False	NA	NA	NA	59608005	59584867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_59586501_59586670_59586838_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
tx.6322	chr14	-	1509	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5085	0	intron_retention	FALSE	canonical	3	300	junction_3	34.2669260690571	92	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	59608004	59586180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
tx.6323	chr14	-	1340	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5086	0	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	39.5924235176378	111	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	59608005	59586180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
tx.6324	chr14	-	4066	23	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	2995	14	NA	NA	3	0	intron_retention	FALSE	canonical	2	9	junction_9	48.8120023175441	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGAGTTCACAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	59678330	59618281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59639782_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
tx.6325	chr14	-	2928	13	NIC	ENSMUSG00000071350.13	novel	2995	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	30.6467326516584	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTGATTATTAT	NA	False	NA	NA	False	NA	NA	NA	59678332	59639457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
tx.6326	chr14	-	2993	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	2	0	2	0	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTGATTATTAT	NA	False	NA	NA	False	NA	NA	NA	59678331	59639457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
tx.6327	chr14	+	3049	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	-11	-1	-2	1	multi-exon	FALSE	canonical	3	224	junction_1	43.2892596379287	227	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTCATTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	59678418	59786353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
tx.6328	chr14	-	2235	10	FSM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	-1	-32	-1	32	multi-exon	FALSE	canonical	3	30	junction_1	34.1362556619393	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	59835394	59801392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
tx.6329	chr14	-	2507	5	FSM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	1	71	-1	-71	multi-exon	FALSE	canonical	3	110	junction_3	7.29297607290741	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTCCACTTGCTATTC	NA	False	NA	NA	False	NA	NA	NA	59835394	59822092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
tx.633	chr1	-	5137	21	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	15410	-1820	10516	-2	3prime_fragment	FALSE	canonical	3	454	junction_10	59.1515849322738	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTGATGGGACTC	NA	False	NA	NA	False	NA	NA	NA	93357998	93333663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819
tx.6330	chr14	+	3118	2	FSM	ENSMUSG00000044461.7	ENSMUST00000053949.7	3119	2	1	0	1	0	multi-exon	TRUE	canonical	3	42	junction_1	0	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCGGGGAATGCTTATT	NA	False	NA	NA	False	NA	NA	NA	59862757	59869109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_59863850_59867083
tx.6331	chr14	-	5255	14	FSM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	26	-2345	-13	6	multi-exon	FALSE	canonical	3	173	junction_1	24.6028814399438	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTCTCAGCAGTTGTA	NA	False	NA	NA	False	NA	NA	NA	60488868	60455520	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
tx.6332	chr14	-	3837	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	78	-2	16	2	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGGTCTCAGCAGT	NA	False	NA	NA	False	NA	NA	NA	60488878	60455524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
tx.6333	chr14	-	3809	15	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	59.493954417612	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGGTCTCAGCAGT	NA	False	NA	NA	False	NA	NA	NA	60488901	60455524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_60457608_60459031_60459128_60460816_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
tx.6334	chr14	-	6286	12	ISM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	23	3558	-16	13	5prime_fragment	FALSE	canonical	3	198	junction_5	17.8552490140959	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCTTGTTTTTTATCT	NA	False	NA	NA	False	NA	NA	NA	60488871	60461423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
tx.6335	chr14	+	3822	14	FSM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	-8	-1	-8	1	multi-exon	FALSE	canonical	3	64	junction_3	13.0256915000032	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTGTTTTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	60502668	60539820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
tx.6336	chr14	+	7810	14	NIC	ENSMUSG00000021990.17	novel	7517	13	NA	NA	-49	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.61064077809553	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTCTAGTGATGCATC	NA	False	NA	NA	False	NA	NA	NA	60872128	61002000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_60872314_60873816_60874096_60928302_60929998_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
tx.6337	chr14	+	7533	13	FSM	ENSMUSG00000021990.17	ENSMUST00000022566.14	7517	13	-24	8	-24	-1	multi-exon	FALSE	canonical	2	7	junction_3	4.19242040936842	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGGTTCTAGTGATGC	NA	False	NA	NA	False	NA	NA	NA	60872153	61001997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_60872314_60928302_60929998_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
tx.6338	chr14	+	5848	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	4.14010819517662	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGTTCTAGTGATGCA	NA	False	NA	NA	False	NA	NA	NA	60940402	61001998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_60940572_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
tx.6339	chr14	+	2394	19	FSM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	3	618	3	-618	multi-exon	FALSE	canonical	3	187	junction_10	24.3726850752595	288	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTGTCTCACCTGCTTG	NA	False	NA	NA	False	NA	NA	NA	61022024	61141060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
tx.634	chr1	+	3346	14	NIC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	343.313233551171	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	93406727	93437455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_93406791_93407185_93407322_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
tx.6340	chr14	-	3540	6	NNC	ENSMUSG00000060548.14	novel	1087	6	NA	NA	-6324	26	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	25.9615099714943	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	61219658	61201297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61219532
tx.6341	chr14	-	4020	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111236.4	3958	10	-36	-26	-36	26	multi-exon	FALSE	canonical	3	37	junction_9	15.475986974649	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	61275435	61201297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
tx.6342	chr14	-	4337	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111234.10	4051	10	-99	-187	-78	26	multi-exon	FALSE	canonical	3	46	junction_9	13.3813948598441	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	61284017	61201297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
tx.6343	chr14	-	848	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	-5	9249	-5	-1226	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGTGTGACTTAGTAG	NA	False	NA	NA	False	NA	NA	NA	61597893	61578439	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
tx.6344	chr14	-	4270	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-201	0	-201	0	multi-exon	TRUE	canonical	2	379	junction_16	73.5790391347971	1438	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTGAAAGACTTATT	6345	False	NA	NA	False	NA	NA	NA	61677524	61602659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
tx.6345	chr14	-	4269	17	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-195	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	150.394156614378	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACATTGAAAGACTTAT	6351	False	NA	NA	False	NA	NA	NA	61677518	61602660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677165
tx.6346	chr14	-	1998	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	116	1888	-12	424	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATTTTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	61794219	61771329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
tx.6347	chr14	-	2082	6	NNC	ENSMUSG00000021930.15	novel	4002	5	NA	NA	-13	426	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	67.8751795577735	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATTTTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	61794220	61771327	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61792219_61792301_61793969
tx.6348	chr14	+	1427	2	Genic_Genomic	ENSMUSG00000114902.2	novel	864	1	NA	NA	-1758	156	multi-exon	FALSE	canonical	2	2	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGCTTAGAAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	61794488	61797266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr14_+_61794890_61796240
tx.6349	chr14	+	1579	3	FSM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	-29	0	-29	0	multi-exon	FALSE	canonical	3	148	junction_1	49	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	61836959	61843395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_61837020_61837242_61837345_61841978
tx.635	chr1	+	3210	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	42	527	13	-527	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	1523	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	93406727	93437455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
tx.6350	chr14	+	1521	2	ISM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	252	0	252	0	3prime_fragment	FALSE	canonical	3	246	junction_1	0	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	61837240	61843395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_61837345_61841978
tx.6351	chr14	-	1370	2	FSM	ENSMUSG00000048281.10	ENSMUST00000063169.10	1314	2	-54	-2	30	2	multi-exon	FALSE	canonical	3	18	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCTAGCTTCTCTTACTG	613	False	NA	NA	False	NA	NA	NA	62530466	62513677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_62514558_62529976
tx.6352	chr14	+	2790	10	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	25	486	25	-486	intron_retention	TRUE	canonical	3	538	junction_2	119.060623628324	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTTGCCTCTTGCCTA	NA	False	NA	NA	False	NA	NA	NA	62569541	62609955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920
tx.6353	chr14	+	1370	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	25	99	25	-99	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATCAATAAAA	NA	False	NA	NA	False	NA	NA	NA	62569541	62610342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
tx.6354	chr14	+	1261	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	26	-99	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATCAATAAAA	NA	False	NA	NA	False	NA	NA	NA	62569542	62610342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
tx.6355	chr14	+	5113	9	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	-23	4	intron_retention	FALSE	canonical	3	753	junction_1	49.7160688309122	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATAGTTTTGTTGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	62569550	62610445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_62569626_62584016_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
tx.6356	chr14	-	5302	13	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	-5401	-4519	at_least_one_novel_splicesite	FALSE	canonical	3	358	junction_3	53.3611255711705	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTAGGTCCACCTTGG	NA	False	NA	NA	False	NA	NA	NA	62951869	62927771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741
tx.6357	chr14	-	4937	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-6198	intron_retention	FALSE	canonical	3	18	junction_14	145.868239208803	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACGTCTTCACAATTTC	NA	False	NA	NA	False	NA	NA	NA	62998587	62929450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
tx.6358	chr14	-	3682	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7199	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	309	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTTTAGGAAATAATCA	NA	False	NA	NA	False	NA	NA	NA	62998586	62930451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
tx.6359	chr14	-	3711	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7200	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	663	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGTTTAGGAAATAATC	NA	False	NA	NA	False	NA	NA	NA	62998586	62930452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
tx.636	chr1	+	3932	27	FSM	ENSMUSG00000034066.14	ENSMUST00000120301.8	3937	27	2	3	2	-3	multi-exon	FALSE	canonical	0	0	junction_19	3.25017068281892	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACTCAGGAAGTTCAAT	NA	False	NA	NA	False	NA	NA	NA	93439802	93549695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_93439907_93456290_93456502_93487957_93488063_93488865_93488909_93491030_93491110_93495138_93495237_93496802_93496918_93497594_93497743_93502092_93502189_93504091_93504256_93504544_93504614_93505369_93505428_93507461_93507721_93527644_93527824_93531099_93531190_93531931_93532066_93533063_93533146_93535154_93535393_93537697_93537829_93540113_93540183_93540839_93540930_93545273_93545357_93546224_93546344_93546614_93546773_93547875_93547984_93548214_93548367_93548945
tx.6360	chr14	+	6622	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	22	2	-14	-2	multi-exon	FALSE	canonical	3	23	junction_9	5.80111132128866	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCAGTTGTATCCTTGT	NA	False	NA	NA	False	NA	NA	NA	63075148	63198956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
tx.6361	chr14	+	1946	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	28	2769	-24	1291	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	7003	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTGCAGTTTCAAGG	NA	False	NA	NA	False	NA	NA	NA	63359938	63380603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
tx.6362	chr14	-	1845	7	FSM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	-50	1253	-50	-1250	multi-exon	FALSE	canonical	3	727	junction_5	64.1242283904194	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTTGTCTTTCTCAT	2832	False	NA	NA	False	NA	NA	NA	63402424	63383851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980
tx.6363	chr14	-	1674	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-64	1250	-60	-1250	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	829	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTTGTCTTTCTCAT	4247	False	NA	NA	False	NA	NA	NA	63415306	63383851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
tx.6364	chr14	-	3425	7	FSM	ENSMUSG00000021944.16	ENSMUST00000118022.8	3374	7	-45	-6	-22	6	multi-exon	FALSE	canonical	2	8	junction_5	3.67045259092421	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTTTTCTAACGGGCC	NA	False	NA	NA	False	NA	NA	NA	63482742	63436364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442205_63477984_63479095_63482599
tx.6365	chr14	-	3415	7	FSM	ENSMUSG00000021944.16	ENSMUST00000067417.10	3400	7	-15	0	-15	0	multi-exon	FALSE	canonical	2	7	junction_5	3.90156663690654	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCGAAGTCTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	63482735	63436370	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442208_63477984_63479095_63482599
tx.6366	chr14	+	4147	4	FSM	ENSMUSG00000035095.12	ENSMUST00000121288.2	4231	4	81	3	66	-3	multi-exon	FALSE	canonical	2	3	junction_1	2.16024689946929	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGATATCCAAATAGAGAC	NA	False	NA	NA	False	NA	NA	NA	63673923	63702944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_63674082_63679361_63679463_63689319_63690089_63699825
tx.6367	chr14	-	1649	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	230	2	-106	-2	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	2878	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	NA	False	NA	NA	NA	63746311	63729797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
tx.6368	chr14	-	5436	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	22	-2888	22	-938	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTCATAATCTACTG	NA	False	NA	NA	False	NA	NA	NA	63781409	63758037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
tx.6369	chr14	-	4524	6	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	9437	-2887	-6386	-939	3prime_fragment	FALSE	canonical	3	201	junction_4	7.44043009509531	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTCATAATCTACT	NA	False	NA	NA	False	NA	NA	NA	63771994	63758038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775
tx.637	chr1	-	2056	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	44	2149	44	2	multi-exon	FALSE	canonical	3	133	junction_7	20.1461601451751	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTACAGAGCCTGGCCA	NA	False	NA	NA	False	NA	NA	NA	93563400	93549621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
tx.6370	chr14	+	4869	3	FSM	ENSMUSG00000035067.10	ENSMUST00000176510.2	4315	3	-559	5	-387	-5	multi-exon	FALSE	canonical	2	12	junction_1	1.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACACTTGAAATTTTTT	8467	False	NA	NA	False	NA	NA	NA	63843564	63903626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_63844734_63898268_63898376_63900033
tx.6371	chr14	+	3902	3	FSM	ENSMUSG00000035067.10	ENSMUST00000119973.3	2963	3	-136	-803	-136	803	multi-exon	FALSE	canonical	0	0	junction_1	1	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAAAAAAGAAA	8718	False	NA	NA	False	NA	NA	NA	63843815	64059061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_63844734_64035655_64035853_64056274
tx.6372	chr14	+	1352	7	FSM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	-59	2	-59	-2	multi-exon	FALSE	canonical	3	56	junction_4	11.9443152447793	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTGAGCCTTTCACAT	4028	False	NA	NA	False	NA	NA	NA	64097753	64157302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
tx.6373	chr14	+	3427	2	FSM	ENSMUSG00000063060.7	ENSMUST00000079652.7	3299	2	-124	-4	-124	4	multi-exon	FALSE	canonical	2	2	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATCCTTTGAAATAGTA	4559	False	NA	NA	False	NA	NA	NA	64180997	64188185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_64181443_64185203
tx.6374	chr14	-	1340	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14986	-2	0	2	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCCTGCTGTGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	64678366	64360071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
tx.6375	chr14	+	8926	39	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	4	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	16.9090773700674	20	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCGAGGTCAAGCATAAC	NA	False	NA	NA	False	NA	NA	NA	64889983	65047067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
tx.6376	chr14	+	8857	38	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.4292315516919	22	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCGAGGTCAAGCATAAC	NA	False	NA	NA	False	NA	NA	NA	64889989	65047067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65040422_65041180_65043479
tx.6377	chr14	+	4314	2	ISM	ENSMUSG00000060012.10	ENSMUST00000224503.2	8865	40	150402	0	15001	0	3prime_fragment	FALSE	canonical	3	81	junction_1	0	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCGAGGTCAAGCATAA	NA	False	NA	NA	False	NA	NA	NA	65040452	65047066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_65041180_65043479
tx.6378	chr14	-	3416	11	FSM	ENSMUSG00000021972.15	ENSMUST00000022544.14	3396	11	-20	0	1	0	multi-exon	FALSE	canonical	3	23	junction_3	9.87167665596883	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTCCGGGATTTCT	7665	False	NA	NA	False	NA	NA	NA	65187319	65049048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_65050869_65054465_65054586_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
tx.6379	chr14	-	3402	11	NIC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	11.4873843846195	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGGCTGTCCGGGATTT	7674	False	NA	NA	False	NA	NA	NA	65187310	65049050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_65050869_65054465_65054586_65063049_65063142_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
tx.638	chr1	-	2867	11	FSM	ENSMUSG00000026277.15	ENSMUST00000151068.8	2821	11	-36	-10	-36	10	multi-exon	TRUE	canonical	3	161	junction_5	14.8354305633507	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCTGGCCAGACAGGAT	NA	False	NA	NA	False	NA	NA	NA	93563387	93549613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
tx.6380	chr14	+	2416	17	FSM	ENSMUSG00000021975.10	ENSMUST00000239450.2	2677	17	260	1	3	-1	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	268	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTTCTATTGCACTAC	NA	False	NA	NA	False	NA	NA	NA	65187753	65277283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
tx.6381	chr14	-	5250	5	ISM	ENSMUSG00000021978.10	ENSMUST00000225633.2	6013	7	20434	0	20434	0	3prime_fragment	FALSE	canonical	3	155	junction_1	9.54921462739214	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	65315120	65289511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032
tx.6382	chr14	-	5888	7	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	52.5346446536844	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTGGAGGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	65335543	65289510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313107_65315639_65317828_65317925_65335445
tx.6383	chr14	-	5875	6	NIC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	51.808879547815	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	65335552	65289511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65335445
tx.6384	chr14	-	5972	7	FSM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	2	3	1	0	multi-exon	FALSE	canonical	3	124	junction_6	16.5797734872612	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	65335553	65289511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
tx.6385	chr14	-	5840	6	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-29	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	62.4864785373604	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGTTTGGAGGTGTT	NA	False	NA	NA	False	NA	NA	NA	65387333	65289514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65387258
tx.6386	chr14	-	5945	7	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	49.9355139710763	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	65387339	65289511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65387258
tx.6387	chr14	-	2844	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	4	9886	4	7384	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTTCTATGCAAGGTT	NA	False	NA	NA	False	NA	NA	NA	65499908	65439783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
tx.6388	chr14	-	1503	4	ISM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	32	42797	32	-25527	5prime_fragment	FALSE	canonical	3	18	junction_2	4.49691252107735	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGTGTGTTTTGTCGGC	NA	False	NA	NA	False	NA	NA	NA	65499880	65472694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_65473381_65477166_65477364_65490392_65490913_65499780
tx.6389	chr14	+	3425	8	FSM	ENSMUSG00000034532.10	ENSMUST00000224629.2	3781	8	37	319	0	-319	multi-exon	FALSE	canonical	2	16	junction_5	3.88087934491604	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTTTGCTGTTATTGT	2575	False	NA	NA	False	NA	NA	NA	65504103	65561101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_65504233_65508148_65508285_65524580_65524617_65531232_65531440_65532841_65533007_65536634_65536865_65540548_65540652_65558682
tx.639	chr1	+	1516	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	-48	0	-48	0	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGACTCTACTCTGCT	NA	False	NA	NA	False	NA	NA	NA	93613333	93623486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
tx.6390	chr14	+	4382	10	NIC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	16.9297750708808	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTGCCTCTCTAC	NA	False	NA	NA	False	NA	NA	NA	65595968	65636379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_65596205_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
tx.6391	chr14	+	4353	10	FSM	ENSMUSG00000034522.11	ENSMUST00000066994.7	4229	10	-124	0	18	0	multi-exon	FALSE	canonical	3	41	junction_1	17.4171761399877	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTGCCTCTCTAC	NA	False	NA	NA	False	NA	NA	NA	65596000	65636379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
tx.6392	chr14	-	2854	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	-3	0	-3	0	multi-exon	FALSE	canonical	3	390	junction_14	46.0192949772602	531	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3441	False	NA	NA	False	NA	NA	NA	65830527	65767897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
tx.6393	chr14	-	2802	15	FSM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	-31	0	-8	0	multi-exon	FALSE	canonical	3	153	junction_14	90.9467493893531	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3436	False	NA	NA	False	NA	NA	NA	65830532	65767897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
tx.6394	chr14	+	3793	9	FSM	ENSMUSG00000022032.15	ENSMUST00000022610.15	3794	9	0	1	0	-1	multi-exon	FALSE	canonical	3	27	junction_2	7.61474720525902	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCTGATAAGTGGTCC	818	False	NA	NA	False	NA	NA	NA	65903851	66002274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_65904196_65908005_65908124_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
tx.6395	chr14	+	3552	8	NIC	ENSMUSG00000022032.15	novel	3179	8	NA	NA	62	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	14.8172541453592	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGATAAGTGGTCCA	NA	False	NA	NA	False	NA	NA	NA	65913987	66002275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_65914208_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
tx.6396	chr14	+	1678	8	FSM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	41	1	41	-1	multi-exon	FALSE	canonical	3	729	junction_5	59.6342594316319	503	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGCATTATCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	66043326	66055270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
tx.6397	chr14	-	2845	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	72	-4	-14	4	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	1456	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTCAGTGGCTTGTGAG	6416	False	NA	NA	False	NA	NA	NA	66071371	66056482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
tx.6398	chr14	+	2171	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	59	0	1	0	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATTGATATCTGAATTC	NA	False	NA	NA	False	NA	NA	NA	66074809	66104056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
tx.6399	chr14	+	1711	9	FSM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	99	0	-60	0	multi-exon	TRUE	canonical	3	13	junction_1	2.72717802865893	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGGGTCTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	66206030	66218996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_66206138_66209180_66209302_66210773_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
tx.64	chr1	-	4044	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-75	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	10.8439704675792	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGATGTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	14380135	14239176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
tx.640	chr1	-	1577	5	ISM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	3995	3457	-831	-1	3prime_fragment	FALSE	canonical	3	370	junction_4	26.4988207284777	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACTGTGTAGACTGTAC	NA	False	NA	NA	False	NA	NA	NA	93678507	93633113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568
tx.6400	chr14	-	2286	12	FSM	ENSMUSG00000034450.9	ENSMUST00000059970.9	2263	12	-23	0	-23	0	multi-exon	FALSE	canonical	2	4	junction_5	1.97086212624353	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGCCCTTGAGGAAT	NA	False	NA	NA	False	NA	NA	NA	66246679	66224234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_66225144_66225630_66225722_66227827_66227993_66228478_66228629_66234272_66234350_66235008_66235117_66237282_66237469_66240039_66240131_66241530_66241626_66243285_66243412_66245487_66245590_66246493
tx.6401	chr14	-	2043	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	-5	-3	-5	0	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGTGTTCTTGAGA	NA	False	NA	NA	False	NA	NA	NA	66361954	66321822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
tx.6402	chr14	+	4454	5	ISM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	4849	6	4790	-6	3prime_fragment	FALSE	canonical	3	340	junction_3	9.54921462739214	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGTGAGTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	66539328	66548867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
tx.6403	chr14	+	3649	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	25	4	-10	-4	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	925	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGAGTTGTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	66534504	66548869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
tx.6404	chr14	+	4567	3	FSM	ENSMUSG00000046204.15	ENSMUST00000089236.11	5518	3	-15	966	-15	-966	multi-exon	FALSE	canonical	3	15	junction_1	6.5	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGAGTTGTTTTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	67148603	67157506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_67148743_67152770_67152900_67153207
tx.6405	chr14	-	3710	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	355	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	292.074647992598	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCTGTCCATATATCAT	NA	False	NA	NA	False	NA	NA	NA	67245950	67222690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67245285
tx.6406	chr14	-	3232	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	3	3	3	-3	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	766	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCTGTCCATATATCAT	NA	False	NA	NA	False	NA	NA	NA	67246323	67222690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
tx.6407	chr14	-	3399	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-8	619	-8	-1	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	857	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTTGAATTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	67309901	67252123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
tx.6408	chr14	-	3472	11	NIC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	281.93305943078	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAATTTGTATTTAA	NA	False	NA	NA	False	NA	NA	NA	67309901	67252121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67275386_67275458_67276323_67276422_67307683_67307759_67309538
tx.6409	chr14	-	6923	16	Fusion	ENSMUSG00000048922.19_ENSMUSG00000093726.2	novel	3841	15	NA	NA	-42	0	multi-exon	TRUE	canonical	0	0	junction_2	157.212156725306	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCCTGTGTCTGGGCCTT	NA	False	NA	NA	False	NA	NA	NA	67952866	67910625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_-_67915472_67917610_67917780_67931074_67931201_67931800_67931901_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
tx.641	chr1	-	2170	6	FSM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	-67	3455	17	0	multi-exon	FALSE	canonical	3	370	junction_4	24.3770383763081	510	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTAGACTGTACAT	NA	False	NA	NA	False	NA	NA	NA	93682569	93633111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
tx.6410	chr14	-	3863	3	ISM	ENSMUSG00000048922.19	ENSMUST00000131179.8	676	5	1083	-1441	1083	0	intron_retention	FALSE	canonical	0	0	junction_2	263	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTCCAGATTGTTCAAA	649	False	NA	NA	False	NA	NA	NA	67933100	67913803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_67915472_67917610_67917780_67931074
tx.6411	chr14	-	3437	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-29	-195	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	125.363145969407	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTAGAATGACTTATTCT	NA	False	NA	NA	False	NA	NA	NA	67952853	67913998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
tx.6412	chr14	-	3597	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	27	-20	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	137.085274369567	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATAACTGTGCAGTC	NA	False	NA	NA	False	NA	NA	NA	67953103	67913823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
tx.6413	chr14	-	3613	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTCCAGATTGTTCAAA	NA	False	NA	NA	False	NA	NA	NA	67953096	67913803	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
tx.6414	chr14	-	3634	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	205	2	-30	-2	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	411	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCTTCCAGATTGTTCA	NA	False	NA	NA	False	NA	NA	NA	67952854	67913805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
tx.6415	chr14	+	2904	11	FSM	ENSMUSG00000034327.18	ENSMUST00000078053.13	3157	11	103	150	50	-1	multi-exon	FALSE	canonical	3	27	junction_8	27.0325729445053	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	NA	False	NA	NA	NA	67953649	67979609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
tx.6416	chr14	+	3031	12	FSM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	-39	-1690	-39	-2	multi-exon	FALSE	canonical	3	52	junction_9	22.4881970879051	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCCTGTTTCTGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	67953671	67979608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
tx.6417	chr14	+	4658	3	ISM	ENSMUSG00000034327.18	ENSMUST00000156700.2	3098	12	18768	1	18768	-1	3prime_fragment	FALSE	canonical	3	84	junction_1	3	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	NA	False	NA	NA	NA	67972501	67979609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_67975161_67975825_67975960_67977744
tx.6418	chr14	-	5415	9	ISM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	163151	-2	-5322	2	3prime_fragment	FALSE	canonical	3	80	junction_2	10.4731800328267	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTTAGCTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	68007730	67989581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680
tx.6419	chr14	-	8570	39	ISM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	110763	1	-57710	-1	3prime_fragment	FALSE	canonical	3	67	junction_21	9.53561627999655	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTGTTTAGCTGGT	NA	False	NA	NA	False	NA	NA	NA	68060118	67989584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994
tx.642	chr1	-	3069	2	ISM	ENSMUSG00000026279.15	ENSMUST00000189173.2	2001	3	-198	23660	16	-23660	5prime_fragment	FALSE	canonical	3	388	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATCTGAAGATGGCTA	NA	False	NA	NA	False	NA	NA	NA	93682570	93676030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_93678708_93682178
tx.6420	chr14	-	4785	4	ISM	ENSMUSG00000044447.6	ENSMUST00000226033.2	1846	6	5759	-3471	5759	-13	3prime_fragment	FALSE	canonical	3	80	junction_2	7.11805216802087	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	67996649	67989596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479
tx.6421	chr14	-	6772	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-151	3367	-141	117	multi-exon	TRUE	canonical	3	67	junction_21	9.78869405661972	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCAATGCTTTGAGTTAG	NA	False	NA	NA	False	NA	NA	NA	68171032	67992950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
tx.6422	chr14	+	3361	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	0	19	0	-19	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	378	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCTAAATTCAAT	NA	False	NA	NA	False	NA	NA	NA	68321311	68326525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
tx.6423	chr14	-	3074	3	FSM	ENSMUSG00000022054.12	ENSMUST00000022638.6	3334	3	-2	262	-2	-262	multi-exon	FALSE	canonical	3	13	junction_2	6.5	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAATGTGTGGTGATGTG	NA	False	NA	NA	False	NA	NA	NA	68362297	68356993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_68358834_68360269_68360395_68361188
tx.6424	chr14	-	3055	2	ISM	ENSMUSG00000034248.8	ENSMUST00000184914.2	2212	4	35706	-195	35706	195	intron_retention	FALSE	canonical	3	206	junction_1	0	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTACAGTCCTCAGCAC	892	False	NA	NA	False	NA	NA	NA	69486710	69481429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_69482804_69485029
tx.6425	chr14	-	3575	3	FSM	ENSMUSG00000034248.8	ENSMUST00000184497.2	5927	3	37	2315	37	10	multi-exon	FALSE	canonical	3	50	junction_2	78	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTTTCATGGGGAAA	579	False	NA	NA	False	NA	NA	NA	69522524	69481614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_69482804_69485029_69487072_69522180
tx.6426	chr14	-	1805	4	FSM	ENSMUSG00000034248.8	ENSMUST00000037064.5	4174	4	42	2327	42	1	multi-exon	FALSE	canonical	3	26	junction_2	79.79974937304	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTCTCTTTTC	584	False	NA	NA	False	NA	NA	NA	69522519	69481623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_69482804_69485029_69485087_69486842_69487072_69522180
tx.6427	chr14	+	4702	12	NIC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-23	472	intron_retention	FALSE	canonical	3	160	junction_8	20.4692876167489	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGACATTTTAAACAGA	7278	False	NA	NA	False	NA	NA	NA	69574599	69604137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
tx.6428	chr14	+	3029	13	FSM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	-22	582	-22	472	multi-exon	FALSE	canonical	3	83	junction_8	35.9663229826026	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGACATTTTAAACAGA	NA	False	NA	NA	False	NA	NA	NA	69792850	69822387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812849_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
tx.6429	chr14	+	3004	13	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-22	471	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7096334974091	129	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTGACATTTTAAACAG	7279	False	NA	NA	False	NA	NA	NA	69574600	69604136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
tx.643	chr1	+	2934	13	NIC	ENSMUSG00000026280.18	novel	513	6	NA	NA	-13	-1184	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	90.4551761309926	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAAGTCTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	93679208	93717148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_93679304_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
tx.6430	chr14	+	3005	13	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-22	472	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7096334974091	110	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGACATTTTAAACAGA	7279	False	NA	NA	False	NA	NA	NA	69574600	69604137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
tx.6431	chr14	+	3029	13	FSM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	-22	582	-22	472	multi-exon	FALSE	canonical	3	83	junction_8	35.9663229826026	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGACATTTTAAACAGA	NA	False	NA	NA	False	NA	NA	NA	69792850	69822387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812849_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
tx.6432	chr14	-	2002	7	FSM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	-40	-4	20	3	multi-exon	FALSE	canonical	3	174	junction_3	17.7333646616265	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	NA	False	NA	NA	NA	69944982	69934752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502
tx.6433	chr14	-	1704	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	25	-3	-6	3	multi-exon	FALSE	canonical	3	88	junction_7	41.9007573844168	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	NA	False	NA	NA	NA	69945008	69934752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
tx.6434	chr14	-	2680	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-31	0	-24	0	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	502	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	NA	False	NA	NA	NA	69970014	69954448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
tx.6435	chr14	+	3170	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	6	3	6	-3	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGCAGTGTACGTGGCC	NA	False	NA	NA	False	NA	NA	NA	70004926	70021857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
tx.6436	chr14	-	3889	6	ISM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	8685	0	3871	0	3prime_fragment	FALSE	canonical	3	88	junction_5	16.3511467487758	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTCTTGTACTGTTT	NA	False	NA	NA	False	NA	NA	NA	70034400	70022438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722
tx.6437	chr14	-	5343	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	-23	2	-23	-2	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACAAGTCTTGTACTGT	NA	False	NA	NA	False	NA	NA	NA	70043108	70022440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
tx.6438	chr14	+	1520	9	FSM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	2	245	1	-245	multi-exon	FALSE	canonical	3	54	junction_3	8.98523093748847	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTGTACTTTAACTGA	NA	False	NA	NA	False	NA	NA	NA	70337555	70375410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
tx.6439	chr14	-	3625	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	100	0	100	0	multi-exon	TRUE	canonical	0	0	junction_8	38.4373191052654	246	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	NA	False	NA	NA	NA	70391160	70375616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
tx.644	chr1	+	2940	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	49	1184	-34	-1184	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	334	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAAGTCTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	93682675	93717148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
tx.6440	chr14	-	1969	7	FSM	ENSMUSG00000044551.14	ENSMUST00000153871.2	1983	7	13	1	13	-1	multi-exon	FALSE	canonical	2	3	junction_1	2.91070819942883	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGACTGTTAAATGAC	NA	False	NA	NA	False	NA	NA	NA	70396938	70391854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70392726_70393298_70393403_70393609_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
tx.6441	chr14	-	1980	10	ISM	ENSMUSG00000022091.7	ENSMUST00000227259.2	2481	21	12323	-464	12323	0	3prime_fragment	FALSE	canonical	3	14	junction_5	4.24554959434284	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCTGCTTCATTA	NA	False	NA	NA	False	NA	NA	NA	70429749	70417916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429534
tx.6442	chr14	-	2014	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	-12	-32	-12	-1	multi-exon	TRUE	canonical	2	11	junction_1	4.03827838412513	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTTGTCCTAATTTT	9174	False	NA	NA	False	NA	NA	NA	70526932	70455314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
tx.6443	chr14	-	2818	13	FSM	ENSMUSG00000022092.12	ENSMUST00000228265.2	2494	13	-43	-281	-22	281	multi-exon	FALSE	canonical	2	5	junction_1	4.93006648591635	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATGACCTGAGTTT	9164	False	NA	NA	False	NA	NA	NA	70526942	70460144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70461381_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
tx.6444	chr14	-	4850	9	NIC	ENSMUSG00000022094.16	novel	4926	10	NA	NA	-13	9	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	4	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCAAGTGTCGGCTTGCT	NA	False	NA	NA	False	NA	NA	NA	70588887	70540908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70551049_70551220_70553886_70554074_70556110_70556390_70588728
tx.6445	chr14	-	5216	23	FSM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	-11	-289	-11	289	multi-exon	FALSE	canonical	3	11	junction_22	14.3650747266008	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTGATTGATTGATT	NA	False	NA	NA	False	NA	NA	NA	70666554	70609636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666391
tx.6446	chr14	-	4862	23	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_14	9.98511288563344	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTCTGAGAGAATATT	NA	False	NA	NA	False	NA	NA	NA	70666868	70609925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
tx.6447	chr14	-	2036	9	FSM	ENSMUSG00000000776.14	ENSMUST00000000793.13	2016	9	-18	-2	-18	2	multi-exon	FALSE	canonical	3	137	junction_3	16.2244992218558	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAAGTGGTTCTGCTCA	1713	False	NA	NA	False	NA	NA	NA	70680905	70676194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
tx.6448	chr14	-	1996	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	77	-41	77	2	multi-exon	FALSE	canonical	3	137	junction_3	15.9910689359494	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAAGTGGTTCTGCTCA	1965	False	NA	NA	False	NA	NA	NA	70680653	70676194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
tx.6449	chr14	-	3760	20	FSM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	-76	0	-30	0	multi-exon	FALSE	canonical	1	1	junction_3	1.84885979686845	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTGCCAGATGCTGT	8917	False	NA	NA	False	NA	NA	NA	70757704	70711997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70712690_70715292_70715544_70716984_70717199_70717593_70717722_70723586_70723713_70727459_70727641_70727986_70728148_70728790_70728917_70729515_70729712_70729844_70729991_70730218_70730336_70732152_70732256_70742121_70742238_70742771_70742897_70744892_70744999_70745438_70745618_70745895_70746014_70746189_70746355_70749020_70749135_70757308
tx.645	chr1	+	2939	14	NNC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	1	-1189	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	119.519798562919	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGAAAACAAAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	93682710	93717143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712350_93712390_93712474_93712621_93713631_93713689_93714232_93714327_93715407
tx.6450	chr14	+	1611	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	-46	0	-46	0	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	182	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6521	False	NA	NA	False	NA	NA	NA	70782747	70786373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
tx.6451	chr14	+	2888	12	ISM	ENSMUSG00000022096.15	ENSMUST00000163060.2	5278	18	7580	-2	7580	2	3prime_fragment	FALSE	canonical	2	7	junction_11	3.66804381851491	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGTTCCGAGCATTT	NA	False	NA	NA	False	NA	NA	NA	70800919	70810986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_70801123_70802741_70802824_70803468_70803633_70803749_70803987_70804219_70804386_70804588_70804659_70804941_70805073_70805215_70805336_70805416_70805533_70808817_70808983_70809347_70809477_70809681
tx.6452	chr14	+	1454	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	188	2284	-22	6	multi-exon	FALSE	canonical	3	39	junction_1	3	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCCTAAATGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	70815264	70817727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_70815551_70816351_70816566_70816773
tx.6453	chr14	-	3859	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8496142792766	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGACTCTCCCCAGTC	NA	False	NA	NA	False	NA	NA	NA	70837294	70820734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_70821059_70821252_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
tx.6455	chr14	-	2751	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	45	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	NA	False	NA	NA	NA	70864496	70841109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
tx.6456	chr14	-	1725	5	FSM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	-36	0	-36	0	multi-exon	FALSE	canonical	3	21	junction_3	15.3195136998535	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	70879744	70873642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70874464_70875906_70876014_70876241_70876420_70878971_70879009_70879162
tx.6457	chr14	-	1670	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	-28	-306	-14	0	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	70879722	70873642	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
tx.6458	chr14	+	1718	5	NIC	ENSMUSG00000022102.14	novel	404	3	NA	NA	-37	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	2.38484800354236	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTGTGGCCTGTAATG	NA	False	NA	NA	False	NA	NA	NA	71010674	71015934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_71010805_71012905_71013188_71013423_71013512_71014255_71014438_71014898
tx.6459	chr14	-	5765	24	FSM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	-83	-1582	-83	-2	multi-exon	FALSE	canonical	3	32	junction_23	34.1903931941048	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	7062	False	NA	NA	False	NA	NA	NA	72840485	72775387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
tx.646	chr1	-	968	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	30	5	2	-5	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	486	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACGAGCTTTGGTTCTG	2340	False	NA	NA	False	NA	NA	NA	93729626	93720302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
tx.6460	chr14	-	6146	26	FSM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	-5	2	-5	-2	multi-exon	FALSE	canonical	3	104	junction_25	24.1979833870511	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	NA	False	NA	NA	NA	72947448	72775387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
tx.6461	chr14	-	5999	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-698	-2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_25	35.8196817406297	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	NA	False	NA	NA	NA	72948141	72775387	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947997
tx.6462	chr14	+	2168	15	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	-26	7	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	6.89720440261332	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGACGAACAACTTCT	NA	False	NA	NA	False	NA	NA	NA	73380405	73420129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
tx.6463	chr14	-	4792	27	FSM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	-139	3	-139	-3	multi-exon	FALSE	canonical	3	21	junction_3	9.67129896490844	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTGTGATATGATCT	NA	False	NA	NA	False	NA	NA	NA	73563401	73432944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
tx.6464	chr14	-	1788	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	-1	9	-1	-9	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	432	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAGATTTCTTGTGGA	NA	False	NA	NA	False	NA	NA	NA	73622730	73599674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
tx.6465	chr14	+	1333	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	0	-5	0	5	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTCAATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	73747464	73755990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
tx.6466	chr14	+	2306	6	NIC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	-4	5	intron_retention	FALSE	canonical	3	317	junction_5	16.1170716943246	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTCAATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	73747460	73755990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
tx.6467	chr14	+	4520	5	NIC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	651	0	intron_retention	FALSE	canonical	3	317	junction_4	18.0138835346518	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCACAATTAAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	73748128	73756289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
tx.6468	chr14	-	3170	3	ISM	ENSMUSG00000033405.5	ENSMUST00000043813.3	3579	5	23003	5	-28	-5	3prime_fragment	FALSE	canonical	2	19	junction_1	0.5	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGATCTCAGAGACTT	NA	False	NA	NA	False	NA	NA	NA	73762679	73756321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_73759115_73760737_73760935_73762499
tx.6469	chr14	+	1919	10	NIC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	22	-6	intron_retention	FALSE	canonical	3	74	junction_1	503.772435397836	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTAATTTGGAGTTATG	NA	False	NA	NA	False	NA	NA	NA	73790227	73833576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
tx.647	chr1	-	4057	3	FSM	ENSMUSG00000026281.16	ENSMUST00000112893.2	1040	3	-2875	-142	30	-6	multi-exon	FALSE	canonical	3	1366	junction_2	100	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACGAGCTTTGGTTCT	2368	False	NA	NA	False	NA	NA	NA	93729598	93720303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93720666_93722447_93722646_93726101
tx.6470	chr14	+	1756	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	119	354	18	5	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	866	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATTCTTTAGTATAAA	NA	False	NA	NA	False	NA	NA	NA	73790223	73833228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
tx.6471	chr14	-	1698	2	Genic_Genomic	ENSMUSG00000057886.6	novel	552	1	NA	NA	-74	1106	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCCTCCCAGAAATGGT	NA	False	NA	NA	False	NA	NA	NA	74193065	74191333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr14_-_74192826_74192859
tx.6472	chr14	+	1063	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	14	911	-8	6	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTATTTTACCACC	NA	False	NA	NA	False	NA	NA	NA	74969750	74987294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
tx.6473	chr14	+	1136	9	FSM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	-9	-10	-9	10	multi-exon	FALSE	canonical	3	49	junction_1	425.971756692859	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTTACCACCATTC	NA	False	NA	NA	False	NA	NA	NA	74969814	74987298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_74969962_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
tx.6474	chr14	-	4702	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	-11	3	-1	-3	multi-exon	FALSE	canonical	3	34	junction_4	23.7891243570067	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCTTTGGATTGATTG	568	False	NA	NA	False	NA	NA	NA	75185317	74992117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
tx.6475	chr14	-	4620	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	1	-1496	1	-2	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCTTTGGATTGATTGA	570	False	NA	NA	False	NA	NA	NA	75185315	74992116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
tx.6478	chr14	+	3518	16	ISM	ENSMUSG00000021998.17	ENSMUST00000145303.8	3841	17	40493	2	617	-2	3prime_fragment	TRUE	canonical	2	7	junction_1	5.24679796532027	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGCATATGCTTAAA	NA	False	NA	NA	False	NA	NA	NA	75414264	75468280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_75414374_75435516_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
tx.6479	chr14	+	3561	15	ISM	ENSMUSG00000021998.17	ENSMUST00000131802.2	3594	16	7596	-24	25	-2	3prime_fragment	FALSE	canonical	2	7	junction_11	4.86396579606663	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGCATATGCTTAAA	NA	False	NA	NA	False	NA	NA	NA	75435364	75468280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
tx.648	chr1	-	3299	4	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	2	-5	intron_retention	FALSE	canonical	3	1366	junction_2	499.33845124213	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACGAGCTTTGGTTCTG	2340	False	NA	NA	False	NA	NA	NA	93729626	93720302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_93720666_93722447_93722646_93726101_93728633_93729419
tx.6480	chr14	+	6187	19	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	26.5676402070797	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTAGATTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	75521780	75581867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
tx.6481	chr14	+	6183	19	FSM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	-38	-1	-25	1	multi-exon	FALSE	canonical	3	74	junction_1	25.8044043517888	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTAGATTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	75521787	75581867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
tx.6482	chr14	+	3631	8	ISM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	43288	-1	-10398	1	3prime_fragment	FALSE	canonical	3	83	junction_4	24.9440189551053	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTAGATTTTCCTTG	NA	False	NA	-95	True	NA	NA	NA	75565113	75581867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
tx.6483	chr14	+	3055	6	ISM	ENSMUSG00000022000.12	ENSMUST00000022577.6	6151	19	45696	-3	-8003	3	3prime_fragment	FALSE	canonical	3	74	junction_2	30.4538995860957	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTAGATTTTCCTTGCT	NA	False	NA	NA	False	NA	NA	NA	75567508	75581869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
tx.6484	chr14	-	4277	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	9	-18	9	-2	multi-exon	FALSE	canonical	3	97	junction_8	10.1293289898751	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGCCACGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	75991989	75939791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
tx.6485	chr14	-	4246	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	22.2812599611096	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	75991988	75939790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
tx.6486	chr14	-	3584	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	5	-1	5	1	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTTACAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	76024472	75997555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
tx.6487	chr14	+	874	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	178	117	-31	1	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	1054	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGAACTCTTTGCTGTG	1016	False	NA	NA	False	NA	NA	NA	76082710	76085738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
tx.6488	chr14	-	1523	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-51	-5	-51	5	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	321	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAACTGTTATCACTGG	NA	False	NA	NA	False	NA	NA	NA	76248356	76134371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
tx.6489	chr14	-	5454	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-64	-1	-64	1	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGAATCTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	76348264	76323674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
tx.649	chr1	-	2992	5	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	3	119	junction_3	852.002494127805	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCACGAGCTTTGGTTC	2340	False	NA	NA	False	NA	NA	NA	93729626	93720304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_93720666_93722447_93722646_93726101_93726193_93726497_93728633_93729419
tx.6490	chr14	+	1672	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	10	2292	10	-2292	multi-exon	FALSE	canonical	3	441	junction_7	36.4295362461713	372	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGTGTCTGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	76348340	76372527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
tx.6491	chr14	+	1722	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	37	3	-15	0	multi-exon	FALSE	canonical	3	2255	junction_1	40	1729	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	6576	False	NA	NA	False	NA	NA	NA	76741954	76745202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_76742282_76742688_76742738_76743856
tx.6492	chr14	-	636	2	ISM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	16752	-4	16386	2	3prime_fragment	FALSE	canonical	3	106	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTGCGAGTTACCGA	NA	False	NA	NA	False	NA	NA	NA	76777546	76770251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_76770687_76777345
tx.6493	chr14	-	7528	4	NIC	ENSMUSG00000052584.11	novel	865	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	14	junction_1	8.04155872120988	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	False	NA	NA	False	NA	NA	NA	76794300	76770253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_76777495_76787421_76787495_76793870_76793989_76794204
tx.6494	chr14	+	874	3	ISM	ENSMUSG00000101009.7	ENSMUST00000191447.2	660	4	383	-124	383	124	3prime_fragment	FALSE	canonical	0	0	junction_2	1	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACCCAGAGTGTACT	NA	False	NA	NA	False	NA	NA	NA	76915476	76917952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_76915820_76916894_76917039_76917565
tx.6495	chr14	+	622	2	NIC	ENSMUSG00000101009.7	novel	1412	4	NA	NA	378	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGCCTTCACGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	76915471	76924547	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_76915820_76924273
tx.6496	chr14	-	2484	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	-42	2	-42	-2	multi-exon	FALSE	canonical	3	38	junction_3	13.9737362978714	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	NA	False	NA	NA	NA	77274123	77261641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
tx.6497	chr14	-	2527	7	NIC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	20.3258182833776	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTATCCATTCCTT	NA	False	NA	NA	False	NA	NA	NA	77274344	77261640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273936
tx.6498	chr14	-	660	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	1	5532	1	2	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGATGCTTTTCCACATC	NA	False	NA	NA	False	NA	NA	NA	78112365	78063652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
tx.6499	chr14	-	7546	6	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-3149	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	9.98799279134702	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTTTTCCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	78750713	78729685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319
tx.65	chr1	-	3999	17	FSM	ENSMUSG00000025932.15	ENSMUST00000190337.7	2199	17	-111	-1689	-53	0	multi-exon	FALSE	canonical	3	31	junction_13	8.4483726243579	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCCTTGGATGTCAGTA	NA	False	NA	NA	False	NA	NA	NA	14374905	14239177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648
tx.650	chr1	-	2526	4	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	1255	-7	combination_of_known_junctions	FALSE	canonical	3	119	junction_3	640.209861425663	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCACGAGCTTTGGTTC	3593	False	NA	NA	False	NA	NA	NA	93728373	93720304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_93720666_93722447_93722646_93726101_93726193_93726497
tx.6500	chr14	-	9373	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	22.3366429848962	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTTTTCCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	78774278	78729685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319_78751761_78752246_78752512_78753786_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
tx.6501	chr14	-	9414	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-51	-4	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	12.2271882389781	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCATGGTTTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	78774299	78729689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
tx.6502	chr14	+	3469	26	FSM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	-61	-2	1	2	multi-exon	FALSE	canonical	2	39	junction_16	9.45524193238862	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTCCGTCCTTTTGTT	9347	False	NA	NA	False	NA	NA	NA	79086632	79302710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
tx.6503	chr14	+	6918	45	FSM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	131	5	-9	-5	multi-exon	FALSE	canonical	2	24	junction_28	13.7905487757808	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATGAGTATGTGTGTGT	9337	False	NA	NA	False	NA	NA	NA	79086622	79439745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
tx.6504	chr14	+	5752	34	ISM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	118	104261	-22	32781	5prime_fragment	FALSE	canonical	2	24	junction_28	14.2462277319776	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTTTCTTACCCTAAT	9324	False	NA	NA	False	NA	NA	NA	79086609	79335489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824
tx.6505	chr14	-	912	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	11	-5	11	5	multi-exon	FALSE	canonical	3	129	junction_2	11.7046999107196	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAAAGCTGCCTTATT	NA	False	NA	NA	False	NA	NA	NA	79539074	79526190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
tx.6506	chr14	-	3884	20	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	16	-304	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	48.9853276693114	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTGTTTATATCTTT	NA	False	NA	NA	False	NA	NA	NA	79628202	79571947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614878_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
tx.6507	chr14	-	4110	21	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	14	-306	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	55.2484388919723	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTTTATATCT	NA	False	NA	NA	False	NA	NA	NA	79628204	79571949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
tx.6508	chr14	-	3909	19	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	2	-304	combination_of_known_splicesites	FALSE	canonical	3	9	junction_10	49.6017472810518	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTGTTTATATCTTT	NA	False	NA	NA	False	NA	NA	NA	79628216	79571947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
tx.6509	chr14	-	3967	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	16	9240	16	-305	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTTGTTTATATCTT	NA	False	NA	NA	False	NA	NA	NA	79628202	79571948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
tx.651	chr1	-	622	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	2	431	2	-431	multi-exon	FALSE	canonical	3	2511	junction_1	0	225	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTTTGGTTTTGTT	2340	False	NA	NA	False	NA	NA	NA	93729626	93728217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_93728633_93729419
tx.6510	chr14	-	3187	14	NIC	ENSMUSG00000022020.16	novel	2154	16	NA	NA	40	-8329	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	42.6480019579572	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAGAAATCAACACC	NA	False	NA	NA	False	NA	NA	NA	79628178	79586745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
tx.6511	chr14	+	1798	11	FSM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	5	-4	5	4	multi-exon	FALSE	canonical	3	73	junction_10	10.5683489722851	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCCTACAGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	79635216	79661031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_79635477_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650426_79650545_79653317_79653455_79656627_79656727_79660836
tx.6512	chr14	-	2290	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	418	996	-140	17	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGGGGTCTCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	79718542	79698372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
tx.6513	chr14	-	4844	8	NIC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	-12	17	intron_retention	FALSE	canonical	3	326	junction_1	17.7350109175297	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGGGGTCTCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	79718972	79698372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
tx.6514	chr14	+	4239	9	FSM	ENSMUSG00000036461.17	ENSMUST00000040131.13	4235	9	-22	18	-22	-18	multi-exon	FALSE	canonical	3	19	junction_5	6.51440711039769	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTTCAAGCAAATA	NA	False	NA	NA	False	NA	NA	NA	79718611	79819916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_79719078_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
tx.6515	chr14	+	3604	8	NNC	ENSMUSG00000036461.17	novel	4235	9	NA	NA	44555	-20	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.507528884819	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGTTTTCAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	79797692	79819914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_79797826_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
tx.6516	chr14	+	2888	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	77	4427	-41	1792	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	790	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCGTATTTTTACTGTT	NA	False	NA	NA	False	NA	NA	NA	79825207	79868209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
tx.6517	chr14	+	4919	12	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	83	6219	-35	0	intron_retention	FALSE	canonical	3	1684	junction_8	88.4524432152318	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	79825213	79866417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280
tx.6518	chr14	-	4577	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	9	-4	9	4	multi-exon	FALSE	non_canonical	0	0	junction_5	42.6759570646689	330	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	87378651	86892798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
tx.6519	chr14	-	6009	26	NNC	ENSMUSG00000022021.15	novel	3046	24	NA	NA	-17	14645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	56.1945762507379	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATCTGTATTCAGTAAA	NA	False	NA	NA	False	NA	NA	NA	87378623	87033197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_87036034_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
tx.652	chr1	+	4538	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	1	-6	1	0	multi-exon	FALSE	canonical	0	0	junction_4	74.6873756509937	340	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAAAGTAGATCATTT	NA	False	NA	NA	False	NA	NA	NA	93731687	93749823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
tx.6520	chr14	+	5485	12	FSM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	-208	3	-208	-3	multi-exon	FALSE	canonical	3	80	junction_9	9.05812269605902	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTTTTGTTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	87653866	87752199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
tx.6521	chr14	+	2707	14	FSM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	-50	0	-50	0	multi-exon	FALSE	canonical	3	57	junction_12	16.6232175269033	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCTGGTTCACTTGTC	NA	False	NA	NA	False	NA	NA	NA	87654024	87782940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
tx.6522	chr14	-	2532	2	NNC	ENSMUSG00000115313.2	novel	429	3	NA	NA	656	-13737	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	15	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTCTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	90322672	90315935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_90318195_90322399
tx.6523	chr14	-	2266	2	ISM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	5459	-152	5291	152	3prime_fragment	FALSE	canonical	3	792	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCTGATAGTGAGGG	NA	False	NA	NA	False	NA	NA	NA	99278097	99271827	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_99273947_99277950
tx.6524	chr14	-	2244	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-7	3	7	-3	multi-exon	FALSE	canonical	3	792	junction_1	24.5	497	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTCCTTTTGATA	NA	False	NA	NA	False	NA	NA	NA	99283563	99271982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_99273947_99277950_99278097_99283429
tx.6525	chr14	-	2239	3	FSM	ENSMUSG00000033186.10	ENSMUST00000227948.2	952	3	-48	-1239	-7	-3	multi-exon	FALSE	canonical	3	18	junction_2	387	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTCCTTTTGATA	NA	False	NA	NA	False	NA	NA	NA	99283577	99271982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_99273947_99277950_99278097_99283448
tx.6526	chr14	+	2556	11	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	97.5676688252825	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	99283814	99311976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_99284117_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
tx.6527	chr14	+	2705	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	21	0	21	0	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	288	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	99283833	99311976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
tx.6528	chr14	-	3073	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	9	2068	3	-4	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	707	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2536	False	NA	NA	False	NA	NA	NA	99337197	99314709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
tx.6529	chr14	-	4600	19	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	11	-8	intron_retention	FALSE	canonical	3	393	junction_11	28.7967011999639	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTGCATTTTTATTGA	2544	False	NA	NA	False	NA	NA	NA	99337189	99314713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
tx.653	chr1	+	3130	10	FSM	ENSMUSG00000073609.10	ENSMUST00000097633.10	3232	10	7	95	7	-95	multi-exon	FALSE	canonical	3	12	junction_1	12.154357040244	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCTATCAGTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	93752968	93779975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_93753042_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
tx.6530	chr14	+	4342	16	ISM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-7	30808	-7	7	5prime_fragment	FALSE	canonical	2	66	junction_8	17.8940089291236	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCAACTCTGTGGGAA	NA	False	NA	NA	False	NA	NA	NA	99337335	99461121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994
tx.6531	chr14	+	2803	18	FSM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-6	0	-6	0	multi-exon	FALSE	canonical	2	66	junction_8	18.7005171736119	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACTGTAGAGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	99337336	99491929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
tx.6532	chr14	+	3353	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	-4	3	-4	-3	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	4590	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTGGTGCCTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	99536122	99552469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
tx.6533	chr14	-	6523	19	FSM	ENSMUSG00000033083.17	ENSMUST00000161991.8	6483	19	-43	3	-43	-3	multi-exon	FALSE	canonical	3	15	junction_15	4.49553962758753	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTTTTTTGCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	101846512	101679798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
tx.6534	chr14	-	1621	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	11	-1113	2	-2	multi-exon	FALSE	canonical	3	50	junction_2	193.5	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCCTGTGGTGAGCTGA	NA	False	NA	NA	False	NA	NA	NA	101877882	101870418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_101871829_101874389_101874543_101877824
tx.6535	chr14	-	858	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.5	46	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTATGACGTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	101877888	101871202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_101871829_101874389_101874543_101877809
tx.6536	chr14	+	1190	4	FSM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	20	60	-7	-60	multi-exon	FALSE	canonical	0	0	junction_1	2159.4787951417	39	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTCTCGTTTTCACTA	110	False	NA	NA	False	NA	NA	NA	101891422	101905198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427
tx.6537	chr14	+	909	8	NIC	ENSMUSG00000022111.10	novel	935	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1532.99751720448	1248	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	112	False	NA	NA	False	NA	NA	NA	101891424	101933560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
tx.6538	chr14	+	894	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	1518.39837745338	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	113	False	NA	NA	False	NA	NA	NA	101891425	101933560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_101891542_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
tx.6539	chr14	+	5001	28	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-38	3	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	5.95755448303927	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTTTAAAACTCTTTA	NA	False	NA	NA	False	NA	NA	NA	101967354	102172128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
tx.654	chr1	+	3183	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	8	-24	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.736497298245	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAAAGTTGTGGCTC	NA	False	NA	NA	False	NA	NA	NA	93752969	93780046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
tx.6540	chr14	+	3768	19	ISM	ENSMUSG00000033060.17	ENSMUST00000159314.8	5774	27	55871	-6	12400	4	3prime_fragment	FALSE	canonical	3	16	junction_2	6.04739511313102	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTTAAAACTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	102133954	102172129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
tx.6541	chr14	+	2368	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	74	3	74	-3	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	306	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTTGCATCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	103307725	103315061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
tx.6542	chr14	-	9346	3	ISM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-1	0	-1	0	intron_retention	FALSE	canonical	3	170	junction_2	15	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9921	False	NA	NA	False	NA	NA	NA	103336436	103318469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_103320947_103326737_103326910_103329739
tx.6543	chr14	-	3221	5	FSM	ENSMUSG00000022124.16	ENSMUST00000132004.8	2534	5	-37	-650	-13	0	multi-exon	FALSE	canonical	3	39	junction_3	61.6050931336038	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9909	False	NA	NA	False	NA	NA	NA	103336448	103318469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336204
tx.6544	chr14	-	3372	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-20	0	-20	0	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9902	False	NA	NA	False	NA	NA	NA	103336455	103318469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
tx.6545	chr14	-	3505	5	FSM	ENSMUSG00000022124.16	ENSMUST00000022720.15	4309	5	9	795	9	0	multi-exon	FALSE	canonical	3	60	junction_4	52.2894587847302	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9822	False	NA	NA	False	NA	NA	NA	103336981	103318469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336597
tx.6546	chr14	-	3362	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	68.9759922001851	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9821	False	NA	NA	False	NA	NA	NA	103336982	103318469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336597
tx.6547	chr14	-	3304	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	68.4945253286713	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTTGTATTTTTATA	9827	False	NA	NA	False	NA	NA	NA	103336976	103318471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336791
tx.6548	chr14	-	6391	28	NNC	ENSMUSG00000033004.17	novel	14620	83	NA	NA	-1300	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	8.23872218307406	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGTGTAAAGTATTT	NA	False	NA	NA	False	NA	NA	NA	103393999	103350848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376164_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559
tx.6549	chr14	+	2883	7	FSM	ENSMUSG00000055717.14	ENSMUST00000069443.14	2863	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	39	junction_2	8.46069343099804	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGCTCACGCATGAATG	NA	False	NA	NA	False	NA	NA	NA	103887643	103942343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_103888345_103894368_103894509_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
tx.655	chr1	+	1334	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	26	752	21	-752	multi-exon	FALSE	canonical	3	133	junction_2	1	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTTATATTTATAT	NA	False	NA	NA	False	NA	NA	NA	95241373	95262257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_95241976_95252833_95252969_95261660
tx.6550	chr14	+	3027	8	FSM	ENSMUSG00000055717.14	ENSMUST00000160805.8	1998	8	-432	-597	-14	0	multi-exon	FALSE	canonical	3	18	junction_2	16.4812818998167	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGCTCACGCATGAATG	NA	False	NA	NA	False	NA	NA	NA	103887649	103942343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_103888345_103894368_103894509_103921669_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
tx.6551	chr14	-	2679	2	NIC	ENSMUSG00000048349.10	novel	4445	3	NA	NA	-31	-610	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTTGCAGGGTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	104705466	104699721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_104701981_104705046
tx.6552	chr14	-	3463	6	FSM	ENSMUSG00000022120.5	ENSMUST00000022716.4	3420	6	-43	0	-30	0	multi-exon	FALSE	canonical	3	75	junction_2	11.8490505948789	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTTGATGTCATCAT	NA	False	NA	NA	False	NA	NA	NA	104760111	104714971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
tx.6553	chr14	-	7665	24	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	3633	22	NA	NA	18	0	multi-exon	FALSE	canonical	3	64	junction_11	55.5897067895234	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTTAATGTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	105414741	105344186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
tx.6554	chr14	-	6385	21	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	4212	21	NA	NA	0	0	multi-exon	FALSE	canonical	3	18	junction_1	48.0837550530322	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTTAATGTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	105414759	105344186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
tx.6555	chr14	-	4219	22	FSM	ENSMUSG00000091509.8_ENSMUSG00000022119.16	ENSMUST00000022715.14	3633	22	12	-598	8	500	multi-exon	FALSE	canonical	3	64	junction_9	46.4492994023159	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414751	105351900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
tx.6556	chr14	-	4144	21	FSM	ENSMUSG00000091509.8_ENSMUSG00000022119.16	ENSMUST00000100327.10	3634	21	11	-521	11	500	multi-exon	FALSE	canonical	3	161	junction_11	26.8445059555955	224	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414748	105351900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
tx.6557	chr14	-	5820	20	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	3634	21	NA	NA	-25	500	intron_retention	FALSE	canonical	3	161	junction_10	27.5201261029128	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414725	105351900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr14_-_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
tx.6558	chr14	+	2128	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	-9	-424	-9	-3	multi-exon	TRUE	canonical	3	137	junction_7	99.9552961302691	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTTGTATTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	105496178	105546729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
tx.6559	chr14	+	2359	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	171	2	-9	-2	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTTGTATTTCTTGTA	NA	False	NA	NA	False	NA	NA	NA	105496178	105546730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
tx.656	chr1	-	4894	13	FSM	ENSMUSG00000040693.8	ENSMUST00000071985.6	4908	13	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_9	6.53781733880318	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTTTATTACTCTTTA	NA	False	NA	NA	False	NA	NA	NA	96799882	96743994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_96746833_96748907_96749046_96751421_96751487_96756515_96756701_96759710_96759865_96764604_96764801_96765178_96765324_96766891_96767011_96768854_96768977_96770178_96770276_96772200_96772381_96795449_96795714_96799491
tx.6560	chr14	-	2393	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	-306	0	-306	0	multi-exon	FALSE	canonical	3	119	junction_1	0	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTTGTTTTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	106134559	106129380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_106131236_106134021
tx.6561	chr14	+	559	2	ISM	ENSMUSG00000058571.12	ENSMUST00000123239.2	4146	4	510336	2648	509715	-2648	3prime_fragment	FALSE	canonical	2	6	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGCATTCAACAGGT	NA	False	NA	NA	False	NA	NA	NA	117673062	117861962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_+_117673456_117861796
tx.6562	chr14	-	1685	12	FSM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	0	-3	0	1	multi-exon	FALSE	canonical	3	141	junction_8	15.4084875183551	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTTTATTTTGT	250	False	NA	NA	False	NA	NA	NA	118370159	118349884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
tx.6563	chr14	+	1898	9	FSM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	-23	0	-23	0	multi-exon	FALSE	canonical	3	145	junction_5	22.6463987203264	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTAGCATTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	118374546	118400673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
tx.6564	chr14	+	2919	9	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	60.6460015170003	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAATTAGCATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	118374560	118400670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_118375791_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
tx.6565	chr14	+	1861	9	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	53.8678939629164	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTAGCATTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	118374558	118400673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_118374753_118377173_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
tx.6566	chr14	+	3296	2	FSM	ENSMUSG00000090534.2	ENSMUST00000164755.2	2322	2	-1185	211	-1185	-211	multi-exon	FALSE	canonical	3	20	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATTATCTTGACATAA	NA	False	NA	NA	False	NA	NA	NA	118472458	118475960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_118474357_118474562
tx.6567	chr14	-	5957	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-244	2	-230	-2	multi-exon	TRUE	canonical	3	201	junction_24	29.291276668812	414	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCACAGATCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	118943861	118720105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
tx.6568	chr14	-	4362	23	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_20	9.99721035469561	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGTGGCTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	119162880	119113666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
tx.6569	chr14	-	4079	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	5	-5	5	5	multi-exon	TRUE	canonical	3	20	junction_20	6.55588223176215	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGTGGCTGCTTATTAA	NA	False	NA	NA	False	NA	NA	NA	119162794	119113664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
tx.657	chr1	+	3826	2	FSM	ENSMUSG00000097814.6	ENSMUST00000181489.3	3849	2	23	0	11	0	multi-exon	FALSE	canonical	3	20	junction_1	0	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATCATCTCTATTATTT	NA	False	NA	NA	False	NA	NA	NA	96799968	96808959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_96800394_96805558
tx.6570	chr14	-	4157	22	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	9.03231788855492	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCGACTGTGGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	119162880	119113669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146981_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
tx.6571	chr14	+	5177	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-33	-3	-33	3	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	250	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTGCTTCTTATTCAT	2296	False	NA	NA	False	NA	NA	NA	119175354	119219112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
tx.6572	chr14	-	7688	39	FSM	ENSMUSG00000042104.19	ENSMUST00000156203.8	6456	39	0	-1232	0	1232	multi-exon	TRUE	canonical	0	0	junction_5	1.51355829942615	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACTTGACAAAAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	119336842	119221218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_119224326_119232357_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
tx.6573	chr14	+	4551	9	FSM	ENSMUSG00000022139.18	ENSMUST00000088419.13	4552	9	2	-1	2	1	multi-exon	FALSE	canonical	3	31	junction_3	5.41842920042331	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTGCGGTCTTCCTTC	6831	False	NA	NA	False	NA	NA	NA	120513082	120669110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
tx.6574	chr14	+	4263	2	FSM	ENSMUSG00000051615.15	ENSMUST00000062117.14	4191	2	-72	0	-72	0	multi-exon	FALSE	canonical	3	102	junction_1	0	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTGTGTTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	120715783	120744606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_120716453_120741012
tx.6575	chr14	+	4588	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-73	3	-73	-3	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	2142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGCATTACTTCA	1758	False	NA	NA	False	NA	NA	NA	121148562	121185408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
tx.6576	chr14	+	3748	19	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-73	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	298.461962752168	48	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGATTTGCATTACTTC	1758	False	NA	NA	False	NA	NA	NA	121148562	121185407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159568_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
tx.6577	chr14	+	4945	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-92	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	30.1476887355345	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACCTGTGTCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	121272883	121521154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
tx.6578	chr14	+	4947	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	-62	0	-62	0	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	121272913	121521156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
tx.6579	chr14	+	2778	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	11483	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.2427536216917	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACCACCTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	121503802	121521149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_121503920_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
tx.658	chr1	-	2723	3	FSM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	68	37587	68	-2	multi-exon	FALSE	canonical	3	49	junction_2	5.5	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTGTTTCGTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	97589731	97571629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_97574087_97582324_97582415_97589555
tx.6580	chr14	-	4401	10	ISM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	41676	-2156	22210	2156	3prime_fragment	FALSE	canonical	3	248	junction_7	31.2188610290417	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTCGTGTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	121575070	121521598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833
tx.6581	chr14	-	4762	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	69	-2155	-64	2155	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	330	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTCTCGTGTTGTGG	7372	False	NA	NA	False	NA	NA	NA	121616677	121521599	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
tx.6582	chr14	-	3304	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-178	-5	-178	5	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGTGTGTCTTTG	2960	False	NA	NA	False	NA	NA	NA	121742842	121697027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
tx.6583	chr14	-	7809	53	NIC	ENSMUSG00000025558.20	novel	6996	56	NA	NA	-37	-11	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	11.1448737121231	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATAAACACTGAATGTT	NA	False	NA	NA	False	NA	NA	NA	122035286	121779568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
tx.6584	chr14	-	7795	53	NIC	ENSMUSG00000025558.20	novel	7368	53	NA	NA	69	12	combination_of_known_junctions	FALSE	canonical	3	32	junction_19	9.86634048450655	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGCCATCCTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122035180	121779545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
tx.6585	chr14	-	7964	54	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-36	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	12.5346085513012	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTGTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	122035285	121779559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
tx.6586	chr14	-	7877	53	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-38	-10	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	9.91970351126884	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAACACTGAATGTTT	NA	False	NA	NA	False	NA	NA	NA	122035287	121779567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
tx.6587	chr14	-	7811	53	NIC	ENSMUSG00000025558.20	novel	8107	55	NA	NA	-37	-6	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	11.191448552804	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACACTGAATGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	122035286	121779563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
tx.6588	chr14	+	2159	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-19	-1	-19	1	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	8867	False	NA	NA	False	NA	NA	NA	122116012	122258447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
tx.6589	chr14	+	2113	8	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	-18	4	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	124.704057836208	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTTTTTATACTTC	8868	False	NA	NA	False	NA	NA	NA	122116013	122258450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122231636_122231883_122246202_122246326_122257361
tx.659	chr1	-	5608	30	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	362	-95	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	69.3342384617281	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTATTTGTGTTCTTT	9196	False	NA	NA	False	NA	NA	NA	97697774	97633867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
tx.6590	chr14	+	1717	6	NIC	ENSMUSG00000041765.7	novel	688	5	NA	NA	63	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	151.832275883621	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	2073	False	NA	NA	False	NA	NA	NA	122183788	122258447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_+_122183879_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
tx.6591	chr14	+	2801	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	35	271	35	-271	multi-exon	TRUE	canonical	3	817	junction_12	125.603480743967	599	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	NA	False	NA	NA	NA	122344484	122396745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
tx.6592	chr14	+	1224	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	7	0	7	0	multi-exon	FALSE	canonical	3	643	junction_7	45.2372430997437	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	NA	False	NA	NA	NA	122419122	122639646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
tx.6593	chr14	+	1240	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19454	-2	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	209.063900005989	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	NA	False	NA	NA	NA	122514906	122639644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
tx.6594	chr14	-	3966	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	819	-18	819	18	multi-exon	FALSE	canonical	3	83	junction_1	0	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCACATCTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	122702270	122694188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_122697188_122701303
tx.6595	chr14	+	2493	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	-17	116	-2	0	multi-exon	FALSE	canonical	3	76	junction_1	20.0942015919555	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	122771733	123127240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
tx.6596	chr14	-	1042	3	FSM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	24	10	10	1	multi-exon	FALSE	canonical	3	34	junction_2	3	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTGTTGCTGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	123150550	123128281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_123129229_123137887_123137945_123150512
tx.6597	chr14	-	1261	3	FSM	ENSMUSG00000041625.16	ENSMUST00000162164.2	609	3	-36	-616	-1	1	multi-exon	TRUE	canonical	3	7	junction_2	16.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTGTTGCTGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	123150533	123128281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_123129229_123137887_123137945_123150276
tx.6598	chr14	-	3382	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	34	0	-9	0	multi-exon	TRUE	canonical	3	136	junction_13	13.8696352514015	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	123220661	123156382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
tx.6599	chr14	-	3292	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-17	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	38.2839509410142	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	123220669	123156386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
tx.66	chr1	-	1742	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	-1	0	1	0	multi-exon	FALSE	canonical	3	23	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATTGTAAAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	14826215	14823569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_14824550_14825453
tx.660	chr1	-	5420	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	352	110	352	-110	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	293	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTGAATTTAAAGCATT	9186	False	NA	NA	False	NA	NA	NA	97697784	97633882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
tx.6601	chr15	+	2010	5	FSM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	75	0	-2	0	multi-exon	FALSE	canonical	2	6	junction_1	1.78535710713571	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTCTTTATTGT	9352	False	NA	NA	False	NA	NA	NA	3300477	3309989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_3300535_3304142_3304359_3305048_3305262_3306638_3306757_3308583
tx.6602	chr15	-	4181	11	FSM	ENSMUSG00000055737.13	ENSMUST00000069451.11	4175	11	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	1.02469507659596	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATCTTATGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	3612718	3347241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_3350205_3350470_3350541_3355379_3355471_3357455_3357625_3362828_3363008_3370400_3370574_3375990_3376015_3376953_3377084_3418129_3418196_3487411_3487491_3612481
tx.6603	chr15	-	5568	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	219	junction_2	23.7907545067406	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2178	False	NA	NA	False	NA	NA	NA	4025228	4011519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021947_4025096
tx.6604	chr15	-	5183	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	107.135039397326	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2182	False	NA	NA	False	NA	NA	NA	4025224	4011519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021437_4021550_4021839_4021947_4025096
tx.6605	chr15	-	5075	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	-2	3	-2	-3	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2178	False	NA	NA	False	NA	NA	NA	4025228	4011519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
tx.6606	chr15	+	3282	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	244	1	-57	-1	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAATGTGTGTGTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	4056108	4184825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
tx.6607	chr15	+	391	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	-21	465	-21	0	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	356	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTGGTGATCTAAG	2227	False	NA	NA	False	NA	NA	NA	5146105	5148157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
tx.6608	chr15	+	4636	9	FSM	ENSMUSG00000050697.10	ENSMUST00000051186.9	4655	9	10	9	10	-2	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTACACAGTATTTC	NA	False	NA	NA	False	NA	NA	NA	5173352	5211371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
tx.6609	chr15	+	4531	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTACACAGTATTTCT	NA	False	NA	NA	False	NA	NA	NA	5173364	5211372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
tx.661	chr1	-	5601	29	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	343	-112	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	65.6063068614596	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTTGAATTTAAAGCA	9177	False	NA	NA	False	NA	NA	NA	97697793	97633884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97648830_97649005_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
tx.6611	chr15	+	3636	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	8	-1973	8	1973	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTGTTGTTCTGGTTT	NA	False	NA	NA	False	NA	NA	NA	5215013	5249790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
tx.6612	chr15	+	3804	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	2	-1974	2	1974	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTTGTTCTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	5215042	5249791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
tx.6613	chr15	+	3600	4	ISM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	4019	-1974	2225	1974	3prime_fragment	FALSE	canonical	3	119	junction_1	10.4986771653491	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTTGTTCTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	5219059	5249791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_5219285_5237849_5237932_5241479_5241612_5246630
tx.6614	chr15	+	5138	2	ISM	ENSMUSG00000022151.17	ENSMUST00000081640.12	1583	4	24422	-1969	22795	1969	3prime_fragment	FALSE	canonical	3	143	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATTTGTGTTGTTCTG	2111	False	NA	NA	False	NA	NA	NA	5239629	5249786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_5241612_5246630
tx.6615	chr15	+	3578	15	FSM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	10	1075	10	2	multi-exon	FALSE	canonical	2	3	junction_9	4.17230910471721	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGTGATCTCTCCCAG	8124	False	NA	NA	False	NA	NA	NA	6416088	6469111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
tx.6616	chr15	+	9323	38	FSM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	-11	0	-7	0	multi-exon	TRUE	canonical	3	15	junction_28	25.9902212323754	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGGTGTTGACATT	NA	False	NA	NA	False	NA	NA	NA	6737852	6829882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
tx.6617	chr15	+	9890	20	FSM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	-8	-5739	-8	-7	multi-exon	FALSE	canonical	3	17	junction_15	6.67529450936089	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCTAGTAAATTTGGACA	NA	False	NA	NA	False	NA	NA	NA	7159031	7226963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
tx.6618	chr15	+	2719	16	NIC	ENSMUSG00000054263.13	novel	2844	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	8.17964954424495	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGCGGCACAGGTTAT	NA	False	NA	NA	False	NA	NA	NA	7159039	7214824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7214547
tx.6619	chr15	-	2138	18	FSM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	-8	-4	-8	-3	multi-exon	TRUE	canonical	3	158	junction_1	88.3053055575902	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTCCTTTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	8128683	7902538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
tx.662	chr1	+	1925	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	5	116	-2	-116	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATATGGGTACTACATTT	NA	False	NA	NA	False	NA	NA	NA	97697901	97720578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
tx.6620	chr15	-	1681	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	16	-567	-2	567	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGCTTGGCTATGTTGT	NA	False	NA	NA	False	NA	NA	NA	8128677	8121143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
tx.6621	chr15	+	6384	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	58	1390	-5	1033	multi-exon	TRUE	canonical	3	205	junction_4	36.1069753346922	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTAGTTGTGTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	8138814	8189341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
tx.6622	chr15	-	7498	38	ISM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	93454	-790	93454	790	3prime_fragment	FALSE	canonical	3	23	junction_25	19.169803683532	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTCCGAGCTCTACTTC	6586	False	NA	NA	False	NA	NA	NA	8380493	8319310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687
tx.6623	chr15	-	3202	4	ISM	ENSMUSG00000005360.15	ENSMUST00000125997.2	4435	6	7949	-600	-310	-2	3prime_fragment	FALSE	canonical	3	51	junction_2	3.68178700572909	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTTGTATGTTATTT	NA	False	NA	NA	False	NA	NA	NA	8673041	8663609	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383
tx.6624	chr15	-	3887	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	276	0	-7	0	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	8739972	8663607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
tx.6625	chr15	-	2228	5	FSM	ENSMUSG00000005360.15	ENSMUST00000153455.8	1252	5	-68	-908	-3	908	multi-exon	FALSE	canonical	3	13	junction_1	23.8156986040721	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGTTGCACATATTT	NA	False	NA	NA	False	NA	NA	NA	8739968	8709096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_8710661_8717194_8717297_8717771_8717910_8738045_8738324_8739822
tx.6626	chr15	+	3376	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	35	724	35	307	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	41	False	NA	NA	False	NA	NA	NA	9071374	9110255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
tx.6627	chr15	+	3312	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	33	307	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	39	False	NA	NA	False	NA	NA	NA	9071372	9110255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
tx.6628	chr15	-	3131	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	-13	0	-13	0	multi-exon	TRUE	canonical	3	163	junction_7	20.0690167197789	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGAGCTGCTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	9140465	9112072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
tx.6629	chr15	+	8102	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	-9	5	-9	-5	multi-exon	FALSE	canonical	2	16	junction_6	5.43473386468287	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTCTTGTTGATTATT	23	False	NA	NA	False	NA	NA	NA	9140627	9202564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
tx.663	chr1	-	3740	24	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	-4	2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	5.92422216983633	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGAGTGTATTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	98023361	97748816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_97749714_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
tx.6630	chr15	+	928	5	FSM	ENSMUSG00000039676.5	ENSMUST00000042360.5	949	5	19	2	19	-2	multi-exon	FALSE	canonical	3	64	junction_4	9.67923034130297	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTGCCTCCTTTGAAG	16	False	NA	NA	False	NA	NA	NA	9436132	9466122	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_9436254_9457782_9457920_9461742_9461921_9462676_9462887_9465840
tx.6632	chr15	-	2117	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-64	7	-64	2	multi-exon	TRUE	canonical	3	660	junction_1	60.8163473021321	527	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCTTTCTGCTTCAG	NA	False	NA	NA	False	NA	NA	NA	10470666	10446848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
tx.6633	chr15	-	4954	9	ISM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	34	4	-4	-4	intron_retention	FALSE	canonical	3	2074	junction_1	195.859643622672	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCAATAAGGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	10485999	10474868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380
tx.6634	chr15	-	1240	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	29	1395	-9	-1395	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	719	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTCTTTTCAGAGCCT	NA	False	NA	NA	False	NA	NA	NA	10486004	10476259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
tx.6635	chr15	+	1690	5	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	2	5	intron_retention	FALSE	canonical	3	683	junction_1	74.1598779664584	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGACTTACTGTACTGTC	6	False	NA	NA	False	NA	NA	NA	10486105	10493765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
tx.6636	chr15	+	1221	7	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	13	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	358.631658762395	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGACTTACTGTACTGTC	17	False	NA	NA	False	NA	NA	NA	10486116	10493765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_10486162_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
tx.6637	chr15	+	1582	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_5	316.528039832177	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTTACTGTACTGTCC	34	False	NA	NA	False	NA	NA	NA	10486133	10493766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
tx.6638	chr15	+	1409	7	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	324.625639091486	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGACTTACTGTACTGTC	35	False	NA	NA	False	NA	NA	NA	10486134	10493765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_10486368_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
tx.6639	chr15	+	1478	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	30	6	-1	-1	multi-exon	FALSE	canonical	3	345	junction_1	183.88039590995	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTACTGTACTGTCCTGT	34	False	NA	NA	False	NA	NA	NA	10486133	10493769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
tx.664	chr1	-	3786	25	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	5.09884927105017	30	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCAGAGTGTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	98023355	97748818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
tx.6640	chr15	-	3181	4	ISM	ENSMUSG00000022246.15	ENSMUST00000090339.11	4909	18	138064	6	24611	-6	3prime_fragment	FALSE	canonical	3	179	junction_3	8.60232526704263	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	10575562	10569060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397
tx.6641	chr15	-	4770	16	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-134	-6	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	41.6628798279182	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	8706	False	NA	NA	False	NA	NA	NA	10714844	10569060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
tx.6642	chr15	-	4958	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-205	6	-148	-6	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	8692	False	NA	NA	False	NA	NA	NA	10714858	10569060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
tx.6643	chr15	-	4871	17	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-148	-6	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	36.5957114119947	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	8692	False	NA	NA	False	NA	NA	NA	10714858	10569060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
tx.6645	chr15	-	2621	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	22	1362	22	342	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	2718	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAAGACCTCTGTCCTC	NA	False	NA	NA	False	NA	NA	NA	11399729	11383748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
tx.6646	chr15	-	4512	2	ISM	ENSMUSG00000022241.7	ENSMUST00000226944.2	859	6	-1130	-300	-1130	300	intron_retention	FALSE	canonical	3	3318	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTGAATTATGGCGTT	NA	False	NA	NA	False	NA	NA	NA	11389226	11383790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_11384246_11385169
tx.6647	chr15	-	6930	8	FSM	ENSMUSG00000022206.8	ENSMUST00000066529.5	6892	8	-42	4	-7	-4	multi-exon	FALSE	canonical	3	12	junction_2	7.24498419034627	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGTTTCCTGTCTATA	1438	False	NA	NA	False	NA	NA	NA	11905767	11839985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_11845375_11846383_11846472_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
tx.6648	chr15	-	6914	8	FSM	ENSMUSG00000022206.8	ENSMUST00000228603.2	2437	8	4	-4481	4	-6	multi-exon	FALSE	canonical	3	16	junction_2	6.17433793856409	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAACAGTTTCCTGTCTA	1449	False	NA	NA	False	NA	NA	NA	11905756	11839987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
tx.6649	chr15	-	684	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	52	2636	6	66	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	1555	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	861	False	NA	NA	False	NA	NA	NA	11996092	11984060	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
tx.665	chr1	-	6774	31	FSM	ENSMUSG00000056536.15	ENSMUST00000186485.7	6759	31	-12	-3	-1	-1	multi-exon	TRUE	canonical	3	42	junction_6	10.8119789534057	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTTGTGATAAGACAT	NA	False	NA	NA	False	NA	NA	NA	105591399	105446147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
tx.6650	chr15	+	4438	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-10	-230	combination_of_known_splicesites	TRUE	canonical	1	10	junction_6	165.91817111508	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTGTTATGTGGTAG	30	False	NA	NA	False	NA	NA	NA	12117906	12185539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
tx.6651	chr15	+	4625	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	-9	234	-9	-234	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	974	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	31	False	NA	NA	False	NA	NA	NA	12117907	12185535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
tx.6652	chr15	+	4644	21	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-7	-237	combination_of_known_splicesites	FALSE	canonical	1	46	junction_3	185.137489450408	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTACTTGTGTTAT	33	False	NA	NA	False	NA	NA	NA	12117909	12185532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
tx.6653	chr15	+	4503	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	8	-239	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	163.420573829054	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGACTTACTTGTGTT	48	False	NA	NA	False	NA	NA	NA	12117924	12185530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
tx.6654	chr15	+	4480	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-11	2371	-11	6	multi-exon	TRUE	canonical	3	174	junction_5	33.0552399611452	352	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTGAGTCAGCTTCAC	9	True	NA	NA	False	NA	NA	NA	12205102	12272211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
tx.6655	chr15	+	4455	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-87	-9	-11	9	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGTCAGCTTCACTGT	9	True	NA	NA	False	NA	NA	NA	12205102	12272214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
tx.6656	chr15	+	2977	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	1	-326	1	0	multi-exon	TRUE	canonical	3	392	junction_2	32.4174164437712	628	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTATTTTATGAGT	-4	True	NA	NA	False	NA	NA	NA	12321536	12351677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
tx.6657	chr15	-	3722	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	9	235	1	234	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	417	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAATTTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	12824726	12808497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
tx.6658	chr15	+	4476	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	-2	45	-2	-44	multi-exon	FALSE	canonical	3	495	junction_3	95.4793814587056	731	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	51	False	NA	NA	False	NA	NA	NA	12824946	12935332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
tx.6659	chr15	+	4499	32	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	8696	45	-3791	-44	3prime_fragment	FALSE	canonical	3	538	junction_3	90.1454368888601	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	32	False	NA	NA	False	NA	NA	NA	12833644	12935332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
tx.666	chr1	-	6646	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_28	13.8006014103214	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTTTTCTTGTGATAA	NA	False	NA	NA	False	NA	NA	NA	105591396	105446152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
tx.6660	chr15	-	5182	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4043	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9797	False	NA	NA	False	NA	NA	NA	22705093	22699818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_22704588_22704680
tx.6661	chr15	-	3726	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	9848	False	NA	NA	False	NA	NA	NA	22704397	22699819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_22700670_22701521
tx.6662	chr15	-	1851	2	FSM	ENSMUSG00000045763.9	ENSMUST00000058845.9	1855	2	4	0	4	0	multi-exon	FALSE	canonical	3	95	junction_1	0	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGGCTTTTGGCTTGA	NA	False	NA	NA	False	NA	NA	NA	25413846	25363362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_25365005_25413637
tx.6663	chr15	+	6005	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	624	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	16	False	NA	NA	False	NA	NA	NA	25774098	25813757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
tx.6664	chr15	+	5084	17	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	28065	0	785	0	3prime_fragment	FALSE	canonical	3	658	junction_13	51.5299897511148	138	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	1044	False	NA	NA	False	NA	NA	NA	25781060	25813757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
tx.6665	chr15	+	3143	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	104	1	104	-1	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTTATGTGTATGC	12	False	NA	NA	False	NA	NA	NA	25843369	25973772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
tx.6666	chr15	+	1748	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	2	1052	2	2	multi-exon	TRUE	canonical	3	450	junction_2	26.9962960422351	297	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTATTTGAGCAGTGTT	29	False	NA	NA	False	NA	NA	NA	25984453	25997515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
tx.6667	chr15	+	3547	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-49	0	-49	0	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTCATGCT	3	True	NA	NA	False	NA	NA	NA	27466713	27594995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
tx.6668	chr15	-	1425	6	NIC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	-7	4	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	98.7825895590918	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTATTTGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	27630786	27606000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630543
tx.6669	chr15	-	3713	7	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	-5	2244	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	84.6707676172177	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTGCAGTTCATCTC	NA	False	NA	NA	False	NA	NA	NA	27630784	27603760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_27606548_27608704_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
tx.667	chr1	+	5379	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	8	-65	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	26.82273631965	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	105591593	105682846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
tx.6670	chr15	-	1499	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	220	junction_2	23.0771652408946	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTTTGTATTTGATT	NA	False	NA	NA	False	NA	NA	NA	27630787	27606004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
tx.6671	chr15	+	5897	22	FSM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	-516	-1270	-58	-30	multi-exon	FALSE	canonical	0	0	junction_3	16.3558778189685	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAAATAA	-24	True	NA	NA	False	NA	NA	NA	30172680	31029457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_30173310_30332155_30332293_30480927_30481041_30619367_30619400_30619968_30620086_30634789_30634963_30646914_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
tx.6673	chr15	+	4845	17	ISM	ENSMUSG00000022240.11	ENSMUST00000081728.7	5944	23	474102	30	163	-30	3prime_fragment	FALSE	canonical	2	8	junction_10	13.4530433359891	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAAATAA	86	False	NA	NA	False	NA	NA	NA	30646840	31029457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30920857_30920933_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
tx.6675	chr15	+	1449	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	105	1	-36	-1	multi-exon	FALSE	canonical	3	65	junction_3	1.69967317119759	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTCTCTTACGGTTCA	96	False	NA	NA	False	NA	NA	NA	31224564	31274486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
tx.6676	chr15	-	7134	3	ISM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	42403	-248	-74	248	3prime_fragment	FALSE	canonical	2	3	junction_2	2	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGGAAATATATTTTTA	NA	False	NA	NA	False	NA	NA	NA	31325469	31291375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_31298131_31305137_31305279_31325231
tx.6677	chr15	-	7309	4	FSM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	153	4	-5	-4	multi-exon	FALSE	canonical	2	3	junction_2	1.88561808316413	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATATGGTATTTTCCTG	42	False	NA	NA	False	NA	NA	NA	31367719	31291627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_31298131_31305137_31305279_31325231_31325362_31367184
tx.6678	chr15	-	3480	2	ISM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	69013	8	9951	-8	3prime_fragment	FALSE	canonical	3	126	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTCTTTTTGGCT	5789	False	NA	NA	False	NA	NA	NA	31462186	31456044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_31459426_31462087
tx.6679	chr15	-	6235	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	16	9	16	-9	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTGTTTTCTTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	31531183	31456045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
tx.668	chr1	+	5381	29	FSM	ENSMUSG00000026319.14	ENSMUST00000039173.13	4328	29	-7	-1046	-7	-65	multi-exon	FALSE	canonical	3	86	junction_7	18.9304244376019	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	105591600	105682846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
tx.6680	chr15	-	6275	26	NNC	ENSMUSG00000039100.11	novel	6260	26	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	25.5607824606368	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTCTTTTTGGCT	NA	False	NA	NA	False	NA	NA	NA	31531207	31456044	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471960_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
tx.6681	chr15	-	1751	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	22	80	22	-80	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	5496	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTGCAGTTACTGCTG	NA	False	NA	NA	False	NA	NA	NA	31601928	31591025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
tx.6682	chr15	+	1142	5	FSM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	13	9	13	-9	multi-exon	FALSE	canonical	3	10	junction_1	6.68954408012983	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGCTTTATAACCGTGA	128	False	NA	NA	False	NA	NA	NA	31602276	31617672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_31602296_31606056_31606335_31608241_31608380_31609711_31609763_31617016
tx.6683	chr15	+	3274	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	47	206	47	-206	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCATTGTATAGACTCACA	73	False	NA	NA	False	NA	NA	NA	32920915	33034875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
tx.6684	chr15	+	2653	2	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	1	4136	multi-exon	FALSE	canonical	3	15	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831594	33838635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr15_+_33831870_33836257
tx.6685	chr15	+	4596	10	FSM	ENSMUSG00000022255.17	ENSMUST00000163333.9	1593	10	-613	-2390	1	-2091	multi-exon	FALSE	canonical	3	69	junction_9	216.816757131084	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTTACATTCTCTGT	28	False	NA	NA	False	NA	NA	NA	34082840	34143679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34140837
tx.6686	chr15	+	4946	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	1	-2087	combination_of_known_junctions	TRUE	canonical	3	44	junction_6	197.527406677881	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	28	False	NA	NA	False	NA	NA	NA	34082840	34143683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
tx.6687	chr15	+	4856	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-24	2087	1	-2087	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	642	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	28	False	NA	NA	False	NA	NA	NA	34082840	34143683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
tx.6688	chr15	+	4697	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	3	-2087	combination_of_known_junctions	FALSE	canonical	3	69	junction_10	158.303032188269	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	30	False	NA	NA	False	NA	NA	NA	34082842	34143683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
tx.6689	chr15	+	4755	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	3	-2087	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	30	False	NA	NA	False	NA	NA	NA	34082842	34143683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
tx.669	chr1	+	4957	5	ISM	ENSMUSG00000026319.14	ENSMUST00000191293.7	5109	22	-568	47238	-10	4118	5prime_fragment	FALSE	canonical	3	95	junction_1	9.12071817347735	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAACATCTTATTAACGG	NA	False	NA	NA	False	NA	NA	NA	105591597	105618984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006
tx.6690	chr15	+	1790	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	107	5	-14	2	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	359	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACAGTCGTGGCTCCGC	97	False	NA	NA	False	NA	NA	NA	34238280	34284443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
tx.6691	chr15	-	543	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	32	-5	-30	0	multi-exon	FALSE	canonical	3	4307	junction_1	558.07426825548	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	393	False	NA	NA	False	NA	NA	NA	34443336	34440650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
tx.6692	chr15	-	522	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	364	0	-17	0	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	307	False	NA	NA	False	NA	NA	NA	34443422	34440650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
tx.6693	chr15	-	993	6	FSM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	10	1	10	-1	multi-exon	FALSE	canonical	3	250	junction_4	17.7245592328836	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTTTTTAATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	34495391	34484167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
tx.6694	chr15	+	3311	16	FSM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	-25	-11	-6	0	multi-exon	FALSE	canonical	3	39	junction_3	10.1552394796425	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATTTGTTTTTAATCT	69	False	NA	NA	False	NA	NA	NA	34495443	34530794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
tx.6695	chr15	+	3084	8	ISM	ENSMUSG00000115005.2_ENSMUSG00000022325.15_ENSMUSG00000084607.3	ENSMUST00000079028.6	3275	16	15039	-1202	455	16	3prime_fragment	FALSE	canonical	3	42	junction_2	7.60504665954638	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGTTAAAAAAAAACATTG	NA	False	NA	NA	False	NA	NA	NA	34510507	34531985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
tx.6696	chr15	-	2838	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	74	2	18	-2	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	349	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCGTTGTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	35155878	34875643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
tx.6697	chr15	+	1853	4	NIC	ENSMUSG00000022330.6	novel	1724	4	NA	NA	-45	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	14.8548533034381	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTGAGATTCATCTTG	72	False	NA	NA	False	NA	NA	NA	35296198	35303453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_35296614_35300334_35301102_35302057_35302158_35302882
tx.6698	chr15	+	1724	4	FSM	ENSMUSG00000022330.6	ENSMUST00000022952.6	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	10.1434160364686	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTCTTGAGATTCATCT	117	False	NA	NA	False	NA	NA	NA	35296243	35303451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_35296614_35300334_35301102_35302057_35302158_35302964
tx.6699	chr15	+	13384	62	FSM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	372	1	6	-1	multi-exon	TRUE	canonical	3	23	junction_44	12.5602231076886	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTGTGCTGTGAGTT	132	False	NA	NA	False	NA	NA	NA	35371677	35931374	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450_35794636_35834329_35834527_35840020_35840203_35841394_35841745_35846991_35847154_35869432_35869589_35875707_35875972_35876525_35876610_35876787_35876964_35877642_35877814_35878788_35878991_35879914_35880104_35883034_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
tx.67	chr1	+	1643	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	4	621	4	-39	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	518	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTTTGTTCTATTCCAT	NA	False	NA	NA	False	NA	NA	NA	15875873	15913655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
tx.670	chr1	+	6430	13	NIC	ENSMUSG00000038866.16	novel	6368	13	NA	NA	-43	-3	intron_retention	FALSE	canonical	3	22	junction_11	16.9016764454496	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATTATGCCTTATTGC	NA	False	NA	NA	False	NA	NA	NA	105918375	105961801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481
tx.6700	chr15	+	7357	39	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	-5	-48994	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_20	11.9311564014052	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAACATACTTTTTA	141	False	NA	NA	False	NA	NA	NA	35371686	35794686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
tx.6701	chr15	-	488	3	FSM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	252	-2	-224	-2	multi-exon	FALSE	canonical	3	8821	junction_1	415.5	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGCTTGGTTATTA	655	False	NA	NA	False	NA	NA	NA	35937539	35932123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_35932244_35935430_35935560_35937300
tx.6702	chr15	-	2997	2	FSM	ENSMUSG00000014313.16	ENSMUST00000127999.2	3038	2	45	-4	45	1	multi-exon	FALSE	canonical	3	8821	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTTTGCTTGGTTATT	NA	False	NA	NA	False	NA	NA	NA	35938308	35932124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_35932244_35935430
tx.6703	chr15	-	440	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	59	4	20	0	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	1135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	35938333	35932125	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
tx.6704	chr15	+	472	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	21	-4	-2	1	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTCAATGTCTTG	130	False	NA	NA	False	NA	NA	NA	36174176	36177157	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
tx.6705	chr15	+	3495	19	NNC	ENSMUSG00000037617.13	novel	3646	19	NA	NA	-59	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.4173998513349	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTATGCCTGCGTGTC	123	False	NA	NA	False	NA	NA	NA	36179454	36235762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_36179524_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
tx.6706	chr15	+	2441	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	-45	-8	-45	-3	multi-exon	FALSE	canonical	3	39	junction_4	7	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTATGCCTGCGTGTCTG	27	False	NA	NA	False	NA	NA	NA	36210562	36235764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
tx.6707	chr15	-	4288	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-12	1	-12	-1	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	277	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTGTGTGCCCAGGAA	NA	False	NA	NA	False	NA	NA	NA	36283305	36240079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
tx.6708	chr15	-	2469	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	40	0	9	0	multi-exon	FALSE	canonical	3	250	junction_4	35.6195171219375	466	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	36496926	36477813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
tx.6709	chr15	-	2818	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	-1	0	1	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	8724	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	NA	False	NA	NA	NA	36609217	36595903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
tx.671	chr1	+	6589	13	FSM	ENSMUSG00000038866.16	ENSMUST00000119166.8	6368	13	-220	-1	63	1	multi-exon	FALSE	canonical	3	40	junction_3	12.1609575646365	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAGAATTATGCCTTAT	NA	False	NA	NA	False	NA	NA	NA	105918198	105961798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
tx.6710	chr15	-	2393	4	ISM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	18168	0	16044	0	3prime_fragment	FALSE	canonical	3	3946	junction_3	166.194664976547	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	NA	False	NA	NA	False	NA	NA	NA	36776614	36771013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489
tx.6711	chr15	-	2830	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	226	-934	-92	0	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	5979	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	666	False	NA	NA	False	NA	NA	NA	36793855	36771013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
tx.6712	chr15	-	5698	3	ISM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	41	1983	41	1618	intron_retention	FALSE	canonical	3	6501	junction_2	120	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	196	False	NA	NA	False	NA	NA	NA	37007605	36999253	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_37001168_37002082_37002191_37003929
tx.6713	chr15	-	2425	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	15	1977	15	1624	multi-exon	TRUE	canonical	3	6501	junction_2	212.49836600679	3833	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGTCTAATTTCTTGT	170	False	NA	NA	False	NA	NA	NA	37007631	36999247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
tx.6714	chr15	+	3052	3	ISM	ENSMUSG00000022286.17	ENSMUST00000161933.2	3617	9	29297	-6	11963	-1	3prime_fragment	FALSE	canonical	3	68	junction_1	5	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCTCTAGTACTTTCT	178	False	NA	NA	False	NA	NA	NA	37347943	37363812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_37348099_37358613_37358679_37360980
tx.6715	chr15	-	3238	4	ISM	ENSMUSG00000051359.16	ENSMUST00000153775.9	794	6	170904	-2582	-104106	0	3prime_fragment	FALSE	canonical	1	2	junction_2	2.05480466765633	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCATTGTCTGGAACAT	NA	False	NA	NA	False	NA	NA	NA	37563710	37366510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_37369170_37372359_37372466_37397300_37397698_37563634
tx.6716	chr15	-	4508	9	FSM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	53	0	53	0	multi-exon	FALSE	canonical	3	32	junction_4	8.71779788708135	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTTATATCATTTT	7161	False	NA	NA	False	NA	NA	NA	37961294	37924195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_37927642_37929281_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
tx.6717	chr15	-	3115	19	ISM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	86690	2	-527	-2	3prime_fragment	FALSE	canonical	3	678	junction_11	97.2672276784268	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTTTTATGGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	37992408	37968104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195
tx.6718	chr15	-	9230	59	FSM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	7	5	7	-5	multi-exon	TRUE	canonical	0	0	junction_21	176.45579964147	232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	NA	False	NA	NA	NA	38079091	37968107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
tx.6719	chr15	-	9247	59	FSM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	-422	-428	7	-6	multi-exon	FALSE	canonical	0	0	junction_21	178.88035064093	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	NA	False	NA	NA	False	NA	NA	NA	38079091	37968108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
tx.672	chr1	+	5748	14	FSM	ENSMUSG00000038866.16	ENSMUST00000118196.8	5796	14	45	3	45	-3	multi-exon	FALSE	canonical	3	33	junction_13	14.3605310511487	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATTATGCCTTATTGC	NA	False	NA	NA	False	NA	NA	NA	105918180	105961801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
tx.6720	chr15	-	3046	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	3911	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	NA	False	NA	NA	NA	38300952	38294656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
tx.6721	chr15	-	4042	5	NNC	ENSMUSG00000115009.2	novel	2819	5	NA	NA	-116	1264	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	3.11247489949718	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTGTTCGTGATTCT	NA	False	NA	NA	False	NA	NA	NA	38455494	38435204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_38438614_38445370_38445501_38453402_38453648_38454915_38455060_38455380
tx.6722	chr15	-	4275	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	-3	-55	0	55	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	NA	False	NA	NA	NA	38519510	38488426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
tx.6723	chr15	-	4114	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	757	0	54	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	497	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTATATTGCCCAC	NA	False	NA	NA	False	NA	NA	NA	38519510	38488427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
tx.6724	chr15	+	2056	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	12	3	1	0	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	604	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	196	False	NA	NA	False	NA	NA	NA	38662188	38692687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
tx.6725	chr15	+	4055	7	FSM	ENSMUSG00000022297.16	ENSMUST00000179165.9	4325	7	274	-4	-25	4	multi-exon	FALSE	canonical	2	8	junction_1	5.64702478203247	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATTGTGTGCTAGGT	NA	False	NA	NA	False	NA	NA	NA	38869702	38901587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_38869828_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
tx.6726	chr15	+	4108	7	FSM	ENSMUSG00000022297.16	ENSMUST00000022906.8	4081	7	-21	-6	-21	4	multi-exon	FALSE	canonical	2	5	junction_1	6.28269227499025	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATTGTGTGCTAGGT	NA	False	NA	NA	False	NA	NA	NA	38869706	38901587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_38869885_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
tx.6727	chr15	-	2418	7	NNC	ENSMUSG00000022299.10	novel	5905	7	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	35.1267546022813	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAATTTGGCCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	38976076	38954624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_38956051_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
tx.6728	chr15	-	4868	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	27	1010	-16	-1010	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	38976084	38955635	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
tx.6729	chr15	+	1526	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	25	0	25	0	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	253	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	38976284	39010251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
tx.673	chr1	+	5766	14	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	17.8706728117763	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATGCCTTATTGCAAG	NA	False	NA	NA	False	NA	NA	NA	105918180	105961804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481_105958964_105959825
tx.6730	chr15	+	8048	27	NIC	ENSMUSG00000037386.17	novel	4719	27	NA	NA	-748	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_20	12.048717675883	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTGAGGGTGCTG	NA	False	NA	NA	False	NA	NA	NA	39060907	39547768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39473459_39473538_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
tx.6731	chr15	+	5731	26	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-180	248	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	11.0478233150245	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATATACAGATCTTATG	NA	False	NA	NA	False	NA	NA	NA	39061475	39546097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
tx.6732	chr15	+	7203	25	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-161	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_16	12.0439011767598	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTGAGGGTGCTG	NA	False	NA	NA	False	NA	NA	NA	39061494	39547768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
tx.6733	chr15	-	1308	3	Antisense	novelGene_ENSMUSG00000037386.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	116	11	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	2128	False	NA	NA	False	NA	NA	NA	39110542	39105323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_-_39106174_39108258_39108492_39110317
tx.6736	chr15	-	710	2	ISM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	72605	0	8386	0	3prime_fragment	FALSE	canonical	3	216	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	39648261	39646092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_39646506_39647964
tx.6737	chr15	-	2104	10	FSM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	6	0	3	0	multi-exon	FALSE	canonical	0	0	junction_5	67.0043300609265	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	39720860	39646092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_39646506_39647964_39648111_39656622_39656831_39687561_39687705_39690259_39690402_39691370_39691528_39705318_39705509_39707253_39707434_39710004_39710164_39720494
tx.6739	chr15	-	4272	6	FSM	ENSMUSG00000022305.14	ENSMUST00000110305.3	4244	6	-18	-10	-18	-4	multi-exon	FALSE	canonical	3	14	junction_5	13.6733317081098	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCAAAGTTGTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	39807408	39733988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39806999
tx.674	chr1	+	5660	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	48	-9	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	20.013016597538	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAAACAGCCTAAGAAT	NA	False	NA	NA	False	NA	NA	NA	105918183	105961788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
tx.6740	chr15	-	4317	7	FSM	ENSMUSG00000022305.14	ENSMUST00000022916.13	4109	7	-211	3	-5	-3	multi-exon	FALSE	canonical	3	34	junction_6	6.95221787153807	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAAGTTGTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	39807395	39733987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39767934_39767992_39806999
tx.6741	chr15	+	291	3	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_1	14.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGCCTTAATTC	NA	False	NA	NA	False	NA	NA	NA	41210836	41215818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_+_41210883_41214473_41214592_41215691
tx.6743	chr15	+	4428	15	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_9	93.88912805723	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	41652336	41724444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
tx.6744	chr15	+	4347	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	-1	0	0	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	41652336	41724444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
tx.6745	chr15	+	2998	9	ISM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	-11	34015	-11	3	5prime_fragment	FALSE	canonical	3	180	junction_7	41.0662574384372	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGTTTCATTTATAATA	NA	False	NA	NA	False	NA	NA	NA	41652325	41690428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285
tx.6746	chr15	+	3349	8	ISM	ENSMUSG00000022307.17	ENSMUST00000090095.13	4158	14	30383	3	-11034	-1	3prime_fragment	FALSE	canonical	3	180	junction_1	39.2298303824619	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAGTTTGGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	41683293	41724440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
tx.6747	chr15	-	1511	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	0	-5	0	5	multi-exon	TRUE	canonical	3	2495	junction_1	136.260065887095	1037	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2663	False	NA	NA	False	NA	NA	NA	43146115	43113448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
tx.6748	chr15	+	1208	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	29	-6	17	6	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	297	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTAGTTTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	43340653	43391165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
tx.6749	chr15	-	3016	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	426	-842	7	842	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTAGTGATGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	44291277	44238624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
tx.675	chr1	+	6268	17	FSM	ENSMUSG00000044340.8	ENSMUST00000061047.7	6226	17	-48	6	-48	-6	multi-exon	TRUE	canonical	3	23	junction_9	5.5589876551401	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAATCTATCTGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	106099433	106321974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106308047_106308153_106314056_106314252_106317403_106317633_106319858
tx.6750	chr15	+	635	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-17	2382	2	7	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTATTTTGGAATAAA	9618	False	NA	NA	False	NA	NA	NA	44291489	44299270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
tx.6751	chr15	+	572	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	0	-14	0	-13	multi-exon	FALSE	canonical	3	313	junction_1	272.243457221657	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGGAATAAATGGGACT	9616	False	NA	NA	False	NA	NA	NA	44291487	44299277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
tx.6752	chr15	+	2025	4	NIC	ENSMUSG00000022338.9	novel	767	6	NA	NA	0	5	intron_retention	FALSE	canonical	3	627	junction_1	155.701280948131	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTATTTTGGAATA	9616	False	NA	NA	False	NA	NA	NA	44291487	44299268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_44291639_44292955_44293033_44295833_44297370_44299007
tx.6753	chr15	+	3042	6	FSM	ENSMUSG00000022338.9	ENSMUST00000228130.2	654	6	-26	-2362	-7	0	multi-exon	FALSE	canonical	3	35	junction_2	414.684747730128	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCTCATTGATTT	9625	False	NA	NA	False	NA	NA	NA	44291496	44301652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_44291567_44292955_44293033_44294086_44294191_44295833_44295905_44297294_44297370_44299007
tx.6754	chr15	+	6114	2	FSM	ENSMUSG00000022338.9_ENSMUSG00000118768.1	ENSMUST00000228372.2	684	2	-5429	-1	1	0	multi-exon	FALSE	canonical	3	996	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9640	False	NA	NA	False	NA	NA	NA	44291511	44299263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_44297370_44299007
tx.6755	chr15	+	1954	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	-12	3	-12	-3	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAACTGATTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	44482558	44504908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
tx.6756	chr15	+	1794	7	FSM	ENSMUSG00000022339.10	ENSMUST00000022964.9	1613	7	-89	-92	62	92	multi-exon	FALSE	canonical	3	4	junction_1	29.9467119322899	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAATGACAACTTTGTG	NA	False	NA	NA	False	NA	NA	NA	44482897	44504514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_44483339_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
tx.6757	chr15	+	2225	7	FSM	ENSMUSG00000022339.10	ENSMUST00000226165.2	1931	7	-5	-289	-5	2	multi-exon	FALSE	canonical	2	3	junction_1	30.3076814612328	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGATTTTCTGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	44482830	44504913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_44483304_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
tx.6758	chr15	-	1254	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	39	2	-30	-2	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	1158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTGTGTATTTATGG	NA	False	NA	NA	False	NA	NA	NA	51728880	51649955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
tx.6759	chr15	+	2263	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	16	642	16	-642	multi-exon	FALSE	canonical	3	321	junction_1	13	148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTGGTCATAAACTCG	NA	False	NA	NA	False	NA	NA	NA	51740840	51747368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_51741107_51744411_51744587_51745546
tx.676	chr1	-	2646	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	17	2855	-11	-2855	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	246	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACAAACAAAAAAAACCCC	8278	False	NA	NA	False	NA	NA	NA	106687440	106651043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
tx.6760	chr15	-	3587	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	5	364	5	-364	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	1446	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	NA	False	NA	NA	NA	51855138	51825999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
tx.6761	chr15	+	1299	2	FSM	ENSMUSG00000068522.5	ENSMUST00000090025.5	1348	2	48	1	48	-1	multi-exon	FALSE	canonical	3	258	junction_1	0	160	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTTTCTAGTGGTCA	NA	False	NA	NA	False	NA	NA	NA	51903550	51909117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_51903927_51908194
tx.6762	chr15	+	901	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	-25	131	9	-131	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTACTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	52575812	52593829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
tx.6763	chr15	-	1680	10	ISM	ENSMUSG00000061731.10	ENSMUST00000077273.9	7663	11	238588	4225	297	401	3prime_fragment	TRUE	canonical	3	104	junction_4	9.53486131241108	149	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGTTGGTTGTGTATA	NA	False	NA	NA	False	NA	NA	NA	52970967	52931658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_52932246_52936688_52936861_52939164_52939326_52946480_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52965201_52969422_52969531_52970873
tx.6764	chr15	-	4804	27	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	46.4106318160196	77	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTGCCTTTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	54935546	54878526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934834_54935238
tx.6765	chr15	-	5023	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_25	40.9646872318098	255	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTGCCTTTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	54935546	54878526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934834_54935238
tx.6766	chr15	-	1322	9	FSM	ENSMUSG00000022422.14	ENSMUST00000023059.13	1324	9	2	0	2	0	multi-exon	FALSE	canonical	3	218	junction_7	27.4268914571083	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCCTGACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	54953885	54939494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
tx.6767	chr15	-	1521	10	FSM	ENSMUSG00000022422.14	ENSMUST00000110231.2	1499	10	-19	-3	-8	0	multi-exon	FALSE	canonical	3	26	junction_5	97.4314573887145	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCCTGACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	54953895	54939494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54946800_54946990_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
tx.6768	chr15	+	8478	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	69	0	-38	0	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGCTGACTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	54975781	55122667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
tx.6769	chr15	-	707	6	FSM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	23	0	23	0	multi-exon	FALSE	canonical	3	91	junction_4	366.126754007407	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	NA	False	NA	NA	NA	55420722	55397489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55418715_55418840_55420653
tx.677	chr1	-	2856	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	50	1727	-11	-1727	multi-exon	TRUE	canonical	3	455	junction_4	35.0793386482699	828	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTTTTATATGTTT	74	False	NA	NA	False	NA	NA	NA	106724408	106698886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
tx.6770	chr15	-	804	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	419	0	20	0	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	NA	False	NA	NA	NA	55420725	55397489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
tx.6771	chr15	+	2990	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	154	0	-33	0	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	248	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	NA	NA	NA	55420957	55489819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
tx.6772	chr15	-	4918	7	FSM	ENSMUSG00000060429.13	ENSMUST00000039769.13	4919	7	-1	2	-1	-2	multi-exon	FALSE	canonical	0	0	junction_6	17.2916164657906	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTAGGCTTATAATTT	NA	False	NA	NA	False	NA	NA	NA	55770346	55499785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55612583_55612792_55655429_55655647_55769419
tx.6773	chr15	-	3828	5	NNC	ENSMUSG00000060429.13	novel	4919	7	NA	NA	221643	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	6.21992765231236	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTAGGCTTATAATTT	9285	False	NA	NA	False	NA	NA	NA	55548063	55499785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55547801
tx.6774	chr15	-	3567	4	ISM	ENSMUSG00000060429.13	ENSMUST00000039769.13	4919	7	230503	4	229864	-4	3prime_fragment	FALSE	canonical	3	32	junction_1	5.31245915016974	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCCTAGGCTTATAAT	NA	False	NA	NA	False	NA	NA	NA	55539842	55499787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699
tx.6775	chr15	+	4011	2	Antisense	novelGene_ENSMUSG00000060429.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	55735055	55740289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_+_55738854_55740076
tx.6776	chr15	-	2928	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-24	271	-24	-271	multi-exon	TRUE	canonical	3	365	junction_5	42.5977866628236	631	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTCTGTGTTAAGTT	NA	False	NA	NA	False	NA	NA	NA	57755868	57733168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
tx.6777	chr15	+	3555	17	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	-1	-1	-1	1	intron_retention	FALSE	canonical	3	200	junction_2	25.2003689209107	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCTGCATGTAATTGA	NA	False	NA	NA	False	NA	NA	NA	57775628	57822799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
tx.6778	chr15	+	3474	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	57775627	57833458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
tx.6779	chr15	+	3278	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	34	-1	-1	1	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	57775628	57833458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
tx.678	chr1	-	5758	2	FSM	ENSMUSG00000038702.7	ENSMUST00000035462.7	5759	2	1	0	1	0	multi-exon	FALSE	canonical	3	14	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACGTTGTATAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	111792647	111786435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_111791371_111791824
tx.6780	chr15	+	2798	17	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	20000	1	combination_of_known_junctions	FALSE	canonical	3	77	junction_13	67.1629315545413	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	57799408	57833458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
tx.6781	chr15	-	2839	2	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCACAAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	57840849	57837909	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_57839652_57839752
tx.6782	chr15	+	2279	4	FSM	ENSMUSG00000051225.10	ENSMUST00000160942.8	2876	4	277	320	-214	-320	multi-exon	FALSE	canonical	2	2	junction_1	4.49691252107735	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATTAAAAAACTG	9490	False	NA	NA	False	NA	NA	NA	57849091	57874085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_57849938_57856302_57856471_57858609_57858735_57872945
tx.6783	chr15	+	1561	2	NNC	ENSMUSG00000051225.10	novel	529	2	NA	NA	-46	-311	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAACTGTTCCCTGGA	NA	False	NA	NA	False	NA	NA	NA	57865495	57874094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_57865908_57872945
tx.6784	chr15	-	1332	6	FSM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	-7	16	3	-5	multi-exon	FALSE	canonical	3	653	junction_4	117.266534015464	484	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTCTCCCAGGTAA	NA	False	NA	NA	False	NA	NA	NA	57897718	57885670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
tx.6785	chr15	-	4757	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	8	-1	8	1	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAATGTGGTCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	57939857	57910699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
tx.6786	chr15	-	5213	5	FSM	ENSMUSG00000022361.15	ENSMUST00000110168.8	5212	5	-6	5	-6	-5	multi-exon	FALSE	canonical	1	2	junction_2	17.7816619020833	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCTTTTGAGTGATTT	NA	False	NA	NA	False	NA	NA	NA	57939891	57910403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_57912182_57915619_57918479_57927450_57927577_57932714_57932826_57939552
tx.6787	chr15	-	5692	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	-7	-1	-7	1	multi-exon	TRUE	canonical	3	283	junction_25	31.7407623492731	614	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57998485	57957440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
tx.6788	chr15	+	1386	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	37	junction_4	11.5516232625549	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2657	False	NA	NA	False	NA	NA	NA	58004769	58022050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
tx.6789	chr15	+	1254	5	FSM	ENSMUSG00000022359.11	ENSMUST00000228761.2	798	5	-37	-419	-22	-2	multi-exon	FALSE	canonical	3	22	junction_3	18.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTTTTGAAGAATC	2638	False	NA	NA	False	NA	NA	NA	58004750	58022048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58016975_58017101_58021297
tx.679	chr1	-	5573	3	NIC	ENSMUSG00000038702.7	novel	5759	2	NA	NA	-13	0	intron_retention	FALSE	canonical	3	7	junction_2	3.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACGTTGTATAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	111792626	111786435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_111791371_111791824_111791962_111792125
tx.6790	chr15	+	5566	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-4	-2	-4	2	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	632	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGAGAGTGTCTAATT	NA	False	NA	NA	False	NA	NA	NA	58287312	58329591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
tx.6791	chr15	+	5432	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	3	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	73.4212486414261	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGAGAGTGTCTAATTT	NA	False	NA	NA	False	NA	NA	NA	58287312	58329592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
tx.6792	chr15	-	3729	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-93	111	15	-111	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	327	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGGTTTTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	58695472	58654228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
tx.6793	chr15	+	3813	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-291	826	-291	-826	multi-exon	FALSE	canonical	3	140	junction_1	0	218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGGGCCAAAAATTTGAA	NA	False	NA	NA	False	NA	NA	NA	58760786	58773413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_58761344_58770157
tx.6794	chr15	-	915	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	18.2181455270914	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	NA	False	NA	NA	NA	58805576	58772822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
tx.6795	chr15	+	662	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	46	-4	-6	4	multi-exon	FALSE	canonical	3	3308	junction_3	178.75557489364	542	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCTGAAGTGTTCTT	2862	False	NA	NA	False	NA	NA	NA	58805650	58811341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
tx.6796	chr15	+	2889	3	NIC	ENSMUSG00000022354.5	novel	704	4	NA	NA	96	4	intron_retention	FALSE	canonical	3	3308	junction_2	30.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCTGAAGTGTTCTT	2964	False	NA	NA	False	NA	NA	NA	58805752	58811341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_58808310_58809200_58809315_58811123
tx.6797	chr15	-	3075	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-98	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.5323674264364	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGATCTTTTAATTTG	2631	False	NA	NA	False	NA	NA	NA	58953952	58815092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_58815980_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
tx.6798	chr15	-	5013	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-78	-7	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	100	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAGTTCTCAGGTCTC	2651	False	NA	NA	False	NA	NA	NA	58953932	58813089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
tx.6799	chr15	-	4825	13	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-80	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	20.5324945716134	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTCAGGTCTCCTTCA	2649	False	NA	NA	False	NA	NA	NA	58953934	58813084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
tx.68	chr1	-	903	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	257	3	-3	-3	multi-exon	FALSE	canonical	3	5309	junction_1	773.772953348289	1806	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCGGAGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	16174629	16171521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
tx.680	chr1	-	982	5	NNC	ENSMUSG00000097648.2	novel	1009	3	NA	NA	-33	-39490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGTGTCTTTAGTATT	NA	False	NA	NA	False	NA	NA	NA	113891897	113858604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_113858740_113865942_113866240_113868043_113868135_113868674_113868785_113891548
tx.6800	chr15	-	2869	15	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	19.7247642959456	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGATCTTTTAATTT	2683	False	NA	NA	False	NA	NA	NA	58953900	58815093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_58815518_58815625_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
tx.6801	chr15	+	2794	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-35	-1	-31	1	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	1387	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	59186894	59203042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
tx.6802	chr15	+	2753	11	NIC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	238.536559042844	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	59186904	59203042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_59187979_59189644_59189898_59193162_59193344_59194715_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
tx.6803	chr15	-	4053	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-20	0	-20	0	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	870	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	59246036	59203845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
tx.6804	chr15	+	1173	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	-40	-11	-2	-1	multi-exon	FALSE	canonical	3	123	junction_4	348.219025608766	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCATGGTCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	59246093	59473532	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
tx.6805	chr15	+	1096	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	-42	0	-2	0	multi-exon	FALSE	canonical	3	776	junction_4	74.7677886674618	375	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	59246093	59473533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
tx.6806	chr15	+	3660	3	FSM	ENSMUSG00000032501.10	ENSMUST00000067543.8	4330	3	121	549	121	-549	multi-exon	FALSE	canonical	3	22	junction_1	4.5	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGAGTTTCCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	59520319	59528399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_59521372_59523327_59523621_59526084
tx.6807	chr15	-	2388	2	NNC	ENSMUSG00000072568.5	novel	5565	2	NA	NA	874	-322	intron_retention	FALSE	canonical	3	5	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTTCCTCTTTACTCTG	NA	False	NA	NA	False	NA	NA	NA	60696055	60691164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_60692121_60694623
tx.6808	chr15	-	5156	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	87	322	87	-322	multi-exon	FALSE	canonical	3	40	junction_1	0	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTTCCTCTTTACTCTG	NA	False	NA	NA	False	NA	NA	NA	60696842	60691164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_60695841_60696362
tx.6809	chr15	+	5696	3	FSM	ENSMUSG00000097493.4	ENSMUST00000180730.3	3074	3	694	-3316	12	173	multi-exon	FALSE	canonical	1	1	junction_1	1.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATCATCTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	60694813	60703815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_60696633_60699180_60699212_60699969
tx.681	chr1	-	3841	4	ISM	ENSMUSG00000026374.15	ENSMUST00000188512.7	656	5	118	-2372	118	1133	intron_retention	FALSE	canonical	3	922	junction_2	31.5629881700422	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGCTGCTGTTTGAA	NA	False	NA	NA	False	NA	NA	NA	118237598	118226246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474
tx.6810	chr15	+	2208	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	140	-10	-33	10	multi-exon	FALSE	canonical	3	22	junction_2	2	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGGGCCAACTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	61857379	61862209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_61857801_61859355_61860128_61861194
tx.6811	chr15	+	2735	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	7.97217382873426	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGCGTGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61909899	62122824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_61910051_61978996_61979315_62021087_62021202_62047315_62047398_62114022_62114147_62114282_62114411_62121006
tx.6812	chr15	-	1850	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-119	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	335.160260174144	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	8620	False	NA	NA	False	NA	NA	NA	63869937	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63869746
tx.6813	chr15	-	1981	13	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-128	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	411.541310198624	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	8611	False	NA	NA	False	NA	NA	NA	63869946	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63869746
tx.6814	chr15	-	1889	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	-119	0	-119	0	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	170	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	8620	False	NA	NA	False	NA	NA	NA	63869937	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
tx.6815	chr15	-	1992	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	337.207589887425	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63932369	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63894418_63894470_63932043
tx.6816	chr15	-	2035	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_10	331.600900217103	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63932368	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63894418_63894470_63932043
tx.6817	chr15	-	2077	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-179	-2	-44	0	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	420	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63932371	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
tx.6818	chr15	-	1862	13	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_12	311.438095775067	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63932388	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932275
tx.6819	chr15	-	2047	12	FSM	ENSMUSG00000022378.15	ENSMUST00000063838.11	3797	12	-95	1845	-65	0	multi-exon	FALSE	canonical	3	62	junction_11	317.474070002523	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63932392	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63932043
tx.682	chr1	-	3110	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	211	3742	31	1130	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	723	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTAGTGTGCTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	118238935	118226249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
tx.6820	chr15	-	2170	14	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	363.626149130341	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63932381	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63894418_63894470_63932043
tx.6821	chr15	-	1993	14	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-146	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_13	319.306700886106	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63932473	63802790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043_63932230_63932415
tx.6822	chr15	-	3820	2	FSM	ENSMUSG00000022378.15	ENSMUST00000226129.2	2614	2	-68	-1138	-18	1138	multi-exon	FALSE	canonical	3	743	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGTAGCATCCGGTGA	NA	False	NA	NA	False	NA	NA	NA	63932345	63890951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_63894470_63932043
tx.6823	chr15	-	6174	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177371.8	6164	28	-11	1	-11	-1	multi-exon	FALSE	canonical	3	82	junction_19	14.5305128081956	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATCTGACATCAGGCC	NA	False	NA	NA	False	NA	NA	NA	64184533	63958706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
tx.6824	chr15	-	4697	27	ISM	ENSMUSG00000022377.17	ENSMUST00000177035.8	3228	28	37158	-1275	-55	364	3prime_fragment	FALSE	canonical	3	36	junction_5	23.2403508003955	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTCTGTCTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	64184577	63960020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
tx.6825	chr15	-	6149	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	-59	-1675	-25	-4	multi-exon	FALSE	canonical	3	46	junction_19	18.359240953674	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGCATCTGACATCAG	NA	False	NA	NA	False	NA	NA	NA	64184547	63958709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
tx.6826	chr15	-	6030	27	ISM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	70044	-1682	-39	-2	3prime_fragment	FALSE	canonical	3	36	junction_5	20.3393183224631	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCATCTGACATCAGGC	NA	False	NA	NA	False	NA	NA	NA	64184561	63958707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
tx.6827	chr15	-	4904	30	NIC	ENSMUSG00000022377.17	novel	4582	31	NA	NA	36	364	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	23.6466758642573	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTCTGTCTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	64254732	63960020	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
tx.6828	chr15	-	6297	30	FSM	ENSMUSG00000022377.17	ENSMUST00000110115.9	4535	30	-79	-1683	-79	-1	multi-exon	FALSE	canonical	3	31	junction_28	25.7623364351316	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATCTGACATCAGGCC	NA	False	NA	NA	False	NA	NA	NA	64254847	63958706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
tx.6829	chr15	+	5352	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	151.690312316448	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATAAGTGCATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	65658886	65745660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_65659096_65682033_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
tx.683	chr1	-	4231	5	FSM	ENSMUSG00000026374.15	ENSMUST00000188512.7	656	5	-1206	-2369	44	1130	multi-exon	FALSE	canonical	3	922	junction_2	75.9584590417684	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTAGTGTGCTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	118238922	118226249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502
tx.6830	chr15	+	5210	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	-1	6	-1	-6	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	608	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	NA	False	NA	NA	NA	65658887	65745659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
tx.6831	chr15	+	5279	23	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	114.718520052236	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATAAGTGCATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	65658886	65745660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
tx.6832	chr15	+	3360	17	ISM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	7	11422	0	93	intron_retention	FALSE	canonical	3	451	junction_16	49.9210313895857	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	65658896	65729678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370
tx.6833	chr15	+	3187	8	ISM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	-18	33635	2	4	5prime_fragment	FALSE	canonical	3	18	junction_5	17.128565471225	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTAATTACTTTCCTG	3832	False	NA	NA	False	NA	NA	NA	66449410	66483469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
tx.6834	chr15	+	3292	9	ISM	ENSMUSG00000072501.6	ENSMUST00000229576.2	5094	22	-50	31949	-30	-4	5prime_fragment	FALSE	canonical	3	13	junction_7	18.8878267675241	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTAATGGCTCTAATTA	3800	False	NA	NA	False	NA	NA	NA	66449378	66483461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476625_66476755_66481374
tx.6835	chr15	+	1520	10	ISM	ENSMUSG00000072501.6	ENSMUST00000229160.2	9383	21	-19	34690	1	1670	5prime_fragment	FALSE	canonical	3	20	junction_9	16.4113781667882	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATAGTTACTTATCCTGT	3831	False	NA	NA	False	NA	NA	NA	66449409	66485135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869
tx.6836	chr15	+	3262	9	FSM	ENSMUSG00000072501.6	ENSMUST00000230882.2	3263	9	1	0	1	0	multi-exon	FALSE	canonical	3	27	junction_5	13.8834433769148	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	3831	False	NA	NA	False	NA	NA	NA	66449409	66483465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
tx.6837	chr15	+	3254	9	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	8	4	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	20.8326666559997	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTAATTACTTTCCTG	3858	False	NA	NA	False	NA	NA	NA	66449436	66483469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469513_66469604_66475875_66476090_66476625_66476755_66481374
tx.6838	chr15	-	2885	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	1	3	0	-3	multi-exon	FALSE	canonical	2	22	junction_13	7.67854152818099	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGTGTCTTTTCCTC	NA	False	NA	NA	False	NA	NA	NA	66841488	66801169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
tx.6839	chr15	-	2261	9	FSM	ENSMUSG00000013846.11	ENSMUST00000229028.2	5732	9	60	3411	10	-1	multi-exon	FALSE	canonical	1	1	junction_4	1.93649167310371	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAACATTTCCCGGAAGT	NA	False	NA	NA	False	NA	NA	NA	67048619	66978134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355_66986207_67000401_67000457_67024891_67025020_67048480
tx.684	chr1	+	1883	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	6	0	6	0	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	386	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGGGACTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	118249574	118261552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
tx.6840	chr15	-	4488	16	NIC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	-29	50	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	5.94194132137525	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCTGTTCCTTGTCC	NA	False	NA	NA	False	NA	NA	NA	68130734	67955562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130516
tx.6841	chr15	+	1933	9	FSM	ENSMUSG00000022332.9	ENSMUST00000022954.7	1887	9	-42	-4	-42	4	multi-exon	FALSE	canonical	3	281	junction_5	27.0277635034792	241	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTGTGTGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	68800226	68965365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
tx.6842	chr15	+	852	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	21	-2	1	2	multi-exon	FALSE	canonical	3	479	junction_2	8	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTCATTGAAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	72962261	72965926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_72962433_72964681_72964809_72965372
tx.6843	chr15	-	12051	7	ISM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	65439	5	-5442	-5	3prime_fragment	TRUE	canonical	3	86	junction_5	5.5876848714134	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATTCCGAAGGTGTCCA	NA	False	NA	NA	False	NA	NA	NA	72991345	72967697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185
tx.6844	chr15	-	11056	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-8	2752	-8	-2752	multi-exon	TRUE	canonical	3	61	junction_13	10.6510302057803	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTCTGAGGCTTCATGT	4436	False	NA	NA	False	NA	NA	NA	73056792	72970444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
tx.6845	chr15	-	4616	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	0	-27	combination_of_known_junctions	FALSE	canonical	3	16	junction_31	58.6938329288105	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTATTAAAAAGGTGGCGC	1677	False	NA	NA	False	NA	NA	NA	73295040	73076977	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
tx.6846	chr15	-	4392	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	2	23	2	-23	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAAAGGTGGCGCCGGG	1679	False	NA	NA	False	NA	NA	NA	73295038	73076973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
tx.6847	chr15	-	4346	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	4	-222	combination_of_known_junctions	FALSE	canonical	3	34	junction_31	46.9187191954075	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAACTGACCTTCATTGC	1681	False	NA	NA	False	NA	NA	NA	73295036	73077172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
tx.6848	chr15	-	4090	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	1	-229	combination_of_known_junctions	FALSE	canonical	1	6	junction_30	42.3057784337895	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGAGCTAACTGACCT	1678	False	NA	NA	False	NA	NA	NA	73295039	73077179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73294857
tx.6849	chr15	-	4208	33	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	0	-230	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	54.0647398379942	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1677	False	NA	NA	False	NA	NA	NA	73295040	73077180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
tx.685	chr1	+	7175	36	NIC	ENSMUSG00000064302.14	novel	7207	37	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	43.3379317288056	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	118317179	118537187	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
tx.6850	chr15	+	5264	23	FSM	ENSMUSG00000036661.15	ENSMUST00000043414.12	5299	23	21	14	21	-14	multi-exon	FALSE	canonical	2	4	junction_14	7.34678205825995	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTGCTTGACTTGGC	NA	False	NA	NA	False	NA	NA	NA	73384429	73444077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
tx.6851	chr15	+	2751	13	ISM	ENSMUSG00000036661.15	ENSMUST00000173292.8	5172	24	-88	24149	24	-9762	5prime_fragment	FALSE	canonical	3	9	junction_4	5.63409758129512	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTTGTATACAATATGA	NA	False	NA	NA	False	NA	NA	NA	73384432	73419799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969
tx.6852	chr15	-	2995	4	ISM	ENSMUSG00000079020.10	ENSMUST00000132607.2	2457	7	9669	-1267	2102	0	3prime_fragment	FALSE	canonical	3	284	junction_3	20.9814733091416	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	NA	False	NA	NA	NA	73458709	73452138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867
tx.6853	chr15	-	6671	7	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	30	1	intron_retention	FALSE	canonical	3	201	junction_6	40.2864741569674	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTGTGTTTATGTCCT	NA	False	NA	NA	False	NA	NA	NA	73517581	73452137	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
tx.6854	chr15	-	4468	8	NIC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_7	37.6183845631741	371	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	NA	False	NA	NA	NA	73517586	73452138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
tx.6855	chr15	-	2061	2	FSM	ENSMUSG00000045281.6	ENSMUST00000064166.5	2144	2	83	0	83	0	multi-exon	FALSE	canonical	2	16	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGCCAACAGCCCAAG	NA	False	NA	NA	False	NA	NA	NA	73579271	73566452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_73568412_73579169
tx.6856	chr15	+	1706	6	FSM	ENSMUSG00000059895.14	ENSMUST00000230177.2	1680	6	-27	1	-27	0	multi-exon	FALSE	canonical	3	26	junction_1	34.6028900527109	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	73596619	73629075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
tx.6857	chr15	+	1735	6	FSM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	-14	1539	-14	0	multi-exon	FALSE	canonical	3	41	junction_1	28.8124972885031	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGAAGAGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	73620208	73629076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_73620315_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
tx.6858	chr15	+	1238	3	ISM	ENSMUSG00000034730.18	ENSMUST00000187639.2	2158	10	13649	0	-132	0	3prime_fragment	FALSE	canonical	3	15	junction_1	2	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTAGTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	74459640	74461314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_74459992_74460152_74460261_74460535
tx.6859	chr15	-	3146	3	FSM	ENSMUSG00000022602.15	ENSMUST00000023268.14	3055	3	-91	0	-89	0	multi-exon	FALSE	canonical	3	30	junction_2	11.5	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	NA	False	NA	NA	NA	74544508	74540931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_74541843_74542028_74542169_74542413
tx.686	chr1	+	7201	37	FSM	ENSMUSG00000064302.14	ENSMUST00000178710.8	7566	37	392	-27	4	2	multi-exon	FALSE	canonical	0	0	junction_25	60.1851310541067	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTTTTGAGTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	118317179	118537189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
tx.6860	chr15	-	3359	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	236	2258	236	-2258	multi-exon	FALSE	canonical	3	23	junction_1	0	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCATGATTCTTCA	NA	False	NA	NA	False	NA	NA	NA	74581148	74576407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_74579714_74581095
tx.6861	chr15	+	1508	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	11	265	11	-265	multi-exon	FALSE	canonical	3	79	junction_1	0	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTGCCGGGGAGGTTCT	4651	False	NA	NA	False	NA	NA	NA	74593063	74596223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_74593657_74595308
tx.6862	chr15	-	669	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	123	-1	123	1	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTGACTTCTGT	899	False	NA	NA	False	NA	NA	NA	74671712	74668721	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
tx.6863	chr15	+	1149	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	-27	0	-27	0	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8360	False	NA	NA	False	NA	NA	NA	74827474	74831180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
tx.6864	chr15	+	1135	4	FSM	ENSMUSG00000022587.15	ENSMUST00000190810.7	924	4	466	-677	-9	1	multi-exon	FALSE	canonical	3	397	junction_1	104.416899441081	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTATGTCCTGGTTGTC	8378	False	NA	NA	False	NA	NA	NA	74827492	74831181	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
tx.6865	chr15	-	862	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187994.7	955	4	93	0	-10	0	multi-exon	FALSE	canonical	3	72	junction_1	7.54247233265651	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTTCTCCATTTTTC	9601	False	NA	NA	False	NA	NA	NA	74869787	74866726	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869727
tx.6866	chr15	-	864	4	NNC	ENSMUSG00000068348.5	novel	408	3	NA	NA	-321	387	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	32.5678778348646	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAAGTCTCTGTTTTTCTT	1031	False	NA	NA	False	NA	NA	NA	75110938	75107058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_75107668_75109440_75109558_75110548_75110631_75110882
tx.6867	chr15	+	3524	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	14	2	9	-2	multi-exon	FALSE	canonical	3	54	junction_1	0	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGCTCTGTTGGG	NA	False	NA	NA	False	NA	NA	NA	75488541	75497147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_75488670_75489892_75491541_75495399
tx.6868	chr15	+	3729	3	FSM	ENSMUSG00000047003.16	ENSMUST00000054555.10	8270	3	9	4532	9	-5	multi-exon	FALSE	canonical	2	8	junction_1	23	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTCCTGTGCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	75488541	75497144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_75488878_75489892_75491541_75495399
tx.6869	chr15	+	3401	2	ISM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	1362	0	1315	0	3prime_fragment	FALSE	canonical	3	54	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGCTCTGTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	75489889	75497149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_75491541_75495399
tx.687	chr1	+	9264	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	1	4	1	-4	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1094	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	NA	False	NA	NA	NA	118555676	118612894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
tx.6870	chr15	-	2059	15	NNC	ENSMUSG00000000934.10	novel	1903	14	NA	NA	10	59	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	32.3075147636596	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCTGAGCATGGCCTGA	NA	False	NA	NA	False	NA	NA	NA	75550639	75528824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547305_75547413_75547867_75547981_75550501
tx.6871	chr15	-	1903	14	FSM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	4	-4	4	4	multi-exon	FALSE	canonical	3	71	junction_8	11.6872458678823	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCACTGTGACCTAG	NA	False	NA	NA	False	NA	NA	NA	75550645	75528879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
tx.6872	chr15	+	3366	15	FSM	ENSMUSG00000022580.14	ENSMUST00000121137.9	3360	15	-7	1	-7	-1	multi-exon	FALSE	canonical	1	1	junction_2	2.36578502309703	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCATTACATGATAATCA	NA	False	NA	NA	False	NA	NA	NA	75576121	75587333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_75576324_75580019_75580136_75580837_75580967_75581085_75581162_75581862_75581941_75582303_75582429_75582514_75582682_75582836_75583031_75583402_75583560_75583639_75583748_75584105_75584301_75584850_75584928_75585067_75585215_75585298_75585461_75585900
tx.6873	chr15	-	3373	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	-12	1	-12	-1	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGCCTGTCTTGACTAC	NA	False	NA	NA	False	NA	NA	NA	75713776	75626279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
tx.6874	chr15	+	1850	11	FSM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	-60	2	-60	-2	multi-exon	FALSE	canonical	3	30	junction_2	7.7614431647729	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGTTGAGGGGTAC	NA	False	NA	NA	False	NA	NA	NA	75734115	75739255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
tx.6875	chr15	+	2926	9	NIC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	41	junction_1	5.42995165724337	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGTTGAGGGGTAC	NA	False	NA	NA	False	NA	NA	NA	75734166	75739255	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_75734331_75735253_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
tx.6876	chr15	-	1433	5	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	26.2916336502698	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTCCCATCAGATCCT	NA	False	NA	NA	False	NA	NA	NA	75754363	75741182	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75748129_75748389_75754245
tx.6877	chr15	-	2752	4	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGCTGAATAAACCCTT	NA	False	NA	NA	False	NA	NA	NA	75754364	75739605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
tx.6878	chr15	-	2521	2	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTTTGACTGGAGTC	NA	False	NA	NA	False	NA	NA	NA	75754362	75751118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_75753523_75754245
tx.6879	chr15	-	980	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	49	1283	0	0	multi-exon	FALSE	canonical	3	2715	junction_5	241.1927842695	600	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	NA	False	NA	NA	NA	75781155	75767336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
tx.688	chr1	-	6596	13	NIC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-62	3	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	30.4743744808651	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTGATCTGCTTTTC	1167	False	NA	NA	False	NA	NA	NA	118981411	118761858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118929769_118929937_118981031
tx.6880	chr15	-	1295	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	47	-3	47	3	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGACTTTAGTAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	75793362	75788322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
tx.6881	chr15	-	1341	11	FSM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	182	junction_10	87.2147349935778	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8913	False	NA	NA	False	NA	NA	NA	75801608	75796531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
tx.6882	chr15	-	1280	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	68	7	4	0	multi-exon	FALSE	canonical	3	225	junction_10	74.8304750753328	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8908	False	NA	NA	False	NA	NA	NA	75801613	75796531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
tx.6883	chr15	+	2400	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	88	-2	88	2	multi-exon	FALSE	canonical	3	106	junction_1	0	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTAATTGGCATATC	NA	False	NA	NA	False	NA	NA	NA	75812888	75821251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_75813009_75818971
tx.6884	chr15	+	1766	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	34	3	-1	0	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGAAGCCTGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	75841005	75847595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
tx.6885	chr15	-	4568	5	FSM	ENSMUSG00000046761.14	ENSMUST00000170153.2	4534	5	-41	7	-41	-7	multi-exon	FALSE	canonical	1	3	junction_2	2.06155281280883	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGATCCCAAGCCTCA	7381	False	NA	NA	False	NA	NA	NA	75881388	75872948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75876599_75876789_75876915_75876983_75877149_75877949_75878412_75881222
tx.6886	chr15	-	5506	37	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	13	-5	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	77.9983529028374	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	75941590	75919011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
tx.6887	chr15	-	5427	36	FSM	ENSMUSG00000022568.18	ENSMUST00000063747.12	5440	36	8	5	8	-5	multi-exon	FALSE	canonical	3	271	junction_30	52.1302607094253	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	75941595	75919011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
tx.6888	chr15	-	1819	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	4	-2	-4	2	multi-exon	FALSE	canonical	3	1143	junction_7	140.604729650179	724	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGTCCCTGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	75952757	75942036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
tx.6889	chr15	-	3229	18	FSM	ENSMUSG00000075590.5	ENSMUST00000228366.3	3192	18	-108	71	-108	5	multi-exon	FALSE	canonical	0	0	junction_3	2.12091251497882	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTCTGACATAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	75963584	75957437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75960713_75960847_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962136_75962301_75962392_75962486_75962589_75962656_75962780_75963219
tx.689	chr1	-	6723	14	FSM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	-84	-2	-84	2	multi-exon	FALSE	canonical	3	89	junction_11	11.3908506833309	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGTTGATCTGCTTTT	1145	False	NA	NA	False	NA	NA	NA	118981433	118761859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
tx.6890	chr15	-	9872	2	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	14732	-2	7065	0	3prime_fragment	FALSE	canonical	3	60	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	6388	False	NA	NA	False	NA	NA	NA	76065178	76055173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_76062586_76062718
tx.6891	chr15	+	1743	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	-15	-3	-4	3	multi-exon	FALSE	canonical	3	70	junction_1	10.0567832276971	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTCTCCTTGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	76130959	76134107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
tx.6892	chr15	-	4512	26	ISM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	-13	0	-13	0	intron_retention	TRUE	canonical	2	7	junction_11	7.11550419857933	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9170	False	NA	NA	False	NA	NA	NA	76191458	76180802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674
tx.6893	chr15	-	4010	27	FSM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	-40	0	-40	0	multi-exon	FALSE	canonical	2	7	junction_11	7.05305339056621	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9143	False	NA	NA	False	NA	NA	NA	76191485	76180802	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
tx.6894	chr15	+	1736	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	54	6	-14	-2	multi-exon	FALSE	canonical	0	0	junction_1	330.5	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCACTGGACTAATGTC	933	False	NA	NA	False	NA	NA	NA	76211650	76214871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76211864_76213229_76213437_76213555
tx.6895	chr15	+	3089	2	NIC	ENSMUSG00000034259.9	novel	1728	3	NA	NA	3	2	intron_retention	FALSE	canonical	3	661	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGACTAATGTCTTCT	950	False	NA	NA	False	NA	NA	NA	76211667	76214875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76213437_76213555
tx.6896	chr15	+	2481	9	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-28	2	intron_retention	TRUE	canonical	3	245	junction_2	20.9030500166842	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4798	False	NA	NA	False	NA	NA	NA	76215515	76219100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76218091_76218213_76218405_76218489_76218661_76218781
tx.6897	chr15	+	1185	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	10	325	0	3	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	960	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	NA	False	NA	NA	NA	76227732	76230135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
tx.6898	chr15	+	1794	6	FSM	ENSMUSG00000022551.9	ENSMUST00000229710.2	1791	6	0	-3	0	3	multi-exon	FALSE	canonical	3	4240	junction_4	274.648866737149	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	NA	False	NA	NA	NA	76227732	76230135	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
tx.6899	chr15	-	1694	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	40	0	4	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8153	False	NA	NA	False	NA	NA	NA	76235271	76231239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
tx.69	chr1	+	2872	6	FSM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	-470	1185	-470	2	multi-exon	FALSE	canonical	2	4	junction_1	4.02988833592198	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGGTTATTAGCTAT	NA	False	NA	NA	False	NA	NA	NA	16175527	16202773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_16176531_16178018_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
tx.690	chr1	-	3612	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	645	-2	645	2	multi-exon	FALSE	canonical	3	45	junction_1	0	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCCTTGTGTGATGTC	NA	False	NA	NA	False	NA	NA	NA	119349333	119343192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_119345828_119348356
tx.6900	chr15	+	1726	9	FSM	ENSMUSG00000022553.17	ENSMUST00000161527.8	1743	9	19	-2	4	1	multi-exon	FALSE	canonical	3	22	junction_1	277.590075471008	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAACCTGGGAGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	76235512	76238574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76235860_76236195_76236242_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
tx.6901	chr15	+	1679	8	FSM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	7	0	4	0	multi-exon	FALSE	canonical	3	425	junction_1	86.5157765487702	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	76235512	76238573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
tx.6902	chr15	+	1632	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	19	0	4	0	multi-exon	FALSE	canonical	3	203	junction_1	163.413086179455	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	76235512	76238573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
tx.6903	chr15	+	2375	6	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	6	417	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	27.9184526791869	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCACCGTGTAGACTAGT	3550	False	NA	NA	False	NA	NA	NA	76253103	76256054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76253741_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
tx.6904	chr15	+	2401	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	7	-415	7	415	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTCACCGTGTAGACTA	3551	False	NA	NA	False	NA	NA	NA	76253104	76256052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
tx.6905	chr15	+	2323	6	NNC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	8	419	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	42.1454623892063	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCGTGTAGACTAGTGT	3552	False	NA	NA	False	NA	NA	NA	76253105	76256056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_76253741_76253851_76253901_76254055_76254155_76254361_76254454_76254531_76254655_76254731
tx.6906	chr15	+	2151	4	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	23	-4	intron_retention	FALSE	canonical	3	106	junction_2	1.69967317119759	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCCAGACTCTCCTGCA	3567	False	NA	NA	False	NA	NA	NA	76253120	76255633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76254155_76254361_76254454_76254531_76254655_76254731
tx.6907	chr15	+	5262	44	FSM	ENSMUSG00000022558.17	ENSMUST00000096385.11	5268	44	6	0	-4	0	multi-exon	FALSE	canonical	3	62	junction_5	19.8740490552834	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	NA	False	NA	NA	NA	76264718	76337238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
tx.6908	chr15	-	2492	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	-2	1	-2	-1	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	521	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGGCTGGCAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	76361479	76337189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
tx.6909	chr15	-	2068	13	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	21269	1	20	-1	3prime_fragment	FALSE	canonical	3	559	junction_11	47.8576448090236	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGGCTGGCAGCAGAG	10007	False	NA	NA	False	NA	NA	NA	76340208	76337189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071
tx.691	chr1	-	2233	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	52	4	52	-4	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	1590	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTTCGCCCTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	119432472	119398038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
tx.6910	chr15	+	2116	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-29	-3	-6	3	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATATATAT	7115	False	NA	NA	False	NA	NA	NA	76361615	76385175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
tx.6911	chr15	+	2047	12	FSM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	-27	-2	-4	2	multi-exon	FALSE	canonical	3	46	junction_10	77.0148638653497	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATATATA	7117	False	NA	NA	False	NA	NA	NA	76361617	76385174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
tx.6912	chr15	+	2175	14	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	103.530403161092	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATATAT	7138	False	NA	NA	False	NA	NA	NA	76361638	76385173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384397_76384466_76384537_76384616
tx.6913	chr15	-	1988	15	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	57	1	intron_retention	FALSE	canonical	3	155	junction_14	22.9658131018384	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGGGGTTGTGGAGGCT	NA	False	NA	NA	False	NA	NA	NA	76396094	76386213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
tx.6914	chr15	-	1751	17	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	48.5218620185788	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	NA	False	NA	NA	NA	76396084	76386214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387202_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
tx.6915	chr15	-	1902	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	-14	0	-12	0	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	NA	False	NA	NA	NA	76396165	76386214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
tx.6916	chr15	-	2107	7	FSM	ENSMUSG00000022559.9	ENSMUST00000229813.2	2091	7	-9	-7	-9	-2	multi-exon	TRUE	canonical	3	158	junction_6	11.5325625946708	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	NA	False	NA	NA	NA	76422955	76419922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922
tx.6917	chr15	-	1977	8	FSM	ENSMUSG00000022559.9	ENSMUST00000230513.2	1953	8	-20	-4	-9	-2	multi-exon	FALSE	canonical	3	133	junction_7	19.025224930956	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	NA	False	NA	NA	NA	76422955	76419922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
tx.6918	chr15	-	1728	9	FSM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	-20	2	-9	-2	multi-exon	FALSE	canonical	3	128	junction_8	22.8988946239769	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	NA	False	NA	NA	NA	76422955	76419922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
tx.6919	chr15	+	2079	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	-1	3211	-1	-733	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCCCATGAGCACAGCT	NA	False	NA	NA	False	NA	NA	NA	76423030	76425597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
tx.692	chr1	-	6510	25	NIC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-7	5	combination_of_known_junctions	FALSE	canonical	2	7	junction_24	18.7778959151445	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATGAGCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	119576361	119472761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576146
tx.6920	chr15	+	1995	15	FSM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	41	4	-6	3	multi-exon	FALSE	canonical	3	114	junction_10	17.9268638913668	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCGTTTTCTTTGTGTT	3143	False	NA	NA	False	NA	NA	NA	76460598	76480012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
tx.6921	chr15	-	4477	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	39	2	39	1	multi-exon	TRUE	canonical	3	484	junction_25	49.8187687746518	632	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	76491752	76480007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
tx.6922	chr15	-	2242	12	FSM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	514	-6	-22	-2	multi-exon	FALSE	canonical	3	334	junction_11	41.2272476696326	279	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8644	False	NA	NA	False	NA	NA	NA	76501070	76496584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
tx.6923	chr15	-	902	10	FSM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	9	0	4	0	multi-exon	TRUE	canonical	3	892	junction_9	85.8889607589177	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9612	False	NA	NA	False	NA	NA	NA	76510265	76506308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
tx.6924	chr15	-	4218	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	18	-1	-11	1	multi-exon	FALSE	canonical	3	178	junction_21	25.6881606970994	169	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	NA	False	NA	NA	NA	76524140	76510436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
tx.6925	chr15	-	3818	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-12	-386	combination_of_known_junctions	TRUE	canonical	3	230	junction_1	231.34534070663	314	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCAAGTGTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	76541132	76527980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
tx.6926	chr15	-	7882	3	ISM	ENSMUSG00000053929.18	ENSMUST00000081291.13	3959	5	6243	388	2898	-388	3prime_fragment	FALSE	canonical	3	230	junction_1	269.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAGCAAGTGTTTTTA	732	False	NA	NA	False	NA	NA	NA	76538018	76527982	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_76530775_76532298_76532511_76533140
tx.6927	chr15	-	1787	4	FSM	ENSMUSG00000053929.18	ENSMUST00000229524.2	1513	4	-215	-59	-11	4	multi-exon	FALSE	canonical	3	120	junction_1	282.269768523344	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTATCCTGTCTGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	76541131	76531131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76531896_76532298_76532511_76533140_76533380_76540559
tx.6928	chr15	-	1864	4	FSM	ENSMUSG00000053929.18	ENSMUST00000176274.2	1854	4	-12	2	-12	-2	multi-exon	FALSE	canonical	3	306	junction_1	196.445638508186	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGTGTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	76541132	76531128	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76531969_76532298_76532511_76533140_76533380_76540559
tx.6929	chr15	-	9041	3	FSM	ENSMUSG00000053929.18	ENSMUST00000229552.2	2933	3	-6100	-8	-8	-1	multi-exon	FALSE	canonical	3	306	junction_1	231.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCTGTGTGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	76541128	76531127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76531969_76532298_76532511_76533140
tx.693	chr1	-	6463	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-17	-4	-17	4	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTATGAGCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	119576683	119472762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
tx.6930	chr15	+	3330	19	NNC	ENSMUSG00000004187.12	novel	3218	18	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	4.46280927966529	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTGGTGTTTTAA	5028	False	NA	NA	False	NA	NA	NA	76544075	76552396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
tx.6931	chr15	-	1692	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	69	-396	69	396	multi-exon	FALSE	canonical	3	304	junction_2	19.5	266	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTCTGGTATTGGGG	NA	False	NA	NA	False	NA	NA	NA	76554079	76552028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76553341_76553428_76553534_76553804
tx.6932	chr15	+	2820	12	FSM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	7	0	7	0	multi-exon	TRUE	canonical	3	37	junction_1	32.5360575565374	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	NA	False	NA	NA	NA	76555853	76579119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
tx.6933	chr15	+	2646	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	46	0	14	0	multi-exon	FALSE	canonical	3	82	junction_1	16.1864140562386	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	NA	False	NA	NA	NA	76555860	76579119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
tx.6934	chr15	+	2162	10	ISM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	18906	1	24	-1	3prime_fragment	FALSE	canonical	3	96	junction_3	12.1817511765918	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	NA	False	NA	NA	NA	76574752	76579118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
tx.6935	chr15	-	3921	22	FSM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	-25	0	-10	0	multi-exon	FALSE	canonical	3	37	junction_12	16.3579572820053	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTCTGGTAACATAG	NA	False	NA	NA	False	NA	NA	NA	76594758	76587752	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
tx.6936	chr15	+	2876	4	FSM	ENSMUSG00000033728.15	ENSMUST00000137649.8	2832	4	0	-44	0	-2	multi-exon	FALSE	canonical	3	40	junction_1	33.8066397160216	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTGCCCCCTAGTCT	NA	False	NA	NA	False	NA	NA	NA	76594842	76599328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76595731_76597066_76597421_76597600_76598186_76598279
tx.6937	chr15	+	2416	5	NIC	ENSMUSG00000033728.15	novel	2832	4	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	41.7282877674126	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTGCTTTATCATGAC	NA	False	NA	NA	False	NA	NA	NA	76594841	76599295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_76595128_76595555_76595731_76597066_76597421_76597600_76598186_76598279
tx.6938	chr15	+	2235	4	FSM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	5	2609	0	-1	multi-exon	FALSE	canonical	3	39	junction_1	34.1792659696229	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGTGTTGCTTTATC	NA	False	NA	NA	False	NA	NA	NA	76594842	76599290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76595128_76597066_76597421_76597600_76598186_76598279
tx.6939	chr15	-	1752	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	2	0	2	0	multi-exon	FALSE	canonical	3	37	junction_1	1	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATTGACTTTAAATGA	9311	False	NA	NA	False	NA	NA	NA	76608038	76605664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76607184_76607370_76607420_76607854
tx.694	chr1	-	10514	24	NIC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	-128	-3	combination_of_known_splicesites	TRUE	canonical	1	2	junction_19	16.2450515949704	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTCGTTTCAAGGT	NA	False	NA	NA	False	NA	NA	NA	119765205	119580199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
tx.6940	chr15	-	4589	12	FSM	ENSMUSG00000033697.17	ENSMUST00000239003.2	4587	12	-2	0	-2	0	multi-exon	FALSE	canonical	3	33	junction_5	14.9749101461177	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8167	False	NA	NA	False	NA	NA	NA	76702372	76608184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
tx.6941	chr15	-	4494	11	FSM	ENSMUSG00000033697.17	ENSMUST00000239134.2	4494	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	15.2761251631426	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8169	False	NA	NA	False	NA	NA	NA	76702370	76608184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
tx.6942	chr15	-	5874	6	FSM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	-33	-1696	8	1696	multi-exon	FALSE	canonical	3	56	junction_1	12.3353151560874	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCATACCTACAGAAGTAT	8177	False	NA	NA	False	NA	NA	NA	76702362	76615960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
tx.6943	chr15	-	4007	4	FSM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	29	0	2	0	multi-exon	FALSE	canonical	3	11	junction_3	4.24264068711928	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTGTAGTGATGGT	NA	False	NA	NA	False	NA	NA	NA	76755606	76735808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852
tx.6944	chr15	+	2751	5	FSM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	21	0	21	0	multi-exon	FALSE	canonical	3	69	junction_1	13.4976849866931	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	76763479	76776595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76774206
tx.6945	chr15	+	2966	5	FSM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	0	-6	0	0	multi-exon	FALSE	canonical	3	16	junction_1	32.962099447699	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	76763508	76776595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76763798_76764938_76764983_76765311_76765439_76772430_76772548_76774206
tx.6946	chr15	+	3867	4	ISM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	287	3	211	3	3prime_fragment	FALSE	canonical	3	76	junction_3	12.3558353285671	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTAGCCTGTACTTT	NA	False	NA	NA	False	NA	NA	NA	76763745	76776592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_76764983_76765311_76765439_76772430_76772548_76774206
tx.6947	chr15	+	1024	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	13	0	13	0	multi-exon	TRUE	canonical	3	114	junction_1	0	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	False	NA	NA	False	NA	NA	NA	76784122	76785505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76784193_76784551
tx.6948	chr15	+	1048	2	FSM	ENSMUSG00000055041.9	ENSMUST00000109793.3	920	2	-14	-114	12	0	multi-exon	FALSE	canonical	3	59	junction_1	0	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	False	NA	NA	False	NA	NA	NA	76784121	76785505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76784216_76784551
tx.6949	chr15	+	844	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	5	2	5	-2	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	1848	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGCGTGTGTGAGCCT	NA	False	NA	NA	False	NA	NA	NA	76788282	76790512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
tx.695	chr1	-	10785	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	86	3	86	-3	multi-exon	TRUE	canonical	3	29	junction_24	12.095832819514	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTCGTTTCAAGGT	NA	False	NA	NA	False	NA	NA	NA	119765257	119580199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
tx.6950	chr15	-	2520	5	FSM	ENSMUSG00000054967.8	ENSMUST00000229055.2	2212	5	-148	-160	-148	160	multi-exon	FALSE	canonical	3	11	junction_4	6.04152298679729	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGCCAAATATTCTGAA	8337	False	NA	NA	False	NA	NA	NA	76809796	76794410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76809575
tx.6951	chr15	-	2515	7	NNC	ENSMUSG00000054967.8	novel	644	6	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	10.0567832276971	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGGCTCTGAGTTTG	8495	False	NA	NA	False	NA	NA	NA	76809638	76794571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805048_76805227_76805315_76805452_76809575
tx.6952	chr15	+	1053	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	-7	-3	-7	0	multi-exon	TRUE	canonical	1	74	junction_2	101.489839392917	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	76832698	76834932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
tx.6953	chr15	+	1104	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	10	-3	3	0	multi-exon	FALSE	canonical	1	74	junction_1	105.909814884594	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	76832731	76834932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
tx.6954	chr15	-	6060	10	ISM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	39943	-4810	18969	0	3prime_fragment	FALSE	canonical	3	120	junction_5	25.9591321736663	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	NA	False	NA	NA	NA	76998011	76963189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804
tx.6955	chr15	-	6546	13	FSM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	-43	-4809	-11	0	multi-exon	FALSE	canonical	2	23	junction_12	49.6258221314491	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	NA	False	NA	NA	NA	77037997	76963190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
tx.6956	chr15	-	6495	13	NIC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	-141	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	50.3412659311976	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	NA	False	NA	NA	NA	77087777	76963189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77087561
tx.6957	chr15	-	6905	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	44.7278033094505	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	NA	False	NA	NA	NA	77191189	76963189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
tx.6958	chr15	-	6885	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	NA	False	NA	NA	NA	77191119	76963190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
tx.6959	chr15	-	1539	2	ISM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	79114	1	4129	-1	3prime_fragment	FALSE	canonical	3	518	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	77647261	77644787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_77646217_77647151
tx.696	chr1	-	4353	20	NNC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	-3377	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	16.2714167413315	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCCCCCTATTCTGA	NA	False	NA	NA	False	NA	NA	NA	119672543	119585770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119672174
tx.6960	chr15	-	3063	11	ISM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	73171	1	775	-1	3prime_fragment	FALSE	canonical	3	492	junction_10	41.4709536905049	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	6642	False	NA	NA	False	NA	NA	NA	77653204	77644787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991
tx.6961	chr15	-	3495	14	ISM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	72271	1	-125	-1	3prime_fragment	TRUE	canonical	3	473	junction_13	42.7314442929437	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	5742	False	NA	NA	False	NA	NA	NA	77654104	77644787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966
tx.6962	chr15	-	7413	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	19	1	19	-1	multi-exon	TRUE	canonical	3	307	junction_27	78.3427565254121	473	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	77726356	77644787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
tx.6963	chr15	-	1277	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	20	1	11	-1	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	659	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGCTGTTCTGTGGG	2735	False	NA	NA	False	NA	NA	NA	77813186	77799247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
tx.6964	chr15	-	4893	9	FSM	ENSMUSG00000016552.14	ENSMUST00000117725.2	4347	9	-52	-494	-5	1	multi-exon	FALSE	canonical	3	12	junction_8	16.6203000875435	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGCTCTGGCATTT	8654	False	NA	NA	False	NA	NA	NA	77840927	77824724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840668
tx.6965	chr15	-	4796	9	FSM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	-6	3	-6	1	multi-exon	TRUE	canonical	3	38	junction_8	9.62337648645214	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGCTCTGGCATTT	8653	False	NA	NA	False	NA	NA	NA	77840928	77824724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
tx.6966	chr15	-	3352	4	ISM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	8298	3	-2536	1	3prime_fragment	FALSE	canonical	3	41	junction_1	9.46337971105226	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGCTCTGGCATTT	9519	False	NA	NA	False	NA	NA	NA	77832624	77824724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553
tx.6967	chr15	-	5034	8	ISM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	233	3	186	1	3prime_fragment	FALSE	canonical	3	41	junction_1	7.70369643583586	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGCTCTGGCATTT	8892	False	NA	NA	False	NA	NA	NA	77840689	77824724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788
tx.6968	chr15	-	1860	15	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	92	-3	combination_of_known_junctions	FALSE	canonical	3	103	junction_14	427.115718201396	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	3005	False	NA	NA	False	NA	NA	NA	77854753	77843200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854658
tx.6969	chr15	-	1887	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	9	3	-7	-3	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	1894	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2754	False	NA	NA	False	NA	NA	NA	77855004	77843200	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
tx.697	chr1	-	3290	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	37	14	37	-14	multi-exon	FALSE	canonical	3	113	junction_1	0	154	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATCCA	NA	False	NA	NA	False	NA	NA	NA	119840901	119835633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_119838885_119840862
tx.6970	chr15	-	1005	7	FSM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	8	0	8	0	multi-exon	FALSE	canonical	0	0	junction_3	104.002270274366	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	False	NA	NA	False	NA	NA	NA	78058299	78043662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
tx.6971	chr15	-	1164	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	-21	1	-21	-1	multi-exon	FALSE	canonical	3	371	junction_1	0	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTCTGCCTCCTTGCC	8063	False	NA	NA	False	NA	NA	NA	78290128	78283756	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_78284231_78289438
tx.6972	chr15	+	1261	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	57	-7	57	0	multi-exon	FALSE	canonical	3	16	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGGTTGTGAGAATG	NA	False	NA	NA	False	NA	NA	NA	78294238	78298213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78294865_78297578
tx.6973	chr15	+	2806	6	ISM	ENSMUSG00000033287.18	ENSMUST00000162517.9	901	8	67	-806	3	0	intron_retention	FALSE	canonical	1	3	junction_5	48.5691259958423	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	NA	False	NA	NA	NA	78312830	78323503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321357
tx.6974	chr15	+	1445	6	FSM	ENSMUSG00000033287.18	ENSMUST00000159771.8	986	6	-14	-445	-14	-15	multi-exon	FALSE	canonical	3	32	junction_5	37.5819105421744	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTGGCTGCCACCCTT	NA	False	NA	NA	False	NA	NA	NA	78312847	78323488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78322686
tx.6975	chr15	+	3035	6	ISM	ENSMUSG00000033287.18	ENSMUST00000089414.12	1180	7	29	-392	-5	-2	intron_retention	FALSE	canonical	3	64	junction_5	26.081411004775	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTTTTTCTCTGGGCCA	NA	False	NA	NA	False	NA	NA	NA	78312856	78323501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100
tx.6976	chr15	+	4247	5	FSM	ENSMUSG00000033287.18	ENSMUST00000161016.8	750	5	-55	-3442	8	-1	multi-exon	FALSE	canonical	3	98	junction_2	15.305227865014	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTTTCTCTGGGCCAC	NA	False	NA	NA	False	NA	NA	NA	78312835	78323502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784
tx.6977	chr15	-	1362	7	FSM	ENSMUSG00000033220.8	ENSMUST00000043214.8	3038	7	-6	1682	-6	1046	multi-exon	FALSE	canonical	3	13	junction_3	5.64702478203247	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTGCAGTGAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	78456989	78445048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_78445686_78446105_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
tx.6978	chr15	-	1745	6	NIC	ENSMUSG00000033220.8	novel	3038	7	NA	NA	4	1021	intron_retention	FALSE	canonical	3	13	junction_2	6.04648658313239	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATGTGTTGATTCT	NA	False	NA	NA	False	NA	NA	NA	78456977	78445073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
tx.6979	chr15	-	1889	8	FSM	ENSMUSG00000018169.13	ENSMUST00000018313.6	1865	8	-24	0	-24	0	multi-exon	FALSE	canonical	3	144	junction_5	11.4749060731561	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	78657699	78640081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
tx.698	chr1	-	887	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	294	130	294	-130	multi-exon	FALSE	canonical	3	40	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCCTACGGTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	120001510	119995236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_119996055_120001441
tx.6980	chr15	-	4158	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.3416960065244	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGACCTTATGCTTGC	NA	False	NA	NA	False	NA	NA	NA	78687244	78659335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_78660145_78660716_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
tx.6981	chr15	-	4670	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	-4	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.3416960065244	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCTTATGCTTGCTTCC	NA	False	NA	NA	False	NA	NA	NA	78687246	78659331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_78660123_78660188_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
tx.6982	chr15	-	1667	5	NNC	ENSMUSG00000033170.15	novel	3220	20	NA	NA	12003	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.8797106092495	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGACCTTATGCTTGC	7836	False	NA	NA	False	NA	NA	NA	78662712	78659335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_78660145_78660716_78661031_78661664_78661778_78662158_78662275_78662397
tx.6983	chr15	-	4030	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	134	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.4962267355737	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTGCTTCCATGCCTG	NA	False	NA	NA	False	NA	NA	NA	78687108	78659324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_78660145_78660716_78661031_78661664_78661775_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
tx.6984	chr15	-	4659	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4962267355737	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGACCTTATGCTTGC	NA	False	NA	NA	False	NA	NA	NA	78687242	78659335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_78660123_78660188_78661031_78661664_78661775_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
tx.6985	chr15	+	2558	3	FSM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	2	0	2	0	multi-exon	FALSE	canonical	3	20	junction_1	1.5	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGACCTTGGGGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	78726825	78735097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78726926_78731294_78732020_78733364
tx.6986	chr15	+	2690	17	FSM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	344	0	-17	0	multi-exon	TRUE	canonical	3	379	junction_6	54.6157028701453	683	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	NA	False	NA	NA	NA	78761733	78778785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
tx.6987	chr15	+	2969	15	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	351	0	-10	0	intron_retention	FALSE	canonical	3	379	junction_6	56.300804721113	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	NA	False	NA	NA	NA	78761740	78778785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366
tx.6988	chr15	+	2513	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	-135	-3	0	-1	multi-exon	FALSE	canonical	3	356	junction_17	50.4832700370451	537	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAACTGGCCAAACGAAA	4398	False	NA	NA	False	NA	NA	NA	78783967	78796250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
tx.6989	chr15	+	1997	2	FSM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	4	0	4	0	multi-exon	FALSE	canonical	3	228	junction_1	0	339	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTGTGTGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	78798122	78803717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78798732_78802329
tx.699	chr1	-	544	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	15	10	15	0	multi-exon	FALSE	canonical	3	2709	junction_1	24.2532930181083	497	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGTTACTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	120048793	120041019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
tx.6990	chr15	+	529	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	2	269	1	5	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCCTTTCATGGGAGA	NA	False	NA	NA	False	NA	NA	NA	78810926	78814396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
tx.6991	chr15	+	945	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	3	2773	3	1	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	78819135	78825065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
tx.6992	chr15	+	1401	7	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	219.064424821152	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	78819389	78825065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_78819895_78820008_78820100_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
tx.6993	chr15	+	2554	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	21	-5	-15	0	multi-exon	FALSE	canonical	3	125	junction_8	26.3687999246734	332	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGATGCTGGGCTT	NA	False	NA	NA	False	NA	NA	NA	78867261	78890069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
tx.6994	chr15	+	1473	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	6	891	6	-891	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	983	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCAGTCTGCTTTATTC	638	False	NA	NA	False	NA	NA	NA	78915079	78921662	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
tx.6995	chr15	-	1916	8	FSM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	-18	6	-10	4	multi-exon	FALSE	canonical	3	102	junction_6	6.03391773769796	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTGTTGTTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	78947103	78937299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
tx.6996	chr15	+	1908	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	29	5	29	-5	multi-exon	FALSE	canonical	3	1651	junction_4	129.272537257102	1682	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTGTGGTCTCATT	NA	False	NA	NA	False	NA	NA	NA	78959407	78978600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
tx.6997	chr15	+	3874	16	FSM	ENSMUSG00000033039.11	ENSMUST00000040320.10	6712	16	-65	2903	1	513	multi-exon	FALSE	canonical	3	16	junction_2	11.2514690398879	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTTGGTAGTCTCTCC	5966	False	NA	NA	False	NA	NA	NA	78993098	79018197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
tx.6998	chr15	+	3972	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	22	687	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	13.4994212838921	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCACCTGTGTCCTGTCA	5987	False	NA	NA	False	NA	NA	NA	78993119	79018371	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009688_79009742_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
tx.6999	chr15	+	554	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	329	2	-13	-2	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	397	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCGTTACCTGCGTGC	NA	False	NA	NA	False	NA	NA	NA	79025537	79035972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
tx.7	chr1	+	1935	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	33	81	3	29	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	409	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTTAAATTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	5153335	5232671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
tx.70	chr1	-	3243	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	-50	714	9	-2	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCACTGCTCATTTATA	NA	False	NA	NA	False	NA	NA	NA	16589521	16414423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
tx.700	chr1	-	2777	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	-15	-10	-15	10	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATTGTCCTTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	120193029	120154142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
tx.7000	chr15	+	3423	11	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	13	-2	intron_retention	FALSE	canonical	3	173	junction_8	27.9730227183263	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4396	False	NA	NA	False	NA	NA	NA	79113594	79133664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79130312_79130607_79130701_79131464_79132497_79132920
tx.7001	chr15	+	1966	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	11	0	11	0	multi-exon	FALSE	canonical	3	173	junction_9	26.1878894826512	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4394	False	NA	NA	False	NA	NA	NA	79113592	79133666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
tx.7002	chr15	-	3546	17	FSM	ENSMUSG00000042632.18	ENSMUST00000174021.8	3318	17	-228	0	11	0	multi-exon	FALSE	canonical	3	78	junction_16	39.721638860324	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	79212392	79170427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
tx.7003	chr15	-	3387	16	FSM	ENSMUSG00000042632.18	ENSMUST00000166977.9	3365	16	-22	0	5	0	multi-exon	FALSE	canonical	3	30	junction_8	51.9652020319581	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	79212398	79170427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
tx.7004	chr15	-	2942	16	FSM	ENSMUSG00000042632.18	ENSMUST00000047816.15	2963	16	21	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_15	63.160817671155	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	79212407	79170427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
tx.7005	chr15	-	3182	18	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	55.3629733985577	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	79212402	79170427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212288
tx.7006	chr15	-	3117	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	53.1124617556935	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	79212417	79170427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
tx.7007	chr15	-	3030	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_16	39.5790348543266	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	79212451	79170427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
tx.7008	chr15	+	1987	3	FSM	ENSMUSG00000042622.15	ENSMUST00000096350.11	1958	3	-29	0	-29	0	multi-exon	FALSE	canonical	3	18	junction_1	7	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTGTATGTCTTGGAC	2236	False	NA	NA	False	NA	NA	NA	79231690	79243276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79231955_79241166_79241234_79241620
tx.7009	chr15	-	3374	10	FSM	ENSMUSG00000009035.16	ENSMUST00000228002.2	3315	10	-39	-20	-19	0	multi-exon	FALSE	canonical	3	23	junction_1	128.214615603374	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	NA	False	NA	NA	NA	79287495	79244883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
tx.701	chr1	-	2086	5	FSM	ENSMUSG00000003721.15	ENSMUST00000186915.2	674	5	-70	-1342	4	0	multi-exon	FALSE	canonical	3	11	junction_4	81.0524521529115	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	121255518	121232081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121255419
tx.7010	chr15	-	3354	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	273	0	-20	0	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	618	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	NA	False	NA	NA	NA	79287496	79244883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
tx.7011	chr15	-	2653	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	159.216487839671	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCCTCTGTCTGCCTC	8036	False	NA	NA	False	NA	NA	NA	79326320	79302056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326292
tx.7012	chr15	-	2714	10	ISM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	3053	0	71	0	3prime_fragment	TRUE	canonical	3	402	junction_1	63.5343787563128	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	5084	False	NA	NA	False	NA	NA	NA	79323147	79302055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971
tx.7013	chr15	-	2782	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-80	-1310	54	0	multi-exon	FALSE	canonical	3	332	junction_10	81.5738315883225	439	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8073	False	NA	NA	False	NA	NA	NA	79326283	79302055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
tx.7014	chr15	-	3411	7	ISM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-79	3315	55	0	5prime_fragment	FALSE	canonical	3	332	junction_6	88.6561710580074	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGCGTTTCTTAAG	8074	False	NA	NA	False	NA	NA	NA	79326282	79306680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
tx.7015	chr15	-	2731	9	NIC	ENSMUSG00000022433.22	novel	3174	9	NA	NA	51	-4	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	217.31684098339	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGCTGGTGTGCGTTTCT	8070	False	NA	NA	False	NA	NA	NA	79326286	79306684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
tx.7016	chr15	+	1411	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	False	NA	NA	False	NA	NA	NA	79400611	79411940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
tx.7017	chr15	-	3535	2	ISM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	14314	3	14128	-3	3prime_fragment	FALSE	canonical	3	53	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGTGAATTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	79416628	79411939	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_79414719_79415872
tx.7018	chr15	-	4549	13	FSM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	183	0	1	0	multi-exon	FALSE	canonical	3	53	junction_1	13.6714930502203	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	NA	False	NA	NA	NA	79430759	79411936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79414719_79415872_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
tx.7019	chr15	-	4544	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	182	0	0	0	multi-exon	FALSE	canonical	3	55	junction_12	13.0064086767511	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	NA	False	NA	NA	NA	79430760	79411936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
tx.702	chr1	-	2393	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	72.0316597059932	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTAGTCCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	121255482	121232082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247357_121247702_121255419
tx.7020	chr15	-	4618	6	ISM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	16163	112	-3049	2	intron_retention	FALSE	canonical	3	59	junction_5	11.0742945599257	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAAGACTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	79473146	79445809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869
tx.7021	chr15	-	2215	14	FSM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	4	0	4	0	multi-exon	FALSE	canonical	3	26	junction_6	20.9451241307391	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGATTCTGCATTCA	NA	False	NA	NA	False	NA	NA	NA	79489305	79445697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79472951_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
tx.7022	chr15	-	2045	12	FSM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	0	-114	0	0	multi-exon	FALSE	canonical	3	19	junction_5	21.834085113127	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGATTCTGCATTCA	NA	False	NA	NA	False	NA	NA	NA	79489300	79445697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
tx.7023	chr15	+	1132	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	15	0	15	0	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGTGTAGCAAAAATAG	9574	False	NA	NA	False	NA	NA	NA	79543414	79551861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
tx.7024	chr15	+	1027	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	9	533	9	187	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	296	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTATTGCTGTGTTTGTG	8187	False	NA	NA	False	NA	NA	NA	79555070	79557068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
tx.7025	chr15	-	3393	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	47	0	47	0	multi-exon	FALSE	canonical	3	116	junction_1	10.9848380355227	335	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTCTACTTGTCTGAT	NA	False	NA	NA	False	NA	NA	NA	79572073	79558451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
tx.7026	chr15	+	3244	12	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	31	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_3	65.8303605005803	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATGTTCCCTGCCC	NA	False	NA	NA	False	NA	NA	NA	79575076	79605680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_79575300_79578356_79578469_79591192_79591374_79592069_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
tx.7027	chr15	+	3416	12	FSM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	32	1	32	-1	multi-exon	FALSE	canonical	3	199	junction_6	19.3826198026279	492	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCATGTTCCCTGCC	NA	False	NA	NA	False	NA	NA	NA	79575077	79605679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
tx.7028	chr15	-	1528	5	ISM	ENSMUSG00000022420.17	ENSMUST00000162713.9	1357	7	2516	-684	11	0	3prime_fragment	FALSE	canonical	3	63	junction_3	39.8591269347436	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	254	False	NA	NA	False	NA	NA	NA	79658657	79645653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_79646727_79647710_79647795_79649016_79649223_79649987_79650055_79658559
tx.7029	chr15	-	1463	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	9	0	9	0	multi-exon	FALSE	canonical	3	65	junction_3	38.6091526281874	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	252	False	NA	NA	False	NA	NA	NA	79658659	79645653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
tx.703	chr1	-	2365	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	70.4346505634833	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTTAGTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	121255491	121232084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247635_121255419
tx.7030	chr15	-	4963	5	FSM	ENSMUSG00000022421.21	ENSMUST00000175858.10	4948	5	-16	1	-16	-1	multi-exon	FALSE	canonical	3	12	junction_4	7.59522876548166	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGCTCTTCTGTCATA	NA	False	NA	NA	False	NA	NA	NA	79688926	79670553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79688175
tx.7031	chr15	-	4524	8	FSM	ENSMUSG00000089837.10	ENSMUST00000023060.13	1162	8	-38	-3324	-38	3324	multi-exon	FALSE	canonical	2	3	junction_4	65.4759653675784	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTCTTCTGTCATATG	NA	False	NA	NA	False	NA	NA	NA	79718476	79670551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79717712_79717780_79717902_79717969_79718115_79718160_79718343
tx.7032	chr15	-	5323	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109625.8	3056	5	-26	-2241	11	-4	multi-exon	FALSE	canonical	2	10	junction_1	62.5114989421946	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCCCAGCCCCCTGGAT	NA	False	NA	NA	False	NA	NA	NA	79718464	79708100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79713126_79717712_79717780_79717902_79717969_79718115_79718160_79718343
tx.7033	chr15	-	3227	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	397	2182	-11	22	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	79718492	79710278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
tx.7034	chr15	+	1953	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	219.175122618878	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTAAGTTGTGCATG	7495	False	NA	NA	False	NA	NA	NA	79775852	79792115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
tx.7035	chr15	+	1842	8	FSM	ENSMUSG00000009585.19	ENSMUST00000175752.8	1977	8	-34	169	3	-1	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAAGTTGTGCATGATT	8257	False	NA	NA	False	NA	NA	NA	79776614	79792118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
tx.7036	chr15	+	1942	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	11	0	3	0	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	566	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTTGTGCATGATTG	8257	False	NA	NA	False	NA	NA	NA	79776614	79792119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
tx.7037	chr15	-	4461	2	ISM	ENSMUSG00000053411.17	ENSMUST00000089293.11	3388	6	12102	-9	11979	6	3prime_fragment	FALSE	canonical	3	419	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79804738	79800001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_79802678_79802953
tx.7038	chr15	-	3061	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	153.192326468687	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79816972	79800001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
tx.7039	chr15	-	3210	6	FSM	ENSMUSG00000053411.17	ENSMUST00000109615.8	710	6	-191	-2309	37	6	multi-exon	FALSE	canonical	3	216	junction_5	106.136892737634	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79816932	79800001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
tx.704	chr1	-	2451	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	245	1	14	-1	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTAGTCCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	121255508	121232082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
tx.7040	chr15	-	2996	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	-97	0	19	0	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	NA	False	NA	NA	NA	79816950	79800007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
tx.7041	chr15	-	5793	5	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	216	junction_4	109.82372239184	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	NA	False	NA	NA	NA	79816975	79800007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79816648
tx.7042	chr15	-	3185	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	-9	-2648	-8	6	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79855328	79800001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
tx.7043	chr15	+	5102	2	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTGCCTCTTTCGACC	9603	False	NA	NA	False	NA	NA	NA	79856630	79878347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_+_79856837_79873451
tx.7044	chr15	+	4291	3	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCTCTTTCGACCAG	9607	False	NA	NA	False	NA	NA	NA	79856634	79878349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_+_79856837_79873451_79873597_79874405
tx.7045	chr15	-	2197	7	NNC	ENSMUSG00000000489.8	novel	2944	7	NA	NA	214	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_6	4.63381292481928	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGAATCTGTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	79897190	79880074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79897064
tx.7046	chr15	-	2625	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	319	0	319	0	multi-exon	FALSE	canonical	2	5	junction_6	4.63381292481928	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGAATCTGTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	79898690	79880074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
tx.7047	chr15	-	1292	10	FSM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	54	5	1	-1	multi-exon	FALSE	canonical	3	16287	junction_9	4874.04926341766	1754	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	NA	False	NA	NA	NA	79967553	79961996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
tx.7048	chr15	-	1472	10	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	214	junction_7	9920.80080773053	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	NA	False	NA	NA	NA	79967553	79961996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
tx.7049	chr15	+	4180	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	-1	1	-1	-1	multi-exon	FALSE	canonical	3	37	junction_3	626.014554321401	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTGTGTCACTGTGT	NA	False	NA	NA	False	NA	NA	NA	79975543	80003701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055
tx.705	chr1	+	7248	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	26	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTCATTTAAGAATA	NA	False	NA	NA	False	NA	NA	NA	121358803	121434189	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
tx.7050	chr15	+	808	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	10	1	0	-1	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	366	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCCTGTGTGGATT	NA	False	NA	NA	False	NA	NA	NA	79975544	79997641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
tx.7051	chr15	+	3701	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	18	-562	8	562	intron_retention	FALSE	canonical	3	1445	junction_1	0	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTCATTCATTCATTC	NA	False	NA	NA	False	NA	NA	NA	79975552	79998204	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_79975694_79994644
tx.7052	chr15	+	1715	3	NIC	ENSMUSG00000022415.13	novel	819	4	NA	NA	10	-1	intron_retention	FALSE	canonical	3	1362	junction_2	41.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCCTGTGTGGATT	NA	False	NA	NA	False	NA	NA	NA	79975554	79997641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_79975694_79994644_79995946_79997366
tx.7053	chr15	+	2956	11	FSM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	6	2	6	-2	multi-exon	FALSE	canonical	3	51	junction_3	7.29109045342327	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCATCTTGTCTATC	4999	False	NA	NA	False	NA	NA	NA	80017333	80045906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
tx.7054	chr15	+	4853	2	FSM	ENSMUSG00000042428.7	ENSMUST00000044970.7	4665	2	-188	0	-188	0	multi-exon	FALSE	canonical	3	32	junction_1	0	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGTGTGTGCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80057733	80099720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80058040_80095173
tx.7055	chr15	+	5649	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-25	0	intron_retention	FALSE	canonical	3	18	junction_1	87.9071479839192	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2728	False	NA	NA	False	NA	NA	NA	80118193	80137572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
tx.7056	chr15	+	5217	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	12	0	intron_retention	FALSE	canonical	3	9	junction_1	90.5423473666696	2	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2765	False	NA	NA	False	NA	NA	NA	80118230	80137572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_80118365_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
tx.7057	chr15	+	5011	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	-32	-585	-11	0	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2804	False	NA	NA	False	NA	NA	NA	80118269	80137572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
tx.7058	chr15	+	5085	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	63	0	1	0	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	71	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2816	False	NA	NA	False	NA	NA	NA	80118281	80137572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
tx.7059	chr15	+	5083	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	65	0	3	0	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2818	False	NA	NA	False	NA	NA	NA	80118283	80137572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
tx.706	chr1	-	3601	12	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	275	4	8	-4	3prime_fragment	FALSE	canonical	3	571	junction_7	87.1971263458562	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTTTATACCTTT	NA	False	NA	NA	False	NA	NA	NA	121495443	121481567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609
tx.7060	chr15	+	5098	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	52	junction_1	85.8344660119439	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2816	False	NA	NA	False	NA	NA	NA	80118281	80137572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
tx.7061	chr15	+	4996	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	-17	-585	4	0	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	15	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2819	False	NA	NA	False	NA	NA	NA	80118284	80137572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
tx.7062	chr15	+	5200	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	-15	-22	-15	0	intron_retention	FALSE	canonical	3	52	junction_1	78.4488509936393	23	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2800	False	NA	NA	False	NA	NA	NA	80118265	80137572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
tx.7063	chr15	+	5177	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	8	-22	-5	0	intron_retention	FALSE	canonical	3	52	junction_1	78.4488509936393	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2823	False	NA	NA	False	NA	NA	NA	80118288	80137572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
tx.7064	chr15	+	3875	1	ISM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	15478	1	1865	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	1	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	177	False	NA	NA	False	NA	NA	NA	80133696	80137571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_80133700_80137600
tx.7065	chr15	+	1411	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	314	0	-25	0	multi-exon	FALSE	canonical	3	1292	junction_2	43	726	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4459	False	NA	NA	False	NA	NA	NA	80139698	80141742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80139887_80140407_80140723_80140834
tx.7066	chr15	+	1397	2	ISM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	849	0	510	0	3prime_fragment	FALSE	canonical	3	1292	junction_1	0	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4994	False	NA	NA	False	NA	NA	NA	80140233	80141742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_80140723_80140834
tx.7067	chr15	-	822	4	FSM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	12	4	12	-4	multi-exon	FALSE	canonical	3	697	junction_3	66.5181679443043	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATTCAAGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80148504	80144819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_80145332_80145497_80145596_80148183_80148319_80148427
tx.7068	chr15	+	1884	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	15	1812	1	15	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	1070	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832705	80853335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
tx.7069	chr15	+	2751	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	28	218	14	183	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTCCCATCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	80861993	80896273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
tx.707	chr1	-	2209	13	FSM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	44	5	44	-5	multi-exon	FALSE	canonical	3	390	junction_12	122.318232492135	920	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTTTTTTATACCTT	NA	False	NA	NA	False	NA	NA	NA	121495674	121481568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
tx.7070	chr15	-	4355	14	FSM	ENSMUSG00000042292.19	ENSMUST00000239114.2	4366	14	9	2	9	-2	multi-exon	FALSE	canonical	3	46	junction_4	7.74138192332869	125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGTTGTATTTGATCC	NA	False	NA	NA	False	NA	NA	NA	81074949	80896483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81074707
tx.7071	chr15	-	1700	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	23	1	10	-1	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	246	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGAAAGTTGCTCTTGAT	6871	False	NA	NA	False	NA	NA	NA	81244990	81203112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
tx.7072	chr15	-	2062	2	ISM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	33557	-12	19440	12	3prime_fragment	FALSE	canonical	3	2669	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTTGTTAGCCTGTTA	1174	False	NA	NA	False	NA	NA	NA	81250687	81247857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_81249780_81250547
tx.7073	chr15	-	3028	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	318	0	-131	0	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	2794	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	NA	False	NA	NA	NA	81283926	81247869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
tx.7074	chr15	+	6048	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	0	10	0	-10	multi-exon	FALSE	canonical	3	30	junction_9	9.02397355744309	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGGTCTGGCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	81284338	81341673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
tx.7075	chr15	+	6195	11	NIC	ENSMUSG00000022401.13	novel	1641	11	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	16.5060594934103	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGGTCTGGCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	81284339	81341673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_81284489_81298632_81298750_81300047_81300196_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
tx.7076	chr15	+	517	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	50	1108	2	-125	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	559	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	NA	False	NA	NA	NA	81350546	81359462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
tx.7077	chr15	+	9596	31	FSM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	-35	5	11	-5	multi-exon	FALSE	canonical	3	47	junction_8	16.0257085126784	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCTTGGTGTCACTTC	2874	False	NA	NA	False	NA	NA	NA	81469562	81536273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
tx.7078	chr15	+	3438	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	46	3	1	-3	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	1492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	NA	False	NA	NA	NA	81548135	81572513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
tx.7079	chr15	-	3227	3	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	2131	4705	379	3254	internal_fragment	FALSE	canonical	3	19	junction_2	1.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCCTCTTTCAGTGTG	7126	False	NA	NA	False	NA	NA	NA	81579357	81575070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_81576508_81577187_81577355_81577734
tx.708	chr1	-	2715	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	-153	3	7	-3	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	2099	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	125363437	125320645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
tx.7080	chr15	-	2912	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	121	0	-2	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	1663	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	81614083	81588453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
tx.7081	chr15	+	2337	18	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	17	2184	at_least_one_novel_splicesite	TRUE	canonical	3	50	junction_17	51.2595674249711	130	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATAGGGCATGATGGCA	1965	False	NA	NA	False	NA	NA	NA	81629274	81670841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81670820
tx.7082	chr15	+	5723	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	17	0	17	0	multi-exon	FALSE	canonical	3	112	junction_21	52.4698457282257	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTAGCCTTTGTTCT	1965	False	NA	NA	False	NA	NA	NA	81629274	81680461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
tx.7083	chr15	+	4196	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	46	-163	46	-2	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	141	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCAGTGGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	81695660	81711062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
tx.7084	chr15	-	3983	2	FSM	ENSMUSG00000048546.9	ENSMUST00000050467.9	4151	2	168	0	6	0	multi-exon	FALSE	canonical	3	45	junction_1	0	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTGCCTACTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	81742518	81732472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81736074_81742136
tx.7085	chr15	-	865	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	1	797	1	152	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	498	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAACGTCTACTTTTAG	NA	False	NA	NA	False	NA	NA	NA	81756111	81749517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
tx.7086	chr15	+	2743	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	175	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	3463	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	NA	False	NA	NA	NA	81756684	81799334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
tx.7087	chr15	-	1462	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	28	1052	28	320	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCCCCTTTTCATTAGC	456	False	NA	NA	False	NA	NA	NA	81810413	81800281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
tx.7088	chr15	-	1230	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	70	0	-2	0	multi-exon	FALSE	canonical	3	940	junction_3	83.919543587405	502	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	81845061	81835308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
tx.7089	chr15	-	647	5	FSM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	-29	-6	-4	6	multi-exon	FALSE	canonical	3	1051	junction_1	37.9300342736465	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCATTTCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	81845063	81839737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
tx.709	chr1	-	2526	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	24	4	4	-3	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	1377	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	125363440	125320645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
tx.7090	chr15	-	2978	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	-44	0	18	0	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	NA	False	NA	NA	NA	81900408	81876723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
tx.7091	chr15	+	2087	13	FSM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	27	0	27	0	multi-exon	TRUE	canonical	3	579	junction_9	64.3868516598433	748	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	81900596	81924286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
tx.7092	chr15	-	1251	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	11	815	-8	138	multi-exon	FALSE	canonical	3	3045	junction_2	110	984	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGGCAGCTGTGCCTG	4917	False	NA	NA	False	NA	NA	NA	81931788	81925540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_81926570_81928097_81928219_81931687
tx.7093	chr15	+	2041	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	2	3	2	0	multi-exon	FALSE	canonical	3	36	junction_2	6.64371047599825	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTATGTCTTTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	82012124	82026401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
tx.7094	chr15	+	2304	2	ISM	ENSMUSG00000022463.9	ENSMUST00000231065.2	2664	3	8	1821	3	537	5prime_fragment	FALSE	canonical	3	751	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGTTTTAGGGGGCTGGG	2246	False	NA	NA	False	NA	NA	NA	82031454	82056005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_82031692_82053938
tx.7095	chr15	+	1997	4	FSM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	-2	-14	-2	14	multi-exon	FALSE	canonical	3	662	junction_2	39.6176167324027	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAAGTGTGACTGTGC	2241	False	NA	NA	False	NA	NA	NA	82031449	82058109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953
tx.7096	chr15	+	5004	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	71	2	1	-2	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	592	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2244	False	NA	NA	False	NA	NA	NA	82031452	82089578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
tx.7097	chr15	+	3109	10	ISM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	34816	2	-12975	-2	3prime_fragment	FALSE	canonical	3	437	junction_9	96.3108393576641	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2292	False	NA	NA	False	NA	NA	NA	82066197	82089578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
tx.7098	chr15	-	1841	4	FSM	ENSMUSG00000096883.3	ENSMUST00000179269.3	2588	4	-39	786	-39	240	multi-exon	FALSE	canonical	3	79	junction_3	2.62466929133727	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGATCGATCATCAGTC	NA	False	NA	NA	False	NA	NA	NA	82097055	82091154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_82091749_82091951_82092099_82092663_82092798_82096089
tx.7099	chr15	-	1943	3	FSM	ENSMUSG00000068105.12	ENSMUST00000089161.10	1924	3	-14	-5	2	5	multi-exon	FALSE	canonical	3	7	junction_1	3	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGGTGCTGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	82108568	82105938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_82107478_82107919_82108124_82108368
tx.71	chr1	-	3115	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-60	-91	6	-2	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCACTGCTCATTTATA	NA	False	NA	NA	False	NA	NA	NA	16589524	16414423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
tx.710	chr1	+	2658	16	NIC	ENSMUSG00000026342.11	novel	756	6	NA	NA	-6	-35	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	24.987107786928	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	125488325	125523522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_125488555_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
tx.7100	chr15	-	895	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	10	297	10	3	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGTAGATGCAGAAAC	NA	False	NA	NA	False	NA	NA	NA	82128939	82118276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
tx.7101	chr15	+	5021	10	FSM	ENSMUSG00000022456.19	ENSMUST00000023095.14	4992	10	-29	0	-29	0	multi-exon	FALSE	canonical	3	32	junction_7	5.9087714668037	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	82159410	82178775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
tx.7102	chr15	+	2590	11	NIC	ENSMUSG00000022456.19	novel	1888	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	9.47048045243746	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	82159427	82178775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
tx.7103	chr15	+	3906	6	FSM	ENSMUSG00000022455.5	ENSMUST00000023089.5	1413	6	5	-2498	5	2498	multi-exon	FALSE	canonical	3	14	junction_3	3.32264954516723	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCATGGTCAGTAATTTC	2005	False	NA	NA	False	NA	NA	NA	82183159	82201322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_82183270_82189871_82189981_82190244_82190387_82190546_82190640_82192723_82192829_82197975
tx.7104	chr15	-	1749	8	ISM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	1303	13	813	-13	3prime_fragment	FALSE	canonical	3	252	junction_2	16.050939320215	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTCTAATCAACCAGG	2647	False	NA	NA	False	NA	NA	NA	82221724	82213745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587
tx.7105	chr15	-	1916	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	-16	13	-16	-13	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTCTAATCAACCAGG	1328	False	NA	NA	False	NA	NA	NA	82223043	82213745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
tx.7106	chr15	-	1770	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	10	-15	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	86.2554346113913	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1300	False	NA	NA	False	NA	NA	NA	82223071	82213747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222438_82222516_82222952
tx.7107	chr15	+	584	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	29	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	801.5	96	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGTCCCCATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	82230243	82233266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_82230471_82232100_82232242_82233050
tx.7108	chr15	+	583	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	97	25	-26	6	multi-exon	FALSE	canonical	3	1353	junction_2	125	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGTCCCCATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	82230251	82233266	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_82230471_82232100_82232242_82233043
tx.7109	chr15	+	535	3	NNC	ENSMUSG00000022452.17	novel	597	3	NA	NA	28	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCGTCCCCATTTCTC	NA	False	NA	NA	False	NA	NA	NA	82230242	82233265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_82230422_82232100_82232242_82233050
tx.711	chr1	+	2733	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	-5	5	-5	-5	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTCTGCTTAAGCGAT	NA	False	NA	NA	False	NA	NA	NA	125488747	125523552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
tx.7110	chr15	-	512	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	70	8	2	-8	multi-exon	FALSE	canonical	3	3916	junction_1	175	591	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTTCCTGTGGTCTC	6282	False	NA	NA	False	NA	NA	NA	82238453	82234348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_82234573_82235179_82235296_82238281
tx.7111	chr15	-	4988	5	NNC	ENSMUSG00000041852.16	novel	7323	6	NA	NA	44886	-11	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	52.0114170158822	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	NA	False	NA	NA	False	NA	NA	NA	82739126	82692647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_82693989_82698681_82698772_82699811_82699862_82709431_82709526_82735713
tx.7112	chr15	-	5676	4	ISM	ENSMUSG00000041852.16	ENSMUST00000048966.7	7417	5	56431	11	44108	-11	3prime_fragment	FALSE	canonical	3	113	junction_3	13.9522996909709	119	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	NA	False	NA	NA	False	NA	NA	NA	82739904	82692647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713
tx.7113	chr15	-	7555	5	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	4	-19	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	45.3727616527802	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTGTGTCCTTTTTCA	9172	False	NA	NA	False	NA	NA	NA	82784008	82692655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82783702
tx.7114	chr15	+	1367	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	4	0	4	0	multi-exon	FALSE	canonical	3	56	junction_2	9.92534113742268	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAAGTGGCTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	82984408	83000875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
tx.7115	chr15	-	1900	7	FSM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	50	2413	0	2	multi-exon	FALSE	canonical	3	832	junction_3	73.7437379639037	951	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCTCCTGAGCTCT	NA	False	NA	NA	False	NA	NA	NA	83006952	83000046	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
tx.7116	chr15	-	3253	9	FSM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	46	0	-2	0	multi-exon	FALSE	canonical	3	462	junction_6	74.2839779158332	465	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	NA	False	NA	NA	NA	83033539	83010176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
tx.7117	chr15	-	2045	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	376	1	376	-1	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	1253	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCAGCGTTTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	83056417	83037695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
tx.7118	chr15	-	2131	3	FSM	ENSMUSG00000047878.14	ENSMUST00000164614.3	1974	3	1	-158	-1	0	multi-exon	FALSE	canonical	3	30	junction_2	34	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2267	False	NA	NA	False	NA	NA	NA	83135931	83110922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83112796_83114714_83114859_83135817
tx.7119	chr15	-	2097	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	57	junction_2	20.5	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2218	False	NA	NA	False	NA	NA	NA	83135980	83110922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83112796_83114714_83114859_83135900
tx.712	chr1	+	5341	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	32	367	intron_retention	FALSE	canonical	3	45	junction_6	206.314634466539	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCATCCTATAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	127701932	127734036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898
tx.7120	chr15	-	4049	2	NIC	ENSMUSG00000047878.14	novel	2092	3	NA	NA	-38	0	intron_retention	FALSE	canonical	3	57	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2185	False	NA	NA	False	NA	NA	NA	83136013	83110922	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_83114859_83135900
tx.7121	chr15	-	2602	16	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	10.2515039547051	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGGTTGCCTGTGTTGTC	3544	False	NA	NA	False	NA	NA	NA	83234429	83183940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
tx.7122	chr15	-	2615	16	FSM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	3	1	3	0	multi-exon	FALSE	canonical	3	20	junction_9	11.3927852413515	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGGTTGCCTGTGTTGTC	3528	False	NA	NA	False	NA	NA	NA	83234445	83183940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
tx.7123	chr15	-	6084	3	NIC	ENSMUSG00000075511.10	novel	4969	3	NA	NA	-4	198	intron_retention	FALSE	canonical	3	28	junction_1	13	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTTGTGAAGTAAGC	241	False	NA	NA	False	NA	NA	NA	83251487	83237849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_83243152_83249229_83249715_83251190
tx.7124	chr15	-	6074	3	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-2	198	intron_retention	FALSE	canonical	3	13	junction_2	7.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTTGTGAAGTAAGC	248	False	NA	NA	False	NA	NA	NA	83251480	83237849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_83243152_83249229_83249712_83251190
tx.7125	chr15	-	6203	4	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-14	198	intron_retention	FALSE	canonical	3	20	junction_1	14.2672897060218	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTTGTGAAGTAAGC	231	False	NA	NA	False	NA	NA	NA	83251497	83237849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_83243152_83248020_83248130_83249229_83249715_83251190
tx.7126	chr15	-	5590	2	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	2	195	intron_retention	FALSE	canonical	3	7	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAACTGTTGTGAAGTA	247	False	NA	NA	False	NA	NA	NA	83251481	83237852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_83243152_83251190
tx.7127	chr15	-	6177	4	FSM	ENSMUSG00000075511.10	ENSMUST00000100370.2	2270	4	-9	-3898	-4	185	multi-exon	FALSE	canonical	3	13	junction_3	6.97614984548545	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTTTATCAAAGAAACTG	241	False	NA	NA	False	NA	NA	NA	83251487	83237862	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83243152_83248020_83248130_83249229_83249712_83251190
tx.7128	chr15	-	3274	12	NIC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	37	junction_10	226.521303250812	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTTTGCCTTGCATCC	7106	False	NA	NA	False	NA	NA	NA	83348808	83260326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83337067_83337167_83348659
tx.7129	chr15	-	3213	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	-39	12	-30	-8	multi-exon	FALSE	canonical	3	62	junction_10	172.10531659423	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTCCCTTTGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	83317055	83260330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
tx.713	chr1	+	4846	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	33	-368	33	368	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATCCTATAAAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	127701933	127734037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
tx.7130	chr15	-	3172	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	-2	523	-2	-8	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	881	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTCCCTTTGCCTTGC	7105	False	NA	NA	False	NA	NA	NA	83348809	83260330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
tx.7131	chr15	-	3036	10	NIC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	-3	-12	intron_retention	FALSE	canonical	2	10	junction_9	194.819638019438	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACAGTCCCTTTGCC	7104	False	NA	NA	False	NA	NA	NA	83348810	83260334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83348659
tx.7132	chr15	-	2055	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	4	1	4	-1	multi-exon	FALSE	canonical	3	63	junction_11	7.21110255092798	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGACTTTATCTTATTAT	NA	False	NA	NA	False	NA	NA	NA	83395090	83367970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
tx.7133	chr15	-	2198	13	NNC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	26.455413224686	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTTTATCTTATTA	NA	False	NA	NA	False	NA	NA	NA	83395090	83367971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83393853_83393998_83394934
tx.7134	chr15	-	1912	4	FSM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	4	1	4	-1	multi-exon	FALSE	canonical	3	138	junction_2	37.1423687391577	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGCTCTCTCTCTCTGT	8055	False	NA	NA	False	NA	NA	NA	83439932	83430998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83432144_83433318_83433537_83436734_83436823_83439471
tx.7135	chr15	+	851	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	-21	7	-21	-7	multi-exon	FALSE	canonical	3	179	junction_1	54.5119762580257	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACAGACTCTGTACT	NA	False	NA	NA	False	NA	NA	NA	83447771	83458397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
tx.7136	chr15	+	886	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	6062	-7	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	92.1013934024164	36	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACAGACTCTGTACT	NA	False	NA	NA	False	NA	NA	NA	83454137	83458397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_83454247_83455585_83455797_83456400_83456540_83457970
tx.7137	chr15	-	3228	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	-6	552	-6	-523	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	273	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTTTCTCTTTGGG	4665	False	NA	NA	False	NA	NA	NA	83479364	83459842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
tx.7138	chr15	-	2275	7	FSM	ENSMUSG00000018865.10	ENSMUST00000082365.6	2383	7	108	0	-37	0	multi-exon	FALSE	canonical	1	1	junction_1	29.8105126870818	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	83989847	83960297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83961784_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
tx.7139	chr15	-	2400	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-33	-1048	-33	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	83989843	83960297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
tx.714	chr1	+	4953	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	32	1753	32	376	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	342	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAGAGTGACTCATTC	NA	False	NA	NA	False	NA	NA	NA	127701932	127734045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
tx.7140	chr15	+	2975	9	NNC	ENSMUSG00000041653.6	novel	1313	8	NA	NA	-27	2283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	14.5425023637612	20	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCTGTCTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	84052010	84073720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84071960
tx.7141	chr15	+	1674	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	-8	2963	-8	-2963	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	770	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	NA	False	NA	NA	NA	84076433	84098505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
tx.7142	chr15	+	3769	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	14	1	-9	-1	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGTGCTTTGATCAGAC	NA	False	NA	NA	False	NA	NA	NA	84116257	84199888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
tx.7143	chr15	+	2878	13	FSM	ENSMUSG00000022439.10	ENSMUST00000023074.9	2619	13	-262	3	-262	-3	multi-exon	TRUE	canonical	2	3	junction_2	5.54464205837992	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCATGACTTAATGACA	NA	False	NA	NA	False	NA	NA	NA	84208658	84227140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_84209033_84211188_84211285_84212495_84212561_84213064_84213168_84214223_84214365_84215179_84215296_84216491_84216548_84216891_84216915_84218542_84218602_84218786_84218856_84221985_84222088_84225054_84225128_84225539
tx.7144	chr15	+	1563	8	NNC	ENSMUSG00000036106.16	novel	1719	9	NA	NA	-6411	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	49.7864828799045	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCCTGTCTGCCCCCTG	8459	False	NA	NA	False	NA	NA	NA	84547409	84587871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_84547463_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
tx.7145	chr15	+	1685	9	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	-6411	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	42.0979141407267	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTCTGCCCCCTGGT	8459	False	NA	NA	False	NA	NA	NA	84547409	84587873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_84547463_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
tx.7146	chr15	+	1846	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	-15	-1	-15	0	multi-exon	FALSE	canonical	3	134	junction_7	10.3844467687921	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	NA	False	NA	NA	False	NA	NA	NA	84565187	84587874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
tx.7147	chr15	+	4786	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-21	1	-21	-1	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	327	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTTGGGTACTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	84807590	84827163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
tx.7148	chr15	+	4910	8	NNC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	156.443900096971	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGGGTACTGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	84807590	84827164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_84807852_84811568_84811771_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
tx.7149	chr15	+	4046	4	ISM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	11583	3	11545	-3	3prime_fragment	FALSE	canonical	3	488	junction_1	6.0184900284226	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGTTGGGTACTGTTCT	NA	False	NA	NA	False	NA	NA	NA	84819194	84827161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_84819725_84821687_84821770_84822558_84822678_84823846
tx.715	chr1	+	6787	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	33	-5	intron_retention	FALSE	canonical	3	45	junction_6	179.561193530847	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAATCCAAGGCTGAAACA	NA	False	NA	NA	False	NA	NA	NA	127701933	127735793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898
tx.7150	chr15	-	5898	5	ISM	ENSMUSG00000036046.15	ENSMUST00000047144.13	6845	10	33980	78	6963	-78	3prime_fragment	FALSE	canonical	3	237	junction_4	17.8115131305569	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTGTTTCTGGTGAA	NA	False	NA	NA	False	NA	NA	NA	84838221	84828214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102
tx.7151	chr15	-	2794	10	FSM	ENSMUSG00000036046.15	ENSMUST00000165743.2	5032	10	-39	2277	-10	3	multi-exon	FALSE	canonical	3	237	junction_4	21.5893206338712	275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTCAGTTTGCCCAC	NA	False	NA	NA	False	NA	NA	NA	84872211	84832197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
tx.7152	chr15	+	2706	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	65.1689163199833	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	84921294	84947031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
tx.7153	chr15	+	2492	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	26	0	-10	0	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	84921315	84947031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
tx.7154	chr15	-	4068	25	FSM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-18	-3	-18	3	multi-exon	FALSE	canonical	3	89	junction_19	18.7071269098764	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTACTCTGGTCTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	85016183	84948886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
tx.7155	chr15	+	2735	17	FSM	ENSMUSG00000006369.15	ENSMUST00000057410.14	3659	17	80	844	24	-844	multi-exon	FALSE	canonical	3	136	junction_16	137.738202761616	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTGCAATTTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	85090229	85169892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
tx.7156	chr15	+	2248	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	23	2	23	-2	multi-exon	TRUE	canonical	3	356	junction_14	63.5701845785187	329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCTTGTACCTTGGT	NA	False	NA	NA	False	NA	NA	NA	85090228	85136084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
tx.7157	chr15	+	1908	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	29	0	29	0	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	1084	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGACCCTTGATTGGA	NA	False	NA	NA	False	NA	NA	NA	85220474	85347413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
tx.7158	chr15	-	1525	4	FSM	ENSMUSG00000064284.13	ENSMUST00000125947.8	706	4	-546	-273	8	-2	multi-exon	FALSE	canonical	3	301	junction_1	22.0151463012778	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8146	False	NA	NA	False	NA	NA	NA	85695837	85691174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102
tx.7159	chr15	-	977	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	20	0	-17	0	multi-exon	FALSE	canonical	3	77	junction_4	106.509389257473	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8106	False	NA	NA	False	NA	NA	NA	85695877	85691172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
tx.716	chr1	+	4784	10	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	38	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	159.507575577672	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	NA	False	NA	NA	NA	127701938	127733670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
tx.7160	chr15	-	851	4	FSM	ENSMUSG00000064284.13	ENSMUST00000150995.8	566	4	0	-285	0	0	multi-exon	FALSE	canonical	3	9	junction_3	150.534602888062	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8085	False	NA	NA	False	NA	NA	NA	85695898	85691172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695839
tx.7161	chr15	+	3727	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	-12	34	-12	-34	multi-exon	FALSE	canonical	2	10	junction_3	3.06729262113491	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	85716494	85742989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
tx.7162	chr15	+	2922	6	NNC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	18910	3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	5.23832034148352	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAAATAGCAGTGAG	538	False	NA	NA	False	NA	NA	NA	85735454	85743026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_85735540_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
tx.7163	chr15	+	2705	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	-21	-43	-21	0	multi-exon	FALSE	canonical	3	528	junction_1	58.9672832668062	931	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7116	False	NA	NA	False	NA	NA	NA	85743924	85760774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
tx.7164	chr15	+	1525	11	FSM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	3	-2	3	0	multi-exon	FALSE	canonical	3	28	junction_4	10.36532681588	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGTCTGGGGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	85763523	85781595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
tx.7165	chr15	-	11157	35	NIC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	181	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_34	10.511527697384	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCTGTGCTGGGTGGT	NA	False	NA	NA	False	NA	NA	NA	85918223	85783129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_85784940_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
tx.7166	chr15	+	4177	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	25	5	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	117	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTGAGGAATCCTTTG	NA	False	NA	NA	False	NA	NA	NA	85942952	86021824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
tx.7167	chr15	-	2772	3	NNC	ENSMUSG00000035891.17	novel	2162	8	NA	NA	8754	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	5.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCCTCCCCTCATCC	6297	False	NA	NA	False	NA	NA	NA	86027895	86023331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_86025814_86026882_86027092_86027814
tx.7168	chr15	-	3354	8	FSM	ENSMUSG00000035891.17	ENSMUST00000156546.2	2162	8	0	-1192	0	0	multi-exon	TRUE	canonical	3	9	junction_7	5.62429133857986	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCCCTCATCCTC	NA	False	NA	NA	False	NA	NA	NA	86036649	86023329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86036605
tx.7169	chr15	-	4288	13	FSM	ENSMUSG00000035891.17	ENSMUST00000044332.16	4518	13	228	2	228	-2	multi-exon	FALSE	canonical	3	13	junction_10	4.62105687767059	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCCTCCCCTCATCC	NA	False	NA	NA	False	NA	NA	NA	86070114	86023331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
tx.717	chr1	+	5264	9	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	38	383	intron_retention	FALSE	canonical	3	50	junction_6	145.842166399159	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCATTCTTAAGGT	NA	False	NA	NA	False	NA	NA	NA	127701938	127734052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898
tx.7170	chr15	+	3259	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	-30	0	-30	0	multi-exon	FALSE	canonical	3	67	junction_12	8.71779788708135	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTTTTATTGCATT	NA	False	NA	NA	False	NA	NA	NA	86098629	86382704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
tx.7171	chr15	+	2200	14	NNC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	22.9039672540879	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTTTTATTGCAT	NA	False	NA	NA	False	NA	NA	NA	86098636	86382703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013_86381139_86382189
tx.7172	chr15	+	1635	4	FSM	ENSMUSG00000054863.10	ENSMUST00000230414.2	2649	4	-79	1093	-79	-1093	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTAAAGTTATATATTTAA	NA	False	NA	NA	False	NA	NA	NA	87428420	87642470	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_87428805_87565680_87565831_87604702_87604831_87641497
tx.7173	chr15	+	2453	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	-939	1089	-939	-1087	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATATATTTAACAGTTT	NA	False	NA	NA	False	NA	NA	NA	87508491	87642476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
tx.7174	chr15	+	3782	4	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCTCTAAGTTAGGAC	NA	False	NA	NA	False	NA	NA	NA	87784811	87799757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_+_87785451_87791516_87791647_87793598_87793787_87796932
tx.7175	chr15	-	2345	5	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	38518	-1262	8611	0	3prime_fragment	FALSE	canonical	3	571	junction_1	40.9206549312202	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	88576456	88571236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951
tx.7176	chr15	-	4757	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	563	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	88618435	88571237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
tx.7177	chr15	-	4663	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	220.32512286009	53	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	88618431	88571237	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
tx.7178	chr15	+	2863	2	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGGCCTGGCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	88592664	88595633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_+_88594893_88594998
tx.7179	chr15	-	4132	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	-3	12050	0	1999	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	274	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGTAATAATGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	88618436	88595103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
tx.718	chr1	+	4574	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	28	4	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	182.04296196228	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTGTGAACTATTCAAA	NA	False	NA	NA	False	NA	NA	NA	127701928	127733673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
tx.7180	chr15	+	5430	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	163	junction_1	12	336	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGACTGATGATGGCTT	NA	False	NA	NA	False	NA	NA	NA	88635857	88668719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_88636006_88638962_88639137_88663611
tx.7181	chr15	+	5251	2	NIC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGACTGATGATGGCT	NA	False	NA	NA	False	NA	NA	NA	88635861	88668718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_88636006_88663611
tx.7182	chr15	+	5470	4	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	71.0414589439778	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGACTGATGATGGC	NA	False	NA	NA	False	NA	NA	NA	88635862	88668717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_88636006_88638962_88639137_88654740_88654788_88663611
tx.7183	chr15	-	2131	10	FSM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	-2	1	-2	0	multi-exon	FALSE	canonical	0	0	junction_5	14.1691718917785	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTCTTGTTGTTGGT	9242	False	NA	NA	False	NA	NA	NA	88703523	88689447	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
tx.7184	chr15	+	1387	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	-21	0	-21	0	multi-exon	FALSE	canonical	3	902	junction_1	99.7619388566824	757	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	88703827	88710886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
tx.7185	chr15	+	2158	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	267	2	267	-2	multi-exon	TRUE	canonical	3	800	junction_3	47.4021096576935	1185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTGTTTATTGGA	NA	False	NA	NA	False	NA	NA	NA	88746655	88749927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
tx.7186	chr15	+	2217	5	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	291	-4	intron_retention	FALSE	canonical	3	800	junction_2	51.5770055354128	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAACTTCTGTTTATTG	NA	False	NA	NA	False	NA	NA	NA	88746679	88749925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
tx.7187	chr15	+	2409	2	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	1046	-4	intron_retention	FALSE	canonical	3	944	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAACTTCTGTTTATTG	NA	False	NA	NA	False	NA	NA	NA	88747434	88749925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_88748696_88748777
tx.7188	chr15	+	2476	14	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-10	43262	-10	-11735	5prime_fragment	TRUE	canonical	3	36	junction_13	10.1817797586303	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTCAAAGTATTATT	2897	False	NA	NA	False	NA	NA	NA	88867101	88896089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565
tx.7189	chr15	+	2021	11	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-6	49483	-6	10594	5prime_fragment	FALSE	canonical	3	47	junction_4	7.62954782408499	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGACACATGGTAATTT	2901	False	NA	NA	False	NA	NA	NA	88867105	88889868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454
tx.719	chr1	+	5095	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	40	227	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	202.663292186819	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTTATAAGTAGCCATA	NA	False	NA	NA	False	NA	NA	NA	127701940	127733896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
tx.7190	chr15	+	7975	12	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-6	43262	-6	-11735	intron_retention	FALSE	canonical	3	47	junction_4	7.60382678775509	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTCAAAGTATTATT	2901	False	NA	NA	False	NA	NA	NA	88867105	88896089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
tx.7191	chr15	+	2425	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	10	4	10	2	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGCTTTGTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	88960225	88971276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
tx.7192	chr15	+	2449	10	FSM	ENSMUSG00000015363.14	ENSMUST00000169870.8	2396	10	-49	-4	10	-2	multi-exon	FALSE	canonical	3	5	junction_3	29.0546526309673	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCTTTGTGAAGTGTAT	NA	False	NA	NA	False	NA	NA	NA	88960225	88971278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_88960345_88965182_88965248_88965555_88965657_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
tx.7193	chr15	+	2387	9	FSM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	-4	0	-4	0	multi-exon	TRUE	canonical	3	22	junction_2	3.38193731461717	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGTCACTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	88973282	88984543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
tx.7194	chr15	-	3288	10	ISM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	19655	741	-829	0	3prime_fragment	FALSE	canonical	3	53	junction_9	11.9267310517277	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGGGTTGTTACTTG	NA	False	NA	NA	False	NA	NA	NA	88987635	88983300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019
tx.7195	chr15	-	3608	9	ISM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	19549	740	-935	1	intron_retention	FALSE	canonical	3	55	junction_7	11.0453610171873	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGGGTTGTTACTTGA	NA	False	NA	NA	False	NA	NA	NA	88987741	88983299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747
tx.7196	chr15	-	6971	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-76	740	-51	1	multi-exon	FALSE	canonical	3	40	junction_22	13.0596920161065	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGGGTTGTTACTTGA	NA	False	NA	NA	False	NA	NA	NA	89007366	88983299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
tx.7197	chr15	-	7837	23	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	40	junction_20	12.6510705782894	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTCTGGGTTGTTACT	NA	False	NA	NA	False	NA	NA	NA	89007322	88983302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
tx.7198	chr15	-	7610	24	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-32	-6	intron_retention	TRUE	canonical	1	2	junction_19	17.0658681681508	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGACTGATGAGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	89007347	88982565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
tx.7199	chr15	-	2390	20	FSM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	23	-1	2	1	multi-exon	FALSE	canonical	3	17	junction_4	5.98567079345711	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTGTCTCCGTTACT	NA	False	NA	NA	False	NA	NA	NA	89012880	89007508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008457_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
tx.72	chr1	-	3370	13	NNC	ENSMUSG00000025920.20	novel	2214	13	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	36.4504991582953	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGACCCACTGCTCAT	NA	False	NA	NA	False	NA	NA	NA	16589499	16414428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16561464_16561619_16579565_16579633_16589396
tx.720	chr1	+	4222	24	FSM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	19	2	3	-2	multi-exon	FALSE	canonical	3	104	junction_1	17.6995509005001	281	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3048	False	NA	NA	False	NA	NA	NA	127796528	127871603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
tx.7200	chr15	-	2393	20	NNC	ENSMUSG00000062906.13	novel	2412	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	8.27538485267204	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGTCTCCGTTAC	NA	False	NA	NA	False	NA	NA	NA	89012881	89007509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008460_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
tx.7201	chr15	-	2443	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	19	-1	19	0	multi-exon	FALSE	canonical	2	7	junction_8	5.74096487412616	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTCTGGATCCCATT	NA	False	NA	NA	False	NA	NA	NA	89033812	89026688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
tx.7202	chr15	-	6466	38	FSM	ENSMUSG00000036606.18	ENSMUST00000109331.9	6497	38	31	0	31	0	multi-exon	FALSE	canonical	0	0	junction_37	73.775209877053	306	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9174	False	NA	NA	False	NA	NA	NA	89064960	89039751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
tx.7203	chr15	-	6226	35	ISM	ENSMUSG00000036606.18	ENSMUST00000060808.10	6394	36	2709	0	-2182	0	3prime_fragment	FALSE	canonical	3	228	junction_31	54.2875290757351	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	89052182	89039751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143
tx.7204	chr15	-	4204	5	ISM	ENSMUSG00000015377.11	ENSMUST00000229755.2	2677	18	9626	-2604	2026	0	intron_retention	FALSE	canonical	3	87	junction_2	10.0591997693654	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCTTTTAATATTTT	4901	False	NA	NA	False	NA	NA	NA	89071021	89066415	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_89069313_89069394_89069470_89069564_89070251_89070374_89070465_89070565
tx.7205	chr15	-	2010	20	FSM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	-24	2599	-7	0	multi-exon	FALSE	canonical	3	25	junction_9	20.4859251730037	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	NA	False	NA	NA	NA	89080675	89069014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
tx.7206	chr15	-	2100	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_7	13.724358808023	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	NA	False	NA	NA	NA	89080668	89069014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
tx.7207	chr15	+	4329	26	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	6.88697321034429	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTCTTATTGTT	6661	False	NA	NA	False	NA	NA	NA	89095753	89171213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
tx.7208	chr15	+	4247	25	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	7.25718035235908	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGTGTGTCTTATTGT	6661	False	NA	NA	False	NA	NA	NA	89095753	89171212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
tx.7209	chr15	+	2081	8	FSM	ENSMUSG00000036561.10	ENSMUST00000226779.2	2072	8	-8	-1	-2	1	multi-exon	FALSE	canonical	2	19	junction_2	4.65109159888563	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTGCTGTTATGAGT	6661	False	NA	NA	False	NA	NA	NA	89095753	89147472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555
tx.721	chr1	-	4665	9	ISM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	123703	7	-5801	-7	3prime_fragment	FALSE	canonical	3	115	junction_3	23.8851418249924	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	NA	False	NA	NA	NA	127906496	127881927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875
tx.7210	chr15	-	1179	6	ISM	ENSMUSG00000036529.18	ENSMUST00000175778.2	1586	9	667	-5	180	1	3prime_fragment	FALSE	canonical	3	283	junction_2	28.8097205817759	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	9608	False	NA	NA	False	NA	NA	NA	89177833	89172484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638
tx.7211	chr15	-	6190	41	FSM	ENSMUSG00000036529.18	ENSMUST00000144585.9	6165	41	-22	-3	-6	3	multi-exon	FALSE	canonical	3	242	junction_22	71.0688002923927	361	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	NA	False	NA	NA	NA	89199480	89172482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
tx.7212	chr15	+	1077	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	221	0	221	0	multi-exon	FALSE	canonical	3	63	junction_1	15	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCCACTCTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	89207143	89208934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_89207337_89207479_89207604_89208174
tx.7213	chr15	-	3297	13	FSM	ENSMUSG00000022614.9	ENSMUST00000231067.2	3262	13	-36	1	11	-1	multi-exon	FALSE	canonical	0	0	junction_12	69.3126471544375	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	89239851	89235342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766
tx.7214	chr15	-	2571	15	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	79.1957340120936	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	89239838	89235342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558_89239614_89239788
tx.7215	chr15	-	2745	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	25	136	-1	-1	multi-exon	FALSE	canonical	0	0	junction_12	66.7675469479281	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	89239837	89235342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
tx.7216	chr15	+	2040	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	16	1243	-11	20	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	984	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACCGGACAGACTATTT	NA	False	NA	NA	False	NA	NA	NA	89239954	89255786	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
tx.7217	chr15	+	2022	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	-11	1244	-11	19	multi-exon	TRUE	canonical	0	0	junction_1	269.960005245468	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACCGGACAGACTATT	NA	False	NA	NA	False	NA	NA	NA	89239954	89255785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
tx.7218	chr15	+	2882	19	ISM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	3556	1246	3405	17	3prime_fragment	FALSE	canonical	1	369	junction_13	159.937767604068	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	173	False	NA	NA	False	NA	NA	NA	89243521	89255783	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
tx.7219	chr15	-	1362	4	ISM	ENSMUSG00000022615.8	ENSMUST00000023285.5	2037	11	2902	-300	2902	300	3prime_fragment	FALSE	canonical	3	35	junction_3	10.6770782520313	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTCTGTACCAGCAG	NA	False	NA	NA	False	NA	NA	NA	89258340	89255833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_89256669_89257625_89257806_89257885_89258027_89258134
tx.722	chr1	-	4209	21	FSM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	1	0	1	0	multi-exon	TRUE	canonical	3	115	junction_3	27.0654761642946	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTATGGGTACGT	NA	False	NA	NA	False	NA	NA	NA	128030198	127881920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
tx.7220	chr15	-	1386	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	-235	-6	-207	6	multi-exon	FALSE	canonical	3	56	junction_2	1.5	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTCTGTACCAGCAG	NA	False	NA	NA	False	NA	NA	NA	89258256	89255833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89256669_89257625_89257806_89257885
tx.7221	chr15	-	2640	18	ISM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	489	216	421	-216	3prime_fragment	FALSE	canonical	3	54	junction_15	11.6440875592081	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTAGGTGCCTAT	5705	False	NA	NA	False	NA	NA	NA	89309577	89300823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390
tx.7222	chr15	-	2713	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-34	216	-34	-216	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTAGGTGCCTAT	5182	False	NA	NA	False	NA	NA	NA	89310100	89300823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
tx.7223	chr15	-	1847	10	FSM	ENSMUSG00000022617.16	ENSMUST00000171140.8	1416	10	-428	-3	-7	3	multi-exon	FALSE	canonical	3	259	junction_9	49.0736408087093	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATACAGACTTAAGTGAC	1212	False	NA	NA	False	NA	NA	NA	89314070	89310566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
tx.7224	chr15	-	1413	10	ISM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	520	-7	51	0	intron_retention	FALSE	canonical	3	146	junction_8	78.7223594447169	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	1700	False	NA	NA	False	NA	NA	NA	89313582	89310562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251
tx.7225	chr15	-	1695	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	19	-7	19	0	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	1199	False	NA	NA	False	NA	NA	NA	89314083	89310562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
tx.7226	chr15	-	1622	10	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	190	3	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATACAGACTTAAGTGAC	1409	False	NA	NA	False	NA	NA	NA	89313873	89310566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
tx.7227	chr15	+	3259	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	279	2020	279	-2020	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTTTTTAAGGTGG	1537	False	NA	NA	False	NA	NA	NA	89338394	89346651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
tx.7228	chr15	+	3327	11	ISM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	1108	2021	-21	-2021	3prime_fragment	FALSE	canonical	3	72	junction_10	9.60416576283438	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	2366	False	NA	NA	False	NA	NA	NA	89339223	89346650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
tx.7229	chr15	+	3039	10	ISM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	2628	2024	1499	-2024	3prime_fragment	FALSE	canonical	3	72	junction_9	9.68389269755597	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGCTGTTTTTAAG	3886	False	NA	NA	False	NA	NA	NA	89340743	89346647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
tx.723	chr1	+	4671	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_14	56.9085371207363	62	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	128031052	128165473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
tx.7230	chr15	+	4586	8	ISM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	3339	0	2210	0	3prime_fragment	FALSE	canonical	3	72	junction_7	10.8326792057879	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTTGCTTATCTCAGT	4597	False	NA	NA	False	NA	NA	NA	89341454	89348671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
tx.7231	chr15	-	2703	8	ISM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	1265	18	-47	-18	3prime_fragment	FALSE	canonical	3	62	junction_5	9.89743318610787	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTGTCTACAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	89360363	89356696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
tx.7232	chr15	-	2812	7	NIC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	-45	-18	intron_retention	FALSE	canonical	3	62	junction_4	10.6301458127346	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTGTCTACAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	89360361	89356696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
tx.7233	chr15	+	2612	2	NNC	ENSMUSG00000022623.18	novel	7365	22	NA	NA	243	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTCTCAGTTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	89441147	89444464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_89441233_89441937
tx.7234	chr15	-	1614	9	FSM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	28	-2	-5	2	multi-exon	FALSE	canonical	3	40	junction_3	5.95818764390649	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGGTCTCAGTTACCTT	17	True	NA	NA	False	NA	NA	NA	89476098	89466733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89476022
tx.7235	chr15	+	6651	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	-9	2	-9	-2	multi-exon	FALSE	canonical	3	65	junction_2	7.5	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTTGAATATATTTTAT	NA	False	NA	NA	False	NA	NA	NA	90108504	90117672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_90108812_90109859_90110058_90111526
tx.7236	chr15	+	6512	3	FSM	ENSMUSG00000075470.3	ENSMUST00000231200.2	6457	3	-55	0	-17	0	multi-exon	FALSE	canonical	2	7	junction_2	36.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAATATATTTTATTG	NA	False	NA	NA	False	NA	NA	NA	90108496	90117674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_90108812_90109859_90110058_90111675
tx.7237	chr15	-	3286	20	FSM	ENSMUSG00000052560.16	ENSMUST00000064391.12	3366	20	83	-3	22	2	multi-exon	FALSE	canonical	0	0	junction_15	2.20676371507754	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCTTATGTGTATTTC	NA	False	NA	NA	False	NA	NA	NA	90563552	90371682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_90373379_90381267_90381342_90384087_90384146_90385613_90385717_90393697_90393826_90400110_90400293_90406110_90406158_90424434_90424497_90425459_90425514_90436176_90436253_90452451_90452494_90453662_90453768_90456147_90456252_90469080_90469145_90486015_90486093_90499313_90499354_90503834_90503939_90532780_90532828_90533445_90533487_90563370
tx.7238	chr15	-	3268	15	NIC	ENSMUSG00000022629.18	novel	6439	37	NA	NA	-1783	1	combination_of_known_splicesites	TRUE	canonical	2	8	junction_4	3.26155715909454	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTCTTTTTCTAATTG	NA	False	NA	NA	False	NA	NA	NA	90852388	90817477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263
tx.7239	chr15	-	6104	33	NIC	ENSMUSG00000022629.18	novel	6439	37	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	3.77478786655621	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTCTTTTTCTAATTG	9586	False	NA	NA	False	NA	NA	NA	90934043	90817477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
tx.724	chr1	+	4568	24	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_12	31.0798106715592	240	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	128031053	128165473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
tx.7240	chr15	-	4051	26	NNC	ENSMUSG00000022629.18	novel	6142	33	NA	NA	-17	-12881	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	4.49639855884685	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATATTCTCTTCACTT	9564	False	NA	NA	False	NA	NA	NA	90934065	90839328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_90839603_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
tx.7241	chr15	+	2773	13	FSM	ENSMUSG00000078932.9	ENSMUST00000190436.7	2041	13	-12	-720	-12	720	multi-exon	FALSE	canonical	2	14	junction_9	6.39172642301489	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTCTTGATAATTAT	NA	False	NA	NA	False	NA	NA	NA	91083684	91145817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91124845_91125023_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
tx.7242	chr15	+	1000	3	ISM	ENSMUSG00000036218.17	ENSMUST00000169942.10	3102	10	-178	368998	-178	-278585	5prime_fragment	FALSE	canonical	2	5	junction_1	1	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGCGGTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92294583	92299919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_92295387_92297627_92297715_92299809
tx.7243	chr15	+	3071	7	ISM	ENSMUSG00000036218.17	ENSMUST00000035399.10	3376	8	80374	-5	-66143	5	3prime_fragment	FALSE	canonical	0	0	junction_2	1.24721912892465	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTAGGTCATTGTGT	NA	False	NA	NA	False	NA	NA	NA	92575380	92669705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_92575639_92578321_92578425_92641451_92641551_92644122_92644186_92650578_92650681_92655518_92655636_92667376
tx.7245	chr15	-	6618	8	FSM	ENSMUSG00000036197.17	ENSMUST00000057896.5	1891	8	-11	-4716	-1	3	multi-exon	FALSE	canonical	3	19	junction_7	17.2827624398133	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTAAATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	93173043	93137619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93163751_93163845_93172756
tx.7246	chr15	-	6522	7	FSM	ENSMUSG00000036197.17	ENSMUST00000230063.2	4427	7	20	-2115	2	3	multi-exon	FALSE	canonical	3	41	junction_3	8.55699843532896	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTAAATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	93173040	93137619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93172756
tx.7247	chr15	-	1882	5	FSM	ENSMUSG00000022634.10	ENSMUST00000133736.2	1870	5	-9	-3	-9	0	multi-exon	TRUE	canonical	3	44	junction_2	48.2875501552937	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCATTTTGTTTACAA	NA	False	NA	NA	False	NA	NA	NA	93234825	93182158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_93183504_93184290_93184444_93215419_93215490_93234220_93234347_93234637
tx.7248	chr15	-	1830	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-155	1	-28	-1	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCATTTTGTTTACA	NA	False	NA	NA	False	NA	NA	NA	93234844	93182159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
tx.7249	chr15	-	1010	9	NNC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	289.359637821172	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	False	NA	NA	False	NA	NA	NA	93296188	93283990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_93284168_93285113_93285278_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
tx.725	chr1	+	4617	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_14	61.9559515345827	33	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	128031058	128165473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
tx.7250	chr15	-	851	8	FSM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	22	4	-11	0	multi-exon	FALSE	canonical	3	583	junction_1	44.8289265214016	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	False	NA	NA	False	NA	NA	NA	93296193	93283990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
tx.7251	chr15	+	3540	6	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	14	398	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	63.5282614274938	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTCGTCTCCTCTCGT	NA	False	NA	NA	False	NA	NA	NA	93296244	93389789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93362985_93363127_93386854
tx.7252	chr15	+	3744	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	14	-2604	14	402	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGTCTCCTCTCGTTTTT	NA	False	NA	NA	False	NA	NA	NA	93296244	93389793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
tx.7253	chr15	+	3621	7	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	14	399	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTCGTCTCCTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	93296244	93389790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
tx.7254	chr15	+	3796	9	FSM	ENSMUSG00000036167.17	ENSMUST00000068457.15	3351	9	-36	-409	14	397	multi-exon	FALSE	canonical	3	14	junction_4	61.4527257328754	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	NA	NA	NA	93296244	93389788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
tx.7255	chr15	+	3526	6	NIC	ENSMUSG00000036167.17	novel	1198	8	NA	NA	17	399	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	71.6027932416048	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTCGTCTCCTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	93296247	93389790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_93296343_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
tx.7256	chr15	+	3839	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	4	400	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	53.2326430464831	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCGTCTCCTCTCGTTT	NA	False	NA	NA	False	NA	NA	NA	93296234	93389791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
tx.7257	chr15	+	3945	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	15	397	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	46.1078897803836	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	NA	NA	NA	93296245	93389788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
tx.7258	chr15	-	2747	8	ISM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	2571	7	2510	-7	3prime_fragment	FALSE	canonical	3	43	junction_6	2.1189138534559	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTATCGAATTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	94438857	94420575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933
tx.7259	chr15	-	2789	9	FSM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	48	3	-6	-3	multi-exon	FALSE	canonical	3	33	junction_8	4.64858849544676	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGAATTGTCTCTATGT	NA	False	NA	NA	False	NA	NA	NA	94441380	94420571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
tx.726	chr1	+	4515	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_12	40.7907195049507	75	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	128031058	128165473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
tx.7260	chr15	-	2908	8	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	1572	-9	1572	9	3prime_fragment	FALSE	canonical	3	505	junction_2	19.025224930956	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGCTTTCTGGTACA	NA	False	NA	NA	False	NA	NA	NA	94486188	94475822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108
tx.7261	chr15	-	2926	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	24	3	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	174.476242462043	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	94487736	94475828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
tx.7262	chr15	-	3006	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	22	-3	22	3	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	863	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	94487738	94475828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
tx.7263	chr15	+	488	2	ISM	ENSMUSG00000063296.6	ENSMUST00000229677.2	2662	3	-114	78786	-114	-78786	5prime_fragment	FALSE	canonical	3	120	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACTGTACCATGTGC	NA	False	NA	NA	False	NA	NA	NA	94526998	94536244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_94527184_94535941
tx.7264	chr15	+	2843	8	FSM	ENSMUSG00000063296.6	ENSMUST00000080141.6	2717	8	-126	0	-108	0	multi-exon	FALSE	canonical	3	72	junction_7	14.5195153683108	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGTGTGATGTAGGTT	NA	False	NA	NA	False	NA	NA	NA	94527004	94993979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_94527184_94535941_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94972284_94972415_94992239
tx.7265	chr15	-	3424	21	NNC	ENSMUSG00000022454.18	novel	3220	21	NA	NA	-58534	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	3.2542280190546	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCATGCGAGCCCGCGTCT	NA	False	NA	NA	False	NA	NA	NA	95484974	95117330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157_95425287_95425681_95425768_95484686
tx.7266	chr15	+	5713	21	FSM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	-51	-2513	-2	721	multi-exon	FALSE	canonical	3	29	junction_1	22.898635330517	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTAACGAGGTT	NA	False	NA	NA	False	NA	NA	NA	95688721	95873353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_95688938_95728524_95728588_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
tx.7267	chr15	+	5650	20	FSM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	-2	-721	-2	721	multi-exon	FALSE	canonical	3	69	junction_10	12.2043995518441	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTAACGAGGTT	NA	False	NA	NA	False	NA	NA	NA	95688721	95873353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
tx.7268	chr15	+	9000	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-669	176	-614	-176	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGATCATATAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	96184784	96302697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
tx.7269	chr15	+	6951	20	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	278	1385	278	6	3prime_fragment	FALSE	canonical	3	74	junction_12	17.2666877007469	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTATTTCTGAGTATG	NA	False	NA	NA	False	NA	NA	NA	96185731	96301488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
tx.727	chr1	+	4243	23	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_12	53.173581335717	16	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	128031075	128165473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
tx.7270	chr15	+	7670	19	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	620	1391	620	0	3prime_fragment	FALSE	canonical	3	74	junction_11	17.7051467721175	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTTATTTCTG	320	False	NA	NA	False	NA	NA	NA	96186073	96301482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
tx.7271	chr15	+	4483	7	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	82951	1386	-8290	5	3prime_fragment	FALSE	canonical	3	110	junction_6	9.29157324317757	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTATTTCTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	96268404	96301487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
tx.7272	chr15	-	5618	5	ISM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	40999	-1952	-1152	-5	3prime_fragment	FALSE	canonical	3	72	junction_2	73.1864058415222	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTACTGGTGACTGTA	NA	False	NA	NA	False	NA	NA	NA	96317725	96309584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952
tx.7273	chr15	-	5805	5	FSM	ENSMUSG00000033228.9	ENSMUST00000228072.2	4519	5	-1290	4	-1290	-4	multi-exon	FALSE	canonical	0	0	junction_2	104.145331148352	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTACTGGTGACTGTAT	NA	False	NA	NA	False	NA	NA	NA	96317863	96309583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952
tx.7274	chr15	-	5879	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-40	25	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	76.3346552480375	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCTGCTGCATAATTCT	NA	False	NA	NA	False	NA	NA	NA	96358764	96311511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
tx.7275	chr15	-	5782	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	-23	7	-23	-7	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTGAATAAAGTGTTAA	NA	False	NA	NA	False	NA	NA	NA	96358747	96311543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
tx.7276	chr15	-	5748	4	ISM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	62822	1	156	-1	3prime_fragment	FALSE	canonical	3	474	junction_1	17.6320415405843	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGAGTCTCGTATGAT	NA	False	NA	NA	False	NA	NA	NA	96477309	96469299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195
tx.7277	chr15	-	6926	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	3730	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	116.760076890843	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	NA	False	NA	NA	NA	96536113	96469300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96536028
tx.7278	chr15	-	7276	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	-11	1	-11	-1	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGAGTCTCGTATGAT	NA	False	NA	NA	False	NA	NA	NA	96540805	96469299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
tx.7279	chr15	-	7391	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	360	-4568	360	-1	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGAGTCTCGTATGAT	NA	False	NA	NA	False	NA	NA	NA	96539483	96469299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
tx.728	chr1	+	3981	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	126	6	126	-6	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	445	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTACCCTGCATTTTGCT	220	False	NA	NA	False	NA	NA	NA	128172024	128207109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
tx.7280	chr15	-	7095	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-131	2	18	-2	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	NA	False	NA	NA	NA	96540262	96469300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
tx.7281	chr15	-	4371	15	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	884	-5	-155	5	3prime_fragment	FALSE	canonical	3	258	junction_12	29.2041547225943	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGATTTTTTGTTTCCT	837	False	NA	NA	False	NA	NA	NA	96596727	96585267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495
tx.7282	chr15	-	4541	15	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	84.1414018792418	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-101	True	NA	NA	NA	96597608	96585272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96596062_96596145_96596495_96596699_96597288
tx.7283	chr15	-	4657	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	3	0	3	0	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	604	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-101	True	NA	NA	NA	96597608	96585272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
tx.7284	chr15	-	3936	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	0	-4	0	1	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	2889	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATGATCTTCTTTCGTG	NA	False	NA	NA	False	NA	NA	NA	96953837	96892699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
tx.7285	chr15	-	1452	2	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	16	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGAGTTTCTAGAATTT	1455	False	NA	NA	False	NA	NA	NA	97029758	97026299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr15_-_97027102_97029108
tx.7286	chr15	-	1595	3	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-16	940	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	28	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCACTGTTGCTTGCTTGC	NA	False	NA	NA	False	NA	NA	NA	97065141	97057873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_97059277_97064383_97064492_97065057
tx.7287	chr15	-	1740	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-16	941	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTTGCTTGCTTGCT	NA	False	NA	NA	False	NA	NA	NA	97065141	97057872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
tx.7288	chr15	-	1611	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-16	-940	-16	940	multi-exon	FALSE	canonical	3	219	junction_1	244.5	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCACTGTTGCTTGCTTGC	NA	False	NA	NA	False	NA	NA	NA	97065141	97057873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97059277_97064383_97064508_97065057
tx.7289	chr15	-	1723	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	-17	-1196	-16	940	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCACTGTTGCTTGCTTGC	NA	False	NA	NA	False	NA	NA	NA	97065141	97057873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
tx.729	chr1	+	3996	13	NNC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	112	-8	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_6	101.309858848979	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACTACCCTGCATTTTG	206	False	NA	NA	False	NA	NA	NA	128172010	128207107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188567_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
tx.7290	chr15	+	2256	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	15477	8	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	0	103	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGTGGTTCTGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	97274574	97283569	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_97275170_97281908
tx.7291	chr15	+	2257	2	NNC	ENSMUSG00000044250.9	novel	1790	2	NA	NA	15477	6	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	58	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAAAGTGGTTCTGCCTG	NA	False	NA	NA	False	NA	NA	NA	97274574	97283567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_97275170_97281905
tx.7292	chr15	-	2192	16	ISM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	2455	4	2455	-4	3prime_fragment	FALSE	canonical	3	254	junction_7	32.2446205677095	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAGGGTCGATATTTC	NA	False	NA	NA	False	NA	NA	NA	97601251	97572981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082
tx.7293	chr15	-	2262	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	5	4	5	-4	multi-exon	FALSE	canonical	3	236	junction_16	35.978292066189	403	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAGGGTCGATATTTC	NA	False	NA	NA	False	NA	NA	NA	97603701	97572981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
tx.7294	chr15	-	3859	28	FSM	ENSMUSG00000022469.18	ENSMUST00000126854.9	4005	28	-37	183	-37	0	multi-exon	FALSE	canonical	3	28	junction_8	8.12572672702261	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTTCTACCGCCTG	142	False	NA	NA	False	NA	NA	NA	97665764	97642833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
tx.7295	chr15	-	3477	27	FSM	ENSMUSG00000022469.18	ENSMUST00000177352.8	3395	27	-19	-63	-19	0	multi-exon	TRUE	canonical	3	28	junction_8	8.251232649531	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTTCTACCGCCTG	944	False	NA	NA	False	NA	NA	NA	97664962	97642833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642
tx.7296	chr15	+	2523	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	11	2	11	-2	multi-exon	TRUE	canonical	3	145	junction_2	1	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTTTTTTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	97682246	97690571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_97682498_97687783_97687952_97688467
tx.7297	chr15	-	4080	25	NIC	ENSMUSG00000022475.20	novel	4069	26	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_20	5.27029806241228	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCCTTGGGAGAACGCC	2261	False	NA	NA	False	NA	NA	NA	97729377	97690544	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
tx.7298	chr15	-	4003	24	FSM	ENSMUSG00000022475.20	ENSMUST00000088402.12	4223	24	215	5	-58	1	multi-exon	FALSE	canonical	2	7	junction_19	5.55841976156414	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATATGTTTTATTTGCT	2205	False	NA	NA	False	NA	NA	NA	97729433	97690566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
tx.7299	chr15	+	1454	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	4	-3	3	2	multi-exon	FALSE	canonical	3	86	junction_1	28.3318527024094	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTGTCTCTGACTGCCT	7684	False	NA	NA	False	NA	NA	NA	97862113	97868158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
tx.73	chr1	-	2019	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	0	122	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGGTATGTAAACCCATA	NA	False	NA	NA	False	NA	NA	NA	16689508	16639883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
tx.730	chr1	-	2932	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	-22	0	-22	0	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	6638	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	NA	False	NA	NA	NA	128287423	128259326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
tx.7300	chr15	+	1600	8	FSM	ENSMUSG00000052369.9	ENSMUST00000064200.9	1623	8	25	-2	-1	2	multi-exon	FALSE	canonical	3	51	junction_1	38.9117263685331	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTGTCTCTGACTGCCT	7706	False	NA	NA	False	NA	NA	NA	97862135	97868158	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_97862385_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
tx.7301	chr15	-	5129	54	FSM	ENSMUSG00000022483.18	ENSMUST00000023123.15	5104	54	-28	3	-28	-3	multi-exon	TRUE	canonical	0	0	junction_47	3.47415827516495	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGGTGACTTGTGTTT	8027	False	NA	NA	False	NA	NA	NA	97902604	97873485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97874068_97874522_97874766_97875062_97875251_97875601_97875891_97876218_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365_97885465_97885548_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97891897_97891952_97892424_97892470_97892748_97892803_97892896_97892951_97893240_97893295_97893983_97894038_97894369_97894424_97894528_97894574_97895192_97895271_97896179_97896285_97896425_97896480_97896579_97896613_97896734_97896768_97897155_97897173_97898283_97898488_97902289
tx.7302	chr15	-	6297	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180716.8	3882	19	229	-2644	30	-5	multi-exon	FALSE	canonical	3	13	junction_15	62.0252089332223	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACTCCCTGGACTCAAT	6372	False	NA	NA	False	NA	NA	NA	97991221	97936629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97991163
tx.7303	chr15	-	6719	18	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-24	-22	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGCTTTGACTGGG	6437	False	NA	NA	False	NA	NA	NA	97991156	97936646	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
tx.7304	chr15	-	6353	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	210	12	35	-12	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGGGAACTCCCTGG	6178	False	NA	NA	False	NA	NA	NA	97991415	97936636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
tx.7305	chr15	-	6098	17	ISM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	6610	16	410	-16	3prime_fragment	FALSE	canonical	3	146	junction_9	25.1542118739586	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTGACTGGGAACTCC	NA	False	NA	NA	False	NA	NA	NA	97985015	97936640	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966
tx.7306	chr15	-	6801	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	-26	-2969	-26	-20	multi-exon	FALSE	canonical	3	73	junction_18	49.2407790452959	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTTTGACTGGGAA	6435	False	NA	NA	False	NA	NA	NA	97991158	97936644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
tx.7307	chr15	-	6422	19	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	33	-23	combination_of_known_junctions	FALSE	canonical	3	74	junction_10	47.9875562573836	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTGTGCTTTGACTGG	6176	False	NA	NA	False	NA	NA	NA	97991417	97936647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
tx.7308	chr15	-	5893	15	ISM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	16568	-2981	10861	-8	3prime_fragment	FALSE	canonical	3	74	junction_10	46.9002415032292	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGAACTCCCTGGACTC	3347	False	NA	NA	False	NA	NA	NA	97974564	97936632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430
tx.7309	chr15	-	1954	2	FSM	ENSMUSG00000033075.18	ENSMUST00000180531.2	1270	2	-94	-590	-29	590	multi-exon	FALSE	canonical	3	5	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTTGGTGTCTGTTC	6313	False	NA	NA	False	NA	NA	NA	97991280	97985847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97987685_97991163
tx.731	chr1	-	2175	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	0	0	0	0	multi-exon	TRUE	canonical	3	1712	junction_8	135.919976456737	2663	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	NA	False	NA	NA	NA	128345096	128291443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
tx.7310	chr15	-	2449	2	FSM	ENSMUSG00000033075.18	ENSMUST00000182611.2	853	2	-375	-1221	-11	587	multi-exon	FALSE	canonical	3	12	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGGTCTTGGTGTCTG	6450	False	NA	NA	False	NA	NA	NA	97991143	97985850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_97987685_97990528
tx.7311	chr15	+	2805	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	80	-6	80	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1676	False	NA	NA	False	NA	NA	NA	98006426	98030328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
tx.7312	chr15	+	2336	19	NNC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12572	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	22.6396898290492	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	98018918	98030328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_98018951_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
tx.7313	chr15	-	2072	3	ISM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	2844	-1077	2844	0	3prime_fragment	FALSE	canonical	3	103	junction_2	11	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	98040696	98032517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_98034320_98039164_98039270_98040531
tx.7314	chr15	-	2176	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	1	-1077	1	0	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	98043586	98032517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
tx.7315	chr15	-	2331	9	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	351.279247003008	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGATCGATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	98432144	98416687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
tx.7316	chr15	-	2234	9	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	333	1154	313	-4	intron_retention	FALSE	canonical	1	385	junction_5	243.009130486902	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	NA	False	NA	NA	NA	98431812	98416692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398
tx.7317	chr15	-	2339	10	FSM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	-19	4	1	-4	multi-exon	FALSE	canonical	1	217	junction_2	304.537941847467	286	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	NA	False	NA	NA	NA	98432144	98416692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
tx.7318	chr15	-	2442	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	0	1154	0	-4	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	1074	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	NA	False	NA	NA	NA	98432145	98416692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
tx.7319	chr15	-	2137	10	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-33	-3	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	343.824388135198	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	NA	False	NA	NA	NA	98432178	98416691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
tx.732	chr1	-	3775	9	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-53	2	intron_retention	FALSE	canonical	3	19	junction_8	18.3196445107431	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTCCTGTAATATT	NA	False	NA	NA	False	NA	NA	NA	130390241	130366761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_130368117_130375355_130375377_130376064_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
tx.7320	chr15	-	2312	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-116	-21	-72	21	multi-exon	FALSE	canonical	3	20	junction_1	11.1439445440113	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGCAAAAACTTCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	98465633	98441070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
tx.7321	chr15	+	2542	12	NNC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.2619009246788	15	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	98530218	98542410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
tx.7322	chr15	+	2803	12	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.5121919525757	23	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	47	False	NA	NA	False	NA	NA	NA	98532650	98542410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
tx.7323	chr15	+	5343	13	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	-38	0	intron_retention	TRUE	non_canonical	0	0	junction_6	19.2287039489289	7	1	1	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	98530218	98542410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_98533095_98533174_98533283_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
tx.7324	chr15	-	3208	17	FSM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	-14	-7	-9	7	multi-exon	FALSE	canonical	3	15	junction_5	5.44252641243017	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCGAGCTCCATTCTCC	6985	False	NA	NA	False	NA	NA	NA	98560784	98543007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
tx.7325	chr15	-	1634	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	1	568	0	-568	multi-exon	FALSE	canonical	3	35	junction_3	4.54835134966506	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGGTTTTGTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	98575341	98567653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
tx.7326	chr15	-	705	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	31	-2	-15	2	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGTATTTTTCACTCG	NA	False	NA	NA	False	NA	NA	NA	98626048	98622248	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
tx.7327	chr15	-	3571	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	6	989	6	-989	multi-exon	FALSE	canonical	3	612	junction_3	18.4712614620659	552	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGCAGCCCTTTGTCCT	1805	False	NA	NA	False	NA	NA	NA	98661086	98635503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
tx.7328	chr15	-	3516	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	21	-992	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	257.430689701131	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1820	False	NA	NA	False	NA	NA	NA	98661071	98635506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_98636382_98636418_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
tx.7329	chr15	-	2042	12	NIC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	100.554249163292	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9502	False	NA	NA	False	NA	NA	NA	98729249	98710677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98728767
tx.733	chr1	-	2693	9	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-44	18	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	25.6855990780826	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAAATTTCTTAAATG	NA	False	NA	NA	False	NA	NA	NA	130390232	130366745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
tx.7330	chr15	-	1794	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	103.380465568487	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9502	False	NA	NA	False	NA	NA	NA	98729249	98710677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729015
tx.7331	chr15	-	1624	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	28	0	-5	0	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9377	False	NA	NA	False	NA	NA	NA	98729374	98710677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
tx.7332	chr15	-	1152	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	109	0	-37	0	multi-exon	FALSE	canonical	3	165	junction_2	21.3388598283861	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	98779252	98775658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
tx.7333	chr15	-	2209	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	95	0	-81	0	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTCCCTGTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	98816017	98801797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
tx.7334	chr15	+	691	2	Antisense	novelGene_ENSMUSG00000022999.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAACACTTGTACTTTCCT	NA	False	NA	NA	False	NA	NA	NA	98815506	98827433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr15_+_98815938_98827173
tx.7335	chr15	-	1611	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	128	4	1	-4	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	10403	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTGTTTCTGGATACT	159	False	NA	NA	False	NA	NA	NA	98832318	98829309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
tx.7336	chr15	-	1650	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	153	0	153	0	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	1116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTGTGTTCTATATT	NA	False	NA	NA	False	NA	NA	NA	98851431	98847717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
tx.7337	chr15	+	1555	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	430	-3	0	3	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	427	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATCTGGTTCATAGCT	NA	False	NA	NA	False	NA	NA	NA	98928201	98935994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
tx.7338	chr15	+	1809	9	FSM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	-51	-1	-44	1	multi-exon	FALSE	canonical	3	16	junction_2	6.35290287978653	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTACTGTGTTGGTCTGA	NA	False	NA	NA	False	NA	NA	NA	98953010	98956855	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
tx.7339	chr15	+	2254	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	7	-6	-2	0	multi-exon	FALSE	canonical	3	68	junction_1	8.88852727732572	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCAGCCAGTGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	98972865	98981290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
tx.734	chr1	-	2503	10	FSM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	30	0	17	0	multi-exon	FALSE	canonical	3	38	junction_3	13.0705587551887	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTGTCTCCTGTAATA	NA	False	NA	NA	False	NA	NA	NA	130390451	130366763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
tx.7340	chr15	+	1347	3	NIC	ENSMUSG00000038009.8	novel	381	3	NA	NA	-158	-88	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	26	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACCGTCTCCTCGATTA	3865	False	NA	NA	False	NA	NA	NA	98997134	99002530	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_98997195_98998703_98999657_99002196
tx.7341	chr15	+	4226	2	ISM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	-125	3	-125	-3	intron_retention	FALSE	canonical	3	51	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATACCACGGAATCCTAGC	3898	False	NA	NA	False	NA	NA	NA	98997167	99002615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_98997482_98998703
tx.7342	chr15	+	1547	3	FSM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	17	0	17	0	multi-exon	FALSE	canonical	3	51	junction_1	3.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACGGAATCCTAGCCCA	4040	False	NA	NA	False	NA	NA	NA	98997309	99002618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_98997482_98998703_98999657_99002196
tx.7343	chr15	+	3100	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	-5	1	-5	-1	multi-exon	FALSE	canonical	3	296	junction_2	25.9147909289056	516	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTAGCGCCGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	99024431	99111095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
tx.7344	chr15	+	3640	15	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	-289	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6.13787173112595	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGAACTCAGTACTTTT	NA	False	NA	NA	False	NA	NA	NA	99122452	99140699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_99122585_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
tx.7345	chr15	+	3996	15	FSM	ENSMUSG00000037579.8	ENSMUST00000041415.5	3698	15	-292	-6	-292	6	multi-exon	FALSE	canonical	3	10	junction_1	5.04520382468866	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCAGTACTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	99122449	99140704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99122933_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
tx.7346	chr15	-	1904	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	9	3	0	-2	multi-exon	FALSE	canonical	3	647	junction_2	85.1129201923742	935	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTTCTTTTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99149833	99140700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
tx.7347	chr15	+	3487	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-6	-2	combination_of_known_junctions	TRUE	canonical	3	14	junction_1	39.9788744213741	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	99192961	99214897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
tx.7348	chr15	+	3330	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_21	28.1893596947501	97	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	NA	False	NA	NA	NA	99192962	99214899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
tx.7349	chr15	+	3333	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_21	27.793351723029	60	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	NA	False	NA	NA	NA	99192962	99214899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
tx.735	chr1	-	2741	10	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	18.9912260443255	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTGTCTCCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	130390218	130366764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
tx.7350	chr15	+	3325	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	40.2403976123497	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	NA	False	NA	NA	NA	99193122	99214899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
tx.7351	chr15	-	4483	28	NIC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	5	15	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	12.2696051230895	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTTCTCTTTGTCAGA	NA	False	NA	NA	False	NA	NA	NA	99268325	99215090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
tx.7352	chr15	-	4410	27	FSM	ENSMUSG00000023008.19	ENSMUST00000088233.13	4423	27	16	-3	16	3	multi-exon	FALSE	canonical	3	33	junction_13	7.49447528272084	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCACCAAGCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	99268347	99215102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
tx.7353	chr15	+	2345	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	106	1	2	-1	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	1488	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	99290868	99307929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
tx.7354	chr15	+	2439	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	18	-1513	18	-1	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	99291117	99307929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
tx.7355	chr15	-	4876	13	FSM	ENSMUSG00000023009.15	ENSMUST00000023747.14	4853	13	-22	-1	-22	1	multi-exon	FALSE	canonical	3	12	junction_6	8.3877390676312	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGGCAGCCCCCC	NA	False	NA	NA	False	NA	NA	NA	99355651	99319914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
tx.7356	chr15	-	1261	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	15	0	-7	0	multi-exon	FALSE	canonical	3	84	junction_1	0	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTCGTTTCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	99372596	99367959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_99368961_99372336
tx.7357	chr15	-	2908	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	23	2	10	-2	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	756	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	99549514	99518379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
tx.7358	chr15	-	3030	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	20	2	-11	-1	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	99549504	99518378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
tx.7359	chr15	-	3010	18	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	197.839524637143	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATGTTGGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	99549515	99518380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541302_99541405_99549387
tx.736	chr1	-	2451	9	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	21.5982493503525	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTCCTGTAATATT	NA	False	NA	NA	False	NA	NA	NA	130390478	130366761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
tx.7360	chr15	+	4146	12	FSM	ENSMUSG00000023017.11	ENSMUST00000023758.9	4114	12	-30	-2	-30	0	multi-exon	FALSE	canonical	2	3	junction_5	2.84299923111125	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCAGTGTTGGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	99568218	99599011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99568776_99569664_99570043_99570748_99570945_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
tx.7361	chr15	+	3307	13	FSM	ENSMUSG00000023018.6	ENSMUST00000023759.6	3307	13	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_12	25.0281785638153	497	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTGCTGTCTGGAGGG	7541	False	NA	NA	False	NA	NA	NA	99600009	99611872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
tx.7362	chr15	+	605	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	2	1483	2	479	multi-exon	FALSE	canonical	3	1440	junction_1	0	216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTAGTGGTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	99623529	99625930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99623730_99625525
tx.7363	chr15	-	2006	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	91	-1	-45	1	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	186	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGTCTCTTTAGTAA	NA	False	NA	NA	False	NA	NA	NA	99670391	99633471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
tx.7364	chr15	-	4207	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	36	0	-4	0	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	2110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7274	False	NA	NA	False	NA	NA	NA	99773301	99676350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
tx.7365	chr15	+	6473	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	56	1	0	-1	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	552	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGGTTTCTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	99870716	99914238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
tx.7366	chr15	+	6476	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	543	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGGTTTCTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	99870716	99914238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
tx.7367	chr15	+	8911	38	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	7.50183809957063	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTTTAATTCTTAAAC	4857	False	NA	NA	False	NA	NA	NA	99936544	100117354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
tx.7368	chr15	+	8667	37	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-38552	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	7.58587665938209	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTAATTCTTAAACC	8572	False	NA	NA	False	NA	NA	NA	100013724	100117355	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
tx.7369	chr15	+	2338	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	31	-4	-21	4	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCGGAATGCAAAACAT	NA	False	NA	NA	False	NA	NA	NA	100125730	100159129	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
tx.737	chr1	-	2260	8	NIC	ENSMUSG00000026399.13	novel	3133	8	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	27.0630405399191	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCTGATTGATTTGCC	NA	False	NA	NA	False	NA	NA	NA	130390212	130374397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
tx.7370	chr15	+	1900	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	42	4	14	-4	multi-exon	FALSE	canonical	3	19	junction_1	0	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTGGCTGCATTTG	580	False	NA	NA	False	NA	NA	NA	100202683	100212232	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_100203226_100210874
tx.7371	chr15	-	2877	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	23	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	53.8380244062904	44	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	NA	NA	NA	100320913	100285778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_100286319_100286443_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
tx.7372	chr15	-	2138	17	FSM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	31	856	-22	-856	multi-exon	FALSE	canonical	1	67	junction_1	39.2515923243886	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGTGAGTTAGGTCTT	NA	False	NA	NA	False	NA	NA	NA	100320905	100286634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
tx.7373	chr15	-	4343	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-23	95	-23	-95	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTTTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	100320906	100290538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
tx.7374	chr15	+	2608	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	-297	-1089	-213	0	multi-exon	FALSE	canonical	3	74	junction_1	16.3587705833904	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2122	False	NA	NA	False	NA	NA	NA	100366690	100377045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
tx.7375	chr15	+	2413	8	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-16	11	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	35.7028553137003	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTATGCACACTCTACT	2319	False	NA	NA	False	NA	NA	NA	100366887	100377056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_100367127_100367565_100367718_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
tx.7376	chr15	+	2432	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	70	0	-14	0	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2405	False	NA	NA	False	NA	NA	NA	100366973	100377045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
tx.7377	chr15	+	2980	8	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-39	0	intron_retention	FALSE	canonical	3	81	junction_1	12.9362644830535	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2296	False	NA	NA	False	NA	NA	NA	100366864	100377045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
tx.7378	chr15	+	4977	7	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-213	0	intron_retention	FALSE	canonical	3	98	junction_1	7.80313327381308	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2122	False	NA	NA	False	NA	NA	NA	100366690	100377045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
tx.7379	chr15	-	4146	5	FSM	ENSMUSG00000044636.7	ENSMUST00000061457.7	4375	5	227	2	227	-2	multi-exon	FALSE	canonical	3	12	junction_4	9.28372231381357	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGTGGGTTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	100393142	100377452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_100380582_100382330_100382628_100385825_100386086_100387315_100387548_100392914
tx.738	chr1	-	3480	15	NIC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	7.01492577818678	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGAAATTTTCAATTCAC	3876	False	NA	NA	False	NA	NA	NA	130643594	130616918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_130618886_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
tx.7380	chr15	-	3500	15	ISM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	180	50	-39	-1	3prime_fragment	FALSE	canonical	3	68	junction_1	18.1805008799235	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	100449709	100400677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
tx.7381	chr15	-	3244	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	9	49	9	0	multi-exon	TRUE	canonical	3	68	junction_1	18.9415475139235	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	100449880	100400676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
tx.7382	chr15	-	3679	2	FSM	ENSMUSG00000009739.18	ENSMUST00000177335.2	3654	2	-22	-3	-22	0	multi-exon	FALSE	canonical	3	66	junction_1	0	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	8484	False	NA	NA	False	NA	NA	NA	100478134	100473198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_100476500_100477756
tx.7383	chr15	-	5042	11	NIC	ENSMUSG00000009739.18	novel	4953	11	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	17.0833252032501	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	100497949	100473198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100481911_100482041_100483755_100484010_100484524_100484654_100485669_100485792_100489721_100489915_100491853_100491947_100497643
tx.7384	chr15	+	1849	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	281	5	281	-5	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	1229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGCCAGCATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	100513510	100518637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
tx.7385	chr15	+	2026	4	NIC	ENSMUSG00000000346.10	novel	542	4	NA	NA	-54	-5	combination_of_known_junctions	FALSE	canonical	3	516	junction_1	340.746565972751	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGCCAGCATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	100513931	100518637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_100514204_100514793_100514913_100515805_100516052_100517248
tx.7386	chr15	-	1131	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	-6	10	3	-10	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTAAATTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	100534742	100519229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
tx.7387	chr15	-	1223	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	-203	-100	-203	-10	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	224	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTAAATTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	100535024	100519229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
tx.7388	chr15	-	2045	11	FSM	ENSMUSG00000098112.9	ENSMUST00000183211.8	2036	11	-15	6	-15	0	multi-exon	TRUE	canonical	2	83	junction_1	21.2593508837876	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGTGTCTTGCCCTGAA	NA	False	NA	NA	False	NA	NA	NA	100567449	100538963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
tx.7389	chr15	-	3745	11	ISM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	226	-1054	226	3	3prime_fragment	FALSE	canonical	3	77	junction_7	8.59127464349732	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	1900	False	NA	NA	False	NA	NA	NA	100618132	100589690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895
tx.739	chr1	-	3628	16	NIC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	6.66199836552233	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAAATTTTCAATTCA	3907	False	NA	NA	False	NA	NA	NA	130643563	130616919	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_130618886_130625642_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
tx.7390	chr15	-	3846	12	FSM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	-46	-1054	-46	3	multi-exon	FALSE	canonical	3	77	junction_7	8.71021059418435	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	1628	False	NA	NA	False	NA	NA	NA	100618404	100589690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
tx.7391	chr15	-	3792	12	NNC	ENSMUSG00000037280.13	novel	3796	12	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	26.9471475360673	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTTGGATTTGAGTT	1617	False	NA	NA	False	NA	NA	NA	100618415	100589693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618349
tx.7392	chr15	+	4592	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	9	7189	9	749	multi-exon	FALSE	canonical	3	11	junction_2	8.52355804031783	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTATCATGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	100659636	100714660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
tx.7393	chr15	+	3792	24	FSM	ENSMUSG00000023032.13	ENSMUST00000162049.2	3532	24	-259	-1	-259	1	multi-exon	FALSE	canonical	3	7	junction_1	9.00556433744809	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTCTCTGATACTCT	4256	False	NA	NA	False	NA	NA	NA	100678875	100713817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_100679220_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
tx.7394	chr15	+	1878	11	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.4198506063885	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTGGCCTTGCAGCT	6955	False	NA	NA	False	NA	NA	NA	100768811	100872648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303
tx.7395	chr15	+	1268	7	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-13	277	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	22.1560124771785	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGCTTGTGATTTCA	6956	False	NA	NA	False	NA	NA	NA	100768812	100857946	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100857575
tx.7396	chr15	+	4377	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	39	2	39	-2	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGATCCCGTCTGCC	NA	False	NA	NA	False	NA	NA	NA	101071986	101111563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
tx.7397	chr15	+	2038	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	-5	0	-5	0	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6236	False	NA	NA	False	NA	NA	NA	101122063	101130637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
tx.7398	chr15	+	1722	7	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4116	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	64.6838465151849	43	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	NA	False	NA	NA	False	NA	NA	NA	101126184	101130637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_101126281_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
tx.7399	chr15	+	2623	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	-70	0	-70	0	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	447	False	NA	NA	False	NA	NA	NA	101152079	101172676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
tx.74	chr1	-	2088	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	206	-113	1	113	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	256	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGGTCTGACGGTATGT	NA	False	NA	NA	False	NA	NA	NA	16689507	16639892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
tx.740	chr1	-	2872	10	FSM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	-22	4	-22	-4	multi-exon	FALSE	canonical	3	81	junction_6	17.0105268787113	208	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTTCATTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	131025585	130981440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
tx.7400	chr15	+	2517	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	-40	0	-40	0	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	101164686	101172676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
tx.7401	chr15	+	1251	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	19	0	19	0	multi-exon	FALSE	canonical	3	465	junction_2	16.5	319	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTGGCCTGTGTCCT	8049	False	NA	NA	False	NA	NA	NA	101182171	101188826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_101182427_101184813_101185132_101188148
tx.7402	chr15	+	2550	4	NNC	ENSMUSG00000116114.2	novel	833	4	NA	NA	-35	17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.05480466765633	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGATCCTTTCAATAT	888	False	NA	NA	False	NA	NA	NA	101262585	101303732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_101262699_101264782_101265322_101301319_101301441_101301955
tx.7403	chr15	+	1693	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	-110	2511	-110	13	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCTAGGAGTGGTACTC	NA	False	NA	NA	False	NA	NA	NA	101310172	101325683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
tx.7404	chr15	+	1022	8	NNC	ENSMUSG00000023039.18	novel	3563	8	NA	NA	2699	15	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	10.6885404971485	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTAGGAGTGGTACTCAC	NA	False	NA	NA	False	NA	NA	NA	101313028	101325685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_101313056_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
tx.7405	chr15	-	1803	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	146	9	146	-9	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGCTATGTATGCATT	6038	False	NA	NA	False	NA	NA	NA	101912771	101905141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
tx.7406	chr15	+	1404	7	FSM	ENSMUSG00000023043.8	ENSMUST00000023803.8	1437	7	28	5	28	-5	multi-exon	FALSE	canonical	3	28	junction_3	6.13731754650732	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCACTTTGTGTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	101936642	101940457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_101937110_101937900_101937984_101938257_101938415_101939053_101939219_101939329_101939456_101939730_101939955_101940275
tx.7407	chr15	+	3731	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	122	1	31	-1	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	1275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	-63	True	NA	NA	NA	101982329	102005607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
tx.7408	chr15	+	3666	14	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	8199	1	-4052	-1	3prime_fragment	FALSE	canonical	3	745	junction_2	66.2960903646145	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	101990406	102005607	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
tx.7409	chr15	+	3511	13	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	10400	2	-1851	-2	3prime_fragment	FALSE	canonical	3	745	junction_1	66.1337029559563	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	101992607	102005606	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
tx.741	chr1	-	2153	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	24	987	24	-987	multi-exon	FALSE	canonical	3	221	junction_1	9	300	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCATTGTTTTCATTCTC	261	False	NA	NA	False	NA	NA	NA	131066053	131056178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_131057983_131063996_131064109_131065816
tx.7410	chr15	+	4718	29	FSM	ENSMUSG00000037003.17	ENSMUST00000228958.2	4268	29	-46	-404	-46	0	multi-exon	FALSE	canonical	1	1	junction_1	4.23180378388532	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTTGATACCTTCTT	9312	False	NA	NA	False	NA	NA	NA	102008801	102024835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102008988_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
tx.7411	chr15	-	2437	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	19	0	19	0	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	308	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGGAAGGGGAATCCTT	NA	False	NA	NA	False	NA	NA	NA	102044650	102024962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
tx.7412	chr15	+	2245	15	FSM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	-37	0	-37	0	multi-exon	FALSE	canonical	3	11	junction_10	3.76408917893011	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATCTTGTCTCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	102058923	102071904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102059148_102059540_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
tx.7413	chr15	-	2293	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	34.0377941202339	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6643	False	NA	NA	False	NA	NA	NA	102112317	102085434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112130
tx.7414	chr15	-	2643	18	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	39.6618928436936	30	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTATGTTTTAAAGCT	6627	False	NA	NA	False	NA	NA	NA	102112333	102085431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
tx.7415	chr15	-	2309	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	28.5420547418873	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6260	False	NA	NA	False	NA	NA	NA	102112700	102085434	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112573
tx.7416	chr15	-	2511	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	39.7570257155889	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	6626	False	NA	NA	False	NA	NA	NA	102112334	102085433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571_102111696_102112130
tx.7417	chr15	-	2416	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	42.8278206569307	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6646	False	NA	NA	False	NA	NA	NA	102112314	102085432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102111571_102111696_102112130
tx.7418	chr15	-	2386	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	33.4241429708128	43	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTTGGTATGTTTTA	6624	False	NA	NA	False	NA	NA	NA	102112336	102085436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
tx.7419	chr15	+	4330	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.5699298148613	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	772	False	NA	NA	False	NA	NA	NA	102111948	102124036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
tx.742	chr1	+	1989	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	17	3	17	-3	multi-exon	FALSE	canonical	3	546	junction_5	43.4650340351123	578	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTATTTCTAATCT	NA	False	NA	NA	False	NA	NA	NA	131080934	131101212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
tx.7420	chr15	+	4373	8	FSM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	-136	4	-136	0	multi-exon	FALSE	canonical	0	0	junction_5	56.9883625785805	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	770	False	NA	NA	False	NA	NA	NA	102111946	102124036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
tx.7421	chr15	+	4123	7	FSM	ENSMUSG00000046897.18	ENSMUST00000141465.9	989	7	-172	-2962	-129	1	multi-exon	FALSE	canonical	0	0	junction_4	67.1203314122397	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTCCTCTTTGAGAAG	777	False	NA	NA	False	NA	NA	NA	102111953	102124037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102112238_102113005_102113319_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
tx.7422	chr15	+	4200	8	NIC	ENSMUSG00000046897.18	novel	3882	7	NA	NA	-125	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.0686520039925	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	781	False	NA	NA	False	NA	NA	NA	102111957	102124041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102112238_102113005_102113319_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
tx.7423	chr15	+	4411	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-136	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.5683069266455	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCCTCTTTGAGAAGA	770	False	NA	NA	False	NA	NA	NA	102111946	102124038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
tx.7424	chr15	+	4100	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-142	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.6824694190945	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTCCTCTTTGAGAAG	764	False	NA	NA	False	NA	NA	NA	102111940	102124037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102112238_102113005_102113319_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
tx.7425	chr15	+	4179	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-142	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.2157658862373	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	764	False	NA	NA	False	NA	NA	NA	102111940	102124039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102112238_102113005_102113319_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
tx.7426	chr15	+	4680	7	NIC	ENSMUSG00000046897.18	novel	3882	7	NA	NA	303	-1	intron_retention	FALSE	canonical	0	0	junction_4	56.6235129802295	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	1270	False	NA	NA	False	NA	NA	NA	102112446	102124039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
tx.7427	chr15	+	4625	7	ISM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	383	1	322	-1	3prime_fragment	FALSE	canonical	0	0	junction_4	57.2247032903332	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	1289	False	NA	NA	False	NA	NA	NA	102112465	102124039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
tx.7428	chr15	+	4571	6	NIC	ENSMUSG00000046897.18	novel	3882	7	NA	NA	332	0	intron_retention	FALSE	canonical	0	0	junction_3	68.3900577569576	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	1299	False	NA	NA	False	NA	NA	NA	102112475	102124036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
tx.7429	chr15	-	2251	13	ISM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	7319	0	7283	0	3prime_fragment	FALSE	canonical	3	39	junction_10	5.29150262212918	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCCTCTACTTTACT	3167	False	NA	NA	False	NA	NA	NA	102133060	102124429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992
tx.743	chr1	+	2203	14	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	28	731	28	-2	5prime_fragment	FALSE	canonical	3	546	junction_5	45.0821734931215	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTGTTTTGCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	131080945	131099245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
tx.7430	chr15	-	2646	15	FSM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	37	0	1	0	multi-exon	FALSE	canonical	3	29	junction_13	6.6719791758105	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCCTCTACTTTACT	NA	False	NA	NA	False	NA	NA	NA	102140342	102124429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
tx.7431	chr15	-	2704	8	FSM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	16	-2	16	0	multi-exon	FALSE	canonical	3	57	junction_4	9.19183310979738	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGTGGATCCCTCTA	NA	False	NA	NA	False	NA	NA	NA	102154919	102143372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
tx.7432	chr15	+	1748	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	1	5	1	-5	multi-exon	FALSE	canonical	3	355	junction_1	0	315	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACTTGTCCTCTCCTGT	NA	False	NA	NA	False	NA	NA	NA	102187889	102190184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102188065_102188611
tx.7433	chr15	+	6674	31	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	13	0	combination_of_known_junctions	TRUE	canonical	3	41	junction_1	69.6461213724226	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	372	False	NA	NA	False	NA	NA	NA	102204713	102232792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102204851_102205165_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
tx.7434	chr15	+	6642	31	FSM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	16	0	-12	0	multi-exon	FALSE	canonical	3	138	junction_1	58.1614706370692	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	375	False	NA	NA	False	NA	NA	NA	102204716	102232792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
tx.7435	chr15	+	6697	31	FSM	ENSMUSG00000058290.5	ENSMUST00000229050.2	6635	31	-17	-45	-13	0	multi-exon	FALSE	canonical	3	92	junction_1	63.2712063703195	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	374	False	NA	NA	False	NA	NA	NA	102204715	102232792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102204851_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
tx.7436	chr15	+	631	6	FSM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	48	383	-4	4	multi-exon	FALSE	canonical	3	835	junction_1	29.5932424718887	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	382	False	NA	NA	False	NA	NA	NA	102234598	102239925	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
tx.7437	chr15	+	1184	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	10	286	-1	2	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCAGTCCCTGATCCACC	5937	False	NA	NA	False	NA	NA	NA	102240153	102246288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
tx.7438	chr15	-	1759	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	49	3	-15	1	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	475	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCAGGATGTAACTCCGA	NA	False	NA	NA	False	NA	NA	NA	102259145	102246689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
tx.7439	chr15	+	7869	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-131	16	-84	-16	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTCTGGTGTATTGA	NA	False	NA	NA	False	NA	NA	NA	102314683	102344823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
tx.744	chr1	-	6531	22	ISM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	1893	1241	1893	-1241	3prime_fragment	TRUE	canonical	3	89	junction_2	12.5103132058289	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	NA	False	NA	NA	False	NA	NA	NA	131453192	131214229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675
tx.7440	chr15	+	8740	5	ISM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	350	13	-25	-13	3prime_fragment	FALSE	canonical	3	108	junction_1	17.1828402774396	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGGTGTATTGAGAG	NA	False	NA	NA	False	NA	NA	NA	102315164	102344826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
tx.7441	chr15	+	7802	6	NIC	ENSMUSG00000001280.14	novel	652	3	NA	NA	-15	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	52.4999047618184	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGGTGTATTGAGAG	NA	False	NA	NA	False	NA	NA	NA	102315174	102344826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102315279_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
tx.7442	chr15	+	7380	4	ISM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	1990	16	782	-16	3prime_fragment	FALSE	canonical	3	109	junction_2	16.0485374896143	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTCTGGTGTATTGA	1386	False	NA	NA	False	NA	NA	NA	102316804	102344823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_102318155_102334065_102334232_102338391_102338592_102339159
tx.7443	chr15	+	5996	3	ISM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	19288	13	18080	-13	3prime_fragment	FALSE	canonical	3	109	junction_1	18.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGGTGTATTGAGAG	2127	False	NA	NA	False	NA	NA	NA	102334102	102344826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_102334232_102338391_102338592_102339159
tx.7444	chr15	+	931	4	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6968	-3	12	0	3prime_fragment	FALSE	canonical	3	123	junction_2	13.3666251038423	31	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	102360769	102363068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_102360995_102361179_102361328_102361466_102361604_102362647
tx.7445	chr15	+	1060	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	12	-17	12	-7	multi-exon	FALSE	canonical	3	427	junction_1	130.244215056008	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTGGGCTAGTTTT	2417	False	NA	NA	False	NA	NA	NA	102367648	102371234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
tx.7446	chr15	+	1906	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	-863	-23	-12	-7	multi-exon	FALSE	canonical	3	623	junction_2	60	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTGGGCTAGTTTT	2423	False	NA	NA	False	NA	NA	NA	102367654	102371234	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102368582_102368804_102369155_102370605
tx.7447	chr15	+	1673	15	FSM	ENSMUSG00000056851.15	ENSMUST00000077037.13	2952	15	149	1130	22	50	multi-exon	FALSE	canonical	3	59	junction_1	143.98145076108	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTGTTGTTCCTGTCT	2169	False	NA	NA	False	NA	NA	NA	102379133	102407366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
tx.7448	chr15	+	1711	2	ISM	ENSMUSG00000056851.15	ENSMUST00000230631.2	585	3	1144	-1444	1144	1	3prime_fragment	FALSE	canonical	3	634	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGAATAAGAGTGTCTT	4999	False	NA	NA	False	NA	NA	NA	102399099	102408495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_+_102399239_102406923
tx.7449	chr15	-	3760	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	8	-418	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	18.6906351885108	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	102419127	102407877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
tx.745	chr1	-	6796	23	FSM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	-11	1241	-6	-1241	multi-exon	FALSE	canonical	3	89	junction_2	12.3013135091171	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	NA	False	NA	NA	False	NA	NA	NA	131455096	131214229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
tx.7450	chr15	-	3623	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	9	-418	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	14.0437411919569	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	102419126	102407877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
tx.7451	chr15	-	3713	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	8	597	8	-348	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAGGAATTTGGACAAG	NA	False	NA	NA	False	NA	NA	NA	102419127	102407807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
tx.7452	chr15	-	3711	16	FSM	ENSMUSG00000023050.10	ENSMUST00000169377.8	4210	16	79	420	-10	-420	multi-exon	FALSE	canonical	2	4	junction_15	20.3004105048806	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	102425420	102407879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102425222
tx.7453	chr15	+	1470	8	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	125.715584408876	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	102426843	102432111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102427038_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
tx.7454	chr15	+	1574	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-51	0	-19	0	multi-exon	TRUE	canonical	3	312	junction_3	28.7706447616316	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	102426842	102432111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
tx.7455	chr15	+	4177	5	NIC	ENSMUSG00000023051.12	novel	1819	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	365	junction_1	17.1245437895437	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	102426616	102432109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
tx.7456	chr15	+	1482	9	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	96.5083383703191	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	102427176	102432111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
tx.7457	chr15	-	7169	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	-28	6	-14	-6	multi-exon	FALSE	canonical	3	22	junction_11	10.1696355688543	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGGTATGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	102533913	102437076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533796
tx.7458	chr15	-	7098	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184485.8	2523	12	356	-4931	5	-5	multi-exon	FALSE	canonical	3	29	junction_11	8.85605736578731	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGGTATGTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	102533518	102437075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
tx.7459	chr15	-	2576	4	NIC	ENSMUSG00000062683.12	novel	731	5	NA	NA	80	0	intron_retention	FALSE	canonical	3	3206	junction_3	741.096634874442	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3981	False	NA	NA	False	NA	NA	NA	102579482	102571298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_102573683_102574197_102574291_102576145_102576215_102579452
tx.746	chr1	-	4316	21	ISM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	-4	9968	1	0	5prime_fragment	FALSE	canonical	3	115	junction_11	8.98943824718764	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGTTGCCAGATCTCTT	NA	False	NA	NA	False	NA	NA	NA	131455089	131222956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
tx.7460	chr15	-	678	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	53	0	53	0	multi-exon	FALSE	canonical	3	3206	junction_4	667.870870752723	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3954	False	NA	NA	False	NA	NA	NA	102579509	102571298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
tx.7461	chr15	-	2743	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	81	0	34	0	multi-exon	FALSE	canonical	3	88	junction_14	14.2851785613836	155	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTCATGACGTATGTT	NA	False	NA	NA	False	NA	NA	NA	102630532	102615211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
tx.7462	chr15	+	2480	2	FSM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	47	junction_1	0	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGCTTGGGATCCTT	NA	False	NA	NA	False	NA	NA	NA	102829518	102837249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102830353_102835603
tx.7463	chr15	+	2839	2	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4851	2246	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTTTTGAGAACCAT	NA	False	NA	NA	False	NA	NA	NA	102840340	102849290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_102840603_102846713
tx.7464	chr15	+	3207	2	FSM	ENSMUSG00000050328.3	ENSMUST00000055562.3	1031	2	69	-2245	69	2245	multi-exon	FALSE	canonical	3	24	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATGTTTTGAGAACCA	NA	False	NA	NA	False	NA	NA	NA	102845260	102849289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102845892_102846713
tx.7465	chr15	+	1940	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	43	0	43	0	multi-exon	FALSE	canonical	3	38	junction_1	0	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAATGTCTGATGGTTTC	6015	False	NA	NA	False	NA	NA	NA	102942863	102945278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_102943588_102944062
tx.7466	chr15	-	3300	4	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	47.3028070578856	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTGCAAATTACT	NA	False	NA	NA	False	NA	NA	NA	103071753	103061716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_103064629_103066043_103066346_103066552_103066584_103071698
tx.7467	chr15	-	3339	4	ISM	ENSMUSG00000036061.11	ENSMUST00000229371.2	3882	7	3766	1	1	-1	3prime_fragment	TRUE	canonical	3	65	junction_3	17.3781471969828	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTTTGCAAATTAC	NA	False	NA	NA	False	NA	NA	NA	103071753	103061717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr15_-_103064629_103066043_103066346_103066583_103066655_103071698
tx.7468	chr15	-	3258	3	FSM	ENSMUSG00000036061.11	ENSMUST00000231198.2	491	3	-1	-2766	-1	-4	multi-exon	FALSE	canonical	3	15	junction_2	46	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTGTTTTGCAAAT	NA	False	NA	NA	False	NA	NA	NA	103071746	103061720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103064629_103066043_103066346_103071698
tx.7469	chr15	-	8936	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-31	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	209.116809463037	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	103148274	103099972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123553_103148159
tx.747	chr1	-	3545	22	FSM	ENSMUSG00000026425.16	ENSMUST00000186543.7	3533	22	-12	0	-7	0	multi-exon	FALSE	canonical	3	29	junction_1	23.367225143015	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGCCAGATCTCTTG	NA	False	NA	NA	False	NA	NA	NA	131455097	131222955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_131223278_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
tx.7470	chr15	-	8821	5	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_4	192.229680330588	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	103148287	103099972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148183
tx.7471	chr15	-	8763	5	FSM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	39	-5141	-8	-2	multi-exon	FALSE	canonical	3	24	junction_4	189.635176061827	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	103123740	103099972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123694
tx.7472	chr15	-	8840	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-41	4	-41	-4	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	385	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTGAGTGGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	103148284	103099974	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
tx.7473	chr15	-	8948	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-47	-2	combination_of_known_splicesites	FALSE	canonical	3	31	junction_5	201.842512865848	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	103148290	103099972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103148159
tx.7474	chr15	-	8853	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	209.392072438285	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	103123726	103099972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123553_103123694
tx.7475	chr15	-	8857	6	FSM	ENSMUSG00000009575.15	ENSMUST00000122182.2	1146	6	-6	-7705	-6	-6	multi-exon	FALSE	canonical	3	10	junction_5	207.473757376686	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATCTTGAGTGGTAGT	NA	False	NA	NA	False	NA	NA	NA	103123738	103099976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103123694
tx.7476	chr15	+	1920	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	0	-2	0	2	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	2400	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	NA	False	NA	NA	NA	103148858	103153384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
tx.7477	chr15	+	1761	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	-22	-2	0	2	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	8184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	NA	False	NA	NA	NA	103148858	103153384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
tx.7478	chr15	-	1666	3	FSM	ENSMUSG00000058794.13	ENSMUST00000075192.13	1697	3	28	3	28	2	multi-exon	FALSE	canonical	0	0	junction_2	8	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTATTGTGTCTTCTT	4199	False	NA	NA	False	NA	NA	NA	103163838	103156641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103157876_103159355_103159526_103163576
tx.7479	chr15	+	1688	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	-15	3	-6	0	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	881	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	103181321	103208292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
tx.748	chr1	+	1400	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	-47	838	-47	-838	multi-exon	FALSE	canonical	3	32	junction_2	3.29983164553722	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAACGTTTACTGTTTT	NA	False	NA	NA	False	NA	NA	NA	131455593	131466772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
tx.7480	chr15	-	2263	7	FSM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	-29	-13	-29	0	multi-exon	FALSE	canonical	3	115	junction_6	27.1456974286698	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	8787	False	NA	NA	False	NA	NA	NA	103231966	103222321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103231817
tx.7481	chr15	-	2330	8	FSM	ENSMUSG00000000552.11	ENSMUST00000168828.3	2298	8	-32	0	-32	0	multi-exon	FALSE	canonical	3	18	junction_6	68.2405708519799	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	6887	False	NA	NA	False	NA	NA	NA	103248552	103222321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103241491_103241629_103248473
tx.7482	chr15	-	4367	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	10	5	-5	-5	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	447	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTTGCAGTCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	103275180	103252717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
tx.7483	chr15	-	715	9	FSM	ENSMUSG00000022487.15	ENSMUST00000023129.15	819	9	58	46	-3	7	multi-exon	FALSE	canonical	3	70	junction_8	17.7019596372831	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTTTTTTTTTAAACT	8420	False	NA	NA	False	NA	NA	NA	103338839	103310877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338782
tx.7484	chr15	+	3991	32	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-42521	4	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_2	4.21359970530981	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCCGCTGGAGCTGCTA	NA	False	NA	NA	False	NA	NA	NA	103319699	103406369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr15_+_103319946_103337911_103337955_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
tx.7485	chr15	+	4757	31	FSM	ENSMUSG00000022488.10	ENSMUST00000047405.9	4725	31	-33	1	0	0	multi-exon	FALSE	canonical	3	15	junction_9	3.63027394130097	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCGTGGATGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	103362220	103407236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_103362409_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
tx.7486	chr15	+	3198	16	FSM	ENSMUSG00000022489.7	ENSMUST00000023132.5	3218	16	21	-1	21	1	multi-exon	FALSE	canonical	2	9	junction_2	5.10163372525573	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTGTGTGGTGTTCATT	NA	False	NA	NA	False	NA	NA	NA	103411481	103438480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_+_103411800_103411887_103412011_103428375_103428490_103429732_103429916_103430079_103430147_103430471_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
tx.7487	chr15	-	1244	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	-2	64	-2	-64	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCTTCTGCTGCTGA	2050	False	NA	NA	False	NA	NA	NA	103446432	103438769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
tx.7488	chr16	+	3973	6	FSM	ENSMUSG00000022529.12	ENSMUST00000161630.8	3856	6	-119	2	20	-2	multi-exon	FALSE	canonical	2	13	junction_1	76.2532622252976	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTATAAATCTTTATT	NA	False	NA	NA	False	NA	NA	NA	3561976	3568652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_3563377_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
tx.7489	chr16	+	3237	6	FSM	ENSMUSG00000022529.12	ENSMUST00000023176.5	3241	6	13	-9	13	0	multi-exon	FALSE	canonical	3	89	junction_1	57.158026557956	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAATCTTTATTGG	NA	False	NA	NA	False	NA	NA	NA	3561969	3568654	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
tx.749	chr1	+	3533	13	FSM	ENSMUSG00000042251.13	ENSMUST00000112393.9	6900	13	20	3347	3	1738	multi-exon	FALSE	canonical	3	56	junction_3	6.31741420378799	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	131725138	131745852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
tx.7490	chr16	-	5658	3	FSM	ENSMUSG00000039789.8	ENSMUST00000090522.5	5668	3	-9	19	-9	-19	multi-exon	FALSE	canonical	3	7	junction_2	9.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTGGTGAACTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	3690269	3679410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_3684595_3689013_3689141_3689922
tx.7491	chr16	-	5578	3	FSM	ENSMUSG00000039789.8	ENSMUST00000119599.3	1842	3	7	-3743	7	-19	multi-exon	FALSE	canonical	3	18	junction_2	4	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTGGTGAACTTTTAAA	4397	False	NA	NA	False	NA	NA	NA	3702418	3679410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_3684595_3689013_3689141_3702151
tx.7492	chr16	+	2391	7	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.8141758178173	116	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	NA	False	NA	NA	NA	3702505	3722634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718744_3719648_3719990_3721329
tx.7493	chr16	+	3734	6	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_5	58.7823102642283	34	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	NA	False	NA	NA	NA	3702502	3722634	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718744_3719648
tx.7494	chr16	+	1608	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	169	2	-45	-2	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTGGCTGCTATTATT	3263	False	NA	NA	False	NA	NA	NA	3726857	3759009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
tx.7495	chr16	-	6292	16	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	13.6521874519149	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCTCTCTGAGAAAACC	NA	False	NA	NA	False	NA	NA	NA	3821601	3796986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821421
tx.7496	chr16	-	3307	5	ISM	ENSMUSG00000039738.17	ENSMUST00000156542.8	5116	14	8854	4	-1345	0	3prime_fragment	FALSE	canonical	3	45	junction_4	5.53962995154008	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACACTCCTCTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	3804728	3796991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854
tx.7497	chr16	-	5969	15	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-19	-7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	14.9829835452879	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAACTAGACAC	NA	False	NA	NA	False	NA	NA	NA	3821653	3797003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3816981_3817210_3818816_3819543_3821595
tx.7498	chr16	-	6165	16	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	9.12724858139991	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACACTCCTCTCTGAGAAA	NA	False	NA	NA	False	NA	NA	NA	3821651	3796989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
tx.7499	chr16	-	2304	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	10	6	10	-6	multi-exon	TRUE	canonical	3	963	junction_15	112.803285922348	1336	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGGCAGACGTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	3895681	3857840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
tx.75	chr1	-	1499	5	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-9	-358	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	178.300834266136	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	NA	NA	NA	16689492	16640363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_16641507_16652150_16652227_16655499_16655656_16672485_16672578_16689460
tx.750	chr1	+	4663	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	32	2	32	-2	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	5234	False	NA	NA	False	NA	NA	NA	131755746	131776601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
tx.7500	chr16	-	180	2	ISM	ENSMUSG00000005981.12	ENSMUST00000150354.3	431	5	8796	11866	8796	-2952	internal_fragment	FALSE	canonical	3	1272	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTCTCTGTACTCAGAA	8735	False	NA	NA	False	NA	NA	NA	3886843	3886145	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_3886203_3886720
tx.7501	chr16	-	3952	4	ISM	ENSMUSG00000022521.11	ENSMUST00000205765.2	7749	30	121500	-888	-2170	888	3prime_fragment	FALSE	canonical	3	49	junction_2	6.48074069840786	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAAGTTTTTAACATGT	NA	False	NA	NA	False	NA	NA	NA	3909777	3900676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655
tx.7502	chr16	-	5233	11	FSM	ENSMUSG00000005580.12	ENSMUST00000117801.8	4507	11	-679	-47	11	47	multi-exon	TRUE	canonical	2	3	junction_5	2.72763633939717	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGTTTTTTTTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	4238351	4105345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4106954_4112526_4112569_4115272_4115422_4116550_4116711_4122240_4122450_4125019_4125123_4129388_4129607_4130548_4130654_4141630_4141822_4235716_4237453_4237639
tx.7503	chr16	-	5155	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	-7	1393	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGTGACTTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	4359687	4296686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
tx.7504	chr16	-	1856	7	NNC	ENSMUSG00000005718.9	novel	2247	7	NA	NA	159	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	38.4953099596417	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTAGTTATTGAGGA	NA	False	NA	NA	False	NA	NA	NA	4376488	4362526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4376450
tx.7505	chr16	-	2173	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	72	2	72	-2	multi-exon	FALSE	canonical	3	103	junction_5	11.6010057035299	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTAGTTATTGAGGA	NA	False	NA	NA	False	NA	NA	NA	4377646	4362526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
tx.7506	chr16	+	1841	8	NIC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-8	233	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	45.2088125777915	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGCTAGAATATTTAAGAGA	NA	False	NA	NA	False	NA	NA	NA	4412568	4443021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4439472_4439571_4442333
tx.7507	chr16	+	3616	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	-2	5	-2	-5	multi-exon	FALSE	canonical	3	65	junction_1	16.3978318349985	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCCAGGGCTGGGACAC	NA	False	NA	NA	False	NA	NA	NA	4412574	4433816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
tx.7508	chr16	+	8228	5	ISM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	15583	-5091	-1114	-3876	3prime_fragment	FALSE	canonical	3	99	junction_3	6.37867541108654	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTCACCTGTTATTAT	NA	False	NA	NA	False	NA	NA	NA	4428159	4438912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
tx.7509	chr16	-	558	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	36	2	-16	-2	multi-exon	FALSE	canonical	3	1132	junction_4	70.3491293478462	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTCCTGTTTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	4442816	4434329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
tx.751	chr1	+	4191	10	ISM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	2121	2	2121	-2	3prime_fragment	FALSE	canonical	3	130	junction_3	12.7463381330667	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	7323	False	NA	NA	False	NA	NA	NA	131757835	131776601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
tx.7510	chr16	-	3500	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	45	751	10	493	multi-exon	TRUE	canonical	3	90	junction_15	10.2195380265448	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	NA	False	NA	NA	NA	4497596	4444747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
tx.7511	chr16	+	2839	2	FSM	ENSMUSG00000039646.6	ENSMUST00000038770.4	2829	2	-20	10	-20	-10	multi-exon	FALSE	canonical	2	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTCTGGTTGGGCTTG	NA	False	NA	NA	False	NA	NA	NA	4457784	4468656	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4458013_4466045
tx.7512	chr16	+	2491	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	14	0	-4	0	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	704	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	4501973	4525559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
tx.7513	chr16	+	2606	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	42	0	-2	0	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	4501975	4525559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
tx.7514	chr16	-	1192	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	-10	1258	-7	0	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTCCCAAAAGAAAAGG	4833	False	NA	NA	False	NA	NA	NA	4536983	4529180	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
tx.7515	chr16	-	3223	4	NIC	ENSMUSG00000063445.15	novel	1306	5	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	167	junction_3	9.79795897113271	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGGTTTCCCAAAAGA	4833	False	NA	NA	False	NA	NA	NA	4536983	4529185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_4531695_4532280_4532531_4534160_4534400_4536758
tx.7516	chr16	+	1210	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	27	493	27	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	NA	False	NA	NA	NA	4544253	4584113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
tx.7517	chr16	-	3145	5	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-5	1	intron_retention	FALSE	canonical	3	434	junction_4	30.8139578762612	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	NA	False	NA	NA	NA	4607804	4584703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4607694
tx.7518	chr16	-	2523	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	51	1379	-4	1	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	482	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	NA	False	NA	NA	NA	4607803	4584703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
tx.7519	chr16	-	2543	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	12	-1	12	1	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	NA	False	NA	NA	NA	4608144	4584703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
tx.752	chr1	+	1289	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	61	-148	45	0	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGTTGTGATGCTGGG	NA	False	NA	NA	False	NA	NA	NA	131795022	131800625	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
tx.7520	chr16	-	1856	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	-11	6	-11	4	multi-exon	FALSE	canonical	3	334	junction_1	8.5	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCTGTAGTCTTG	NA	False	NA	NA	False	NA	NA	NA	4698190	4692647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4693734_4694225_4694286_4697480
tx.7521	chr16	+	3226	18	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	136.27729719254	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2905	False	NA	NA	False	NA	NA	NA	4704093	4756160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
tx.7522	chr16	+	3147	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	-9	0	-6	0	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2918	False	NA	NA	False	NA	NA	NA	4704106	4756160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
tx.7523	chr16	+	3101	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	-5	-1	-5	0	multi-exon	TRUE	canonical	3	266	junction_15	54.4223810169636	397	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2919	False	NA	NA	False	NA	NA	NA	4704107	4756160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
tx.7524	chr16	+	3161	17	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	118.010592744889	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2925	False	NA	NA	False	NA	NA	NA	4704113	4756160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
tx.7525	chr16	+	3097	16	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	107.073474254312	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2926	False	NA	NA	False	NA	NA	NA	4704114	4756160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
tx.7526	chr16	+	1265	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	354	-1	3	1	multi-exon	FALSE	canonical	3	527	junction_2	18	282	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTTCTGAGTGCCAT	98	False	NA	NA	False	NA	NA	NA	4756978	4758884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4757158_4757241_4757503_4758059
tx.7527	chr16	-	2339	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	20.4717691793683	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8197	False	NA	NA	False	NA	NA	NA	4782063	4759295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
tx.7528	chr16	-	2433	17	FSM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	-31	-4	0	4	multi-exon	FALSE	canonical	3	59	junction_1	12.8608842522589	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8192	False	NA	NA	False	NA	NA	NA	4782068	4759295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
tx.7529	chr16	-	2532	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	2	intron_retention	FALSE	canonical	3	70	junction_1	11.019175206077	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGGGCTCATTTGTGA	8192	False	NA	NA	False	NA	NA	NA	4782068	4759297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
tx.753	chr1	+	6048	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-51	1	-29	-1	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	534	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGTGCTTCGTGTGCT	9253	False	NA	NA	False	NA	NA	NA	131838242	131864058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
tx.7530	chr16	-	1932	10	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	413	junction_6	42.8808282580778	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	4831410	4826593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
tx.7531	chr16	-	1387	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	-32	0	4	0	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	4831413	4826593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
tx.7532	chr16	-	3286	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	-1	-5	-1	5	multi-exon	FALSE	canonical	3	303	junction_6	221.604291976086	516	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8109	False	NA	NA	False	NA	NA	NA	4867728	4831767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
tx.7533	chr16	-	3303	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-7	-4	-1	4	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	1400	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8109	False	NA	NA	False	NA	NA	NA	4867728	4831768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
tx.7534	chr16	+	6384	18	FSM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	-30	2	-30	2	multi-exon	FALSE	canonical	3	47	junction_17	11.4435578952107	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	4867890	4904151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
tx.7535	chr16	+	6293	17	FSM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	-706	2	-29	2	multi-exon	FALSE	canonical	3	39	junction_16	12.0167526291424	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	4867891	4904151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
tx.7536	chr16	+	4190	8	ISM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	21572	2	-1124	2	3prime_fragment	FALSE	canonical	3	39	junction_7	13.6486524714242	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	3858	False	NA	NA	False	NA	NA	NA	4890169	4904151	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
tx.7537	chr16	-	6297	22	FSM	ENSMUSG00000039457.5	ENSMUST00000035672.5	6217	22	-79	-1	-79	1	multi-exon	FALSE	canonical	2	2	junction_13	2.19564607302829	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTGGAAACCTCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	4950364	4904153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_4907693_4909708_4909802_4910228_4910346_4911059_4911144_4912272_4912424_4914489_4914684_4915508_4915648_4915738_4915918_4917846_4918005_4918194_4918293_4919237_4919390_4920157_4920305_4920419_4920543_4922314_4922411_4922537_4922646_4922727_4922890_4923786_4923829_4923914_4924035_4924625_4924747_4925320_4925476_4930855_4930956_4950145
tx.7538	chr16	-	1968	9	FSM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	265	-3	-260	3	multi-exon	FALSE	canonical	3	106	junction_1	8.42244026396151	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCAGGGGGCGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	5021601	5013149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204
tx.7539	chr16	-	2138	10	FSM	ENSMUSG00000023143.11	ENSMUST00000023911.11	2143	10	8	-3	-2	3	multi-exon	FALSE	canonical	3	106	junction_1	7.98764478027175	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCAGGGGGCGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	5021868	5013149	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
tx.754	chr1	+	6044	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	-28	-3641	-28	-1	multi-exon	FALSE	canonical	3	331	junction_5	461.648284832608	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGTGCTTCGTGTGCT	9254	False	NA	NA	False	NA	NA	NA	131838243	131864058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
tx.7540	chr16	+	1756	13	FSM	ENSMUSG00000039427.15	ENSMUST00000100196.9	1755	13	4	-5	4	-4	multi-exon	TRUE	canonical	3	181	junction_11	10.4029910228848	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTTTGCTCTGAGCC	1284	False	NA	NA	False	NA	NA	NA	5051488	5062772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
tx.7541	chr16	-	2135	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	33	2	6	-2	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	NA	False	NA	NA	NA	5073814	5062017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
tx.7542	chr16	-	2111	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.156061384151	38	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	NA	False	NA	NA	NA	5073814	5062017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_5063250_5065340_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
tx.7543	chr16	-	4201	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	6	-3220	6	-3	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTATGTGCGCATGTGCA	NA	False	NA	NA	False	NA	NA	NA	5073814	5062018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
tx.7544	chr16	-	2214	7	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	7	-3	intron_retention	FALSE	canonical	3	270	junction_1	79.2199820471802	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTATGTGCGCATGTGCA	NA	False	NA	NA	False	NA	NA	NA	5073813	5062018	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_5063250_5065316_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
tx.7545	chr16	-	2896	6	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-661	intron_retention	FALSE	canonical	3	438	junction_1	20.4215572373901	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCTCTACCTTTAGA	NA	False	NA	NA	False	NA	NA	NA	5073813	5063403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
tx.7546	chr16	-	1810	3	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	5.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGACAATGC	NA	False	NA	NA	False	NA	NA	NA	7769539	7748194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_-_7749899_7768342_7768423_7769513
tx.7547	chr16	+	1350	11	FSM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	-8	483	-8	5	multi-exon	FALSE	canonical	3	136	junction_3	20.7113495455994	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCCTTGAGATGCTGT	NA	False	NA	NA	False	NA	NA	NA	8288643	8308065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
tx.7548	chr16	+	4585	16	FSM	ENSMUSG00000057880.13	ENSMUST00000065987.14	4636	16	51	0	-1	0	multi-exon	FALSE	canonical	2	6	junction_13	3.20138858761146	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGAATGTGGGCT	NA	False	NA	NA	False	NA	NA	NA	8331343	8439432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_8331439_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
tx.7549	chr16	-	2711	2	NNC	ENSMUSG00000043140.11	novel	3391	2	NA	NA	216	-648	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTGGGTTAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	8455360	8451740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_8454257_8455165
tx.755	chr1	+	3225	5	FSM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	-16	3	-16	2	multi-exon	FALSE	canonical	3	24	junction_4	4.65698400254929	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGTGTTTGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	131890688	131910704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485_131906752_131909028
tx.7550	chr16	-	2870	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	26	495	26	-495	multi-exon	FALSE	canonical	3	58	junction_1	0	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTTTTTGTCCCTGC	NA	False	NA	NA	False	NA	NA	NA	8455550	8451587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_8454257_8455349
tx.7551	chr16	+	1732	8	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	5	21	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	59.2149319282333	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGATCTTGCTGATG	NA	False	NA	NA	False	NA	NA	NA	8455591	8475416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_8455693_8460601_8460714_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
tx.7552	chr16	+	1794	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	50	-2	1	2	multi-exon	FALSE	canonical	3	143	junction_5	22.2528088114737	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGGCCGAATCATAC	NA	False	NA	NA	False	NA	NA	NA	8455587	8475397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
tx.7553	chr16	-	2814	3	ISM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	7731	3	7731	-3	3prime_fragment	FALSE	canonical	3	357	junction_2	26	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGACTGTAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	8482288	8476446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_8478968_8481450_8481574_8482118
tx.7554	chr16	-	2856	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	1	1	1	-1	multi-exon	TRUE	canonical	3	300	junction_3	44.5146667465405	275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGACTGTAAAAGGTTGT	NA	False	NA	NA	False	NA	NA	NA	8490018	8476444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
tx.7555	chr16	-	4735	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8911	0	at_least_one_novel_splicesite	FALSE	canonical	2	100	junction_31	169.206103657901	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	NA	NA	NA	8601261	8507463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
tx.7556	chr16	-	5149	31	FSM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	-603	-543	-525	-3	multi-exon	FALSE	canonical	2	328	junction_30	128.088897081502	478	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6007	False	NA	NA	False	NA	NA	NA	8556809	8507466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
tx.7557	chr16	-	4800	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-63	8	-63	-3	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	618	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	NA	NA	NA	8610235	8507466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
tx.7558	chr16	-	5321	32	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-522	-3	combination_of_known_junctions	FALSE	canonical	2	74	junction_30	229.957200922222	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6010	False	NA	NA	False	NA	NA	NA	8556806	8507466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
tx.7559	chr16	+	4824	3	ISM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	1	11797	1	2994	5prime_fragment	FALSE	canonical	3	177	junction_1	10	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAATACCCAGAGTAC	9945	False	NA	NA	False	NA	NA	NA	8647964	8664989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_8648550_8649184_8649266_8660831
tx.756	chr1	-	2891	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	0	928	intron_retention	FALSE	canonical	2	6	junction_3	40.998257802706	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTGAGCAGTCTCA	597	False	NA	NA	False	NA	NA	NA	132067422	132041395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
tx.7560	chr16	+	3350	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	1	721	1	-721	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGTTACTTTTTTCCA	9945	False	NA	NA	False	NA	NA	NA	8647964	8676065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
tx.7561	chr16	+	3486	3	ISM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	1219	2	-2	-2	3prime_fragment	FALSE	canonical	3	157	junction_2	20	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAACAGGGGCTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	8649182	8676784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_8649266_8660831_8661108_8673657
tx.7562	chr16	+	5907	6	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.7164589551735	13	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	8970681	9045870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767
tx.7563	chr16	+	4499	7	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.9582821457049	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGTTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	8970687	9044380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9036624_9036713_9038336_9038565_9040402_9040532_9040767
tx.7564	chr16	+	515	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	9	281	9	0	multi-exon	FALSE	canonical	3	487	junction_1	5	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTGTGTTACAACTT	NA	False	NA	NA	False	NA	NA	NA	9988100	9992494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_9988189_9988278_9988356_9992144
tx.7565	chr16	+	3223	11	NNC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	36.5383360321731	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTACTGTCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	10010811	10060917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10058730
tx.7566	chr16	+	2545	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	236	-3	1	3	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACTGTCTTTTATGA	NA	False	NA	NA	False	NA	NA	NA	10010811	10060918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
tx.7567	chr16	+	2166	11	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	962	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	41.4305442880009	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGGCATTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	10010811	10070304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10065308_10065462_10069241
tx.7568	chr16	-	3425	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	11	4	11	-4	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATAATTGTATGGTGT	NA	False	NA	NA	False	NA	NA	NA	10131821	10099616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
tx.7569	chr16	-	3272	4	NIC	ENSMUSG00000022505.10	novel	3440	5	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	58.1893461039046	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATAATTGTATGGTGT	NA	False	NA	NA	False	NA	NA	NA	10131831	10099616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_10102480_10103318_10103466_10105918_10106025_10131675
tx.757	chr1	-	2938	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	0	1417	0	932	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	597	False	NA	NA	False	NA	NA	NA	132067422	132041391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
tx.7570	chr16	+	2133	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-12	0	-12	0	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	490	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTTTGTCATTCTTTC	NA	False	NA	NA	False	NA	NA	NA	10229799	10242292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
tx.7571	chr16	-	1418	2	FSM	ENSMUSG00000038055.13	ENSMUST00000038281.6	1389	2	-30	1	-30	-1	multi-exon	FALSE	canonical	3	61	junction_1	0	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTTTGCCTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	10360948	10348071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_10348677_10360135
tx.7572	chr16	+	6283	24	NIC	ENSMUSG00000068663.15	novel	6189	24	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	19.7105711803867	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCCAGGAGTGTGGCC	NA	False	NA	NA	False	NA	NA	NA	10363274	10562735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10556255_10556380_10559477
tx.7573	chr16	+	6194	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	14	5	1	2	multi-exon	TRUE	canonical	3	10	junction_9	19.0952376045325	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCAGGAGTGTGGCCTG	NA	False	NA	NA	False	NA	NA	NA	10363241	10562737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
tx.7574	chr16	+	1724	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	3	2015	3	-2015	multi-exon	TRUE	canonical	3	158	junction_1	0	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATGAACAGAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	10652925	10659087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_10653255_10657692
tx.7575	chr16	-	1944	3	ISM	ENSMUSG00000022500.16	ENSMUST00000117360.8	763	4	8929	-1333	8929	-216	3prime_fragment	FALSE	canonical	3	340	junction_2	14	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCCTTGTGTTGTGTT	8635	False	NA	NA	False	NA	NA	NA	10784514	10777354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_10778916_10781120_10781278_10784288
tx.7576	chr16	-	2009	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	10	216	10	-216	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	310	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCCTTGTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	10810975	10777354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
tx.7577	chr16	+	2887	2	FSM	ENSMUSG00000037972.8	ENSMUST00000089011.6	2872	2	-22	7	-22	-7	multi-exon	FALSE	canonical	3	17	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCAATGTACAGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	10884171	10892842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_10884312_10890095
tx.7578	chr16	-	3095	12	FSM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	-3	3	-3	-3	multi-exon	FALSE	canonical	3	63	junction_7	19.5329769897639	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCGAATGTCATTTAGC	8531	False	NA	NA	False	NA	NA	NA	10952517	10892777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
tx.7579	chr16	-	4180	7	FSM	ENSMUSG00000022498.17	ENSMUST00000145225.8	2381	7	-82	-1717	-5	1	multi-exon	FALSE	canonical	3	19	junction_2	35.2120560162125	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTGAGATTAATGAG	8529	False	NA	NA	False	NA	NA	NA	10952519	10903381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
tx.758	chr1	-	2273	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	23206	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	47.932823363073	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAAGTTCTGTGACTCT	NA	False	NA	NA	False	NA	NA	NA	132206195	132179247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_132181184_132202453_132202560_132202761_132202875_132206077
tx.7580	chr16	-	3698	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-9	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	36.8186091171878	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	10994204	10954464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
tx.7581	chr16	-	5372	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-1	-9	intron_retention	FALSE	canonical	3	32	junction_4	32.0850042854914	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	10994207	10954464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
tx.7582	chr16	-	3764	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	52	9	0	-9	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	10994205	10954464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
tx.7583	chr16	-	4312	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-6	-8	intron_retention	FALSE	canonical	3	105	junction_12	19.807348781693	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	10994212	10954463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
tx.7584	chr16	-	1913	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	29	3	29	-3	multi-exon	FALSE	canonical	0	0	junction_8	907.175424049836	2550	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGCTGTACTGTTGGT	983	False	NA	NA	False	NA	NA	NA	11021166	11010836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
tx.7585	chr16	-	1840	12	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	15176	347	-1213	2	3prime_fragment	FALSE	canonical	3	1176	junction_9	170.184974718201	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCGGTATTTGAATTG	9256	False	NA	NA	False	NA	NA	NA	11056897	11038262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735
tx.7586	chr16	-	2974	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-78	2	-17	-2	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	755	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTTGTAAGTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	11072151	11037917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
tx.7587	chr16	-	2968	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	-17	765	-17	-5	multi-exon	FALSE	canonical	3	573	junction_12	261.982473319363	506	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCACCTTTGTAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	11072151	11037920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
tx.7588	chr16	-	2534	16	NNC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	390.942769326776	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCGGTATTTGAATTG	NA	False	NA	NA	False	NA	NA	NA	11072213	11038262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506_11072014_11072170
tx.7589	chr16	-	2700	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	-4	-33	-4	33	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGTGCTGTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	11727291	11621551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
tx.759	chr1	-	1274	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1956	6988	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAGAGAAGAAACCGGAG	NA	False	NA	NA	False	NA	NA	NA	132206193	132195465	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
tx.7590	chr16	+	3474	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_8	21.466252583998	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	12927553	12966598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
tx.7591	chr16	+	3722	11	NIC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	44	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	14.2270868416553	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	12927591	12966596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948887_12950721_12950815_12962264_12962378_12965389
tx.7592	chr16	+	2933	3	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	11564	-607	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	31.5	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCACATGCTATGGTGGG	NA	False	NA	NA	False	NA	NA	NA	12961818	12967874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_12962154_12962264_12962378_12965389
tx.7593	chr16	+	8239	17	FSM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	35	-2459	10	-7	multi-exon	FALSE	canonical	2	20	junction_16	15.0082008831838	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGATTTTGTGTGTACA	NA	False	NA	NA	False	NA	NA	NA	13074379	13235386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
tx.7594	chr16	+	4035	16	ISM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	35	4227	10	-4227	5prime_fragment	FALSE	canonical	2	22	junction_10	14.5961943289643	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCATGCAGTTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	13074379	13228700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480
tx.7595	chr16	-	2889	24	FSM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	16	1	-5	-1	multi-exon	FALSE	canonical	1	121	junction_21	52.0035988284976	390	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGCCTTTAACTGTTCT	NA	False	NA	NA	False	NA	NA	NA	13486018	13355824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
tx.7596	chr16	+	2898	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	100	5	8	-5	multi-exon	FALSE	canonical	3	82	junction_1	10.7760126660835	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACCTTTATAGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	13489821	13521471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
tx.7597	chr16	+	1654	7	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	54	4284	-38	39	5prime_fragment	TRUE	canonical	3	82	junction_1	11.6105794668292	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGCTCCTCAGGCTC	NA	False	NA	NA	False	NA	NA	NA	13489775	13517192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736
tx.7598	chr16	+	1675	2	FSM	ENSMUSG00000079737.5	ENSMUST00000225585.2	1705	2	30	0	30	0	multi-exon	FALSE	canonical	3	37	junction_1	0	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTACTTTGGTATCTTAA	NA	False	NA	NA	False	NA	NA	NA	13489822	13496252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13489943_13494697
tx.7599	chr16	-	959	4	FSM	ENSMUSG00000022683.14	ENSMUST00000023364.7	1423	4	466	-2	-74	0	multi-exon	FALSE	canonical	3	37	junction_3	8.17856276425687	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	NA	False	NA	NA	False	NA	NA	NA	13548381	13532920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_13533461_13542972_13543080_13545826_13545978_13548220
tx.76	chr1	-	1971	4	NNC	ENSMUSG00000079658.10	novel	2014	4	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_3	1156.21518566206	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTACGATCAGCACTT	NA	False	NA	NA	False	NA	NA	NA	16727113	16711956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_16713703_16715909_16716054_16718178_16718232_16727085
tx.760	chr1	-	1356	5	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1952	6968	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	39.6169155790806	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGGAGTTTGCTGAGT	NA	False	NA	NA	False	NA	NA	NA	132206197	132195485	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_132196405_132196619_132196718_132202453_132202560_132202761_132202875_132206077
tx.7600	chr16	+	3574	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	9	-1	9	1	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	1598	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	13598585	13632704	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
tx.7601	chr16	-	3215	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	16	997	16	10	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTGTCTGTCTTGTTT	10004	False	NA	NA	False	NA	NA	NA	13720975	13652008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
tx.7602	chr16	-	3002	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	-108	-14	2	9	multi-exon	FALSE	canonical	3	10	junction_1	45.2457020469238	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTTGTCTGTCTTGTT	9986	False	NA	NA	False	NA	NA	NA	13720993	13652009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
tx.7603	chr16	-	3308	23	FSM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	-130	0	15	0	multi-exon	FALSE	canonical	3	195	junction_15	13.5268328374224	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTAACTTTTGAATAA	10003	False	NA	NA	False	NA	NA	NA	13720976	13653455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
tx.7604	chr16	+	2329	5	FSM	ENSMUSG00000022679.14	ENSMUST00000148966.2	2315	5	-10	-4	-10	4	multi-exon	FALSE	canonical	3	36	junction_1	78.6431815226215	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGTATTGTCATTTT	511	False	NA	NA	False	NA	NA	NA	13758548	13766450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615
tx.7605	chr16	+	2446	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	20	621	-10	34	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACTTTTTGTATAATAA	511	False	NA	NA	False	NA	NA	NA	13758548	13766621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
tx.7606	chr16	+	2454	4	FSM	ENSMUSG00000022679.14	ENSMUST00000143697.8	580	4	-6	-1868	1	24	multi-exon	FALSE	canonical	3	17	junction_2	74.5311269798659	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTGTAATGTGACTTTT	522	False	NA	NA	False	NA	NA	NA	13758559	13766611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615
tx.7607	chr16	+	2153	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	29	212	-24	-212	multi-exon	TRUE	canonical	3	47	junction_1	4.9152822909778	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTGCTTAGTACTCC	NA	False	NA	NA	False	NA	NA	NA	13804496	13919152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
tx.7608	chr16	-	7750	27	FSM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	1	0	1	0	multi-exon	TRUE	canonical	2	10	junction_23	10.0957692234429	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAATGAGTGCTTTTGT	9817	False	NA	NA	False	NA	NA	NA	13977130	13927036	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959506_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
tx.7609	chr16	+	3738	8	ISM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	27	7	-2	3	intron_retention	FALSE	canonical	3	242	junction_7	27.7378397699251	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTTTTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	13981165	14010785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950
tx.761	chr1	+	2932	7	FSM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	-20	195	-20	0	multi-exon	FALSE	canonical	3	25	junction_6	6.54896090146283	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCTTGTTCACTTTGG	NA	False	NA	NA	False	NA	NA	NA	132243843	132261031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_132244211_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
tx.7610	chr16	+	2265	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	22	0	-1	0	multi-exon	FALSE	canonical	3	240	junction_8	30.8696857774743	304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	NA	False	NA	NA	NA	13981160	14010792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
tx.7611	chr16	-	1172	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	-18	-7	13	3	multi-exon	FALSE	canonical	3	67	junction_2	185.5	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTCATGGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	14135226	14117104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_14118074_14122317_14122452_14135157
tx.7612	chr16	-	1446	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	19	0	-9	0	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	NA	False	NA	NA	NA	14135220	14117107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
tx.7613	chr16	+	5911	31	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-6	833	combination_of_known_junctions	FALSE	canonical	3	25	junction_20	25.3100770445291	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	7150	False	NA	NA	False	NA	NA	NA	14179415	14292739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276887_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
tx.7614	chr16	+	5930	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	-1	863	1	832	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACCATTTTATTTTTATT	7157	False	NA	NA	False	NA	NA	NA	14179422	14292738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
tx.7615	chr16	+	2019	3	FSM	ENSMUSG00000022676.8	ENSMUST00000023356.8	2021	3	-3	5	-3	-5	multi-exon	FALSE	canonical	2	2	junction_2	2	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAGTTACTCATATA	NA	False	NA	NA	False	NA	NA	NA	14523712	14527244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_14523917_14524574_14525124_14525978
tx.7616	chr16	-	3403	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	7	-2174	7	-654	multi-exon	FALSE	canonical	3	117	junction_1	698.5	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATTTGGGTATGTGAAT	NA	False	NA	NA	False	NA	NA	NA	15412364	15371194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_15374408_15398922_15399072_15412323
tx.7617	chr16	-	3409	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	24	774	7	-774	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	750	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGTATATACTTTTCT	NA	False	NA	NA	False	NA	NA	NA	15412364	15371314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
tx.7618	chr16	-	3349	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	34	206	34	7	multi-exon	TRUE	canonical	3	1276	junction_6	130.715909088714	1783	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGTTTAAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	15455230	15441966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
tx.7619	chr16	+	6565	29	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	134159	-1691	134159	1691	3prime_fragment	FALSE	canonical	3	51	junction_1	15.3285031951617	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTACACTAAGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	15589911	15661790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
tx.762	chr1	-	2442	3	ISM	ENSMUSG00000042066.17	ENSMUST00000136828.3	2771	4	5995	-1	3871	0	3prime_fragment	FALSE	canonical	3	27	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGAGGTCTGCTGA	2971	False	NA	NA	False	NA	NA	NA	132288815	132284052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_132285556_132286640_132286777_132288012
tx.7620	chr16	-	642	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	391	2	-234	0	multi-exon	FALSE	canonical	3	566	junction_1	21	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	15680820	15666306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_15666594_15680261_15680408_15680611
tx.7621	chr16	-	1036	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	-3	2	-3	0	multi-exon	FALSE	canonical	3	566	junction_1	21	13	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	15681214	15666306	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_15666594_15680261_15680408_15680611
tx.7622	chr16	-	736	4	FSM	ENSMUSG00000022671.14	ENSMUST00000117136.2	758	4	28	-6	6	-1	multi-exon	FALSE	canonical	3	85	junction_3	237.265439727089	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTATGTGGAGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	15681205	15666307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_15666594_15680261_15680408_15680611_15680797_15681086
tx.7623	chr16	-	3250	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	32	0	-15	0	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	570	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1979	False	NA	NA	False	NA	NA	NA	15964683	15707087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
tx.7624	chr16	+	2947	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	-33	4	-33	-4	multi-exon	FALSE	canonical	3	76	junction_4	18.1995115929583	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTTGTCTGTGACCTTC	NA	False	NA	NA	False	NA	NA	NA	16031148	16090572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
tx.7625	chr16	+	1574	5	FSM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	-12	12	1	-4	multi-exon	FALSE	canonical	3	300	junction_2	32.9952648117878	253	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTCTTTACACAAGA	9507	False	NA	NA	False	NA	NA	NA	16120829	16127492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
tx.7626	chr16	+	1532	5	FSM	ENSMUSG00000022792.17	ENSMUST00000159683.2	1528	5	-8	4	-1	-4	multi-exon	FALSE	canonical	3	45	junction_2	137.095769446034	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTCTTTACACAAGA	9514	False	NA	NA	False	NA	NA	NA	16120836	16127492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073_16125245_16127195
tx.7627	chr16	-	4028	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	416	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	16176829	16130100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
tx.7628	chr16	-	4061	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	764	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	16176829	16130100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
tx.7629	chr16	-	3983	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	509	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	16176829	16130100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
tx.763	chr1	-	3914	5	FSM	ENSMUSG00000042066.17	ENSMUST00000045473.16	3410	5	-504	0	-504	0	multi-exon	FALSE	canonical	3	25	junction_4	2.38484800354236	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGAGGTCTGCTGA	NA	False	NA	NA	False	NA	NA	NA	132319523	132284052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308920_132318714
tx.7630	chr16	-	3949	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	-6	8	-6	0	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	226	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	16176829	16130101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
tx.7631	chr16	-	8439	17	FSM	ENSMUSG00000022788.17	ENSMUST00000162671.8	2714	17	-81	-5644	-20	-2	multi-exon	TRUE	canonical	2	6	junction_7	4.09219913371771	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGAGCCTTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	16417923	16234782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16417641
tx.7632	chr16	+	2942	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	108.44980917969	57	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGCCTGGGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	16688632	16710850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
tx.7633	chr16	+	2865	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	2	1	combination_of_known_junctions	TRUE	canonical	3	287	junction_1	39.4304608859032	384	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGCCTGGGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	16688622	16710850	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
tx.7634	chr16	+	4815	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	105	2	0	-2	multi-exon	FALSE	canonical	3	74	junction_7	6.62093155786084	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGTGCCACTTGGAT	NA	False	NA	NA	False	NA	NA	NA	16714437	16745226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
tx.7635	chr16	+	5039	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	22	38	22	-38	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	637	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATTACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16801267	16865279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
tx.7636	chr16	+	4246	5	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	42643	6	-1	-6	3prime_fragment	FALSE	canonical	3	513	junction_4	63.4916333070744	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTACATTGTCTCACTGT	NA	False	NA	NA	False	NA	NA	NA	16843888	16865311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
tx.7637	chr16	+	2811	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	448	63	-14	-63	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTCCCCTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	16888007	16904537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
tx.7638	chr16	-	2194	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	19	120	-2	-119	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	NA	NA	NA	16929102	16904538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
tx.7639	chr16	-	1763	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	1	1324	1	11	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	429	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGAGCCCCTGGGACTC	NA	False	NA	NA	False	NA	NA	NA	16929105	16906503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
tx.764	chr1	+	6163	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	-98	217	-98	-217	multi-exon	TRUE	canonical	3	42	junction_10	4.74561200830128	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCCTTTCTTGTGCAG	2827	False	NA	NA	False	NA	NA	NA	132345194	132394479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
tx.7640	chr16	-	1304	8	FSM	ENSMUSG00000049916.13	ENSMUST00000093336.8	1266	8	-38	0	-4	0	multi-exon	FALSE	canonical	3	35	junction_7	117.062516003464	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	16943008	16931261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16941375_16941519_16942853
tx.7641	chr16	-	1155	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	2	-1	2	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	16943002	16931261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
tx.7642	chr16	-	1131	7	NNC	ENSMUSG00000049916.13	novel	1266	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_6	94.3705756873166	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	16943003	16931261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942878
tx.7643	chr16	-	1084	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	24	0	24	0	multi-exon	FALSE	canonical	2	125	junction_1	37.5	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGCATGAGATGTG	NA	False	NA	NA	False	NA	NA	NA	16950223	16948001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_16948653_16949460_16949658_16949987
tx.7644	chr16	+	1505	4	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-27	0	3	0	intron_retention	TRUE	canonical	3	70	junction_3	17.4547032821147	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	NA	False	NA	NA	NA	16964815	16966710	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660
tx.7645	chr16	+	1316	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-20	1	10	-1	multi-exon	FALSE	canonical	3	70	junction_3	15.4171171105366	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGGTTTATAAAGT	NA	False	NA	NA	False	NA	NA	NA	16964822	16966709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
tx.7646	chr16	-	2603	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	5	1	5	-1	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	793	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGGGTGTATGGGTTTC	NA	False	NA	NA	False	NA	NA	NA	17019351	16969879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
tx.7647	chr16	+	6357	3	FSM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	-6	3	-6	-3	multi-exon	FALSE	canonical	3	75	junction_1	2.5	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGGAGTCTGTGACTA	6305	False	NA	NA	False	NA	NA	NA	17051429	17081291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17051595_17072831_17072931_17075198
tx.7648	chr16	+	6310	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	19454	-1	intron_retention	FALSE	canonical	3	13	junction_1	33.5	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGAGTCTGTGACTATA	638	False	NA	NA	False	NA	NA	NA	17070981	17081293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_17071098_17072831_17072931_17075198
tx.7649	chr16	+	1955	5	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-14	0	intron_retention	FALSE	canonical	3	265	junction_3	5.35607132140714	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094158	17096525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_17094333_17094497_17095115_17095205_17095457_17095532_17095756_17095835
tx.765	chr1	+	3504	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATACATGCTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	132405116	132433401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
tx.7650	chr16	+	1825	6	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	230	junction_3	17.5658760100372	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094162	17096525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
tx.7651	chr16	+	1407	10	FSM	ENSMUSG00000055692.22	ENSMUST00000164950.11	1631	10	224	0	-8	0	multi-exon	FALSE	canonical	3	122	junction_4	58.6725586266908	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094164	17096525	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
tx.7652	chr16	+	1718	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-13	-1	intron_retention	TRUE	canonical	3	186	junction_5	33.1331488928468	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	17094159	17096524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
tx.7653	chr16	-	6603	55	FSM	ENSMUSG00000041720.15	ENSMUST00000232232.2	6630	55	27	0	27	0	multi-exon	FALSE	canonical	3	103	junction_39	24.3659232686811	174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	NA	False	NA	NA	NA	17223730	17098215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
tx.7654	chr16	+	1923	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	29	1495	29	-1495	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTGACTATCTTAAAATC	1413	False	NA	NA	False	NA	NA	NA	17223878	17247196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
tx.7655	chr16	+	5060	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	-19	1	-19	-1	multi-exon	FALSE	canonical	3	254	junction_1	8	555	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGGTGTTTCAGTGTCT	3440	False	NA	NA	False	NA	NA	NA	17269831	17305297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17270653_17286756_17287223_17301524
tx.7656	chr16	+	2731	21	FSM	ENSMUSG00000022763.19	ENSMUST00000023448.15	2688	21	-46	3	6	1	multi-exon	FALSE	canonical	1	3	junction_11	2.45916652547159	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTCCTAGTGTAAT	4202	False	NA	NA	False	NA	NA	NA	17307480	17325346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17307756_17309156_17309348_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318353_17318399_17318610_17318708_17318789_17318903_17319316_17319404_17319954_17320047_17320129_17320261_17320359_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321507_17321626_17322781_17322881_17323547_17323624_17324093_17324199_17324990
tx.7657	chr16	+	3117	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	277	0	-8	0	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCGAGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	17326828	17344197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
tx.7658	chr16	-	1121	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	29	98	5	-2	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGCTGTTTGGCTTGGCT	7215	False	NA	NA	False	NA	NA	NA	17348971	17345943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
tx.7659	chr16	-	2303	5	FSM	ENSMUSG00000022756.18	ENSMUST00000172164.10	3281	5	50	928	0	4	multi-exon	FALSE	canonical	3	3	junction_4	5.33853912601566	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGGTATTCTTCATAG	NA	False	NA	NA	False	NA	NA	NA	17394535	17390809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17394503
tx.766	chr1	+	3616	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	12	-772	12	2	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTATACATGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	132405116	132433399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
tx.7660	chr16	-	2424	6	NIC	ENSMUSG00000022756.18	novel	1920	7	NA	NA	-4	1	intron_retention	FALSE	canonical	1	1	junction_4	6.71118469422501	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTACACTGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	17394539	17390818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393833_17393944_17394068_17394503
tx.7661	chr16	+	3203	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	1	1328	1	152	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	446	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	NA	False	NA	NA	NA	17437221	17461363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
tx.7662	chr16	-	3163	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	54.6468420290688	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	NA	False	NA	NA	NA	17540778	17469075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
tx.7663	chr16	-	3250	17	FSM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	-11	-9	0	-1	multi-exon	FALSE	canonical	3	37	junction_9	64.8068946467118	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	NA	False	NA	NA	NA	17540772	17469075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
tx.7664	chr16	-	3377	18	FSM	ENSMUSG00000012114.18	ENSMUST00000012259.9	3410	18	33	0	1	0	multi-exon	FALSE	canonical	3	173	junction_13	36.2216360814255	310	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	NA	False	NA	NA	NA	17540778	17469074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
tx.7665	chr16	-	3067	16	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	10	0	combination_of_known_junctions	TRUE	canonical	3	37	junction_9	78.1211594611572	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	NA	False	NA	NA	NA	17540801	17469074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
tx.7666	chr16	+	2578	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	113.988912716203	322	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	17577512	17611246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
tx.7667	chr16	+	3095	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	-7	178	-7	-178	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAGAGAGGATATTTA	NA	False	NA	NA	False	NA	NA	NA	17577519	17596892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
tx.7668	chr16	+	3662	4	NNC	ENSMUSG00000022750.19	novel	3266	4	NA	NA	-6	-156	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	186.763665274235	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATACTTTGGGGTAT	NA	False	NA	NA	False	NA	NA	NA	17577534	17596914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265
tx.7669	chr16	+	2535	6	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	1590	0	288	0	3prime_fragment	FALSE	canonical	3	453	junction_5	19.2707031527134	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	1057	False	NA	NA	False	NA	NA	NA	17582244	17611246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
tx.7671	chr16	-	4093	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	2	17	junction_3	136.210621220716	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	17709556	17658218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
tx.7672	chr16	-	4050	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	-5	0	-5	0	multi-exon	FALSE	non_canonical	0	0	junction_7	135.772503989233	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	17709562	17658218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
tx.7673	chr16	-	4103	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	172.23741868439	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	17709562	17658223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
tx.7674	chr16	-	4041	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-38	0	-5	0	multi-exon	FALSE	canonical	3	236	junction_7	73.3575717518876	341	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	17709562	17658218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
tx.7675	chr16	-	1447	7	FSM	ENSMUSG00000003166.21	ENSMUST00000155611.8	1468	7	-48	69	-4	-69	multi-exon	FALSE	non_canonical	0	0	junction_4	165.862392763801	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTTTACAGTTTAACT	NA	False	NA	NA	False	NA	NA	NA	17709561	17667243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
tx.7676	chr16	-	1438	7	ISM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-38	9026	-5	-70	5prime_fragment	FALSE	canonical	3	236	junction_4	83.6932228770977	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGTTTACAGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	17709562	17667244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
tx.7677	chr16	-	2801	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	18	2	-15	-2	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTTTCTATCAATT	NA	False	NA	NA	False	NA	NA	NA	17729194	17718574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
tx.7678	chr16	-	2805	10	FSM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	-22	2	11	-2	multi-exon	FALSE	canonical	3	90	junction_7	33.1126025018337	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTTTCTATCAATT	NA	False	NA	NA	False	NA	NA	NA	17729201	17718574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
tx.7679	chr16	-	1643	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	23	0	13	0	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	1471	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	17746060	17743086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
tx.7680	chr16	+	3499	2	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCTGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	17830195	17834851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_+_17830326_17831482
tx.7681	chr16	+	1044	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	24	18	-16	2	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGTGCTACCTAGGA	NA	False	NA	NA	False	NA	NA	NA	17884290	17889209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
tx.7682	chr16	+	1057	5	FSM	ENSMUSG00000003531.16	ENSMUST00000066027.14	1050	5	-21	14	19	1	multi-exon	FALSE	canonical	3	112	junction_3	141.891463802443	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGTGCTACCTAGG	NA	False	NA	NA	False	NA	NA	NA	17884285	17889208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887945_17888096_17888741
tx.7683	chr16	-	2253	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	129	4	0	-3	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	149	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCACCTTTCTCTTGGT	8072	False	NA	NA	False	NA	NA	NA	17907027	17889592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
tx.7684	chr16	-	1053	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	30	2	30	-2	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	4990	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCTGACAAGGCTATG	7163	False	NA	NA	False	NA	NA	NA	18066566	18057649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
tx.7685	chr16	+	2334	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	33	0	33	0	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	307	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	302	False	NA	NA	False	NA	NA	NA	18066779	18071366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
tx.7686	chr16	+	2602	11	FSM	ENSMUSG00000022721.20	ENSMUST00000127239.8	2805	11	203	0	-1	0	multi-exon	FALSE	canonical	3	250	junction_9	16.6400120192264	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	268	False	NA	NA	False	NA	NA	NA	18066745	18071366	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
tx.7687	chr16	-	4040	13	ISM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	4686	0	3	0	3prime_fragment	TRUE	canonical	3	159	junction_9	20.9528239942337	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	18102424	18071811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560
tx.7688	chr16	-	4453	12	FSM	ENSMUSG00000022718.13_ENSMUSG00000093246.3	ENSMUST00000115633.3	3436	12	-25	-992	3	0	multi-exon	FALSE	canonical	3	159	junction_9	19.9238218644403	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	18102424	18071811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
tx.7689	chr16	-	4384	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	65.4459194094402	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	18107111	18071811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
tx.7690	chr16	-	4308	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	10	2	-5	-2	multi-exon	FALSE	canonical	3	133	junction_13	25.6660390814434	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGGTTTCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	18107100	18071813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
tx.7691	chr16	-	1477	8	ISM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	19591	-2	0	0	3prime_fragment	FALSE	canonical	3	217	junction_3	15.6700676580595	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	18142315	18118688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220
tx.7692	chr16	-	1588	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_8	63.9256159532311	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	18161773	18118688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161661
tx.7693	chr16	-	1655	10	NNC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	98.3592558424297	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	18161776	18118688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18145446_18145608_18161758
tx.7694	chr16	-	1494	9	FSM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	130	-2	2	0	multi-exon	FALSE	canonical	3	71	junction_8	57.8273291792038	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	18161776	18118688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
tx.7695	chr16	-	1663	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	76.5371641753207	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	18165921	18118688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18165734
tx.7696	chr16	+	3973	19	FSM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	14	711	14	109	multi-exon	FALSE	canonical	3	22	junction_2	90.4391378459624	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	18166059	18225115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
tx.7697	chr16	+	3559	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-33	706	0	109	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	463	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	18210447	18225115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
tx.7698	chr16	+	562	4	FSM	ENSMUSG00000075704.18	ENSMUST00000131303.8	532	4	-30	0	-6	0	multi-exon	FALSE	canonical	3	135	junction_1	7.03957069398096	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCCCTGACTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	18245181	18256562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251
tx.7699	chr16	+	1893	17	NNC	ENSMUSG00000075704.18	novel	1878	18	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.2846975913857	98	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCTGCGTGTGCTGTC	NA	False	NA	NA	False	NA	NA	NA	18245180	18297820	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
tx.77	chr1	-	961	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	1	-2	1	2	multi-exon	TRUE	canonical	3	1066	junction_3	717.825574603995	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTTGTTTATTGC	NA	False	NA	NA	False	NA	NA	NA	16727265	16712988	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
tx.7700	chr16	+	1799	16	NNC	ENSMUSG00000075704.18	novel	1785	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.6416458208206	6	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCGTGTGCTGTCCCC	NA	False	NA	NA	False	NA	NA	NA	18245184	18297823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18293431_18293504_18294271_18294370_18296400_18296608_18297607
tx.7701	chr16	-	186	2	Antisense	novelGene_ENSMUSG00000116842.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCATTTTTTTAAATAA	7192	False	NA	NA	False	NA	NA	NA	18393642	18257817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr16_-_18257954_18393592
tx.7702	chr16	+	1449	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	40	-4	-31	2	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	NA	False	NA	NA	NA	18317502	18383294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
tx.7703	chr16	+	3408	7	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	97.958182688102	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTAGACTTGATTTGTCC	NA	False	NA	NA	False	NA	NA	NA	18317637	18385429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_18317702_18317795_18317891_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
tx.7704	chr16	+	3667	9	NIC	ENSMUSG00000000884.18	novel	1519	9	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	119.947840226492	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAGACTTGATTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	18317625	18385430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_18317702_18317795_18317891_18357141_18357247_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
tx.7705	chr16	+	1422	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	-8	2135	2	2	multi-exon	FALSE	canonical	3	212	junction_1	38.76564858485	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	NA	False	NA	NA	NA	18317629	18383294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
tx.7706	chr16	+	1444	7	ISM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	239	-4	12	2	3prime_fragment	FALSE	canonical	3	265	junction_4	25.8419340521478	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	NA	False	NA	NA	NA	18317701	18383294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
tx.7707	chr16	-	2140	11	NNC	ENSMUSG00000072214.8	novel	2143	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1.02469507659596	3	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCGAGTGTCCGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	18448700	18440560	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_18441547_18441664_18441768_18441854_18441991_18442070_18442168_18442860_18442963_18443096_18443215_18443332_18443468_18443558_18443683_18443918_18444006_18444094_18444192_18448545
tx.7708	chr16	+	1977	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	13	6	6	-1	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	303	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTAGTTTGATATGGTA	NA	False	NA	NA	False	NA	NA	NA	18631056	18654005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
tx.7709	chr16	+	1945	12	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	122.971810248132	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTAGTTTGATATGGTA	NA	False	NA	NA	False	NA	NA	NA	18631062	18654005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
tx.771	chr1	-	7051	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	54	0	-5	0	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	NA	False	NA	NA	NA	132953100	132913957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
tx.7710	chr16	+	1334	3	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	-1	0	intron_retention	TRUE	canonical	0	0	junction_2	88.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	18655329	18658910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_18655624_18657839_18658618_18658648
tx.7711	chr16	+	1278	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	3	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	45.5	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	18655330	18658910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18655370_18655455_18655624_18657839
tx.7712	chr16	+	1247	4	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.2695571377664	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	18655330	18658910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_18655370_18655455_18655624_18657839_18658618_18658648
tx.7713	chr16	+	1364	2	FSM	ENSMUSG00000071632.11	ENSMUST00000190776.2	930	2	-74	-360	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	18655330	18658910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18655624_18657839
tx.7714	chr16	-	975	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	299	6	-24	-6	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	409	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATCTGTCGTTTATT	NA	False	NA	NA	False	NA	NA	NA	18695313	18690773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
tx.7715	chr16	-	1066	4	FSM	ENSMUSG00000022706.17	ENSMUST00000119273.2	778	4	-79	-209	-9	1	multi-exon	FALSE	canonical	3	71	junction_3	827.835061403471	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCGTTTATTTTAATCA	NA	False	NA	NA	False	NA	NA	NA	18695368	18690766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_18691413_18692286_18692446_18694073_18694187_18695220
tx.7716	chr16	+	4273	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_15	33.301547344764	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	18695969	18789059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
tx.7717	chr16	+	2362	13	NIC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	-36	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	28.1553231596127	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGCTGATTATCCAGAT	NA	False	NA	NA	False	NA	NA	NA	18695983	18746762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
tx.7718	chr16	+	4068	25	FSM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	150	0	-54	0	multi-exon	TRUE	canonical	3	33	junction_15	30.9156277902725	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	18695965	18789059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
tx.7719	chr16	+	2154	13	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	168	42296	-36	2	5prime_fragment	FALSE	canonical	3	103	junction_2	13.4109718762909	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTGATTATCCAGATT	NA	False	NA	NA	False	NA	NA	NA	18695983	18746763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
tx.772	chr1	-	7055	11	FSM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	-7	-5134	-6	0	multi-exon	FALSE	canonical	3	161	junction_9	94.8116026654966	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	NA	False	NA	NA	NA	132953101	132913957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
tx.7720	chr16	+	885	2	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGATAAGGAATCTGC	NA	False	NA	NA	False	NA	NA	NA	18854511	18859454	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_+_18854906_18858963
tx.7721	chr16	+	4185	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	93	-20	-72	20	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTGGGCATCATT	NA	False	NA	NA	False	NA	NA	NA	19579076	19591233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
tx.7722	chr16	+	4278	5	FSM	ENSMUSG00000022686.15	ENSMUST00000121344.8	4175	5	143	-246	-48	16	multi-exon	FALSE	canonical	2	7	junction_3	34.3829536253068	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCCTGTGTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	19579100	19591229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19584250_19584372_19587493
tx.7723	chr16	+	4133	3	FSM	ENSMUSG00000022686.15	ENSMUST00000131557.8	444	3	-42	-3647	-42	22	multi-exon	FALSE	canonical	3	81	junction_1	14.5	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGGGCATCATTCT	NA	False	NA	NA	False	NA	NA	NA	19579293	19591235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_19579578_19583857_19583965_19587493
tx.7724	chr16	+	4077	3	FSM	ENSMUSG00000022686.15	ENSMUST00000119468.2	2229	3	8	-1856	8	17	multi-exon	FALSE	canonical	3	9	junction_1	50.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCCTGTGTGGGCATC	NA	False	NA	NA	False	NA	NA	NA	19579811	19591230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_19580045_19583857_19583965_19587493
tx.7725	chr16	+	7659	9	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_8	30.5276514000013	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGAGTTTTAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	19916310	19947971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19942564_19943057
tx.7726	chr16	+	4561	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	29	3582	-3	-3582	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACCTGAATCCTAGAA	NA	False	NA	NA	False	NA	NA	NA	19916320	19944389	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
tx.7727	chr16	+	4506	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	5	-3577	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTGAATCCTAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	19916317	19944394	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
tx.7728	chr16	+	7902	6	ISM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	9198	0	9148	0	3prime_fragment	FALSE	canonical	3	79	junction_2	7.88416133777081	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGAGTTTTAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	19925489	19947971	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
tx.7729	chr16	+	5985	30	FSM	ENSMUSG00000041215.17	ENSMUST00000090052.11	5997	30	8	4	4	-4	multi-exon	FALSE	canonical	3	35	junction_1	34.7469534332064	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	NA	False	NA	NA	NA	19959820	20051319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
tx.773	chr1	-	6992	10	FSM	ENSMUSG00000054387.14	ENSMUST00000191212.7	2799	10	-11	-4182	-11	0	multi-exon	FALSE	canonical	3	144	junction_5	107.251521615728	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	NA	False	NA	NA	NA	132953106	132913957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
tx.7730	chr16	+	6094	31	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	5	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	37.8088173137784	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	NA	False	NA	NA	NA	19959821	20051319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
tx.7731	chr16	+	5937	30	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	37.819554046182	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	NA	False	NA	NA	NA	19959817	20051319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
tx.7732	chr16	+	6097	31	FSM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	11	4	11	-4	multi-exon	FALSE	canonical	3	106	junction_10	25.0014444027185	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	NA	False	NA	NA	NA	19959827	20051319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
tx.7733	chr16	+	5972	30	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	44.8334744143461	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	NA	False	NA	NA	NA	19959824	20051319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
tx.7734	chr16	-	3241	3	FSM	ENSMUSG00000041205.9	ENSMUST00000040880.9	3280	3	28	11	28	-11	multi-exon	FALSE	canonical	3	61	junction_2	5	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGAAGAGTATTCAATA	NA	False	NA	NA	False	NA	NA	NA	20060080	20052063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_20054790_20055336_20055455_20059683
tx.7735	chr16	-	1327	10	FSM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	18	3	-8	-3	multi-exon	FALSE	canonical	3	1528	junction_6	107.954723019524	879	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	NA	False	NA	NA	NA	20121119	20098572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
tx.7736	chr16	-	2326	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	63998	0	1610	0	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	NA	False	NA	NA	NA	20181146	20150052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
tx.7737	chr16	-	3493	16	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	1140	0	intron_retention	TRUE	canonical	2	15	junction_15	117.179330752294	31	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	NA	False	NA	NA	NA	20194252	20150052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20194136
tx.7738	chr16	-	5892	25	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	25481	3	-627	0	3prime_fragment	FALSE	canonical	3	244	junction_20	68.1710343955228	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	NA	False	NA	NA	NA	20219663	20150055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555
tx.7739	chr16	-	5768	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	43	0	2	0	multi-exon	FALSE	canonical	3	160	junction_25	98.9917903368873	244	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	NA	False	NA	NA	NA	20245101	20150052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
tx.774	chr1	-	6988	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	NA	False	NA	NA	NA	132953105	132913957	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
tx.7740	chr16	-	4553	5	FSM	ENSMUSG00000022822.17	ENSMUST00000134962.2	4526	5	-28	1	1	0	multi-exon	FALSE	canonical	3	182	junction_2	11.3578166916005	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	NA	False	NA	NA	NA	20245102	20219510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
tx.7741	chr16	+	2482	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	72	0	72	0	multi-exon	TRUE	canonical	3	2657	junction_7	154.998007155648	3759	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	20317638	20328073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
tx.7742	chr16	+	4837	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	22	-2340	22	1	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	162	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	NA	False	NA	NA	NA	20335753	20352761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
tx.7743	chr16	+	1905	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	26	149	-15	-149	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	2733	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGGCTAAATGTTAAT	1379	False	NA	NA	False	NA	NA	NA	20354253	20362657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
tx.7744	chr16	+	2455	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	78	557	11	4	multi-exon	TRUE	canonical	3	293	junction_13	17.6705970470723	366	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCTCTCTGCTCGTTC	NA	False	NA	NA	False	NA	NA	NA	20367404	20379572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
tx.7745	chr16	-	1413	9	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.475578621378	111	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGTGCAGCATACATAA	NA	False	NA	NA	False	NA	NA	NA	20429501	20424221	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
tx.7746	chr16	-	1291	8	NNC	ENSMUSG00000033809.16	novel	1239	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	139.378650313688	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAAGTTAGTGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	20429502	20424207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20429329
tx.7747	chr16	+	992	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	2	140	2	2	multi-exon	FALSE	canonical	3	220	junction_2	23	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTTCTAGGATTTT	5901	False	NA	NA	False	NA	NA	NA	20430344	20437621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_20430571_20436375_20436660_20437139
tx.7748	chr16	+	3121	19	FSM	ENSMUSG00000022842.19	ENSMUST00000003898.12	3152	19	36	-5	13	5	multi-exon	FALSE	canonical	3	19	junction_18	7.37781124490401	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCTTCCTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	20448613	20464670	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
tx.7749	chr16	+	2927	21	FSM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	34	0	-18	0	multi-exon	FALSE	canonical	3	2673	junction_8	225.447882003801	5341	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	NA	False	NA	NA	NA	20470435	20482164	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
tx.775	chr1	-	7151	12	NNC	ENSMUSG00000054387.14	novel	2010	11	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	170.645880492105	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	NA	False	NA	NA	NA	132953089	132913960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132931704_132931845_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
tx.7750	chr16	+	5458	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	839	junction_14	252.911559316567	1101	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	NA	False	NA	NA	NA	20491493	20511633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
tx.7751	chr16	+	5458	33	NIC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	471	junction_14	285.078235903651	579	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	NA	False	NA	NA	NA	20491496	20511633	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
tx.7752	chr16	-	3177	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	-53	4	-6	-4	multi-exon	TRUE	canonical	3	159	junction_10	37.9003269459341	302	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	20534920	20521717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
tx.7753	chr16	-	2155	9	ISM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	6450	6	-541	-6	intron_retention	FALSE	canonical	3	219	junction_5	22.2819293374699	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	20528417	20521719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383
tx.7754	chr16	+	852	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	98	0	-67	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	275	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	1002	False	NA	NA	False	NA	NA	NA	20536512	20541017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
tx.7755	chr16	-	2414	6	FSM	ENSMUSG00000022847.16	ENSMUST00000076422.13	1558	6	9	-865	9	161	multi-exon	FALSE	canonical	3	14	junction_1	5.38887743412299	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGGTGGAAAAGCCAGGA	NA	False	NA	NA	False	NA	NA	NA	20549339	20543042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252
tx.7756	chr16	+	3628	23	FSM	ENSMUSG00000006958.15	ENSMUST00000007171.13	3275	23	-355	2	-355	0	multi-exon	TRUE	canonical	1	3	junction_1	2.73332661424962	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTTTGAGGTAGGCTC	2867	False	NA	NA	False	NA	NA	NA	20551521	20561132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
tx.7757	chr16	+	4192	16	FSM	ENSMUSG00000005958.16	ENSMUST00000006112.7	4185	16	-7	0	-7	0	multi-exon	FALSE	canonical	3	140	junction_8	11.1167541225945	392	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	21023497	21042054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
tx.7758	chr16	+	4916	47	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_1	25.942753613068	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGCCAGTCTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	21241919	21463425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_21241976_21253489_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
tx.7759	chr16	+	4963	47	FSM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	-21	-7	11	-1	multi-exon	FALSE	canonical	3	107	junction_1	17.1577937561462	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCAGTCTCTTGGTTGTC	NA	False	NA	NA	False	NA	NA	NA	21241929	21463429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
tx.776	chr1	+	3755	2	FSM	ENSMUSG00000046062.6	ENSMUST00000122956.2	3688	2	-67	0	-67	0	multi-exon	FALSE	canonical	3	18	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGACTTTATGTAT	5701	False	NA	NA	False	NA	NA	NA	133059014	133067521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_133059649_133064400
tx.7760	chr16	-	5152	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	12	0	12	0	multi-exon	FALSE	canonical	3	80	junction_1	0	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACTGCCGTTGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	21513403	21467794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_21472509_21512965
tx.7761	chr16	-	2982	7	FSM	ENSMUSG00000022853.8	ENSMUST00000023559.7	2981	7	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_3	3.35410196624968	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGTGTAAAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	21606557	21580035	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_21582087_21584975_21585318_21589165_21589271_21592244_21592357_21594094_21594262_21596548_21596653_21606456
tx.7762	chr16	+	593	3	FSM	ENSMUSG00000097290.10	ENSMUST00000209449.2	580	3	-2	-11	-2	-3	multi-exon	FALSE	canonical	3	94	junction_2	32	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGTTGAAAGGTCC	NA	False	NA	NA	False	NA	NA	NA	21613089	21627787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_21613197_21614599_21614726_21627427
tx.7763	chr16	+	3602	5	FSM	ENSMUSG00000097290.10	ENSMUST00000180830.3	3557	5	-50	5	0	0	multi-exon	FALSE	canonical	3	16	junction_4	55.9838146253004	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTAGTTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	21613091	21624875	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_21613197_21614599_21614726_21619464_21619587_21620030_21620107_21621702
tx.7764	chr16	-	1356	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	3	1	3	0	multi-exon	FALSE	canonical	3	143	junction_1	14.1244468918255	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGCAGGTTCTGAATG	9193	False	NA	NA	False	NA	NA	NA	21766299	21753076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
tx.7765	chr16	-	3035	9	ISM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	11281	659	-7629	-659	3prime_fragment	FALSE	canonical	3	141	junction_8	24.9821811497715	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGAAGGAGAAAGGGTTTA	NA	False	NA	NA	False	NA	NA	NA	21803132	21773225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650
tx.7766	chr16	-	3105	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	156	662	6	-662	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACGTGAAGGAGAAAGGGT	NA	False	NA	NA	False	NA	NA	NA	21814257	21773228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
tx.7767	chr16	+	3041	16	FSM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	-162	4	7	-4	multi-exon	FALSE	canonical	3	19	junction_1	119.348341700531	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATTCTGATAATTTTT	2209	False	NA	NA	False	NA	NA	NA	21828240	21866627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
tx.7768	chr16	+	3178	17	FSM	ENSMUSG00000022855.10	ENSMUST00000231724.2	2135	17	-31	-1012	-3	-3	multi-exon	FALSE	canonical	3	37	junction_2	111.888616489793	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTCTGATAATTTTTC	2199	False	NA	NA	False	NA	NA	NA	21828230	21866628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
tx.7769	chr16	+	3095	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	13	1391	13	-3	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	569	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTCTGATAATTTTTC	2215	False	NA	NA	False	NA	NA	NA	21828246	21866628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
tx.777	chr1	+	5458	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	136	0	-65	0	multi-exon	FALSE	canonical	3	372	junction_1	0	378	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGACTTTATGTAT	5703	False	NA	NA	False	NA	NA	NA	133059016	133067521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_133061354_133064400
tx.7770	chr16	-	3659	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	237	3	-43	-3	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	1988	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGGTGTCTTGGTGT	2510	False	NA	NA	False	NA	NA	NA	21981812	21877761	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
tx.7771	chr16	-	2393	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	-2	-704	-2	690	multi-exon	TRUE	canonical	3	442	junction_8	660.884723143114	507	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATTGGCCAAGTAGA	NA	False	NA	NA	False	NA	NA	NA	22084678	22064507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
tx.7772	chr16	-	2074	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	77	1252	-2	647	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	1486	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATATTGTTCTTGCTTCA	NA	False	NA	NA	False	NA	NA	NA	22084678	22064550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
tx.7773	chr16	-	3219	7	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	24706	-6	-9979	-1	3prime_fragment	TRUE	canonical	3	940	junction_4	61.8456860976486	1334	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGCAACCTGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	22230558	22200059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
tx.7774	chr16	-	3872	13	FSM	ENSMUSG00000013089.16	ENSMUST00000079601.13	3975	13	102	1	-1	-1	multi-exon	FALSE	canonical	3	174	junction_9	424.638105724549	317	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGCAACCTGCCTCTT	7588	False	NA	NA	False	NA	NA	NA	22258367	22200059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
tx.7775	chr16	-	3269	8	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	32.3772406836301	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGCCAGAGTTGG	NA	False	NA	NA	False	NA	NA	NA	22676297	22631965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
tx.7776	chr16	-	2674	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	122	7	-3	-1	multi-exon	FALSE	canonical	3	51	junction_7	24.7526539496479	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTTTACTGTGCCAGA	NA	False	NA	NA	False	NA	NA	NA	22676297	22631970	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
tx.7777	chr16	-	2643	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	122	4462	-3	-263	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATGAGTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	22676297	22636425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
tx.7778	chr16	-	2624	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	-11	4456	-9	-263	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATGAGTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	22676428	22636425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
tx.7779	chr16	-	3229	7	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	-1	-265	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	32.7193452800565	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAAATATGAGTCTGA	NA	False	NA	NA	False	NA	NA	NA	22676295	22636427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
tx.7780	chr16	+	1886	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	22	19	1	-19	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	1007	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTGTTTAGAAGGTAC	NA	False	NA	NA	False	NA	NA	NA	22676616	22691119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
tx.7781	chr16	+	6061	9	NIC	ENSMUSG00000004460.18	novel	2513	11	NA	NA	0	-195	intron_retention	FALSE	canonical	3	939	junction_2	60.8161933616368	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCTGTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	22676615	22690861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
tx.7782	chr16	+	1283	6	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	1828	0	-524	0	3prime_fragment	FALSE	canonical	3	93	junction_1	9.66643677887566	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTTCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	22712984	22718193	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_22713186_22713544_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
tx.7783	chr16	-	2803	3	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	1.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAATGTCTGGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	22736809	22729582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr16_-_22731967_22736090_22736195_22736494
tx.7784	chr16	+	1682	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	-183	21	-135	0	multi-exon	TRUE	canonical	0	0	junction_2	163.600059877241	369	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	22736948	22758507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
tx.7785	chr16	+	1583	8	FSM	ENSMUSG00000022871.14	ENSMUST00000023587.12	1544	8	-34	-5	-34	0	multi-exon	FALSE	canonical	0	0	junction_2	202.97702694982	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	22738952	22758507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_22739246_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
tx.7786	chr16	+	1894	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	314	0	0	0	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	981	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	NA	NA	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
tx.7787	chr16	+	4988	3	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	-85	0	intron_retention	FALSE	canonical	3	1869	junction_2	161.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6792	False	NA	NA	False	NA	NA	NA	22927246	22932697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_22930014_22930252_22930343_22930566
tx.7788	chr16	-	1273	12	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	2	35	junction_8	593.762439626105	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTGAATATACAATTTT	NA	False	NA	NA	False	NA	NA	NA	22946466	22932697	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22940979_22941051_22943285_22943365_22946149_22946292_22946434
tx.7789	chr16	-	1219	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	3	6	3	2	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	789	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTGAATATACAATTT	NA	False	NA	NA	False	NA	NA	NA	22946484	22932698	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
tx.779	chr1	+	640	2	FSM	ENSMUSG00000116158.2	ENSMUST00000178033.5	496	2	-143	-1	-143	1	multi-exon	FALSE	canonical	3	48	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGTGTTATTTTTCCC	8711	False	NA	NA	False	NA	NA	NA	133254806	133257461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_133255079_133257093
tx.7790	chr16	+	4340	8	FSM	ENSMUSG00000022885.17	ENSMUST00000023601.14	4506	8	166	0	166	0	multi-exon	FALSE	canonical	2	4	junction_2	3.46410161513775	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGCTTCTCTTTATAC	NA	False	NA	NA	False	NA	NA	NA	23043655	23179098	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_23043980_23075708_23075852_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378
tx.7791	chr16	+	4563	11	FSM	ENSMUSG00000022514.15	ENSMUST00000023156.13	4520	11	-43	0	10	0	multi-exon	FALSE	canonical	1	2	junction_10	6.68505796534331	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTGCATGTGTT	NA	False	NA	NA	False	NA	NA	NA	26400463	26536494	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
tx.7792	chr16	+	1949	8	FSM	ENSMUSG00000022514.15	ENSMUST00000174202.8	2306	8	-44	401	5	-401	multi-exon	FALSE	canonical	3	10	junction_5	3.88087934491604	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTGAGCTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	26400458	26520705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837
tx.7793	chr16	+	6963	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	124	2	13	-2	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGCCTACTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	27207742	27270966	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
tx.7794	chr16	+	3479	12	FSM	ENSMUSG00000038127.16	ENSMUST00000239351.2	1779	12	151	-1851	40	1851	multi-exon	FALSE	canonical	0	0	junction_5	41.9986225669445	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGTCTTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	27207769	27266984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27240442_27240968_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
tx.7795	chr16	-	3544	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	-489	0	-489	0	multi-exon	FALSE	canonical	3	119	junction_1	0	218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGTCATTATTACTT	4308	False	NA	NA	False	NA	NA	NA	28748914	28644927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_28647762_28748204
tx.7796	chr16	+	6013	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-14	-298	combination_of_known_junctions	TRUE	canonical	3	253	junction_5	68.2954691456644	306	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	NA	False	NA	NA	NA	29398181	29473404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
tx.7797	chr16	+	6060	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-7	-298	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	NA	False	NA	NA	NA	29398188	29473404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
tx.7798	chr16	+	5949	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-10	-2709	-8	-299	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTATGATTCTATTATT	NA	False	NA	NA	False	NA	NA	NA	29398187	29473403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
tx.7799	chr16	+	5895	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	37	298	-7	-298	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	NA	False	NA	NA	NA	29398188	29473404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
tx.78	chr1	-	977	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	-4	1041	-4	1	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGTTTTGTTTATTG	NA	False	NA	NA	False	NA	NA	NA	16727112	16712989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
tx.780	chr1	+	3828	7	FSM	ENSMUSG00000070644.14	ENSMUST00000129213.2	2074	7	-1752	-2	4	2	multi-exon	FALSE	canonical	3	61	junction_4	9.46484724300046	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTCTTGGAAGGACAGT	NA	False	NA	NA	False	NA	NA	NA	133291317	133308056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
tx.7800	chr16	-	360	2	ISM	ENSMUSG00000097313.3	ENSMUST00000232297.2	699	4	-40	31287	-39	5569	5prime_fragment	FALSE	canonical	3	93	junction_1	0	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGCGGTGTGGTATTTA	NA	False	NA	NA	False	NA	NA	NA	29765374	29757628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_29757886_29765271
tx.7801	chr16	+	1467	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	1	0	1	0	multi-exon	FALSE	canonical	3	729	junction_2	50.3388517946129	659	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	False	NA	NA	False	NA	NA	NA	29884158	29886614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
tx.7802	chr16	-	5312	2	FSM	ENSMUSG00000052316.10	ENSMUST00000064606.8	5310	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	13	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTTCTCTGTGGAC	NA	False	NA	NA	False	NA	NA	NA	30102076	30088119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_30093341_30101985
tx.7803	chr16	-	7519	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	55.44721219566	218	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	30207653	30131243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
tx.7804	chr16	-	7611	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.8397599844785	152	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	30207655	30131243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
tx.7805	chr16	-	4233	10	FSM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	8	-1836	0	0	multi-exon	FALSE	canonical	3	16	junction_1	4.30618275001691	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTTATTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	30369388	30330672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
tx.7806	chr16	-	4266	11	NIC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.46260011349907	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTTATTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	30369388	30330672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
tx.7807	chr16	-	2295	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	10	875	7	2	multi-exon	FALSE	canonical	2	298	junction_4	64.525303508774	634	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	30406400	30380186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
tx.7808	chr16	-	3460	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	7	3	7	-3	multi-exon	FALSE	canonical	3	135	junction_2	21.3124898175277	360	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTACAGTGTCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	30900243	30773964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
tx.7809	chr16	-	6506	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-88	-3004	-5	0	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTAAGTGCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	31020068	30911229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
tx.781	chr1	+	2263	8	FSM	ENSMUSG00000070644.14	ENSMUST00000135222.9	2297	8	16	18	12	2	multi-exon	FALSE	canonical	3	61	junction_5	9.79379228628721	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTCTTGGAAGGACAGT	NA	False	NA	NA	False	NA	NA	NA	133291325	133308056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_133291757_133293313_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
tx.7810	chr16	-	6507	23	NNC	ENSMUSG00000049076.13	novel	6515	23	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	34.248152510949	28	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTAAGTGCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	31020048	30911229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946117_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
tx.7811	chr16	-	2380	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	15	1683	15	-1683	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	787	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATGTGCTTATTTTGA	NA	False	NA	NA	False	NA	NA	NA	31094080	31072037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
tx.7812	chr16	-	1154	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	-269	73	16	-73	multi-exon	FALSE	canonical	3	993	junction_1	34.2746261832277	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	31094079	31076865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
tx.7813	chr16	-	977	5	FSM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	39	-37	39	3	multi-exon	FALSE	canonical	3	104	junction_4	27.2614654778499	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8749	False	NA	NA	False	NA	NA	NA	31133373	31115936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216
tx.7814	chr16	-	935	6	FSM	ENSMUSG00000022548.15	ENSMUST00000130560.8	2074	6	212	927	-2	3	multi-exon	FALSE	canonical	3	43	junction_5	47.7887015935775	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8708	False	NA	NA	False	NA	NA	NA	31133414	31115936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216_31133287_31133369
tx.7815	chr16	+	3077	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	41	4	-3	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	516	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTCGCAGAGTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	31247606	31277715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
tx.7816	chr16	+	4827	26	FSM	ENSMUSG00000022770.18	ENSMUST00000064477.14	4663	26	-160	-4	-30	1	multi-exon	FALSE	canonical	1	100	junction_1	67.3545841053154	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	31482696	31692168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
tx.7817	chr16	+	4681	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.3319772338318	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	31482697	31692167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
tx.7818	chr16	+	4787	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-35	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.1576052817719	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	31482691	31692168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
tx.7819	chr16	+	4829	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-35	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	71.9072291219735	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	31482691	31692168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
tx.782	chr1	-	4284	13	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-62	0	intron_retention	FALSE	canonical	3	41	junction_7	18.2412459978905	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	133352177	133310040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
tx.7820	chr16	+	4729	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-31	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	67.2157466463196	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	31482695	31692168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
tx.7821	chr16	+	4724	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.0681462806789	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	31482697	31692168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
tx.7822	chr16	+	4778	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	76.3517753559143	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	31482697	31692168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
tx.7823	chr16	+	4633	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	76.7834142789531	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	31482743	31692168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
tx.7824	chr16	+	4062	16	FSM	ENSMUSG00000022780.6	ENSMUST00000023464.6	4133	16	43	28	43	-28	multi-exon	FALSE	canonical	1	2	junction_8	1.29957257930786	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCAGAGGCTTGGATCCT	1768	False	NA	NA	False	NA	NA	NA	31697670	31717810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_31697794_31698940_31699096_31700685_31700786_31702578_31702762_31703761_31703919_31705017_31705086_31706229_31706418_31706927_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
tx.7825	chr16	+	1709	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	74	287	-14	-287	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	238	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGGAGTCTCGCTAGTT	NA	False	NA	NA	False	NA	NA	NA	31767404	31777003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
tx.7826	chr16	-	4676	9	NIC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	20.0234237831596	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTGTTCTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	31821978	31778492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31821809
tx.7827	chr16	-	6217	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	115	0	6	0	multi-exon	FALSE	canonical	3	47	junction_4	8.64670064815276	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTCTGTTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	31821990	31778489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
tx.7828	chr16	-	3816	2	ISM	ENSMUSG00000022772.13	ENSMUST00000144320.2	2804	6	6	9871	6	-9871	5prime_fragment	FALSE	canonical	3	70	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTGTGCAAGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	31821990	31805648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_31809284_31821809
tx.7829	chr16	-	5732	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-1	10	-1	-10	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	499	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTTCTTAAATTTC	NA	False	NA	NA	False	NA	NA	NA	31898161	31835117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
tx.783	chr1	-	3750	14	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-58	2	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	19.4802281798964	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCCCTTTCTCTGCTGG	NA	False	NA	NA	False	NA	NA	NA	133352173	133310038	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
tx.7830	chr16	-	923	5	NIC	ENSMUSG00000023791.19	novel	982	6	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	167.537309277665	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	31918544	31903235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31918287
tx.7831	chr16	-	999	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	0	-6	0	0	multi-exon	FALSE	canonical	3	398	junction_3	17.8258239641258	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	31918556	31903235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
tx.7832	chr16	+	1695	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	14	9	14	5	multi-exon	FALSE	canonical	3	74	junction_3	4.96655480858378	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTCTTACTGGCTTTTC	6506	False	NA	NA	False	NA	NA	NA	31918631	31926878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
tx.7833	chr16	-	2499	3	FSM	ENSMUSG00000052384.15	ENSMUST00000099991.11	2548	3	39	10	11	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAAATGCATCTTGT	NA	False	NA	NA	False	NA	NA	NA	31984364	31961612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_31963824_31966370_31966492_31984197
tx.7834	chr16	-	3348	2	ISM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	8568	0	8568	0	3prime_fragment	FALSE	canonical	3	196	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTAGTCCATGTCA	NA	False	NA	NA	False	NA	NA	NA	32057408	32048929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_32052087_32057217
tx.7835	chr16	-	4175	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	2	2	2	-2	multi-exon	FALSE	canonical	3	188	junction_2	4	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTGGTAGTCCATGT	7825	False	NA	NA	False	NA	NA	NA	32065974	32048931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_32052087_32057217_32057575_32065311
tx.7836	chr16	+	1150	3	FSM	ENSMUSG00000022787.11	ENSMUST00000178573.8	1153	3	12	-9	12	0	multi-exon	FALSE	canonical	3	50	junction_1	36.5	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAATTTTGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	32066056	32075901	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32066086_32070640_32071137_32075276
tx.7837	chr16	+	1386	3	FSM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	4	4	4	-4	multi-exon	FALSE	canonical	3	19	junction_1	52	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGTAATTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	32066074	32075897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32066344_32070640_32071137_32075276
tx.7838	chr16	+	3915	6	FSM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	17	0	17	0	multi-exon	TRUE	canonical	3	5	junction_5	6.9108610172684	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGCTTTTTCCACAT	NA	False	NA	NA	False	NA	NA	NA	32096295	32119724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
tx.7839	chr16	+	3358	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	-31	6986	-31	-1134	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCAAAGTTCTCTCTTT	8221	False	NA	NA	False	NA	NA	NA	32151043	32205579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
tx.784	chr1	-	3765	14	FSM	ENSMUSG00000070643.12	ENSMUST00000153799.8	3693	14	-72	0	-72	0	multi-exon	FALSE	canonical	3	38	junction_8	19.9582404271205	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	133352187	133310040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
tx.7840	chr16	+	800	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	37	1	-7	-1	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATGAATAGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	32238556	32247916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
tx.7841	chr16	+	2360	4	NIC	ENSMUSG00000014075.16	novel	838	5	NA	NA	-19	0	intron_retention	FALSE	canonical	3	251	junction_2	21.6384431561566	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	32238544	32247917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_32238746_32241637_32241772_32244058_32245740_32247573
tx.7842	chr16	+	4792	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-12	9	-9	-9	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTCAATTTCCTGTG	2477	False	NA	NA	False	NA	NA	NA	32249729	32293879	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
tx.7843	chr16	-	1449	9	FSM	ENSMUSG00000035699.9	ENSMUST00000042042.9	2618	9	137	1032	-39	-13	multi-exon	FALSE	canonical	3	30	junction_3	5.50993421013355	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGCTTGCACAAGACACAC	NA	False	NA	NA	False	NA	NA	NA	32306560	32294353	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_32294697_32295190_32295297_32295984_32296132_32296365_32296478_32297122_32297282_32297533_32297608_32298467_32298623_32304952_32305048_32306302
tx.7844	chr16	+	4852	19	NNC	ENSMUSG00000022797.17	novel	3527	5	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.577987911202	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	7840	False	NA	NA	False	NA	NA	NA	32427620	32451608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_32427704_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
tx.7845	chr16	+	4829	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	57	4	-6	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	697	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8014	False	NA	NA	False	NA	NA	NA	32427794	32451608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
tx.7846	chr16	+	3985	2	ISM	ENSMUSG00000022797.17	ENSMUST00000128285.2	3527	5	2887	0	2887	0	3prime_fragment	FALSE	canonical	3	447	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	NA	False	NA	NA	False	NA	NA	NA	32446146	32451608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_32447435_32448911
tx.7847	chr16	+	5218	16	FSM	ENSMUSG00000022791.20	ENSMUST00000115124.9	4516	16	-702	0	5	0	multi-exon	TRUE	canonical	3	42	junction_11	42.4157203561761	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	32462696	32502311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
tx.7848	chr16	+	5169	15	FSM	ENSMUSG00000022791.20	ENSMUST00000115123.9	4226	15	-943	0	9	0	multi-exon	FALSE	canonical	3	77	junction_4	34.8270508281674	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	32462700	32502311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
tx.7849	chr16	+	3928	3	NIC	ENSMUSG00000022791.20	novel	1732	5	NA	NA	-114	0	intron_retention	FALSE	canonical	3	16	junction_1	93	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	356	False	NA	NA	False	NA	NA	NA	32496634	32502311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_32499626_32499969_32500098_32501502
tx.785	chr1	-	4290	13	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-65	0	intron_retention	FALSE	canonical	3	38	junction_7	18.8252194911212	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	133352180	133310040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
tx.7850	chr16	+	2291	4	ISM	ENSMUSG00000022791.20	ENSMUST00000115120.9	2796	7	6396	0	-159	0	3prime_fragment	FALSE	canonical	3	138	junction_1	26.1958436058513	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	2089	False	NA	NA	False	NA	NA	NA	32498367	32502311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_32499626_32499717_32499814_32499969_32500098_32501502
tx.7851	chr16	-	5470	19	FSM	ENSMUSG00000035629.20	ENSMUST00000119810.2	3371	19	55	-2154	55	2	multi-exon	FALSE	canonical	2	4	junction_18	16.139151843335	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGACTGTGGAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	32698081	32642074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32697632
tx.7852	chr16	-	5283	19	FSM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	-4	-22	-4	1	multi-exon	FALSE	canonical	3	55	junction_16	7.31732258934531	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACGACTGTGGAATGGTT	NA	False	NA	NA	False	NA	NA	NA	32688725	32642075	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
tx.7853	chr16	+	3879	8	FSM	ENSMUSG00000022800.15	ENSMUST00000232300.2	2262	8	-14	-1603	4	-828	multi-exon	FALSE	canonical	3	485	junction_4	66.7529713471503	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGATTGAGTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	32698162	32728417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32719310_32721002_32721078_32722788_32722916_32725901
tx.7854	chr16	+	3465	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	22	825	-4	-825	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	841	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTGAGTTGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	32698172	32728420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
tx.7855	chr16	+	5512	21	FSM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	20	4	-2	-4	multi-exon	FALSE	canonical	3	40	junction_20	10.2853050513828	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATGGTTTTCTTGCC	NA	False	NA	NA	False	NA	NA	NA	32734489	32836013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
tx.7856	chr16	-	2492	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6392	1217	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGCTTCTAAATAACC	6112	False	NA	NA	False	NA	NA	NA	32863848	32835772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
tx.7857	chr16	+	479	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	-12	24	-12	0	multi-exon	FALSE	canonical	3	3858	junction_1	2402.68870226669	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	NA	False	NA	NA	NA	32876810	32880535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
tx.7858	chr16	+	481	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	17	12	1	-1	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCACATCTGTC	NA	False	NA	NA	False	NA	NA	NA	32876852	32880534	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
tx.7859	chr16	+	520	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	-20	0	8	0	multi-exon	FALSE	canonical	3	927	junction_1	3609.33805392346	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	NA	False	NA	NA	NA	32876876	32880535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
tx.786	chr1	-	486	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	14	3	14	2	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	565	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGTTTCATTCTGGT	NA	False	NA	NA	False	NA	NA	NA	133538015	133531611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
tx.7860	chr16	+	1043	4	FSM	ENSMUSG00000060636.15	ENSMUST00000115075.2	518	4	-516	-9	3	0	multi-exon	FALSE	canonical	3	8092	junction_3	1051.6733755729	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	NA	False	NA	NA	NA	32876871	32880535	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32877549_32877759_32877913_32879048_32879194_32880467
tx.7861	chr16	+	6148	17	FSM	ENSMUSG00000022802.3	ENSMUST00000023497.3	6147	17	-1	0	-1	0	multi-exon	FALSE	canonical	2	5	junction_12	4.16645832812474	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTAGCTTGTCTTTACCT	4778	False	NA	NA	False	NA	NA	NA	32882889	32948065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927383_32927544_32930147_32930279_32937370_32937582_32943891
tx.7862	chr16	+	6165	17	FSM	ENSMUSG00000022802.3	ENSMUST00000023497.3	6147	17	-18	0	-18	0	multi-exon	FALSE	canonical	2	5	junction_12	4.16645832812474	14	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTAGCTTGTCTTTACCT	4761	False	NA	NA	False	NA	NA	NA	32882872	32948065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927383_32927544_32930147_32930279_32937370_32937582_32943891
tx.7863	chr16	+	4521	13	FSM	ENSMUSG00000022807.10	ENSMUST00000039733.10	4521	13	-1	1	-1	-1	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	292	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGGCGTCTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	33005439	33063681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
tx.7864	chr16	+	2469	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-15	707	-13	-3	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	516	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTTGTATTATTTTAA	9268	False	NA	NA	False	NA	NA	NA	33071798	33119932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
tx.7865	chr16	+	7441	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-14	2403	-14	-2403	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTACTTGTCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	33201191	33322330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
tx.7866	chr16	+	4108	9	NNC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-21	81	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	46.8368177825949	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATACACACTT	NA	False	NA	NA	False	NA	NA	NA	33201478	33319094	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_33201588_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
tx.7867	chr16	+	2497	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	17.7080882335979	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATTTTTTATTATTT	NA	False	NA	NA	False	NA	NA	NA	33337710	33483779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
tx.7868	chr16	+	2609	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	46	1	46	1	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	33337743	33483777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
tx.7869	chr16	+	3220	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	41	-8	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	14.3611648397877	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCATGACCAGGCTTG	NA	False	NA	NA	False	NA	NA	NA	33337738	33484497	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
tx.787	chr1	-	7451	16	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	4089	-72	4089	72	intron_retention	FALSE	canonical	3	293	junction_13	50.7709453219938	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	NA	False	NA	NA	NA	133584967	133547605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
tx.7870	chr16	+	2491	13	FSM	ENSMUSG00000035506.17	ENSMUST00000059056.15	3166	13	-52	727	-1	0	multi-exon	FALSE	canonical	3	33	junction_4	11.0754984838908	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	33338646	33483778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
tx.7871	chr16	+	8866	17	FSM	ENSMUSG00000075254.13	ENSMUST00000232568.2	4187	17	56	-4735	-40	-28	multi-exon	FALSE	canonical	2	4	junction_13	3.21130814466628	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGGCTTTCTCTTACAA	6879	False	NA	NA	False	NA	NA	NA	33504795	33591918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_33505226_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
tx.7872	chr16	+	3092	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	-2	192	-2	1	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	428	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTAGATCTGATTACTG	NA	False	NA	NA	False	NA	NA	NA	33650032	33769516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
tx.7873	chr16	-	3023	4	ISM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	4855	-10	4855	-2	3prime_fragment	FALSE	canonical	3	1087	junction_1	69.1391511534689	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTAGTCTCCTGCCT	4653	False	NA	NA	False	NA	NA	NA	33782518	33775153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938
tx.7874	chr16	-	3437	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	35	12	0	0	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	1209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAACATCCTCTGTAG	8675	False	NA	NA	False	NA	NA	NA	33787373	33775163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
tx.7875	chr16	-	3293	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	-1	-9	-1	-3	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTAGTCTCCTGCC	8674	False	NA	NA	False	NA	NA	NA	33787374	33775154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
tx.7876	chr16	-	2716	16	NNC	ENSMUSG00000061751.17	novel	2690	16	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	6.90700127889569	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCAAAGGTTAGTT	NA	False	NA	NA	False	NA	NA	NA	33916417	33833505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33916165
tx.7877	chr16	-	2692	16	FSM	ENSMUSG00000061751.17	ENSMUST00000232157.2	2690	16	8	-10	8	1	multi-exon	FALSE	canonical	3	12	junction_2	6.74157910944379	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCAAAGGTTAGTT	NA	False	NA	NA	False	NA	NA	NA	33916390	33833505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33916165
tx.7878	chr16	+	4013	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	-22	8	0	0	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	288	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGAATTTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	34511079	34545564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
tx.7879	chr16	+	3189	10	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	45.3352396113364	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGAATTTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	34511080	34545566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
tx.788	chr1	-	4427	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	3	78	junction_17	104.361959952471	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	NA	False	NA	NA	NA	133589112	133547605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
tx.7880	chr16	+	994	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	2	-2599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	604	3	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTACATAAAGCATCC	NA	False	NA	NA	False	NA	NA	NA	34842801	34926948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_34843006_34846194_34846313_34895957_34896065_34920125_34920248_34922315_34922495_34926684
tx.7881	chr16	+	5667	21	FSM	ENSMUSG00000022840.10	ENSMUST00000114913.3	7008	21	-3	1344	-3	-1344	multi-exon	FALSE	canonical	1	2	junction_2	1.74570902500961	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTAGACTATGCTAGTT	NA	False	NA	NA	False	NA	NA	NA	34975243	35124764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_34977606_35069170_35069321_35073510_35073633_35087549_35087662_35089325_35089454_35091207_35091367_35092448_35092591_35094794_35094936_35098864_35098888_35099565_35099711_35100708_35100807_35103891_35103980_35109874_35109992_35110396_35110562_35111871_35112048_35113387_35113418_35114331_35114465_35118716_35118981_35119822_35120028_35122636_35122762_35123982
tx.7882	chr16	-	1674	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	41	2277	-25	656	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTTCCAAATTCTTA	NA	False	NA	NA	False	NA	NA	NA	35184247	35133777	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
tx.7883	chr16	-	1820	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	-8	-3	-8	3	multi-exon	FALSE	canonical	3	428	junction_7	56.9566378374812	547	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTAGAGTATGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	35311251	35217678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
tx.7884	chr16	+	4759	22	FSM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	-413	4	13	-4	multi-exon	FALSE	canonical	3	22	junction_14	8.19767125828774	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGTCTTTGTGCATAT	NA	False	NA	NA	False	NA	NA	NA	35361527	35484627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
tx.7885	chr16	-	2514	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-12	2893	-12	593	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGATTTTTGCCAATACC	NA	False	NA	NA	False	NA	NA	NA	35589738	35517324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
tx.7886	chr16	+	1692	9	FSM	ENSMUSG00000022849.6	ENSMUST00000023555.6	4680	9	-33	3021	-1	-92	multi-exon	TRUE	canonical	3	10	junction_4	251.189669373563	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTGTATATTTGCTTTTT	5403	False	NA	NA	False	NA	NA	NA	35590743	35645826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35634699_35634780_35637521_35637694_35639048_35639133_35645058_35645170_35645252
tx.7887	chr16	+	1593	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	16	94	16	-94	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	491	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGTGTATATTTGCTTT	5420	False	NA	NA	False	NA	NA	NA	35590760	35645824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
tx.7888	chr16	-	7493	17	FSM	ENSMUSG00000034422.15	ENSMUST00000042665.9	7417	17	-80	4	-80	-4	multi-exon	FALSE	canonical	1	2	junction_15	4.31883592533914	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTCTCTTGGTGGAAT	NA	False	NA	NA	False	NA	NA	NA	35691994	35653247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_35655306_35656360_35656536_35659631_35659766_35661091_35661692_35661778_35662001_35664613_35664782_35665097_35665161_35665639_35665790_35666379_35666456_35673101_35673324_35673888_35674129_35676852_35679135_35680799_35681037_35683729_35683964_35685488_35685523_35686518_35686659_35691536
tx.7889	chr16	-	5294	5	FSM	ENSMUSG00000049502.18	ENSMUST00000081933.14	5309	5	11	4	11	-4	multi-exon	FALSE	canonical	3	12	junction_3	7.25861557047899	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTGTGTGGTTTCCCTC	10005	False	NA	NA	False	NA	NA	NA	35759510	35746884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_35749739_35751742_35751961_35752645_35754170_35756746_35756998_35759063
tx.789	chr1	-	4392	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	6	-3	6	3	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	NA	False	NA	NA	NA	133589112	133547605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
tx.7890	chr16	+	3534	11	FSM	ENSMUSG00000022906.16	ENSMUST00000114878.8	3548	11	14	0	14	0	multi-exon	FALSE	canonical	3	21	junction_5	7.49399759807808	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTGAATCGTGAATG	NA	False	NA	NA	False	NA	NA	NA	35758853	35792975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_35759431_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
tx.7891	chr16	+	5030	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	10	-1	0	1	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	911	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGGTTTTCCTTGGGT	NA	False	NA	NA	False	NA	NA	NA	35803694	35857502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
tx.7892	chr16	+	5132	14	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	-2	-22	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	124.529647618929	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAACGTGGGGCTGTAT	NA	False	NA	NA	False	NA	NA	NA	35803721	35857479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_35804031_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
tx.7893	chr16	+	5138	15	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	-10	5	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	163.253402627289	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTCCTTGGGTTATG	NA	False	NA	NA	False	NA	NA	NA	35803713	35857506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
tx.7894	chr16	-	693	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-60	85	19	0	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	240	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTCTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	35891945	35864215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
tx.7895	chr16	+	970	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	94	9	94	0	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	NA	False	NA	NA	NA	35892148	35912481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
tx.7896	chr16	+	4751	2	ISM	ENSMUSG00000075229.12	ENSMUST00000099937.6	740	5	4216	-3	-3713	3	3prime_fragment	FALSE	canonical	3	907	junction_1	0	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACATATTTATTTGGT	NA	False	NA	NA	False	NA	NA	NA	35905860	35912484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_35910331_35912203
tx.7897	chr16	-	4292	7	NNC	ENSMUSG00000051980.14	novel	4534	7	NA	NA	29665	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3.90156663690654	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCAGTATTATTGAGTT	7200	False	NA	NA	False	NA	NA	NA	36352303	36314050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_36316337_36317951_36318076_36320538_36320770_36329955_36330841_36335815_36336123_36337963_36338391_36352271
tx.7898	chr16	+	2980	8	FSM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	0	62	0	1	multi-exon	FALSE	canonical	3	17	junction_1	99.4786409235671	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTCCTGTGTTTGGCA	NA	False	NA	NA	False	NA	NA	NA	36514339	36547104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
tx.7899	chr16	+	2721	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7299	-13	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	91.299263718584	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTGGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	36528600	36547090	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
tx.79	chr1	+	1636	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	-3	77	0	3	multi-exon	FALSE	canonical	3	512	junction_1	10.5	390	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTATGTGTTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	16735430	16748422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_16735730_16737891_16737998_16747191
tx.790	chr1	-	4446	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-56	6	4	-6	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	NA	False	NA	NA	NA	133589112	133547605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
tx.7900	chr16	+	2719	7	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14192	2	-7308	-2	3prime_fragment	FALSE	canonical	0	0	junction_6	113.338235188111	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAAATTCCTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	36528591	36547101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
tx.7901	chr16	+	2756	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14256	65	-7304	-2	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAAATTCCTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	36528595	36547101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
tx.7902	chr16	+	2304	6	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	15347	484	-6213	-421	3prime_fragment	FALSE	canonical	3	275	junction_3	16.2061716639063	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACTTCTATTCATT	NA	False	NA	NA	False	NA	NA	NA	36529686	36546682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
tx.7903	chr16	+	1613	13	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	67.3747294366862	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAAGTCTGAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	36648759	36679933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
tx.7904	chr16	+	1665	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAAGTCTGAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	36648760	36679933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
tx.7905	chr16	+	2223	15	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	69.4050518657669	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATGTTATTTCAATG	NA	False	NA	NA	False	NA	NA	NA	36648756	36693081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
tx.7906	chr16	+	2423	12	ISM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	-9	13142	-8	-1	5prime_fragment	FALSE	canonical	3	199	junction_1	25.9274257294988	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAAGTCTGAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	36648760	36679933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816
tx.7907	chr16	+	2275	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	-12	-6	-11	-2	multi-exon	FALSE	canonical	3	136	junction_14	52.2779073016196	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATGTTATTTCAATG	NA	False	NA	NA	False	NA	NA	NA	36648757	36693081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
tx.7908	chr16	+	7157	10	ISM	ENSMUSG00000034243.18	ENSMUST00000039855.9	10847	21	27820	4	-10503	-4	3prime_fragment	FALSE	canonical	3	70	junction_5	8.64098759787715	61	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGTGTGAGACTATCT	NA	False	NA	NA	False	NA	NA	NA	36734315	36753443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
tx.7909	chr16	+	3612	9	ISM	ENSMUSG00000034243.18	ENSMUST00000039855.9	10847	21	32274	3	-6049	-3	3prime_fragment	FALSE	canonical	3	70	junction_4	9.13441295322255	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTGTGAGACTATCTG	NA	False	NA	NA	False	NA	NA	NA	36738769	36753444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
tx.791	chr1	-	5758	17	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4	-6	intron_retention	FALSE	canonical	3	133	junction_16	79.3516697996961	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	NA	False	NA	NA	NA	133589112	133547605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
tx.7910	chr16	+	5215	15	ISM	ENSMUSG00000034206.16	ENSMUST00000054034.7	8552	30	48913	0	20263	0	3prime_fragment	FALSE	canonical	3	21	junction_1	3.53986048381825	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	995	False	NA	NA	False	NA	NA	NA	36881060	36915779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
tx.7911	chr16	+	4856	6	FSM	ENSMUSG00000034206.16	ENSMUST00000182717.2	2202	6	-2654	0	-2654	0	multi-exon	FALSE	canonical	3	27	junction_2	2.75680975041804	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	36903622	36915779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
tx.7912	chr16	-	3077	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	2	5	2	-5	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	508	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGAGGTGGTTATACTC	NA	False	NA	NA	False	NA	NA	NA	37360149	37330156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
tx.7913	chr16	+	2017	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	13	1	-2	-1	multi-exon	FALSE	canonical	3	98	junction_4	11.0896163971859	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGTCATTTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	37360259	37392746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
tx.7914	chr16	-	461	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	78	432	-9	-1	multi-exon	FALSE	canonical	3	6062	junction_1	348	582	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTCTTTTTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	37474737	37467963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_37468082_37469375_37469523_37474541
tx.7915	chr16	+	3644	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	151	-6	-31	6	multi-exon	FALSE	canonical	3	116	junction_9	10.1607086367044	266	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTTGGTTTCCTTATT	5302	False	NA	NA	False	NA	NA	NA	37597385	37656882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
tx.7916	chr16	+	8621	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-19	2	-19	-2	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTCTTGGTCCGGTC	NA	False	NA	NA	False	NA	NA	NA	37688731	37709218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
tx.7917	chr16	+	2649	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	347	5307	347	-2	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCACTTTTCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	37909709	38061139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
tx.7918	chr16	+	416	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	19	9	-12	-9	multi-exon	FALSE	canonical	3	2901	junction_2	455	473	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAACCGTCTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	38167371	38173116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_38167570_38169602_38169692_38172987
tx.7919	chr16	-	917	5	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	25420	0	10069	0	3prime_fragment	FALSE	canonical	3	158	junction_2	28.8823042709546	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	38228087	38216478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953
tx.792	chr1	-	5739	17	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4	-6	intron_retention	FALSE	canonical	3	78	junction_16	90.1805264109165	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	NA	False	NA	NA	NA	133589112	133547605	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588993
tx.7920	chr16	-	3590	3	ISM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	50	1371	29	-1371	intron_retention	FALSE	canonical	3	1151	junction_2	92.5	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGACTTTTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	38273015	38265762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_38266467_38267609_38267971_38270490
tx.7921	chr16	-	1120	2	ISM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	5039	1372	5018	-1372	3prime_fragment	FALSE	canonical	3	1336	junction_1	0	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	38268026	38265763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_38266467_38267609
tx.7922	chr16	-	1557	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	35	1374	14	-1374	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	1025	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTCTGACTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	38273030	38265765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
tx.7923	chr16	+	3111	6	ISM	ENSMUSG00000075122.6	ENSMUST00000231716.2	3173	7	3322	4	-50	-4	3prime_fragment	FALSE	canonical	1	1	junction_3	0.8	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATTTGCTAATTTGTC	NA	False	NA	NA	False	NA	NA	NA	38279244	38316693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_38279652_38294227_38294546_38299425_38299708_38302981_38303096_38306665_38306810_38314847
tx.7924	chr16	-	2333	16	Fusion	ENSMUSG00000002846.10_ENSMUSG00000034064.15	novel	1573	7	NA	NA	10	16	multi-exon	FALSE	canonical	3	59	junction_6	371.529176362892	52	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAATCATGCCTCAGTCT	6276	False	NA	NA	False	NA	NA	NA	38370574	38318692	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
tx.7925	chr16	-	2974	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	14	-66	14	63	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTTTGTAAGAGTTG	6280	False	NA	NA	False	NA	NA	NA	38370570	38345435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
tx.7926	chr16	-	2779	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	42	-63	6	63	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	852	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTTTGTAAGAGTTG	6272	False	NA	NA	False	NA	NA	NA	38370578	38345435	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
tx.7927	chr16	-	3418	10	ISM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	15	-65	15	62	intron_retention	FALSE	canonical	3	921	junction_4	40.8985495833861	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGTTTTGTAAGAGTT	6281	False	NA	NA	False	NA	NA	NA	38370569	38345436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
tx.7928	chr16	+	1869	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-30	-194	-30	38	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	427	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7040	False	NA	NA	False	NA	NA	NA	38379029	38411746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
tx.7929	chr16	+	2089	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	4	778	4	38	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	NA	False	NA	NA	NA	38383177	38411746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
tx.793	chr1	-	7843	20	FSM	ENSMUSG00000026463.18	ENSMUST00000165602.9	8101	20	251	7	185	-7	multi-exon	FALSE	canonical	3	10	junction_19	4.16554924998092	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGCTATCGTCTGGGT	8873	False	NA	NA	False	NA	NA	NA	133681234	133630418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
tx.7930	chr16	+	1858	9	FSM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	35	774	-14	42	multi-exon	FALSE	canonical	1	87	junction_5	275.38779475496	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGGAGTGACATTCA	NA	False	NA	NA	False	NA	NA	NA	38383208	38411750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
tx.7931	chr16	+	2113	7	FSM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	-6	197	-6	4	multi-exon	TRUE	canonical	3	15	junction_1	6.0184900284226	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTTGTTTTTTTACT	3906	False	NA	NA	False	NA	NA	NA	38562619	38589214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
tx.7932	chr16	+	2044	7	FSM	ENSMUSG00000022793.18	ENSMUST00000154902.2	2009	7	-34	-1	-2	1	multi-exon	FALSE	canonical	2	4	junction_5	9.26312882106017	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGTCTTGTTTTTTT	3910	False	NA	NA	False	NA	NA	NA	38562623	38589211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583492_38586276_38586382_38588259
tx.7933	chr16	-	1395	3	FSM	ENSMUSG00000047261.10	ENSMUST00000102817.5	1420	3	25	0	25	0	multi-exon	FALSE	canonical	2	3	junction_1	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTGTCTCTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	42160989	42068804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_42069478_42112161_42112730_42160835
tx.7934	chr16	-	3063	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	44.3163344603319	71	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43710035	43681769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
tx.7935	chr16	-	3033	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	35.9374456521328	132	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43710030	43681769	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
tx.7936	chr16	+	3033	16	FSM	ENSMUSG00000022701.19	ENSMUST00000178400.9	3745	16	93	619	-6	-619	multi-exon	FALSE	canonical	1	27	junction_10	16.0949957716331	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGCCTGGACTTA	NA	False	NA	NA	False	NA	NA	NA	43710255	43784058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
tx.7937	chr16	+	4339	8	FSM	ENSMUSG00000022701.19	ENSMUST00000122014.8	1822	8	5	-2522	5	-1461	multi-exon	FALSE	canonical	3	61	junction_7	9.64682458064808	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATGTCAGAGTTCAC	NA	False	NA	NA	False	NA	NA	NA	43710266	43762452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276
tx.7938	chr16	-	5589	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	10.9544511501033	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	43800182	43785395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799821
tx.7939	chr16	-	5159	3	ISM	ENSMUSG00000036304.15	ENSMUST00000231700.2	5751	5	5714	0	4973	0	3prime_fragment	FALSE	canonical	3	34	junction_2	10.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	43794440	43785395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_43789777_43791761_43791930_43793830
tx.794	chr1	-	2582	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	2	159	2	-159	multi-exon	FALSE	canonical	3	77	junction_1	0	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGTAGAGAAGGTGGAA	NA	False	NA	NA	False	NA	NA	NA	134006856	134003066	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_134005442_134006649
tx.7940	chr16	-	5848	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	11.6054943884352	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	43800152	43785395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799821
tx.7941	chr16	-	5404	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.4995237987254	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	43800158	43785395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799982
tx.7942	chr16	-	5677	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	10.9857862713599	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	43800146	43785399	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799982
tx.7943	chr16	-	2101	3	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-7	-5108	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTCTGCTGCTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	43800161	43794616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_43796109_43799270_43799540_43799821
tx.7944	chr16	-	3803	18	FSM	ENSMUSG00000036292.15	ENSMUST00000214098.2	2046	18	-67	-1690	-67	-3	multi-exon	FALSE	canonical	0	0	junction_16	2.1994022465694	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTGTCGTTTTTTCTTC	5902	False	NA	NA	False	NA	NA	NA	43883775	43800720	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_43802502_43803503_43803610_43803870_43803982_43807284_43807343_43808443_43808621_43810130_43810235_43810985_43811129_43812421_43812541_43818088_43818227_43825822_43825986_43829767_43829901_43833284_43833401_43849041_43849123_43850656_43850753_43851342_43851447_43860436_43860522_43879464_43879612_43883634
tx.7945	chr16	-	3770	13	ISM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	24587	0	24262	0	3prime_fragment	FALSE	canonical	3	410	junction_3	31.1647726697237	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	43935081	43905764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976
tx.7946	chr16	-	3971	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	168	-243	-10	0	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	43959391	43905764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
tx.7947	chr16	-	3978	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	256	0	-31	0	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	605	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	43959412	43905764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
tx.7948	chr16	+	3778	6	FSM	ENSMUSG00000022698.18	ENSMUST00000159514.8	3756	6	-22	0	-22	0	multi-exon	FALSE	canonical	2	5	junction_1	773.749675282646	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATCTGTCTGTAACTGT	NA	False	NA	NA	False	NA	NA	NA	43960170	43982837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_43960475_43965143_43965282_43976772_43976910_43977436_43977557_43978242_43978310_43979825
tx.7949	chr16	+	3625	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-29	891	-6	1	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1488	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTGTAACTGTC	NA	False	NA	NA	False	NA	NA	NA	43960186	43982838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
tx.795	chr1	-	4468	28	NNC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-11795	6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_26	16.5805180934407	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	NA	False	NA	NA	NA	134272461	134226112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260667_134272330
tx.7950	chr16	+	3635	5	FSM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	-75	-3	-19	1	multi-exon	FALSE	canonical	3	375	junction_1	525.255652040033	639	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTGTAACTGTC	NA	False	NA	NA	False	NA	NA	NA	43960173	43982838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825
tx.7951	chr16	+	8027	6	NIC	ENSMUSG00000068284.15	novel	12708	7	NA	NA	-14	-4575	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	24.5063257139866	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAATAAGAAAATGAATT	NA	False	NA	NA	False	NA	NA	NA	43993594	44043251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_43993874_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
tx.7952	chr16	+	938	7	NNC	ENSMUSG00000068284.15	novel	757	7	NA	NA	-13	3	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	23.1276650116022	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTTGATTACTTCT	NA	False	NA	NA	False	NA	NA	NA	43993595	44033298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_43993874_44018602_44018672_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002
tx.7953	chr16	+	8120	7	FSM	ENSMUSG00000068284.15	ENSMUST00000119746.8	12708	7	-10	4598	-10	-4596	multi-exon	FALSE	canonical	3	10	junction_6	17.7709188157381	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGTCCTTCATAACA	NA	False	NA	NA	False	NA	NA	NA	43993598	44043230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
tx.7954	chr16	+	3011	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	15	94	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.2833029498811	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6416	False	NA	NA	False	NA	NA	NA	44167791	44207600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_44167870_44175802_44175899_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
tx.7955	chr16	+	3072	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	295	1260	2	94	multi-exon	FALSE	canonical	0	0	junction_1	35.5942143737688	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6403	False	NA	NA	False	NA	NA	NA	44167778	44207600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
tx.7956	chr16	+	3300	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-8	94	intron_retention	FALSE	canonical	0	0	junction_1	36.6614046887186	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6393	False	NA	NA	False	NA	NA	NA	44167768	44207600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
tx.7957	chr16	+	2935	16	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-5	94	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.8355505958204	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6396	False	NA	NA	False	NA	NA	NA	44167771	44207600	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_44167870_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
tx.7958	chr16	-	4450	19	FSM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	6	-5	6	5	multi-exon	FALSE	canonical	2	4	junction_3	3.24132269906996	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGAGTGAGTCAGCGTT	NA	False	NA	NA	False	NA	NA	NA	44379254	44305406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
tx.7959	chr16	+	5397	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	-17	-2514	-17	2514	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTTTTTATCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	44544646	44560161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
tx.796	chr1	-	4711	21	ISM	ENSMUSG00000026458.14	ENSMUST00000186730.7	4674	22	250	8	250	-3	3prime_fragment	FALSE	canonical	2	30	junction_19	10.0641691162261	34	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATGTACAAATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	134254754	134224529	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
tx.7960	chr16	+	5864	9	NNC	ENSMUSG00000036208.14	novel	3743	6	NA	NA	228	2501	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	17.4982141945971	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTACAGT	NA	False	NA	NA	False	NA	NA	NA	44544947	44560148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_44545613_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
tx.7961	chr16	+	3132	8	ISM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	2136	157	270	-157	3prime_fragment	FALSE	canonical	3	45	junction_5	6.67312612235809	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACCATTATCTAATCTT	NA	False	NA	NA	False	NA	NA	NA	44546799	44557490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
tx.7962	chr16	-	3399	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	16	0	12	0	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	44566710	44557130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
tx.7963	chr16	-	2958	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	37	1238	-14	1135	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTGTACTATGTC	NA	False	NA	NA	False	NA	NA	NA	44979032	44961173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
tx.7964	chr16	+	1463	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	-21	615	-21	29	multi-exon	FALSE	canonical	3	353	junction_3	33.1011472673263	259	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATGTTTTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	44979126	45008286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
tx.7965	chr16	-	2231	5	NIC	ENSMUSG00000022661.15	novel	2347	6	NA	NA	1	13	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	11.6270159542335	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTCTATGCGAAATC	NA	False	NA	NA	False	NA	NA	NA	45229369	45202484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45229218
tx.7966	chr16	-	2318	6	FSM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	37	-8	1	8	multi-exon	FALSE	canonical	3	12	junction_1	7.98498591107085	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTCTATGCG	NA	False	NA	NA	False	NA	NA	NA	45229379	45202489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45220584_45220667_45229218
tx.7967	chr16	-	1061	4	FSM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	179	0	179	0	multi-exon	FALSE	canonical	3	70	junction_1	1.63299316185545	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAGTATAACTTTATT	NA	False	NA	NA	False	NA	NA	NA	45544792	45531592	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_45532073_45533294_45533398_45543285_45543461_45544489
tx.7968	chr16	-	2625	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGAGTCCTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	45563276	45550084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
tx.7969	chr16	-	2808	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	38	2	-10	-2	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATGGTGAGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	45563280	45550089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
tx.797	chr1	-	5478	25	NIC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-1834	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_22	14.4076922934321	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGGTGTCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	134256838	134224522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381
tx.7970	chr16	-	2850	6	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-14	-6	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	144.088028649156	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTGTATGGTGAGTC	NA	False	NA	NA	False	NA	NA	NA	45563284	45550093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45560681_45560866_45563139
tx.7971	chr16	-	5469	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	16	-2	16	2	multi-exon	FALSE	canonical	3	48	junction_15	7.72315083521806	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTGGAAACACTTTCTC	NA	False	NA	NA	False	NA	NA	NA	45664725	45566603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
tx.7972	chr16	-	4126	16	ISM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	38	4647	3	-3730	5prime_fragment	FALSE	canonical	3	48	junction_13	8.2138095100061	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAGTTTTGTATTAAA	NA	False	NA	NA	False	NA	NA	NA	45664703	45571252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
tx.7973	chr16	-	1749	7	FSM	ENSMUSG00000022656.16	ENSMUST00000096052.9	1746	7	-160	157	-45	-157	multi-exon	FALSE	canonical	3	13	junction_2	112.29784305834	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTTGTGTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	46317375	46256498	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_46256802_46258292_46258432_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
tx.7974	chr16	-	3114	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-45	-7	-45	7	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	400	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGGGGTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	46317375	46267524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
tx.7975	chr16	-	2691	5	ISM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	32833	-7	-15624	7	3prime_fragment	FALSE	canonical	3	205	junction_1	21.2779228309532	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGGGGTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	46284497	46267524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180
tx.7976	chr16	+	1470	7	FSM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	10	-1	10	1	multi-exon	FALSE	canonical	3	369	junction_4	76.5188792971309	299	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	48104107	48114601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
tx.7977	chr16	+	1763	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	-3	188	-3	-188	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGACAGGGTCTTTTGC	NA	False	NA	NA	False	NA	NA	NA	48130836	48139898	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
tx.7978	chr16	+	3014	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	41	-10	41	10	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCCTTTTGATTGCTA	NA	False	NA	NA	False	NA	NA	NA	48251640	48451273	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
tx.7979	chr16	+	3446	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	46	637	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	346.731012546799	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTGCCTCCTGTGACA	NA	False	NA	NA	False	NA	NA	NA	48251645	48451900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451758
tx.798	chr1	-	3055	7	ISM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	232	0	-57	0	3prime_fragment	FALSE	canonical	0	0	junction_2	219.093397131604	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289485	134273834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271
tx.7980	chr16	+	3337	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	39	623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	351.484057816864	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTTTGATGTATAATG	NA	False	NA	NA	False	NA	NA	NA	48251638	48451886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451758
tx.7981	chr16	+	3528	19	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17344	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	404.178041077059	32	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTTTTGATTGCTAT	6865	False	NA	NA	False	NA	NA	NA	48317338	48451274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
tx.7982	chr16	-	718	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	705	junction_1	0	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCACTTTGGCTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	48422128	48420466	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr16_-_48421063_48422006
tx.7983	chr16	+	2661	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16999	1945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	472.316746871207	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAAGGCCCGTCTGC	694	False	NA	NA	False	NA	NA	NA	48432028	48453208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451758
tx.7984	chr16	+	2740	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17032	1947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	424.555061211146	102	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAAGGCCCGTCTGCTG	727	False	NA	NA	False	NA	NA	NA	48432061	48453210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451758
tx.7985	chr16	-	5599	32	FSM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	221	0	-3	0	multi-exon	FALSE	canonical	3	63	junction_19	19.7691147506127	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4418	False	NA	NA	False	NA	NA	NA	48814307	48744594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
tx.7986	chr16	-	6840	32	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	21.2442316342938	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	NA	False	NA	NA	NA	48814305	48744594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
tx.7987	chr16	-	5118	31	FSM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	-140	-1647	84	0	multi-exon	FALSE	canonical	3	44	junction_18	21.5464614264152	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4281	False	NA	NA	False	NA	NA	NA	48814444	48744594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
tx.7988	chr16	-	6327	31	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	22.9540846038347	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4315	False	NA	NA	False	NA	NA	NA	48814410	48744594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
tx.7989	chr16	+	3973	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	0	1	0	-1	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	293	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACATTTTAGATCAGTA	NA	False	NA	NA	False	NA	NA	NA	48814550	48840067	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
tx.799	chr1	-	4002	8	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	298.896064114028	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289689	134273834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134283455_134288494_134288663_134289271_134289362_134289499
tx.7990	chr16	+	1611	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	-19	1009	-19	0	multi-exon	FALSE	canonical	3	141	junction_7	10.0915806492343	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTCAGAGAAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	49519576	49584480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
tx.7991	chr16	+	1875	5	ISM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	-9	52112	-9	1147	5prime_fragment	FALSE	canonical	3	148	junction_2	8.03118920210451	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTATTTTTAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	49519586	49533377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201
tx.7992	chr16	+	1979	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229206.2	1316	11	16	-679	5	669	multi-exon	FALSE	canonical	3	21	junction_9	24.8766959220874	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	49676023	49732123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
tx.7993	chr16	+	1927	9	NIC	ENSMUSG00000055447.20	novel	5250	10	NA	NA	-1	669	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	11.8532695911297	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	49676017	49732123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
tx.7994	chr16	-	8735	17	FSM	ENSMUSG00000022641.16	ENSMUST00000138166.8	8743	17	1	7	0	-7	multi-exon	FALSE	canonical	1	5	junction_15	4.24079886342184	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATATTATTCAAATACA	9715	False	NA	NA	False	NA	NA	NA	50252752	50012213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
tx.7995	chr16	+	6520	20	NIC	ENSMUSG00000022637.12	novel	3864	19	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	15.1180030632521	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTTTGTATGTTATT	NA	False	NA	NA	False	NA	NA	NA	51851926	52028408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
tx.7996	chr16	+	6302	18	FSM	ENSMUSG00000022637.12	ENSMUST00000114471.3	6648	18	340	6	2	-6	multi-exon	FALSE	canonical	3	25	junction_15	12.7088776425873	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTTTTGTATGTT	NA	False	NA	NA	False	NA	NA	NA	51851927	52028405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
tx.7997	chr16	+	6441	19	FSM	ENSMUSG00000022637.12	ENSMUST00000226593.2	3864	19	-46	-2531	-3	-4	multi-exon	TRUE	canonical	3	31	junction_16	12.3923761908006	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTTTTGTATGTTAT	NA	False	NA	NA	False	NA	NA	NA	51851922	52028407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
tx.7998	chr16	+	6385	19	FSM	ENSMUSG00000022637.12	ENSMUST00000227062.2	3728	19	3	-2660	3	-4	multi-exon	FALSE	canonical	3	23	junction_2	15.6067609597354	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTTTTGTATGTTAT	NA	False	NA	NA	False	NA	NA	NA	51851928	52028407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
tx.7999	chr16	-	3628	12	FSM	ENSMUSG00000035356.18	ENSMUST00000114458.8	3627	12	-1	0	-1	0	multi-exon	FALSE	canonical	1	2	junction_4	2.64418901313618	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCTTTTCTAGTGCC	NA	False	NA	NA	False	NA	NA	NA	55642502	55631737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_55633147_55634312_55634481_55634603_55634715_55636002_55636173_55636430_55636495_55636679_55636827_55637193_55637300_55638091_55638898_55639110_55639215_55639354_55639386_55639929_55640070_55642130
tx.8	chr1	+	2257	14	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	8	31	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	139.358420021071	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAAATTTTGCTTAT	NA	False	NA	NA	False	NA	NA	NA	5153362	5232673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
tx.80	chr1	+	1642	3	FSM	ENSMUSG00000025940.7	ENSMUST00000177501.2	1636	3	-3	-3	-3	3	multi-exon	FALSE	canonical	3	53	junction_1	240	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTATGTGTTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	16735427	16748422	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_16735730_16737888_16737998_16747191
tx.800	chr1	-	3288	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	-14	-1585	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289693	134273834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
tx.8000	chr16	-	2942	6	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-110	-3244	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2.13541565040626	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGTATTTCTTGACTT	NA	False	NA	NA	False	NA	NA	NA	55715758	55663559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158_55686914_55710944_55711213_55715650
tx.8001	chr16	-	1342	3	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-114	-25636	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2.5	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTTTTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	55715762	55685951	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_55686914_55710944_55711213_55715650
tx.8002	chr16	-	5537	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	0	2374	0	-2374	multi-exon	FALSE	canonical	3	23	junction_5	7.29383301152419	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTCATACCCTGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	55755218	55722624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
tx.8003	chr16	-	2873	8	ISM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	24	16831	2	7642	5prime_fragment	FALSE	canonical	3	23	junction_2	7.38172039015075	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCCTTCTGGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	55755194	55737081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
tx.8004	chr16	+	600	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	76	1	-70	-1	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	948	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGTGCTGATTGATTTT	NA	False	NA	NA	False	NA	NA	NA	55786713	55791797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
tx.8005	chr16	+	4980	11	FSM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	-61	1	-61	-1	multi-exon	FALSE	canonical	3	98	junction_1	21.3485362495886	237	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGCGTTGAGCTTGA	NA	False	NA	NA	False	NA	NA	NA	55794184	55829275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
tx.8006	chr16	-	7397	4	ISM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	18	1	-2	-1	intron_retention	FALSE	canonical	3	1624	junction_1	383.115590332155	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850041	55835869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586
tx.8007	chr16	-	9494	3	ISM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	16	0	-4	0	intron_retention	FALSE	canonical	3	1624	junction_1	342.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	55850043	55835868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_55837681_55838834_55838891_55842417
tx.8008	chr16	-	2366	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850050	55835869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
tx.8009	chr16	-	2441	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-11	-1492	-1	-1	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850050	55835869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
tx.801	chr1	-	3123	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	245.748087376036	69	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289694	134273834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283452_134288494_134288663_134289271_134289362_134289499
tx.8010	chr16	-	2250	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	44	1	1	-1	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	640	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850058	55835869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
tx.8011	chr16	-	2201	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	-2	1	-2	-1	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850061	55835869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
tx.8012	chr16	-	633	4	FSM	ENSMUSG00000071533.12	ENSMUST00000122253.2	792	4	-3	162	-3	-162	multi-exon	FALSE	canonical	3	1778	junction_3	312.848206004126	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACACGTGCACATTTTT	NA	False	NA	NA	False	NA	NA	NA	55850062	55838644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_55838891_55842417_55842493_55844586_55844802_55849965
tx.8013	chr16	-	1863	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	33	1106	33	-1106	multi-exon	FALSE	canonical	3	404	junction_1	0	228	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTGAATATCAGACTT	7419	False	NA	NA	False	NA	NA	NA	55858149	55854077	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_55855655_55857863
tx.8014	chr16	+	4831	24	FSM	ENSMUSG00000052917.16	ENSMUST00000089362.9	4825	24	-3	-3	1	3	multi-exon	FALSE	canonical	1	1	junction_22	11.8366321271476	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGCTAGCAATGTATTT	NA	False	NA	NA	False	NA	NA	NA	55895827	56010378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55959347_55959464_55971636_55971822_55973737_55974072_55975586_55975739_55978830_55978978_55982737_55982772_55986195_55986376_55990057_55990321_55992112_55992247_55993519_55993637_55996159_55996283_55999319_55999413_55999860_55999986_56000888_56000942_56004509_56004554_56005123_56005193_56006421_56006573_56008597
tx.8015	chr16	-	1913	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	47	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTATAGCATAAATT	4060	False	NA	NA	False	NA	NA	NA	55936673	55932431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr16_-_55934262_55936590
tx.8016	chr16	-	2214	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAAGCATCATCTAAC	4073	False	NA	NA	False	NA	NA	NA	55936660	55932346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr16_-_55934491_55936590
tx.8017	chr16	-	1878	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	67	0	-23	0	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	56537746	56510694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
tx.8018	chr16	+	3781	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	10	2173	10	-1353	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1466	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	NA	False	NA	NA	NA	56942075	56974895	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
tx.8019	chr16	-	1303	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-21	4	-12	-3	multi-exon	TRUE	canonical	3	674	junction_8	39.9499687108764	298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATTTTGATGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	56987716	56977031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
tx.802	chr1	-	3122	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	27	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	402	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289690	134273834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
tx.8020	chr16	-	3579	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	111	0	-20	0	multi-exon	TRUE	canonical	3	134	junction_12	18.4520326427881	313	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	NA	False	NA	NA	NA	57051756	56989224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
tx.8021	chr16	-	970	9	ISM	ENSMUSG00000022748.9	ENSMUST00000114371.5	1150	10	283300	2	283230	-2	3prime_fragment	TRUE	canonical	3	200	junction_5	23.459739448681	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACAGTTTCTCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	57143909	57122364	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826
tx.8022	chr16	-	585	2	Antisense	novelGene_ENSMUSG00000043336.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACAGACGGACACACACA	6000	False	NA	NA	False	NA	NA	NA	57225471	57211475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr16_-_57212040_57225450
tx.8023	chr16	+	5898	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	45	618	45	-618	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCAGAAAATGCCAAATT	NA	False	NA	NA	False	NA	NA	NA	58228850	58289472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
tx.8024	chr16	+	5827	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	40	-617	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	27.1535551181711	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAGAAAATGCCAAATTT	NA	False	NA	NA	False	NA	NA	NA	58228845	58289473	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
tx.8026	chr16	+	3075	7	FSM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	22	0	-14	0	multi-exon	FALSE	canonical	3	129	junction_2	26.4916129285394	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTATTTGTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	58490676	58500749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307_58498413_58499032
tx.8027	chr16	+	2037	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	97	13	-16	-13	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	227	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTCTAAATTGTTTG	NA	False	NA	NA	False	NA	NA	NA	58548369	58554601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
tx.8028	chr16	+	2393	4	ISM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	1094	13	956	-13	3prime_fragment	FALSE	canonical	3	371	junction_3	31.3723161756065	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTCTAAATTGTTTG	NA	False	NA	NA	False	NA	NA	NA	58549366	58554601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_58550111_58551664_58551776_58552943_58553082_58553201
tx.8029	chr16	+	2210	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	13	-64	13	64	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	310	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAGTATCCACTGTTA	NA	False	NA	NA	False	NA	NA	NA	59292150	59312888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
tx.803	chr1	-	3846	7	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_2	231.68009553405	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289696	134273834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134283455_134288494_134288663_134289271_134289362_134289499
tx.8030	chr16	-	1326	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	-2	372	-2	7	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTGTTCTGTTCATGC	NA	False	NA	NA	False	NA	NA	NA	59459532	59433683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
tx.8031	chr16	-	3556	6	FSM	ENSMUSG00000050312.13	ENSMUST00000143314.8	3565	6	9	0	-2	0	multi-exon	FALSE	canonical	3	19	junction_4	5.49181208709839	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	NA	NA	NA	62607131	62552806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596747_62606150_62606261_62607033
tx.8032	chr16	-	3803	6	FSM	ENSMUSG00000050312.13	ENSMUST00000063089.12	3813	6	10	0	-1	0	multi-exon	TRUE	canonical	3	18	junction_4	5.74804314527997	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	NA	NA	NA	62607130	62552806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596995_62606150_62606261_62607033
tx.8033	chr16	-	3512	10	FSM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	16	0	16	0	multi-exon	FALSE	canonical	3	30	junction_2	10.3494497975067	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTATCTAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	62667387	62614047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_62616072_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
tx.8034	chr16	-	3446	9	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	12.6830349285965	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATTTATCTAATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	62667391	62614048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_62616072_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
tx.8035	chr16	+	3296	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	5	2	5	-2	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	428	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGAGCAATTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	62674674	62749707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
tx.8036	chr16	-	5284	4	NNC	ENSMUSG00000059920.10	novel	5522	3	NA	NA	203	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	90.1344674484862	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGCCTTATATTTTAA	NA	False	NA	NA	False	NA	NA	NA	64591321	64582502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_64584709_64584739_64587357_64589286_64589526_64591099
tx.8037	chr16	-	1923	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	203	3396	203	-3396	multi-exon	FALSE	canonical	3	170	junction_1	18.5	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAATAACAAAGCCCATTT	NA	False	NA	NA	False	NA	NA	NA	64591321	64585894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_64587357_64589286_64589526_64591099
tx.8038	chr16	-	4531	2	FSM	ENSMUSG00000047141.6	ENSMUST00000052588.5	4741	2	212	-2	212	2	multi-exon	FALSE	canonical	3	193	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGTGTTCAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	64606472	64600711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_64603640_64604869
tx.8039	chr16	-	6352	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-95	4	-95	0	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	370	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCAAGTGTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	64672110	64600713	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
tx.804	chr1	+	1622	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	209	6	-5	-2	multi-exon	TRUE	canonical	3	291	junction_1	53.3666562565053	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCATTGTCGTCGTG	8180	False	NA	NA	False	NA	NA	NA	134333727	134339472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
tx.8040	chr16	-	5222	9	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-62	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.230765882794	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGCAAGTGTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	64672077	64600714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_64603640_64605965_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
tx.8041	chr16	-	6449	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-74	-1112	intron_retention	FALSE	canonical	3	157	junction_3	6.45865974597561	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTGGAAACTGGTTC	NA	False	NA	NA	False	NA	NA	NA	64672089	64601825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
tx.8042	chr16	+	4398	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	13	14	13	-14	multi-exon	FALSE	canonical	3	981	junction_2	152	1448	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTTTTGAAATCATAT	NA	False	NA	NA	False	NA	NA	NA	64672371	64679856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_64672600_64673161_64673389_64675913
tx.8043	chr16	+	4395	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	13	-14	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	503	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTTTTGAAATCATAT	NA	False	NA	NA	False	NA	NA	NA	64672371	64679856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_64672600_64673161_64673389_64675916
tx.8044	chr16	+	4921	2	NNC	ENSMUSG00000054604.8	novel	760	2	NA	NA	50	-13	intron_retention	FALSE	canonical	3	384	junction_1	0	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTGAAATCATATT	NA	False	NA	NA	False	NA	NA	NA	64672408	64679857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_64673389_64675916
tx.8045	chr16	+	4921	2	FSM	ENSMUSG00000054604.8	ENSMUST00000136532.2	760	2	-656	-3505	50	-16	multi-exon	FALSE	canonical	3	981	junction_1	0	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAGTTTTTGAAATCAT	NA	False	NA	NA	False	NA	NA	NA	64672408	64679854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_64673389_64675913
tx.8046	chr16	-	1863	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	9	0	9	0	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCCTAACGCGCATCA	NA	False	NA	NA	False	NA	NA	NA	65359603	65336013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
tx.8047	chr16	+	2838	16	NIC	ENSMUSG00000022707.17	novel	2736	18	NA	NA	6	0	intron_retention	TRUE	canonical	1	5	junction_14	8.94278107376745	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTAATGTGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	70110980	70366602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325899_70357911_70358030_70365876
tx.8048	chr16	+	7591	29	FSM	ENSMUSG00000022883.12	ENSMUST00000023600.8	7563	29	-27	-1	-27	1	multi-exon	FALSE	canonical	0	0	junction_6	15.2815414865151	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTCCTTGTGTTGATT	NA	False	NA	NA	False	NA	NA	NA	72460009	72842984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756968_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
tx.8049	chr16	+	7536	28	NIC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	15.7919428676021	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	NA	NA	NA	72460036	72842983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756968_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
tx.805	chr1	+	2208	9	FSM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	210	2	-4	-2	multi-exon	FALSE	canonical	3	35	junction_5	130.869925880624	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCATTGTCGTCGTG	8181	False	NA	NA	False	NA	NA	NA	134333728	134339472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230_134338331_134338644
tx.8050	chr16	+	7369	28	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.9410780633455	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	NA	NA	NA	72460038	72842983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756968_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72792004_72792048_72798806_72798962_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
tx.8051	chr16	+	2955	6	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	17393	3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.2727787306346	34	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTTGTGTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	72820701	72842986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_72820840_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
tx.8052	chr16	-	4036	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	30	171	0	-171	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTGTTTTCTATCTTA	4011	False	NA	NA	False	NA	NA	NA	75563679	75552080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
tx.8053	chr16	-	8028	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	-45	-3454	-45	-8	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATACTTTGTCCTAAGA	NA	False	NA	NA	False	NA	NA	NA	76169982	76084295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
tx.8054	chr16	+	4779	24	FSM	ENSMUSG00000022867.12	ENSMUST00000023580.8	4776	24	-2	-1	-2	1	multi-exon	TRUE	canonical	3	45	junction_20	12.0225056756949	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTCTATTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	76810591	76913669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
tx.8055	chr16	+	2922	18	ISM	ENSMUSG00000022867.12	ENSMUST00000239066.2	4986	26	1	22842	1	10	5prime_fragment	FALSE	canonical	3	54	junction_8	11.7334879931088	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGACTACAGACTAATTT	NA	False	NA	NA	False	NA	NA	NA	76810594	76890826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490
tx.8056	chr16	+	1733	8	FSM	ENSMUSG00000022865.15	ENSMUST00000114229.4	1657	8	-73	-3	-73	3	multi-exon	FALSE	canonical	3	10	junction_7	23.9965983983955	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACATTTTAGATTA	NA	False	NA	NA	False	NA	NA	NA	78098570	78156665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075_78133260_78156098
tx.8057	chr16	+	5528	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	209	5	-51	-5	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTTGCGGTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	78098592	78137643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
tx.8058	chr16	-	1399	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	12	3	12	-3	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	240	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTGTGGTTTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	78173686	78156750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
tx.8059	chr16	-	5857	5	NIC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	21	-8	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	108.368295640376	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGCTATCTCCGAGCCTC	3213	False	NA	NA	False	NA	NA	NA	78373575	78337233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373370
tx.806	chr1	+	1841	8	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	337	junction_4	39.0227563122351	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCATTGTCGTCGTG	8220	False	NA	NA	False	NA	NA	NA	134333767	134339472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
tx.8060	chr16	-	5121	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	-50	-3495	1	-856	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTTTGTGGTGTGGGGT	3193	False	NA	NA	False	NA	NA	NA	78373595	78338081	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
tx.8061	chr16	-	6176	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-50	1	1	-1	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGAGCCTCGGTTGAT	3193	False	NA	NA	False	NA	NA	NA	78373595	78337226	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
tx.8062	chr16	-	6007	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	-115	-4621	-64	-2	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCGAGCCTCGGTTGA	3128	False	NA	NA	False	NA	NA	NA	78373660	78337227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
tx.8063	chr16	-	5364	3	ISM	ENSMUSG00000022864.15	ENSMUST00000231973.2	5687	5	28703	2	12313	-2	3prime_fragment	FALSE	canonical	3	299	junction_1	10.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCGAGCCTCGGTTGA	NA	False	NA	NA	False	NA	NA	NA	78344819	78337227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_78342173_78343393_78343457_78344463
tx.8064	chr16	-	5971	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-125	-3202	-64	-3	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTCCGAGCCTCGGTTG	3128	False	NA	NA	False	NA	NA	NA	78373660	78337228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
tx.8065	chr16	-	6091	5	NNC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	130.840312977308	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCGAGCCTCGGTTGA	3171	False	NA	NA	False	NA	NA	NA	78373617	78337227	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373184
tx.8066	chr16	-	1091	10	FSM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	498	705	-14	-705	multi-exon	FALSE	canonical	3	703	junction_1	110.666443551761	488	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	84532132	84515168	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
tx.8067	chr16	-	2618	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-7	-707	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	316.524880538639	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTTTGTCCCTGCT	NA	False	NA	NA	False	NA	NA	NA	84532125	84515170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_84516809_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
tx.8068	chr16	+	4175	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1858.65795340485	15	4	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATTTATGGTCTATGAA	NA	False	NA	NA	False	NA	NA	NA	84571011	84622815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84612056_84612157_84613153_84613285_84618147_84618191_84619674
tx.8069	chr16	+	4374	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	1	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	1361.98577452189	2187	4	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	NA	False	NA	NA	False	NA	NA	NA	84571011	84622814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
tx.807	chr1	+	2088	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	22	1013	22	-1010	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	1091	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGCATTCAAAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	134343137	134360076	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
tx.8070	chr16	+	4293	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	58	-3	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCATTTATGGTCTATG	NA	False	NA	NA	False	NA	NA	NA	84571068	84622813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
tx.8071	chr16	+	2196	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	-199	1	64	-1	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTCTTCAGAATAAACA	NA	False	NA	NA	False	NA	NA	NA	84571074	84607883	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
tx.8072	chr16	+	3570	5	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	3536	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1699.43122838201	26	4	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	3334	False	NA	NA	False	NA	NA	NA	84609830	84622814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
tx.8073	chr16	+	4142	4	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	5034	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1850.38128203051	21	4	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	4832	False	NA	NA	False	NA	NA	NA	84611328	84622814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_84612157_84613153_84613285_84618147_84618191_84619674
tx.8074	chr16	+	6176	2	NIC	ENSMUSG00000053062.17	novel	659	7	NA	NA	8860	-2	intron_retention	FALSE	canonical	3	3297	junction_1	0	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	8658	False	NA	NA	False	NA	NA	NA	84615154	84622814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_84618191_84619674
tx.8075	chr16	-	534	5	ISM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	645	0	-26	0	3prime_fragment	FALSE	canonical	3	198	junction_4	3188.04854103572	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	NA	False	NA	NA	NA	84631746	84624758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696
tx.8076	chr16	-	3777	3	FSM	ENSMUSG00000022890.14	ENSMUST00000146103.2	526	3	-3248	-3	-23	0	multi-exon	FALSE	canonical	3	6096	junction_1	588.5	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	NA	False	NA	NA	NA	84631743	84624758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_84624884_84625312_84625438_84628216
tx.8077	chr16	-	483	4	ISM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	763	0	-30	0	3prime_fragment	FALSE	canonical	3	5740	junction_3	655.078790850553	1036	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	NA	False	NA	NA	NA	84631750	84624758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696
tx.8078	chr16	+	4674	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-6	-2466	-6	2	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	502	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTTTTTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	84631806	84660669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
tx.8079	chr16	+	5035	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	186.346153405132	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	84631947	84660667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
tx.808	chr1	+	2178	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	266	1002	158	-1002	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGAGTTAACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	134343459	134360084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
tx.8080	chr16	+	4777	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	212	-2	212	2	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	233	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTTTTTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	84632223	84660669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
tx.8082	chr16	-	3301	17	FSM	ENSMUSG00000022892.12	ENSMUST00000226232.2	3120	17	24	-205	-4	-1	multi-exon	FALSE	canonical	3	10	junction_10	13.879925927396	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTTTGAAGGGTG	7378	False	NA	NA	False	NA	NA	NA	84970599	84751326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
tx.8083	chr16	-	3356	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	55	4756	-4	-1	multi-exon	FALSE	canonical	3	25	junction_10	12.3870677065552	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACGTTTCTTTGAAGGG	7378	False	NA	NA	False	NA	NA	NA	84970599	84751328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
tx.8084	chr16	+	1846	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	40	-2	-2	2	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCCTTTGTGTAGCGT	NA	False	NA	NA	False	NA	NA	NA	87151112	87165632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
tx.8085	chr16	+	1700	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	2	-2	2	2	multi-exon	FALSE	canonical	3	22	junction_4	45.8768732587564	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCCTTTGTGTAGCGT	NA	False	NA	NA	False	NA	NA	NA	87151116	87165632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
tx.8086	chr16	-	5985	21	ISM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	16552	2	16503	-2	3prime_fragment	FALSE	canonical	3	153	junction_13	19.0690193769895	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGGCCCATTCTTC	NA	False	NA	NA	False	NA	NA	NA	87212948	87173540	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438
tx.8087	chr16	-	6740	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	81	922	32	-922	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGACTGTTATTGAAAT	NA	False	NA	NA	False	NA	NA	NA	87229419	87174460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
tx.8088	chr16	-	2017	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	39	junction_1	7.71362431027076	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTGTTATCAGTAG	NA	False	NA	NA	False	NA	NA	NA	87237469	87230294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
tx.8089	chr16	+	2915	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	288	2	6	-2	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTATTAGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	87251878	87280403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
tx.809	chr1	+	3263	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	1	144	1	1	multi-exon	TRUE	canonical	3	104	junction_1	24.9889231659096	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGAGAATTTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	134383269	134418612	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
tx.8090	chr16	-	1842	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	3	549	3	113	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	4285	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	NA	False	NA	NA	NA	87292758	87280762	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
tx.8091	chr16	-	7347	29	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_25	9.36450092375565	53	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7775	False	NA	NA	False	NA	NA	NA	89940728	89583998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89940572
tx.8092	chr16	-	7178	28	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_25	13.3559478999909	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7775	False	NA	NA	False	NA	NA	NA	89940728	89583998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752996_89863408_89863461_89940572
tx.8093	chr16	+	641	5	FSM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	320.427351360648	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	90017641	90023217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032_90022151_90023037
tx.8094	chr16	+	4590	2	NIC	ENSMUSG00000022982.11	novel	3970	3	NA	NA	99	0	intron_retention	FALSE	canonical	3	813	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	90017740	90023217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_90022151_90023037
tx.8095	chr16	+	468	4	ISM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	2023	0	2023	0	3prime_fragment	FALSE	canonical	3	621	junction_1	78.8416133777081	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	90019664	90023217	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_90019765_90021243_90021314_90022032_90022151_90023037
tx.8096	chr16	-	4348	20	FSM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	-173	0	22	0	multi-exon	TRUE	canonical	3	110	junction_9	44.050650776067	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	NA	NA	NA	90081369	90025838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
tx.8097	chr16	-	4416	20	NIC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_2	45.9499908819345	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	NA	NA	NA	90081371	90025838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
tx.8098	chr16	+	5484	11	FSM	ENSMUSG00000053414.9	ENSMUST00000065856.8	5393	11	-90	-1	-90	1	multi-exon	FALSE	canonical	3	95	junction_1	15.4272486205415	258	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGCTTTGTTTATTG	NA	False	NA	NA	False	NA	NA	NA	90182810	90296442	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_90183605_90229401_90229695_90244197_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
tx.8099	chr16	-	1289	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	42	2	42	-2	multi-exon	FALSE	canonical	3	276	junction_1	13.865424623862	165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTTTGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	90524250	90516201	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
tx.81	chr1	-	4350	7	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.84754619472471	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGTGTCTTTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	17168124	17065161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_17066741_17066787_17067265_17067687_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
tx.810	chr1	+	3302	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	-23	-2	1	2	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAGAATTTGTGGGTA	NA	False	NA	NA	False	NA	NA	NA	134383269	134418613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
tx.8100	chr16	-	4088	18	ISM	ENSMUSG00000039929.15	ENSMUST00000140920.2	7344	39	35677	0	-1924	0	3prime_fragment	FALSE	canonical	3	66	junction_16	16.9528146298906	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	90571603	90548414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936
tx.8101	chr16	-	7353	39	FSM	ENSMUSG00000039929.15	ENSMUST00000140920.2	7344	39	-9	0	-9	0	multi-exon	FALSE	canonical	3	66	junction_16	15.3989422955836	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	8670	False	NA	NA	False	NA	NA	NA	90607289	90548414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
tx.8102	chr16	+	1689	8	FSM	ENSMUSG00000039903.19	ENSMUST00000037539.15	2142	8	261	192	7	-2	multi-exon	FALSE	canonical	2	6	junction_2	3.62530786869986	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATCTGTACATTAAT	NA	False	NA	NA	False	NA	NA	NA	90628007	90701581	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
tx.8103	chr16	-	1111	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	285	34	-3	-34	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	391	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGGACAGCTGTGTCAC	NA	False	NA	NA	False	NA	NA	NA	90731717	90722730	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
tx.8104	chr16	-	6823	28	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_27	11.5384488762197	28	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACTTCTTTACTCAAA	2441	False	NA	NA	False	NA	NA	NA	90807956	90732985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
tx.8105	chr16	-	6827	29	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-36	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	14.7490487413769	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTTTACTCAAAAGGG	2360	False	NA	NA	False	NA	NA	NA	90808037	90732981	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
tx.8106	chr16	-	6791	28	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-43	3	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	10.2247715554318	44	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACTTCTTTACTCAAA	2353	False	NA	NA	False	NA	NA	NA	90808044	90732985	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
tx.8107	chr16	-	6839	29	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	17	4	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	15.5596285565024	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACTTCTTTACTCAAAA	2465	False	NA	NA	False	NA	NA	NA	90807932	90732984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
tx.8108	chr16	-	5872	11	ISM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	10145	-876	873	-3	3prime_fragment	FALSE	canonical	3	97	junction_10	76.0959920100921	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTTTGTTGTATCTTGC	NA	False	NA	NA	False	NA	NA	NA	90830907	90810927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303
tx.8109	chr16	-	5556	10	ISM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	13925	4	-104	-4	intron_retention	FALSE	canonical	3	305	junction_4	23.8083915074673	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTTTTGTTGTATCTTG	NA	False	NA	NA	False	NA	NA	NA	90827506	90810928	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117
tx.811	chr1	+	2004	5	ISM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	30342	0	10617	0	3prime_fragment	FALSE	canonical	3	174	junction_3	9.17537465175128	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTAAGAGAATTTGTGGG	5527	False	NA	NA	False	NA	NA	NA	134413634	134418611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
tx.8110	chr16	-	4433	17	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	49	-3	intron_retention	FALSE	canonical	3	98	junction_10	90.7771137181614	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTTTGTTGTATCTTGC	NA	False	NA	NA	False	NA	NA	NA	90841382	90810927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
tx.8111	chr16	-	3929	18	FSM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	-323	-874	56	-5	multi-exon	FALSE	canonical	3	97	junction_10	93.9504028766883	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCCTTTTGTTGTATCTT	NA	False	NA	NA	False	NA	NA	NA	90841375	90810929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
tx.8112	chr16	-	3926	18	FSM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	44	3	44	-3	multi-exon	FALSE	canonical	3	98	junction_10	93.8519042470415	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTTTGTTGTATCTTGC	NA	False	NA	NA	False	NA	NA	NA	90841387	90810927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
tx.8113	chr16	-	3704	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	46	127	intron_retention	FALSE	canonical	3	97	junction_10	90.8908815214706	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGTGTTTAGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	90841385	90811676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
tx.8114	chr16	-	7087	16	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	52	-25	intron_retention	FALSE	canonical	3	97	junction_10	88.458402025409	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGTCCTTAAATGTGA	NA	False	NA	NA	False	NA	NA	NA	90841379	90811828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
tx.8115	chr16	-	4039	6	NIC	ENSMUSG00000022974.13	novel	1415	8	NA	NA	45	-540	intron_retention	FALSE	canonical	3	169	junction_4	10.0399203184089	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGGAGAGGCTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90841386	90828991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
tx.8116	chr16	+	1157	7	FSM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	-56	-2	11	2	multi-exon	FALSE	canonical	3	47	junction_6	3.19722101554181	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTCTGTCTCTAATGT	NA	False	NA	NA	False	NA	NA	NA	91169681	91190930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
tx.8117	chr16	+	1815	7	FSM	ENSMUSG00000022969.14	ENSMUST00000023691.12	1850	7	31	4	31	-4	multi-exon	FALSE	canonical	3	23	junction_1	1.63299316185545	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGGGGGTTTGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	91203153	91222718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91203261_91204505_91204630_91208770_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
tx.8118	chr16	+	3908	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	-2	3	-2	1	multi-exon	FALSE	canonical	3	156	junction_4	11.4908659377786	321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGGATATTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	91282123	91304326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
tx.8119	chr16	+	3723	10	NIC	ENSMUSG00000022967.14	novel	3909	11	NA	NA	4	1	intron_retention	FALSE	canonical	3	7	junction_2	50.8296598551245	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGGATATTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	91282129	91304326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_91282305_91286583_91286708_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
tx.812	chr1	+	1982	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	-7	886	-7	-886	multi-exon	FALSE	canonical	3	479	junction_1	0	635	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTGTTTTCTGGGTG	6631	False	NA	NA	False	NA	NA	NA	134422378	134435626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134422548_134433813
tx.8120	chr16	+	2103	7	FSM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	-12	1617	-12	-1163	multi-exon	FALSE	canonical	3	18	junction_6	4.14996653266291	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTATCTAAACTTGTAT	NA	False	NA	NA	False	NA	NA	NA	91343947	91360894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91344121_91351835_91351969_91354772_91354967_91356864_91357014_91357432_91357593_91358507_91358666_91359758
tx.8121	chr16	-	2253	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	93	1	-43	-1	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAATCTGAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	91394595	91371391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
tx.8122	chr16	-	3298	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	7	213	7	5	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	3293	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTATCTAGCATTTAT	NA	False	NA	NA	False	NA	NA	NA	91443833	91418286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
tx.8123	chr16	+	8361	12	FSM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	354	16	-19	-1	multi-exon	FALSE	canonical	3	185	junction_11	92.9729366114073	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTTGTGTCTTATTCT	NA	False	NA	NA	False	NA	NA	NA	91444747	91476079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
tx.8124	chr16	+	7958	5	FSM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-13	0	-12	0	multi-exon	FALSE	canonical	3	129	junction_4	147.892697588488	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGCCATTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	91444754	91460921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91459379
tx.8125	chr16	+	8408	12	FSM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	-9	0	-9	0	multi-exon	FALSE	canonical	3	171	junction_11	95.0516171212009	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	91444757	91476083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
tx.8126	chr16	+	6521	10	ISM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	8657	12	-3780	0	3prime_fragment	FALSE	canonical	3	185	junction_9	65.5491522296413	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	91453050	91476083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
tx.8127	chr16	+	5769	5	ISM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	8219	0	-3845	0	3prime_fragment	FALSE	canonical	3	68	junction_4	133.965247359157	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGTGCAAAATCACGC	NA	False	NA	NA	False	NA	NA	NA	91452985	91462596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91461807
tx.8128	chr16	+	5161	3	ISM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	9248	-5	-2815	5	3prime_fragment	FALSE	canonical	3	129	junction_2	152	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATTGTGTGTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	91454015	91460926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_91457469_91458988_91459150_91459379
tx.8129	chr16	+	6318	10	ISM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	8540	0	-3524	0	3prime_fragment	FALSE	canonical	3	171	junction_9	68.3299908848303	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	91453306	91476083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
tx.8130	chr16	+	5053	4	ISM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	23900	0	430	0	3prime_fragment	FALSE	canonical	3	171	junction_3	71.6767434776131	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	3487	False	NA	NA	False	NA	NA	NA	91468666	91476083	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_91472437_91474292_91474365_91474476_91474593_91474988
tx.8131	chr16	-	2374	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	0	-9	0	9	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	221	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACAAATAGTGCTTAG	NA	False	NA	NA	False	NA	NA	NA	91485658	91476143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
tx.8132	chr16	-	1481	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	349	135	-3	69	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	752	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATTTGATTTTGTTATC	9177	False	NA	NA	False	NA	NA	NA	91525514	91486344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
tx.8133	chr16	+	3447	22	NIC	ENSMUSG00000022957.21	novel	5147	27	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_21	40.4725488557906	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGAGAGAGCAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	91526176	91650148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91649750
tx.8134	chr16	+	3794	16	FSM	ENSMUSG00000022957.21	ENSMUST00000095909.10	6103	16	-56	2365	33	1678	multi-exon	FALSE	canonical	3	154	junction_12	15.0928975202098	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATAGCTGTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	91526201	91626876	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
tx.8135	chr16	+	3511	21	ISM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-52	20198	-34	141	5prime_fragment	FALSE	canonical	3	117	junction_18	19.7557586541241	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCCGTCCTGGAGGCC	NA	False	NA	NA	False	NA	NA	NA	91526206	91648345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693
tx.8136	chr16	+	5412	29	FSM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-48	0	-30	0	multi-exon	FALSE	canonical	3	117	junction_18	26.3675937468704	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAACGTCTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	91526210	91668543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
tx.8137	chr16	-	740	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	93	5	-43	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	1319	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCGTGAGGAGCCTTGT	904	False	NA	NA	False	NA	NA	NA	91728482	91722106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
tx.8138	chr16	+	804	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	42	0	42	0	multi-exon	FALSE	canonical	3	238	junction_1	10.5	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	6327	False	NA	NA	False	NA	NA	NA	91855199	91909115	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_91855369_91896481_91896622_91908620
tx.8139	chr16	+	516	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	1	0	1	0	multi-exon	FALSE	canonical	3	229	junction_1	48.3482735529983	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTGCATTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	92098174	92109929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
tx.814	chr1	+	5812	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	3	2899	3	864	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCCTTTAAGCCATGT	6718	False	NA	NA	False	NA	NA	NA	134487911	134560124	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
tx.8140	chr16	-	2189	4	FSM	ENSMUSG00000022951.17	ENSMUST00000023672.10	2190	4	2	-1	2	-1	multi-exon	FALSE	canonical	3	20	junction_3	123.764112551077	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGTTGTTGGTCGTTTTC	NA	False	NA	NA	False	NA	NA	NA	92196963	92188841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92196783
tx.8141	chr16	-	2360	4	FSM	ENSMUSG00000022951.17	ENSMUST00000060005.15	2324	4	-36	0	-36	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	420	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTTGGTCGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	92263070	92188840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
tx.8142	chr16	-	1752	11	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	28.7090578041147	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	NA	False	NA	NA	NA	93400701	93380344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
tx.8143	chr16	-	1592	11	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	2	0	combination_of_known_splicesites	TRUE	canonical	3	12	junction_10	36.3512035564161	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	NA	False	NA	NA	NA	93400949	93380344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400861
tx.8144	chr16	+	1062	3	FSM	ENSMUSG00000051483.10	ENSMUST00000039659.9	1237	3	7	168	7	-7	multi-exon	FALSE	canonical	3	426	junction_1	12.5	139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGGTTTACAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	93404731	93407225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_93405143_93405676_93405785_93406682
tx.8145	chr16	+	1192	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	122	junction_2	11	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTGGTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	93480080	93487878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_93480502_93481934_93482043_93487215
tx.8146	chr16	+	7292	37	NIC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-1	1	combination_of_known_junctions	TRUE	canonical	3	19	junction_4	15.285831210715	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATTGTCATGTGTATA	NA	False	NA	NA	False	NA	NA	NA	93508820	93607475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
tx.8147	chr16	+	7289	37	FSM	ENSMUSG00000022946.11	ENSMUST00000045004.11	7319	37	29	1	-1	1	multi-exon	FALSE	canonical	3	19	junction_4	15.0894452523839	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATTGTCATGTGTATA	NA	False	NA	NA	False	NA	NA	NA	93508820	93607475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595793_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
tx.8148	chr16	-	2696	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-159	850	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	67	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTTAGTTCAC	6412	False	NA	NA	False	NA	NA	NA	93591948	93588173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_93590271_93590397_93590505_93591456
tx.8149	chr16	-	2718	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	-298	-840	-298	840	multi-exon	FALSE	canonical	3	7	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATTAATTAAAAAAAGAT	6273	False	NA	NA	False	NA	NA	NA	93592087	93588183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_93590271_93591456
tx.815	chr1	+	2890	5	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	64363	2410	1734	1353	3prime_fragment	FALSE	canonical	3	850	junction_3	87.0786282620483	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAACCCAGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	134552271	134560613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
tx.8150	chr16	+	1915	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	7	0	7	0	multi-exon	FALSE	canonical	3	827	junction_1	52.2487224157954	666	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4373	False	NA	NA	False	NA	NA	NA	93680795	93703003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
tx.8151	chr16	+	1883	13	ISM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	529	0	228	0	3prime_fragment	FALSE	canonical	3	863	junction_6	46.2174810602607	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4895	False	NA	NA	False	NA	NA	NA	93681317	93703003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
tx.8152	chr16	+	1693	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-486	1076	at_least_one_novel_splicesite	FALSE	canonical	3	232	junction_1	14.5	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGAGCATGTGTCCTTC	2378	False	NA	NA	False	NA	NA	NA	93811813	93814171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_93811971_93812291_93812370_93812713
tx.8153	chr16	+	1054	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-574	1916	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	36.1693547388148	38	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2290	False	NA	NA	False	NA	NA	NA	93811725	93815011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572
tx.8154	chr16	+	1426	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-625	1916	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_2	43.5	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2239	False	NA	NA	False	NA	NA	NA	93811674	93815011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_+_93812370_93812713_93813006_93814572
tx.8155	chr16	-	5248	11	FSM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	-10	-1217	-10	111	multi-exon	FALSE	canonical	3	36	junction_1	5.0438080851674	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTCCATTCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	94091155	93930053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
tx.8156	chr16	-	5078	11	FSM	ENSMUSG00000040820.17	ENSMUST00000163193.9	5371	11	-19	312	-11	110	multi-exon	FALSE	canonical	1	2	junction_10	12.9614813968157	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCAGTCCATTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	94114441	93930054	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94114376
tx.8157	chr16	-	5208	11	NNC	ENSMUSG00000040820.17	novel	4021	11	NA	NA	-5	111	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	11.5861986863682	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTCCATTCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	94091150	93930053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088685_94088786_94090921
tx.8158	chr16	+	1517	4	FSM	ENSMUSG00000022941.9	ENSMUST00000023660.9	1531	4	14	0	14	0	multi-exon	FALSE	canonical	3	15	junction_3	1.63299316185545	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACAATCATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	94129292	94137794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_94129457_94130204_94130281_94134114_94134183_94136585
tx.8159	chr16	-	1146	4	FSM	ENSMUSG00000022940.18	ENSMUST00000138514.2	695	4	-197	-254	6	0	multi-exon	FALSE	canonical	3	395	junction_3	26.0298973404728	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	NA	NA	NA	94171565	94165310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947
tx.816	chr1	+	944	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_1	233.142779333943	46	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	NA	False	NA	NA	NA	134890297	134901900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_134890348_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
tx.8160	chr16	-	734	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	6	5	6	0	multi-exon	TRUE	canonical	3	162	junction_4	117.933243828871	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	NA	NA	NA	94171565	94165310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
tx.8161	chr16	-	905	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113914.8	912	5	2	5	2	0	multi-exon	FALSE	canonical	3	19	junction_4	179.103845575688	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	NA	NA	NA	94171872	94165310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171599
tx.8162	chr16	-	803	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	157	6	-28	-1	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAACCTTGAGTAGATCT	NA	False	NA	NA	False	NA	NA	NA	94171396	94165311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
tx.8163	chr16	+	6276	36	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	31.5407866815302	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	NA	NA	NA	94171597	94270080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_94171721_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
tx.8164	chr16	+	6027	33	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	32.491690644494	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	NA	NA	NA	94171612	94270080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_94171721_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
tx.8165	chr16	+	6413	37	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_28	29.9596436379604	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	NA	NA	NA	94171621	94270078	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_94171721_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
tx.8166	chr16	+	7403	46	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_37	32.7846998340671	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTTCACTGTCGTCCT	NA	False	NA	NA	False	NA	NA	NA	94171598	94270079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_94171831_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
tx.8167	chr16	+	7283	46	FSM	ENSMUSG00000040785.20	ENSMUST00000117648.9	7415	46	133	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_37	31.7357141963995	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	NA	NA	NA	94171609	94270080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
tx.8168	chr16	+	3726	14	ISM	ENSMUSG00000040785.20	ENSMUST00000231915.2	5833	41	58702	-982	-692	1	3prime_fragment	FALSE	canonical	0	0	junction_5	36.5314163248323	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	NA	NA	NA	94243432	94270080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_+_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
tx.8169	chr16	-	2159	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	384	4	-5	-4	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	471	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGTTTGGACTGCATA	NA	False	NA	NA	False	NA	NA	NA	94327305	94298645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
tx.817	chr1	+	1091	7	FSM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	25	0	-1	0	multi-exon	FALSE	canonical	3	373	junction_1	158.492902049272	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	NA	False	NA	NA	NA	134890327	134901900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
tx.8170	chr16	+	5880	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-329	208	-329	-208	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTTACTATGCTT	NA	False	NA	NA	False	NA	NA	NA	94370539	94495718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
tx.8171	chr16	+	5847	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-325	-210	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGTCTTTACTATGC	NA	False	NA	NA	False	NA	NA	NA	94370543	94495716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
tx.8172	chr16	+	5776	11	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-313	-210	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	49.351393090773	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGTCTTTACTATGC	NA	False	NA	NA	False	NA	NA	NA	94370555	94495716	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_+_94371394_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
tx.8173	chr16	+	5765	11	FSM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	-799	-2655	-330	-211	multi-exon	FALSE	canonical	2	15	junction_1	53.9285638599805	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGAGTCTTTACTATG	NA	False	NA	NA	False	NA	NA	NA	94370538	94495715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_94371394_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
tx.8174	chr16	+	3542	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	346	2	-34	-2	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	312	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTTTGTAATGTTGGA	NA	False	NA	NA	False	NA	NA	NA	95503287	95522093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
tx.8175	chr16	-	1010	7	FSM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	34	0	34	0	multi-exon	FALSE	canonical	3	1101	junction_3	73.0062782688357	437	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	False	NA	-97	True	NA	NA	NA	95792126	95781132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
tx.8176	chr16	-	5391	2	ISM	ENSMUSG00000022914.18	ENSMUST00000232755.2	9843	41	77863	-582	4429	582	3prime_fragment	FALSE	canonical	3	128	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACAGTCTCTTGTATA	2936	False	NA	NA	False	NA	NA	NA	95805784	95799888	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_95804555_95805059
tx.8177	chr16	-	10821	44	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-6	-502	combination_of_known_junctions	TRUE	canonical	3	75	junction_31	102.463997291444	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCAGGTAGTTCCTAG	NA	False	NA	NA	False	NA	NA	NA	95883732	95800972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
tx.8178	chr16	-	2392	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	425	junction_4	11.1214882097676	402	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	NA	False	NA	NA	False	NA	NA	NA	95883736	95867867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
tx.8179	chr16	-	1180	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	23	971	23	645	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	2311	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAAATGCCTGATTAA	NA	False	NA	NA	False	NA	NA	NA	95928906	95922788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
tx.818	chr1	+	4176	4	NIC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-3553	0	intron_retention	FALSE	canonical	3	687	junction_3	70.9804354890995	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	NA	False	NA	NA	NA	134895463	134901900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_134899094_134899638_134899738_134899843_134899928_134901537
tx.8180	chr16	+	2495	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-5	5	-5	1	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	390	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTACTGTGGAAAGCGT	NA	False	NA	NA	False	NA	NA	NA	95946601	95959047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
tx.8181	chr16	+	2029	9	FSM	ENSMUSG00000000159.17	ENSMUST00000000163.13	1851	9	-177	-1	-51	1	multi-exon	TRUE	canonical	0	0	junction_1	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTTGTATTATCTTTT	6138	False	NA	NA	False	NA	NA	NA	96162816	96205229	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_+_96163045_96165206_96165285_96174029_96174348_96179284_96179585_96187685_96187827_96192219_96192245_96197568_96197670_96199090_96199165_96204465
tx.8182	chr16	-	1167	8	FSM	ENSMUSG00000022938.9	ENSMUST00000231414.2	806	8	-8	-353	-8	228	multi-exon	FALSE	canonical	3	14	junction_7	10.770329614269	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTGGGGAATGAATG	NA	False	NA	NA	False	NA	NA	NA	97313738	97271936	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313657
tx.8183	chr16	-	3579	8	FSM	ENSMUSG00000005251.16	ENSMUST00000019386.10	3591	8	12	0	12	0	multi-exon	FALSE	canonical	3	41	junction_1	9.512612465478	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCAGACTATTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	97564975	97543132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97551343_97552693_97552843_97556267_97556560_97564727
tx.8184	chr16	-	6174	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	11.2545726896769	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCCTCTGCTCTCC	6488	False	NA	NA	False	NA	NA	NA	97653045	97592719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
tx.8185	chr16	-	6165	24	FSM	ENSMUSG00000014039.19	ENSMUST00000121584.8	6194	24	29	0	29	0	multi-exon	FALSE	canonical	0	0	junction_23	11.3557360404684	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCCTCTGCTCTCC	6512	False	NA	NA	False	NA	NA	NA	97653021	97592719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
tx.8186	chr16	-	6091	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	11.3557360404684	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCCTCTGCTCTCC	6484	False	NA	NA	False	NA	NA	NA	97653049	97592719	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618150_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
tx.8187	chr16	-	4489	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	27	2040	0	1501	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGGTATGGTGGTACA	NA	False	NA	NA	False	NA	NA	NA	97723806	97658448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
tx.8188	chr16	-	2966	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	26.5082325048756	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTGTGTTCTATGCAGA	NA	False	NA	NA	False	NA	NA	NA	97723806	97659947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713881_97723254
tx.8189	chr16	-	4138	2	FSM	ENSMUSG00000046962.17	ENSMUST00000231256.2	2735	2	518	-1921	518	-10	multi-exon	FALSE	canonical	3	41	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATTTATAATGCAGT	9966	False	NA	NA	False	NA	NA	NA	97753780	97749042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_97752070_97752669
tx.819	chr1	+	895	6	ISM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	5161	0	-3553	0	3prime_fragment	FALSE	canonical	3	687	junction_5	56.6568618968612	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	NA	False	NA	NA	NA	134895463	134901900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
tx.8190	chr16	-	4856	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-2	-9	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	4.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTTATAATGCAGTT	NA	False	NA	NA	False	NA	NA	NA	97763817	97749041	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_97752070_97752669_97754294_97763613
tx.8191	chr16	-	4400	4	NNC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	332	961	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	33.1360830515618	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTTTGCTACTTGATT	-1	True	NA	NA	False	NA	NA	NA	97763461	97749999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr16_-_97752070_97752669_97754294_97757957_97758101_97762898
tx.8192	chr16	-	3690	3	FSM	ENSMUSG00000046962.17	ENSMUST00000113734.9	6010	3	-6	2326	-5	0	multi-exon	FALSE	canonical	3	60	junction_2	13	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGGGATGAATTAAT	NA	False	NA	NA	False	NA	NA	NA	97763827	97750960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_97754294_97757957_97758101_97763613
tx.8193	chr16	-	4807	2	NIC	ENSMUSG00000046962.17	novel	397	3	NA	NA	-8	-572	intron_retention	FALSE	canonical	3	25	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTATAGAAGCTATATGT	NA	False	NA	NA	False	NA	NA	NA	97763830	97749604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_97754294_97763712
tx.8194	chr16	-	4581	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-12	-1497	0	-431	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTTGCCATCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	97763821	97749463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
tx.8195	chr16	-	3540	2	FSM	ENSMUSG00000046962.17	ENSMUST00000063605.15	5463	2	-5	1928	1	0	multi-exon	FALSE	canonical	3	32	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGGGATGAATTAAT	NA	False	NA	NA	False	NA	NA	NA	97763820	97750960	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr16_-_97754294_97763613
tx.8196	chr16	-	7314	4	ISM	ENSMUSG00000116673.2	ENSMUST00000232614.2	497	5	-11	7542	-11	2840	5prime_fragment	FALSE	canonical	3	34	junction_3	16.6599986661331	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCAGTCTTTCATCATC	NA	False	NA	NA	False	NA	NA	NA	97883221	97860871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883089
tx.8197	chr16	-	7296	4	NIC	ENSMUSG00000116673.2	novel	2142	5	NA	NA	-9	2840	intron_retention	FALSE	canonical	3	11	junction_3	25.8069758011279	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCAGTCTTTCATCATC	NA	False	NA	NA	False	NA	NA	NA	97883659	97860871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr16_-_97867866_97868954_97869016_97869203_97869331_97883545
tx.8198	chr17	+	4884	20	FSM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	-18	0	-11	0	multi-exon	FALSE	canonical	3	106	junction_1	21.7366509485669	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	9428	False	NA	NA	False	NA	NA	NA	3165235	3249134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
tx.8199	chr17	+	4894	20	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-26	-2	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_7	33.7657729635013	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTTCTAGGAATTGT	9413	False	NA	NA	False	NA	NA	NA	3165220	3249132	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
tx.82	chr1	-	4193	7	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	8	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.28010988928052	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTGTGAGTAAATTATT	NA	False	NA	NA	False	NA	NA	NA	17168105	17065148	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_17066741_17066787_17067114_17067687_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
tx.820	chr1	+	1735	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	-23	1	-23	-1	multi-exon	FALSE	canonical	3	419	junction_3	43.3720980457354	417	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTGTATGGTGCTGG	NA	False	NA	NA	False	NA	NA	NA	135074538	135084006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
tx.8200	chr17	+	4902	20	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	34.9116812079359	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	9413	False	NA	NA	False	NA	NA	NA	3165220	3249134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227364_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
tx.8201	chr17	+	5414	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-17	60038	combination_of_known_splicesites	FALSE	canonical	3	64	junction_20	27.9703414351702	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGCAAGTCCTTT	9422	False	NA	NA	False	NA	NA	NA	3165229	3309172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
tx.8202	chr17	-	1404	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	18	-20	-9	20	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCCCAAAGGACTGG	NA	False	NA	NA	False	NA	NA	NA	3608038	3569510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
tx.8203	chr17	+	6864	20	NNC	ENSMUSG00000069729.15	novel	1083	3	NA	NA	-21	1024	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1244426886285	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTCTTGAATGCTGT	NA	False	NA	NA	False	NA	NA	NA	5044585	5394804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_5044671_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
tx.8204	chr17	+	7349	20	FSM	ENSMUSG00000069729.15	ENSMUST00000232180.2	7309	20	974	-1014	-508	1014	multi-exon	FALSE	canonical	3	53	junction_5	8.75742660692188	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTGTGATGGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	5046187	5394794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
tx.8205	chr17	-	3089	3	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAATCCTCACTGATGA	NA	False	NA	NA	False	NA	NA	NA	5103615	5097623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_-_5100466_5102907_5103034_5103494
tx.8206	chr17	+	3835	3	ISM	ENSMUSG00000069729.15	ENSMUST00000092723.11	7150	19	341823	-1014	296184	1014	3prime_fragment	FALSE	canonical	3	55	junction_1	2	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTGTGATGGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	5387036	5394794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_5387584_5389490_5389622_5391637
tx.8207	chr17	-	962	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	-13	-1	0	1	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	226	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGCGTGTGTGTCTGT	3455	False	NA	NA	False	NA	NA	NA	5490531	5461143	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
tx.8208	chr17	+	3066	9	FSM	ENSMUSG00000034265.9	ENSMUST00000089185.6	3078	9	10	2	10	-2	multi-exon	FALSE	canonical	1	2	junction_8	5.68853012649138	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTTGTCAACAGCTT	2725	False	NA	NA	False	NA	NA	NA	5542841	5804084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765293_5775501_5775605_5777099_5777210_5781746_5781850_5802966
tx.8209	chr17	+	3009	9	NNC	ENSMUSG00000034265.9	novel	3078	9	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	4.789311015167	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTCAACAGCTTGC	2739	False	NA	NA	False	NA	NA	NA	5542855	5804086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765293_5775501_5775605_5777099_5777210_5781746_5781850_5803011
tx.821	chr1	-	1926	9	FSM	ENSMUSG00000003051.14	ENSMUST00000185752.2	1901	9	-21	-4	-21	0	multi-exon	FALSE	canonical	3	367	junction_7	94.095363860288	298	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGAGCTCTCTGTGTAC	NA	False	NA	NA	False	NA	NA	NA	135186197	135181312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
tx.8210	chr17	-	1918	2	Antisense	novelGene_ENSMUSG00000034265.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGGTGTTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	5577544	5572998	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_-_5574721_5577348
tx.8211	chr17	+	3372	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-40	-1	-40	1	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	340	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAGATTCCCAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	5891563	5982230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
tx.8212	chr17	+	3561	19	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	-125	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	75.5438103616082	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGATTCCCAAAGTATG	NA	False	NA	NA	False	NA	NA	NA	5891478	5982231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5971200_5971304_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
tx.8213	chr17	-	5517	16	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	1	1625	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	22.4376667434225	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	2594	False	NA	NA	False	NA	NA	NA	6130015	6090845	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
tx.8214	chr17	-	5629	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	2	-1624	2	1624	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTGTTCAATTCTT	2595	False	NA	NA	False	NA	NA	NA	6130014	6090846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
tx.8215	chr17	-	4133	8	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	14	19468	0	3285	5prime_fragment	FALSE	canonical	3	78	junction_3	11.8545608204141	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGGACTGTGGTGTTTT	2607	False	NA	NA	False	NA	NA	NA	6130002	6111938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
tx.8216	chr17	+	795	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	49	1401	-2	-16	multi-exon	FALSE	canonical	3	932	junction_1	74.5	198	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTGGTTAAATTATC	1739	False	NA	NA	False	NA	NA	NA	6130109	6135391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_6130187_6131076_6131150_6134746
tx.8217	chr17	+	8812	14	FSM	ENSMUSG00000034377.11	ENSMUST00000149756.8	8784	14	-26	-2	7	2	multi-exon	FALSE	canonical	0	0	junction_1	8.90581885440388	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTACATGTGTGCCAAG	NA	False	NA	NA	False	NA	NA	NA	6157139	6290905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_6157272_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6281986_6284500_6286500
tx.8218	chr17	+	6563	2	ISM	ENSMUSG00000034377.11	ENSMUST00000039655.3	9687	14	93911	6	-593	-6	3prime_fragment	FALSE	canonical	3	25	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATCAATTACATGT	NA	False	NA	NA	False	NA	NA	NA	6282333	6290897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_6284500_6286500
tx.8219	chr17	+	4458	17	FSM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	31	10	31	-10	multi-exon	TRUE	canonical	0	0	junction_14	255.117367291508	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATTTTGTATGAGACTT	NA	False	NA	NA	False	NA	NA	NA	6307165	6358579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
tx.822	chr1	-	1988	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	107	0	-23	0	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGAGCTCTCTGTGTAC	NA	False	NA	NA	False	NA	NA	NA	135186199	135181312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
tx.8220	chr17	+	5130	16	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-5	5	-5	-5	intron_retention	FALSE	canonical	0	0	junction_14	220.750195671236	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGAGACTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	6320739	6358584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
tx.8221	chr17	+	4406	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-6	5	-6	-5	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	356	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGAGACTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	6320738	6358584	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
tx.8222	chr17	+	4746	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	259.390202867707	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	6320739	6358587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
tx.8223	chr17	-	6542	2	ISM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	66	2550	-16	-2550	intron_retention	FALSE	canonical	3	7133	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6367709	6360818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_6361219_6361567
tx.8224	chr17	-	6194	3	ISM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	76	2550	-6	-2550	intron_retention	TRUE	canonical	3	7133	junction_1	391.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6367699	6360818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_6361219_6361567_6361646_6361983
tx.8225	chr17	-	711	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	60	2550	-22	-2550	multi-exon	FALSE	canonical	3	2579	junction_4	2048.76394138027	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6367715	6360818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
tx.8226	chr17	-	4483	2	NIC	ENSMUSG00000092074.3	novel	3541	4	NA	NA	-23	-2550	intron_retention	FALSE	canonical	3	2579	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6367716	6360818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_6365234_6367648
tx.8227	chr17	-	846	5	Fusion	ENSMUSG00000118494.2_ENSMUSG00000092074.3	novel	3321	5	NA	NA	85	-2550	multi-exon	FALSE	canonical	3	145	junction_4	3028.61844534765	28	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6371926	6360818	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6371724
tx.8228	chr17	+	705	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	66	0	66	0	multi-exon	TRUE	canonical	3	3024	junction_1	2440.4692555941	625	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6697576	6703695	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
tx.8229	chr17	-	4234	16	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10126	119	intron_retention	FALSE	canonical	0	0	junction_3	262.892238167826	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	2342	False	NA	NA	False	NA	NA	NA	6744547	6708463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
tx.823	chr1	-	2263	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	25	0	25	0	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	187	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	False	NA	NA	False	NA	NA	NA	135211797	135190449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
tx.8230	chr17	-	4541	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-23389	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	313.58030769645	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGAGACTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	6757810	6705929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
tx.8231	chr17	-	5181	10	ISM	ENSMUSG00000096780.8	ENSMUST00000188746.7	1626	16	16027	-2652	-1250	-8	3prime_fragment	FALSE	canonical	0	0	junction_3	296.984141406429	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	NA	False	NA	NA	NA	6718394	6705930	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836
tx.8232	chr17	-	4329	9	NIC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-1250	369	intron_retention	FALSE	canonical	0	0	junction_2	290.554211809087	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGACTCCAGGGTGGAAGA	NA	False	NA	NA	False	NA	NA	NA	6718394	6707507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836
tx.8233	chr17	-	4513	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10119	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	290.843486421391	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	2349	False	NA	NA	False	NA	NA	NA	6744540	6705924	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
tx.8234	chr17	-	4482	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10124	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	309.373535350068	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	2344	False	NA	NA	False	NA	NA	NA	6744545	6705926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716279_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
tx.8235	chr17	-	1097	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10124	-15008	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	162	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCGTGTTTCTTTTCCC	2344	False	NA	NA	False	NA	NA	NA	6744545	6723808	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
tx.8236	chr17	-	1164	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-23427	-15007	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_4	288.250758888854	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	NA	False	NA	NA	False	NA	NA	NA	6757848	6723807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
tx.8237	chr17	-	5852	2	ISM	ENSMUSG00000116560.2	ENSMUST00000231996.2	3159	6	13423	-4353	13423	4353	3prime_fragment	FALSE	canonical	3	32	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTACATGTGTGCCAAG	2761	False	NA	NA	False	NA	NA	NA	6782689	6774836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_6779304_6781304
tx.8238	chr17	+	705	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	105	1779	-16	351	multi-exon	TRUE	canonical	3	5304	junction_1	1714.27572169707	890	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6869174	6875299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
tx.8239	chr17	-	2935	3	ISM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	5672	-2331	5590	-5	3prime_fragment	TRUE	canonical	3	7908	junction_1	367	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCATGTAGCTT	NA	False	NA	NA	False	NA	NA	NA	6917627	6914005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_6916737_6917085_6917164_6917501
tx.824	chr1	-	863	5	ISM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	3907	6333	-32	270	3prime_fragment	FALSE	canonical	3	2684	junction_1	61.2632638699572	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCTTTGAAAGTTAGA	NA	False	NA	NA	False	NA	NA	NA	135237609	135229283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508
tx.8240	chr17	-	6804	2	NIC	ENSMUSG00000095677.3	novel	3545	4	NA	NA	-13	-5	intron_retention	FALSE	canonical	3	5415	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCATGTAGCTT	NA	False	NA	NA	False	NA	NA	NA	6923230	6914005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_6920752_6923172
tx.8241	chr17	-	705	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	66	0	-16	0	multi-exon	FALSE	canonical	3	5415	junction_4	1216.82506959711	328	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6923233	6916336	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
tx.8242	chr17	+	2657	16	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.5522035928561	36	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCAGCATTTATTAACAA	NA	False	NA	NA	False	NA	NA	NA	6930415	7005449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
tx.8243	chr17	+	2515	15	NNC	ENSMUSG00000041831.18	novel	1504	9	NA	NA	-397	392	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.7608486565382	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGCTCTCGGTGTGTAT	995	False	NA	NA	False	NA	NA	NA	6942922	7005835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_6943124_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
tx.8244	chr17	-	2918	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	11	235	11	-235	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	1624	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTCTGATTGCATGG	NA	False	NA	NA	False	NA	NA	NA	7050172	7005674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
tx.8245	chr17	-	1948	8	FSM	ENSMUSG00000023806.11	ENSMUST00000231794.2	2243	8	-24	319	-24	-16	multi-exon	TRUE	canonical	2	7	junction_1	24.1119836409624	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCATTTATTTAACA	NA	False	NA	NA	False	NA	NA	NA	7216105	7172130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
tx.8246	chr17	-	2581	3	ISM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	-32	0	-32	0	intron_retention	FALSE	canonical	3	411	junction_2	60	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACACACTGTTCCATTCA	NA	False	NA	NA	False	NA	NA	NA	7228587	7222409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_7224424_7225052_7225168_7228135
tx.8247	chr17	+	973	9	FSM	ENSMUSG00000094724.9	ENSMUST00000089119.13	1783	9	302	508	-10	0	multi-exon	FALSE	canonical	0	0	junction_3	237.179784130098	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGCTTTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	7246295	7265589	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
tx.8248	chr17	+	5403	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	3	0	3	0	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTGGGATAATGAG	NA	False	NA	NA	False	NA	NA	NA	7437516	7570714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
tx.8249	chr17	+	6274	4	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	31726	0	intron_retention	FALSE	canonical	3	147	junction_2	19.7371617907833	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTGGGATAATGAG	NA	False	NA	NA	False	NA	NA	NA	7559760	7570714	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_7562679_7563413_7563532_7566681_7566820_7567614
tx.825	chr1	-	906	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	41	6333	41	270	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	334	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCTTTGAAAGTTAGA	NA	False	NA	NA	False	NA	NA	NA	135241475	135229283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
tx.8250	chr17	+	1557	8	FSM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	326	306	-16	14	multi-exon	TRUE	canonical	3	57	junction_4	7.41482244134913	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACATCGTTCAAGGGCC	NA	False	NA	NA	False	NA	NA	NA	8164810	8198350	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
tx.8251	chr17	-	971	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	304	518	-8	-518	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGCTTTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	8366625	8347425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
tx.8252	chr17	+	3139	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	38	328	-1	1	multi-exon	FALSE	canonical	3	46	junction_7	116.477107908235	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	8384370	8415308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
tx.8253	chr17	+	3080	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	-2	-1	-2	1	multi-exon	TRUE	canonical	3	299	junction_6	38.250587420542	505	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	8384369	8415308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
tx.8254	chr17	+	6165	6	ISM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	13019	5	-3688	-5	3prime_fragment	FALSE	canonical	3	323	junction_1	15.3362316101447	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATTTTACAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	8397390	8415302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
tx.8255	chr17	+	928	4	NIC	ENSMUSG00000023861.18	novel	958	5	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	472.094858641307	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGTGTGACTATATAT	2147	False	NA	NA	False	NA	NA	NA	8502619	8516493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
tx.8256	chr17	+	5023	3	FSM	ENSMUSG00000023861.18	ENSMUST00000137344.2	670	3	-3842	-511	-3842	0	multi-exon	FALSE	canonical	3	944	junction_1	57.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGTGTGACTATATAT	4753	False	NA	NA	False	NA	NA	NA	8511097	8516493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_8515464_8515655_8515789_8515969
tx.8257	chr17	+	1031	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	18	0	-2	0	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2941	False	NA	NA	False	NA	NA	NA	8529951	8546274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
tx.8258	chr17	+	840	6	FSM	ENSMUSG00000073468.13	ENSMUST00000145276.8	810	6	-28	-2	2	0	multi-exon	FALSE	canonical	3	190	junction_1	242.374586126516	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2962	False	NA	NA	False	NA	NA	NA	8529972	8546274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_8530118_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
tx.8259	chr17	+	3574	6	NIC	ENSMUSG00000073468.13	novel	2490	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	775	junction_5	42.1872018507983	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2957	False	NA	NA	False	NA	NA	NA	8529967	8546274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8542168_8543265_8543296_8545786
tx.826	chr1	-	1915	3	FSM	ENSMUSG00000041889.8	ENSMUST00000159918.2	1404	3	-512	1	-512	-1	multi-exon	FALSE	canonical	3	26	junction_2	3.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTATGAGTCCGTCCTT	NA	False	NA	NA	False	NA	NA	NA	135301700	135298798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_135299735_135299934_135300103_135300889
tx.8260	chr17	+	2773	7	FSM	ENSMUSG00000062327.11	ENSMUST00000177118.2	761	7	-1264	-748	-276	-6	multi-exon	FALSE	canonical	3	13	junction_4	10.7496769977314	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTTTGTGGATTAT	NA	False	NA	NA	False	NA	NA	NA	8652978	8661322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
tx.8261	chr17	+	2194	8	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-150	-5	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	9.95295054191449	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	NA	False	NA	NA	NA	8653104	8661323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
tx.8262	chr17	+	2191	8	FSM	ENSMUSG00000062327.11	ENSMUST00000074667.9	2046	8	-150	5	-150	-5	multi-exon	FALSE	canonical	3	22	junction_5	7.70634511957782	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	NA	False	NA	NA	NA	8653104	8661323	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
tx.8263	chr17	+	4053	22	FSM	ENSMUSG00000023868.18	ENSMUST00000089085.10	7769	22	-476	4192	-476	-40	multi-exon	FALSE	canonical	1	1	junction_6	1.87476377952662	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCACTGTATGTTATG	NA	False	NA	NA	False	NA	NA	NA	9020048	9201288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_9020978_9117692_9117822_9139335_9139365_9147923_9148045_9149341_9149392_9159972_9160114_9161703_9161860_9163201_9163253_9163767_9163827_9165627_9165680_9168181_9168325_9170328_9170422_9172568_9172756_9180691_9180835_9181719_9181804_9183396_9183548_9186250_9186407_9188359_9188533_9193554_9193667_9195967_9196049_9197736_9197826_9200364
tx.8264	chr17	-	3959	4	Fusion	ENSMUSG00000117341.2_ENSMUSG00000046173.4	novel	588	4	NA	NA	-6	-3	multi-exon	FALSE	canonical	1	2	junction_1	4.02768199119819	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTTTGTGGTTCA	NA	False	NA	NA	False	NA	NA	NA	9945296	9885426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_-_9888971_9924446_9924688_9941118_9941218_9945221
tx.8265	chr17	-	4567	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	27	3953	8	-3	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	2022	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTGGACTATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	10538282	10425482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
tx.8266	chr17	-	4542	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	389.553590665007	112	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACTCTGGACTATGTTTG	NA	False	NA	NA	False	NA	NA	NA	10538282	10425483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
tx.8267	chr17	-	5426	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	8	-6	8	-4	multi-exon	FALSE	canonical	3	312	junction_1	334.742396810177	461	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGTTTGGCCCAGA	NA	False	NA	NA	False	NA	NA	NA	10538282	10429111	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
tx.8268	chr17	+	1902	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	9	4	9	-4	multi-exon	FALSE	canonical	3	218	junction_3	26.473748790075	232	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	NA	False	NA	NA	NA	12338179	12438528	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
tx.8269	chr17	-	5278	26	FSM	ENSMUSG00000014426.10	ENSMUST00000233755.2	5237	26	-44	3	4	-3	multi-exon	FALSE	canonical	2	41	junction_10	48.1782357501808	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCAGCGTCTGTTACTG	NA	False	NA	NA	False	NA	NA	NA	12537679	12446510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
tx.827	chr1	-	1599	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	161	3	1	0	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGAGTCCGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	135302814	135298797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
tx.8270	chr17	-	4788	25	ISM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	46735	4	-6075	-4	3prime_fragment	FALSE	canonical	3	136	junction_19	34.6333974975344	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTCAGCGTCTGTTACT	NA	False	NA	NA	False	NA	NA	NA	12490948	12446511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749
tx.8271	chr17	-	5435	27	FSM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	3	3	3	-3	multi-exon	FALSE	canonical	2	131	junction_25	36.3765644044325	209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCAGCGTCTGTTACTG	NA	False	NA	NA	False	NA	NA	NA	12537680	12446510	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
tx.8272	chr17	-	4266	24	ISM	ENSMUSG00000014426.10	ENSMUST00000233755.2	5237	26	47052	5	-5710	-5	3prime_fragment	FALSE	canonical	3	41	junction_10	48.0548678217	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGTCAGCGTCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	12490583	12446512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749
tx.8273	chr17	-	5963	28	ISM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	58936	5	-9449	-5	3prime_fragment	FALSE	canonical	3	128	junction_23	34.7733401499653	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	NA	False	NA	NA	False	NA	NA	NA	12929615	12901297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523
tx.8274	chr17	-	4052	15	ISM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	71352	5	2967	-5	3prime_fragment	TRUE	canonical	3	174	junction_10	26.4868084224612	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	NA	False	NA	NA	False	NA	NA	NA	12917199	12901297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972
tx.8275	chr17	-	8933	48	FSM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	-51	5	-51	-5	multi-exon	FALSE	canonical	3	127	junction_32	38.5858675109275	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	5567	False	NA	NA	False	NA	NA	NA	12988602	12901297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
tx.8276	chr17	-	1805	19	FSM	ENSMUSG00000073460.6	ENSMUST00000163394.3	2092	19	287	0	3	0	multi-exon	TRUE	canonical	3	109	junction_10	13.5984067694222	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2977	False	NA	NA	False	NA	NA	NA	13128830	13107615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
tx.8277	chr17	-	1064	3	ISM	ENSMUSG00000073460.6	ENSMUST00000232982.2	620	8	-30	8082	23	-8082	5prime_fragment	FALSE	canonical	3	130	junction_1	2	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTAGTGTCCTAAATAA	2997	False	NA	NA	False	NA	NA	NA	13128810	13127095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_13128014_13128348_13128407_13128722
tx.8278	chr17	-	1238	4	NNC	ENSMUSG00000057388.10	novel	1219	4	NA	NA	-463	4	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_3	475.563759015433	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTACTGTGTTGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	13135695	13130231	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_13130637_13132656_13132889_13134524_13134712_13135281
tx.8279	chr17	-	988	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	233	-2	-9	2	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	406	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTACTGTGTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	13134999	13130233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
tx.828	chr1	-	4160	25	FSM	ENSMUSG00000041879.14	ENSMUST00000161189.8	4189	25	29	0	-4	0	multi-exon	TRUE	canonical	0	0	junction_23	161.892405756622	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	NA	False	NA	NA	NA	135358200	135312210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
tx.8280	chr17	-	2653	3	NIC	ENSMUSG00000057388.10	novel	1219	4	NA	NA	-38	2	intron_retention	FALSE	canonical	3	1056	junction_2	5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTACTGTGTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	13135028	13130233	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_13130637_13132656_13134712_13134833
tx.8281	chr17	+	1918	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	19	509	19	2	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	3582	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTTCCTGTCCTCA	NA	False	NA	NA	False	NA	NA	NA	13135287	13143445	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
tx.8282	chr17	-	2085	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	15	150	-12	-2	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	995	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCTTGTCAGTGAG	NA	False	NA	NA	False	NA	NA	NA	13179619	13161926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
tx.8283	chr17	-	3752	8	NNC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	-60	0	intron_retention	FALSE	canonical	3	65	junction_2	238.239889392938	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	13211493	13185685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
tx.8284	chr17	-	7767	7	NIC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	20	0	intron_retention	FALSE	canonical	3	178	junction_2	177.968786276945	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	13211126	13185685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_13186939_13188291_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
tx.8285	chr17	-	3608	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	29	0	intron_retention	FALSE	canonical	3	65	junction_2	221.334265632001	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	13211117	13185685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
tx.8286	chr17	-	2028	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	23	0	23	0	multi-exon	FALSE	canonical	3	178	junction_3	195.055094257798	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	13211123	13185685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
tx.8287	chr17	-	2589	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	21	0	intron_retention	FALSE	canonical	3	13	junction_2	233.876559103214	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	13211125	13185685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_13186939_13188291_13188447_13193623_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
tx.8288	chr17	-	2152	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	-95	3	-46	0	multi-exon	FALSE	canonical	3	121	junction_7	218.990354833733	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	13211479	13185685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
tx.8289	chr17	-	2475	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	-46	13	-46	-13	multi-exon	FALSE	canonical	3	121	junction_5	236.32384560175	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTTTATTGTGACAAAAT	NA	False	NA	NA	False	NA	NA	NA	13211479	13192451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
tx.829	chr1	-	4056	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	30	2161	-11	0	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	668	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	NA	False	NA	NA	NA	135358207	135312210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
tx.8290	chr17	-	1655	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-49	1581	18	-714	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTTTTTTTAATTCA	NA	False	NA	NA	False	NA	NA	NA	13211128	13193152	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
tx.8291	chr17	+	3722	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	122	2017	-57	-2017	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	1446	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGGTATGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	13226825	13237004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
tx.8292	chr17	+	3595	4	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	357	2024	-10	-2024	3prime_fragment	FALSE	canonical	3	3082	junction_3	122.60052564687	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTATCCAGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	13227060	13236997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_13227274_13229406_13229524_13232319_13232500_13233912
tx.8293	chr17	-	2728	10	NNC	ENSMUSG00000067049.9	novel	2643	10	NA	NA	-11825	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.99382239013587	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACGTCTTGCCCAAATAT	NA	False	NA	NA	False	NA	NA	NA	13362522	13327503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_13328741_13334386_13334519_13335065_13335202_13336506_13336725_13339647_13339774_13341630_13341861_13342156_13342339_13344453_13344599_13344823_13344878_13362254
tx.8294	chr17	+	2391	2	Fusion	ENSMUSG00000060417.7_ENSMUSG00000090211.4	novel	2463	3	NA	NA	12	761	multi-exon	FALSE	canonical	0	0	junction_1	0	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGAGGTTTTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	13721227	13739292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_+_13721317_13736990
tx.8295	chr17	+	1961	3	Fusion	ENSMUSG00000060417.7_ENSMUSG00000090211.4	novel	2463	3	NA	NA	11	757	multi-exon	FALSE	canonical	0	0	junction_1	6	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCTCGGAGGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	13721226	13739288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_+_13721317_13736990_13738577_13739003
tx.8296	chr17	+	7364	32	FSM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	-158	-1788	-23	0	multi-exon	FALSE	canonical	1	133	junction_20	64.7559574638129	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	13980777	14126057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
tx.8297	chr17	+	7369	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	63.9601365185812	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	13980775	14126057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
tx.8298	chr17	+	7366	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	70.780765419582	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	13980775	14126057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
tx.8299	chr17	+	7366	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	71.4884853524067	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	13980772	14126057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
tx.83	chr1	-	4773	6	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.29285308902091	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGTGTCTTTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	17168124	17065161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_17066741_17066787_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
tx.830	chr1	-	9531	28	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	133	848	combination_of_known_junctions	TRUE	canonical	3	28	junction_27	14.6067800932087	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCATTTTGTGCCGTGT	NA	False	NA	NA	False	NA	NA	NA	135513310	135365737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292
tx.8300	chr17	-	2749	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	323	178	323	-178	multi-exon	FALSE	canonical	3	62	junction_2	0.816496580927726	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTTGTCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	14424033	14415491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
tx.8301	chr17	-	5752	22	FSM	ENSMUSG00000023885.10	ENSMUST00000170872.3	5895	22	144	-1	144	1	multi-exon	FALSE	canonical	0	0	junction_8	0.843811673650921	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTCTCTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	14914353	14885760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988_14910546_14911624_14911774_14914231
tx.8302	chr17	+	2557	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	-32	-2	14	0	multi-exon	FALSE	canonical	3	15	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTGCTGTTACTTTA	NA	False	NA	NA	False	NA	NA	NA	15163459	15166198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_15163582_15163763
tx.8303	chr17	+	2464	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	42	0	-4	0	multi-exon	FALSE	canonical	3	37	junction_1	0	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTGCTGTTACTTTA	NA	False	NA	NA	False	NA	NA	NA	15163487	15166198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_15163582_15163828
tx.8304	chr17	-	1984	12	FSM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-319	-2	-319	2	multi-exon	FALSE	canonical	3	756	junction_1	72.874056420468	727	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGACCTTAAACATCAAG	NA	False	NA	NA	False	NA	NA	NA	15181854	15165268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
tx.8305	chr17	-	4051	9	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-38	2727	-38	2	5prime_fragment	FALSE	canonical	3	797	junction_6	66.6966078597705	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	NA	False	NA	NA	False	NA	NA	NA	15181573	15167997	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
tx.8306	chr17	+	1525	11	ISM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	404	1495	-5	-1	5prime_fragment	FALSE	canonical	0	0	junction_7	77.0690599397709	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATTAATGTTTTGGCCC	NA	False	NA	NA	False	NA	NA	NA	15199133	15209672	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159
tx.8307	chr17	-	712	3	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	20	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAACGGGTTCTTTGGAAG	NA	False	NA	NA	False	NA	NA	NA	15213156	15201657	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_-_15202006_15208649_15208854_15212996
tx.8308	chr17	-	1356	2	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCATTCTGTTCTGTTCG	NA	False	NA	NA	False	NA	NA	NA	15244519	15242836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_15244038_15244364
tx.8309	chr17	-	712	3	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	20	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTTTGGAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	15213151	15201652	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_-_15202006_15208649_15208854_15212996
tx.831	chr1	-	10060	31	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-57	503	combination_of_known_junctions	TRUE	canonical	3	17	junction_28	16.8865495455867	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCTGATGTCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	135615900	135366082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
tx.8310	chr17	-	1337	2	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTCTGTTCTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	15244498	15242834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_15244038_15244364
tx.8311	chr17	+	4779	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.9965122338786	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAACTCTATGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	15261876	15284487	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
tx.8312	chr17	+	2525	18	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	59.4887678037601	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAACTCTATGTTGCC	NA	False	NA	NA	False	NA	NA	NA	15261875	15284486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
tx.8313	chr17	+	1711	2	Antisense	novelGene_ENSMUSG00000097624.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTCATTCATTGTAA	NA	False	NA	NA	False	NA	NA	NA	15461224	15463990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_+_15461391_15462445
tx.8314	chr17	-	3579	11	FSM	ENSMUSG00000014773.14	ENSMUST00000014917.8	3581	11	2	0	2	0	multi-exon	FALSE	canonical	2	3	junction_7	1.34536240470737	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTGTGACTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	15596236	15587615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_15588298_15588395_15588514_15588628_15589428_15590468_15590686_15590792_15590963_15591084_15591216_15591867_15591929_15593698_15593957_15594151_15594213_15594927_15595222_15595448
tx.8315	chr17	+	2671	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	65	29317	19	-4732	5prime_fragment	FALSE	canonical	3	53	junction_1	0	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTGTTTTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	15616528	15624383	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_15616823_15622006
tx.8316	chr17	+	2953	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	69	1398	23	-1398	multi-exon	TRUE	canonical	2	12	junction_2	12.6526677028997	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAGTCTTTGAACTCA	NA	False	NA	NA	False	NA	NA	NA	15616532	15652302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
tx.8317	chr17	-	819	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	1	938	1	0	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	1463	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	NA	False	NA	NA	NA	15718559	15696220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
tx.8318	chr17	-	4432	5	ISM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	17	938	17	0	intron_retention	FALSE	canonical	3	4315	junction_4	325.377088929138	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	NA	False	NA	NA	NA	15718543	15696220	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677
tx.8319	chr17	+	3118	8	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	3	-14	intron_retention	FALSE	canonical	3	87	junction_1	85.9499142239365	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAGACCATTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	15720192	15737675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
tx.832	chr1	-	7081	23	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-3316	503	combination_of_known_junctions	FALSE	canonical	3	42	junction_19	13.6814406471621	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCTGATGTCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	135398727	135366082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217
tx.8320	chr17	+	1897	10	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	107.763229258625	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTGTTTGCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	15720186	15737686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_15720287_15721415_15721465_15721573_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
tx.8321	chr17	+	1802	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	36	10956	2	-4	multi-exon	TRUE	canonical	3	150	junction_1	66.6565978791022	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTGTTTGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	15720185	15737685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
tx.8322	chr17	+	1851	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	37	3	3	-3	multi-exon	FALSE	canonical	3	123	junction_2	77.8728932299295	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTGTTTGCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	15720186	15737686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
tx.8323	chr17	-	1113	6	FSM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	3	4	3	-4	multi-exon	FALSE	canonical	3	811	junction_3	58.5409258553364	317	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCCTCAGTACCTCAT	NA	False	NA	NA	False	NA	NA	NA	15747560	15741840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252
tx.8324	chr17	+	4942	24	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-4	16476	-4	786	5prime_fragment	FALSE	canonical	3	287	junction_10	32.2930227676305	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTCTATTGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	15925224	15976396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182
tx.8325	chr17	+	7934	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-22	4	-22	-4	multi-exon	TRUE	canonical	3	278	junction_29	37.9898375240279	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAATGGCTTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	15925206	15992868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
tx.8326	chr17	-	4212	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	6	1480	6	-179	multi-exon	FALSE	canonical	3	46	junction_1	3.5	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGATGTTTGTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	16046842	16024929	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_16028064_16040931_16041441_16046273
tx.8327	chr17	+	2713	4	FSM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	-50	4	-50	-4	multi-exon	FALSE	canonical	3	176	junction_3	31.9826341768293	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGGGATGCAACATA	NA	False	NA	NA	False	NA	NA	NA	17284324	17309886	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505
tx.8328	chr17	+	2317	4	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	284	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCCAAGTATGCTGCT	NA	False	NA	NA	False	NA	NA	NA	17399554	17426649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
tx.8329	chr17	+	2474	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	-3	-277	-3	277	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCCAAGTATGCTGCTC	6221	False	NA	NA	False	NA	NA	NA	17455130	17486602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
tx.833	chr1	-	5407	26	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-20	-1990	combination_of_known_junctions	FALSE	canonical	2	3	junction_25	17.2810184885035	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTCTATTTTTTCC	3345	False	NA	NA	False	NA	NA	NA	135438142	135368575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135437941
tx.8330	chr17	+	2258	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	-33	-1699	-33	292	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTGCTCTTTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	17514671	17540065	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
tx.8331	chr17	+	2032	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	257	931	-6	-931	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	369	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATCTGTAGTTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	17594827	17614230	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
tx.8332	chr17	-	5703	18	FSM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	41	6308	41	-653	multi-exon	FALSE	canonical	3	25	junction_8	4.93557105021248	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTGAATATTTGTGGT	9934	False	NA	NA	False	NA	NA	NA	17845268	17747979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
tx.8333	chr17	+	2276	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	123	11	-53	0	multi-exon	FALSE	canonical	3	1213	junction_1	77.3781135010385	2171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTCTCTAGTCTTAGT	NA	False	NA	NA	False	NA	NA	NA	21165695	21186167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
tx.8334	chr17	+	2053	5	NIC	ENSMUSG00000067942.7	novel	2087	6	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	20.5836707124847	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCACATAAGTTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	21229171	21263307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21261684
tx.8335	chr17	+	3784	5	FSM	ENSMUSG00000067942.7	ENSMUST00000088811.7	3800	5	12	4	2	-4	multi-exon	FALSE	canonical	3	20	junction_1	17.6405073623181	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTTTTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	21229214	21249119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21245722
tx.8336	chr17	+	3895	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232354.2	1041	5	13	-2867	7	-4	multi-exon	FALSE	canonical	3	24	junction_4	15.2807067899361	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTTTTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	21229225	21249119	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21245722
tx.8337	chr17	+	2926	4	FSM	ENSMUSG00000062743.10	ENSMUST00000162659.2	2917	4	-9	0	-9	0	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGGTTTTGTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	21604000	21619527	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21604283_21612722_21612814_21613437_21613565_21617101
tx.8338	chr17	+	2048	4	FSM	ENSMUSG00000023882.16	ENSMUST00000167749.2	822	4	-14	-1212	11	3	multi-exon	FALSE	canonical	3	11	junction_1	10.1980390271856	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTTTTGTTTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21643505	21655419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21643580_21647998_21648091_21650456_21650584_21653664
tx.8339	chr17	+	2292	4	FSM	ENSMUSG00000023882.16	ENSMUST00000007884.15	2300	4	12	-4	12	4	multi-exon	FALSE	canonical	2	3	junction_1	13.8884444373331	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTTGTTTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21643506	21655420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21643824_21647998_21648091_21650456_21650584_21653664
tx.834	chr1	-	1372	7	ISM	ENSMUSG00000009418.17	ENSMUST00000040599.15	12767	30	132900	6853	1452	-2585	3prime_fragment	FALSE	canonical	3	62	junction_2	9.54666899441312	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAGATGATTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	135380193	135369170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909
tx.8340	chr17	+	2574	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	4	-4	4	4	multi-exon	FALSE	canonical	3	80	junction_1	22.3271135617661	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTCTCTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	21670639	21685853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
tx.8341	chr17	+	2533	4	ISM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	2060	-4	2060	4	3prime_fragment	FALSE	canonical	3	124	junction_2	4.78423336480244	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTCTCTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	21672695	21685853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_21672790_21676558_21676651_21681922_21682050_21683633
tx.8342	chr17	+	3588	6	Fusion	ENSMUSG00000117037.2_ENSMUSG00000057409.8	novel	3065	5	NA	NA	-20	2187	multi-exon	FALSE	canonical	3	7	junction_3	73.6787622045865	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGCCTGAGTCTTTCAT	1455	False	NA	NA	False	NA	NA	NA	21709239	21753444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21742853_21742938_21748201_21748329_21750538
tx.8343	chr17	+	2414	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-15	666	-15	43	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTGTGGAAAAAGCTTT	1460	False	NA	NA	False	NA	NA	NA	21709244	21730069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
tx.8344	chr17	+	5279	4	ISM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-11	676	-11	33	intron_retention	FALSE	canonical	3	156	junction_2	2.49443825784929	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATTATAACTGTGG	1464	False	NA	NA	False	NA	NA	NA	21709248	21730059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242
tx.8345	chr17	+	794	5	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	-2	-2211	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	24.0572234474388	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTGTCTGAACAGTAAT	1473	False	NA	NA	False	NA	NA	NA	21709257	21727815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21727601
tx.8346	chr17	+	2683	6	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	38.4010416525385	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21787271	21808961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_21787508_21789277_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
tx.8347	chr17	+	2654	6	FSM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	80	junction_2	15.6025638918737	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21787267	21808961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
tx.8348	chr17	+	5519	4	ISM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	3665	0	3665	0	3prime_fragment	FALSE	canonical	3	87	junction_1	15.7691682300198	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21790934	21808961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_21794219_21803291_21803405_21805041_21805169_21806966
tx.8349	chr17	+	2984	5	Genic_Genomic	ENSMUSG00000073448.4_ENSMUSG00000067929.4	novel	842	1	NA	NA	-10192	561	multi-exon	FALSE	canonical	3	30	junction_1	5.44862367942584	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGTGAGCACCATTT	NA	False	NA	NA	False	NA	NA	NA	21898895	21911582	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr17_+_21899118_21900505_21900595_21904941_21905026_21906708_21906836_21909120
tx.835	chr1	+	1458	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	-25	2	-25	-2	multi-exon	FALSE	canonical	3	639	junction_1	0	565	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTCTACTGAGTGAAAT	6720	False	NA	NA	False	NA	NA	NA	135693831	135696872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_135694633_135696215
tx.8350	chr17	+	2898	5	Genic_Genomic	ENSMUSG00000073448.4_ENSMUSG00000067929.4	novel	842	1	NA	NA	-10186	559	multi-exon	FALSE	canonical	2	5	junction_1	14.790199457749	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTTGTGAGCACCAT	NA	False	NA	NA	False	NA	NA	NA	21898901	21911580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr17_+_21899040_21900505_21900595_21904941_21905026_21906708_21906836_21909120
tx.8351	chr17	+	5199	5	ISM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-74	1	-74	-1	intron_retention	FALSE	canonical	3	47	junction_2	7.1239034243875	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTGGAAATTCAATGA	NA	False	NA	NA	False	NA	NA	NA	21926648	21944616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924
tx.8352	chr17	+	4282	6	FSM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-74	1	-74	-1	multi-exon	FALSE	canonical	3	33	junction_5	11.689311356962	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTGGAAATTCAATGA	NA	False	NA	NA	False	NA	NA	NA	21926648	21944616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940968
tx.8353	chr17	+	4642	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-95	-3907	-95	0	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	299	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGACTTGTATCATAG	NA	False	NA	NA	False	NA	NA	NA	21949680	21967949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
tx.8354	chr17	+	4570	6	FSM	ENSMUSG00000061544.14	ENSMUST00000065871.14	4525	6	-46	1	-2	-1	multi-exon	FALSE	canonical	3	15	junction_1	72.3756865252413	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGGACTTGTATCATA	NA	False	NA	NA	False	NA	NA	NA	21952658	21967948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_21952940_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
tx.8355	chr17	-	3704	5	FSM	ENSMUSG00000069743.6	ENSMUST00000084141.6	3686	5	-7	-11	6	11	multi-exon	TRUE	canonical	3	21	junction_3	11.3880419739304	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	NA	False	NA	NA	NA	22064747	22035854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624
tx.8356	chr17	-	2662	5	FSM	ENSMUSG00000078546.9	ENSMUST00000190066.7	2221	5	222	-663	-65	663	multi-exon	TRUE	canonical	2	10	junction_1	2.29128784747792	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTTGTTTCCATTTTCC	NA	False	NA	NA	False	NA	NA	NA	22128685	22097887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_22100076_22100938_22101066_22106291_22106340_22127029_22127178_22128534
tx.8357	chr17	-	6613	3	FSM	ENSMUSG00000071267.12	ENSMUST00000074295.8	1461	3	-3929	-1223	-3929	-3	multi-exon	TRUE	canonical	3	71	junction_1	7.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22155932	22145943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_22148471_22149346_22149474_22151973
tx.8358	chr17	-	3247	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-24	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	26.7776025812618	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGGACTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	22181469	22145944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22173035_22181236
tx.8359	chr17	-	3300	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	-38	3	-25	-3	multi-exon	FALSE	canonical	3	43	junction_3	17.9041894538681	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181470	22145943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
tx.836	chr1	+	1251	5	ISM	ENSMUSG00000026418.17	ENSMUST00000148201.8	1150	9	5297	4	73	-4	3prime_fragment	FALSE	canonical	3	46	junction_1	20.1912728672563	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAATGGTTTCTGTAGCC	3644	False	NA	NA	False	NA	NA	NA	135732867	135738723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
tx.8360	chr17	-	3226	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-24	-3	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_5	22.8508205541945	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181469	22145943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172962_22181236
tx.8361	chr17	+	2779	4	FSM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	-41	3	-41	-3	multi-exon	TRUE	canonical	3	11	junction_3	5.73488351136175	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181491	22213344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_22181801_22207011_22207083_22209759_22209887_22211072
tx.8362	chr17	-	2964	4	NNC	ENSMUSG00000117234.2	novel	1756	2	NA	NA	-11653	618	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1.69967317119759	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCTTGGCTGTTTCCA	NA	False	NA	NA	False	NA	NA	NA	22300522	22285626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22287883_22288751_22288879_22297569_22297618_22299989
tx.8363	chr17	-	2702	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	171	-1	171	1	multi-exon	FALSE	canonical	3	22	junction_1	1.11803398874989	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGCTGTTTCCATTT	NA	False	NA	NA	False	NA	NA	NA	22385000	22363338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
tx.8364	chr17	-	4916	5	FSM	ENSMUSG00000096433.3	ENSMUST00000179996.3	4882	5	-31	-3	-31	3	multi-exon	TRUE	canonical	2	8	junction_3	10.6066017177982	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGAGTCCTTCAGCAA	NA	False	NA	NA	False	NA	NA	NA	22444628	22416242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_22420791_22421656_22421784_22424285_22424334_22442991_22443076_22444519
tx.8365	chr17	-	4844	4	NIC	ENSMUSG00000096433.3	novel	4882	5	NA	NA	-44	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	4.18993502999218	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTGAGTCCTTCAGCA	NA	False	NA	NA	False	NA	NA	NA	22444641	22416243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_22420791_22421656_22421784_22424285_22424334_22444519
tx.8366	chr17	-	3485	6	FSM	ENSMUSG00000117284.2	ENSMUST00000233465.2	3474	6	-13	2	-13	-2	multi-exon	FALSE	canonical	2	21	junction_5	14.9853261559434	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTGTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	22533831	22504853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217_22532302_22533727
tx.8367	chr17	-	3607	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_6	14.4501057281791	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533841	22504851	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22532217_22532302_22533727
tx.8368	chr17	-	2714	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	20.2484567313166	56	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGTTGTTTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	22580380	22556965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578420_22578506_22580148
tx.8369	chr17	-	5267	5	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-8	2	intron_retention	FALSE	canonical	3	53	junction_2	18.6329680942141	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTGGTTGTTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	22580389	22556967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22559089_22559947_22562675_22577803_22577897_22578420_22578506_22580148
tx.837	chr1	+	2482	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	137	374	137	261	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGTAATGTCGATGG	5755	False	NA	NA	False	NA	NA	NA	135746472	135760706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
tx.8370	chr17	-	2779	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-9	5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	35.1946965701747	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTGTTTTCAGTTTC	NA	False	NA	NA	False	NA	NA	NA	22580390	22556964	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22574061_22574116_22577803_22577897_22578420_22578506_22580148
tx.8371	chr17	-	2786	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	0	-2	0	2	multi-exon	FALSE	canonical	3	51	junction_4	24.8997991959775	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTGGTTGTTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	22580381	22556967	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
tx.8372	chr17	-	6188	4	NIC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	51	junction_2	21.2289111041209	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580380	22556969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_22562675_22577803_22577970_22578420_22578506_22580148
tx.8373	chr17	+	4418	4	FSM	ENSMUSG00000044501.18	ENSMUST00000088765.9	2973	4	9	-1454	7	1453	multi-exon	FALSE	canonical	3	11	junction_1	13.4412301024373	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGACATTACCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	22580442	22597715	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_22580689_22590971_22591070_22592623_22592751_22593768
tx.8374	chr17	+	2990	7	FSM	ENSMUSG00000071266.14	ENSMUST00000088763.13	2935	7	-61	6	-15	-6	multi-exon	FALSE	canonical	3	18	junction_4	23.5849528301415	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGACTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	22643187	22675664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670059_22670134_22672432_22672560_22673404
tx.8375	chr17	+	2974	7	FSM	ENSMUSG00000071266.14	ENSMUST00000120222.8	2926	7	-51	3	-14	-3	multi-exon	FALSE	canonical	3	27	junction_4	20.6881608655772	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACTTGGTTGTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	22643188	22675667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22672432_22672560_22673404
tx.8376	chr17	+	3036	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13391	1030	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.17537465175128	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGCATCAGTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	22893309	22910471	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_22893506_22905311_22905368_22906456_22906513_22906703_22906831_22907870
tx.8377	chr17	+	3060	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13391	1036	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	3.26917420765551	20	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCAGTTTTTAGTGGAAC	NA	False	NA	NA	False	NA	NA	NA	22893309	22910477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_22893506_22905293_22905368_22906456_22906513_22906703_22906831_22907870
tx.8378	chr17	-	6060	4	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22979	3351	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_3	5.43650214343336	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAGTTTGCTTACTGA	NA	False	NA	NA	False	NA	NA	NA	22958897	22929411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22958635
tx.8379	chr17	-	5711	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	-29	1	0	-1	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTGCCTGTTTGATG	NA	False	NA	NA	False	NA	NA	NA	23086108	23066456	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
tx.838	chr1	+	1443	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	49	314	-46	248	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCAGATCTCAAGGGA	NA	False	NA	NA	False	NA	NA	NA	135945753	135962766	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
tx.8380	chr17	-	5288	6	FSM	ENSMUSG00000059142.17	ENSMUST00000160457.10	6618	6	-178	1508	-178	-723	multi-exon	FALSE	canonical	1	1	junction_3	13.6528385327008	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACGTGTCCCAGGTGTGC	NA	False	NA	NA	False	NA	NA	NA	23086286	23067178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23080705_23080827_23084220_23084311_23085954
tx.8381	chr17	-	4097	6	FSM	ENSMUSG00000002617.15	ENSMUST00000037057.14	4103	6	4	2	3	-2	multi-exon	FALSE	canonical	3	8	junction_3	2.41660919471891	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTGTAAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	23412222	23392844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23396339_23397248_23397376_23401121_23401207_23410318_23410410_23410650_23410777_23412048
tx.8382	chr17	-	2812	6	NNC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	16.80476123008	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCTTTAGCTGGC	6761	False	NA	NA	False	NA	NA	NA	23783135	23775740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782739
tx.8383	chr17	-	2670	6	FSM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	16	0	16	0	multi-exon	FALSE	canonical	3	33	junction_4	6.49923072370877	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCTTTAGCTGGC	6700	False	NA	NA	False	NA	NA	NA	23783196	23775740	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782942
tx.8384	chr17	-	2467	6	NIC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-4	380	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	27.6579102609	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTATTATTGTGGTTG	4819	False	NA	NA	False	NA	NA	NA	23805210	23794437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23804934
tx.8385	chr17	-	2500	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-4	-392	-4	392	multi-exon	TRUE	canonical	3	79	junction_1	5.98665181883831	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTGTTGTTGGTATCT	4819	False	NA	NA	False	NA	NA	NA	23805210	23794425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
tx.8386	chr17	+	2709	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	-4	-7	-4	0	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	875	False	NA	NA	False	NA	NA	NA	23819825	23829993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
tx.8387	chr17	+	4002	3	ISM	ENSMUSG00000023902.19	ENSMUST00000133749.2	548	4	-2036	-1322	-27	0	intron_retention	FALSE	canonical	3	281	junction_2	0.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	1930	False	NA	NA	False	NA	NA	NA	23824427	23829993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_23826619_23827081_23827140_23828240
tx.8388	chr17	-	1513	13	FSM	ENSMUSG00000041319.15	ENSMUST00000047436.11	1504	13	-9	0	-9	0	multi-exon	TRUE	canonical	3	423	junction_10	38.5186643070603	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	785	False	NA	NA	False	NA	NA	NA	23892825	23887591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
tx.8389	chr17	-	1438	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	12	0	1	0	multi-exon	FALSE	canonical	3	160	junction_13	93.5049281997111	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	766	False	NA	NA	False	NA	NA	NA	23892844	23887591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
tx.839	chr1	+	9072	34	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_27	14.2043333317495	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGTGGCTAGTGGG	6176	False	NA	NA	False	NA	NA	NA	136059128	136105734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
tx.8390	chr17	-	1427	14	FSM	ENSMUSG00000041319.15	ENSMUST00000115490.9	1431	14	5	-1	5	0	multi-exon	FALSE	canonical	3	69	junction_13	116.170706876108	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	770	False	NA	NA	False	NA	NA	NA	23892840	23887591	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
tx.8391	chr17	+	860	4	NNC	ENSMUSG00000023904.11	novel	597	4	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTCTCAGCAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	23892575	23894199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
tx.8392	chr17	+	621	3	ISM	ENSMUSG00000023904.11	ENSMUST00000179928.2	597	4	292	-51	292	-2	3prime_fragment	FALSE	canonical	3	343	junction_1	29	45	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTCTCAGCAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	23892892	23894199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_23893043_23893520_23893650_23893857
tx.8393	chr17	-	990	4	FSM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	66	junction_1	6.34209919681348	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGCCTGATCCCTAAC	NA	False	NA	NA	False	NA	NA	NA	23896448	23894418	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23895021_23895112_23895248_23895492_23895598_23896300
tx.8394	chr17	+	1958	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	87	-5	-46	0	multi-exon	TRUE	canonical	3	384	junction_2	52.6761379583211	391	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3025	False	NA	NA	False	NA	NA	NA	23945396	23955709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
tx.8395	chr17	+	1546	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_3	138.628412436607	55	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3036	False	NA	NA	False	NA	NA	NA	23945407	23955709	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
tx.8396	chr17	-	2570	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	2	3	2	-3	multi-exon	FALSE	canonical	3	32	junction_1	3.5	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCCGCCTGACCACATT	NA	False	NA	NA	False	NA	NA	NA	23959370	23955162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23956974_23957113_23957336_23958833
tx.8397	chr17	-	3421	9	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	31	-6	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	43.4667617266343	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGCTGCTGTGTGTCA	7556	False	NA	NA	False	NA	NA	NA	23990545	23971772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
tx.8398	chr17	-	3324	8	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	31	-5	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	24.7831410768016	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCTGCTGTGTGTCAG	7556	False	NA	NA	False	NA	NA	NA	23990545	23971771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
tx.8399	chr17	-	2494	7	FSM	ENSMUSG00000040097.17	ENSMUST00000086325.13	2443	7	-51	0	29	0	multi-exon	FALSE	canonical	3	77	junction_6	22.386131619574	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTTGTGTGTTTGA	7554	False	NA	NA	False	NA	NA	NA	23990547	23974393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
tx.84	chr1	-	2982	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	45	4	-7	1	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	5015	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTCTGTGTGTATG	NA	False	NA	NA	False	NA	NA	NA	20890491	20873195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
tx.840	chr1	+	9117	35	FSM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	1	-3	1	3	multi-exon	FALSE	canonical	3	43	junction_3	11.0094328853373	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGCTAGTGGGTTGGT	6175	False	NA	NA	False	NA	NA	NA	136059127	136105739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
tx.8400	chr17	-	2602	8	NIC	ENSMUSG00000040097.17	novel	2443	7	NA	NA	22	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	46.0230643154016	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTGTGTTTGACTA	7547	False	NA	NA	False	NA	NA	NA	23990554	23974390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
tx.8401	chr17	+	8858	15	FSM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	7	-1	7	1	multi-exon	FALSE	canonical	3	160	junction_12	24.3951316655515	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	24022167	24043711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
tx.8402	chr17	+	5541	5	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	13958	4	-2129	1	3prime_fragment	FALSE	canonical	3	160	junction_2	14.3069039278245	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	823	False	NA	NA	False	NA	NA	NA	24036152	24043711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
tx.8403	chr17	+	5050	3	FSM	ENSMUSG00000092981.3_ENSMUSG00000039218.18	ENSMUST00000190568.2	597	3	-4043	-410	174	1	multi-exon	FALSE	canonical	3	162	junction_1	16	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	213	False	NA	NA	False	NA	NA	NA	24038455	24043711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24042879_24042989_24043095_24043189
tx.8404	chr17	-	546	3	FSM	ENSMUSG00000055839.7	ENSMUST00000232702.2	581	3	35	0	35	0	multi-exon	FALSE	canonical	3	11428	junction_1	404.5	210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTACTGCATTTCTCATT	NA	False	NA	NA	False	NA	NA	NA	24048022	24043718	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24043954_24046441_24046548_24047817
tx.8405	chr17	-	528	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	3	6	3	1	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	1378	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTGCATTTCTCATTT	NA	False	NA	NA	False	NA	NA	NA	24048107	24043717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
tx.8406	chr17	-	2490	3	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-24	727	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	9	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATAGTTTTAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	24063170	24059298	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_24061500_24062415_24062585_24063050
tx.8407	chr17	-	2760	4	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-12	721	intron_retention	FALSE	canonical	3	22	junction_1	3.85861230093008	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACATATAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	24063158	24059304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_24061500_24062415_24062846_24062930_24062958_24063050
tx.8408	chr17	-	2132	3	FSM	ENSMUSG00000024114.16	ENSMUST00000141788.2	903	3	-35	-1194	-12	0	multi-exon	FALSE	canonical	3	22	junction_1	4.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGGATGCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	24063158	24060025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24061500_24062415_24062846_24062930
tx.8409	chr17	-	1793	5	FSM	ENSMUSG00000024114.16	ENSMUST00000151797.3	1799	5	-12	18	-12	-18	multi-exon	FALSE	canonical	3	18	junction_2	4.71036092035419	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCATCCTTTCTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	24063158	24060043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24061500_24062415_24062585_24062812_24062846_24062930_24062958_24063050
tx.841	chr1	+	6248	18	ISM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	27934	-2	-1035	2	3prime_fragment	FALSE	canonical	3	55	junction_1	10.6446211053991	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGGCTAGTGGGTTGG	NA	False	NA	NA	False	NA	NA	NA	136087060	136105738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
tx.8410	chr17	-	1904	2	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTAATGAGTCCTTGT	9564	False	NA	NA	False	NA	NA	NA	24241825	24239833	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_24240269_24240356
tx.8411	chr17	-	4112	3	Genic_Genomic	ENSMUSG00000077184.4	novel	129	1	NA	NA	-3380	2279	multi-exon	FALSE	canonical	2	8	junction_2	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCAGCAAGTTTGAGTC	5707	False	NA	NA	False	NA	NA	NA	24245682	24239894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Genic_Genomic_chr17_-_24240269_24241539_24241635_24242039
tx.8412	chr17	-	2413	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	31	-1	31	1	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	1156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCAACTGTGAATATCT	NA	False	NA	NA	False	NA	NA	NA	24292428	24266706	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
tx.8413	chr17	-	4099	5	NIC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	33	-1	intron_retention	FALSE	canonical	3	983	junction_2	54.7054613361408	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCAGCAACTGTGAATAT	NA	False	NA	NA	False	NA	NA	NA	24292426	24266708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_24268419_24274898_24276811_24278195_24278288_24279216_24279326_24292150
tx.8414	chr17	-	7157	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	2	2	2	1	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTTTGCCATGGAGC	NA	False	NA	NA	False	NA	NA	NA	24360567	24292655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
tx.8415	chr17	-	1475	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	21	0	-15	0	multi-exon	TRUE	canonical	3	306	junction_8	20.5156038175824	250	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	NA	False	NA	NA	NA	24382719	24374806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
tx.8416	chr17	-	1159	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	24	0	24	0	multi-exon	FALSE	canonical	3	1416	junction_2	838.5	1203	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	NA	NA	NA	24388411	24382839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24383583_24383672_24383857_24388179
tx.8417	chr17	-	4806	9	NNC	ENSMUSG00000036473.17	novel	4383	9	NA	NA	-10	362	intron_retention	FALSE	canonical	0	0	junction_1	9.74679434480896	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCTATTTTTTATAAG	NA	False	NA	NA	False	NA	NA	NA	24424519	24397166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405176_24408917_24409028_24424447
tx.8418	chr17	-	2150	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	12	4	12	-4	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTACCGGGCAGTGGTG	3349	False	NA	NA	False	NA	NA	NA	24439752	24434031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
tx.8419	chr17	-	2265	9	FSM	ENSMUSG00000024118.15	ENSMUST00000137648.8	2160	9	76	-181	15	-4	multi-exon	FALSE	canonical	3	185	junction_8	21.2485293608758	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTACCGGGCAGTGGTG	3352	False	NA	NA	False	NA	NA	NA	24439749	24434031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
tx.842	chr1	+	6099	17	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	-924	3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	17.2839340139911	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGCTAGTGGGTTGGT	NA	False	NA	NA	False	NA	NA	NA	136087171	136105739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
tx.8420	chr17	-	3066	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	35	1032	-27	-1032	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	1492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8710	False	NA	NA	False	NA	NA	NA	24470348	24442203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
tx.8421	chr17	+	6474	33	FSM	ENSMUSG00000024130.17	ENSMUST00000039013.15	6476	33	2	0	2	0	multi-exon	FALSE	canonical	3	19	junction_1	5.69230566203186	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTTTGAGTCATACAT	NA	False	NA	NA	False	NA	NA	NA	24570998	24629175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24571226_24576892_24576966_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
tx.8422	chr17	+	6396	32	FSM	ENSMUSG00000024130.17	ENSMUST00000079594.12	6380	32	-17	1	6	-1	multi-exon	FALSE	canonical	3	9	junction_1	6.38937724033029	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTCTTTGAGTCATACA	NA	False	NA	NA	False	NA	NA	NA	24571002	24629174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24571226_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
tx.8423	chr17	+	1614	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	32	0	3	0	multi-exon	FALSE	canonical	3	629	junction_1	362.779738807019	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	916	False	NA	NA	False	NA	NA	NA	24633651	24644869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
tx.8424	chr17	+	1917	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	6	-3	6	0	multi-exon	FALSE	canonical	3	410	junction_1	446.592917963328	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	919	False	NA	NA	False	NA	NA	NA	24633654	24644872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
tx.8425	chr17	+	1795	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	18	3	6	0	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	569	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	919	False	NA	NA	False	NA	NA	NA	24633654	24644872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
tx.8426	chr17	+	1732	8	FSM	ENSMUSG00000034681.18	ENSMUST00000234977.2	1769	8	31	6	7	0	multi-exon	FALSE	canonical	3	75	junction_2	570.995335768505	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	920	False	NA	NA	False	NA	NA	NA	24633655	24644869	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
tx.8427	chr17	+	2216	8	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	495	junction_1	374.654888816743	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	926	False	NA	NA	False	NA	NA	NA	24633661	24644872	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
tx.8428	chr17	+	1088	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	44	5	2	-5	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTCTCTTAGCTCTTG	4884	False	NA	NA	False	NA	NA	NA	24645658	24658289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
tx.8429	chr17	-	2591	14	FSM	ENSMUSG00000024137.10	ENSMUST00000056032.9	2574	14	-19	2	-15	1	multi-exon	FALSE	canonical	3	30	junction_6	25.0001183429152	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTGTTGTGATTGGGT	NA	False	NA	NA	False	NA	NA	NA	24674304	24662754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
tx.843	chr1	-	2796	10	FSM	ENSMUSG00000041605.17	ENSMUST00000120339.8	2988	10	201	-9	56	9	multi-exon	TRUE	canonical	3	39	junction_9	8.93736780097342	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGTGTGTGCTGAGT	NA	False	NA	NA	False	NA	NA	NA	136161801	136141259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136161640
tx.8430	chr17	-	2578	14	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_6	16.2546306556464	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTGATTGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	24674285	24662751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
tx.8431	chr17	+	2582	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	35	10	-8	-10	multi-exon	FALSE	canonical	3	1130	junction_1	0	854	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGATTAGGTCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	24689400	24692074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24690124_24690215
tx.8432	chr17	-	3300	8	FSM	ENSMUSG00000024142.16	ENSMUST00000234686.2	3855	8	558	-3	-7	0	multi-exon	FALSE	canonical	3	68	junction_2	8.85483840989242	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	24697459	24692524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293
tx.8433	chr17	-	3333	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	27	-2	-4	0	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9614	False	NA	NA	False	NA	NA	NA	24698025	24692524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
tx.8434	chr17	-	3313	9	FSM	ENSMUSG00000024142.16	ENSMUST00000179163.3	3340	9	27	0	-4	0	multi-exon	FALSE	canonical	3	12	junction_8	23.0813777751676	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9614	False	NA	NA	False	NA	NA	NA	24698025	24692524	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
tx.8435	chr17	-	2639	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_18	68.0276414408143	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	24746833	24727823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
tx.8436	chr17	-	2636	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	79	288	4	0	multi-exon	FALSE	canonical	3	280	junction_18	53.1587010751768	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	24746833	24727823	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
tx.8437	chr17	+	294	2	FSM	ENSMUSG00000093565.2	ENSMUST00000176921.2	298	2	3	1	3	0	multi-exon	TRUE	canonical	3	77	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTTTCAGACGTTGT	4767	False	NA	NA	False	NA	NA	NA	24747224	24747717	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24747411_24747609
tx.8438	chr17	-	1401	9	FSM	ENSMUSG00000079657.11	ENSMUST00000035797.16	1575	9	164	10	2	1	multi-exon	FALSE	canonical	3	65	junction_8	7.78520230951001	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCATCTGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	24752698	24748037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24748618_24748714_24748792_24748887_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
tx.8439	chr17	+	1577	2	ISM	ENSMUSG00000032855.7	ENSMUST00000227107.2	6681	31	18294	-1	3434	0	3prime_fragment	FALSE	canonical	3	22	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCCAGATGTGCGTGTGC	9459	False	NA	NA	False	NA	NA	NA	24813811	24815482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_24813952_24814045
tx.844	chr1	-	2636	9	ISM	ENSMUSG00000041605.17	ENSMUST00000120339.8	2988	10	6600	-8	-2	8	3prime_fragment	FALSE	canonical	3	47	junction_7	6.61319703320565	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTGTGTGTGCTGAG	NA	False	NA	NA	False	NA	NA	NA	136155402	136141260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251
tx.8440	chr17	-	5454	40	FSM	ENSMUSG00000002496.11	ENSMUST00000228412.2	5432	40	11	-33	8	1	multi-exon	TRUE	canonical	3	88	junction_15	40.1073674085831	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	NA	False	NA	NA	NA	24851593	24815461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
tx.8441	chr17	+	2090	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234308.2	2084	6	-4	-2	-4	1	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	902	False	NA	NA	False	NA	NA	NA	24851649	24857812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24852833_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
tx.8442	chr17	+	982	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234635.2	893	6	-32	-57	5	0	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	913	False	NA	NA	False	NA	NA	NA	24851660	24857810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24851738_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
tx.8443	chr17	+	1073	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	5	1	5	0	multi-exon	FALSE	canonical	3	194	junction_2	26.3772629360971	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	913	False	NA	NA	False	NA	NA	NA	24851660	24857810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
tx.8444	chr17	-	1237	2	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	4263	0	4230	0	3prime_fragment	FALSE	canonical	3	161	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGCCTGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	24859701	24858259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_24859364_24859568
tx.8445	chr17	-	2075	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234557.2	2035	6	-42	2	-4	-2	multi-exon	TRUE	canonical	3	15	junction_1	24.9671784549236	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCGCCTGTGTGTT	5137	False	NA	NA	False	NA	NA	NA	24869305	24858261	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24859364_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
tx.8446	chr17	-	2140	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	-4	0	-4	0	multi-exon	FALSE	canonical	3	54	junction_5	35.3478743663919	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGCCTGTGTGTTTT	5137	False	NA	NA	False	NA	NA	NA	24869305	24858259	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
tx.8447	chr17	+	3327	12	FSM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-44	0	16	0	multi-exon	FALSE	canonical	3	229	junction_6	142.469309439723	353	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1192	False	NA	NA	False	NA	NA	NA	24888676	24900990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
tx.8448	chr17	+	3342	12	FSM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	10	0	10	0	multi-exon	FALSE	canonical	3	262	junction_10	128.150802179204	455	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1186	False	NA	NA	False	NA	NA	NA	24888670	24900990	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
tx.8449	chr17	-	1616	3	ISM	ENSMUSG00000040888.11	ENSMUST00000234520.2	1177	4	-58	-1	-14	1	intron_retention	FALSE	canonical	0	0	junction_1	311	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGGTTTCTGTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	24915144	24912162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_24912587_24913141_24913417_24914227
tx.845	chr1	-	2710	10	NIC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	56	8	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	17.8954439335895	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTGTGTGTGCTGAG	NA	False	NA	NA	False	NA	NA	NA	136161801	136141260	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155316_136161640
tx.8450	chr17	-	2384	2	ISM	ENSMUSG00000040888.11	ENSMUST00000234520.2	1177	4	-15	-1	-15	1	intron_retention	FALSE	canonical	0	0	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGGTTTCTGTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	24915101	24912162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_24912587_24913141
tx.8451	chr17	-	1224	4	FSM	ENSMUSG00000040888.11	ENSMUST00000234520.2	1177	4	-46	-1	-2	1	multi-exon	FALSE	canonical	0	0	junction_1	273.584843634779	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGGTTTCTGTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	24915132	24912162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24912587_24913141_24913417_24914227_24914425_24914804
tx.8452	chr17	-	770	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	0	1006	0	-11	multi-exon	FALSE	canonical	3	527	junction_2	47.5	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTTTCTGTAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	24915130	24913169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24913417_24914227_24914425_24914804
tx.8453	chr17	-	2501	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	23	2702	-6	-193	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	1092	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCTCATGTGAATC	NA	False	NA	NA	False	NA	NA	NA	24926611	24919624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
tx.8454	chr17	-	120	2	FSM	ENSMUSG00000090101.2	ENSMUST00000161706.2	183	2	63	0	63	0	multi-exon	FALSE	canonical	3	215	junction_1	0	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATCGTATGTTGGTGTTT	4364	False	NA	NA	False	NA	NA	NA	24938876	24938504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24938582_24938833
tx.8455	chr17	+	950	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	47	1	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	2855.80020309545	728	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6237	False	NA	NA	False	NA	NA	NA	24939083	24940899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
tx.8456	chr17	+	1076	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	14	4	14	0	multi-exon	FALSE	canonical	3	8303	junction_1	1140.19655651997	347	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6251	False	NA	NA	False	NA	NA	NA	24939097	24940899	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
tx.8457	chr17	-	2184	2	FSM	ENSMUSG00000040048.15	ENSMUST00000141324.8	430	2	-1754	0	-9	0	multi-exon	FALSE	canonical	3	2001	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	NA	NA	NA	24943377	24941033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24941195_24941354
tx.8458	chr17	-	673	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	59	0	1	0	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	490	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	NA	NA	NA	24943393	24941033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
tx.8459	chr17	+	875	5	FSM	ENSMUSG00000075705.14	ENSMUST00000115262.9	886	5	9	2	9	-2	multi-exon	FALSE	canonical	3	96	junction_4	30.3685692781204	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGTGTTTGTTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	24955624	24961750	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879_24960912_24961283
tx.846	chr1	-	5074	7	ISM	ENSMUSG00000041570.15	ENSMUST00000048309.12	7823	19	64285	131	-69	-2	3prime_fragment	FALSE	canonical	3	44	junction_3	5.93717104351896	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTTTGATAACGTTA	3264	False	NA	NA	False	NA	NA	NA	136209557	136195991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043
tx.8460	chr17	+	1244	4	FSM	ENSMUSG00000075705.14	ENSMUST00000101800.7	1211	4	-32	-1	8	1	multi-exon	FALSE	canonical	3	148	junction_3	11.8602979164381	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTTCCGTGTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	24955623	24961746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879
tx.8461	chr17	+	1159	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	32	0	32	0	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	False	NA	NA	False	NA	NA	NA	25069495	25083424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
tx.8462	chr17	+	2637	2	FSM	ENSMUSG00000046070.10	ENSMUST00000050714.8	2625	2	-13	1	-13	-1	multi-exon	FALSE	canonical	3	22	junction_1	0	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTGACCTAGAGTGT	7762	False	NA	NA	False	NA	NA	NA	25097218	25100983	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25097799_25098926
tx.8463	chr17	-	1413	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	9	5	0	0	multi-exon	TRUE	canonical	3	605	junction_4	56.4111888034831	446	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	25105313	25101590	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
tx.8464	chr17	+	1591	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	47	3	10	-1	multi-exon	FALSE	canonical	3	99	junction_1	37.7388688519174	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTGTGTCTATTG	NA	False	NA	NA	False	NA	NA	NA	25105663	25111120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
tx.8465	chr17	+	1874	7	FSM	ENSMUSG00000024160.17	ENSMUST00000120943.8	1949	7	73	2	-6	0	multi-exon	FALSE	canonical	3	47	junction_1	56.1921307262463	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTGTGTCTATTGT	NA	False	NA	NA	False	NA	NA	NA	25105726	25111121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
tx.8466	chr17	+	2016	7	NNC	ENSMUSG00000024160.17	novel	1953	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	67.8052767530342	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTGTGTCTATTG	NA	False	NA	NA	False	NA	NA	NA	25105734	25111120	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_25106231_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
tx.8467	chr17	+	2548	6	NIC	ENSMUSG00000024160.17	novel	1953	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	176	junction_3	15.3753048750261	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTGTGTCTATTGT	NA	False	NA	NA	False	NA	NA	NA	25105726	25111121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
tx.8468	chr17	-	1509	8	FSM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	19	-7	-6	7	multi-exon	TRUE	canonical	3	24	junction_1	4.68606270481621	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAAGGCTCTTTTA	1883	False	NA	NA	False	NA	NA	NA	25114042	25111118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
tx.8469	chr17	+	895	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	23	0	4	0	multi-exon	FALSE	canonical	3	645	junction_1	12	222	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	NA	False	NA	NA	NA	25114112	25115263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25114463_25114635_25114679_25114761
tx.847	chr1	-	7640	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	-406	-905	0	-3	multi-exon	FALSE	canonical	3	33	junction_16	9.18197112552637	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTTTGATAACGTT	6750	False	NA	NA	False	NA	NA	NA	136273842	136195992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
tx.8470	chr17	+	702	5	FSM	ENSMUSG00000073435.11	ENSMUST00000024978.7	715	5	-5	18	-5	-18	multi-exon	FALSE	canonical	3	182	junction_1	9.82344135219425	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGCTGGTGAAGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	25115468	25116478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001_25116115_25116187
tx.8471	chr17	-	6610	25	NNC	ENSMUSG00000024163.18	novel	5431	31	NA	NA	-85	0	intron_retention	FALSE	non_canonical	0	0	junction_22	13.3847316621091	2	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	4700	False	NA	NA	False	NA	NA	NA	25135626	25116506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432
tx.8472	chr17	-	5439	31	NIC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_22	11.8369008706765	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	NA	False	NA	NA	NA	25155937	25116506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
tx.8473	chr17	-	5464	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	14.0296907386522	29	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	NA	False	NA	NA	NA	25155951	25116506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
tx.8474	chr17	-	2947	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	42	-317	-2	317	multi-exon	TRUE	canonical	3	1697	junction_3	70.6872513258225	2376	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCCTGTGTGTATTTTG	4815	False	NA	NA	False	NA	NA	NA	25179621	25161126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
tx.8475	chr17	+	5766	30	FSM	ENSMUSG00000024169.17	ENSMUST00000024983.12	5489	30	-277	0	23	0	multi-exon	FALSE	canonical	3	43	junction_2	11.5756314625783	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAAAAGGCTGTAC	6906	False	NA	NA	False	NA	NA	NA	25235087	25318461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
tx.8476	chr17	-	3514	21	FSM	ENSMUSG00000024170.16	ENSMUST00000115181.9	3530	21	13	3	0	-3	multi-exon	TRUE	canonical	3	51	junction_18	13.9207578816672	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTGCTTCTGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	25334928	25318546	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
tx.8477	chr17	-	3496	21	FSM	ENSMUSG00000024170.16	ENSMUST00000024987.6	3434	21	-60	-2	2	2	multi-exon	FALSE	canonical	3	21	junction_20	19.5787512369916	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	25334939	25318548	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
tx.8478	chr17	+	4051	25	FSM	ENSMUSG00000036636.11	ENSMUST00000040729.9	4071	25	15	5	15	0	multi-exon	FALSE	canonical	3	111	junction_8	12.081896466293	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCAGTATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	25352379	25381073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
tx.8479	chr17	+	4875	24	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	20	0	intron_retention	FALSE	canonical	3	111	junction_7	12.1627277808041	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	NA	False	NA	NA	NA	25352384	25381072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
tx.848	chr1	+	2004	7	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	29	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	23.4004985701872	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTTATTTATTTCAG	NA	False	NA	NA	False	NA	NA	NA	136343037	136367892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136367490
tx.8480	chr17	+	4104	25	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	28.4428032295615	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	NA	False	NA	NA	NA	25352388	25381072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375711_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
tx.8481	chr17	+	4106	26	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	36.5755328054152	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	NA	False	NA	NA	NA	25352389	25381072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366378_25366445_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
tx.8482	chr17	+	2313	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	18	699	18	-699	multi-exon	FALSE	canonical	3	314	junction_1	0	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGGTGTCACAGGTGA	NA	False	NA	NA	False	NA	NA	NA	25403545	25405937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25403615_25403693
tx.8483	chr17	+	4575	14	NIC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	15.8737623568248	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	NA	False	NA	NA	NA	25407345	25453416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25449180_25449384_25449494_25449750_25450685
tx.8484	chr17	+	4710	15	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.2957362646848	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	25407336	25453417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_25407467_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
tx.8485	chr17	+	4474	14	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.5796053776771	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	25407344	25453417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_25407467_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25449180_25449384_25449494_25449750_25450685
tx.8486	chr17	+	4797	15	FSM	ENSMUSG00000015127.15	ENSMUST00000039734.12	4779	15	-18	0	-18	0	multi-exon	FALSE	canonical	3	27	junction_1	11.8347464903054	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	25407352	25453417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
tx.8487	chr17	+	3599	5	FSM	ENSMUSG00000015127.15	ENSMUST00000015271.12	3414	5	-184	-1	-141	0	multi-exon	FALSE	canonical	2	5	junction_2	29.3459963197708	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	25441371	25453417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25441697_25447556_25447641_25449180_25449384_25449494_25449750_25450685
tx.8488	chr17	+	3825	6	NIC	ENSMUSG00000015127.15	novel	3414	5	NA	NA	-139	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	22.1954950384081	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	25441373	25453417	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_25441697_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
tx.8489	chr17	-	1284	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-24	-26	-16	26	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATCTGGGTTAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	25459114	25453264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
tx.849	chr1	+	2139	8	FSM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	25	2	25	-2	multi-exon	FALSE	canonical	3	59	junction_1	8.75750407085377	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTATTTATTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	136343033	136367894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136362243_136362373_136367490
tx.8490	chr17	+	1173	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	19	0	19	0	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	231	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4622	False	NA	NA	False	NA	NA	NA	25459162	25461772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
tx.8491	chr17	-	5276	3	FSM	ENSMUSG00000015120.16	ENSMUST00000174216.8	1144	3	-2464	-1668	-2464	1405	multi-exon	FALSE	canonical	3	4875	junction_1	136.5	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	9797	False	NA	NA	False	NA	NA	NA	25487307	25479484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25481466_25483739_25483820_25484092
tx.8492	chr17	-	6284	6	ISM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	25	-1410	25	1405	intron_retention	FALSE	canonical	3	4553	junction_4	236.966326721752	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4772	False	NA	NA	False	NA	NA	NA	25492332	25479484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376
tx.8493	chr17	-	2728	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	-32	-1410	-32	1405	multi-exon	FALSE	canonical	3	84	junction_7	2152.45295286232	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4715	False	NA	NA	False	NA	NA	NA	25492389	25479484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
tx.8494	chr17	-	2793	7	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-2	1405	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4261	False	NA	NA	False	NA	NA	NA	25492843	25479484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
tx.8495	chr17	-	2496	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	123	-1795	-28	1405	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	1774	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4719	False	NA	NA	False	NA	NA	NA	25492385	25479484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
tx.8496	chr17	-	2549	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	3	-1662	3	1403	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCTCGGGTTGTGTCC	3823	False	NA	NA	False	NA	NA	NA	25493281	25479486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
tx.8497	chr17	-	4412	6	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-33	4	intron_retention	FALSE	canonical	3	4214	junction_5	346.443068916092	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCATTATCATCATT	4714	False	NA	NA	False	NA	NA	NA	25492390	25480885	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492294
tx.8498	chr17	-	1140	7	NNC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_6	1812.02422874407	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATTATCAT	4731	False	NA	NA	False	NA	NA	NA	25492373	25480889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492233
tx.8499	chr17	+	1747	10	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	5	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	39.1949858219166	108	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTACCTATACTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	25798155	25881701	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
tx.85	chr1	+	5362	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	-36	4	-36	-4	multi-exon	FALSE	canonical	3	9	junction_2	2.5	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTTGGCCTACATTAT	9064	False	NA	NA	False	NA	NA	NA	20960793	21009870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_20960911_21002283_21002464_21004805
tx.850	chr1	+	486	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	19282	2	2151	-2	3prime_fragment	FALSE	canonical	3	87	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTATTTATTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	136362290	136367894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_136362373_136367490
tx.8500	chr17	-	3105	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-4	107	-4	-3	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	621	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGGATGGTGCACTTGG	5679	False	NA	NA	False	NA	NA	NA	25946388	25938006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
tx.8501	chr17	-	3102	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	5	107	-4	-3	multi-exon	FALSE	canonical	3	337	junction_21	100.708127696462	525	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGGATGGTGCACTTGG	5679	False	NA	NA	False	NA	NA	NA	25946388	25938006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
tx.8502	chr17	-	3683	21	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	337	junction_20	102.590886534818	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5675	False	NA	NA	False	NA	NA	NA	25946392	25938019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
tx.8503	chr17	+	1726	6	FSM	ENSMUSG00000041199.4	ENSMUST00000047273.3	1745	6	17	2	2	-2	multi-exon	FALSE	canonical	3	41	junction_1	16.0299719276111	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTGACCATGAGCATAT	NA	False	NA	NA	False	NA	NA	NA	25946707	25950436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25946822_25947176_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
tx.8504	chr17	+	1529	5	FSM	ENSMUSG00000041199.4	ENSMUST00000235645.2	1531	5	11	-9	11	-1	multi-exon	FALSE	canonical	3	21	junction_1	24.712092181764	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGACCATGAGCATATC	NA	False	NA	NA	False	NA	NA	NA	25946716	25950437	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25946822_25947496_25947621_25947799_25947903_25948041_25948144_25949342
tx.8505	chr17	-	2149	16	FSM	ENSMUSG00000063011.8	ENSMUST00000238120.2	2165	16	16	0	16	0	multi-exon	TRUE	canonical	3	34	junction_13	10.6111052937739	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6608	False	NA	NA	False	NA	NA	NA	25973335	25967586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105
tx.8506	chr17	-	2059	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	-13	-2	-13	0	multi-exon	FALSE	canonical	3	34	junction_13	11.5648646230728	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6578	False	NA	NA	False	NA	NA	NA	25973365	25967586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
tx.8507	chr17	+	2021	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	20	514	-8	22	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	212	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCCTTTCAAAGTTTT	6940	False	NA	NA	False	NA	NA	NA	25992769	26001792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
tx.8508	chr17	+	2309	10	NIC	ENSMUSG00000002280.12	novel	2062	11	NA	NA	-8	22	intron_retention	FALSE	canonical	3	241	junction_4	18.6368809979925	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCCTTTCAAAGTTTT	6940	False	NA	NA	False	NA	NA	NA	25992769	26001792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661_26000820_26000989
tx.8509	chr17	-	1302	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	90	13	-1	0	multi-exon	FALSE	canonical	3	40	junction_4	8.07387763097757	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATCCTTCCAGAGGTGC	4343	False	NA	NA	False	NA	NA	NA	26004557	26001775	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
tx.851	chr1	+	3755	21	NIC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	26	7565	intron_retention	FALSE	canonical	3	49	junction_13	8.08006806902021	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTGTGGTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	136394106	136431219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
tx.8510	chr17	-	916	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	405	0	2	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7185796180472	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTTTGTTCCAGGAA	8372	False	NA	NA	False	NA	NA	NA	26011367	26009474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
tx.8511	chr17	-	1372	3	FSM	ENSMUSG00000057411.10	ENSMUST00000236842.2	1886	3	508	6	2	0	multi-exon	FALSE	canonical	3	227	junction_2	3.5	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8372	False	NA	NA	False	NA	NA	NA	26011367	26009479	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26009753_26009906_26009958_26010319
tx.8512	chr17	-	641	5	FSM	ENSMUSG00000057411.10	ENSMUST00000236683.2	627	5	-16	2	-8	-2	multi-exon	FALSE	canonical	3	28	junction_4	82.996987897152	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	8362	False	NA	NA	False	NA	NA	NA	26011377	26009481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011304
tx.8513	chr17	-	1161	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-15	1605	-15	-1	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTAGTCATGGTCT	5878	False	NA	NA	False	NA	NA	NA	26016072	26013799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
tx.8514	chr17	+	3555	6	FSM	ENSMUSG00000025738.9	ENSMUST00000045692.9	3489	6	-59	-7	-59	7	multi-exon	TRUE	canonical	3	16	junction_5	4.22374241638857	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGGGTTATTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	26027999	26040236	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26028361_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347
tx.8515	chr17	+	3071	9	FSM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	23	5	1	4	multi-exon	FALSE	canonical	3	89	junction_2	16.5529453572468	192	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCACTTGTCACTTT	NA	False	NA	NA	False	NA	NA	NA	26042623	26047699	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
tx.8516	chr17	+	2071	9	FSM	ENSMUSG00000025736.16	ENSMUST00000026832.14	2091	9	10	10	1	-10	multi-exon	FALSE	canonical	3	70	junction_1	9.19238815542512	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGCTCACTCTCCTGG	NA	False	NA	NA	False	NA	NA	NA	26048026	26050806	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
tx.8517	chr17	-	1255	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	418	130	-2	-1	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	871	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCATGTGCTGGTGCAG	6763	False	NA	NA	False	NA	NA	NA	26051917	26049608	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
tx.8518	chr17	-	2865	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	322	2	1	-2	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	6009	False	NA	NA	False	NA	NA	NA	26063503	26057432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
tx.8519	chr17	-	5949	41	FSM	ENSMUSG00000073434.13	ENSMUST00000176923.9	5962	41	12	1	12	0	multi-exon	FALSE	canonical	3	25	junction_38	17.4845646214025	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTTTTATTGTCCC	9820	False	NA	NA	False	NA	NA	NA	26080463	26063746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
tx.852	chr1	+	7348	30	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	49	1928	intron_retention	FALSE	canonical	3	13	junction_1	12.7319385489885	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAACCGCCTCCTAATCC	NA	False	NA	NA	False	NA	NA	NA	136394129	136457312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
tx.8520	chr17	-	824	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	18	0	-9	0	multi-exon	FALSE	canonical	3	256	junction_1	22.6770809408971	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7780	False	NA	NA	False	NA	NA	NA	26087720	26082671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
tx.8521	chr17	+	805	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	431	7	4	2	multi-exon	FALSE	canonical	3	287	junction_5	67.7542618585724	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCTTGCTGGGAATAC	7199	False	NA	NA	False	NA	NA	NA	26094478	26096136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
tx.8522	chr17	+	1020	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	-1	7	0	2	multi-exon	FALSE	canonical	3	348	junction_1	48.8287824955732	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCTTGCTGGGAATAC	7194	False	NA	NA	False	NA	NA	NA	26094473	26096136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
tx.8523	chr17	-	3954	3	ISM	ENSMUSG00000025730.15	ENSMUST00000166619.8	2238	6	26622	-3	26622	0	3prime_fragment	FALSE	canonical	3	194	junction_1	13.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	7587	False	NA	NA	False	NA	NA	NA	26105984	26101087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_26102883_26103553_26103777_26104048
tx.8524	chr17	-	2559	6	FSM	ENSMUSG00000025730.15	ENSMUST00000167626.8	2506	6	-53	0	6	0	multi-exon	FALSE	canonical	3	194	junction_1	13.251415018782	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	NA	False	NA	NA	NA	26138679	26101087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338
tx.8525	chr17	-	2479	7	FSM	ENSMUSG00000025730.15	ENSMUST00000026826.14	2466	7	-13	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	27.4104602904317	288	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	NA	False	NA	NA	NA	26138701	26101087	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
tx.8526	chr17	-	7527	10	NIC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	-17	4562	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	88.3641455694685	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGTGCCAGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	26160926	26140832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
tx.8527	chr17	-	3073	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	94	6	-19	0	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	526	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	26160928	26145400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
tx.8528	chr17	-	4378	10	ISM	ENSMUSG00000037326.11	ENSMUST00000212520.2	5216	12	20495	-3	-1541	0	3prime_fragment	TRUE	canonical	0	0	junction_4	24.6806767020099	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	26184275	26177340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000
tx.8529	chr17	-	4901	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_4	23.9282260103001	91	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1751	False	NA	NA	False	NA	NA	NA	26204741	26177340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
tx.853	chr1	+	3731	20	ISM	ENSMUSG00000041498.14	ENSMUST00000189413.7	8943	29	-88	28025	-88	7570	5prime_fragment	FALSE	canonical	3	49	junction_12	7.93114412247141	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGGTTTGCCTGCATG	NA	False	NA	NA	False	NA	NA	NA	136395584	136431224	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
tx.8530	chr17	-	5371	15	FSM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	9	3	9	-3	multi-exon	FALSE	canonical	3	33	junction_10	23.7715530559927	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGGCTTCTTTCTCCA	NA	False	NA	NA	False	NA	NA	NA	26288510	26208012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
tx.8531	chr17	-	5241	14	FSM	ENSMUSG00000037098.19	ENSMUST00000120691.9	5249	14	13	-5	3	2	multi-exon	FALSE	canonical	3	56	junction_9	17.5610515785467	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGCCGGCTTCTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	26288516	26208013	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
tx.8532	chr17	-	5189	13	NIC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	15	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	27.4634858595109	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACGGAGCCGGCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	26288504	26208017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
tx.8533	chr17	-	2141	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	64	19	2	0	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	198	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	NA	False	NA	NA	NA	26309247	26300203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
tx.8534	chr17	-	2308	12	Fusion	ENSMUSG00000036775.14_ENSMUSG00000024177.10	novel	2224	9	NA	NA	-3	0	multi-exon	FALSE	canonical	2	3	junction_8	95.7316324656874	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	NA	False	NA	NA	NA	26314466	26300203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26312590_26312704_26312832_26312935_26313110_26313245_26314338
tx.8535	chr17	-	895	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	110	1	-3	-1	multi-exon	FALSE	canonical	3	296	junction_2	23.847169643377	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCTACTTACTAGTTCT	NA	False	NA	NA	False	NA	NA	NA	26314466	26310708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
tx.8536	chr17	-	2665	2	FSM	ENSMUSG00000024177.10	ENSMUST00000150280.3	995	2	-7	-1663	-3	0	multi-exon	FALSE	canonical	3	319	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	26314466	26310707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26313245_26314338
tx.8537	chr17	+	3467	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	-6	3	-6	2	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	456	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	26332283	26342225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
tx.8538	chr17	+	3563	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	294	junction_6	43.2578278398429	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGAGTGGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	26332287	26342223	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
tx.8539	chr17	+	3760	12	ISM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	-15	0	2	0	intron_retention	FALSE	canonical	3	294	junction_7	43.4708984064565	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	26332274	26342228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513
tx.854	chr1	+	7096	29	FSM	ENSMUSG00000041498.14	ENSMUST00000189413.7	8943	29	-88	1935	-88	1930	multi-exon	FALSE	canonical	3	34	junction_22	10.1365045498829	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGCCTCCTAATCCAG	NA	False	NA	NA	False	NA	NA	NA	136395584	136457314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
tx.8540	chr17	+	3475	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	115.934847603682	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	26332290	26342225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338357_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
tx.8541	chr17	+	1021	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	-19	0	5	0	multi-exon	FALSE	canonical	0	0	junction_2	671.536670629386	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	26342498	26345587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
tx.8542	chr17	+	1043	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	25	0	5	0	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	477	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	26342498	26345587	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
tx.8543	chr17	+	3663	10	FSM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	-257	-516	5	-1	multi-exon	FALSE	canonical	3	227	junction_8	47.4952889151735	360	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	NA	False	NA	NA	NA	26357666	26414784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
tx.8544	chr17	+	3770	11	FSM	ENSMUSG00000024182.18	ENSMUST00000074370.11	3777	11	6	1	6	-1	multi-exon	FALSE	canonical	3	153	junction_9	74.468852549237	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	NA	False	NA	NA	NA	26357667	26414784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
tx.8545	chr17	+	3278	9	ISM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	3704	-516	36	-1	3prime_fragment	FALSE	canonical	3	227	junction_7	45.5382737375935	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	1236	False	NA	NA	False	NA	NA	NA	26361627	26414784	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
tx.8546	chr17	-	1012	6	FSM	ENSMUSG00000073433.12	ENSMUST00000025019.9	1032	6	21	-1	21	1	multi-exon	TRUE	canonical	3	81	junction_2	6.72309452558864	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGCTGCTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	26420303	26418155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
tx.8547	chr17	-	2831	13	FSM	ENSMUSG00000024187.16	ENSMUST00000114988.8	3714	13	5	878	-4	-9	multi-exon	FALSE	canonical	3	154	junction_12	26.8089951736767	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGTCTGTCTGGAT	1924	False	NA	NA	False	NA	NA	NA	26463192	26431673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
tx.8548	chr17	-	2825	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	17	-9	17	9	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGCAGTCTGTCTGGA	1945	False	NA	NA	False	NA	NA	NA	26463171	26431674	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
tx.8549	chr17	+	1738	10	FSM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	-69	3	-21	0	multi-exon	FALSE	canonical	3	95	junction_2	196.74976273379	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	NA	False	NA	NA	NA	26471903	26499694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
tx.855	chr1	+	5204	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58253	-15	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	44.3867942072865	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACATTGAAGAAAGGAGA	NA	False	NA	NA	False	NA	NA	NA	136494385	136557776	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552598_136552790_136553009
tx.8550	chr17	+	2729	9	FSM	ENSMUSG00000024188.17	ENSMUST00000133032.8	2670	9	-60	1	-27	0	multi-exon	FALSE	canonical	3	162	junction_1	146.829354609356	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATGTTTACATTAGTG	NA	False	NA	NA	False	NA	NA	NA	26471897	26499693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
tx.8551	chr17	+	1668	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	32	0	-23	0	multi-exon	FALSE	canonical	3	393	junction_1	74.6521098161331	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATGTTTACATTAGTG	NA	False	NA	NA	False	NA	NA	NA	26471901	26499693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
tx.8552	chr17	+	3607	8	NIC	ENSMUSG00000024188.17	novel	1700	9	NA	NA	-23	0	intron_retention	FALSE	canonical	3	531	junction_1	36.4159642049966	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATGTTTACATTAGTG	NA	False	NA	NA	False	NA	NA	NA	26471901	26499693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
tx.8553	chr17	+	4959	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-23	-2	-23	2	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCAGGTGTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	26471901	26504480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
tx.8554	chr17	+	6899	9	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	-26	0	intron_retention	FALSE	canonical	3	213	junction_8	130.481559999871	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTCAGGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	26471898	26504478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
tx.8555	chr17	+	5972	10	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	162	junction_1	172.384010028715	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTCAGGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	26471943	26504478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
tx.8556	chr17	+	5030	11	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	-23	2	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	204.37027670383	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCAGGTGTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	26471901	26504480	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
tx.8557	chr17	-	1945	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	44	1	-1	0	multi-exon	FALSE	canonical	3	466	junction_2	22.365648262955	387	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCGTGCTTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	26727449	26724564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
tx.8558	chr17	+	1288	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACGTGTCTCTTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	26780476	26874326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
tx.8559	chr17	+	2725	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	27	2	-2	-2	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	334	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATATTGCTGTGACTCT	NA	False	NA	NA	False	NA	NA	NA	26780489	26875903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
tx.856	chr1	+	5725	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58244	-13	intron_retention	FALSE	canonical	3	42	junction_2	46.0506967012082	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATTGAAGAAAGGAGATA	NA	False	NA	NA	False	NA	NA	NA	136494394	136557778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_136494541_136551065_136551108_136552021_136552790_136553009
tx.8560	chr17	+	759	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_3	528.401993435553	65	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	26895391	26918621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_26895553_26901651_26901700_26914328_26914443_26918185
tx.8561	chr17	+	777	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	46	0	4	0	multi-exon	FALSE	canonical	3	1134	junction_3	173.829418300432	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	26895389	26918621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
tx.8562	chr17	+	4501	3	FSM	ENSMUSG00000015575.16	ENSMUST00000167352.2	2812	3	4	-1693	4	-3	multi-exon	FALSE	canonical	3	1484	junction_2	17.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGCTCCAGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	26895389	26918618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26895553_26901651_26901700_26914328
tx.8563	chr17	+	6039	6	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	1	-11	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	13.5114766032436	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTTTTGAATTGTTTG	1281	False	NA	NA	False	NA	NA	NA	26934624	26995598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_26934749_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
tx.8564	chr17	+	6031	9	NNC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-7	-1492	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.11339650965	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTCAAGAATGGATGT	1273	False	NA	NA	False	NA	NA	NA	26934616	26994117	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_26934803_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
tx.8565	chr17	+	7451	9	FSM	ENSMUSG00000048249.15	ENSMUST00000062519.14	7462	9	0	11	0	-11	multi-exon	FALSE	canonical	3	21	junction_1	7.89679523604354	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTTTTGAATTGTTTG	1280	False	NA	NA	False	NA	NA	NA	26934623	26995598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
tx.8566	chr17	+	6968	6	ISM	ENSMUSG00000048249.15	ENSMUST00000062519.14	7462	9	26428	12	-906	-12	3prime_fragment	FALSE	canonical	3	21	junction_1	7.30479294709987	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGTTTTGAATTGTTT	8182	False	NA	NA	False	NA	NA	NA	26961051	26995597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
tx.8567	chr17	+	1094	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	4	0	4	0	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGGTAAATGCTTAAC	1998	False	NA	NA	False	NA	NA	NA	27000043	27011495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
tx.8568	chr17	+	2327	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	10	294	10	-294	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTTAATCTTAGAT	NA	False	NA	NA	False	NA	NA	NA	27136074	27151263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
tx.8569	chr17	+	2272	10	NIC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	11	-294	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	138.283926920103	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTTAATCTTAGAT	NA	False	NA	NA	False	NA	NA	NA	27136075	27151263	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_27136260_27139770_27139906_27139993_27140094_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
tx.857	chr1	+	5117	2	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58218	-1729	intron_retention	FALSE	canonical	3	49	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGTTGCTAGGATT	NA	False	NA	NA	False	NA	NA	NA	136494420	136556062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_136494541_136551065
tx.8570	chr17	+	1500	5	ISM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	7113	6	7031	-6	3prime_fragment	FALSE	canonical	3	266	junction_2	59.8931339971453	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATGTCCATTGTGATG	NA	False	NA	NA	False	NA	NA	NA	27143177	27151551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
tx.8571	chr17	-	704	6	ISM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	119	0	-2	0	3prime_fragment	FALSE	canonical	3	511	junction_5	169.834507683215	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9371	False	NA	NA	False	NA	NA	NA	27158424	27156945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290
tx.8573	chr17	-	654	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	87	0	-18	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9339	False	NA	NA	False	NA	NA	NA	27158456	27156945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
tx.8574	chr17	-	639	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	24	-1	2	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9302	False	NA	NA	False	NA	NA	NA	27158493	27156945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
tx.8575	chr17	-	760	5	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	227	junction_4	311.485954739536	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9290	False	NA	NA	False	NA	NA	NA	27158505	27156945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158424
tx.8576	chr17	+	2777	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	18	1	18	-1	multi-exon	FALSE	canonical	3	46	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAGACTGGCTTGAGTG	NA	False	NA	NA	False	NA	NA	NA	27192158	27195176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27192289_27192529
tx.8577	chr17	+	411	2	FSM	ENSMUSG00000048731.16	ENSMUST00000142141.3	451	2	41	-1	15	1	multi-exon	FALSE	canonical	3	59	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTAGCGCCGGTTAATAT	NA	False	NA	NA	False	NA	NA	NA	27237001	27241492	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27237145_27241224
tx.8578	chr17	-	1965	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	420	2	-2	0	multi-exon	TRUE	canonical	3	126	junction_3	5.45527267879434	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCGCCTGGCATCTTTA	NA	False	NA	NA	False	NA	NA	NA	27247563	27238785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
tx.8579	chr17	+	8993	58	FSM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	-4	1	-4	-1	multi-exon	TRUE	canonical	0	0	junction_18	48.4846455023872	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	NA	False	NA	NA	NA	27276273	27341196	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
tx.858	chr1	+	5791	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-18	intron_retention	FALSE	canonical	3	15	junction_1	52.694283371159	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCACAACATTGAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	136494421	136557773	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_136494541_136526570_136526669_136551065_136551108_136552021_136552790_136553009
tx.8580	chr17	+	5045	30	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	48205	0	-668	0	3prime_fragment	FALSE	canonical	3	147	junction_3	28.502080780165	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	NA	False	NA	NA	NA	27324482	27341197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
tx.8582	chr17	-	470	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	25	5	11	0	multi-exon	FALSE	canonical	3	2713	junction_1	153.559977424675	282	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	1972	False	NA	NA	False	NA	NA	NA	27352865	27341641	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
tx.8583	chr17	-	2597	9	FSM	ENSMUSG00000044857.9	ENSMUST00000055117.9	2627	9	27	3	27	-3	multi-exon	FALSE	canonical	3	431	junction_7	66.5158580715907	819	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTGGTTTTATTTGTGG	8020	False	NA	NA	False	NA	NA	NA	27423416	27408576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
tx.8584	chr17	-	2160	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	-5	-6	-5	6	multi-exon	TRUE	canonical	3	72	junction_1	0	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACTTGGGTTTTTTTG	6244	False	NA	NA	False	NA	NA	NA	27461638	27454042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27456112_27461547
tx.8585	chr17	+	4973	2	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTGTTCCATCTTCC	NA	False	NA	NA	False	NA	NA	NA	27453123	27458368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_+_27457979_27458250
tx.8586	chr17	-	3447	10	ISM	ENSMUSG00000063239.18	ENSMUST00000118161.3	4607	11	10413	5	311	3	3prime_fragment	FALSE	canonical	2	11	junction_6	4.15739709641549	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCTGCGTGTCCACTG	7113	False	NA	NA	False	NA	NA	NA	27721967	27644877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27721620
tx.8587	chr17	-	4598	11	FSM	ENSMUSG00000063239.18	ENSMUST00000118161.3	4607	11	4	5	4	3	multi-exon	FALSE	canonical	2	4	junction_10	6.16116872029975	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCTGCGTGTCCACTG	NA	False	NA	NA	False	NA	NA	NA	27732376	27644877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27721620_27722508_27731765
tx.8588	chr17	+	1965	5	FSM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	-60	-7	4	0	multi-exon	FALSE	canonical	3	442	junction_1	2173.91908485574	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	27775581	27782644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
tx.8589	chr17	+	1610	5	FSM	ENSMUSG00000046711.17	ENSMUST00000114888.11	1631	5	23	-2	4	0	multi-exon	FALSE	canonical	3	2165	junction_2	1373.00680533638	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	27775581	27782644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781411
tx.859	chr1	+	5159	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58251	-9	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	57.5577005177317	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAAGGAGATATCAC	NA	False	NA	NA	False	NA	NA	NA	136494387	136557782	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_136494541_136551065_136551108_136552598_136552790_136553009
tx.8590	chr17	+	1643	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	34	4	4	0	multi-exon	FALSE	canonical	3	3635	junction_2	873.596123789477	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	27775581	27782644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
tx.8591	chr17	+	1618	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	-3	-698	-1	0	multi-exon	FALSE	canonical	3	1035	junction_1	1979.76797882984	345	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	27775611	27782644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781411
tx.8592	chr17	+	1638	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	37	-645	-2	0	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	569	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	27775624	27782644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
tx.8593	chr17	-	635	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	31	196	1	0	multi-exon	FALSE	canonical	3	219	junction_4	17.0934929139717	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCCTCCTTGGGTGGAC	NA	False	NA	NA	False	NA	NA	NA	27784699	27782742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
tx.8594	chr17	-	2195	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	23	5	23	0	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	359	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCTCTTTGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	27842446	27798360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
tx.8595	chr17	-	612	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	271	4	-30	0	multi-exon	FALSE	canonical	3	4719	junction_5	828.025700084243	909	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACTTGTGTATGTTCT	NA	False	NA	NA	False	NA	NA	NA	27854248	27849395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
tx.8596	chr17	+	1438	8	ISM	ENSMUSG00000040276.16	ENSMUST00000097360.3	1800	10	17494	-33	-1766	0	3prime_fragment	FALSE	canonical	3	26	junction_1	11.2866184086307	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCGTTTGCAGCCTACC	NA	False	NA	NA	False	NA	NA	NA	27921664	27927666	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
tx.8597	chr17	-	3822	5	FSM	ENSMUSG00000056692.14	ENSMUST00000114863.10	3892	5	59	11	0	0	multi-exon	FALSE	canonical	3	33	junction_4	5.43139024560011	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTTTATCCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	28039540	27970219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27972970_27986884_27987214_28005044_28005243_28012882_28013038_28039150
tx.8598	chr17	-	3234	3	ISM	ENSMUSG00000056692.14	ENSMUST00000114863.10	3892	5	34400	11	34227	0	3prime_fragment	FALSE	canonical	3	38	junction_2	1.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTTTATCCTGTGTG	3367	False	NA	NA	False	NA	NA	NA	28005199	27970219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_27972970_27986884_27987214_28005044
tx.8599	chr17	-	3493	4	FSM	ENSMUSG00000056692.14	ENSMUST00000233508.2	1348	4	-114	-2031	0	0	multi-exon	FALSE	canonical	2	6	junction_1	17.3781471969828	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTTTATCCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	28039540	27970219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_27972970_28005044_28005243_28012882_28013038_28039150
tx.86	chr1	+	2219	11	FSM	ENSMUSG00000041809.6	ENSMUST00000038447.6	2146	11	-75	2	-13	-2	multi-exon	FALSE	canonical	3	9	junction_5	4.06939798987516	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGGTGCCTTATTTGG	NA	False	NA	NA	False	NA	NA	NA	21021836	21061063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
tx.860	chr1	+	4880	2	FSM	ENSMUSG00000041483.15	ENSMUST00000047734.15	4933	2	42	11	42	-11	multi-exon	FALSE	canonical	3	143	junction_1	0	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGAAGAAAGGAGATATC	NA	False	NA	NA	False	NA	NA	NA	136552680	136557780	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_136552790_136553009
tx.8600	chr17	+	737	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	24	-3	-24	0	multi-exon	FALSE	canonical	3	1664	junction_1	167.935225607971	491	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTCCCTGTCCCTTGCA	NA	False	NA	NA	False	NA	NA	NA	28059084	28070942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
tx.8601	chr17	+	8613	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	21	0	21	0	multi-exon	TRUE	canonical	3	66	junction_6	13.1601671721905	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	5806	False	NA	NA	False	NA	NA	NA	28075435	28119015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
tx.8602	chr17	+	8479	21	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	62	-3	intron_retention	FALSE	canonical	0	0	junction_12	22.4550105767065	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGCTCCTCGTGTGTCT	5847	False	NA	NA	False	NA	NA	NA	28075476	28119012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104964_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
tx.8603	chr17	+	6131	8	ISM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	30254	0	-3410	0	3prime_fragment	FALSE	canonical	3	83	junction_2	9.05087660654695	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	7651	False	NA	NA	False	NA	NA	NA	28105668	28119015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
tx.8604	chr17	+	4635	4	ISM	ENSMUSG00000039512.13	ENSMUST00000233409.2	594	5	-150	-2818	-150	0	intron_retention	FALSE	canonical	3	89	junction_1	8.48528137423857	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	28113518	28119015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_28113784_28114243_28114353_28114433_28114535_28114855
tx.8605	chr17	-	2709	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	-1487	-2	31	0	multi-exon	FALSE	canonical	3	141	junction_3	9.9373034571759	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGGGTTTCTCTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	28128185	28120099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
tx.8606	chr17	-	2175	6	NIC	ENSMUSG00000024218.14	novel	3457	6	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	59.2702286143727	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGGGTTTCTCTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	28128177	28120099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28127218_28127743
tx.8607	chr17	+	5819	25	FSM	ENSMUSG00000024219.17	ENSMUST00000114842.9	5819	25	-5	5	-5	-5	multi-exon	FALSE	canonical	2	10	junction_3	13.4574948139194	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCATAGCTCTGGGGTC	4234	False	NA	NA	False	NA	NA	NA	28128274	28281744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
tx.8608	chr17	+	5756	24	FSM	ENSMUSG00000024219.17	ENSMUST00000233525.2	5717	24	-28	-11	-1	-1	multi-exon	FALSE	canonical	3	31	junction_22	7.82125454670221	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCTCTGGGGTCTCTG	4238	False	NA	NA	False	NA	NA	NA	28128278	28281748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
tx.8609	chr17	+	5835	25	NIC	ENSMUSG00000024219.17	novel	5819	25	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	11.2395012740285	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCATAGCTCTGGGGTC	4254	False	NA	NA	False	NA	NA	NA	28128294	28281744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
tx.861	chr1	-	3952	4	ISM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	8610	-1705	-369	0	3prime_fragment	FALSE	canonical	3	51	junction_2	4.96655480858378	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAAATCCTTTATGTT	NA	False	NA	NA	False	NA	NA	NA	136868690	136770308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146
tx.8610	chr17	-	1917	9	ISM	ENSMUSG00000062859.16	ENSMUST00000042692.13	1989	10	280	6	216	0	3prime_fragment	FALSE	canonical	3	28	junction_6	7.37817728168685	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGACGGCCATTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	28299281	28285724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298895
tx.8611	chr17	-	1977	10	FSM	ENSMUSG00000062859.16	ENSMUST00000042692.13	1989	10	5	7	5	-1	multi-exon	FALSE	canonical	3	14	junction_9	11.2787355915107	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGACGGCCATTCTTCT	NA	False	NA	NA	False	NA	NA	NA	28299556	28285725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298895_28299280_28299493
tx.8612	chr17	-	1947	10	FSM	ENSMUSG00000062859.16	ENSMUST00000129046.9	1948	10	-3	4	-3	0	multi-exon	FALSE	canonical	3	11	junction_9	12.0349285902676	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGACGGCCATTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	28299580	28285724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298895_28299280_28299548
tx.8613	chr17	+	6923	22	FSM	ENSMUSG00000038677.15	ENSMUST00000043503.11	6876	22	-58	11	-58	-11	multi-exon	FALSE	canonical	3	23	junction_15	6.58693821908486	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTCCGAGGTCTAGCA	NA	False	NA	NA	False	NA	NA	NA	28361056	28393817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
tx.8614	chr17	+	6965	23	FSM	ENSMUSG00000038677.15	ENSMUST00000137147.9	3822	23	-432	-2711	-47	-6	multi-exon	FALSE	canonical	3	10	junction_6	8.92716163604273	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGAGGTCTAGCAAGCAT	NA	False	NA	NA	False	NA	NA	NA	28361067	28393822	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
tx.8615	chr17	+	3504	13	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	-21	0	intron_retention	FALSE	canonical	2	11	junction_4	22.4961416444885	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	False	NA	NA	False	NA	NA	NA	28396159	28424860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416724_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
tx.8616	chr17	+	2565	13	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	22.220486043289	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	False	NA	NA	False	NA	NA	NA	28396167	28424860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421408_28421573_28422059_28422225_28423428_28423543_28424084
tx.8617	chr17	+	2819	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	45	0	11	0	multi-exon	FALSE	canonical	3	64	junction_10	10.6092512939298	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	False	NA	NA	False	NA	NA	NA	28396147	28424860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
tx.8618	chr17	+	2233	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	38	6	-10	-6	multi-exon	FALSE	canonical	3	110	junction_2	14.7461859475595	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCTCCTGCCCTTCCC	NA	False	NA	NA	False	NA	NA	NA	28426789	28447576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
tx.8619	chr17	+	3233	8	FSM	ENSMUSG00000002250.17	ENSMUST00000002320.16	3277	8	42	2	-5	-2	multi-exon	FALSE	canonical	2	4	junction_5	2.32115382989599	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTAGCCATCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	28451715	28520446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28451839_28455985_28456070_28505234_28505442_28514314_28514470_28516059_28516199_28517250_28517454_28517557_28518009_28518575
tx.862	chr1	-	4957	9	NNC	ENSMUSG00000026398.15	novel	4733	9	NA	NA	601	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	15.8646619882051	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTAAATCCTTTATG	NA	False	NA	NA	False	NA	NA	NA	136880767	136770310	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136880319
tx.8620	chr17	+	1937	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	35.076478942448	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGGTGGCTCAGCCCT	327	False	NA	NA	False	NA	NA	NA	28532513	28545545	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
tx.8621	chr17	+	2001	10	FSM	ENSMUSG00000007570.17	ENSMUST00000114803.9	2025	10	21	3	-7	1	multi-exon	FALSE	canonical	3	100	junction_4	20.9655802580218	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTTGGTGGCTCAGCC	327	False	NA	NA	False	NA	NA	NA	28532513	28545543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
tx.8622	chr17	+	716	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	112	2	0	-1	multi-exon	FALSE	canonical	3	5482	junction_4	1458.64553610533	758	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	28547556	28550005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
tx.8623	chr17	-	3509	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	32	2	-24	1	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	1187	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATTGTTCATGGCTT	NA	False	NA	NA	False	NA	NA	NA	28705091	28618069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
tx.8624	chr17	-	2486	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	225	1942	-1	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	494	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	NA	False	NA	NA	NA	28841458	28808563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
tx.8625	chr17	-	2859	15	FSM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	3	1942	-1	0	multi-exon	FALSE	canonical	3	554	junction_1	84.536943982848	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	NA	False	NA	NA	NA	28841458	28808563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
tx.8626	chr17	+	3484	12	FSM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	64	0	-34	0	multi-exon	FALSE	canonical	3	310	junction_9	36.7805643969117	719	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5141	False	NA	NA	False	NA	NA	NA	28910379	28967379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
tx.8627	chr17	+	3483	12	FSM	ENSMUSG00000053436.16	ENSMUST00000004990.14	3562	12	78	1	-33	0	multi-exon	FALSE	canonical	3	53	junction_9	126.485422019579	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5142	False	NA	NA	False	NA	NA	NA	28910380	28967379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964131_28965244
tx.8628	chr17	+	1399	12	FSM	ENSMUSG00000004864.14	ENSMUST00000233984.2	2937	12	8	1530	8	199	multi-exon	FALSE	canonical	3	65	junction_6	12.7227264607489	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGCCCCTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	28988278	28997677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995157_28995275_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
tx.8629	chr17	+	1516	11	NIC	ENSMUSG00000004864.14	novel	2937	12	NA	NA	10	199	intron_retention	FALSE	canonical	3	77	junction_10	10.3580886267689	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGCCCCTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	28988280	28997677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
tx.863	chr1	-	4649	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	-4	-2889	-4	-3	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTTAAATCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	136881372	136770311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
tx.8630	chr17	+	5626	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15686	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	73.5222471999689	170	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	29004377	29057515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
tx.8631	chr17	+	5175	12	ISM	ENSMUSG00000063952.17	ENSMUST00000004985.11	7169	13	5153	1408	204	0	3prime_fragment	FALSE	canonical	0	0	junction_4	74.8308284904155	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	29025216	29057515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
tx.8632	chr17	-	4329	11	NIC	ENSMUSG00000048905.6	novel	4597	12	NA	NA	-4005	4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	3.26955654485436	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGGATCTTTTCAGGGA	NA	False	NA	NA	False	NA	NA	NA	29128679	29115361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_29117898_29118456_29118721_29120104_29120170_29120923_29121050_29121746_29121997_29122220_29122283_29123489_29123625_29124228_29124470_29124613_29124730_29127241_29127362_29128265
tx.8633	chr17	-	2762	2	ISM	ENSMUSG00000048905.6	ENSMUST00000062357.6	4597	12	15615	-3	5991	3	3prime_fragment	FALSE	canonical	3	14	junction_1	0	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCGGATCTTTTCAGGG	NA	False	NA	NA	False	NA	NA	NA	29118683	29115362	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_29117898_29118456
tx.8634	chr17	-	985	3	FSM	ENSMUSG00000045378.6	ENSMUST00000051526.6	1019	3	32	2	32	1	multi-exon	FALSE	canonical	3	18	junction_2	5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTCTGTGTGTCTCTT	6245	False	NA	NA	False	NA	NA	NA	29161206	29152959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_29153781_29160215_29160344_29161170
tx.8635	chr17	-	1503	3	NNC	ENSMUSG00000045378.6	novel	1019	3	NA	NA	65	-1	intron_retention	FALSE	canonical	2	3	junction_2	12.5	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTCCTCTGTGTGTCTC	6278	False	NA	NA	False	NA	NA	NA	29161173	29152961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_29153781_29160215_29160344_29160617
tx.8636	chr17	+	3828	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	25	0	-5	0	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	567	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	NA	NA	NA	29171420	29188523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
tx.8637	chr17	+	4001	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	195	0	1	0	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	NA	NA	NA	29171426	29188523	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
tx.8638	chr17	-	3316	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	30	5	0	-5	multi-exon	FALSE	canonical	3	678	junction_3	53.1740471465247	1508	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAACTGTGGTGGATTTCT	NA	False	NA	NA	False	NA	NA	NA	29226939	29189858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
tx.8639	chr17	+	2094	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	479	0	-3	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	1441	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAGTTGTGTCTAGAA	NA	False	NA	NA	False	NA	NA	NA	29251646	29261868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
tx.864	chr1	-	5072	7	FSM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	76	-1702	76	-3	multi-exon	FALSE	canonical	3	44	junction_6	7.84042232422605	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTTAAATCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	136877224	136770311	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459
tx.8640	chr17	+	1908	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	5	0	5	0	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	1266	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4652	False	NA	NA	False	NA	NA	NA	29312747	29319696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29312836_29317370_29317812_29318317
tx.8641	chr17	-	1683	3	ISM	ENSMUSG00000024008.17	ENSMUST00000126993.8	2332	12	23531	-30	-1067	30	3prime_fragment	FALSE	canonical	3	90	junction_1	5	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTGTTTGCCTAGCA	NA	False	NA	NA	False	NA	NA	NA	29379546	29376859	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_29378215_29378925_29379000_29379292
tx.8642	chr17	-	2064	9	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-7981	7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	34	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCCTCTCCTTTGAAA	9064	False	NA	NA	False	NA	NA	NA	29386460	29376882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29386382
tx.8643	chr17	-	2451	14	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-5012	5	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_8	10.3443664455472	114	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCCCCTCTCCTTTGA	3112	False	NA	NA	False	NA	NA	NA	29408089	29376884	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29408003
tx.8644	chr17	-	1200	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	237	25	-1	0	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	989	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGTCTAGTATTGTT	9926	False	NA	NA	False	NA	NA	NA	29482923	29469801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
tx.8645	chr17	+	1307	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	140	1365	3	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	451	False	NA	NA	False	NA	NA	NA	29487901	29520499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
tx.8646	chr17	+	1618	9	NNC	ENSMUSG00000052712.18	novel	1694	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	111.000492679087	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	467	False	NA	NA	False	NA	NA	NA	29487917	29520499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_29488304_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
tx.8647	chr17	+	866	7	NIC	ENSMUSG00000052712.18	novel	1073	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	129.043920171906	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	470	False	NA	NA	False	NA	NA	NA	29487920	29520499	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_29487977_29496830_29496922_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
tx.8648	chr17	-	1798	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	150	4	-14	0	multi-exon	FALSE	canonical	3	492	junction_4	200.604458475704	609	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	29566758	29551049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
tx.8649	chr17	-	1748	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	149	0	-15	0	multi-exon	FALSE	canonical	3	643	junction_4	160.665917948029	851	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	29566759	29551049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
tx.865	chr1	-	4025	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	-4	1237	-4	0	multi-exon	FALSE	canonical	3	136	junction_1	7.19739321808962	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGTATCTATCAGGTC	NA	False	NA	NA	False	NA	NA	NA	138547491	138411849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
tx.8650	chr17	+	2679	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	18	1	18	-1	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	3566	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTTTCCATTCAT	NA	False	NA	NA	False	NA	NA	NA	29709744	29715085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
tx.8651	chr17	+	2712	5	FSM	ENSMUSG00000024014.9	ENSMUST00000234294.2	1578	5	-468	-666	84	-1	multi-exon	FALSE	canonical	3	1677	junction_3	119.340636415263	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTTTCCATTCAT	NA	False	NA	NA	False	NA	NA	NA	29709810	29715085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
tx.8652	chr17	+	1994	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	75	3335	1	7	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	362	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTGGGCTTCGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	29833838	29860630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
tx.8653	chr17	+	3727	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	33	2620	7	0	multi-exon	TRUE	canonical	3	368	junction_15	33.7979652859003	747	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	29879601	29922333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
tx.8654	chr17	-	4601	5	FSM	ENSMUSG00000024018.19	ENSMUST00000129091.9	7117	5	5	2511	4	1604	multi-exon	FALSE	canonical	3	16	junction_1	115.181107391794	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGACTGAACTTGTTA	NA	False	NA	NA	False	NA	NA	NA	29935978	29914944	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_29919227_29923343_29923444_29924244_29924298_29924462_29924558_29935907
tx.8655	chr17	-	4713	5	NIC	ENSMUSG00000024018.19	novel	7117	5	NA	NA	4	1601	intron_retention	FALSE	canonical	3	10	junction_1	117.737791299141	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTGTGACTGAACTTG	NA	False	NA	NA	False	NA	NA	NA	29935978	29914947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_29919227_29923228_29923444_29924244_29924298_29924462_29924558_29935907
tx.8656	chr17	-	418	4	FSM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	40	939	4	142	multi-exon	FALSE	canonical	3	251	junction_3	23.9072281027215	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTGCTGACAAGGTGA	NA	False	NA	NA	False	NA	NA	NA	29935978	29923244	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_29923444_29924244_29924298_29924462_29924558_29935907
tx.8657	chr17	-	4196	17	FSM	ENSMUSG00000043557.17	ENSMUST00000171691.9	8425	17	122	4107	122	0	multi-exon	FALSE	canonical	0	0	junction_8	2.81666358481094	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCAGCACCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	30107560	30051029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_30051374_30051886_30051996_30052195_30052327_30056965_30057101_30057410_30057564_30058522_30058547_30058778_30058957_30059770_30059923_30061092_30061381_30061818_30062116_30065294_30065625_30068130_30068401_30068613_30068747_30069465_30069663_30071415_30071591_30076563_30076704_30106420
tx.8658	chr17	+	2719	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	317	3	-1	-1	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGATTGTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	30224023	30428993	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
tx.8659	chr17	-	4841	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	202	2015	-24	2	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAGTGTTTCATTCC	NA	False	NA	NA	False	NA	NA	NA	30795260	30436512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
tx.866	chr1	-	3962	9	NIC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	47.0649484754844	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTAGTATCTATCA	NA	False	NA	NA	False	NA	NA	NA	138547495	138411853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138471940_138472082_138489440_138489524_138547289
tx.8660	chr17	-	860	7	FSM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	37	-2	-10	2	multi-exon	FALSE	canonical	3	704	junction_1	947.318613537998	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTCTGGGCAGCAAGTC	NA	False	NA	NA	False	NA	NA	NA	30831596	30811837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
tx.8661	chr17	-	1906	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	31	7928	-16	2	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	2183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTCTGGGCAGCAAGTC	NA	False	NA	NA	False	NA	NA	NA	30831602	30811837	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
tx.8662	chr17	+	7723	41	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	9	85396	-8	1033	5prime_fragment	TRUE	canonical	3	31	junction_2	9.07689374180397	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCTGTTTGTAGGC	209	False	NA	NA	False	NA	NA	NA	30845918	30949891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054
tx.8664	chr17	+	3761	20	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	151410	-485	7433	485	3prime_fragment	TRUE	canonical	3	35	junction_2	13.9029082830091	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTCCCATATCTAGGT	4200	False	NA	NA	False	NA	NA	NA	31006139	31094723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
tx.8666	chr17	+	3612	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	9	2211	9	1289	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCATTTAATTTCAAG	NA	False	NA	NA	False	NA	NA	NA	31276669	31334751	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
tx.8667	chr17	+	2883	13	FSM	ENSMUSG00000042345.16	ENSMUST00000151620.9	2539	13	-27	-317	-27	317	multi-exon	FALSE	canonical	3	21	junction_1	6.05300659911163	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCGCTCAGGTCGTTT	NA	False	NA	NA	False	NA	NA	NA	31431059	31461381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31431206_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
tx.8668	chr17	+	2986	13	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	-2	317	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.05300659911163	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCGCTCAGGTCGTTT	NA	False	NA	NA	False	NA	NA	NA	31431084	31461381	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
tx.8669	chr17	-	1153	9	FSM	ENSMUSG00000024033.11	ENSMUST00000024832.9	1191	9	38	0	-7	0	multi-exon	FALSE	canonical	3	52	junction_8	7.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCTGATGTCGCTTC	NA	False	NA	NA	False	NA	NA	NA	31496319	31473992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31492498_31492613_31496175
tx.867	chr1	+	8260	22	FSM	ENSMUSG00000056268.16	ENSMUST00000168527.8	8206	22	-54	0	-54	0	multi-exon	TRUE	canonical	3	22	junction_7	13.1823079402048	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	NA	False	NA	NA	NA	138891392	139103781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
tx.8670	chr17	+	1365	2	Antisense	novelGene_ENSMUSG00000024033.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGTTGTAGTTGACC	6042	False	NA	NA	False	NA	NA	NA	31477086	31478650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_+_31477258_31477456
tx.8671	chr17	+	2766	20	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-44	14	combination_of_known_junctions	TRUE	canonical	3	25	junction_1	25.6401693159089	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	NA	NA	NA	31515133	31569683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_31515230_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
tx.8672	chr17	+	1014	3	ISM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	-13	43366	-2	-596	5prime_fragment	FALSE	canonical	3	118	junction_1	22.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGATCTTCCAACACA	NA	False	NA	NA	False	NA	NA	NA	31515175	31526335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_31515890_31519263_31519482_31526253
tx.8673	chr17	+	3384	20	FSM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	-13	18	-2	14	multi-exon	FALSE	canonical	3	70	junction_8	17.4641698891444	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	NA	NA	NA	31515175	31569683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
tx.8674	chr17	+	2060	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	19	10	19	2	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGAGTACAGGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	31605202	31695274	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
tx.8675	chr17	-	3699	11	NIC	ENSMUSG00000024037.14	novel	3633	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	140.848713164161	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACGTTGTCTCTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	31731262	31713296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728794_31728887_31729551_31729621_31731140
tx.8676	chr17	-	3757	11	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	142.866686109814	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACGTTGTCTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	31731269	31713297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728742_31728887_31729551_31729621_31731140
tx.8677	chr17	-	3691	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	457	6	-11	-5	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	484	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTACCACGTTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	31731268	31713301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
tx.8678	chr17	-	1890	11	FSM	ENSMUSG00000024037.14	ENSMUST00000172284.9	3633	11	-10	1753	-10	46	multi-exon	FALSE	canonical	3	14	junction_8	141.425033144772	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGTGTGTATGCTCTT	NA	False	NA	NA	False	NA	NA	NA	31731267	31715049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728794_31728887_31729551_31729621_31731140
tx.8679	chr17	+	1550	4	FSM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	27	5	-5	0	multi-exon	FALSE	canonical	3	77	junction_3	1707.19269237216	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTATGTGGTTATTTC	NA	False	NA	NA	False	NA	NA	NA	31739118	31750300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31739236_31740542_31740667_31746283_31747376_31750083
tx.868	chr1	+	8281	23	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-18	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	11.4355000396583	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	NA	False	NA	NA	False	NA	NA	NA	138891428	139103778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
tx.8680	chr17	+	458	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	30	5	-5	0	multi-exon	FALSE	canonical	3	3604	junction_2	48.5	514	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTATGTGGTTATTTC	NA	False	NA	NA	False	NA	NA	NA	31739118	31750300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31739236_31740542_31740667_31750083
tx.8681	chr17	+	4210	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	33	9	8	-9	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGGACGATTGATTCT	NA	False	NA	NA	False	NA	NA	NA	31783740	31826658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
tx.8682	chr17	+	4437	12	FSM	ENSMUSG00000006705.14	ENSMUST00000175806.9	2170	12	-75	-2192	-20	-9	multi-exon	FALSE	canonical	3	29	junction_2	48.0870422916989	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGGACGATTGATTCT	NA	False	NA	NA	False	NA	NA	NA	31783760	31826658	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
tx.8683	chr17	+	4185	11	FSM	ENSMUSG00000006705.14	ENSMUST00000237248.2	2014	11	-26	-2145	22	-17	multi-exon	FALSE	canonical	3	26	junction_5	40.2970222224918	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATGCCTTGTGGACGA	NA	False	NA	NA	False	NA	NA	NA	31783754	31826650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
tx.8684	chr17	-	2407	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	-5	1	-5	-1	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	271	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1940	False	NA	NA	False	NA	NA	NA	31856144	31831615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
tx.8685	chr17	-	2452	17	FSM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	26	3748	-8	-1	multi-exon	FALSE	canonical	3	120	junction_2	62.6156118212543	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1937	False	NA	NA	False	NA	NA	NA	31856147	31831615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
tx.8686	chr17	-	907	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	138	1	1	0	multi-exon	FALSE	canonical	3	4626	junction_6	706.208473585007	1769	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	31877728	31866055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
tx.8687	chr17	-	907	8	FSM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	15	1	1	0	multi-exon	FALSE	canonical	3	1007	junction_5	2353.82216310201	333	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	31877728	31866055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
tx.8688	chr17	-	3496	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-29	1054	-29	-1054	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATTTTTGTGTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	32074807	32064277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
tx.8689	chr17	-	1573	7	NIC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-8	161	combination_of_known_splicesites	FALSE	canonical	3	97	junction_4	419.803393136464	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCTGCCTGCACTCAT	NA	False	NA	NA	False	NA	NA	NA	32253490	32164894	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
tx.869	chr1	+	6853	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-69	-1574	intron_retention	TRUE	canonical	3	36	junction_4	7.92464510246358	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTCTGAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	139349956	139379169	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
tx.8690	chr17	-	1309	6	NIC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	514.177634675022	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGGGTTTAGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	32253493	32165057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_32165786_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
tx.8691	chr17	-	1461	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	18	0	-11	0	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	291	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	32253493	32165055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
tx.8692	chr17	-	1565	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-11	1313	-11	0	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	660	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	32253493	32165055	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
tx.8693	chr17	+	4556	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	181.227236431199	978	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	NA	False	NA	NA	NA	32255383	32281836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
tx.8694	chr17	+	4498	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	240.689124053975	53	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	NA	False	NA	NA	NA	32255383	32281836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
tx.8695	chr17	+	3413	4	ISM	ENSMUSG00000058392.14	ENSMUST00000147076.8	4487	13	8279	-6	645	-3	3prime_fragment	FALSE	canonical	3	619	junction_1	41.7372735094184	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	NA	False	NA	NA	NA	32275537	32281836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_32276231_32277497_32277639_32278247_32278312_32279321
tx.8696	chr17	-	8050	33	FSM	ENSMUSG00000038146.9	ENSMUST00000087723.5	8016	33	-38	4	-38	-4	multi-exon	TRUE	canonical	3	42	junction_20	15.8899720244404	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTGTCTGGTTTCTGTG	6001	False	NA	NA	False	NA	NA	NA	32385864	32339797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
tx.8697	chr17	-	2762	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	46	-1217	-40	327	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGGAGTTGTGAGGA	1040	False	NA	NA	False	NA	NA	NA	32408477	32402416	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
tx.8698	chr17	-	5827	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	48.2561838501388	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	NA	False	NA	NA	NA	32503702	32415247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
tx.8699	chr17	-	3706	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	22	3	-4	-1	multi-exon	FALSE	canonical	3	426	junction_6	74.0811964579343	701	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTGTGTTCATTAAT	NA	False	NA	NA	False	NA	NA	NA	32540137	32522648	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
tx.87	chr1	-	6501	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-13	4	-13	-4	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAATCTCTGATAGGCT	NA	False	NA	NA	False	NA	NA	NA	21149466	21066526	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
tx.870	chr1	+	8454	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	-104	11	-10	-11	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTAGTAAAGCACACCCA	NA	False	NA	NA	False	NA	NA	NA	139350015	139380732	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
tx.8700	chr17	-	3855	14	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	146.652106144734	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	NA	False	NA	NA	NA	32539660	32522649	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539431
tx.8701	chr17	-	3992	6	ISM	ENSMUSG00000024045.7	ENSMUST00000236267.2	1881	10	1949	-1018	1949	0	intron_retention	TRUE	canonical	3	540	junction_5	30.2562390260257	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	NA	False	NA	NA	NA	32532755	32522647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259
tx.8702	chr17	-	2088	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	14	0	2	0	multi-exon	TRUE	canonical	3	272	junction_6	38.0609912279546	198	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	NA	False	NA	NA	NA	32569567	32540397	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
tx.8703	chr17	-	3107	6	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	77.8870977762042	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGCAAACAGCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	32583441	32573032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32583155
tx.8704	chr17	-	3778	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	27.8384552703043	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGCAAACAGCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	32583437	32573032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32583155
tx.8705	chr17	-	4176	9	FSM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	-8	-590	-8	-2	multi-exon	FALSE	canonical	3	73	junction_5	52.6413276333339	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGCAAACAGCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	32583445	32573032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
tx.8706	chr17	+	4322	14	NNC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	-1561	1550	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	22.6347379252941	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTCATGTTTATGTGT	NA	False	NA	NA	False	NA	NA	NA	32670135	32713844	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_32670364_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
tx.8707	chr17	+	2604	14	FSM	ENSMUSG00000061126.6	ENSMUST00000237491.2	2618	14	-29	43	-29	3	multi-exon	FALSE	canonical	3	12	junction_1	21.761482720107	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGCTCCGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	32671667	32712251	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_32671771_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
tx.8708	chr17	+	1946	8	ISM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	13521	-792	3732	-3	3prime_fragment	FALSE	canonical	3	49	junction_7	8.14912039825809	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACAATTTGTGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	32700956	32712245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
tx.8709	chr17	+	2978	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	-11	-1274	-11	25	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAGGAGCAAAAAAGTATG	NA	False	NA	NA	False	NA	NA	NA	32725424	32749142	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
tx.871	chr1	+	9876	28	FSM	ENSMUSG00000033952.15	ENSMUST00000053364.12	9867	28	-10	1	-7	-1	multi-exon	TRUE	canonical	3	70	junction_14	22.9621266275417	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTGTGTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	139382502	139421828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
tx.8710	chr17	+	2887	12	NIC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-6	22	combination_of_known_splicesites	FALSE	canonical	2	7	junction_11	10.0297079380366	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTAGGAGCAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	32725429	32749139	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747690
tx.8711	chr17	+	2237	13	FSM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	4	1	4	0	multi-exon	TRUE	canonical	3	41	junction_1	14.6806278249036	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	32755535	32770771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
tx.8712	chr17	+	2232	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	-5	0	-5	0	multi-exon	FALSE	canonical	3	62	junction_12	10.7625895273086	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	32755537	32770771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
tx.8713	chr17	+	2079	12	NIC	ENSMUSG00000048440.17	novel	2227	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	20.9331876957963	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	NA	False	NA	NA	NA	32755544	32770770	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_32755630_32755971_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
tx.8714	chr17	-	10835	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	13	3	13	-3	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGTCTTTGGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	33007248	32984472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
tx.8715	chr17	-	2223	4	FSM	ENSMUSG00000055202.12	ENSMUST00000200914.5	3536	4	0	1313	0	417	multi-exon	FALSE	canonical	3	5	junction_3	3.09120616516523	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTAATTGATGAAGGAAGA	4484	False	NA	NA	False	NA	NA	NA	33028905	33015962	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33017848_33019360_33019422_33019785_33019913_33028755
tx.8716	chr17	-	4212	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	14	1786	-1	-1780	multi-exon	FALSE	canonical	3	24	junction_2	7.93025150224688	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCGTGTAATAAATCATA	NA	False	NA	NA	False	NA	NA	NA	33049221	33036208	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33040074_33040751_33040813_33041047_33041175_33049062
tx.8717	chr17	-	2533	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	24	2780	24	1863	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCCTTTGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	33110592	33100972	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
tx.8718	chr17	-	1745	13	FSM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	7	0	-3	0	multi-exon	FALSE	canonical	2	129	junction_12	13.5285192587117	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	NA	False	NA	NA	NA	33166369	33143661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
tx.8719	chr17	+	2354	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	0	22	0	-22	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTAATAAATTCCTTG	NA	False	NA	NA	False	NA	NA	NA	33184787	33198185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
tx.872	chr1	+	5161	11	ISM	ENSMUSG00000033952.15	ENSMUST00000053364.12	9867	28	23148	3	-5603	0	3prime_fragment	FALSE	canonical	3	111	junction_1	15.2318744742727	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGTGTGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	139405660	139421826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
tx.8720	chr17	+	2883	4	FSM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	-56	123	2	-123	multi-exon	FALSE	canonical	3	36	junction_3	3.55902608401044	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCAGTATACACTACATG	NA	False	NA	NA	False	NA	NA	NA	33212114	33224308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221731
tx.8721	chr17	+	2876	3	NIC	ENSMUSG00000053390.17	novel	2950	4	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTATGGTGATCGGTCTT	NA	False	NA	NA	False	NA	NA	NA	33212115	33224429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_33212233_33220931_33220993_33221731
tx.8722	chr17	-	3421	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	-3	-11	-3	11	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGATTTTTGTGTATGTG	2756	False	NA	NA	False	NA	NA	NA	33252379	33235825	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
tx.8723	chr17	+	6376	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	-5	-5613	-5	-34	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACCACTTAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33311426	33329645	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
tx.8724	chr17	-	3779	3	NIC	ENSMUSG00000094441.3	novel	3544	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	111	junction_2	3.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	33474117	33458691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_33461925_33462686_33463109_33473993
tx.8725	chr17	-	3540	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	4	0	4	0	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	33474115	33458691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
tx.8726	chr17	+	3235	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	3	2550	3	524	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCCTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	33508520	33523665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
tx.8727	chr17	+	3463	3	NIC	ENSMUSG00000096910.3	novel	5788	4	NA	NA	2	514	intron_retention	FALSE	canonical	3	48	junction_2	25	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATCTGAAAACTCATTC	NA	False	NA	NA	False	NA	NA	NA	33508519	33523655	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_33508644_33519554_33519977_33520738
tx.8728	chr17	+	5608	3	ISM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	11089	2	-1728	-2	3prime_fragment	FALSE	canonical	3	48	junction_2	20.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	33519606	33526213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_33519682_33519918_33519977_33520738
tx.8729	chr17	-	6936	7	Fusion	ENSMUSG00000003929.12_ENSMUSG00000055240.18	novel	812	5	NA	NA	-5	-5	multi-exon	FALSE	canonical	2	3	junction_4	18.1421853393931	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTCTGTTGGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	33613584	33548320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33605395_33605442_33605658_33605786_33613461
tx.873	chr1	-	6210	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	73	5303	73	2058	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	481	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTTGGGTCAGACTTCT	NA	False	NA	NA	False	NA	NA	NA	143578558	143479840	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
tx.8730	chr17	-	4673	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	4	1962	0	-1962	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGCACCTTGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	33577848	33550277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
tx.8731	chr17	-	4146	5	FSM	ENSMUSG00000003929.12	ENSMUST00000235063.2	812	5	2	-3336	2	2399	multi-exon	FALSE	canonical	2	6	junction_3	15.2540978100968	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCAAACCATGTGT	NA	False	NA	NA	False	NA	NA	NA	33577840	33550947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33577707
tx.8732	chr17	-	2688	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	22	-51	4	51	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	33613593	33599177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
tx.8733	chr17	+	2644	16	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	2761	2	2761	0	3prime_fragment	FALSE	canonical	1	1	junction_1	23.8854674552447	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAAGTAAATTACTGAG	NA	False	NA	NA	False	NA	NA	NA	33804337	33826736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_33804654_33805089_33805258_33807076_33807163_33809801_33809884_33811894_33812002_33812994_33813094_33813196_33813342_33816914_33817030_33817116_33817287_33820024_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
tx.8734	chr17	+	2379	15	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	3462	2	3462	0	3prime_fragment	FALSE	canonical	1	4	junction_4	23.6147869620987	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAAGTAAATTACTGAG	NA	False	NA	NA	False	NA	NA	NA	33805038	33826736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_33805258_33807076_33807163_33809801_33809884_33811894_33812002_33812994_33813094_33813196_33813342_33816914_33817030_33817116_33817287_33820024_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
tx.8735	chr17	+	1303	7	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	18501	2	2963	0	3prime_fragment	FALSE	canonical	3	43	junction_3	8.43932593411478	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAAGTAAATTACTGAG	2227	False	NA	NA	False	NA	NA	NA	33820077	33826736	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
tx.8736	chr17	-	1189	3	ISM	ENSMUSG00000059208.16	ENSMUST00000087582.13	2370	17	35112	-3	-620	0	3prime_fragment	FALSE	canonical	3	1945	junction_2	124.5	40	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	33869281	33865209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_33865634_33867786_33867839_33868568
tx.8737	chr17	-	2349	16	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	491.668786436108	1786	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5756	False	NA	NA	False	NA	NA	NA	33904377	33865209	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
tx.8738	chr17	-	5842	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	-39	-4259	-39	-7	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCATTTTTGTCATGA	NA	False	NA	NA	False	NA	NA	NA	33979319	33961464	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
tx.8739	chr17	-	1810	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	185	4114	-39	152	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	413	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCAGCTTCTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	33979319	33965571	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
tx.874	chr1	+	3487	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	-52	-2855	-3	-45	multi-exon	FALSE	canonical	3	64	junction_1	245.711664806989	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	143615300	143625369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
tx.8740	chr17	-	1689	4	ISM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	10326	-151	-135	151	3prime_fragment	FALSE	canonical	3	562	junction_1	29.3295452099452	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCAGCTTCTGTCTT	9902	False	NA	NA	False	NA	NA	NA	33968954	33965572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755
tx.8741	chr17	+	928	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	-6	3	-6	-3	multi-exon	FALSE	canonical	3	20	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTCTCTGATTTCATT	3471	False	NA	NA	False	NA	NA	NA	33978959	33980841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_33979562_33980515
tx.8742	chr17	-	191	2	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTCACCCTTTCCTCTC	9913	False	NA	NA	False	NA	NA	NA	34111103	34019101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_34019148_34110958
tx.8743	chr17	+	2936	10	ISM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	3	1	0	0	intron_retention	FALSE	canonical	3	204	junction_2	55.0900497390129	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	NA	False	NA	NA	NA	34029496	34041891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259
tx.8744	chr17	+	2637	11	FSM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	3	1	0	0	multi-exon	FALSE	canonical	3	204	junction_2	56.7176339421877	223	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	NA	False	NA	NA	NA	34029496	34041891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
tx.8745	chr17	+	3583	10	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	238	junction_1	47.8789626216817	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	NA	False	NA	NA	NA	34029496	34041889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
tx.8746	chr17	+	2655	11	FSM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	0	-3	0	0	multi-exon	FALSE	canonical	3	16	junction_2	101.139952541021	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	NA	False	NA	NA	NA	34029496	34041891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34029540_34035159_34035238_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
tx.8747	chr17	+	783	6	FSM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	124.071592236096	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	NA	False	NA	NA	NA	34029496	34041891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34029540_34035159_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
tx.8748	chr17	+	1984	9	ISM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	7221	-3	-163	0	3prime_fragment	FALSE	canonical	3	265	junction_4	41.1868835310466	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	4356	False	NA	NA	False	NA	NA	NA	34036717	34041891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
tx.8749	chr17	-	315	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	67	0	-1	0	multi-exon	FALSE	canonical	3	11527	junction_1	4307.03060897722	1676	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	NA	False	NA	NA	NA	34043469	34042023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
tx.875	chr1	+	3533	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	32	-228	-21	-47	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143615326	143625367	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
tx.8750	chr17	+	484	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	36	8	4	0	multi-exon	FALSE	canonical	3	7458	junction_2	513.174650798558	1064	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4110	False	NA	NA	False	NA	NA	NA	34043581	34057283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
tx.8751	chr17	+	1177	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	11	1021	-1	0	multi-exon	FALSE	canonical	3	326	junction_3	13.0072095393286	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7004	False	NA	NA	False	NA	NA	NA	34062075	34067727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
tx.8752	chr17	-	1293	5	ISM	ENSMUSG00000079553.12	ENSMUST00000114361.9	2260	12	6887	-2	-520	2	3prime_fragment	FALSE	canonical	1	168	junction_4	197.639191457565	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCTTGTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	34102720	34094639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072
tx.8753	chr17	-	2322	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	28	7	0	2	multi-exon	FALSE	canonical	1	168	junction_4	135.039586788467	619	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCTTGTTTGTTTTG	9721	False	NA	NA	False	NA	NA	NA	34109607	34094639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
tx.8754	chr17	+	2511	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	69	1	16	-1	multi-exon	FALSE	canonical	3	546	junction_5	66.597787546753	842	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5638	False	NA	NA	False	NA	NA	NA	34128487	34134563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
tx.8755	chr17	+	2626	7	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	18	0	intron_retention	FALSE	canonical	3	546	junction_5	71.9320667173009	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5640	False	NA	NA	False	NA	NA	NA	34128489	34134564	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
tx.8756	chr17	+	2598	2	FSM	ENSMUSG00000051390.11	ENSMUST00000053429.11	2612	2	14	0	14	0	multi-exon	FALSE	canonical	3	107	junction_1	0	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCAACACCCCT	NA	False	NA	NA	False	NA	NA	NA	34135158	34138299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34135248_34135790
tx.8757	chr17	+	2729	8	FSM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	168	1	-12	0	multi-exon	FALSE	canonical	3	116	junction_6	36.6951033823983	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGGGCCTCTCATTCTCC	460	False	NA	NA	False	NA	NA	NA	34138473	34148265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
tx.8758	chr17	+	2677	8	FSM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	-89	1	36	-1	multi-exon	FALSE	canonical	3	105	junction_6	40.4101421902563	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	508	False	NA	NA	False	NA	NA	NA	34138521	34148264	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
tx.8759	chr17	+	3274	18	FSM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	-22	0	17	0	multi-exon	FALSE	canonical	3	51	junction_2	23.5177912481234	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3212	False	NA	NA	False	NA	NA	NA	34148533	34156661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
tx.876	chr1	-	3926	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	30	4782	30	276	multi-exon	FALSE	canonical	3	15	junction_2	6.34428877022476	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCAACAGATAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	143652776	143631309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
tx.8760	chr17	+	2781	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6331294599435	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	4534	False	NA	NA	False	NA	NA	NA	34149855	34156661	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
tx.8761	chr17	+	3263	12	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-328	-2	intron_retention	FALSE	canonical	3	99	junction_2	12.8930758532895	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	5376	False	NA	NA	False	NA	NA	NA	34150697	34156659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
tx.8762	chr17	-	696	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	13	98	0	0	multi-exon	FALSE	canonical	3	1067	junction_1	64.8194072447099	225	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTTTACAGCCAGTCT	NA	False	NA	NA	False	NA	NA	NA	34159304	34157892	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
tx.8763	chr17	+	2210	15	FSM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	17	2	17	-2	multi-exon	FALSE	canonical	3	240	junction_8	25.4498305996527	327	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTCTGGACCATCCTG	1996	False	NA	NA	False	NA	NA	NA	34159650	34168669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
tx.8764	chr17	+	2361	15	NNC	ENSMUSG00000024312.11	novel	2229	15	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_9	68.8412844808956	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTCTGGACCATCCTG	2000	False	NA	NA	False	NA	NA	NA	34159654	34168669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163300_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
tx.8765	chr17	-	2094	3	FSM	ENSMUSG00000008668.16	ENSMUST00000174758.8	499	3	-1596	1	205	0	multi-exon	FALSE	canonical	3	21077	junction_1	1139	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	34173259	34170973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34171093_34171194_34171287_34171376
tx.8766	chr17	-	545	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	14	1	0	0	multi-exon	FALSE	canonical	3	20050	junction_4	1387.25833481007	3376	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	34174637	34170973	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
tx.8767	chr17	+	2776	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	66	541	-37	521	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	377	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTGTCCTCTCCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	34174851	34185468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
tx.8768	chr17	-	1474	6	NNC	ENSMUSG00000067203.9	novel	1052	6	NA	NA	-18	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.338094023943	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTCACTATGCTGT	3663	False	NA	NA	False	NA	NA	NA	34197782	34193614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_34194054_34194455_34194588_34194714_34194990_34196744_34197021_34197227_34197498_34197700
tx.8769	chr17	-	1567	5	FSM	ENSMUSG00000067203.9	ENSMUST00000235582.2	1567	5	18	-18	18	18	multi-exon	FALSE	canonical	3	8	junction_3	6.10327780786685	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTCACTATGCTGT	3662	False	NA	NA	False	NA	NA	NA	34197783	34193614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34194054_34194470_34194588_34194714_34194990_34196844_34197498_34197700
tx.877	chr1	+	1323	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	5	368	1	-4	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTAAACTCCATTCTTCA	NA	False	NA	NA	False	NA	NA	NA	143653014	143682675	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
tx.8770	chr17	-	1589	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	65	-35	-1	0	multi-exon	FALSE	canonical	3	30	junction_6	28.3196045170126	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTATGCTGTGTGTATCT	NA	False	NA	NA	False	NA	NA	NA	34219256	34214991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
tx.8771	chr17	-	1561	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	7	2	-1	-1	multi-exon	FALSE	canonical	3	30	junction_6	28.0698836361489	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTATGCTGTGTGTATC	NA	False	NA	NA	False	NA	NA	NA	34219256	34214992	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
tx.8772	chr17	-	1808	6	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	25	292	-3	0	intron_retention	FALSE	canonical	3	63	junction_3	8.8090862182181	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34243629	34240057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262
tx.8773	chr17	-	2011	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	78	junction_2	4.01995024844836	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34243630	34240057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_34240458_34240656_34240931_34241269_34242169_34242266_34242428_34243262_34243393_34243483
tx.8774	chr17	-	1719	7	FSM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	23	292	-5	0	multi-exon	FALSE	canonical	3	63	junction_3	8.5764535535124	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34243631	34240057	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
tx.8775	chr17	-	975	9	FSM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-10	0	-6	0	multi-exon	FALSE	canonical	3	92	junction_8	37.2237743250198	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	34247040	34245006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
tx.8776	chr17	-	2473	6	FSM	ENSMUSG00000024327.17	ENSMUST00000170491.8	2433	6	-39	-1	-5	1	multi-exon	FALSE	canonical	3	568	junction_4	31.8282893036996	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	34250661	34247245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
tx.8777	chr17	-	2384	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-67	3	-5	1	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	720	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	34250661	34247245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
tx.8778	chr17	-	1662	7	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	218.983763984659	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	34250663	34247245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250521
tx.8779	chr17	+	2630	10	FSM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	-53	0	-13	0	multi-exon	FALSE	canonical	3	122	junction_7	37.5838157971825	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	False	NA	NA	False	NA	NA	NA	34250772	34257373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
tx.878	chr1	+	1324	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	-4	525	1	0	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	False	NA	NA	False	NA	NA	NA	143653014	143682679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
tx.8780	chr17	-	4607	13	FSM	ENSMUSG00000024335.21	ENSMUST00000025193.14	4657	13	43	7	43	0	multi-exon	FALSE	canonical	3	100	junction_12	100.678634774216	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6137	False	NA	NA	False	NA	NA	NA	34341531	34331003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
tx.8781	chr17	-	2879	11	ISM	ENSMUSG00000024335.21	ENSMUST00000095347.13	2617	12	1315	-333	21	0	3prime_fragment	TRUE	canonical	3	318	junction_10	52.9812230889397	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	8427	False	NA	NA	False	NA	NA	NA	34336148	34331003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881
tx.8782	chr17	-	3737	13	ISM	ENSMUSG00000024335.21	ENSMUST00000154232.9	4520	14	1077	0	-845	0	3prime_fragment	FALSE	canonical	3	88	junction_10	131.526586877162	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	9360	False	NA	NA	False	NA	NA	NA	34338308	34331003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579
tx.8783	chr17	-	3644	12	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	2414	7	-844	0	3prime_fragment	FALSE	canonical	3	318	junction_10	50.8649158990899	436	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	9361	False	NA	NA	False	NA	NA	NA	34338307	34331003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
tx.8784	chr17	-	4743	14	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	88	junction_10	145.754555786584	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6093	False	NA	NA	False	NA	NA	NA	34341575	34331003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
tx.8785	chr17	+	1124	5	FSM	ENSMUSG00000037649.11	ENSMUST00000236322.2	1108	5	-34	18	-34	4	multi-exon	FALSE	canonical	3	37	junction_1	3.83242742918897	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGACCTCTCCCTCCAC	6764	False	NA	NA	False	NA	NA	NA	34354567	34358056	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34354733_34356087_34356373_34356876_34357156_34357380_34357510_34357790
tx.8786	chr17	+	1288	6	FSM	ENSMUSG00000079547.5	ENSMUST00000114232.4	1404	6	109	7	109	-7	multi-exon	FALSE	canonical	3	11	junction_3	6.61513416341649	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCCCAAGTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	34372154	34379197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34372428_34374406_34374689_34376219_34376505_34378317_34378435_34378602_34378639_34378902
tx.8787	chr17	+	3003	11	FSM	ENSMUSG00000037321.18	ENSMUST00000170086.8	2953	11	-54	4	-54	1	multi-exon	FALSE	canonical	0	0	junction_8	3.91024295920343	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTTCTCCCGTTTCTT	6937	False	NA	NA	False	NA	NA	NA	34406472	34416195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34407380_34408151_34408267_34408403_34408535_34409536_34409743_34410302_34410501_34411810_34411940_34412101_34412291_34412458_34412633_34412854_34413018_34413817_34413955_34415541
tx.8788	chr17	+	2478	12	FSM	ENSMUSG00000024339.13	ENSMUST00000025197.6	3442	12	958	6	-82	-3	multi-exon	FALSE	canonical	1	1	junction_4	2.62221910942836	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAATGTATGTTATGGTT	6104	False	NA	NA	False	NA	NA	NA	34423458	34435289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34423598_34424260_34424759_34424843_34424959_34427727_34427859_34428063_34428270_34430843_34431042_34431203_34431333_34432988_34433178_34433296_34433471_34433619_34433780_34434307_34434445_34434887
tx.8789	chr17	+	1221	6	FSM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	-16	7	-16	2	multi-exon	FALSE	canonical	3	16	junction_1	17.3735431043872	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTGGCTTTGATA	NA	False	NA	NA	False	NA	NA	NA	34482166	34488386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34482380_34483734_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
tx.879	chr1	-	2936	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	331	6	-1	2	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATGTGGAATTTTAAA	964	False	NA	NA	False	NA	NA	NA	150268500	150237061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
tx.8790	chr17	+	1189	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	5	475	5	0	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	34524845	34535173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
tx.8791	chr17	+	3762	4	ISM	ENSMUSG00000062638.12	ENSMUST00000080254.7	2113	10	5102	-2913	4348	2913	3prime_fragment	FALSE	canonical	2	4	junction_1	3.29983164553722	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTTATAGACTTTG	2761	False	NA	NA	False	NA	NA	NA	34601207	34607915	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_34601242_34601435_34601463_34603334_34603362_34604241
tx.8792	chr17	+	6543	30	FSM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	43	5	13	-5	multi-exon	TRUE	canonical	3	55	junction_11	11.3350235386032	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTTCTGAGGGACTA	NA	False	NA	NA	False	NA	NA	NA	34783284	34807472	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
tx.8793	chr17	+	3076	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	-7	-1	-7	1	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTTGAGATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34811229	34816375	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
tx.8794	chr17	+	2017	5	ISM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	2347	-2	-850	2	3prime_fragment	FALSE	canonical	3	29	junction_1	2.38484800354236	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGAGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34813583	34816376	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
tx.8795	chr17	-	1133	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	99	6	70	-6	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	477	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAAGTCTCCCCAGTC	894	False	NA	NA	False	NA	NA	NA	34822565	34820070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
tx.8796	chr17	+	2140	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	27	23	27	8	multi-exon	FALSE	canonical	3	118	junction_1	5.07991688470939	184	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCGGCCTGTTGTACT	NA	False	NA	NA	False	NA	NA	NA	34824861	34832400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
tx.8797	chr17	-	1791	8	FSM	ENSMUSG00000015474.17	ENSMUST00000171376.8	1750	8	-40	-1	-38	0	multi-exon	TRUE	canonical	3	52	junction_2	8.14160391358572	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	4177	False	NA	NA	False	NA	NA	NA	34846162	34835636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778
tx.8798	chr17	-	1713	9	NIC	ENSMUSG00000015474.17	novel	1710	9	NA	NA	-194	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_8	19.4148783153539	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGCTTGGCTTATTCC	9879	False	NA	NA	False	NA	NA	NA	34847207	34835637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34847091
tx.8799	chr17	-	1782	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	-74	2	16	0	multi-exon	FALSE	canonical	3	52	junction_2	7.8700381193486	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGCTTGGCTTATTCC	3856	False	NA	NA	False	NA	NA	NA	34846483	34835637	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
tx.88	chr1	+	1138	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	30	0	30	0	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTCATTCATTTCTAT	NA	False	NA	NA	False	NA	NA	NA	21288828	21300391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
tx.880	chr1	-	2899	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.9368170945323	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATGTGGAATTTTAAA	963	False	NA	NA	False	NA	NA	NA	150268501	150237061	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
tx.8800	chr17	+	1217	2	FSM	ENSMUSG00000033739.9	ENSMUST00000036720.9	1270	2	54	-1	-23	1	multi-exon	FALSE	canonical	3	34	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGTCTGTGTTGTGG	7413	False	NA	NA	False	NA	NA	NA	34863791	34865299	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34863928_34864218
tx.8801	chr17	+	2515	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	51	0	-4	0	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	506	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9792	False	NA	NA	False	NA	NA	NA	34866170	34874048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
tx.8802	chr17	-	1105	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	15	0	-3	0	multi-exon	FALSE	canonical	3	81	junction_1	4.59770474137791	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5588	False	NA	NA	False	NA	NA	NA	35055906	35042968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
tx.8803	chr17	+	1832	4	NIC	ENSMUSG00000040482.17	novel	701	5	NA	NA	24	-2	intron_retention	FALSE	canonical	3	152	junction_1	15.4560308258262	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTTGCTGTGTCTGAA	3000	False	NA	NA	False	NA	NA	NA	35056018	35058160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35057422_35057523_35057660_35057788_35057884_35057962
tx.8804	chr17	+	1435	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	11	1	11	-1	multi-exon	FALSE	canonical	3	133	junction_1	19.7434940057619	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCTGTGTCTGAAT	2987	False	NA	NA	False	NA	NA	NA	35056005	35058161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
tx.8805	chr17	+	1509	6	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	24	-3	intron_retention	FALSE	canonical	3	133	junction_1	20.3115730557729	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTCTTGCTGTGTCTGA	3000	False	NA	NA	False	NA	NA	NA	35056018	35058159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35056193_35056368_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
tx.8806	chr17	+	1599	6	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	24	0	intron_retention	FALSE	canonical	3	143	junction_2	17.7696370249929	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	3000	False	NA	NA	False	NA	NA	NA	35056018	35058162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
tx.8807	chr17	+	1448	7	FSM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	24	47	24	0	multi-exon	FALSE	canonical	3	41	junction_1	48.3439643480847	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	3000	False	NA	NA	False	NA	NA	NA	35056018	35058162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35056218_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
tx.8808	chr17	-	3944	28	FSM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	7	0	-5	0	multi-exon	FALSE	canonical	3	88	junction_20	16.8071446039882	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGAGTATGGTAACT	5312	False	NA	NA	False	NA	NA	NA	35069179	35058219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
tx.8809	chr17	+	1403	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	-23	1	-6	-1	multi-exon	TRUE	canonical	3	201	junction_1	101.735146335964	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTATTGTAACTGCTT	26	False	NA	NA	False	NA	NA	NA	35069360	35075347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
tx.881	chr1	+	7425	51	FSM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	52	3	52	3	multi-exon	TRUE	canonical	3	414	junction_6	73.7537117710017	466	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	NA	False	NA	NA	NA	150269052	150325683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
tx.8810	chr17	+	1504	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	12	-117	2	-1	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTATTGTAACTGCTT	6	True	NA	NA	False	NA	NA	NA	35069385	35075347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
tx.8811	chr17	+	1815	10	NIC	ENSMUSG00000024369.17	novel	1607	11	NA	NA	13	-1	intron_retention	FALSE	canonical	3	434	junction_4	41.3533404386163	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTATTGTAACTGCTT	17	False	NA	NA	False	NA	NA	NA	35069396	35075347	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
tx.8812	chr17	+	1590	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	33	-16	16	13	multi-exon	FALSE	canonical	3	52	junction_1	144.013228559046	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTAATCTGTCCTCAC	20	False	NA	NA	False	NA	NA	NA	35069399	35075361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
tx.8813	chr17	+	3903	28	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_14	98.9641965990974	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	6675	False	NA	NA	False	NA	NA	NA	35117449	35133023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
tx.8814	chr17	+	3768	27	FSM	ENSMUSG00000013787.16	ENSMUST00000078061.13	3746	27	-22	0	8	0	multi-exon	TRUE	canonical	3	123	junction_9	83.6524314646073	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	6678	False	NA	NA	False	NA	NA	NA	35117452	35133023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
tx.8815	chr17	+	3870	28	FSM	ENSMUSG00000013787.16	ENSMUST00000114033.9	3882	28	8	4	8	0	multi-exon	FALSE	canonical	3	141	junction_1	79.9703820344975	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	6678	False	NA	NA	False	NA	NA	NA	35117452	35133023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
tx.8816	chr17	+	4028	27	FSM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	-6	4	-6	0	multi-exon	FALSE	canonical	3	188	junction_9	70.6987525311972	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	7166	False	NA	NA	False	NA	NA	NA	35117940	35133023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
tx.8817	chr17	+	3926	26	FSM	ENSMUSG00000013787.16	ENSMUST00000097342.10	3934	26	11	-3	-6	0	multi-exon	FALSE	canonical	3	123	junction_8	74.3555135817109	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	7166	False	NA	NA	False	NA	NA	NA	35117940	35133023	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
tx.8818	chr17	+	2994	5	FSM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	-7	632	-7	-600	multi-exon	FALSE	canonical	3	117	junction_3	25.7001945517928	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	7977	False	NA	NA	False	NA	NA	NA	35150282	35154297	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35150524_35150891_35151085_35151541_35153162_35153258_35153482_35153580
tx.8819	chr17	+	2404	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	70	0	9	0	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	7993	False	NA	NA	False	NA	NA	NA	35150298	35154897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
tx.882	chr1	+	3427	9	NNC	ENSMUSG00000097426.2	novel	899	2	NA	NA	-20989	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.10653744329409	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTCCTCCCCAACTTGC	NA	False	NA	NA	False	NA	NA	NA	150991268	151013278	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_150991417_150992532_150992672_150993087_150993230_150994498_150994620_150995412_150995495_151003568_151003770_151008596_151008898_151009625_151010396_151011755
tx.8820	chr17	-	535	4	FSM	ENSMUSG00000092203.8	ENSMUST00000174714.8	520	4	-9	-6	-1	3	multi-exon	FALSE	canonical	3	5	junction_2	75.5439533575579	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6021	False	NA	NA	False	NA	NA	NA	35171433	35169210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35169452_35169673_35169824_35171111_35171150_35171327
tx.8821	chr17	-	587	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	0	-8	0	3	multi-exon	FALSE	canonical	3	94	junction_4	37.0497975702972	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	NA	NA	NA	35171444	35169210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
tx.8822	chr17	-	554	2	FSM	ENSMUSG00000092203.8	ENSMUST00000174464.2	785	2	228	3	228	0	multi-exon	FALSE	canonical	3	190	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	7462	False	NA	NA	False	NA	NA	NA	35169992	35169216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35169452_35169673
tx.8823	chr17	+	865	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	-25	0	-7	0	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	76	False	NA	NA	False	NA	NA	NA	35200830	35204867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
tx.8824	chr17	+	880	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	-9	2	-1	0	multi-exon	FALSE	canonical	3	278	junction_1	596.250995806296	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGGTTTGTCGTCTG	234	False	NA	NA	False	NA	NA	NA	35201095	35204865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
tx.8825	chr17	-	3044	3	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	15	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	NA	False	NA	NA	False	NA	NA	NA	35219808	35215700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_35218446_35218974_35219185_35219719
tx.8826	chr17	-	2933	2	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	307	junction_1	0	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	273	False	NA	NA	False	NA	NA	NA	35219330	35215700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_35218446_35219142
tx.8827	chr17	-	2857	3	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	153.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	NA	False	NA	NA	False	NA	NA	NA	35219792	35215700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_35218446_35219142_35219182_35219719
tx.8828	chr17	-	2888	3	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	153.5	428	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	NA	False	NA	NA	False	NA	NA	NA	35219820	35215700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_35218446_35219142_35219185_35219719
tx.8829	chr17	-	3595	2	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	NA	False	NA	NA	False	NA	NA	NA	35219830	35215700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_35219185_35219719
tx.883	chr1	+	3485	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	19	7	-13	0	multi-exon	TRUE	canonical	3	1145	junction_2	98.7764172879585	1995	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	NA	False	NA	NA	NA	151220246	151240166	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
tx.8830	chr17	+	4088	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	53	-4	-11	4	multi-exon	TRUE	canonical	0	0	junction_12	417.564149877336	2346	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9527	False	NA	NA	False	NA	NA	NA	35220015	35235302	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
tx.8831	chr17	+	1179	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	265	22	265	-22	multi-exon	TRUE	canonical	3	1084	junction_1	70.1524055182714	509	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTGTTGTTTTTACACA	1941	False	NA	NA	False	NA	NA	NA	35269206	35277703	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
tx.8832	chr17	+	1259	7	FSM	ENSMUSG00000007039.13	ENSMUST00000174493.8	1254	7	-7	2	-7	2	multi-exon	FALSE	canonical	3	26	junction_6	164.014989152415	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGTGACTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	35278069	35281069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280576_35280766
tx.8833	chr17	+	1306	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	38	-2	-28	2	multi-exon	FALSE	canonical	3	393	junction_1	36.6488593122472	280	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGTGACTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	35278048	35281069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
tx.8834	chr17	+	2131	6	NIC	ENSMUSG00000007039.13	novel	1342	7	NA	NA	-21	0	intron_retention	FALSE	canonical	3	436	junction_2	25.772853935876	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	NA	False	NA	NA	NA	35278055	35281071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
tx.8835	chr17	+	1040	4	NIC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-40	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	215.629826838084	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTAAGAGAGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	35295837	35297778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35295936_35296110_35296183_35296812_35296939_35297034
tx.8836	chr17	+	1077	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172678.8	750	4	-75	-252	-46	-2	multi-exon	FALSE	canonical	3	186	junction_1	129.208702837266	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTAAGAGAGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	35295831	35297778	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35295967_35296110_35296183_35296812_35296939_35297034
tx.8837	chr17	+	1206	3	FSM	ENSMUSG00000013766.12	ENSMUST00000013910.5	1142	3	-65	1	-30	-1	multi-exon	FALSE	canonical	3	419	junction_2	34.5	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTAAGAGAGCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	35295847	35297779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35296183_35296812_35296939_35297034
tx.8838	chr17	+	1979	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	-34	0	-6	0	multi-exon	FALSE	canonical	3	106	junction_5	22.1293102285439	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	NA	False	NA	NA	NA	35308232	35321963	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
tx.8839	chr17	+	2176	21	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	48.0332176727731	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	NA	False	NA	NA	NA	35308222	35321961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35310794_35310984_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
tx.884	chr1	+	2795	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	-12	0	-12	0	multi-exon	FALSE	canonical	3	234	junction_7	396.626282743927	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGTCTGTAGCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	151220247	151232550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
tx.8840	chr17	-	944	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	17	0	17	0	multi-exon	FALSE	canonical	3	826	junction_1	47.9780042195264	354	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	NA	False	NA	NA	NA	35340245	35335173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
tx.8841	chr17	+	1270	3	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4590	False	NA	NA	False	NA	NA	NA	35340459	35343791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35340527_35342028_35342636_35343195
tx.8842	chr17	+	1513	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	6	-1	6	1	multi-exon	FALSE	canonical	3	45	junction_1	21.5	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4595	False	NA	NA	False	NA	NA	NA	35340464	35343791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35340775_35342028_35342636_35343195
tx.8843	chr17	+	2762	2	FSM	ENSMUSG00000092417.4	ENSMUST00000052167.9	1295	2	-1458	-9	11	1	multi-exon	FALSE	canonical	3	88	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4600	False	NA	NA	False	NA	NA	NA	35340469	35343791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35342636_35343195
tx.8844	chr17	+	3924	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	434	junction_1	113.385261828864	336	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	8518	False	NA	NA	False	NA	NA	NA	35354183	35366289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
tx.8845	chr17	+	3784	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	156.645809781884	63	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTCGAGTACCTTTT	8515	False	NA	NA	False	NA	NA	NA	35354180	35366293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
tx.8846	chr17	+	3825	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	147.653539437202	82	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8515	False	NA	NA	False	NA	NA	NA	35354180	35366295	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
tx.8847	chr17	+	3806	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	346	junction_1	122.303229720233	216	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTCGAGTACCTTTTC	8798	False	NA	NA	False	NA	NA	NA	35354463	35366294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
tx.8848	chr17	+	3808	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-3	6	combination_of_known_junctions	FALSE	canonical	3	276	junction_13	138.874711880889	88	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGTAGTTTCGAGTAC	8793	False	NA	NA	False	NA	NA	NA	35354458	35366288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
tx.8849	chr17	+	3691	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	154.706302168191	60	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGTAGTTTCGAGTAC	8799	False	NA	NA	False	NA	NA	NA	35354464	35366288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
tx.885	chr1	-	3611	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	77	0	58	0	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	NA	False	NA	NA	NA	151304129	151243449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
tx.8850	chr17	+	3702	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	168.319388861375	38	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8799	False	NA	NA	False	NA	NA	NA	35354464	35366296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
tx.8851	chr17	-	3582	16	ISM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	8305	0	-3333	0	3prime_fragment	FALSE	canonical	3	318	junction_15	67.144090498635	163	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	4698	False	NA	NA	False	NA	NA	NA	35375568	35368051	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
tx.8852	chr17	+	1145	3	NNC	ENSMUSG00000024399.6	novel	1160	3	NA	NA	-7559	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCTTGCCAGTGTCTT	5172	False	NA	NA	False	NA	NA	NA	35405855	35415281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_35406083_35414025_35414342_35414679
tx.8853	chr17	-	1446	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	1	0	1	0	multi-exon	FALSE	canonical	3	75	junction_2	9.89949493661167	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	35454767	35439150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
tx.8854	chr17	-	1463	4	NNC	ENSMUSG00000042419.9	novel	1447	4	NA	NA	-726	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	32.4995726467629	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	35455494	35439150	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_35439953_35440112_35440335_35453927_35454208_35455335
tx.8855	chr17	+	1690	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	25	24	-7	3	multi-exon	FALSE	canonical	3	2129	junction_1	149.184985839729	2129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	35460746	35472659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
tx.8856	chr17	+	1592	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	367	143	1	3	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAGTGACCTTGATTG	2086	False	NA	NA	False	NA	NA	NA	35482072	35486332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
tx.8857	chr17	+	1670	6	NIC	ENSMUSG00000091705.9	novel	1150	5	NA	NA	871	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	2.33238075793812	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	5751	False	NA	NA	False	NA	NA	NA	35562088	35565738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564635_35564685_35564819
tx.8858	chr17	+	1346	5	FSM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	14	2	14	-2	multi-exon	FALSE	canonical	3	3795	junction_3	232.519354033164	2809	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCTGAATTTTGTTTTC	3050	False	NA	NA	False	NA	NA	NA	35816928	35821667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184
tx.8859	chr17	-	1754	4	FSM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	-17	-5	-17	2	multi-exon	FALSE	canonical	2	5	junction_3	32.9983164553722	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTTGAATCTAAGTCTGC	9355	False	NA	NA	False	NA	NA	NA	35827699	35823628	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35824082_35825370_35825918_35826774_35827437_35827607
tx.886	chr1	-	2873	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	42.2765651215601	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	NA	False	NA	NA	NA	151304135	151243449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
tx.8860	chr17	-	1654	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	11	0	7	0	multi-exon	FALSE	canonical	3	29	junction_3	21.6846079563875	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9344	False	NA	NA	False	NA	NA	NA	35827710	35823630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
tx.8861	chr17	-	1632	4	NIC	ENSMUSG00000050410.16	novel	1665	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	19.7989898732233	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9318	False	NA	NA	False	NA	NA	NA	35827736	35823630	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_35824082_35825370_35825918_35826774_35827328_35827655
tx.8862	chr17	+	2644	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-94	0	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_16	36.4063951186647	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4338	False	NA	NA	False	NA	NA	NA	35827902	35841902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_35828009_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841337_35841456_35841597
tx.8863	chr17	+	2622	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	28.0148255362583	34	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4357	False	NA	NA	False	NA	NA	NA	35827921	35841902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_35828009_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
tx.8864	chr17	+	2709	18	FSM	ENSMUSG00000040312.15	ENSMUST00000164242.9	2656	18	-43	-10	-43	1	multi-exon	FALSE	canonical	3	44	junction_1	24.5503507751598	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4389	False	NA	NA	False	NA	NA	NA	35827953	35841903	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
tx.8865	chr17	+	3247	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	79	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.1343417071988	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGAGAGACTGCGATT	4587	False	NA	NA	False	NA	NA	NA	35828151	35841904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_35828862_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
tx.8866	chr17	+	2357	2	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	-9056	-267	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTATTTGCCTTCTTGGG	6770	False	NA	NA	False	NA	NA	NA	35853968	35867810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_35854073_35865557
tx.8867	chr17	+	2438	2	FSM	ENSMUSG00000039518.8	ENSMUST00000044804.8	2678	2	-23	263	-23	-263	multi-exon	FALSE	canonical	1	1	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGCCTTCTTGGGGTCC	1640	False	NA	NA	False	NA	NA	NA	35863001	35867814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_35863183_35865557
tx.8868	chr17	+	1495	3	NNC	ENSMUSG00000039269.6	novel	1290	2	NA	NA	-3383	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	2	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTCTCCGCGTCAGTT	26	False	NA	NA	False	NA	NA	NA	35874963	35879847	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_35875226_35878401_35878518_35878730
tx.8869	chr17	-	3662	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	12	751	12	5	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	315	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAAGTGTGAGCCTTTACT	1773	False	NA	NA	False	NA	NA	NA	35978472	35967276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
tx.887	chr1	+	2468	15	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	47.2939138337512	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTGACTGGGCTCGC	NA	False	NA	NA	False	NA	NA	NA	151304399	151333910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
tx.8870	chr17	-	1653	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	24	2	-12	-2	multi-exon	FALSE	canonical	3	142	junction_8	17.8418429806661	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACGCGGCTTCAGACGTC	NA	False	NA	NA	False	NA	NA	NA	35984607	35978623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
tx.8871	chr17	-	2376	10	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8965	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	10.60863845536	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6741	False	NA	NA	False	NA	NA	NA	35999898	35992458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_35999853
tx.8872	chr17	-	3647	17	NIC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	11.1186779789685	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	9058	False	NA	NA	False	NA	NA	NA	36011491	35992458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
tx.8873	chr17	-	3770	18	FSM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	-6	5	-6	-2	multi-exon	FALSE	canonical	3	11	junction_16	10.4162502800285	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCTGTGGGTGTATTT	9041	False	NA	NA	False	NA	NA	NA	36011508	35992463	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
tx.8874	chr17	+	1122	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	1	8	1	-8	multi-exon	FALSE	canonical	3	7	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCAGTTCTCGAAGTG	NA	False	NA	NA	False	NA	NA	NA	36132576	36133807	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_36132821_36132929
tx.8875	chr17	+	1707	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	112	6	-5	-6	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTATCTATACTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	36134233	36143677	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
tx.8876	chr17	-	2570	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	74	5	-15	-5	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	10698	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGCTGTGAGGCTGTG	NA	False	NA	NA	False	NA	NA	NA	36149124	36144817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
tx.8877	chr17	+	7208	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-37	0	combination_of_known_junctions	TRUE	canonical	3	75	junction_1	32.7234879966465	29	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9353	False	NA	NA	False	NA	NA	NA	36152530	36170562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
tx.8878	chr17	+	7270	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	38.3054391264043	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9377	False	NA	NA	False	NA	NA	NA	36152554	36170562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
tx.8879	chr17	+	6105	12	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-712	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	28.6486265229748	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	NA	False	NA	NA	False	NA	NA	NA	36158680	36170562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
tx.888	chr1	+	2643	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	106	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	NA	False	NA	NA	NA	151304398	151333912	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
tx.8880	chr17	+	3881	7	ISM	ENSMUSG00000061607.16	ENSMUST00000082337.13	7335	16	11333	0	4347	0	3prime_fragment	FALSE	canonical	3	142	junction_2	14.742229591664	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	NA	False	NA	NA	False	NA	NA	NA	36163739	36170562	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
tx.8881	chr17	+	1446	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	18	2	-2	-2	multi-exon	FALSE	canonical	3	236	junction_1	13.2748718344933	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACTTGTCTGTCCATG	4607	False	NA	NA	False	NA	NA	NA	36172227	36176292	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
tx.8882	chr17	+	3965	3	FSM	ENSMUSG00000034595.18	ENSMUST00000187690.7	3185	3	-780	0	210	0	multi-exon	FALSE	canonical	3	80	junction_1	4	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9106	False	NA	NA	False	NA	NA	NA	36176726	36186488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_36179678_36184617_36184832_36185688
tx.8883	chr17	+	2933	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	-190	0	-190	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9137	False	NA	NA	False	NA	NA	NA	36176757	36186488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
tx.8884	chr17	+	3380	20	FSM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	-33	4	-33	0	multi-exon	TRUE	canonical	3	278	junction_2	372.558080768229	605	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGCCTTATGTCATT	NA	False	NA	NA	False	NA	NA	NA	36190677	36203558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
tx.8885	chr17	-	2038	5	NNC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	11	junction_3	173.612175552292	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	NA	False	NA	NA	NA	36208017	36203568	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_36203859_36203931_36204002_36205810_36205945_36206175_36206265_36206562
tx.8886	chr17	-	1127	6	NIC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	147.212227752996	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTTTTCACGTCACTTT	NA	False	NA	NA	False	NA	NA	NA	36208010	36203567	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207936
tx.8887	chr17	-	1285	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	6	2	6	-2	multi-exon	FALSE	canonical	3	184	junction_5	90.4765162901402	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	NA	False	NA	NA	NA	36208317	36203570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
tx.8888	chr17	-	2113	5	FSM	ENSMUSG00000050705.16	ENSMUST00000146451.8	2081	5	-24	-8	-15	-2	multi-exon	FALSE	canonical	3	307	junction_3	46.1756158594555	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	NA	False	NA	NA	NA	36208027	36203570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562
tx.8889	chr17	-	1184	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148482.8	1193	6	7	2	-2	-2	multi-exon	FALSE	canonical	3	95	junction_5	123.227269709265	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	NA	False	NA	NA	NA	36208005	36203570	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
tx.889	chr1	-	3034	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	122	4	0	-4	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	446	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAAGTTATTAGATGTG	NA	False	NA	NA	False	NA	NA	NA	151376584	151345160	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
tx.8890	chr17	-	1400	12	FSM	ENSMUSG00000024426.18	ENSMUST00000149277.8	1388	12	-2	-10	-2	-7	multi-exon	FALSE	canonical	3	11	junction_2	38.3140567174602	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGTGACTTGTCATT	NA	False	NA	NA	False	NA	NA	NA	36220951	36208493	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
tx.8891	chr17	-	2567	6	ISM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	-2	1	-2	-1	intron_retention	FALSE	canonical	3	1264	junction_4	57.164324538999	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4294	False	NA	NA	False	NA	NA	NA	36227283	36221271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587
tx.8892	chr17	-	1080	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	-2	1	-2	-1	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	676	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4294	False	NA	NA	False	NA	NA	NA	36227283	36221271	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
tx.8893	chr17	+	4366	20	FSM	ENSMUSG00000039220.17	ENSMUST00000087211.9	4255	20	-111	0	21	0	multi-exon	FALSE	canonical	3	16	junction_1	32.7700795901305	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTATGTTTCACTTC	NA	False	NA	NA	False	NA	NA	NA	36227346	36243175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_36227491_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
tx.8894	chr17	+	4244	20	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	16.24875874228	309	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTATGTTTCACTTC	NA	False	NA	NA	False	NA	NA	NA	36227875	36243175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
tx.8895	chr17	-	3166	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	-3	-2	-3	2	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	1269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCCTGTGGGGTGCTTC	NA	False	NA	NA	False	NA	NA	NA	36280656	36267708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
tx.8896	chr17	-	2354	6	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	36.7205664444327	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTCTCATTTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	36291135	36283431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018_36290148_36290599
tx.8897	chr17	-	1919	4	FSM	ENSMUSG00000038500.16	ENSMUST00000172429.8	1878	4	-40	-1	-40	1	multi-exon	FALSE	canonical	3	103	junction_2	20.5101600838869	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTCTCATTTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	36289903	36283431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602
tx.8898	chr17	-	2067	5	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	21	0	intron_retention	FALSE	canonical	3	88	junction_4	22.0056810846654	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	36290397	36283432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018
tx.8899	chr17	+	2194	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	64	590	64	-590	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	417	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCAGGTGGCCTGAGGT	NA	False	NA	NA	False	NA	NA	NA	36290806	36299764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
tx.89	chr1	+	4054	4	ISM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	25	0	25	0	intron_retention	FALSE	canonical	3	88	junction_3	2.94392028877595	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTCATTCATTTCTAT	NA	False	NA	NA	False	NA	NA	NA	21288823	21300391	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815
tx.890	chr1	-	3295	8	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	-34	-34	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGGAGCACATAAACTAT	NA	False	NA	NA	False	NA	NA	NA	151376740	151345190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
tx.8900	chr17	+	1859	11	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	768	590	231	-590	3prime_fragment	FALSE	canonical	3	585	junction_6	35.9699874895725	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCAGGTGGCCTGAGGT	NA	False	NA	NA	False	NA	NA	NA	36291510	36299764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
tx.8901	chr17	+	1071	2	FSM	ENSMUSG00000092368.2	ENSMUST00000173900.2	1111	2	47	-7	47	7	multi-exon	FALSE	canonical	3	20	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTATTAGTCCACAGTT	NA	False	NA	NA	False	NA	NA	NA	36305391	36349334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_36305453_36348324
tx.8902	chr17	-	3338	3	FSM	ENSMUSG00000073406.11	ENSMUST00000184850.8	1072	3	-2261	-5	-25	5	multi-exon	FALSE	canonical	3	395	junction_2	90.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	NA	False	NA	NA	NA	36395140	36391001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133
tx.8903	chr17	-	1240	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	-26	-76	-26	2	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTTTCCTGCATTG	NA	False	NA	NA	False	NA	NA	NA	36395141	36391004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
tx.8904	chr17	-	933	5	FSM	ENSMUSG00000073406.11	ENSMUST00000195833.6	829	5	-25	-79	-25	5	multi-exon	FALSE	canonical	3	113	junction_4	176.893329438959	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	NA	False	NA	NA	NA	36395140	36391001	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394825_36395051
tx.8905	chr17	-	963	5	FSM	ENSMUSG00000073406.11	ENSMUST00000194244.6	862	5	-25	-76	-25	2	multi-exon	FALSE	canonical	3	214	junction_3	129.95191418367	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTTTCCTGCATTG	NA	False	NA	NA	False	NA	NA	NA	36395140	36391004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394858_36395051
tx.8906	chr17	-	3147	4	NIC	ENSMUSG00000073406.11	novel	1064	6	NA	NA	-32	1	intron_retention	FALSE	canonical	3	343	junction_3	99.8632398165945	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTATGTTTCCTGCATT	NA	False	NA	NA	False	NA	NA	NA	36395147	36391005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_36391216_36391890_36392008_36392133_36394858_36395051
tx.8907	chr17	-	1204	6	FSM	ENSMUSG00000073406.11	ENSMUST00000195838.6	1105	6	-25	-74	-25	0	multi-exon	FALSE	canonical	3	113	junction_5	180.752427369593	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTATGTTTCCTGCAT	NA	False	NA	NA	False	NA	NA	NA	36395140	36391006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394825_36395051
tx.8908	chr17	-	526	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	202	1	-11	-1	multi-exon	FALSE	canonical	3	621	junction_3	61.4262769505038	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTGTGGTATCTCAAC	NA	False	NA	NA	False	NA	NA	NA	36568759	36566559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
tx.8909	chr17	-	3058	7	FSM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	147	-1	-37	1	multi-exon	FALSE	canonical	3	42	junction_1	8.81286937760152	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGAGTTGCGTGGTAA	NA	False	NA	NA	False	NA	NA	NA	36582312	36569763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
tx.891	chr1	+	6735	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-208	4	-21	-4	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	290	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCACAGTTGCTCATT	NA	False	NA	NA	False	NA	NA	NA	151446915	151597686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
tx.8910	chr17	-	5740	6	ISM	ENSMUSG00000045409.17	ENSMUST00000042717.13	3085	7	172	-1	172	1	3prime_fragment	FALSE	canonical	3	42	junction_1	6.79411510058521	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGAGTTGCGTGGTAA	NA	False	NA	NA	False	NA	NA	NA	36582724	36569763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500
tx.8911	chr17	-	3092	7	NIC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	-47	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	19.4028921097403	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGAGTTGCGTGGTAA	NA	False	NA	NA	False	NA	NA	NA	36582322	36569763	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_36571838_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
tx.8912	chr17	-	1491	5	FSM	ENSMUSG00000045409.17	ENSMUST00000113704.10	1465	5	-26	0	-26	0	multi-exon	FALSE	canonical	3	20	junction_1	19.421315609402	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCATTGTGTTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	36582301	36573496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_36574130_36574620_36574852_36578016_36578113_36579500_36579959_36582228
tx.8913	chr17	+	3087	8	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-12	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	104.245393379354	13	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGTCATCTGGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	37148052	37170285	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_37148157_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
tx.8914	chr17	+	3206	9	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	83.9224902812113	159	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCATCTGGTGCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	37148044	37170288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
tx.8915	chr17	+	3173	9	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	7	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	88.8776370916779	106	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCATCTGGTGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	37148044	37170287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
tx.8916	chr17	+	3156	8	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_5	94.4031735889926	43	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTGGTGCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	37148044	37170289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
tx.8917	chr17	+	3179	8	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-12	-1	intron_retention	FALSE	canonical	0	0	junction_5	89.3383844647725	41	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCATCTGGTGCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	37148052	37170288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
tx.8918	chr17	+	2910	7	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-1772	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	91.6213524361119	6	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCATCTGGTGCTGTC	NA	False	NA	NA	False	NA	NA	NA	37161621	37170286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
tx.8919	chr17	+	2003	4	FSM	ENSMUSG00000036492.13	ENSMUST00000040498.12	1579	4	1	-425	1	425	multi-exon	FALSE	canonical	2	2	junction_1	1.4142135623731	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGGTTTTGCTGATTT	6858	False	NA	NA	False	NA	NA	NA	37253810	37259303	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_37254343_37256065_37256089_37256295_37256388_37257947
tx.892	chr1	+	3321	12	ISM	ENSMUSG00000026483.14	ENSMUST00000097541.10	4010	15	-51	8497	28	-8497	5prime_fragment	FALSE	canonical	3	183	junction_3	15.8291498025344	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTCATTGGCACATCCA	NA	False	NA	NA	False	NA	NA	NA	151447151	151586596	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847
tx.8920	chr17	-	1237	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	30	332	30	-332	multi-exon	FALSE	canonical	3	708	junction_2	5	169	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGACTTAGAGCCAATG	NA	False	NA	NA	False	NA	NA	NA	37262575	37259579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_37260447_37260768_37260878_37262314
tx.8921	chr17	-	675	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	37	-2	-14	0	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGATGTTATGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	37269388	37265247	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
tx.8922	chr17	+	970	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	8	-2	8	-1	multi-exon	FALSE	canonical	0	0	junction_1	121.5	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGCTAATGGTACCAT	NA	False	NA	NA	False	NA	NA	NA	37269491	37276516	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_37269595_37275248_37275325_37275725
tx.8923	chr17	+	1307	3	FSM	ENSMUSG00000036214.15	ENSMUST00000172672.8	652	3	27	-682	5	1	multi-exon	FALSE	canonical	3	30	junction_1	106.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	False	NA	NA	False	NA	NA	NA	37269537	37276515	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_37269979_37275248_37275325_37275725
tx.8924	chr17	-	3608	7	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	87	1843	intron_retention	FALSE	canonical	3	28	junction_4	72.6934201515745	26	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	NA	False	NA	NA	NA	37299850	37278243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_-_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37298307_37298416_37298546_37298823_37299396
tx.8925	chr17	-	2574	9	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	274	1844	multi-exon	FALSE	canonical	3	31	junction_1	80.2090043261977	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	NA	False	NA	NA	NA	37299663	37278242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_-_37279193_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37298823_37299396
tx.8926	chr17	-	2516	8	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	273	1843	multi-exon	FALSE	canonical	3	28	junction_5	76.1799695136592	18	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	NA	False	NA	NA	NA	37299664	37278243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37298307_37298416_37298546_37298823_37299396
tx.8927	chr17	-	1972	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	763	-276	271	276	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTAAGTGAGACTGGA	NA	False	NA	NA	False	NA	NA	NA	37299666	37294676	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
tx.8928	chr17	+	1676	5	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-14	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1406.78256582174	136	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	NA	False	NA	NA	NA	37313431	37321504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_37313632_37314177_37314208_37315688_37315796_37316941_37317087_37320310
tx.8929	chr17	+	1710	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	19	20	-10	-20	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	NA	False	NA	NA	NA	37313435	37321504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
tx.893	chr1	+	6342	20	NIC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-18	51	combination_of_known_junctions	TRUE	canonical	3	23	junction_16	31.4765884947638	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTCTCTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	151631103	151697853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
tx.8930	chr17	+	3689	3	FSM	ENSMUSG00000036036.16	ENSMUST00000174672.2	2597	3	-1112	20	0	-20	multi-exon	FALSE	canonical	3	2767	junction_1	286	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	NA	False	NA	NA	NA	37313445	37321504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_37315796_37316941_37317087_37320310
tx.8931	chr17	+	4783	2	NIC	ENSMUSG00000036036.16	novel	2597	3	NA	NA	7	-23	intron_retention	FALSE	canonical	3	3339	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGGGAGGGGAGGTC	NA	False	NA	NA	False	NA	NA	NA	37313494	37321501	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_37317087_37320310
tx.8932	chr17	+	1589	4	FSM	ENSMUSG00000024462.18	ENSMUST00000174456.8	1595	4	8	-2	8	2	multi-exon	FALSE	canonical	3	45	junction_1	13.0213499897497	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTAATTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	37356927	37360361	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312
tx.8933	chr17	+	1482	3	FSM	ENSMUSG00000024462.18	ENSMUST00000172789.2	1460	3	-23	1	-23	-1	multi-exon	FALSE	canonical	3	67	junction_1	4.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGTTTTGTAATTTGTC	NA	False	NA	NA	False	NA	NA	NA	37357436	37360358	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_37357669_37358345_37358550_37359312
tx.8934	chr17	+	6498	19	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-1	3	intron_retention	FALSE	canonical	3	39	junction_6	19.2332177928361	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCACCTCATCCACTGT	NA	False	NA	NA	False	NA	NA	NA	37357458	37385185	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_37357669_37358345_37358550_37359312_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
tx.8935	chr17	+	5891	16	NIC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	594	-6	intron_retention	FALSE	canonical	3	39	junction_4	20.5279213647061	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCATCCACTGTCCTGT	NA	False	NA	103	True	NA	NA	NA	37360063	37385190	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
tx.8936	chr17	+	4969	17	NIC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	967	-2	intron_retention	FALSE	canonical	3	39	junction_4	20.2623419179521	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCACTGTCCTGTGAAC	NA	False	NA	93	True	NA	NA	NA	37360436	37385194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
tx.8937	chr17	+	4040	4	NNC	ENSMUSG00000092390.2	novel	1406	3	NA	NA	-13789	2512	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1.4142135623731	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTAGTCAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	38306748	38325799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_38306872_38320538_38320666_38320869_38320931_38322070
tx.8938	chr17	-	988	2	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTACCTTCTTAATCAC	NA	False	NA	NA	False	NA	NA	NA	40155157	40153887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_-_40154384_40154665
tx.8939	chr17	-	1470	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	471	1	471	-1	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATGTGTGAGTAGAAC	NA	False	NA	NA	False	NA	NA	NA	41245467	41233942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
tx.894	chr1	+	6614	20	FSM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	-20	-267	-17	267	multi-exon	FALSE	canonical	3	102	junction_16	20.6122358303988	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATCATCAAAAGTAGGT	NA	False	NA	NA	False	NA	NA	NA	151631104	151698069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
tx.8940	chr17	+	3661	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	12	1	12	-1	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	605	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTTCCTGTTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	41245587	41272878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
tx.8941	chr17	-	5603	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	66.4230959957521	70	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTTGTTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	43187556	43103842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
tx.8942	chr17	-	5637	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-274	1	2	0	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	418	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTTGTTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	43187554	43103842	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
tx.8943	chr17	+	3639	6	FSM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	155	junction_1	28.3450171987953	331	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	NA	False	NA	NA	NA	43327433	43400080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
tx.8944	chr17	+	3320	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19756	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	56.2899635814414	106	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	NA	False	NA	NA	NA	43347214	43400080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_43347446_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
tx.8945	chr17	+	3371	5	FSM	ENSMUSG00000039601.17	ENSMUST00000229744.2	2914	5	-5	-452	-5	0	multi-exon	FALSE	canonical	2	8	junction_1	4.9180788932265	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTGGCATCATTTC	4888	False	NA	NA	False	NA	NA	NA	44112729	44350403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_44112988_44147161_44147389_44328657_44328832_44331843_44332016_44347863
tx.8946	chr17	+	2523	4	FSM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	19	-8	-15	0	multi-exon	FALSE	canonical	3	12	junction_3	7.40870359029762	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTTGTTTTGCTTAC	NA	False	NA	NA	False	NA	NA	NA	44389754	44397458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_44389874_44391537_44392402_44393634_44393812_44396095
tx.8947	chr17	-	4588	4	FSM	ENSMUSG00000023961.17	ENSMUST00000024757.14	4560	4	-29	1	-29	-1	multi-exon	FALSE	canonical	3	12	junction_3	10.2740233382816	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCAGCCTTCTTAATTT	NA	False	NA	NA	False	NA	NA	NA	44416729	44407199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416539
tx.8948	chr17	-	4525	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	-73	-7	-28	-1	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCAGCCTTCTTAATTT	NA	False	NA	NA	False	NA	NA	NA	44416728	44407199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
tx.8949	chr17	+	1482	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	25	1	25	-1	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGAGTGGCCTGCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	45088063	45430176	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
tx.895	chr1	-	3418	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-183	6324	-183	2055	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGTACTTTATTT	NA	False	NA	NA	False	NA	NA	NA	151966059	151766598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
tx.8950	chr17	-	2859	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	165	3	-31	-3	multi-exon	TRUE	canonical	3	561	junction_9	75.0022221893014	1210	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTAGCCTTTTGTTT	2349	False	NA	NA	False	NA	NA	NA	45744498	45702812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
tx.8951	chr17	+	6843	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	-20	-4245	-7	-2	multi-exon	FALSE	canonical	3	41	junction_1	0	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGTGATTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	45744770	45753468	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_45745154_45747008
tx.8952	chr17	+	3346	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	1	2	1	-2	multi-exon	FALSE	canonical	3	146	junction_8	22.4045468336421	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	45817767	45831767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
tx.8953	chr17	+	3553	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	0	-9	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	45.491620107444	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTATGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	45817766	45831760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
tx.8954	chr17	+	3138	22	NNC	ENSMUSG00000023938.9	novel	2956	11	NA	NA	321	-4	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	45.0490788044971	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	45818087	45831765	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_45818122_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
tx.8955	chr17	+	2453	6	FSM	ENSMUSG00000023947.9	ENSMUST00000024742.9	2435	6	-18	0	-18	0	multi-exon	FALSE	canonical	3	12	junction_2	2.44948974278318	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGTTATACGTTGCAA	NA	False	NA	NA	False	NA	NA	NA	45866610	45874095	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872927
tx.8956	chr17	+	1824	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	83	-1	-3	0	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	False	NA	NA	False	NA	NA	NA	45874882	45878597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
tx.8957	chr17	+	2314	3	FSM	ENSMUSG00000037089.12	ENSMUST00000224559.2	2326	3	12	0	12	0	multi-exon	FALSE	canonical	3	396	junction_2	19	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	NA	False	NA	NA	NA	45874901	45878595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_45875700_45875850_45876006_45877234
tx.8958	chr17	-	2515	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	3	2	3	-2	multi-exon	TRUE	canonical	3	9221	junction_4	988.252604347694	14285	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCCTGCTCTCCTTGTA	NA	False	NA	NA	False	NA	NA	NA	45884194	45878702	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
tx.8959	chr17	-	2070	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	1453	junction_5	311.5369990469	2492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	45906476	45896127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
tx.896	chr1	-	1087	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	43	3	-19	-3	multi-exon	FALSE	canonical	3	212	junction_4	96.4219243740758	218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGTCGTAATCATCCA	NA	False	NA	NA	False	NA	NA	NA	152262390	152246488	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
tx.8960	chr17	-	3258	24	FSM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	21	5	21	-5	multi-exon	FALSE	canonical	3	105	junction_20	27.310993375713	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	45997164	45971101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
tx.8961	chr17	-	3215	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	25	-5	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	30.8694933524137	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	45997160	45971101	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
tx.8962	chr17	+	615	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	29	1	-6	-1	multi-exon	FALSE	canonical	3	814	junction_1	143	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTGAGCTGTGATC	NA	False	NA	NA	False	NA	NA	NA	45997276	46009420	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_45997354_46006407_46006499_46008973
tx.8963	chr17	-	3320	3	ISM	ENSMUSG00000023951.19	ENSMUST00000142321.2	640	5	1225	-1840	1225	0	3prime_fragment	FALSE	canonical	3	122	junction_2	171	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	46334503	46327918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_46329806_46331916_46332049_46333202
tx.8964	chr17	-	2899	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	344	-5	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	176.43884681857	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCTCTCCCTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	46341938	46327923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
tx.8965	chr17	-	2961	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	356	-3	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_7	209.534664220993	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	46341926	46327921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
tx.8966	chr17	-	5242	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	122	junction_2	146.247981942392	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	46343301	46327921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
tx.8967	chr17	-	3454	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	-6	3	-6	-3	multi-exon	FALSE	canonical	3	338	junction_2	72.4463402955748	514	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	46343301	46327921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
tx.8968	chr17	-	3322	6	FSM	ENSMUSG00000023951.19	ENSMUST00000024747.14	2765	6	-560	3	-6	-3	multi-exon	FALSE	canonical	3	41	junction_1	191.124671353543	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	46343301	46327921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
tx.8969	chr17	-	3526	8	FSM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	-6	-1547	-6	-3	multi-exon	FALSE	canonical	3	122	junction_2	174.18943476478	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	46343301	46327921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
tx.897	chr1	+	3897	3	FSM	ENSMUSG00000008475.14	ENSMUST00000143008.2	748	3	-1964	-1185	-7	-17	multi-exon	FALSE	canonical	3	1297	junction_2	75.5	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCTTAATTGAATAC	NA	False	NA	NA	False	NA	NA	NA	152642285	152651331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_152644685_152647114_152647292_152650010
tx.8970	chr17	-	3889	2	FSM	ENSMUSG00000023951.19	ENSMUST00000143985.2	550	2	-1623	-1716	-1623	-3	multi-exon	FALSE	canonical	3	464	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	46333921	46327921	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46329806_46331916
tx.8971	chr17	-	2501	4	FSM	ENSMUSG00000023951.19	ENSMUST00000133605.8	874	4	-22	-1605	-22	-8	multi-exon	FALSE	canonical	3	338	junction_2	71.0602248487546	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGCTCTCCCTGGT	NA	False	NA	NA	False	NA	NA	NA	46335829	46327926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369
tx.8972	chr17	-	4278	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	338	junction_2	76.7984374841051	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCTCTCCCTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	46343301	46327923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46339276_46339326_46342216
tx.8973	chr17	+	869	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	13	2	3	-2	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	347	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTGGTCAGTGCTTAG	NA	False	NA	NA	False	NA	NA	NA	46421924	46439834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
tx.8974	chr17	-	949	5	FSM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	18	-1	18	1	multi-exon	FALSE	canonical	1	1	junction_4	1.22474487139159	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTGATTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	46455124	46440195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46440425_46445898_46446046_46447667_46447798_46452472_46452639_46454847
tx.8975	chr17	-	1246	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	26	0	26	0	multi-exon	FALSE	canonical	3	95	junction_1	3.5	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGATTTAGACTTTT	NA	False	NA	NA	False	NA	NA	NA	46464453	46458312	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46459211_46463704_46463968_46464368
tx.8976	chr17	+	2883	12	FSM	ENSMUSG00000023952.14	ENSMUST00000024748.14	2966	12	80	3	1	-1	multi-exon	FALSE	canonical	3	39	junction_1	11.1762735698931	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	NA	False	NA	NA	NA	46472037	46480293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
tx.8977	chr17	-	3241	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	-3	0	-3	0	multi-exon	TRUE	canonical	3	10	junction_7	5.44426303552648	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7120	False	NA	NA	False	NA	NA	NA	46513574	46482280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
tx.8978	chr17	-	3041	10	FSM	ENSMUSG00000023953.10	ENSMUST00000233438.2	2130	10	-41	-870	-18	0	multi-exon	FALSE	canonical	2	4	junction_7	6.99382443638054	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7105	False	NA	NA	False	NA	NA	NA	46513589	46482280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46509559_46509695_46510317_46510461_46513322
tx.8979	chr17	-	1247	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	60	7	-26	-7	multi-exon	TRUE	canonical	3	702	junction_8	54.719597723302	532	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	46558920	46554852	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
tx.898	chr1	+	1804	4	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	92	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	649.932817040859	1106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTCTTAATTGAATA	NA	False	NA	NA	False	NA	NA	NA	152642384	152651330	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_152642621_152644613_152644685_152647114_152647292_152650010
tx.8980	chr17	+	1502	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	13	520	13	0	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	2593	False	NA	NA	False	NA	NA	NA	46559018	46562943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
tx.8981	chr17	+	1522	9	NNC	ENSMUSG00000071074.10	novel	2035	9	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	55.4209741433692	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTAGCTCCTGTTGG	2603	False	NA	NA	False	NA	NA	NA	46559028	46562942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562258_46562414_46562491
tx.8982	chr17	-	2514	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	117.719199793407	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5828	False	NA	NA	False	NA	NA	NA	46593930	46568799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
tx.8983	chr17	-	2528	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	125.623246256415	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTCCTTCCCACTT	5824	False	NA	NA	False	NA	NA	NA	46593934	46568792	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46593271_46593366_46593885
tx.8984	chr17	-	2461	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	135.013925207736	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5815	False	NA	NA	False	NA	NA	NA	46593943	46568801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
tx.8985	chr17	-	2649	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	112.156620125682	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTAATTTCTTTCTCCTTC	5824	False	NA	NA	False	NA	NA	NA	46593934	46568798	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
tx.8986	chr17	-	2550	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_7	97.6076328982524	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5825	False	NA	NA	False	NA	NA	NA	46593933	46568799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593271_46593366_46593885
tx.8987	chr17	-	2554	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	5	0	2	0	multi-exon	FALSE	canonical	3	131	junction_7	88.074059745194	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5824	False	NA	NA	False	NA	NA	NA	46593934	46568799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
tx.8988	chr17	-	2421	10	FSM	ENSMUSG00000012296.17	ENSMUST00000012440.14	2426	10	2	3	2	0	multi-exon	FALSE	canonical	3	80	junction_7	101.660412679532	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5824	False	NA	NA	False	NA	NA	NA	46593934	46568799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
tx.8989	chr17	-	2424	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	-9	-3	2	0	multi-exon	FALSE	canonical	3	131	junction_7	91.006850915633	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5824	False	NA	NA	False	NA	NA	NA	46593934	46568799	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
tx.899	chr1	+	2004	15	FSM	ENSMUSG00000026480.13	ENSMUST00000027754.7	2596	15	-143	735	-90	-735	multi-exon	FALSE	canonical	0	0	junction_10	6.91382820210072	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACAACTCAGAAGATTT	416	False	NA	NA	False	NA	NA	NA	152683497	152712006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_152683957_152686668_152686752_152692741_152692851_152697266_152697402_152699967_152700076_152701632_152701693_152703168_152703213_152706102_152706245_152706443_152706513_152707364_152707441_152709073_152709097_152709527_152709680_152709819_152709932_152710777_152710956_152711752
tx.8990	chr17	-	3131	18	ISM	ENSMUSG00000032842.14	ENSMUST00000095261.10	5266	20	3497	-191	1363	0	3prime_fragment	FALSE	canonical	3	35	junction_13	8.70349728855608	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	6933	False	NA	NA	False	NA	NA	NA	46633195	46614155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062
tx.8991	chr17	-	4830	21	FSM	ENSMUSG00000032842.14	ENSMUST00000167360.8	4866	21	27	9	1	0	multi-exon	FALSE	canonical	3	24	junction_18	9.45832966226067	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7139	False	NA	NA	False	NA	NA	NA	46638922	46614155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
tx.8992	chr17	-	4946	20	FSM	ENSMUSG00000032842.14	ENSMUST00000047970.14	4885	20	-58	-3	-14	0	multi-exon	FALSE	canonical	3	24	junction_17	9.55491490762564	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7098	False	NA	NA	False	NA	NA	NA	46638963	46614155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46614579_46614838_46614952_46615082_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
tx.8993	chr17	+	7857	10	FSM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	-4	5207	-4	3496	multi-exon	FALSE	canonical	3	36	junction_4	9.25496196575947	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTCCTGTATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	46694652	46725743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559
tx.8994	chr17	+	6116	7	ISM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	15176	5282	-1149	3421	3prime_fragment	FALSE	canonical	3	36	junction_1	8.77496438739212	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTGGCTTGGACAAGT	NA	False	NA	NA	False	NA	NA	NA	46709832	46725668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559
tx.8995	chr17	+	1139	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	50	1	50	-1	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	259	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCACGGTGT	NA	False	NA	NA	False	NA	NA	NA	46807686	46810549	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
tx.8996	chr17	-	2643	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-22	-5	-22	5	multi-exon	FALSE	canonical	3	76	junction_2	5.5	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTAATGGCGTTTT	NA	False	NA	NA	False	NA	NA	NA	46867123	46859249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
tx.8997	chr17	-	2444	6	NIC	ENSMUSG00000015605.7	novel	2616	7	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	30.5587957877924	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTTTTAATGGCGT	NA	False	NA	NA	False	NA	NA	NA	46867119	46859252	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46860105_46860361_46860439_46861826_46861947_46862456_46862719_46864485_46864753_46866253
tx.8998	chr17	-	4219	20	FSM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	16	0	16	0	multi-exon	FALSE	canonical	3	399	junction_15	41.2008794247642	1102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	NA	False	NA	NA	NA	46940414	46875396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
tx.8999	chr17	-	3206	13	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	27	10765	27	-10765	5prime_fragment	FALSE	canonical	3	399	junction_8	43.6471807667905	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGGCATGGTAATTCA	NA	False	NA	NA	False	NA	NA	NA	46940403	46886161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
tx.9	chr1	+	5989	15	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	0	24768	0	622	5prime_fragment	FALSE	canonical	3	127	junction_3	10.2869542903344	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTTTCACATGAT	NA	False	NA	NA	False	NA	NA	NA	6284868	6322104	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
tx.90	chr1	-	2176	2	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGAGATCTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	21326404	21323504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_-_21323669_21324392
tx.900	chr1	-	5816	23	FSM	ENSMUSG00000042772.16	ENSMUST00000111836.4	3928	23	-14	-1874	-14	0	multi-exon	FALSE	canonical	3	60	junction_6	70.0173089579927	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	NA	False	NA	NA	NA	152778411	152712746	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
tx.9000	chr17	-	2420	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	30.5511226266728	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTCGGAGTCTTCATT	NA	False	NA	NA	False	NA	NA	NA	46956983	46941550	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956900
tx.9001	chr17	-	2348	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	-38	3	-38	-3	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	46956986	46941552	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
tx.9002	chr17	-	2949	16	FSM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	-624	-3	254	3	multi-exon	FALSE	canonical	3	33	junction_15	25.3531501439608	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTCGGAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	46956694	46941553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006
tx.9003	chr17	+	1018	7	FSM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	13	0	-1	0	multi-exon	FALSE	canonical	3	984	junction_4	70.4430423975443	497	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	46957167	46961058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
tx.9004	chr17	+	5274	26	FSM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	256	0	21	0	multi-exon	TRUE	canonical	3	53	junction_11	16.0216853046114	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATGGGACTGCTA	NA	False	NA	NA	False	NA	NA	NA	46961518	46975290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
tx.9005	chr17	+	5041	25	ISM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	1209	1	123	-1	3prime_fragment	FALSE	canonical	3	53	junction_10	16.1546346978885	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTATGGGACTGCT	NA	False	NA	NA	False	NA	NA	NA	46962471	46975289	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
tx.9006	chr17	-	2756	8	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-30	558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.326382569461	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTCTGGGTATTTTGC	NA	False	NA	NA	False	NA	NA	NA	46985243	46976691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_46978168_46978360_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
tx.9007	chr17	-	1462	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	41	-214	-24	211	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACTTAAGGCATGCA	NA	False	NA	NA	False	NA	NA	NA	46985237	46978172	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
tx.9008	chr17	-	2160	9	ISM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	2167	0	1629	0	intron_retention	FALSE	canonical	3	376	junction_8	32.8062494046485	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	NA	False	NA	NA	NA	46989663	46985475	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857
tx.9009	chr17	-	2077	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	20	3	20	0	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	458	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	46991810	46985478	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
tx.901	chr1	-	5769	22	NIC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_5	39.6466250175655	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	NA	False	NA	NA	NA	152778513	152712745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
tx.9010	chr17	+	819	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	130	-4	-8	4	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	248	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACACCGCCTGTGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	46992041	46994032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
tx.9011	chr17	-	2905	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	21	0	21	0	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	827	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1130	False	NA	NA	False	NA	NA	NA	47015907	46993916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
tx.9012	chr17	-	3069	14	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	-9	0	intron_retention	FALSE	canonical	3	369	junction_8	38.3709702893574	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1100	False	NA	NA	False	NA	NA	NA	47015937	46993916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
tx.9013	chr17	+	3182	17	FSM	ENSMUSG00000002763.17	ENSMUST00000002840.9	3200	17	18	0	5	0	multi-exon	TRUE	canonical	3	74	junction_1	12.2574913318346	168	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	False	NA	NA	False	NA	NA	NA	47022406	47036467	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
tx.9014	chr17	-	1849	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	8	51	8	0	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	504	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	NA	False	NA	NA	NA	47063132	47046681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
tx.9015	chr17	-	1880	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	192.284788789961	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	NA	False	NA	NA	NA	47063125	47046681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_47047873_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
tx.9016	chr17	-	2013	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	1	592	1	-592	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	1914	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCGTGTGAGTACAT	NA	False	NA	NA	False	NA	NA	NA	47093581	47085424	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
tx.9017	chr17	-	4396	6	ISM	ENSMUSG00000036568.8	ENSMUST00000040624.7	6575	11	19207	0	-21	0	3prime_fragment	FALSE	canonical	3	125	junction_4	7.22772439983706	84	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	47123132	47109045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849
tx.9018	chr17	-	4305	7	NIC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	45.4266808531433	30	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	47123155	47109045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123064
tx.9019	chr17	-	4280	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-293	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	43.9523100138725	37	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGTCACTGTGATTG	NA	False	NA	NA	False	NA	NA	NA	47123404	47109049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
tx.902	chr1	-	6057	23	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	78.6312137041966	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	NA	False	NA	NA	NA	152778513	152712745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
tx.9020	chr17	-	6392	12	NIC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-187	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	40.0510005446568	50	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	47169595	47109045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361
tx.9021	chr17	-	3968	18	ISM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	54656	5	-3709	-5	3prime_fragment	FALSE	canonical	3	102	junction_13	11.8266018834967	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTGAGTTTTGCCTCC	NA	False	NA	NA	False	NA	NA	NA	47266790	47239225	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707
tx.9022	chr17	-	7665	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	-31	-1	5	1	multi-exon	FALSE	canonical	3	27	junction_37	23.6319046780947	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTTGCCTCCATCTTC	NA	False	NA	NA	False	NA	NA	NA	47321477	47239219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
tx.9023	chr17	-	5727	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	-23	-13	1	7	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTTATTTTTCTAGTC	NA	False	NA	NA	False	NA	NA	NA	47321481	47241161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
tx.9024	chr17	+	6572	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16077	-488	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	10.0179526351446	19	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGTGGCTGTGCCTGCTT	2016	False	NA	NA	False	NA	NA	NA	47507235	47672395	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
tx.9025	chr17	+	1018	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119945.8	1018	7	-2	2	2	0	multi-exon	FALSE	canonical	3	774	junction_2	381.394116659162	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7139	False	NA	NA	False	NA	NA	NA	47679813	47689604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
tx.9026	chr17	+	1014	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	3	0	-1	0	multi-exon	FALSE	canonical	3	977	junction_2	314.646892034018	365	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7140	False	NA	NA	False	NA	NA	NA	47679814	47689604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
tx.9027	chr17	+	1668	4	FSM	ENSMUSG00000023979.15	ENSMUST00000024774.14	1668	4	-2	2	-2	-2	multi-exon	FALSE	canonical	3	16	junction_3	4.64279609239471	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTCCTGGAGGTG	1128	False	NA	NA	False	NA	NA	NA	47696315	47703890	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_47696622_47700034_47700185_47701905_47702027_47702799
tx.9028	chr17	-	524	3	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	4870	0	4870	0	3prime_fragment	FALSE	canonical	3	65	junction_1	4	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAGTCTCAGCTTTTTT	6706	False	NA	NA	False	NA	NA	NA	47706639	47705482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_47705746_47706032_47706127_47706472
tx.9029	chr17	+	2396	2	ISM	ENSMUSG00000034382.15	ENSMUST00000150819.3	4866	5	30521	495	30521	-1	3prime_fragment	FALSE	canonical	3	11	junction_1	0	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGTTTGTGTGTTGTG	9054	False	NA	NA	False	NA	NA	NA	47778250	47781068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_47779779_47780200
tx.903	chr1	-	5814	22	FSM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	-47	0	-23	0	multi-exon	FALSE	canonical	3	75	junction_8	55.4427244244903	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	NA	False	NA	NA	NA	152778420	152712745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
tx.9030	chr17	-	2546	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	5	233	0	-1	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACATAGGGCCTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	47813212	47799207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
tx.9031	chr17	-	1309	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	2	381	0	-381	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATTCTGGTAGCCTGC	NA	False	NA	NA	False	NA	NA	NA	47813212	47803969	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
tx.9032	chr17	+	1966	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	11	0	11	0	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	4621	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	NA	NA	NA	47904405	47910614	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
tx.9033	chr17	-	2550	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	255	1049	255	-1049	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	481	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGTTTGGTCTGTTGAG	2596	False	NA	NA	False	NA	NA	NA	47922162	47911304	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
tx.9034	chr17	+	2029	6	NNC	ENSMUSG00000090115.8	novel	8252	7	NA	NA	-503	14	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	46.9143901164664	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTTTTGTCAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	47983141	47991995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47990725_47990795_47991606
tx.9035	chr17	+	4731	5	FSM	ENSMUSG00000090115.8	ENSMUST00000152724.2	1443	5	-501	-2787	-501	2787	multi-exon	FALSE	canonical	3	25	junction_4	46.8794997840207	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTGGTGCCTTGTAC	NA	False	NA	NA	False	NA	NA	NA	47983143	47994768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
tx.9036	chr17	+	4889	5	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	41541	2876	-489	2806	3prime_fragment	FALSE	canonical	3	71	junction_4	30.9141957682874	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTGGTTTGCATGA	NA	False	NA	NA	False	NA	NA	NA	47983155	47994787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
tx.9037	chr17	-	541	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	114	94	-1	0	multi-exon	FALSE	canonical	3	3748	junction_1	369	648	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTATTTTATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	47998994	47997664	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_47997934_47998112_47998214_47998823
tx.9038	chr17	+	2170	7	FSM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	-27	1	-27	1	multi-exon	FALSE	canonical	3	46	junction_5	11.8988794990677	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	NA	NA	NA	48006095	48015210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
tx.9039	chr17	-	2514	3	NNC	ENSMUSG00000086930.2	novel	978	3	NA	NA	-1341	-1	intron_retention	FALSE	canonical	0	0	junction_2	4	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTGGAAAGGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	48014262	48010896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_48013119_48013488_48013688_48014169
tx.904	chr1	-	5908	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-118	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	74.1391504966413	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	NA	False	NA	NA	NA	152778515	152712745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
tx.9040	chr17	+	1420	9	FSM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	-31	-1	-31	1	multi-exon	FALSE	canonical	3	26	junction_3	162.479181358721	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	NA	False	NA	NA	NA	48037735	48045408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_48037890_48039666_48039827_48040176_48040295_48041018_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
tx.9041	chr17	+	1587	4	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	4624	0	4622	0	3prime_fragment	FALSE	canonical	3	283	junction_1	65.5303152916436	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	48042390	48045407	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_48043430_48043885_48044037_48044681_48044781_48045109
tx.9042	chr17	+	650	4	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	5781	1	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	164.050805138733	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	NA	False	NA	NA	NA	48043549	48045408	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_48043651_48043885_48044037_48044681_48044781_48045109
tx.9043	chr17	+	2312	9	FSM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	27	3	27	0	multi-exon	FALSE	canonical	3	431	junction_4	27.2370955683604	652	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	NA	False	NA	NA	NA	48047981	48103341	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
tx.9044	chr17	-	3800	17	NNC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	-19	-1	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_14	38.180492401225	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGTGTGTCACCAAG	NA	False	NA	NA	False	NA	NA	NA	48235420	48178058	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191767_48199049_48199146_48215220_48215460_48235130
tx.9045	chr17	-	3427	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	-59	631	-59	0	multi-exon	TRUE	canonical	3	59	junction_11	26.5099480148491	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	48235629	48178688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
tx.9046	chr17	-	3412	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	-210	-4	-41	0	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	48235611	48178688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
tx.9047	chr17	+	2825	5	FSM	ENSMUSG00000071068.8	ENSMUST00000233092.2	2094	5	411	-1142	-4	1142	multi-exon	FALSE	canonical	1	2	junction_2	1.6583123951777	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTTGTGCTTCCCT	1979	False	NA	NA	False	NA	NA	NA	48607378	48618191	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_48607625_48609639_48609961_48614907_48615302_48616146_48616254_48616434
tx.9048	chr17	-	3605	10	FSM	ENSMUSG00000023994.14	ENSMUST00000160319.8	1407	10	-6	-2192	5	0	multi-exon	TRUE	canonical	3	12	junction_8	15.1053910742547	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	48716764	48693916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706097_48707465_48707609_48716653
tx.9049	chr17	-	3632	10	FSM	ENSMUSG00000023994.14	ENSMUST00000078800.13	3653	10	17	4	2	0	multi-exon	TRUE	canonical	3	15	junction_8	14.2837212013545	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	48716776	48693916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706094_48707465_48707609_48716653
tx.905	chr1	-	5765	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_18	80.4197279566905	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	NA	False	NA	NA	NA	152778406	152712745	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
tx.9050	chr17	-	3553	9	FSM	ENSMUSG00000023994.14	ENSMUST00000162460.8	3706	9	153	0	-3	0	multi-exon	FALSE	canonical	3	22	junction_4	12.5492778676703	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	48716781	48693916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
tx.9051	chr17	+	1305	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	31	-12	31	0	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	48717072	48724294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
tx.9052	chr17	+	1166	6	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	31	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	404.287818268124	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	NA	False	NA	NA	NA	48717072	48724287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_48717266_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
tx.9053	chr17	+	1163	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	-35	7	31	5	multi-exon	FALSE	canonical	0	0	junction_5	381.26547181721	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	NA	False	NA	NA	NA	48717072	48724287	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
tx.9054	chr17	+	1298	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	33	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	403.460233480327	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTGCACACATGAACGT	NA	False	NA	NA	False	NA	NA	NA	48717074	48724286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
tx.9055	chr17	-	1224	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	197	-1	-115	1	multi-exon	FALSE	canonical	3	57	junction_2	11.5	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGCCTGTTCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	48739761	48726257	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_48726662_48729968_48730534_48739506
tx.9056	chr17	-	959	5	FSM	ENSMUSG00000023995.13	ENSMUST00000024794.12	956	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	26	junction_4	2.06155281280883	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCTGGTGTAAGGTGGA	NA	False	NA	NA	False	NA	NA	NA	48758553	48755462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_48755829_48756047_48756190_48756910_48757099_48757899_48758090_48758480
tx.9057	chr17	+	3371	9	FSM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	-539	6	-539	0	multi-exon	TRUE	canonical	1	5	junction_1	7.66383552798467	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATACTGGTACTTTTG	NA	False	NA	NA	False	NA	NA	NA	48761389	48775708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_48762001_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
tx.9058	chr17	+	2631	11	FSM	ENSMUSG00000064120.15	ENSMUST00000173033.8	2588	11	-46	3	0	0	multi-exon	FALSE	canonical	3	5	junction_10	9.4387499172295	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTGGGGACTCTTGT	NA	False	NA	NA	False	NA	NA	NA	49735391	49762460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759871_49761057
tx.9059	chr17	+	2646	11	FSM	ENSMUSG00000064120.15	ENSMUST00000024797.16	2646	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	7.06328535456412	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTGGGGACTCTTGT	NA	False	NA	NA	False	NA	NA	NA	49735391	49762460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057
tx.906	chr1	+	4145	5	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	135335	0	-3142	0	3prime_fragment	FALSE	canonical	3	59	junction_1	77.8985718739439	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTGTGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	152966083	152995007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
tx.9060	chr17	-	3005	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	22	1002	22	1	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGTGAGAAGTATTT	NA	False	NA	NA	False	NA	NA	NA	50497680	50300286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
tx.9061	chr17	-	2891	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGACTTACTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	50600627	50586421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
tx.9062	chr17	-	2942	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	37	-3	0	1	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	493	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGACTTACTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	50600627	50586421	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
tx.9063	chr17	+	4100	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-736	-404	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	27.886675432304	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	NA	NA	NA	50815694	50995108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_50815976_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
tx.9064	chr17	+	3872	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-271	-404	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	30.0111090542597	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	NA	NA	NA	50816159	50995108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_50816213_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
tx.9065	chr17	+	4314	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-351	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.5085458849755	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTCCAATAGCAGTAC	NA	False	NA	NA	False	NA	NA	NA	50816079	50995506	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_50816177_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
tx.9066	chr17	+	3722	6	NNC	ENSMUSG00000038910.8	novel	4433	3	NA	NA	-104	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.1505047072042	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCCAATAGCAGTACAT	NA	False	NA	NA	False	NA	NA	NA	50816326	50995508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_50816403_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
tx.9067	chr17	+	4213	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	-35	7	-35	-7	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCTCCAATAGCAGTA	NA	False	NA	NA	False	NA	NA	NA	50816395	50995505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
tx.9068	chr17	-	5581	22	FSM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	-150	4	-7	-4	multi-exon	FALSE	canonical	2	15	junction_3	5.14990698460791	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCACATCCACTTCTTC	NA	False	NA	NA	False	NA	NA	NA	51486346	51040155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
tx.9069	chr17	-	3446	3	ISM	ENSMUSG00000023923.11	ENSMUST00000224977.2	5578	22	417138	-5	242386	-3	3prime_fragment	TRUE	canonical	3	20	junction_1	0.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCACATCCACTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	51049268	51040154	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_51043273_51048503_51048648_51049084
tx.907	chr1	+	4051	3	FSM	ENSMUSG00000042751.15	ENSMUST00000190960.2	539	3	5	-3517	5	3517	multi-exon	FALSE	canonical	3	57	junction_2	72	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATCTGAGCGTCCCACA	NA	False	NA	NA	False	NA	NA	NA	152969230	152973860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_152969301_152969782_152969860_152969956
tx.9070	chr17	-	5551	18	NNC	ENSMUSG00000023923.11	novel	4764	23	NA	NA	-7	2727	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.23505499365732	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATCATGTTTGGCTTAA	NA	False	NA	NA	False	NA	NA	NA	51486346	51102027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_51105603_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
tx.9071	chr17	-	5130	11	FSM	ENSMUSG00000023927.16	ENSMUST00000152830.9	5993	11	1674	-811	-650	234	multi-exon	FALSE	canonical	3	34	junction_1	11.1821285987955	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGGCAGGGTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	52120358	52045687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795
tx.9072	chr17	-	3828	11	FSM	ENSMUSG00000023927.16	ENSMUST00000144331.8	6243	11	-53	2468	-53	239	multi-exon	FALSE	canonical	3	5	junction_10	18.7245827723877	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGGGTTTGTCTGCTTA	NA	False	NA	NA	False	NA	NA	NA	52139753	52045682	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52139497
tx.9073	chr17	-	3460	10	FSM	ENSMUSG00000023927.16	ENSMUST00000176669.8	4407	10	1739	-792	-48	234	multi-exon	FALSE	canonical	3	34	junction_1	10.077477638554	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGGCAGGGTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	52116208	52045687	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070
tx.9074	chr17	-	4001	12	ISM	ENSMUSG00000023931.6	ENSMUST00000024725.5	2661	13	19	267	4	-8	5prime_fragment	TRUE	canonical	2	16	junction_3	7.09440473277333	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTTGTTCTGGACTTA	NA	False	NA	NA	False	NA	NA	NA	53770330	53706183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
tx.9075	chr17	-	2971	9	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	-2414	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	9.97496867163	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTTGTTCTGGACTTA	NA	False	NA	NA	False	NA	NA	NA	53772763	53706183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53772533
tx.9076	chr17	+	2365	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	1	0	1	0	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	1078	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	53786262	53814708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
tx.9077	chr17	+	4364	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	289	0	289	0	multi-exon	FALSE	canonical	3	180	junction_6	30.0116471047111	508	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	53874287	53979748	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
tx.9078	chr17	-	2800	3	ISM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	9739	1	9684	-1	3prime_fragment	FALSE	canonical	3	426	junction_1	28.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTTGCCGCTTACTTT	4030	False	NA	NA	False	NA	NA	NA	53986622	53981814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_53983740_53983934_53984125_53985937
tx.9079	chr17	-	3467	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	157.427275078925	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTTGCCGCTTACTTT	NA	False	NA	NA	False	NA	NA	NA	53996332	53981814	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53996238
tx.908	chr1	+	4016	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTCTTGTGTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	152969226	152995008	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
tx.9080	chr17	-	3588	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	34	6	-13	-6	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	676	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATAGTCAGTTGCCGCTT	NA	False	NA	NA	False	NA	NA	NA	53996327	53981819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
tx.9081	chr17	-	2267	17	FSM	ENSMUSG00000024174.10	ENSMUST00000086876.7	3523	17	-29	1285	0	-1285	multi-exon	FALSE	canonical	1	2	junction_7	6.91804705101086	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAATATGTTGAAATGT	NA	False	NA	NA	False	NA	NA	NA	56019607	55960235	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_55960519_55961766_55961873_55969462_55969555_55971316_55971406_55972647_55972784_55973411_55973618_55976739_55976897_55979830_55979894_55981051_55981141_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
tx.9082	chr17	-	2151	4	NNC	ENSMUSG00000057835.8	novel	2018	4	NA	NA	313	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	9.67241208569794	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTCTCTTGGATAGC	NA	False	NA	NA	False	NA	NA	NA	56185617	56171891	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_56173651_56175302_56175364_56175558_56175686_56185413
tx.9083	chr17	+	2154	5	FSM	ENSMUSG00000003198.11	ENSMUST00000224379.2	895	5	11	-1270	11	7	multi-exon	FALSE	canonical	3	14	junction_1	13.1624465810882	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTATGTGTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56199103	56205935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56199187_56199757_56199861_56202820_56202948_56203140_56203202_56204155
tx.9084	chr17	+	2050	4	FSM	ENSMUSG00000003198.11	ENSMUST00000054780.10	2028	4	-18	-4	9	4	multi-exon	FALSE	canonical	3	9	junction_1	17.3781471969828	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTTATGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	56199101	56205932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56199187_56202820_56202948_56203140_56203202_56204155
tx.9085	chr17	+	2304	5	NNC	ENSMUSG00000003198.11	novel	705	4	NA	NA	-71	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	13.1624465810882	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTTATGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	56199396	56205932	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_56199633_56199757_56199861_56202820_56202948_56203140_56203202_56204155
tx.9086	chr17	+	1692	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-35	3	-33	1	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCGTGTTGGAGTCT	309	False	NA	NA	False	NA	NA	NA	56266138	56275282	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
tx.9087	chr17	+	1752	13	FSM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	-4	0	-2	0	multi-exon	FALSE	canonical	3	52	junction_12	6.07533721057706	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3929	False	NA	NA	False	NA	NA	NA	56293506	56303881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
tx.9088	chr17	+	1651	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	14	36	7	-36	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	715	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAGATATTTAATACT	NA	False	NA	NA	False	NA	NA	NA	56316214	56323754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
tx.9089	chr17	+	1600	12	ISM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	125	49	-7	-49	3prime_fragment	FALSE	canonical	3	800	junction_1	72.3614663904886	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTGGCTATATAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	56316325	56323741	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
tx.909	chr1	+	4014	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	304	4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	96.3872398193869	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTGTCTTTGTCCAG	NA	False	NA	NA	False	NA	NA	NA	152969529	152995011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_152969599_152969782_152969860_152987887_152987990_152988125_152988194_152991313
tx.9090	chr17	-	2043	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	30	0	-29	0	multi-exon	FALSE	canonical	3	585	junction_1	54.5914116159513	775	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	NA	False	NA	NA	NA	56343605	56323749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
tx.9091	chr17	+	3104	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-74	-805	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	132.927611879549	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	56347364	56375027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371973_56372426_56374406
tx.9092	chr17	+	2550	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-77	-806	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	133.669030527726	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	56347361	56375026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56347552_56351061_56351113_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
tx.9093	chr17	+	3362	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-76	2249	-76	-805	multi-exon	FALSE	canonical	3	392	junction_3	50.5723455079702	808	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	56347362	56375027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
tx.9094	chr17	+	2891	12	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	6615	2249	240	-805	3prime_fragment	FALSE	canonical	3	392	junction_1	53.6086214849875	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	56354053	56375027	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
tx.9095	chr17	-	1581	11	NNC	ENSMUSG00000019578.12	novel	2949	11	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_10	74.3363302833816	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCAGTGTTTCATCA	6688	False	NA	NA	False	NA	NA	NA	56381646	56375249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381616
tx.9096	chr17	-	1720	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	24	1205	13	0	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCAGTGTTTCATCA	6330	False	NA	NA	False	NA	NA	NA	56382004	56375249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
tx.9097	chr17	+	2276	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	3	combination_of_known_junctions	FALSE	canonical	3	148	junction_6	209.929787204092	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	56386660	56407601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
tx.9098	chr17	+	2279	16	FSM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	-38	-3	23	3	multi-exon	FALSE	canonical	3	148	junction_6	179.285421108974	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	56386660	56407601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
tx.9099	chr17	+	2252	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	27	-9	23	3	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	652	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	56386660	56407601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
tx.91	chr1	+	1082	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3272	191	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	18.4867520132661	11	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGGAGTATTCGAACAT	NA	False	NA	NA	False	NA	NA	NA	21327016	21335436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
tx.910	chr1	+	4085	4	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	138892	-2	415	2	3prime_fragment	FALSE	canonical	3	223	junction_2	11.8415464455544	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTCTTGTGTCTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	152969640	152995009	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_+_152969860_152987887_152987990_152988125_152988194_152991313
tx.9100	chr17	+	2249	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	3	combination_of_known_junctions	FALSE	canonical	3	309	junction_15	154.811225547618	257	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	56386660	56407601	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
tx.9101	chr17	-	1932	9	FSM	ENSMUSG00000011305.12	ENSMUST00000019808.12	1986	9	51	3	51	-3	multi-exon	FALSE	canonical	2	6	junction_1	3.19912097301743	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTAGGTTTTGGAACTT	1144	False	NA	NA	False	NA	NA	NA	56424545	56418603	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56419542_56419869_56419984_56420898_56421099_56422092_56422274_56422550_56422634_56423257_56423454_56423828_56423890_56424082_56424198_56424501
tx.9102	chr17	-	1304	8	ISM	ENSMUSG00000011305.12	ENSMUST00000019808.12	1986	9	15	995	15	-989	5prime_fragment	FALSE	canonical	2	7	junction_2	3.09047252182628	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGCCAAGGCTCTTGTT	1108	False	NA	NA	False	NA	NA	NA	56424581	56419595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_56419984_56420898_56421099_56422092_56422274_56422550_56422634_56423257_56423454_56423828_56423890_56424082_56424198_56424501
tx.9103	chr17	-	3771	17	FSM	ENSMUSG00000001227.13	ENSMUST00000001256.11	3736	17	-35	0	-35	0	multi-exon	FALSE	canonical	2	8	junction_2	3.37036719067819	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGACTCTGGGTCAGC	8316	False	NA	NA	False	NA	NA	NA	56447378	56430084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56431918_56432332_56432392_56432516_56432595_56433216_56433367_56433449_56433633_56433939_56434090_56434477_56434610_56435249_56435468_56436407_56436497_56436972_56437093_56437705_56437797_56438112_56438215_56438522_56438586_56438742_56438804_56439497_56439622_56439715_56439869_56447213
tx.9104	chr17	-	1173	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	11	526	11	-526	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	509	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTATGCTCTCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	56490909	56483269	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
tx.9105	chr17	-	4258	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	-6	443	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	31.2881367294379	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCACGTGGGTAAGCC	NA	False	NA	NA	False	NA	NA	NA	56525895	56493363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525315
tx.9106	chr17	-	4811	20	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-15	-143	1	133	intron_retention	FALSE	canonical	3	120	junction_19	10.4521068400644	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	NA	NA	NA	56525904	56493673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408
tx.9107	chr17	-	3533	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-16	-143	0	133	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	NA	NA	NA	56525905	56493673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
tx.9108	chr17	-	2157	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	2	1486	2	-1486	multi-exon	TRUE	canonical	3	548	junction_7	40.8821102534533	752	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATGGTGTATATGTG	NA	False	NA	NA	False	NA	NA	NA	56597509	56585961	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
tx.9109	chr17	+	3539	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	47	0	-32	0	multi-exon	TRUE	canonical	3	1413	junction_6	319.856779473251	2239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	467	False	NA	NA	False	NA	NA	NA	56610367	56630486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
tx.911	chr1	-	5090	23	FSM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	-175	1	-175	-1	multi-exon	FALSE	canonical	3	71	junction_14	15.8534090501821	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGTTTCTGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	153061968	152998502	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
tx.9110	chr17	+	4676	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	40.7135319325118	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4899	False	NA	NA	False	NA	NA	NA	56633063	56709865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
tx.9111	chr17	+	4560	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	34.4730401309163	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGTCATGGCTGTGT	4898	False	NA	NA	False	NA	NA	NA	56633062	56709863	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
tx.9112	chr17	+	4679	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	44.1044901245819	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	4889	False	NA	NA	False	NA	NA	NA	56633053	56709864	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
tx.9113	chr17	+	4708	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	37.0128981759057	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4889	False	NA	NA	False	NA	NA	NA	56633053	56709866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
tx.9114	chr17	+	4589	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-10	-2	2	2	multi-exon	FALSE	canonical	3	94	junction_12	23.0595707170123	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4899	False	NA	NA	False	NA	NA	NA	56633063	56709866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
tx.9115	chr17	+	4553	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_22	39.7690907428419	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4899	False	NA	NA	False	NA	NA	NA	56633063	56709866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
tx.9116	chr17	+	4566	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	29.4305457780414	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4900	False	NA	NA	False	NA	NA	NA	56633064	56709865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
tx.9117	chr17	+	4571	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	2	17	junction_13	35.4617708255333	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4899	False	NA	NA	False	NA	NA	NA	56633063	56709866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
tx.9118	chr17	-	3970	19	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-248	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	83.052192425406	52	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGCATGGAGTGCTCCT	NA	False	NA	NA	False	NA	NA	NA	56732709	56719429	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326
tx.9119	chr17	-	5599	28	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	79.1614661493084	149	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGGAGTGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	56783445	56719428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
tx.912	chr1	-	5075	24	FSM	ENSMUSG00000026479.14	ENSMUST00000027753.13	5164	24	85	4	85	-4	multi-exon	FALSE	canonical	1	4	junction_23	24.3679264856456	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTGAGTTTCTGATTT	NA	False	NA	NA	False	NA	NA	NA	153062108	152998505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654_153061848_153061999
tx.9120	chr17	-	6817	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-1	2	intron_retention	FALSE	non_canonical	0	0	junction_13	85.5062660865415	57	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGGAGTGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	56783445	56719428	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
tx.9121	chr17	-	4126	18	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-53	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	74.9305099067055	27	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGGAGTGCTCCTTA	NA	False	NA	NA	False	NA	NA	NA	56732514	56719427	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879
tx.9122	chr17	-	5516	12	ISM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	9223	5	157	5	intron_retention	FALSE	canonical	3	139	junction_10	36.9171509336494	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGTTTCTGCTGCCAG	1494	False	NA	NA	False	NA	NA	NA	56882362	56869943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399
tx.9123	chr17	-	3394	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-4	5	intron_retention	FALSE	canonical	3	72	junction_14	53.7949322598524	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGTTTCTGCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	56891589	56869943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
tx.9124	chr17	-	3583	14	ISM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	7904	5	-1162	5	intron_retention	FALSE	canonical	3	139	junction_10	36.1888537549157	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGTTTCTGCTGCCAG	175	False	NA	NA	False	NA	NA	NA	56883681	56869943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902
tx.9125	chr17	-	4539	19	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	2	-3	intron_retention	FALSE	canonical	3	101	junction_15	44.5784438301853	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTTCTGCTGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	56891583	56869941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
tx.9126	chr17	-	2617	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	55.588067433553	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCTGCTGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	56891585	56869940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
tx.9127	chr17	-	3268	21	FSM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	5	4	5	-4	multi-exon	FALSE	canonical	3	72	junction_15	52.6718852899723	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTTCTGCTGCCAGG	NA	False	NA	NA	False	NA	NA	NA	56891580	56869942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
tx.9128	chr17	-	1143	8	ISM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	17648	7	78	3	3prime_fragment	FALSE	canonical	3	191	junction_1	27.3339140472574	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	9919	False	NA	NA	False	NA	NA	NA	56873937	56869945	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878
tx.9129	chr17	+	3136	22	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	61	0	combination_of_known_junctions	TRUE	canonical	3	80	junction_1	120.113627231518	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7889	False	NA	NA	False	NA	NA	NA	56891885	56913294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
tx.913	chr1	-	5369	17	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	85350	0	3025	0	3prime_fragment	FALSE	canonical	3	518	junction_2	127.928797945381	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	6905	False	NA	NA	False	NA	NA	NA	153123182	153094667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982
tx.9130	chr17	+	3183	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	-77	0	0	0	multi-exon	FALSE	canonical	3	422	junction_6	66.4862955803675	696	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	NA	False	NA	NA	NA	56891981	56913294	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
tx.9131	chr17	-	537	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	48	170	-41	-2	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCCGGTTTTCTGGTG	NA	False	NA	NA	False	NA	NA	NA	56916723	56914621	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
tx.9132	chr17	-	1137	3	ISM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	234	0	143	0	3prime_fragment	FALSE	canonical	3	2068	junction_2	27	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTAGCTTGGATAGGAA	NA	False	NA	NA	False	NA	NA	NA	56916537	56914451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_56914842_56915637_56915693_56915845
tx.9133	chr17	+	386	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	0	-3	0	3	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	741	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	56920415	56921246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
tx.9134	chr17	-	2509	10	ISM	ENSMUSG00000041168.11	ENSMUST00000233732.2	4362	16	7513	0	7513	0	3prime_fragment	FALSE	canonical	3	748	junction_9	59.4320859427479	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	9096	False	NA	NA	False	NA	NA	NA	56926362	56921296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317
tx.9135	chr17	-	2951	18	FSM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_15	77.1963747647298	1254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	NA	False	NA	NA	NA	56933887	56921296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
tx.9136	chr17	+	2572	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	-5	0	2	0	multi-exon	FALSE	canonical	3	89	junction_2	111.513574706176	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	NA	NA	NA	56980359	57018764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
tx.9137	chr17	+	2373	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	390	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	NA	NA	NA	56980357	57018764	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
tx.9138	chr17	-	2098	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	128	0	128	0	multi-exon	FALSE	canonical	3	64	junction_1	0	35	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTCTACCTTTTTTC	7696	False	NA	NA	False	NA	NA	NA	57023849	57020935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57022818_57023633
tx.9139	chr17	-	2098	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	128	0	128	0	multi-exon	FALSE	canonical	3	64	junction_1	0	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTCTACCTTTTTTC	7696	False	NA	NA	False	NA	NA	NA	57023849	57020935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57022818_57023633
tx.914	chr1	-	5804	20	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	82832	0	507	0	3prime_fragment	TRUE	canonical	3	518	junction_2	121.991099080415	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	4387	False	NA	NA	False	NA	NA	NA	153125700	153094667	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590
tx.9140	chr17	+	547	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	8	-10	8	6	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	453	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGCAGGCTTGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	57024774	57029147	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
tx.9141	chr17	-	1050	3	FSM	ENSMUSG00000039481.6	ENSMUST00000044752.6	1023	3	-25	-2	-25	2	multi-exon	FALSE	canonical	3	134	junction_2	5	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGTCGTTCATGCTC	NA	False	NA	NA	False	NA	NA	NA	57064555	57058322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57058831_57059308_57059491_57064195
tx.9142	chr17	+	2890	12	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-10	0	intron_retention	TRUE	canonical	3	220	junction_5	35.3256397882088	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTCTCCTTGTG	9213	False	NA	NA	False	NA	NA	NA	57071746	57077092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
tx.9143	chr17	+	2308	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	-31	-252	-10	0	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTCTCCTTGTGA	9213	False	NA	NA	False	NA	NA	NA	57071746	57077093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
tx.9144	chr17	-	3447	18	FSM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	-95	-2	-90	-1	multi-exon	FALSE	canonical	3	81	junction_12	62.8192882463543	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	57138103	57082897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
tx.9145	chr17	-	3278	16	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-88	-1	combination_of_known_junctions	TRUE	canonical	3	62	junction_15	59.2522292126353	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	57138101	57082897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57137882
tx.9146	chr17	-	3372	17	FSM	ENSMUSG00000024206.16	ENSMUST00000086801.7	3283	17	-90	1	-90	-1	multi-exon	FALSE	canonical	3	178	junction_12	29.2883695986991	343	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	57138103	57082897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
tx.9147	chr17	+	2357	12	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1694	-1	1668	1	3prime_fragment	TRUE	canonical	3	15	junction_6	15.5260378474249	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCGCACCCCGAGGTA	NA	False	NA	NA	False	NA	NA	NA	57184170	57195905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
tx.9148	chr17	-	3576	11	NIC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.9921943789302	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGGCCTGCCTTCAAT	5968	False	NA	NA	False	NA	NA	NA	57242481	57199610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57212711_57212856_57226899_57226983_57233991_57234173_57242262
tx.9149	chr17	-	3710	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	-74	0	-74	0	multi-exon	FALSE	canonical	3	105	junction_9	16.3510052260045	231	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGGCCTGCCTTCAAT	5960	False	NA	NA	False	NA	NA	NA	57242489	57199610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
tx.915	chr1	-	7603	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	18	1	18	-1	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	1309	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGTGTGGCCTAAAT	NA	False	NA	NA	False	NA	NA	NA	153208514	153094668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
tx.9150	chr17	+	985	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	552	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	NA	False	NA	NA	NA	57297302	57303188	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
tx.9151	chr17	+	737	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	-2	182	2	3	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGATCTTCAAATGACC	369	False	NA	NA	False	NA	NA	NA	57304340	57306140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
tx.9152	chr17	+	1040	3	ISM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	-2	13	2	-2	intron_retention	FALSE	canonical	3	443	junction_1	17	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAACAAGCAAGCAAAGAAA	369	False	NA	NA	False	NA	NA	NA	57304340	57306309	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_57304568_57305388_57305563_57305670
tx.9153	chr17	-	1829	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	-109	-3	-109	3	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	679	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCGAGTCATCACTG	NA	False	NA	NA	False	NA	NA	NA	57318397	57310401	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
tx.9154	chr17	-	4051	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-73	0	-39	0	multi-exon	TRUE	canonical	3	570	junction_17	70.4455420481926	1173	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	NA	False	NA	NA	NA	57338561	57328050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
tx.9155	chr17	-	3350	10	FSM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	11	1	11	-1	multi-exon	FALSE	canonical	3	34	junction_6	5.45916377623922	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGATTTTTAATTGTT	NA	False	NA	NA	False	NA	NA	NA	57366852	57350711	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57352664_57354185_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
tx.9156	chr17	-	1596	9	ISM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	-5	3293	-5	47	5prime_fragment	FALSE	canonical	3	34	junction_5	5.53257399408268	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCCTGAGAGTTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	57366868	57354003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
tx.9157	chr17	+	1170	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	36	0	-16	0	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1562	False	NA	NA	False	NA	NA	NA	57369266	57372918	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
tx.9158	chr17	+	3590	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	-28	-2694	-12	2203	multi-exon	FALSE	canonical	3	202	junction_2	10.5	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTTTGTGTGTGTGTT	1566	False	NA	NA	False	NA	NA	NA	57369270	57375121	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_57369767_57370636_57370699_57372089
tx.9159	chr17	-	2110	17	FSM	ENSMUSG00000005823.10	ENSMUST00000005975.8	2064	17	12	-58	-5	30	multi-exon	FALSE	canonical	3	88	junction_12	32.0784560686764	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCGGAGCCCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	57554677	57541913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
tx.916	chr1	-	6872	27	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	70182	1	-12143	-1	3prime_fragment	FALSE	canonical	3	518	junction_2	113.128951923518	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGTGTGGCCTAAAT	2650	False	NA	NA	False	NA	NA	NA	153138350	153094668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135
tx.9160	chr17	-	2128	17	FSM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	-5	282	-5	27	multi-exon	FALSE	canonical	3	119	junction_12	26.3293443708726	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	NA	False	NA	NA	NA	57554677	57541916	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
tx.9161	chr17	+	2018	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	-36	242	-9	-4	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTCTTGGAGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	57556445	57570423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
tx.9162	chr17	+	2020	14	FSM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	-8	4	-8	-4	multi-exon	FALSE	canonical	3	136	junction_12	68.855048845232	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTCTTGGAGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	57556446	57570423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
tx.9163	chr17	-	3572	7	FSM	ENSMUSG00000024228.13	ENSMUST00000025065.12	4113	7	51	490	51	3	multi-exon	FALSE	canonical	3	48	junction_4	5.17740818900302	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGTGTATTGTGT	NA	False	NA	NA	False	NA	NA	NA	59320316	59307102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
tx.9164	chr17	-	2778	2	ISM	ENSMUSG00000023965.14	ENSMUST00000169134.2	2063	6	371145	-1158	371145	2	3prime_fragment	FALSE	canonical	3	52	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCTCACAAATAGATGCT	NA	False	NA	NA	False	NA	NA	NA	63387561	63364774	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_63367407_63387415
tx.9165	chr17	-	2397	8	NIC	ENSMUSG00000023965.14	novel	4925	9	NA	NA	255	-529	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	21.4238089945914	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTCGCTTTTACTG	NA	False	NA	NA	False	NA	NA	NA	63806757	63366461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63797759_63797883_63806019
tx.9166	chr17	-	3262	9	FSM	ENSMUSG00000023965.14	ENSMUST00000024761.13	4925	9	-352	2015	-352	-529	multi-exon	FALSE	canonical	3	52	junction_1	4.68874983337776	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTCGCTTTTACTG	NA	False	NA	NA	False	NA	NA	NA	63807364	63366461	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
tx.9167	chr17	+	3063	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_10	30.9070689904469	58	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGACTTCCTAGGGT	NA	False	NA	NA	False	NA	NA	NA	64170994	64446491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
tx.9168	chr17	+	2785	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-12	21	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	24.9886393940413	56	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGCCATTTGATACCG	NA	False	NA	NA	False	NA	NA	NA	64170997	64446213	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
tx.9169	chr17	-	4516	9	FSM	ENSMUSG00000024083.17	ENSMUST00000172733.2	4488	9	-18	-10	4	-4	multi-exon	FALSE	canonical	3	36	junction_5	42.6614580154031	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTAATTGTGTGACC	NA	False	NA	NA	False	NA	NA	NA	64638878	64588004	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995_64620114_64638790
tx.917	chr1	-	1986	2	FSM	ENSMUSG00000073538.11	ENSMUST00000186785.7	1964	2	-1	-21	-1	21	multi-exon	FALSE	canonical	3	87	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCATGGCAACATTATT	NA	False	NA	NA	False	NA	NA	NA	153283537	153280551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_153282348_153283347
tx.9170	chr17	-	4699	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	28	13	-1	2	multi-exon	FALSE	canonical	3	104	junction_6	24	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTCTAATATTTAATT	NA	False	NA	NA	False	NA	NA	NA	64638883	64588012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
tx.9171	chr17	+	7010	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	-19	0	-19	0	multi-exon	FALSE	canonical	3	46	junction_3	8.61970531560628	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTCTGGAGTAATT	NA	False	NA	NA	False	NA	NA	NA	64907711	65062105	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
tx.9172	chr17	-	1629	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	13	1727	13	366	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	2903	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	2976	False	NA	NA	False	NA	NA	NA	65920537	65887048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
tx.9173	chr17	-	3365	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	108	0	-4	0	multi-exon	TRUE	canonical	3	62	junction_1	10.1775897605147	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCCTTTCCTCATT	NA	False	NA	NA	False	NA	NA	NA	66079639	65958723	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
tx.9174	chr17	+	4025	20	FSM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	-239	64	-239	6	multi-exon	FALSE	canonical	3	102	junction_2	67.7698974676079	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACTTTGTTTCCTAAAT	NA	False	NA	NA	False	NA	NA	NA	66090110	66148857	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
tx.9175	chr17	+	3871	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	-148	61	-137	5	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	422	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCACTTTGTTTCCTAAA	NA	False	NA	NA	False	NA	NA	NA	66090212	66148856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
tx.9176	chr17	+	4071	21	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-218	2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	101.79502689228	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACCCACTTTGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	66090131	66148853	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
tx.9177	chr17	+	3871	19	NIC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	19	-3	intron_retention	FALSE	canonical	3	102	junction_1	64.6871149418968	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACACCACCCACTTTGT	NA	False	NA	NA	False	NA	NA	NA	66090429	66148848	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
tx.9178	chr17	+	3872	19	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	19	-16	intron_retention	FALSE	canonical	3	294	junction_8	32.8404767562873	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGTATTACTTAGCATA	NA	False	NA	NA	False	NA	NA	NA	66090429	66148900	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
tx.9179	chr17	-	3806	10	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-87	3	combination_of_known_junctions	FALSE	canonical	1	23	junction_9	213.995384743125	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	NA	NA	NA	66191485	66155409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191216
tx.918	chr1	+	178	2	Antisense	novelGene_ENSMUSG00000073538.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	271	junction_1	0	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGCAAATGAAGA	NA	False	NA	NA	False	NA	NA	NA	153287687	153292537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr1_+_153287738_153292409
tx.9180	chr17	-	3760	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	54	-3	54	3	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	812	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	NA	NA	NA	66191895	66155409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
tx.9181	chr17	-	3666	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	484	-351	-360	3	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	267	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	NA	NA	NA	66192309	66155409	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
tx.9182	chr17	-	4036	5	FSM	ENSMUSG00000024098.7	ENSMUST00000024906.6	4086	5	46	4	-43	-4	multi-exon	FALSE	canonical	3	222	junction_1	25.0636689253589	466	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATGTTTTTTATTA	8740	False	NA	NA	False	NA	NA	NA	66258175	66230063	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
tx.9183	chr17	-	3943	4	NIC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	40	-3	intron_retention	FALSE	canonical	2	11	junction_2	115.274551494344	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCATGTTTTTTATTAA	8734	False	NA	NA	False	NA	NA	NA	66258181	66230062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_66233462_66236541_66236809_66255652_66255810_66258061
tx.9184	chr17	-	5850	5	ISM	ENSMUSG00000034647.16	ENSMUST00000038116.13	10821	13	91569	1798	-2550	517	3prime_fragment	FALSE	canonical	3	24	junction_3	5.8949130612758	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTGAAAGTGTGCTC	NA	False	NA	NA	False	NA	NA	NA	66292499	66274490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830
tx.9185	chr17	-	8938	12	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	8	512	intron_retention	FALSE	canonical	3	23	junction_5	19.3732370565579	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGTAAGAGTGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	66384057	66274495	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
tx.9186	chr17	-	7381	8	FSM	ENSMUSG00000034647.16	ENSMUST00000150766.2	1513	8	-41	-5827	7	-5370	multi-exon	FALSE	canonical	3	23	junction_1	22.2481368171974	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTATAGTTTCCTC	NA	False	NA	NA	False	NA	NA	NA	66384058	66288212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
tx.9187	chr17	-	3985	8	NNC	ENSMUSG00000034647.16	novel	2342	8	NA	NA	2	2272	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	25.1331149957134	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAAGTGTCTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	66384037	66327611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_66330513_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
tx.9188	chr17	-	1368	5	FSM	ENSMUSG00000034647.16	ENSMUST00000129756.8	1403	5	33	2	-12	-2	multi-exon	FALSE	canonical	2	19	junction_2	27.5170401751351	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTATCTGTGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	66384051	66343794	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
tx.9189	chr17	-	973	4	FSM	ENSMUSG00000034647.16	ENSMUST00000135136.8	943	4	-27	-3	4	3	multi-exon	FALSE	canonical	3	24	junction_1	25.5734237050888	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTAGGAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	66384061	66344130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_66344635_66356780_66356929_66359948_66360087_66383878
tx.919	chr1	-	4620	28	FSM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	-6	2	-6	-2	multi-exon	FALSE	canonical	3	83	junction_24	29.9642219210858	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	NA	False	NA	NA	NA	153363412	153331505	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
tx.9190	chr17	-	853	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	44	800	-6	3	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	976	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTTATTCGGTTTGCT	5496	False	NA	NA	False	NA	NA	NA	66408510	66386432	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
tx.9191	chr17	+	1837	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	13	1055	5	1	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	66418552	66426443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
tx.9192	chr17	+	1835	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	-2	-2	-2	2	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGAGCTGTCCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	66418637	66426444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
tx.9193	chr17	+	4183	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-50	8	7	-1	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAACTTCATGATCAA	NA	False	NA	NA	False	NA	NA	NA	66430557	66459161	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
tx.9194	chr17	+	4122	27	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	162	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	36.6042323029074	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAACTTCATGATCAAGT	NA	False	NA	NA	False	NA	NA	NA	66430769	66459163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_66430837_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
tx.9195	chr17	-	3814	8	ISM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	17508	-2	6262	0	3prime_fragment	FALSE	canonical	3	146	junction_3	28.2994194791544	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTCTTGGTGTCACC	NA	False	NA	NA	False	NA	NA	NA	66675397	66643980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224
tx.9196	chr17	-	7257	14	FSM	ENSMUSG00000052105.18	ENSMUST00000086693.12	7221	14	-38	2	-38	-2	multi-exon	FALSE	canonical	3	123	junction_12	28.2669020495577	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTTGGTGTCACCGT	NA	False	NA	NA	False	NA	NA	NA	66756783	66643978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
tx.9197	chr17	-	5163	10	ISM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	5650	-2	-1329	0	3prime_fragment	FALSE	canonical	3	146	junction_3	25.6923873050384	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTCTTGGTGTCACC	6809	False	NA	NA	False	NA	NA	NA	66687255	66643980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123
tx.9198	chr17	-	7369	15	NIC	ENSMUSG00000052105.18	novel	7274	15	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	55.073235100998	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTCTTGGTGTCACC	NA	False	NA	NA	False	NA	NA	NA	66756774	66643980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
tx.9199	chr17	-	4919	12	NIC	ENSMUSG00000052105.18	novel	5441	16	NA	NA	-35	8	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	61.8816519089076	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	66756780	66654952	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
tx.92	chr1	-	3230	10	NIC	ENSMUSG00000041670.20	novel	6605	28	NA	NA	-21385	4871	intron_retention	FALSE	canonical	2	3	junction_6	2.05480466765633	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGTTTACATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	22572995	22502400	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22572479
tx.920	chr1	-	1415	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	322	-2	-12	2	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTGTCTTAATCTTGT	NA	False	NA	NA	False	NA	NA	NA	153425469	153378758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
tx.9200	chr17	-	4797	11	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-38	10974	-38	6	5prime_fragment	FALSE	canonical	3	123	junction_9	30.9258791305922	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAGTACAGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	66756783	66654954	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
tx.9201	chr17	-	2060	6	FSM	ENSMUSG00000023460.14	ENSMUST00000070538.12	2069	6	8	1	8	-1	multi-exon	FALSE	canonical	3	199	junction_3	22.1720544830649	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAATTTGCCGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	66826716	66801507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66813027_66813089_66826342
tx.9202	chr17	-	2250	7	NIC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	101.840425284963	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAATTTGCCGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	66826716	66801507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66811983_66812174_66813027_66813089_66826342
tx.9203	chr17	+	9536	63	FSM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	-13	3	-13	-3	multi-exon	TRUE	canonical	3	108	junction_11	42.4970342357505	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTAATGGTCTCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	68004240	68129639	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
tx.9204	chr17	-	5349	18	FSM	ENSMUSG00000024043.14	ENSMUST00000024840.12	5322	18	-28	1	-28	-1	multi-exon	FALSE	canonical	3	21	junction_17	5.76530609120275	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAAAGTGTTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	68311143	68149708	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
tx.9205	chr17	+	3788	19	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_18	11.188066835078	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	NA	False	NA	NA	NA	69463787	69596984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
tx.9206	chr17	+	3967	20	FSM	ENSMUSG00000024044.20	ENSMUST00000225977.2	3188	20	-114	-665	-13	0	multi-exon	TRUE	canonical	3	30	junction_19	11.3154222706638	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	NA	False	NA	NA	NA	69463725	69596984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
tx.9207	chr17	+	3732	19	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	13.0085442007252	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	NA	False	NA	NA	NA	69463789	69596984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
tx.9208	chr17	+	3555	18	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	15.4433891972	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTCTCGTCTTCCAT	NA	False	NA	NA	False	NA	NA	NA	69463823	69596979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
tx.9209	chr17	+	3613	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-76	206	-76	-206	multi-exon	FALSE	canonical	3	85	junction_1	58	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	NA	NA	NA	69689968	69697539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_69690265_69692415_69692500_69694306
tx.921	chr1	+	1355	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	0	1437	0	104	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTAATCTTGCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	153775689	153784032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
tx.9210	chr17	+	3383	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	36	206	36	-206	multi-exon	FALSE	canonical	3	64	junction_1	68.5	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	NA	NA	NA	69690349	69697539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_69690416_69692415_69692500_69694306
tx.9211	chr17	+	5360	2	ISM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	326	208	57	-208	3prime_fragment	FALSE	canonical	3	201	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTTCTTGATCATT	NA	False	NA	NA	False	NA	NA	NA	69690370	69697537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_69692500_69694306
tx.9212	chr17	+	3928	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	-225	655	-225	-206	multi-exon	FALSE	canonical	3	41	junction_1	80	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	NA	NA	NA	69690609	69697539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_69691221_69692415_69692500_69694306
tx.9213	chr17	+	1996	5	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	199409	-5	-48111	5	3prime_fragment	FALSE	canonical	2	6	junction_2	1.78535710713571	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAATTTCCTATTTGA	3851	False	NA	NA	False	NA	NA	NA	71067955	71123093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188
tx.9214	chr17	+	2777	6	ISM	ENSMUSG00000003279.18	ENSMUST00000133717.9	2445	11	239114	-1220	-47903	-39	3prime_fragment	FALSE	canonical	2	6	junction_2	1.62480768092719	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTATCAGAGATGCTT	4059	False	NA	NA	False	NA	NA	NA	71068163	71126760	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188_71122342_71125019
tx.9215	chr17	-	6072	2	FSM	ENSMUSG00000047407.18	ENSMUST00000135007.3	1291	2	-4011	-770	26	0	multi-exon	FALSE	canonical	3	880	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	NA	False	NA	NA	NA	71158176	71151205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_71152268_71153166
tx.9216	chr17	-	1627	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	-3	7	-3	-1	multi-exon	FALSE	canonical	3	373	junction_2	253.5	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAATGAAGAGCATTTT	NA	False	NA	NA	False	NA	NA	NA	71158205	71151206	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_71152268_71153166_71153394_71157866
tx.9217	chr17	-	1373	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	15	0	15	0	multi-exon	FALSE	canonical	3	296	junction_2	292	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	NA	False	NA	NA	NA	71160526	71151205	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_71152268_71153166_71153394_71160442
tx.9218	chr17	-	960	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	360	823	0	70	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	604	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGCTGACTCAAGTGG	3404	False	NA	NA	False	NA	NA	NA	71297525	71280950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
tx.9219	chr17	-	966	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	333	638	-34	0	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	818	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTGTTTAGCGTTA	2260	False	NA	NA	False	NA	NA	NA	71309216	71301288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
tx.922	chr1	+	2469	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-17	2137	-17	1275	multi-exon	TRUE	canonical	3	152	junction_7	29.3257565972304	282	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTATTTTATCTTGTT	NA	False	NA	NA	False	NA	NA	NA	155034443	155079268	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
tx.9220	chr17	+	5745	20	NIC	ENSMUSG00000024052.18	novel	1112	11	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	6.20606440967734	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTGGGCTCCTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	71490532	71556813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
tx.9221	chr17	-	1154	4	ISM	ENSMUSG00000024053.12	ENSMUST00000233148.2	758	5	12203	-844	-48	0	3prime_fragment	FALSE	canonical	2	7	junction_2	4.49691252107735	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCCTTTTCTGTATTTG	NA	False	NA	NA	False	NA	NA	NA	71563389	71559167	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318
tx.9222	chr17	-	7226	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-174	0	-174	0	multi-exon	TRUE	canonical	3	108	junction_42	32.1184571856639	259	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	NA	NA	NA	71782512	71651483	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
tx.9223	chr17	-	2161	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	38	2	-12	1	multi-exon	TRUE	canonical	3	248	junction_10	48.8427003246135	413	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCCCCTCCCATTTC	NA	False	NA	NA	False	NA	NA	NA	71833814	71803096	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
tx.9224	chr17	-	1098	3	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	1	39	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	31	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATACTTTTTTACTGTT	NA	False	NA	NA	False	NA	NA	NA	71905740	71895512	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_71895980_71897482_71897518_71905144
tx.9225	chr17	-	1334	3	FSM	ENSMUSG00000085492.8	ENSMUST00000143828.2	781	3	-513	-40	-11	40	multi-exon	FALSE	canonical	3	25	junction_2	30	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACTTTTTTACTGTTC	NA	False	NA	NA	False	NA	NA	NA	71905761	71895511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_71895980_71897482_71897518_71904930
tx.9226	chr17	+	3434	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	14	2	14	-2	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	2220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCGTGTCTCGTGGTGTA	NA	False	NA	NA	False	NA	NA	NA	71923223	71966024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
tx.9227	chr17	+	4394	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	21	-1	intron_retention	FALSE	canonical	3	1341	junction_7	112.702872634197	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGTCTCGTGGTGTAT	NA	False	NA	NA	False	NA	NA	NA	71923230	71966025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
tx.9228	chr17	+	3520	14	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	15066	2	-5274	-2	3prime_fragment	FALSE	canonical	3	1341	junction_3	117.963739288742	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCGTGTCTCGTGGTGTA	NA	False	NA	NA	False	NA	NA	NA	71938275	71966024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
tx.9229	chr17	+	2183	15	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	12.538308644848	31	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTGTGTGTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	72089666	72157159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886
tx.923	chr1	-	5884	15	FSM	ENSMUSG00000026469.15	ENSMUST00000027741.12	7492	15	-86	1694	0	1587	multi-exon	FALSE	canonical	2	7	junction_5	3.69569523436472	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAACTTTTTACTGTAAA	NA	False	NA	NA	False	NA	NA	NA	155293161	155153140	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
tx.9230	chr17	+	4115	16	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	47	1	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	14.2289220330362	54	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGCTGTGTCTTTTACC	NA	False	NA	NA	False	NA	NA	NA	72089658	72165346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
tx.9231	chr17	+	2126	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	235	759	235	-1	multi-exon	FALSE	canonical	3	244	junction_1	49	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGTACAGAACTGCTAC	980	False	NA	NA	False	NA	NA	NA	73143682	73157431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_73143787_73153273_73153439_73155574
tx.9232	chr17	+	2169	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	248	2	25	-2	multi-exon	FALSE	canonical	3	101	junction_1	120.5	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGGTACAGAACTGCTA	1853	False	NA	NA	False	NA	NA	NA	73144555	73157430	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_73144704_73153273_73153439_73155574
tx.9233	chr17	+	2265	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	43	-1604	43	1	multi-exon	FALSE	canonical	3	29	junction_1	156.5	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTACAGAACTGCTACTT	1871	False	NA	NA	False	NA	NA	NA	73144573	73157433	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_73144815_73153273_73153439_73155574
tx.9234	chr17	+	4417	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	26	-3	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	15.992498241363	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGTGATTCTGTT	NA	False	NA	NA	False	NA	NA	NA	73415014	73550360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
tx.9235	chr17	+	4421	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	46	0	46	0	multi-exon	FALSE	canonical	3	22	junction_1	24.2866218317822	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	73415034	73550363	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
tx.9236	chr17	+	3642	6	FSM	ENSMUSG00000024065.9	ENSMUST00000024860.9	3659	6	17	0	17	0	multi-exon	FALSE	canonical	1	2	junction_5	1.35646599662505	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGGTGACTGAGCAT	NA	False	NA	NA	False	NA	NA	NA	74111852	74139089	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_74112465_74123225_74123403_74127472_74127571_74134144_74134558_74135040_74135206_74136912
tx.9237	chr17	-	1731	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-234	1666	-234	0	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	NA	NA	NA	74602092	74507696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
tx.9238	chr17	-	1508	10	NIC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	80.0302411977675	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	NA	NA	NA	74602512	74507696	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
tx.9239	chr17	-	714	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	-18	-2	-18	2	multi-exon	FALSE	canonical	3	2414	junction_1	149.934059580278	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTTGTTGTATATG	NA	False	NA	NA	False	NA	NA	NA	74623216	74606474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
tx.924	chr1	+	1489	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	6	4097	2	138	multi-exon	TRUE	canonical	3	134	junction_7	98.5478232605254	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGACGTCTCAGCAACTC	NA	False	NA	NA	False	NA	NA	NA	155433873	155562979	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
tx.9240	chr17	-	686	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	42	6	-13	2	multi-exon	FALSE	canonical	3	1923	junction_4	306.562391692132	344	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTTGTTGTATATG	NA	False	NA	NA	False	NA	NA	NA	74623416	74606474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
tx.9241	chr17	+	4818	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	-271	-2801	-221	-2	multi-exon	FALSE	canonical	3	21	junction_3	61.0152622072726	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	9620	False	NA	NA	False	NA	NA	NA	74645760	74698108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
tx.9242	chr17	+	4779	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-180	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	64.0070829413954	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTATAGTCTTCGAT	9661	False	NA	NA	False	NA	NA	NA	74645801	74698107	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
tx.9243	chr17	+	4887	17	FSM	ENSMUSG00000024068.9	ENSMUST00000024869.8	4672	17	-215	0	-189	0	multi-exon	FALSE	canonical	3	114	junction_1	37.2180546744453	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	9652	False	NA	NA	False	NA	NA	NA	74645792	74698110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
tx.9244	chr17	+	4873	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-180	-2627	-180	-2	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	9661	False	NA	NA	False	NA	NA	NA	74645801	74698108	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
tx.9245	chr17	+	3813	13	ISM	ENSMUSG00000024068.9	ENSMUST00000024869.8	4672	17	28394	0	111	0	3prime_fragment	FALSE	canonical	3	183	junction_2	21.4741446602394	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	4071	False	NA	NA	False	NA	NA	NA	74674401	74698110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
tx.9246	chr17	+	2134	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	13	1	0	-1	multi-exon	TRUE	canonical	3	152	junction_5	21.3572043468894	176	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCATTTACAATCGTAGT	NA	False	NA	NA	False	NA	NA	NA	74702615	74731215	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
tx.9247	chr17	+	1816	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	13	304	13	13	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	345	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCTTGTCCTATATTAC	NA	False	NA	NA	False	NA	NA	NA	74796500	74806968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
tx.9248	chr17	+	2820	20	FSM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	18	0	-12	0	multi-exon	FALSE	canonical	3	124	junction_5	16.0728948897983	165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	NA	False	NA	NA	NA	75024744	75170565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
tx.9249	chr17	+	6094	34	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_21	5.00871600276228	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTGTGGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	75312549	75698331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
tx.925	chr1	+	977	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	16	0	10	0	multi-exon	FALSE	canonical	3	223	junction_3	63.2525800966956	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	155433881	155448034	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
tx.9250	chr17	-	2744	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	67	6	-6	3	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	326	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCTCTGGGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	75858874	75844086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
tx.9251	chr17	+	6071	17	FSM	ENSMUSG00000024074.9	ENSMUST00000112498.3	5995	17	-82	6	-82	-6	multi-exon	FALSE	canonical	2	7	junction_5	3.24458683810435	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGAGTTCTGTAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	78507594	78684015	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_78508529_78545170_78545345_78587401_78587645_78588674_78588796_78610415_78610538_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
tx.9252	chr17	-	1912	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	27	0	-8	0	multi-exon	FALSE	canonical	3	258	junction_3	15.727267365169	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	78725533	78685313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
tx.9253	chr17	-	1731	6	ISM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	22	6118	-13	-6117	5prime_fragment	FALSE	canonical	3	258	junction_1	18.0731845561318	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTATAGTAAATAAATTCT	NA	False	NA	NA	False	NA	NA	NA	78725538	78691431	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
tx.9254	chr17	-	5520	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	568	2541	568	2142	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCTATTCAAATGTGAA	NA	False	NA	NA	False	NA	NA	NA	79044057	78959882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
tx.9255	chr17	-	6424	36	FSM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	-42	6	-2	1	multi-exon	TRUE	canonical	3	55	junction_23	13.6878912673552	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAGCATTCATACAGTA	NA	False	NA	NA	False	NA	NA	NA	79142795	79060332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
tx.9256	chr17	+	1235	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-49	2948	-27	2	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGATGTGGCATTGT	8803	False	NA	NA	False	NA	NA	NA	79142968	79152789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
tx.9257	chr17	+	3213	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	0	-901	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	40.8783561313319	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTTCTGGTGACCATT	8830	False	NA	NA	False	NA	NA	NA	79142995	79154836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153759_79153800
tx.9258	chr17	-	6356	16	FSM	ENSMUSG00000024079.5_ENSMUSG00000091549.2	ENSMUST00000024884.5	4313	16	8	-2051	8	279	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGAAATCTGTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	79189994	79157941	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
tx.9259	chr17	-	1707	14	ISM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	35	3819	10	-1029	5prime_fragment	FALSE	canonical	3	40	junction_6	9.48184188034092	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTGTAGCCCGTAAGA	NA	False	NA	NA	False	NA	NA	NA	79189967	79163811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
tx.926	chr1	-	2466	13	FSM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	-30	-3	15	0	multi-exon	FALSE	canonical	3	21	junction_7	5.99247212944893	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGTTTGACTTGATC	NA	False	NA	NA	False	NA	NA	NA	155688620	155653904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
tx.9260	chr17	-	1176	4	ISM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	-36	-10	-36	10	intron_retention	FALSE	canonical	3	141	junction_3	32.273139846559	33	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	79202565	79192315	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971
tx.9261	chr17	-	4703	4	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-1	12	intron_retention	TRUE	non_canonical	0	0	junction_3	95.3636315490461	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGTCAGTGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	79202530	79192313	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_79192646_79196359_79196517_79198274_79199066_79199107
tx.9262	chr17	-	2994	4	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-18	11	intron_retention	FALSE	canonical	3	19	junction_3	86.5678924313166	36	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTGTCAGTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	79202547	79192314	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79200136
tx.9263	chr17	+	600	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	2	0	2	0	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	79223930	79227735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
tx.9264	chr17	+	744	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	9	0	9	0	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	79223954	79227735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
tx.9265	chr17	+	578	4	ISM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	1838	0	1655	0	3prime_fragment	FALSE	canonical	3	1564	junction_2	26.0298973404728	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	79225783	79227735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_79225902_79226484_79226530_79227187_79227273_79227405
tx.9266	chr17	-	3082	15	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	1055	740	1026	99	3prime_fragment	FALSE	canonical	3	465	junction_13	59.7598937244636	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	NA	False	NA	NA	NA	79243440	79227174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003
tx.9267	chr17	-	3329	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	1	740	1	99	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	1095	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	NA	False	NA	NA	NA	79244494	79227174	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
tx.9268	chr17	+	1414	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	4	331	3	-5	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	265	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTTTTCAAACTAGTA	NA	False	NA	NA	False	NA	NA	NA	79244568	79254597	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
tx.9269	chr17	+	1283	10	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	142.310909847869	12	2	1	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCAAATCTGACTTTTAC	NA	False	NA	NA	False	NA	NA	NA	79244567	79255369	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79255207
tx.927	chr1	-	3746	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	520	-1543	90	-77	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTAGCAGTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	155911706	155880436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
tx.9270	chr17	-	5558	18	ISM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	7467	-1139	-43	-5	3prime_fragment	FALSE	canonical	3	97	junction_5	36.2608771415235	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACTTTCCTATGTGAAA	NA	False	NA	NA	False	NA	NA	NA	79320778	79256838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052
tx.9271	chr17	-	5897	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	-15	-1139	-15	-5	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACTTTCCTATGTGAAA	NA	False	NA	NA	False	NA	NA	NA	79328260	79256838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
tx.9272	chr17	-	3630	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-15	-541	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTGTTTAATATATTTA	NA	False	NA	NA	False	NA	NA	NA	79328260	79277588	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
tx.9273	chr17	+	1608	6	FSM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	24	-159	24	2	multi-exon	FALSE	canonical	3	32	junction_1	82.0351144327842	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATAACTATTGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	79359640	79397809	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_79359818_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
tx.9274	chr17	+	1724	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	338	-3	56	3	multi-exon	TRUE	canonical	3	226	junction_1	6.47216261298253	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAACTATTGCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	79359672	79397810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
tx.9275	chr17	-	2272	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-8	1	-8	-1	multi-exon	FALSE	canonical	3	71	junction_1	0	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGAACGTGTTCATTT	NA	False	NA	NA	False	NA	NA	NA	79662528	79641156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_79643146_79662245
tx.9276	chr17	-	1882	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10317	-218	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGGCTTCCTTGCAAGC	NA	False	NA	NA	False	NA	NA	NA	79650119	79641373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_79643146_79650009
tx.9277	chr17	-	2875	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	70	673	-2	0	multi-exon	TRUE	canonical	3	301	junction_5	41.6619997386374	549	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3821	False	NA	NA	False	NA	NA	NA	80203482	80156491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
tx.9278	chr17	-	3047	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	-65	27	-24	-27	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	719	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGTTTCTTTCTCTTT	3505	False	NA	NA	False	NA	NA	NA	80369721	80336942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
tx.9279	chr17	+	2328	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	-13	-1	-13	1	multi-exon	FALSE	canonical	3	126	junction_3	8.09149072929224	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTCTTGTTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	80434886	80492531	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
tx.928	chr1	-	3707	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	450	77	73	-77	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTAGCAGTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	155911723	155880436	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
tx.9280	chr17	-	2278	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	-1	-1237	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	709	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	80514733	80507508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
tx.9281	chr17	-	3143	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	1	-1223	0	-9	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	NA	False	NA	NA	NA	80514733	80507517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
tx.9282	chr17	-	2251	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTGATATTCAGTCTT	NA	False	NA	NA	False	NA	NA	NA	80514733	80507511	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
tx.9283	chr17	-	2236	7	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	782.029553292088	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCTGATATTCAGTC	NA	False	NA	NA	False	NA	NA	NA	80514732	80507513	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
tx.9284	chr17	-	3118	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234889.2	1898	7	1	-1221	0	-9	multi-exon	FALSE	canonical	3	229	junction_3	729.529623951092	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	NA	False	NA	NA	NA	80514732	80507517	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80512868_80513276_80513458_80514603
tx.9285	chr17	-	4526	6	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-11	intron_retention	FALSE	canonical	3	1956	junction_1	145.974792344432	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACAAATAATCCTGATAT	NA	False	NA	NA	False	NA	NA	NA	80514732	80507519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
tx.9286	chr17	+	1095	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	17	22	17	-22	multi-exon	FALSE	canonical	3	317	junction_1	34	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTTTCGGGTTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	80531886	80535904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_80532100_80533049_80533194_80535166
tx.9287	chr17	+	3766	3	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	22	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGCCTTGGGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	80540175	80553793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr17_+_80540458_80549334_80549558_80550532
tx.9288	chr17	-	4751	24	FSM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	-12	-2	-12	0	multi-exon	FALSE	canonical	3	55	junction_22	13.7365159867987	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGGAGTAGACGTG	866	False	NA	NA	False	NA	NA	NA	80597584	80545737	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
tx.9289	chr17	-	5080	24	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	24.1990016822938	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTGTGGAGTAGACG	864	False	NA	NA	False	NA	NA	NA	80597586	80545739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_80546360_80549380_80549577_80553098_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597155
tx.929	chr1	+	2667	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	155911467	155929276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_155911838_155916820_155916881_155927039
tx.9290	chr17	+	645	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	2	-3	2	0	multi-exon	FALSE	canonical	3	50	junction_3	10.1242283656583	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGAATTATGTATTG	NA	False	NA	NA	False	NA	NA	NA	80597642	80604905	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
tx.9291	chr17	-	8417	21	NIC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	13	-267	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	28.2543801913969	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTGTGTTATTTTGCA	NA	False	NA	NA	False	NA	NA	NA	80787869	80701446	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
tx.9292	chr17	-	9690	16	ISM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	31823	270	31823	-270	3prime_fragment	FALSE	canonical	3	87	junction_5	15.6546052861983	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATAAGTGTGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	80755575	80701449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030
tx.9293	chr17	-	6777	13	ISM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	45954	274	45954	-274	3prime_fragment	FALSE	canonical	3	87	junction_5	16.3220624377626	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCCTATAAGTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	80741444	80701453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925
tx.9294	chr17	-	6259	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-482	2659	2	-2659	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCTCAAGTTAATTTCA	NA	False	NA	NA	False	NA	NA	NA	80787880	80703838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
tx.9295	chr17	-	2886	7	NNC	ENSMUSG00000033966.9	novel	2931	10	NA	NA	13475	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	2.23606797749979	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTATTCAAATCAATGAT	NA	False	NA	NA	False	NA	NA	NA	80857788	80830978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_80832816_80841226_80841362_80842822_80842880_80846932_80847016_80851048_80851247_80855120_80855212_80857303
tx.9296	chr17	-	4300	34	FSM	ENSMUSG00000024242.16	ENSMUST00000025089.9	4220	34	-77	-3	-77	-2	multi-exon	FALSE	canonical	3	139	junction_19	37.8671982269756	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	NA	False	NA	NA	NA	81035599	80887942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
tx.9297	chr17	-	4151	32	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-82	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_30	56.6641161614103	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	NA	False	NA	NA	NA	81035604	80887942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222
tx.9298	chr17	-	4016	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-98	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_33	52.9802361056886	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	NA	False	NA	NA	NA	81035620	80887942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
tx.9299	chr17	-	4232	33	FSM	ENSMUSG00000024242.16	ENSMUST00000234133.2	4088	33	-141	-3	-72	-2	multi-exon	FALSE	canonical	3	111	junction_19	35.3232837516559	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	NA	False	NA	NA	NA	81035594	80887942	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
tx.93	chr1	-	2281	7	FSM	ENSMUSG00000026158.12	ENSMUST00000027343.6	4844	7	-77	2640	-77	660	multi-exon	FALSE	canonical	3	39	junction_5	10.9201648339208	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTGTGTATGTGAA	NA	False	NA	NA	False	NA	NA	NA	23422333	23408144	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
tx.930	chr1	+	2495	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	72	junction_1	87	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	NA	False	NA	NA	NA	155911467	155929275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_155911667_155916820_155916881_155927039
tx.9300	chr17	+	1757	4	FSM	ENSMUSG00000024245.5	ENSMUST00000025092.5	1696	4	-65	4	-65	-4	multi-exon	FALSE	canonical	2	2	junction_2	0.471404520791032	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGCTGTGCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	81251995	81309241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_81252518_81293608_81293723_81297133_81297272_81308258
tx.9301	chr17	-	1972	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.3007399519289	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTATAGACTCTTGTG	8154	False	NA	NA	False	NA	NA	NA	81372506	81333755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81371345_81371470_81372363
tx.9302	chr17	-	1851	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	-16	-2	-1	2	multi-exon	FALSE	canonical	3	99	junction_3	16.3940669785982	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGCTTATAGACTCTT	8148	False	NA	NA	False	NA	NA	NA	81372512	81333758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
tx.9303	chr17	+	2669	3	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTGTCTCACCC	NA	False	NA	NA	False	NA	NA	NA	82422119	82448162	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_+_82422265_82441348_82441520_82445809
tx.9304	chr17	+	5466	24	FSM	ENSMUSG00000032624.17	ENSMUST00000096766.12	5441	24	-21	-4	-21	0	multi-exon	FALSE	canonical	3	134	junction_6	101.418055237548	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	83658338	83787790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
tx.9305	chr17	+	5293	23	NIC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_3	107.479269575252	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	83658337	83787790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
tx.9306	chr17	+	5252	22	FSM	ENSMUSG00000032624.17	ENSMUST00000112363.10	5081	22	-74	-97	-14	0	multi-exon	FALSE	canonical	3	110	junction_3	90.7300948604083	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	83658345	83787790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
tx.9307	chr17	+	5429	23	FSM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	-301	-2194	-17	0	multi-exon	FALSE	canonical	3	198	junction_4	84.4550347377939	276	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	83658342	83787790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
tx.9308	chr17	+	5115	21	FSM	ENSMUSG00000032624.17	ENSMUST00000049503.10	5052	21	-57	-6	-6	0	multi-exon	FALSE	canonical	3	67	junction_3	95.8126296476618	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	83658353	83787790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
tx.9309	chr17	+	5161	22	NIC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	112.735940543597	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	83658340	83787790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
tx.931	chr1	+	2437	2	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	155911466	155929276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_155911667_155927039
tx.9310	chr17	-	1068	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	0	8	0	-8	multi-exon	TRUE	canonical	0	0	junction_1	644	301	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTAGTTTGTTTGTTT	9947	False	NA	NA	False	NA	NA	NA	83821759	83809354	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_83810167_83811528_83811658_83821632
tx.9311	chr17	+	1722	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	4	-3	4	1	multi-exon	FALSE	canonical	3	649	junction_11	147.297388673592	889	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84013595	84100305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
tx.9312	chr17	+	2108	17	NIC	ENSMUSG00000055817.19	novel	2087	17	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_15	404.890412449776	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTTTATTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	84013601	84122334	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
tx.9313	chr17	-	3537	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	0	-7	0	7	multi-exon	FALSE	canonical	3	151	junction_1	0	325	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGAGTAATGGTTGGG	NA	False	NA	NA	False	NA	NA	NA	84495375	84491351	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_84494585_84495071
tx.9314	chr17	-	7884	38	FSM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-106	6	-17	-6	multi-exon	FALSE	canonical	2	39	junction_31	15.529655412283	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAATAAAACCATCTCAC	NA	False	NA	NA	False	NA	NA	NA	84773650	84497509	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
tx.9315	chr17	-	6466	38	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-17	84	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_37	16.4770908096234	39	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCTGGGAATATTAAGA	NA	False	NA	NA	False	NA	NA	NA	84773650	84498880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
tx.9316	chr17	-	4040	13	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	13712	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	23.3789732214417	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCATCTCACATTGGC	NA	False	NA	NA	False	NA	NA	NA	84662496	84497503	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84662339
tx.9317	chr17	+	6902	30	FSM	ENSMUSG00000040852.7	ENSMUST00000047206.7	6882	30	-31	11	-31	-11	multi-exon	FALSE	canonical	1	1	junction_17	2.89449845123218	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTTTCGAACATTATCTT	NA	False	NA	NA	False	NA	NA	NA	84819291	84929555	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_84819393_84829123_84829254_84854890_84854954_84864799_84864950_84866917_84867002_84867515_84867598_84871245_84871426_84873398_84874364_84877303_84877380_84878469_84878565_84879095_84879241_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
tx.9318	chr17	+	1367	13	FSM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	-18	5	-18	-5	multi-exon	FALSE	canonical	3	61	junction_6	7.6412622575651	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCAACATCTAAGTATAA	NA	False	NA	NA	False	NA	NA	NA	84933905	84963011	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
tx.9319	chr17	-	4398	38	FSM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	-9	4	-5	-4	multi-exon	FALSE	canonical	3	476	junction_25	55.1799102769645	1350	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	85097995	85012678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
tx.932	chr1	+	2494	2	FSM	ENSMUSG00000050565.17	ENSMUST00000131359.2	621	2	-13	-1860	-13	0	multi-exon	FALSE	canonical	3	246	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	NA	False	NA	NA	NA	155916622	155929275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_155916881_155927039
tx.9320	chr17	+	2595	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	-4	79	-4	-79	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	1168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCAGTTTCCACTTAT	NA	False	NA	NA	False	NA	NA	NA	85265422	85322040	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
tx.9321	chr17	+	3266	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-12	69	-2	-69	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	989	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACATATTACTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	85265424	85324556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
tx.9322	chr17	-	2945	13	ISM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	6044	-1	-172	0	3prime_fragment	FALSE	canonical	3	148	junction_9	17.7615377212172	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	NA	False	NA	NA	NA	85391608	85371956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620
tx.9323	chr17	-	2325	15	NIC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	52.4877050715067	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	NA	False	NA	NA	NA	85397675	85371956	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85395871_85397533
tx.9324	chr17	-	2229	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-32	1058	-12	1	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTGTAATTTTGCT	NA	False	NA	NA	False	NA	NA	NA	85397681	85371955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
tx.9325	chr17	-	3742	15	NNC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-60	10	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	51.2963080980473	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTGTCTGCGAATCACT	NA	False	NA	NA	False	NA	NA	NA	85397729	85370887	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397672
tx.9326	chr17	-	2767	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-31	-2	-14	1	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTGTAATTTTGCT	NA	False	NA	NA	False	NA	NA	NA	85397683	85371955	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
tx.9327	chr17	-	5000	14	ISM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	14	-1050	11	-10	intron_retention	FALSE	canonical	3	148	junction_9	20.4317307466053	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTACAAATTCCAATTTT	NA	False	NA	NA	False	NA	NA	NA	85397638	85370907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767
tx.9328	chr17	+	475	3	ISM	ENSMUSG00000071037.7	ENSMUST00000234822.2	741	4	22	89173	22	-52660	5prime_fragment	FALSE	canonical	3	95	junction_2	7	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTATGCTCACTATG	2249	False	NA	NA	False	NA	NA	NA	85398055	85421276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_85398292_85403917_85404091_85421210
tx.9329	chr17	+	4493	4	NNC	ENSMUSG00000071037.7	novel	741	4	NA	NA	27	-36019	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	37.6769897358528	24	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCAGTCCATCTGTGAT	2254	False	NA	NA	False	NA	NA	NA	85398060	85437917	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_85398292_85403917_85404091_85421210_85421276_85433893
tx.933	chr1	+	5090	5	FSM	ENSMUSG00000050565.17	ENSMUST00000060404.5	5135	5	1	44	1	-44	multi-exon	FALSE	canonical	3	13	junction_1	13.683932183404	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTTTTTACTAAAATT	NA	False	NA	NA	False	NA	NA	NA	155916636	155944563	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_155916749_155935156_155935334_155937333_155937916_155939338_155939441_155940446
tx.9330	chr17	+	1046	8	ISM	ENSMUSG00000071037.7	ENSMUST00000095188.7	1595	11	301021	-1	299490	1	3prime_fragment	TRUE	canonical	3	62	junction_3	5.28764443523479	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTCAATCTATCG	7751	False	NA	NA	False	NA	NA	NA	85699000	85766017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85738898_85738974_85746954_85747019_85759623_85759756_85765489
tx.9331	chr17	-	3532	21	FSM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	-3	1	-3	-1	multi-exon	FALSE	canonical	3	77	junction_9	11.0027269347194	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTGTGCTGTTCATT	NA	False	NA	NA	False	NA	NA	NA	86452606	86292093	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
tx.9332	chr17	-	3575	22	NNC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	28.8156231245209	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTGCTGTTCATTG	NA	False	NA	NA	False	NA	NA	NA	86452606	86292092	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_86292912_86295752_86295938_86304933_86304976_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
tx.9333	chr17	+	5551	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	-35	0	-35	0	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTCGTGCCTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	87061092	87140838	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
tx.9334	chr17	+	4125	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	18	8	18	-8	multi-exon	FALSE	canonical	3	30	junction_4	3.74165738677394	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGACTTCTTACCTCA	NA	False	NA	NA	False	NA	NA	NA	87270527	87307489	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
tx.9335	chr17	-	950	6	FSM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	38	0	38	0	multi-exon	FALSE	canonical	3	301	junction_5	28.3760462362183	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	87332796	87304683	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
tx.9336	chr17	+	1166	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	18	0	18	0	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTCTTCAATGAT	NA	False	NA	NA	False	NA	NA	NA	87332995	87343238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
tx.9337	chr17	+	4461	2	FSM	ENSMUSG00000037104.10	ENSMUST00000234803.2	978	2	-89	-3394	-77	-203	multi-exon	FALSE	canonical	3	48	junction_1	0	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACGTGCAGCGAAGTCT	NA	False	NA	NA	False	NA	NA	NA	87415029	87445064	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_87415476_87441049
tx.9338	chr17	-	1937	5	FSM	ENSMUSG00000024150.13	ENSMUST00000151155.8	603	5	-22	-1312	-13	0	multi-exon	FALSE	canonical	3	42	junction_4	129.331695651143	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	NA	False	NA	NA	NA	87573345	87562085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177_87566310_87573262
tx.9339	chr17	-	1808	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	15	215	15	0	multi-exon	FALSE	canonical	3	165	junction_3	69.8108555710038	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	NA	False	NA	NA	NA	87573348	87562085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
tx.934	chr1	+	2413	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-30	206	-3	1	multi-exon	FALSE	canonical	3	163	junction_1	41.5	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	155916632	155929276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_155916749_155916820_155916881_155927039
tx.9340	chr17	+	4614	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	NA	False	NA	NA	NA	87590313	87689197	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
tx.9341	chr17	-	1131	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	72	2	-7	-2	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	1884	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCTCTGAATCTGA	NA	False	NA	NA	False	NA	NA	NA	87754291	87740841	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
tx.9342	chr17	+	1543	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	-23	225	-23	-202	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	230	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAAGTTTGTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	87944086	87958332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
tx.9343	chr17	+	3083	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	200	0	-10	0	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	2950	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4861	False	NA	NA	False	NA	NA	NA	87979957	88031141	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
tx.9344	chr2	-	188	1	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTCTTACCCACTGA	764	False	NA	NA	False	NA	NA	NA	31036024	31035836	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr2_-_31035800_31036000
tx.9345	chr17	+	4250	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	0	1	0	-1	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	4337	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTTTCCATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	88282489	88298319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
tx.9346	chr17	+	3908	9	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	5128	0	487	0	3prime_fragment	FALSE	canonical	3	2207	junction_1	241.863468717374	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	88287617	88298320	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
tx.9347	chr17	+	3291	7	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	9629	1	4988	-1	3prime_fragment	FALSE	canonical	3	2616	junction_4	121.673972383397	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTTTCCATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	88292118	88298319	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
tx.9348	chr17	-	4783	23	FSM	ENSMUSG00000005371.16	ENSMUST00000005504.15	4019	23	-766	2	-766	-2	multi-exon	FALSE	canonical	3	35	junction_20	20.0647711505094	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCTGAATTTACCA	NA	False	NA	NA	False	NA	NA	NA	88373485	88298288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436
tx.9349	chr17	-	4788	23	FSM	ENSMUSG00000005371.16	ENSMUST00000130379.9	3753	23	-1035	0	-772	0	multi-exon	FALSE	canonical	3	18	junction_20	22.0632542949277	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGAATTTACCACC	NA	False	NA	NA	False	NA	NA	NA	88373491	88298286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372436
tx.935	chr1	+	2350	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-27	206	0	1	multi-exon	FALSE	canonical	3	145	junction_1	0	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	155916635	155929276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_155916749_155927039
tx.9350	chr17	+	5014	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	115.789410137542	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTGTTATTTGTG	NA	False	NA	NA	False	NA	NA	NA	88748138	88797959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88793830
tx.9351	chr17	+	5079	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	4	2	4	-2	multi-exon	FALSE	canonical	3	257	junction_4	10.9288608738514	472	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTGTTATTTGTG	NA	False	NA	NA	False	NA	NA	NA	88748142	88797959	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
tx.9352	chr17	+	5084	6	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	183	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	100.061181284252	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGCTTTGTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	88748385	88797958	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_88748562_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
tx.9353	chr17	+	3048	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	93	0	-5	0	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCGGTCTGTGACAGTG	NA	False	NA	NA	False	NA	NA	NA	88837638	88895795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
tx.9354	chr17	+	4549	2	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	533	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATTTTGGAGAAATT	NA	False	NA	NA	False	NA	NA	NA	94990734	94995332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr17_+_94992676_94992724
tx.9355	chr17	-	6999	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	0	-68	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGAATTAAAGACTTGT	NA	False	NA	NA	False	NA	NA	NA	95057447	95030085	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
tx.9356	chr17	-	7053	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-4	-69	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGAATTAAAGACTTG	NA	False	NA	NA	False	NA	NA	NA	95057451	95030086	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
tx.9357	chr17	-	6957	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	9	-4406	9	-89	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATGATATTAAATTT	NA	False	NA	NA	False	NA	NA	NA	95057438	95030106	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
tx.9358	chr17	+	6624	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-9	16909	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	71.1244507887407	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCAAGATTCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	95057518	95099469	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95093195
tx.9359	chr17	-	7090	3	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	11362	18320	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	9	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCTATCATCTTTCT	NA	False	NA	NA	False	NA	NA	NA	95130864	95122165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_95126373_95127763_95127825_95128042
tx.936	chr1	-	3511	18	FSM	ENSMUSG00000060985.16	ENSMUST00000167528.9	3210	18	-299	-2	17	0	multi-exon	FALSE	canonical	2	2	junction_17	3.94424814452711	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTGATCTATATTTA	NA	False	NA	NA	False	NA	NA	NA	156131217	156082865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129314_156129477_156129936_156130173_156130880
tx.9360	chr17	-	4499	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	3	18320	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	21	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCTATCATCTTTCT	NA	False	NA	NA	False	NA	NA	NA	95142223	95122165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
tx.9361	chr17	-	4374	3	ISM	ENSMUSG00000066057.8	ENSMUST00000234189.2	1909	5	1	54794	1	18320	5prime_fragment	FALSE	canonical	3	15	junction_2	22	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCTATCATCTTTCT	NA	False	NA	NA	False	NA	NA	NA	95142225	95122165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr17_-_95126373_95127763_95127825_95142119
tx.9362	chr17	+	3104	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-25	0	-25	0	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTCGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	95172320	95185749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
tx.9363	chr18	+	4137	3	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0.5	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCTTGTTTTCTTGGTA	21	False	NA	NA	False	NA	NA	NA	3000114	3013938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_3000266_3001024_3001087_3010014
tx.9364	chr18	-	1492	4	FSM	ENSMUSG00000063889.17	ENSMUST00000149803.8	1422	4	-71	1	19	-1	multi-exon	FALSE	canonical	3	52	junction_2	16.5797734872612	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTGTATGGAAGATCT	29	False	NA	NA	False	NA	NA	NA	3337660	3294184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_3295183_3295321_3295417_3325360_3325479_3337379
tx.9365	chr18	-	1294	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	-31	-7	-16	7	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGTA	84	False	NA	NA	False	NA	NA	NA	3337605	3294474	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
tx.9366	chr18	+	2864	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	11	20	combination_of_known_junctions	FALSE	canonical	3	200	junction_1	171.970666103263	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATAATGCCTTTTTCTA	-24	True	NA	NA	False	NA	NA	NA	3382998	3435405	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
tx.9367	chr18	+	2850	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	5	973	5	19	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	1155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	-7	True	NA	NA	False	NA	NA	NA	3383236	3435404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
tx.9368	chr18	+	1448	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	-21	3647	-21	-3647	multi-exon	FALSE	canonical	3	117	junction_2	19.5	91	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGGTGTCTTTCATGA	NA	False	NA	NA	False	NA	NA	NA	3507901	3512757	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_3508286_3511256_3511545_3511981
tx.9369	chr18	-	2510	8	FSM	ENSMUSG00000024235.12	ENSMUST00000025078.10	2569	8	57	2	-1	-2	multi-exon	FALSE	canonical	2	4	junction_5	7.63450812336422	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTGGGATTGTATA	-5	True	NA	NA	False	NA	NA	NA	4352958	4331328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_4332437_4333817_4334065_4334616_4334770_4339496_4339604_4340546_4340809_4343021_4343190_4348980_4349339_4352851
tx.937	chr1	-	3685	18	NIC	ENSMUSG00000060985.16	novel	3759	18	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	4.86211254582866	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTGATCTATATTTA	NA	False	NA	NA	False	NA	NA	NA	156131214	156082865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128307_156129083_156129477_156129936_156130173_156130880
tx.9370	chr18	+	2623	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	1	2	1	-2	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGTGATAACAGTATT	-7	True	NA	NA	False	NA	NA	NA	4375596	4397326	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
tx.9371	chr18	+	2651	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	-2	2	-2	0	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	-14	True	NA	NA	False	NA	NA	NA	4375589	4397328	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
tx.9372	chr18	+	6719	4	FSM	ENSMUSG00000033960.7	ENSMUST00000037029.7	6782	4	62	1	62	-1	multi-exon	TRUE	canonical	3	21	junction_2	13.6950923894494	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTTGGTATTGTGTCT	-4	True	NA	NA	False	NA	NA	NA	4634939	4682868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_4635032_4649074_4649406_4672514_4676168_4680225
tx.9373	chr18	+	4608	2	ISM	ENSMUSG00000033960.7	ENSMUST00000234153.2	4575	3	25135	-2059	25135	-1	3prime_fragment	FALSE	canonical	3	23	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTTGGTATTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	4674202	4682868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_4676168_4680225
tx.9374	chr18	+	7750	36	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	29.912716564112	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTGATCAGTTCACA	-31	True	NA	NA	False	NA	NA	NA	4920516	5119288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5055979_5056850_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
tx.9375	chr18	+	6703	34	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	17.6671084720473	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-17	True	NA	NA	False	NA	NA	NA	4920530	5119290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
tx.9376	chr18	+	6809	35	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	19.7669816616964	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTGATCAGTTCACA	-17	True	NA	NA	False	NA	NA	NA	4920530	5119288	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
tx.9377	chr18	-	3223	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	-10	-2	-10	2	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTTTTCTTAAAT	352	False	NA	NA	False	NA	NA	NA	5334449	5210026	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
tx.9378	chr18	-	3213	5	FSM	ENSMUSG00000050945.9	ENSMUST00000234241.2	3112	5	-6	-95	-6	0	multi-exon	FALSE	canonical	3	8	junction_4	6.20483682299543	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTGTTTTCTTAA	-12	True	NA	NA	False	NA	NA	NA	5334813	5210028	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334717
tx.9379	chr18	+	5230	8	FSM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	15	556	7	-556	multi-exon	FALSE	canonical	3	32	junction_5	9.45666809339164	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTCGTTCTTTGGAT	-7	True	NA	NA	False	NA	NA	NA	5591878	5774911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
tx.938	chr1	-	3077	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	28	5266	-7	2	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACATGTACTCATATGTGA	1727	False	NA	NA	False	NA	NA	NA	156301873	156257360	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
tx.9380	chr18	+	3971	3	ISM	ENSMUSG00000024238.16	ENSMUST00000177030.2	2768	7	35638	-2107	35638	-556	3prime_fragment	FALSE	canonical	3	53	junction_1	5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTCGTTCTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	5766718	5774911	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_5768026_5770383_5770565_5772428
tx.9381	chr18	-	4814	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-52	-331	1	-27	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACCAGTAATATTTTC	-12	True	NA	NA	False	NA	NA	NA	6135959	6024453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
tx.9382	chr18	-	4890	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	140	-765	2	-25	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGTAATATTTTCCT	-11	True	NA	NA	False	NA	NA	NA	6135958	6024451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
tx.9383	chr18	-	4749	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	1	-26	combination_of_known_junctions	FALSE	canonical	3	59	junction_14	38.8663756441135	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACCAGTAATATTTTCC	-12	True	NA	NA	False	NA	NA	NA	6135959	6024452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
tx.9384	chr18	-	4675	17	FSM	ENSMUSG00000041225.17	ENSMUST00000182383.8	2500	17	-77	-2098	5	-31	multi-exon	FALSE	canonical	3	59	junction_13	36.3438440454501	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACAAAACCAGTAATAT	-18	True	NA	NA	False	NA	NA	NA	6135965	6024457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
tx.9385	chr18	-	3881	15	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	-1	-24	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	49.5805364214299	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTAATATTTTCCTT	-9	True	NA	NA	False	NA	NA	NA	6135956	6024450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6135803
tx.9386	chr18	-	4069	16	NIC	ENSMUSG00000041225.17	novel	4431	18	NA	NA	-35	-26	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	48.531593375404	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACCAGTAATATTTTCC	57	False	NA	NA	False	NA	NA	NA	6136005	6024452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
tx.9387	chr18	-	4094	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	-26	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	49.2946735839685	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACCAGTAATATTTTCC	-8	True	NA	NA	False	NA	NA	NA	6135955	6024452	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
tx.9388	chr18	-	5839	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-18	intron_retention	FALSE	canonical	0	0	junction_1	281.066818057589	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-1	True	NA	NA	False	NA	NA	NA	6241519	6201019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_6202210_6202380_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
tx.9389	chr18	-	6010	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	4	18	4	-18	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	987	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-1	True	NA	NA	False	NA	NA	NA	6241519	6201019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
tx.939	chr1	-	3265	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	20	0	-1	0	multi-exon	FALSE	canonical	3	42	junction_5	7.96492310069595	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGATGGTTCTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	156501906	156481186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
tx.9390	chr18	-	4010	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	-43	-2	-43	0	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTGGTCTTTGCCTT	14	False	NA	NA	False	NA	NA	NA	6490899	6435950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
tx.9391	chr18	+	2225	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	44	4246	-14	943	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	807	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTGTCTTGTCTGTC	-7	True	NA	NA	False	NA	NA	NA	6765188	6790183	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
tx.9392	chr18	-	3182	7	FSM	ENSMUSG00000061013.7	ENSMUST00000079788.7	3650	7	10	458	10	-458	multi-exon	FALSE	canonical	2	10	junction_4	2.3392781412697	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTGATTAGATAAGTGA	NA	False	NA	NA	False	NA	NA	NA	7004770	6934975	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_6937055_6937167_6937202_6992037_6992374_6992777_6992935_7000592_7000753_7002356_7002624_7004621
tx.9393	chr18	-	4843	17	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-10	-147	combination_of_known_junctions	FALSE	canonical	3	86	junction_16	10.4634781502137	155	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-32	True	NA	NA	False	NA	NA	NA	7626876	7348110	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
tx.9394	chr18	+	3224	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	106	junction_6	160.217733794428	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	-4	True	NA	NA	False	NA	NA	NA	7868838	7927519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
tx.9395	chr18	+	3527	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-5	-452	0	0	multi-exon	FALSE	canonical	3	146	junction_1	117.532571338518	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	2	True	NA	NA	False	NA	NA	NA	7868844	7927519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
tx.9396	chr18	+	3714	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	153.568094874273	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTACCTTGGCTTTTT	-16	True	NA	NA	False	NA	NA	NA	7869168	7927518	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917564_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
tx.9397	chr18	+	3708	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-9	1509	-8	0	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	478	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	3	True	NA	NA	False	NA	NA	NA	7869187	7927519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
tx.9398	chr18	+	3398	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	-304	0	-7	0	multi-exon	FALSE	canonical	3	106	junction_6	129.708862029118	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	4	True	NA	NA	False	NA	NA	NA	7869188	7927519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
tx.9399	chr18	-	4019	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	-2	1740	-2	1257	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAATAGTAGTGTTGAT	16	False	9450168	NA	False	NA	NA	NA	9450152	9314043	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
tx.94	chr1	-	2280	7	NNC	ENSMUSG00000026158.12	novel	4844	7	NA	NA	-82	651	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	17.2046505340853	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGGATTTTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	23422338	23408153	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417889_23418052_23418140_23421895
tx.940	chr1	-	4525	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	-6	13	-6	-13	multi-exon	FALSE	canonical	3	105	junction_8	37.6710681425414	209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTATAATGTCTTC	NA	False	NA	NA	False	NA	NA	NA	156546648	156506114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
tx.9400	chr18	+	1073	2	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	9592763	9597950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_9592989_9597102
tx.9401	chr18	+	4679	2	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	9593213	9597949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_+_9597506_9597562
tx.9402	chr18	+	3351	10	FSM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	7	4666	1	-21	multi-exon	FALSE	canonical	3	13	junction_7	3.52066211505664	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTCCAGCTGAAGAAA	7	False	NA	NA	False	NA	NA	NA	9707601	9877978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
tx.9403	chr18	+	2300	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_16	182.47716815401	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTACAGTTGGCTGGTGC	9	True	NA	NA	False	NA	NA	NA	9958175	9993728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
tx.9404	chr18	+	1981	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	237.141378171329	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	9	True	NA	NA	False	NA	NA	NA	9958175	9993725	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
tx.9405	chr18	+	2102	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	270	1762	-1	2	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	420	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACAGTTGGCTGGTG	9	True	NA	NA	False	NA	NA	NA	9958175	9993727	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
tx.9406	chr18	-	4112	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	36	578	-24	-578	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	1025	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGAAAAGAAAGG	-24	True	NA	NA	False	NA	NA	NA	10030105	9993643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
tx.9407	chr18	+	3187	2	Antisense	novelGene_ENSMUSG00000047879.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATATTTGGCCTAT	NA	False	NA	NA	False	NA	NA	NA	10039513	10047412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr18_+_10039644_10044355
tx.9408	chr18	-	6590	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-160	10	-160	-10	multi-exon	TRUE	canonical	3	139	junction_22	28.5588755906111	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAAAACTTGACTTGG	-2	True	NA	NA	False	NA	NA	NA	10182205	10064410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
tx.941	chr1	-	4989	9	NNC	ENSMUSG00000033557.18	novel	4532	9	NA	NA	230	-13	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_8	63.7945922473057	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTATAATGTCTTC	NA	False	NA	NA	False	NA	NA	NA	156546412	156506114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156545735
tx.9410	chr18	-	2846	2	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTCTTAATAAATTTTC	NA	False	NA	NA	False	NA	NA	NA	10276079	10272219	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_-_10274701_10275714
tx.9413	chr18	-	4394	10	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	-38	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	42.0954236391324	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTCACTAGCTTGCAAT	NA	False	NA	NA	False	NA	NA	NA	10610390	10566507	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_10567647_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
tx.9414	chr18	-	4426	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	46	73	46	22	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTACCCTTTCAGGGA	0	True	NA	NA	False	NA	NA	NA	10610306	10566579	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
tx.9415	chr18	+	635	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	14	209	-7	66	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATAGTGTGTTCAGT	-18	True	NA	NA	False	NA	NA	NA	10617788	10628021	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
tx.9416	chr18	+	558	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	8	-127	8	127	multi-exon	FALSE	canonical	3	110	junction_2	847.378047600689	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGATTTCTTTGAGTCC	-3	True	NA	NA	False	NA	NA	NA	10617803	10628082	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
tx.9417	chr18	-	1927	9	FSM	ENSMUSG00000002475.17	ENSMUST00000117828.9	1962	9	35	0	-23	0	multi-exon	FALSE	canonical	2	2	junction_1	3.63145976158349	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTTTGTGAGTTTT	-2	True	NA	NA	False	NA	NA	NA	10706736	10644410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_10645236_10647725_10647892_10647969_10648019_10652187_10652362_10658779_10658893_10682068_10682115_10704547_10704731_10706000_10706165_10706529
tx.9418	chr18	+	9380	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	11	840	11	110	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGGTGTAATATGTT	11	True	NA	NA	False	NA	NA	NA	10725558	10817738	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
tx.9419	chr18	+	3206	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	6	8	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_8	47.134428192009	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGGATGTGTTACTT	3251	False	NA	NA	False	NA	NA	NA	11790445	11875943	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851940_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
tx.942	chr1	-	4437	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	3	-26	3	-13	multi-exon	FALSE	canonical	3	86	junction_7	39.1298205610869	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTATAATGTCTTC	NA	False	NA	NA	False	NA	NA	NA	156546653	156506114	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
tx.9420	chr18	+	3374	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-48	-117	-2	117	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACGGCTGTTGTAGTCT	3243	False	NA	NA	False	NA	NA	NA	11790437	11876052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
tx.9421	chr18	+	3769	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	8	12	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	51.6930637465625	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATGTGTTACTTTTTT	3279	False	NA	NA	False	NA	NA	NA	11790473	11875947	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_11791286_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
tx.9422	chr18	+	3155	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	239	2	185	-2	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATGTGTGTGTGAACA	NA	False	NA	NA	False	NA	NA	NA	11972515	12078681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
tx.9423	chr18	+	3033	9	FSM	ENSMUSG00000040957.16	ENSMUST00000046948.10	3202	9	229	-60	229	-2	multi-exon	FALSE	canonical	3	8	junction_3	10.1357967126418	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATGTGTGTGTGAACA	NA	False	NA	NA	False	NA	NA	NA	11972559	12078681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
tx.9424	chr18	-	4357	15	FSM	ENSMUSG00000049411.16	ENSMUST00000209859.2	1426	15	9	-2940	-7	1342	multi-exon	TRUE	canonical	3	13	junction_4	4.03871569806491	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCTTTTTTAAGAC	NA	False	NA	NA	False	NA	NA	NA	12254578	12113192	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
tx.9426	chr18	-	2114	7	ISM	ENSMUSG00000049411.16	ENSMUST00000050228.15	2802	13	54254	457	7417	3	3prime_fragment	FALSE	canonical	3	13	junction_4	3.77123616632825	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATGTTTATAAGCATG	NA	False	NA	NA	False	NA	NA	NA	12200271	12114991	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116
tx.9427	chr18	-	2520	14	NIC	ENSMUSG00000049411.16	novel	1426	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	6.86557314974913	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATGTTTATAAGC	NA	False	NA	NA	False	NA	NA	NA	12254590	12114994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12254437
tx.9428	chr18	+	3085	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	16	689	2	-3	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	527	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGGTTCATTGTGTGGT	5521	False	NA	NA	False	NA	NA	NA	12261813	12289755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
tx.9429	chr18	+	2951	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	114.557142260861	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGGTTCATTGTGTGG	5526	False	NA	NA	False	NA	NA	NA	12261818	12289754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
tx.943	chr1	-	6785	18	NIC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_12	65.4046758748759	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGTGGGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	156767160	156631735	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
tx.9430	chr18	+	2016	20	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	69.772721653814	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATAAAGTACCTACAAC	NA	False	NA	NA	False	NA	NA	NA	12301780	12323031	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322340_12322443_12322862
tx.9431	chr18	+	2159	20	FSM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	9	2	9	-2	multi-exon	FALSE	canonical	3	252	junction_9	24.4724957266604	287	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAATGTTGCTAACTC	NA	False	NA	NA	False	NA	NA	NA	12301782	12323052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
tx.9432	chr18	+	2080	19	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	65.1417258325602	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAATGTTGCTAACTC	NA	False	NA	NA	False	NA	NA	NA	12301784	12323052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_12301960_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
tx.9433	chr18	-	4104	18	ISM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	24546	0	700	0	3prime_fragment	FALSE	canonical	3	21	junction_11	8.83176086632785	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGTCTTTTATTGCA	NA	False	NA	NA	False	NA	NA	NA	12344911	12322749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542
tx.9434	chr18	-	5202	25	FSM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	22	0	-20	0	multi-exon	FALSE	canonical	3	21	junction_11	10.5137971521024	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGTCTTTTATTGCA	NA	False	NA	NA	False	NA	NA	NA	12369435	12322749	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
tx.9435	chr18	+	5689	38	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1366	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	19.91739698612	53	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	NA	False	NA	NA	False	NA	NA	NA	12635889	12716070	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
tx.9436	chr18	+	6760	38	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	-48	1158	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	20.7911806329277	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGATAAAAAAAAATCCTCA	NA	False	NA	NA	False	NA	NA	NA	12637207	12717228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
tx.9437	chr18	+	4869	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19798	3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	46	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTTTTATAAGCAAGGA	5000	False	NA	NA	False	NA	NA	NA	12657053	12716073	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
tx.9438	chr18	+	4939	31	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	20112	2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_10	12.4134335835551	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTTTTATAAGCAAGG	5314	False	NA	NA	False	NA	NA	NA	12657367	12716072	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
tx.9439	chr18	+	2578	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	-4	1811	-4	2	multi-exon	FALSE	canonical	3	26	junction_4	8.52563138615225	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGACCTTGCAGGAGC	NA	False	NA	NA	False	NA	NA	NA	12776396	12870109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
tx.944	chr1	-	2927	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-46	1356	4	0	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTTGTATGACTTCA	NA	False	NA	NA	False	NA	NA	NA	156767159	156635685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
tx.9440	chr18	+	2580	14	NIC	ENSMUSG00000024424.16	novel	4385	14	NA	NA	-34	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	13.1886628739371	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGACCTTGCAGGAGC	NA	False	NA	NA	False	NA	NA	NA	12776366	12870109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828620_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
tx.9441	chr18	-	3473	13	FSM	ENSMUSG00000044252.19	ENSMUST00000118313.8	2893	13	-580	0	-2	0	multi-exon	FALSE	canonical	3	43	junction_12	94.3352473304061	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	NA	False	NA	NA	NA	12996350	12888384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
tx.9442	chr18	-	3003	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	13	14	13	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	NA	False	NA	NA	NA	12995717	12888384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
tx.9443	chr18	-	2761	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	57	0	-3	0	multi-exon	TRUE	canonical	3	45	junction_13	91.3749671156418	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	NA	False	NA	NA	NA	12996440	12888384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
tx.9444	chr18	-	2478	14	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	33	junction_13	94.3034884243106	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGTGAATGCTTTC	NA	False	NA	NA	False	NA	NA	NA	12996440	12888390	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
tx.9445	chr18	-	3935	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	7	14	7	0	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	NA	False	NA	NA	NA	13074891	12888384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
tx.9446	chr18	+	3436	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	327	0	-22	0	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	1077	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	NA	False	NA	NA	NA	13105306	13126007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
tx.9447	chr18	-	4899	8	FSM	ENSMUSG00000024420.10	ENSMUST00000025288.9	6206	8	104	1203	-35	0	multi-exon	FALSE	canonical	0	0	junction_3	3.11022015101103	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGAGTGTATTTGTGT	NA	False	NA	NA	False	NA	NA	NA	14105740	13821272	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_13822082_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14104420_14104462_14105557
tx.9448	chr18	-	2952	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	140	6	4	0	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	14815831	14758685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
tx.9449	chr18	-	2859	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	54	-2	4	0	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	955	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	14815831	14758685	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
tx.945	chr1	-	4378	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	11	9	5	-9	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAAGCAGACCGACTGG	NA	False	NA	NA	False	NA	NA	NA	156767158	156634338	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
tx.9450	chr18	+	1682	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	11	-1	11	1	multi-exon	TRUE	canonical	3	86	junction_2	7.18795288428261	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGTGTCTCCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	14839218	14895356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
tx.9451	chr18	+	4446	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	-28	716	-28	-716	multi-exon	FALSE	canonical	3	88	junction_13	8.14912039825809	247	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACTGTCTTTGCAGCAG	NA	False	NA	NA	False	NA	NA	NA	14916273	15032700	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
tx.9452	chr18	-	3392	5	FSM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	37	-652	37	-63	multi-exon	FALSE	canonical	2	9	junction_4	2.1650635094611	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATCTGTGTAGAACACA	NA	False	NA	NA	False	NA	NA	NA	15196638	15101804	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15194824
tx.9453	chr18	-	4134	16	FSM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	709	0	-75	0	multi-exon	FALSE	canonical	2	10	junction_5	4.09009644004746	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	NA	False	NA	NA	False	NA	NA	NA	16941594	16721933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
tx.9454	chr18	-	4321	16	FSM	ENSMUSG00000024331.12	ENSMUST00000075214.9	4508	16	185	2	185	-2	multi-exon	FALSE	canonical	2	8	junction_1	3.07245829914744	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTGTGCAGGTGGTGAAG	NA	False	NA	NA	False	NA	NA	NA	20192350	20163691	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_20165461_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
tx.9455	chr18	-	4449	17	FSM	ENSMUSG00000024331.12	ENSMUST00000039247.11	4630	17	180	1	104	-1	multi-exon	FALSE	canonical	2	2	junction_1	4.14907745770069	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTGCAGGTGGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	20192431	20163690	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
tx.9456	chr18	+	5731	16	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	-16	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	43.6	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTCCATGTCTTCCTA	NA	False	NA	NA	False	NA	NA	NA	20691114	20737583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20736600_20736655
tx.9457	chr18	+	5784	15	FSM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	-13	-5	-13	5	multi-exon	FALSE	canonical	3	147	junction_4	15.0483913303932	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTCCATGTCTTCCTA	NA	False	NA	NA	False	NA	NA	NA	20691117	20737583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
tx.9458	chr18	-	5749	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	51	8	51	-8	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	584	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTGTGTGGTGATG	NA	False	NA	NA	False	NA	NA	NA	20879410	20817663	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
tx.9459	chr18	-	5415	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	60	-523	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	125.675066032297	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACTAAAATTCCTATC	NA	False	NA	NA	False	NA	NA	NA	20879401	20818178	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20872050_20872241_20878409
tx.946	chr1	-	3027	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-60	-20	2	20	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATGTACCAGAACATTG	NA	False	NA	NA	False	NA	NA	NA	156767161	156635665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
tx.9460	chr18	-	5695	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	57	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	102.653467428042	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTGGTGATGTCAT	NA	False	NA	NA	False	NA	NA	NA	20879404	20817659	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825585_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
tx.9461	chr18	-	5489	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-300	-2	at_least_one_novel_splicesite	TRUE	canonical	3	164	junction_9	17.2092464467595	279	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCACTAGCCTAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	21029450	20950281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
tx.9462	chr18	-	5468	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-321	-2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_23	35.6899917372375	50	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCACTAGCCTAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	21029471	20950281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
tx.9463	chr18	+	4877	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	-36	-3493	-36	3493	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGTGTCTATTTGG	5305	False	NA	NA	False	NA	NA	NA	21077645	21120412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
tx.9464	chr18	+	5068	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	-31	-3631	-31	3493	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGTGTCTATTTGG	1188	False	NA	NA	False	NA	NA	NA	21094497	21120412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
tx.9465	chr18	+	3070	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	-73	5	-73	-5	multi-exon	FALSE	canonical	3	116	junction_1	148.868416917611	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTACTTGTGTGTCTTAA	NA	False	NA	NA	False	NA	NA	NA	21134324	21161275	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
tx.9466	chr18	+	2560	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	-62	-76	-62	76	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATCTTAATGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	21134335	21160668	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
tx.9467	chr18	+	2205	6	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_3	152.012367917877	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGTAAAAAACCTTTTT	NA	False	NA	NA	False	NA	NA	NA	21134974	21160593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21157465_21157574_21159142
tx.9468	chr18	+	2807	5	FSM	ENSMUSG00000024317.16	ENSMUST00000234545.2	1769	5	-199	-839	-12	0	multi-exon	FALSE	canonical	3	50	junction_3	174.891930917353	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	21134952	21161281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21159142
tx.9469	chr18	+	2857	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-90	2	-7	-1	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTGTGTCTTAATTAA	NA	False	NA	NA	False	NA	NA	NA	21134957	21161279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
tx.947	chr1	-	7052	21	NIC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	4	-8	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	84.0799619409999	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTATAGATTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	156767159	156631743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
tx.9470	chr18	+	2952	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	4	-685	4	-3	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTGTGTGTCTTAATT	NA	False	NA	NA	False	NA	NA	NA	21134968	21161277	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
tx.9471	chr18	+	2694	17	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-276	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_6	16.5481069536669	33	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGATCTTTCTCCC	NA	False	NA	NA	False	NA	NA	NA	21194703	21233256	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
tx.9472	chr18	-	3653	6	FSM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	-16	1286	-16	0	multi-exon	FALSE	canonical	1	3	junction_2	4.12795348811006	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	21433211	21261543	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_21263080_21264389_21264557_21280788_21281962_21301792_21301924_21369057_21369199_21432706
tx.9473	chr18	+	6173	20	NIC	ENSMUSG00000024302.17	novel	3860	25	NA	NA	679	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	3.4472679776448	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTAGTGGGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	23630570	23792771	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_23630761_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23786385_23786435_23788869
tx.9474	chr18	+	2543	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	-5	1488	-5	5	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAAATTTCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	23937035	24025426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
tx.9475	chr18	+	5847	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-42	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	35.3647658929996	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	24087706	24097728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_24088241_24089395_24089911_24090111_24090254_24093072
tx.9476	chr18	+	5500	4	FSM	ENSMUSG00000024276.8	ENSMUST00000060762.6	5472	4	-30	2	-17	-2	multi-exon	FALSE	canonical	3	23	junction_1	32.0659043568433	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	24087731	24097728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_24087919_24089395_24089911_24090111_24090254_24093072
tx.9477	chr18	+	5661	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24.0554914035583	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	24087732	24097728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_24088081_24089395_24089911_24090111_24090254_24093072
tx.9478	chr18	+	5527	4	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	31.5946549628608	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	24087733	24097728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_24087948_24089395_24089911_24090111_24090254_24093072
tx.9479	chr18	+	2367	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	27	646	27	-646	multi-exon	FALSE	canonical	3	128	junction_1	18.5	179	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTCTTGCATCGTT	1086	False	NA	NA	False	NA	NA	NA	24122715	24137787	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_24122789_24123234_24123448_24135706
tx.948	chr1	-	1732	12	ISM	ENSMUSG00000026594.15	ENSMUST00000190648.7	2498	15	5	9607	5	14	5prime_fragment	FALSE	canonical	3	193	junction_3	27.825311029426	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAGAAAAGAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	156767158	156656053	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
tx.9480	chr18	-	3150	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	18	2564	18	1659	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGGAATTGCCTTACTT	NA	False	NA	NA	False	NA	NA	NA	24153849	24145322	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
tx.9481	chr18	-	3038	3	ISM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	2181	-1657	2181	1657	3prime_fragment	FALSE	canonical	3	225	junction_2	16.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	NA	NA	NA	24151196	24145324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_24147743_24150340_24150489_24150724
tx.9482	chr18	-	3207	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-37	-1657	13	1657	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	NA	NA	NA	24153414	24145324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
tx.9483	chr18	-	3573	4	NIC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	-17	1657	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	NA	NA	NA	24153394	24145324	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
tx.9484	chr18	-	2397	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	98	3	-20	-3	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	719	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGGGGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	24254912	24237816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
tx.9485	chr18	+	4032	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	-60	5	-60	3	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGATACTCTGAGTAG	NA	False	NA	NA	False	NA	NA	NA	24338340	24419870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
tx.9486	chr18	+	4132	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-20	-4	-20	-4	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	832	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	NA	False	NA	NA	NA	24338803	24419871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
tx.9487	chr18	+	4309	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	74	-4	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	NA	False	NA	NA	NA	24338897	24419871	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
tx.9488	chr18	+	4120	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	61	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	217.600007613992	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATACTCTGAGTAGTTG	NA	False	NA	NA	False	NA	NA	NA	24338884	24419873	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_24339138_24365655_24365711_24370537_24370605_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
tx.9489	chr18	+	1083	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-27	9	-8	-9	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGTACCGAATGGTAG	332	False	NA	NA	False	NA	NA	NA	24603898	24610846	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
tx.949	chr1	-	5165	18	FSM	ENSMUSG00000070565.12	ENSMUST00000078308.13	10047	18	-3	4885	-3	467	multi-exon	FALSE	canonical	0	0	junction_6	3.97135068932194	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAAAACTAGACTAGGAA	4363	False	NA	NA	False	NA	NA	NA	157240168	156967636	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986429_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
tx.9490	chr18	+	1041	4	NIC	ENSMUSG00000024273.9	novel	1146	5	NA	NA	0	-16	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	89.4886709154976	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTATAATGTGTACCGA	344	False	NA	NA	False	NA	NA	NA	24603910	24610839	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_24604038_24606006_24606207_24608581_24608782_24610325
tx.9491	chr18	-	4026	8	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	90.8764579648926	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	24663280	24618017	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_24620902_24621192_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
tx.9492	chr18	-	4308	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	268	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	24663270	24618016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
tx.9493	chr18	-	3104	5	FSM	ENSMUSG00000040446.5	ENSMUST00000234403.2	2950	5	-155	1	-9	-1	multi-exon	FALSE	canonical	3	215	junction_1	46.5886252211846	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTCTCATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	24663270	24638484	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_24640067_24640161_24641149_24641226_24641334_24642849_24642980_24662972
tx.9494	chr18	-	2344	6	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-9	20466	-9	1	5prime_fragment	FALSE	canonical	3	215	junction_1	43.046951111548	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTCATGTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	24663270	24638482	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
tx.9495	chr18	-	3893	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	-11	0	-11	0	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTCTCTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	24736885	24712937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
tx.9496	chr18	+	2767	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	2	697	0	0	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	926	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	24737019	24771867	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
tx.9497	chr18	+	2759	15	FSM	ENSMUSG00000039616.11	ENSMUST00000068006.9	2903	15	144	0	-43	0	multi-exon	FALSE	canonical	2	8	junction_8	5.18878303533257	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCCTGCCATTATTGAG	NA	False	NA	NA	False	NA	NA	NA	24786891	24834632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_24787125_24793046_24793137_24797073_24797141_24799066_24799709_24803621_24803699_24807287_24807488_24809616_24809734_24812442_24812869_24816185_24816349_24819683_24819763_24821994_24822120_24825574_24825681_24828930_24829070_24832909_24833015_24834442
tx.9498	chr18	+	4951	25	FSM	ENSMUSG00000034295.11	ENSMUST00000234834.2	4956	25	5	0	5	0	multi-exon	TRUE	canonical	3	28	junction_12	8.53414302799187	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	24842506	25266558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
tx.9499	chr18	+	4842	24	NIC	ENSMUSG00000034295.11	novel	4956	25	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	12.8794028205205	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	24842510	25266558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
tx.95	chr1	-	2351	10	FSM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	-64	2	-64	-2	multi-exon	FALSE	canonical	3	380	junction_6	35.0269737329517	540	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTTATTTGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	23961462	23884707	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
tx.950	chr1	-	9983	18	FSM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	-635	-5335	26	-17	multi-exon	FALSE	canonical	1	2	junction_9	3.69512912342104	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTTCAGACTAAGAGT	4392	False	NA	NA	False	NA	NA	NA	157240139	156962768	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986408_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
tx.9500	chr18	-	2547	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	131	1481	131	-1481	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAAAATGTTTAACTT	NA	False	NA	NA	False	NA	NA	NA	25301933	25270574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
tx.9501	chr18	+	2073	5	ISM	ENSMUSG00000033632.17	ENSMUST00000162149.2	1427	6	-6	85322	0	16353	5prime_fragment	FALSE	canonical	3	40	junction_3	4.32290411644765	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGCTTTATGTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	25302070	25338643	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917
tx.9502	chr18	+	5361	11	FSM	ENSMUSG00000033632.17	ENSMUST00000097643.10	5351	11	-11	1	-1	-1	multi-exon	FALSE	canonical	3	22	junction_9	9.53100204595508	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAGTGTAATAATTTTT	NA	False	NA	NA	False	NA	NA	NA	25302065	25600377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
tx.9503	chr18	-	3196	10	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248913	-1456	-3831	10	3prime_fragment	FALSE	canonical	2	4	junction_2	10.3064165558269	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAACCTCAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	25638127	25610678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
tx.9504	chr18	-	2319	2	ISM	ENSMUSG00000024268.17	ENSMUST00000115816.3	3995	13	266961	-10	-125	10	3prime_fragment	FALSE	canonical	3	39	junction_1	0	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAACCTCAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	25620079	25610678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_25612769_25619850
tx.9505	chr18	-	3257	10	ISM	ENSMUSG00000024268.17	ENSMUST00000115816.3	3995	13	248912	-10	-3832	10	3prime_fragment	FALSE	canonical	3	7	junction_2	9.7410927974683	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAACCTCAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	25638128	25610678	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_25612769_25619850_25620023_25624137_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
tx.9506	chr18	+	3128	25	FSM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	123	6	0	0	multi-exon	FALSE	canonical	3	114	junction_11	21.8495089571063	233	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATGCCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	30405922	30481173	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
tx.9507	chr18	-	3375	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-2	998	-2	-998	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAACTGCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	31742957	31714218	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
tx.9508	chr18	-	2859	7	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	2	-1409	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	63.5883025581138	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATCTCTTAACGTGT	NA	False	NA	NA	False	NA	NA	NA	31742953	31714629	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_31716823_31727629_31727688_31730091_31730149_31735775_31735854_31738805_31738864_31740274_31740318_31742581
tx.9509	chr18	+	4045	21	FSM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	-28	-2	-16	2	multi-exon	FALSE	canonical	3	84	junction_13	29.4439722184355	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	6789	False	NA	NA	False	NA	NA	NA	31767407	31856116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
tx.951	chr1	+	813	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	380	1	92	-1	multi-exon	FALSE	canonical	3	989	junction_1	26.5	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGGCCCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	157240301	157247805	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_157240696_157241313_157241366_157247438
tx.9510	chr18	+	4052	21	FSM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	-20	-2	-20	2	multi-exon	FALSE	canonical	3	64	junction_13	32.249767441022	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	6785	False	NA	NA	False	NA	NA	NA	31767403	31856116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
tx.9511	chr18	+	3975	21	NIC	ENSMUSG00000024260.15	novel	400	3	NA	NA	-15	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	43.0866568672948	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	7504	False	NA	NA	False	NA	NA	NA	31768122	31856116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_31768185_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
tx.9512	chr18	+	3977	21	NIC	ENSMUSG00000024260.15	novel	400	3	NA	NA	-20	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	41.2439086411557	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	7499	False	NA	NA	False	NA	NA	NA	31768117	31856116	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_31768185_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
tx.9513	chr18	+	4772	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	-52	-1335	2	1335	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTCTGCCTCTGTGTG	6869	False	NA	NA	False	NA	NA	NA	31892880	31917131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
tx.9514	chr18	+	4647	7	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	11	1330	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	37.8832270126093	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGTCTTCTGCCTCT	6878	False	NA	NA	False	NA	NA	NA	31892889	31917126	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_31893248_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
tx.9515	chr18	+	1039	4	FSM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	694	junction_1	16.2138486760204	364	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	31922187	31929754	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_31922298_31924892_31925074_31928340_31928437_31929102
tx.9516	chr18	+	4576	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-8	7	0	-7	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	300	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTAACAGCAGCACCCAC	5647	False	NA	NA	False	NA	NA	NA	31937142	32040443	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
tx.9517	chr18	+	1600	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-86	902	0	-902	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGTGCCATCTATGT	5647	False	NA	NA	False	NA	NA	NA	31937142	31967573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
tx.9518	chr18	+	2521	7	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	84150	25	6106	-25	3prime_fragment	FALSE	canonical	3	203	junction_2	27.4469184669852	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAATGTGATTTACTGA	NA	False	NA	NA	False	NA	NA	NA	32021300	32040425	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
tx.9519	chr18	+	2793	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	12	6808	12	1	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTCTCATCATTGTC	NA	False	NA	NA	False	NA	NA	NA	32200805	32230573	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
tx.952	chr1	+	1626	10	FSM	ENSMUSG00000033488.12	ENSMUST00000046743.11	1618	10	-6	-2	-3	2	multi-exon	FALSE	canonical	3	36	junction_7	9.08125188520113	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	157286143	157316632	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
tx.9520	chr18	+	5402	12	ISM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	12164	3562	-3361	2315	3prime_fragment	FALSE	canonical	3	171	junction_1	17.4308551351849	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATTTATTCACTCCA	NA	False	NA	NA	False	NA	NA	NA	32212957	32233819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
tx.9521	chr18	+	5045	2	NNC	ENSMUSG00000024384.5	novel	9613	14	NA	NA	10932	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACACTAATGCTGGT	NA	False	NA	57	True	NA	NA	NA	32232245	32237377	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_32236867_32236953
tx.9522	chr18	+	10860	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	-185	9	-78	-9	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTGATTTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	32296063	32369795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
tx.9523	chr18	+	1928	13	FSM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	-39	-3	-24	-1	multi-exon	FALSE	canonical	3	6	junction_10	7.81024967590665	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGAGGCGTGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	32510258	32568789	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
tx.9524	chr18	+	2198	15	FSM	ENSMUSG00000024381.17	ENSMUST00000091967.13	2091	15	-106	-1	-91	1	multi-exon	FALSE	canonical	3	7	junction_10	7.8846919627173	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCGTGTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	32510191	32568791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
tx.9525	chr18	+	2004	14	NIC	ENSMUSG00000024381.17	novel	2091	15	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	8.76518125122715	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCGTGTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	32510313	32568791	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32565035_32565147_32565376_32565479_32568187
tx.9526	chr18	+	3168	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	43	1244	15	-50	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	845	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTATCTGTAATATACTTA	9007	False	NA	NA	False	NA	NA	NA	32970320	32999403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
tx.9527	chr18	-	5138	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	24	-65	-17	65	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGGTCATTGACCTTG	NA	False	NA	NA	False	NA	NA	NA	33346891	33332342	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
tx.9528	chr18	-	2207	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	-22	0	-22	0	multi-exon	FALSE	canonical	3	35	junction_4	6.79613860953409	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTGGCTCATTATT	NA	False	NA	NA	False	NA	NA	NA	33597104	33570071	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
tx.9529	chr18	+	434	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	-1	-3	-1	3	multi-exon	FALSE	canonical	3	377	junction_1	24	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTATGTTGTGTGATT	NA	False	NA	NA	False	NA	NA	NA	33927943	33929042	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_33928178_33928435_33928499_33928905
tx.953	chr1	+	3037	20	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	337	combination_of_known_junctions	FALSE	canonical	3	166	junction_4	54.1975457121338	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAAATGTACTGGTGA	NA	False	NA	NA	False	NA	NA	NA	159059759	159173007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
tx.9530	chr18	-	3672	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-81	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_19	47.5448251335035	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGTCTGGTCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	34140100	33929382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
tx.9531	chr18	-	3561	23	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	348	3	348	-3	3prime_fragment	FALSE	canonical	3	125	junction_9	28.0317116763164	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGTCTGGTCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	34139624	33929382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
tx.9532	chr18	-	3868	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-305	3	-258	-3	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGTCTGGTCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	34140277	33929382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
tx.9533	chr18	-	3529	3	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-481	-83769	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	38.5	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGAGATTTTGTGATG	NA	False	NA	NA	False	NA	NA	NA	34140500	34135615	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_34138028_34139037_34139476_34139821
tx.9534	chr18	+	9961	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-14	-2615	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_11	14.6799182559032	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCTAAAATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	34353962	34452627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
tx.9535	chr18	+	9896	16	FSM	ENSMUSG00000005871.16	ENSMUST00000079362.13	12811	16	-71	2986	-11	-2623	multi-exon	FALSE	canonical	3	36	junction_11	20.0838243370131	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTAACCATTCCTAAAA	NA	False	NA	NA	False	NA	NA	NA	34353965	34452619	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
tx.9536	chr18	+	9651	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-23	-2631	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	21.8974884404582	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTGACACTTAACCAT	NA	False	NA	NA	False	NA	NA	NA	34353953	34452611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431778_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
tx.9537	chr18	+	9833	16	NNC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	-7	-2631	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	24.5586825560511	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTGACACTTAACCAT	NA	False	NA	NA	False	NA	NA	NA	34353969	34452611	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
tx.9538	chr18	+	873	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	1	2	1	-2	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	256	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTAGTAGCTTTCACTT	NA	False	NA	NA	False	NA	NA	NA	34464198	34469650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
tx.9539	chr18	+	551	2	ISM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	3373	1	3342	-1	3prime_fragment	FALSE	canonical	3	2090	junction_1	0	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAGTAGCTTTCACTTA	NA	False	NA	NA	False	NA	NA	NA	34467570	34469651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_34467622_34469151
tx.954	chr1	+	3059	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-137	2194	-131	346	multi-exon	FALSE	canonical	3	188	junction_4	50.8633495988022	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	NA	NA	NA	159059758	159173016	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
tx.9540	chr18	-	2876	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTAAAATGTTGTTTT	5537	False	NA	NA	False	NA	NA	NA	34506446	34477937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
tx.9541	chr18	-	5143	21	FSM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	-19	-1780	-11	1780	multi-exon	FALSE	canonical	2	10	junction_18	10.452152888281	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	NA	False	NA	NA	False	NA	NA	NA	34639895	34573623	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
tx.9542	chr18	-	3241	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	16	1211	16	4	multi-exon	FALSE	canonical	3	307	junction_21	99.9950565671548	475	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	34757638	34732878	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
tx.9543	chr18	+	2973	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	229	472	-43	0	multi-exon	TRUE	canonical	3	938	junction_13	99.0044268869321	2131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6206	False	NA	NA	False	NA	NA	NA	34758016	34765858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
tx.9544	chr18	-	2075	17	FSM	ENSMUSG00000024370.18	ENSMUST00000025228.12	2084	17	12	-3	-1	3	multi-exon	FALSE	canonical	3	73	junction_1	259.182247655969	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTGTTCTTTCTAGAG	NA	False	NA	NA	False	NA	NA	NA	34784776	34764000	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
tx.9545	chr18	-	3021	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	12	1100	-1	895	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	1839	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATATAATATTTGTGCA	NA	False	NA	NA	False	NA	NA	NA	34784776	34765835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
tx.9546	chr18	-	1958	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	-13	0	-13	0	multi-exon	FALSE	canonical	3	155	junction_14	20.2922524674833	165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2779	False	NA	NA	False	NA	NA	NA	34884599	34866045	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
tx.9547	chr18	+	4281	5	FSM	ENSMUSG00000034300.18	ENSMUST00000097622.4	4256	5	-3	-22	-3	0	multi-exon	FALSE	canonical	3	31	junction_2	5.02493781056044	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	5084	False	NA	NA	False	NA	NA	NA	34892605	34906813	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_34892651_34895547_34895778_34896125_34896184_34901220_34902006_34903650
tx.9548	chr18	+	6720	24	FSM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	-22	-335	-22	335	multi-exon	FALSE	canonical	3	208	junction_7	44.6966672190611	232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	34910077	34972048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
tx.9549	chr18	+	6118	23	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-20	335	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	70.7726104979477	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	34910079	34972048	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
tx.955	chr1	+	3132	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	336	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	106.317637295041	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAAAATGTACTGGTG	NA	False	NA	NA	False	NA	NA	NA	159059759	159173006	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
tx.9550	chr18	+	4888	17	ISM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	31539	-337	-4971	337	3prime_fragment	FALSE	canonical	3	247	junction_4	42.4527310664461	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTGGAGTAGACAAAATT	9338	False	NA	NA	False	NA	NA	NA	34941638	34972050	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
tx.9551	chr18	+	5659	16	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-4976	334	intron_retention	FALSE	canonical	3	247	junction_3	41.8422434070322	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCTTTGGAGTAGACAAA	9333	False	NA	NA	False	NA	NA	NA	34941633	34972047	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
tx.9552	chr18	-	2199	10	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	329	1342	329	-1342	3prime_fragment	FALSE	canonical	3	1038	junction_9	65.5033690585812	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGATGATTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	35064731	35037179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621
tx.9553	chr18	-	2348	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	19	1342	19	-1342	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	1241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGATGATTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	35065041	35037179	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
tx.9554	chr18	-	2822	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	7	220	7	-220	multi-exon	TRUE	canonical	3	5978	junction_5	267.479905787332	9851	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	206	False	NA	NA	False	NA	NA	NA	35087403	35070686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
tx.9555	chr18	+	3689	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	40	4	12	-4	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	3742	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	NA	False	NA	NA	NA	35251951	35387828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
tx.9556	chr18	-	1668	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	35	0	0	0	multi-exon	TRUE	canonical	3	128	junction_3	10.8423039781937	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTCTCTTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	35631947	35399448	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
tx.9557	chr18	+	3840	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	56	2366	-3	50	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	35695266	35724522	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
tx.9558	chr18	+	1450	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	24	1	0	-1	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	1438	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4664	False	NA	NA	False	NA	NA	NA	35731693	35750238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
tx.9559	chr18	-	3178	17	NNC	ENSMUSG00000024354.14	novel	3026	15	NA	NA	-2620	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2.25	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTCAGTTTCTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	35762917	35747660	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_35748741_35752440_35752706_35754819_35754916_35755339_35755484_35755564_35755695_35755911_35756018_35756503_35756652_35757123_35757281_35757480_35757602_35757734_35757917_35758052_35758121_35758240_35758330_35758860_35759019_35759411_35759547_35760154_35760217_35760630_35760694_35762743
tx.956	chr1	+	864	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	33	2102	33	248	multi-exon	FALSE	canonical	3	2655	junction_1	51	404	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTTTCATCTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	160022817	160027638	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_160022882_160024515_160024675_160026997
tx.9560	chr18	-	670	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	30	2	0	-2	multi-exon	TRUE	canonical	3	154	junction_2	20.7980768341691	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTAATGCCCAACCTC	NA	False	NA	NA	False	NA	NA	NA	35795209	35789743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
tx.9561	chr18	-	676	4	FSM	ENSMUSG00000024352.13	ENSMUST00000096573.4	710	4	18	16	-12	-15	multi-exon	FALSE	canonical	3	181	junction_2	13.2748718344933	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTTCTTAGTCCACCTT	NA	False	NA	NA	False	NA	NA	NA	35795221	35793084	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_35793407_35793496_35793628_35793844_35793911_35795064
tx.9562	chr18	-	5248	9	NIC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	22.8250821466211	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGACTTTATGACTCCTCT	NA	False	NA	NA	False	NA	NA	NA	35836182	35804155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835559_35836078
tx.9563	chr18	-	5145	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	0	1	0	-1	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGACTTTATGACTCCTC	NA	False	NA	NA	False	NA	NA	NA	35836174	35804156	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
tx.9564	chr18	-	3556	9	NIC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	-6	-1780	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	26.5329983228432	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGCCCTGTTTGTATG	NA	False	NA	NA	False	NA	NA	NA	35836180	35805935	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835649_35836078
tx.9565	chr18	+	1576	2	FSM	ENSMUSG00000073598.4	ENSMUST00000097617.3	2504	2	-166	1094	-166	5	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTGGTACTGTCTTTT	1176	False	NA	NA	False	NA	NA	NA	35859875	35862828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_35860150_35861526
tx.9566	chr18	-	1868	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	85	346	-7	6	multi-exon	TRUE	canonical	2	5	junction_4	3.35638289270592	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGCCTCTTCCCCTTGT	NA	False	NA	NA	False	NA	NA	NA	35873522	35867079	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
tx.9567	chr18	+	2483	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-10	7	-10	0	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	857	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTTCACCTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	35904600	35940214	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
tx.9568	chr18	+	3785	2	FSM	ENSMUSG00000046668.10	ENSMUST00000237291.2	1169	2	-141	-2475	-36	1	multi-exon	FALSE	canonical	3	389	junction_1	0	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCCTGGCTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	35962804	35994742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_35963293_35991445
tx.9569	chr18	+	2589	3	NIC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	333	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCCTGGCTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	35962807	35994742	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_35963293_35991445_35992510_35993702
tx.957	chr1	-	1511	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	33	554	33	-554	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	2285	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCTGCAATCTGTT	7329	False	NA	NA	False	NA	NA	NA	160040412	160030490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
tx.9570	chr18	+	2185	3	NIC	ENSMUSG00000046668.10	novel	857	2	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	135.5	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTCCTGGCTTCTTGCTC	NA	False	NA	NA	False	NA	NA	NA	35963372	35994743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_35963453_35991445_35992510_35993702
tx.9571	chr18	-	3062	10	FSM	ENSMUSG00000060275.15	ENSMUST00000115713.9	3056	10	9	-15	9	15	multi-exon	FALSE	canonical	0	0	junction_9	2.45452467048606	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATTTTTTGACTCTTTA	NA	False	NA	NA	False	NA	NA	NA	36330424	36150689	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36165388_36165466_36171283_36171405_36178910_36179030_36185832_36186005_36329480
tx.9572	chr18	+	5955	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	-12	14	-12	-14	multi-exon	FALSE	canonical	3	21	junction_1	0	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATCAGTTGTACTCACT	NA	False	NA	NA	False	NA	NA	NA	36414137	36425574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36414603_36420084
tx.9573	chr18	+	4403	2	NNC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5268	-1229	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATATTGATGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	36419417	36424359	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_36419546_36420084
tx.9574	chr18	+	836	3	FSM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	-6	1	-6	-1	multi-exon	FALSE	canonical	3	759	junction_1	90	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTTACTCCAGG	NA	False	NA	NA	False	NA	NA	NA	36481743	36536032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36481870_36499567_36499795_36535549
tx.9575	chr18	+	949	4	FSM	ENSMUSG00000046727.14	ENSMUST00000235864.2	1101	4	32	120	-6	2	multi-exon	FALSE	canonical	3	70	junction_2	406.851597295896	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGTGACTTACTCCA	NA	False	NA	NA	False	NA	NA	NA	36481743	36536030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36481870_36483746_36483862_36499567_36499795_36535549
tx.9576	chr18	-	686	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	15	408	15	121	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	694	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATGTGCTTTTCTCCA	NA	False	NA	NA	False	NA	NA	NA	36587562	36537136	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
tx.9577	chr18	-	2361	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	9	5	9	-5	multi-exon	FALSE	canonical	3	29	junction_4	10.9068785635488	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTTCTGTTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	36648849	36637984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
tx.9578	chr18	-	891	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	525	563	0	2	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	311	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGATGTCAGACTGGT	NA	False	NA	NA	False	NA	NA	NA	36803343	36800296	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
tx.9579	chr18	+	2362	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	7	-7	3	-1	multi-exon	TRUE	canonical	3	118	junction_3	140.362229804017	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	36812638	36816913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
tx.958	chr1	-	8264	27	NIC	ENSMUSG00000026721.17	novel	6338	9	NA	NA	95	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	11.0034959479669	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTCTAATTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	160620413	160046743	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568370_160568453_160568502_160620305
tx.9580	chr18	+	2468	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	-4	-2	-4	-1	multi-exon	FALSE	canonical	3	269	junction_1	96	325	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	36812640	36816913	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36812677_36813568_36813668_36814580
tx.9581	chr18	-	2930	15	NNC	ENSMUSG00000044719.6	novel	2016	13	NA	NA	-155	730	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.17124059336724	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCTCTATCTCTCAA	NA	False	NA	NA	False	NA	NA	NA	36829133	36817245	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_36818622_36818699_36818859_36819741_36819907_36820298_36820370_36821210_36821269_36821937_36822016_36822086_36822296_36824493_36824628_36825266_36825366_36825451_36825539_36826090_36826174_36827736_36827815_36828592_36828713_36828850_36828899_36828968
tx.9582	chr18	+	1811	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	12	0	5	0	multi-exon	FALSE	canonical	3	53	junction_4	9.25845604107201	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGCCTCAGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	36868132	36875450	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
tx.9583	chr18	-	431	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	17	124	17	-124	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	447	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATGTCCTCTTCATTA	NA	False	NA	NA	False	NA	NA	NA	36877593	36875508	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_36875712_36877233_36877341_36877472
tx.9584	chr18	+	1957	20	FSM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	35	4	-1	0	multi-exon	FALSE	non_canonical	0	0	junction_14	168.043095646503	728	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	NA	False	NA	NA	NA	36877743	36890688	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
tx.9585	chr18	+	1595	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	21	3	21	-3	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	209	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTCTGGTGCCAAGCTG	NA	False	NA	NA	False	NA	NA	NA	36893293	36896860	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
tx.9586	chr18	-	1489	4	FSM	ENSMUSG00000044595.11	ENSMUST00000061522.8	1451	4	-35	-3	-19	1	multi-exon	TRUE	canonical	3	43	junction_2	7.76029781788188	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGCTTGGTATACA	NA	False	NA	NA	False	NA	NA	NA	36899286	36896722	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_36897541_36898148_36898611_36898945_36899064_36899195
tx.9587	chr18	-	1951	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	38	0	38	0	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	756	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGTCCTTGATGC	NA	False	NA	NA	False	NA	NA	NA	36916220	36899580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
tx.9588	chr18	+	2412	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	236	688	13	180	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCTGAGTTCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	36916296	36924927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
tx.9589	chr18	+	1268	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	51	991	51	592	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	309	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTTTCTTCTGTTTCAC	6667	False	NA	NA	False	NA	NA	NA	36926979	36931728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
tx.959	chr1	+	5245	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	-6	5767	-6	1394	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTGAGGAAGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	160733981	160796781	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
tx.9590	chr18	+	2139	5	NIC	ENSMUSG00000001383.10	novel	2310	6	NA	NA	52	592	intron_retention	FALSE	canonical	3	554	junction_4	83.184659042398	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTTTCTTCTGTTTCAC	6668	False	NA	NA	False	NA	NA	NA	36926980	36931728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_36927013_36927349_36927444_36928093_36929164_36929551_36929698_36930931
tx.9591	chr18	-	1738	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	33	1531	33	-1531	multi-exon	FALSE	canonical	3	1260	junction_1	0	1258	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	NA	False	NA	NA	NA	37777224	37775074	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_37776586_37776997
tx.9592	chr18	+	2319	4	FSM	ENSMUSG00000102428.2	ENSMUST00000044851.8	5080	4	2761	0	2568	0	multi-exon	FALSE	canonical	3	109	junction_1	53.597263611743	147	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	37901393	37974926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_37901594_37958073_37958133_37966317_37966407_37972955
tx.9593	chr18	+	2317	4	NNC	ENSMUSG00000102918.2	novel	4687	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	99.533355659743	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	37939432	37974926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_37939631_37958073_37958133_37966317_37966407_37972955
tx.9594	chr18	+	4714	4	FSM	ENSMUSG00000102918.2	ENSMUST00000076807.7	4687	4	-30	3	16	-3	multi-exon	FALSE	canonical	3	36	junction_1	87.788888185743	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	37939432	37974923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_37942031_37958073_37958133_37966317_37966407_37972955
tx.9595	chr18	+	4684	4	FSM	ENSMUSG00000023036.15	ENSMUST00000066140.13	5024	4	340	0	18	0	multi-exon	FALSE	canonical	1	1	junction_1	104.233711757121	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	37948471	37974926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_37951037_37958073_37958133_37966317_37966407_37972955
tx.9596	chr18	+	2177	3	FSM	ENSMUSG00000102543.6	ENSMUST00000192875.2	5777	3	5306	-1706	5306	-3	multi-exon	FALSE	canonical	3	212	junction_1	9.5	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	2323	False	NA	NA	False	NA	NA	NA	37958012	37974923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_37958133_37966317_37966407_37972955
tx.9597	chr18	-	2778	7	NNC	ENSMUSG00000024456.17	novel	5666	27	NA	NA	195	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	34.1211078366456	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTAGCCTCCTTTG	9740	False	NA	NA	False	NA	NA	NA	37989002	37976653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765
tx.9598	chr18	-	3947	9	NNC	ENSMUSG00000024456.17	novel	5666	27	NA	NA	-1372	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.1662062579967	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTAGCCTCCTTTG	8959	False	NA	NA	False	NA	NA	NA	37990569	37976653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505
tx.9599	chr18	-	3536	12	NNC	ENSMUSG00000024456.17	novel	5666	27	NA	NA	7122	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.2981973756897	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTAGCCTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	38023873	37976653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993567_38022750_38022866_38023529
tx.96	chr1	-	653	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	25	5	-1	-5	multi-exon	FALSE	canonical	3	315	junction_1	0.5	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGATTTATTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	24044712	24035024	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_24035442_24042237_24042388_24044626
tx.960	chr1	+	3003	3	NIC	ENSMUSG00000053332.14	novel	2556	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	4541	junction_2	514	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	NA	False	NA	NA	NA	160862735	160866109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_160865608_160865794_160865843_160866026
tx.9600	chr18	-	5639	27	NNC	ENSMUSG00000024456.17	novel	5741	29	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.3577930845813	52	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTAGCCTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	38068484	37976653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993567_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
tx.9601	chr18	-	1994	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	33	5	-9	-5	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	711	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTACTTTATTAGTTAGG	NA	False	NA	NA	False	NA	NA	NA	38088036	38070029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
tx.9602	chr18	-	2372	14	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	500	junction_2	40.7767772406081	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTACTTTATTAGTTAG	NA	False	NA	NA	False	NA	NA	NA	38088038	38070030	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
tx.9603	chr18	-	4264	20	FSM	ENSMUSG00000038524.14	ENSMUST00000043437.14	4270	20	6	0	1	0	multi-exon	FALSE	canonical	2	8	junction_13	2.48875587737619	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTCATGTGTTCGTC	NA	False	NA	NA	False	NA	NA	NA	38102821	38090486	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
tx.9604	chr18	+	2391	13	FSM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	0	3	0	-3	multi-exon	FALSE	canonical	3	315	junction_6	27.9179104200551	536	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCTTGCCCTTGAGT	3967	False	NA	NA	False	NA	NA	NA	38383311	38395679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
tx.9605	chr18	+	2844	8	FSM	ENSMUSG00000060450.15	ENSMUST00000236649.2	2822	8	-20	-2	-4	2	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	965	False	NA	NA	False	NA	NA	NA	38429726	38450897	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
tx.9606	chr18	+	3001	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	39	0	-4	0	multi-exon	FALSE	canonical	3	120	junction_3	53.7248487666555	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	965	False	NA	NA	False	NA	NA	NA	38429726	38450902	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
tx.9607	chr18	-	2266	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	31	-8	4	0	multi-exon	FALSE	canonical	3	1055	junction_1	137.188434886716	1337	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTGAATTTTG	NA	False	NA	NA	False	NA	NA	NA	38472025	38460602	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
tx.9608	chr18	+	1758	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	31	7	-4	-7	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTAGATTAGTGTTTCA	9098	False	NA	NA	False	NA	NA	NA	38551990	38598243	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
tx.9609	chr18	+	1772	8	FSM	ENSMUSG00000024425.5	ENSMUST00000025293.5	1392	8	-34	-346	-7	-12	multi-exon	FALSE	canonical	3	22	junction_7	234.910230357323	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTACTGTAGATTAGTG	9095	False	NA	NA	False	NA	NA	NA	38551987	38598238	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597313
tx.961	chr1	+	460	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	99	-2	0	0	multi-exon	TRUE	canonical	3	3085	junction_7	1053.46856146731	277	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	NA	False	NA	NA	NA	160862735	160866109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
tx.9610	chr1	+	200	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	2	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATTACATGTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	12705426	12705626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr1_+_12705400_12705600
tx.9611	chr18	-	4660	2	FSM	ENSMUSG00000024427.8	ENSMUST00000025295.8	4755	2	77	18	77	-18	multi-exon	FALSE	canonical	2	2	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGCTGCCATTCTCTT	NA	False	NA	NA	False	NA	NA	NA	38734391	38719317	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_38723809_38734222
tx.9612	chr18	+	4014	23	FSM	ENSMUSG00000036452.19	ENSMUST00000155576.8	2280	23	-377	-1357	-46	8	multi-exon	FALSE	canonical	2	6	junction_21	7.92227219263608	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTAAAGTTTTATATTT	NA	False	NA	NA	False	NA	NA	NA	39126151	39505572	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39490605_39490717_39496169_39496262_39504126
tx.9613	chr18	+	2700	21	NIC	ENSMUSG00000036452.19	novel	6415	22	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	6.07124369466422	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGACTTTGAGCGTTTG	NA	False	NA	NA	False	NA	NA	NA	39126172	39440426	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39440070
tx.9614	chr18	-	6317	8	FSM	ENSMUSG00000024431.16	ENSMUST00000115571.8	6327	8	-1	11	-1	-11	multi-exon	FALSE	canonical	3	54	junction_5	7.56738436465659	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACTCCCAACATGTTT	NA	False	NA	NA	False	NA	NA	NA	39620299	39543610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050
tx.9615	chr18	-	6430	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	-7	13	-7	-11	multi-exon	FALSE	canonical	3	29	junction_8	14.4649360523993	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACTCCCAACATGTTT	NA	False	NA	NA	False	NA	NA	NA	39623734	39543610	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
tx.9616	chr18	-	6783	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	-58	-14	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	16.8221394299298	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGTGACTCCCAACATG	NA	False	NA	NA	False	NA	NA	NA	39622999	39543613	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622529
tx.9617	chr18	-	1728	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	67	1533	-19	-1533	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTGAAGTTTACTT	NA	False	NA	NA	False	NA	NA	NA	40352415	40338481	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
tx.9618	chr18	-	5250	8	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	2	11060	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	124.950112493927	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGAGTGAACACTCTTT	NA	False	NA	NA	False	NA	NA	NA	42084280	41997604	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_42001380_42008030_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
tx.9619	chr18	-	846	7	FSM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	21	1	-4	-1	multi-exon	FALSE	canonical	3	300	junction_2	31.5722275988812	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGCTTTCTCCAAATG	NA	False	NA	NA	False	NA	NA	NA	42084286	42008665	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
tx.962	chr1	+	3190	2	FSM	ENSMUSG00000053332.14_ENSMUSG00000064816.3_ENSMUSG00000064440.3_ENSMUSG00000065160.3	ENSMUST00000159037.2	636	2	-2552	-2	0	0	multi-exon	FALSE	canonical	3	4541	junction_1	0	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	NA	False	NA	NA	NA	160862735	160866109	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_160865843_160866026
tx.9620	chr18	-	3859	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	70	51	5	-2	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	2913	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	NA	False	NA	NA	NA	42395189	42335413	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
tx.9621	chr18	+	6256	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	-3	13	-3	2	multi-exon	TRUE	canonical	3	13	junction_8	26.3045239044415	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATCACTAAAAGAGCTGT	NA	False	NA	NA	False	NA	NA	NA	42408414	42474594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
tx.9622	chr18	+	6416	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-16	-99	3	3	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATCACTAAAAGAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	42408420	42474595	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
tx.9623	chr18	+	5683	17	ISM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	23798	34	49	-34	3prime_fragment	FALSE	canonical	3	82	junction_2	15.4226902646717	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTTGACTTTTGCAATA	NA	False	NA	NA	False	NA	NA	NA	42432234	42474462	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
tx.9624	chr18	+	4156	13	ISM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	38689	614	14940	-614	3prime_fragment	FALSE	canonical	3	101	junction_8	9.74964386813978	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGAATATGTGTATGTG	6145	False	NA	NA	False	NA	NA	NA	42447125	42473882	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
tx.9625	chr18	+	4152	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	-1	-50	1	50	multi-exon	FALSE	canonical	3	254	junction_5	111.046881991346	361	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	42644564	42708669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
tx.9626	chr18	+	4212	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	16	189	2	50	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	635	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	42644567	42708669	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
tx.9627	chr18	-	5172	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	234	-3300	234	-4	multi-exon	FALSE	canonical	1	1	junction_3	2.11223541811477	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTTCTCCAGTCGTT	NA	False	NA	NA	False	NA	NA	NA	43526208	43454052	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
tx.9628	chr18	+	8635	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-23	4	2	-4	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTTTGTGGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	44513570	44558032	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
tx.9629	chr18	+	413	2	FSM	ENSMUSG00000024472.10	ENSMUST00000202306.2	398	2	-12	-3	-12	3	multi-exon	FALSE	canonical	3	169	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTTTTGTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	44513556	44529155	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_44513754_44528939
tx.963	chr1	-	2724	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	-3	898	-3	0	multi-exon	TRUE	canonical	3	321	junction_5	41.9044672439586	629	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGAGTCTTCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	160898231	160869068	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
tx.9630	chr18	-	7858	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	-33	-4219	-15	-1	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATTTGGATTTAAT	NA	False	NA	NA	False	NA	NA	NA	44795366	44558127	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
tx.9631	chr18	+	6464	30	FSM	ENSMUSG00000034653.12	ENSMUST00000037763.11	7215	30	739	12	739	-12	multi-exon	FALSE	canonical	3	27	junction_3	9.69634080312122	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGAAATACTATGAAG	NA	False	NA	NA	False	NA	NA	NA	44961551	45022772	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
tx.9632	chr18	+	2783	8	FSM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	-737	-321	-52	0	multi-exon	FALSE	canonical	2	15	junction_3	2.55550625999976	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTTGTTTGGTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	45692483	45818950	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45810003_45810132_45816137_45816208_45818341
tx.9633	chr18	-	5148	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	166	2163	0	-2163	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46413894	46370580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
tx.9634	chr18	-	2775	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	15	11	15	-11	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTTGCCCGTTGGTTG	2728	False	NA	NA	False	NA	NA	NA	46444980	46415228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
tx.9635	chr18	-	2216	9	NIC	ENSMUSG00000071855.6	novel	2801	10	NA	NA	-11	-463	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	22.4468121344658	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTGGCACCATTTTCT	2739	False	NA	NA	False	NA	NA	NA	46444969	46415680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_46416354_46416743_46416863_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
tx.9636	chr18	-	5263	2	ISM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	1246	5	1246	-5	3prime_fragment	FALSE	canonical	3	135	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTTAAGTGTGCTCTC	NA	False	NA	NA	False	NA	NA	NA	46657792	46634817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_46639457_46657168
tx.9637	chr18	-	5699	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	24	3	24	-3	multi-exon	FALSE	canonical	3	135	junction_1	21.5	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGTGTGCTCTCAT	NA	False	NA	NA	False	NA	NA	NA	46659014	46634815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_46639457_46657168_46657897_46658684
tx.9638	chr18	-	3072	3	FSM	ENSMUSG00000056130.11	ENSMUST00000070084.11	4204	3	36	1096	36	-1096	multi-exon	FALSE	canonical	3	7	junction_1	2	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGACTATTGGTCTCAT	9541	False	NA	NA	False	NA	NA	NA	46707564	46691453	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_46694140_46705867_46705971_46707281
tx.9639	chr18	-	3431	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	8	-2091	8	-2	multi-exon	FALSE	canonical	3	571	junction_1	23	1016	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATTGCCTTCACTTGTT	NA	False	NA	NA	False	NA	NA	NA	46730594	46719007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_46721756_46726315_46726562_46730157
tx.964	chr1	+	4246	4	FSM	ENSMUSG00000026708.17	ENSMUST00000028035.14	4883	4	243	394	6	2	multi-exon	FALSE	canonical	3	79	junction_2	20.7417989148054	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTCCAATTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	160898525	160913896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477
tx.9640	chr18	+	2856	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	7	2	1	-2	multi-exon	FALSE	canonical	3	1498	junction_1	106	2144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTAAATGTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	46730777	46743276	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_46730868_46731707_46731768_46740570
tx.9641	chr18	-	1544	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	40	11	0	0	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATTGCCTTTTTGATG	2617	False	NA	NA	False	NA	NA	NA	46861422	46846270	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
tx.9642	chr18	-	2471	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	13	2281	-9	-2281	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	324	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAGAATAACTTATTGT	NA	False	NA	NA	False	NA	NA	NA	46874633	46865491	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
tx.9643	chr18	+	1356	7	NIC	ENSMUSG00000024480.10	novel	978	7	NA	NA	6	-9	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	269.615157833037	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGCAACTGTCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	46874948	46923681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_46875149_46887437_46887530_46890448_46890503_46891069_46891182_46912254_46912327_46913727_46913836_46922963
tx.9644	chr18	+	1298	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	13	209	-9	-6	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAACTGTCAGTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	46874955	46923684	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
tx.9645	chr18	+	2251	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	0	6	0	4	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTTCAGGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	47054881	47067293	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
tx.9646	chr18	+	1409	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234280.2	600	6	-14	-795	0	0	multi-exon	FALSE	canonical	3	187	junction_3	477.712298355401	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	47091927	47221062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47123545_47123657_47219318_47219379_47220094
tx.9647	chr18	+	1568	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	42	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	814	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	47091924	47221062	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
tx.9648	chr18	+	1452	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234701.2	528	6	-20	-904	-1	-3	multi-exon	FALSE	canonical	3	144	junction_2	502.986441169143	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	NA	False	NA	NA	NA	47091926	47221059	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_47091996_47093482_47093574_47100806_47100963_47123545_47123657_47219318_47219379_47220094
tx.9649	chr18	-	2931	5	FSM	ENSMUSG00000024505.17	ENSMUST00000237137.2	1484	5	-13	-1434	-13	0	multi-exon	FALSE	canonical	3	24	junction_2	81.4996165635152	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	49888647	49829211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_49831568_49833325_49833455_49857179_49857275_49861435_49861527_49888387
tx.965	chr1	+	1583	5	NNC	ENSMUSG00000026708.17	novel	1910	5	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	50.1023951523278	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTCCAATTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	160898510	160913896	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_160898927_160902326_160902501_160905939_160906051_160910477_160911021_160913557
tx.9650	chr18	-	2803	4	FSM	ENSMUSG00000024505.17	ENSMUST00000025383.10	1389	4	-19	-1395	15	-39	multi-exon	FALSE	canonical	3	19	junction_2	94.5597988341534	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTCCTGAAGATGTAAG	NA	False	NA	NA	False	NA	NA	NA	49888653	49829250	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_49831568_49833325_49833455_49861435_49861527_49888387
tx.9651	chr18	-	2461	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	18	666	-16	662	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTATGATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	49888650	49829877	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
tx.9652	chr18	+	11388	43	FSM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-69	0	-69	0	multi-exon	TRUE	canonical	3	56	junction_4	23.9744407551836	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	49965667	50097321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
tx.9653	chr18	+	11314	43	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	27.3372321758906	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	49965716	50097321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981759_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
tx.9654	chr18	+	7655	26	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	45362	-10	-16064	10	3prime_fragment	FALSE	canonical	3	63	junction_2	19.7331801795859	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTTGTTTTAAGAAAT	9839	False	NA	NA	False	NA	NA	NA	50011098	50097331	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
tx.9655	chr18	+	5219	20	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	60837	0	-589	0	3prime_fragment	FALSE	canonical	3	97	junction_4	13.3221328764103	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	278	False	NA	NA	False	NA	NA	NA	50026573	50097321	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
tx.9656	chr18	+	5002	15	ISM	ENSMUSG00000037416.14	ENSMUST00000041772.6	12247	43	79644	1	-10072	-1	3prime_fragment	FALSE	canonical	3	108	junction_3	10.3094963158107	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTGGCTCTTAAGTGT	6873	False	NA	NA	False	NA	NA	NA	50045707	50098539	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
tx.9657	chr18	+	3189	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	45	-2232	-19	4	multi-exon	FALSE	canonical	3	36	junction_1	0	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAATTGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	50112538	50226300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_50112694_50223266
tx.9658	chr18	+	3133	2	NNC	ENSMUSG00000062210.14	novel	1002	2	NA	NA	29786	9	intron_retention	FALSE	canonical	1	1	junction_1	0	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTGTTTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	50216134	50226305	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_50216229_50223266
tx.9659	chr18	+	2650	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	27	7	27	-7	multi-exon	FALSE	canonical	3	285	junction_3	18.279183363144	342	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCCTTCCTGCTCCTC	NA	False	NA	NA	False	NA	NA	NA	50261294	50329329	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
tx.966	chr1	+	1833	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	73	4	-52	-4	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTGAAGTTATTTATTC	NA	False	NA	NA	False	NA	NA	NA	160898409	160913904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
tx.9660	chr18	+	2006	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	-10	660	-10	-660	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	387	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTACTTGTGACTTATCT	NA	False	NA	NA	False	NA	NA	NA	52598754	52624343	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
tx.9661	chr18	+	2593	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_8	183.6769837922	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGGCCTGCATATA	NA	False	NA	NA	False	NA	NA	NA	52598764	52625005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624796_52624860
tx.9662	chr18	+	2012	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	25	30	-18	-30	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	664	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATAAATTATTTG	NA	False	NA	NA	False	NA	NA	NA	53309412	53353907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
tx.9663	chr18	+	2049	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	-70	-2	-70	2	multi-exon	FALSE	canonical	3	19	junction_3	2.70801280154532	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGAGTTTGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	53378663	53523994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
tx.9664	chr18	+	2176	8	NNC	ENSMUSG00000024535.17	novel	994	8	NA	NA	-77	3	intron_retention	TRUE	canonical	2	2	junction_4	10.3292728471573	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	53378656	53523995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53516377_53516497_53517688_53517722_53518249_53518315_53522588
tx.9665	chr18	-	1321	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	81	1	81	-1	multi-exon	FALSE	canonical	3	373	junction_3	12.8354976529934	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTTTGCAAGACTTT	NA	False	NA	NA	False	NA	NA	NA	53551106	53539404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
tx.9666	chr18	-	1761	4	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	67	0	intron_retention	FALSE	canonical	3	375	junction_3	11.7756811551038	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	NA	False	NA	NA	NA	53551120	53539403	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_53540138_53542196_53542382_53544058_53544692_53550911
tx.9667	chr18	-	3423	3	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	81	-1	intron_retention	FALSE	canonical	3	375	junction_2	10	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTTTGCAAGACTTT	NA	False	NA	NA	False	NA	NA	NA	53551106	53539404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_53540138_53542196_53544692_53550911
tx.9668	chr18	-	2457	2	ISM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	7267	1	7267	-1	3prime_fragment	FALSE	canonical	3	395	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTTTGCAAGACTTT	NA	False	NA	NA	False	NA	NA	NA	53543920	53539404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_53540138_53542196
tx.9669	chr18	-	4588	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-35	1	-19	-1	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	518	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGGTCGGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	53877654	53814795	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
tx.967	chr1	+	1626	5	FSM	ENSMUSG00000026708.17	ENSMUST00000143486.7	1997	5	-15	386	1	0	multi-exon	FALSE	canonical	3	21	junction_2	42.0200844834943	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTTATTTATTCTGTT	NA	False	NA	NA	False	NA	NA	NA	160898520	160913908	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_160898927_160902326_160902501_160905898_160906051_160910477_160911021_160913557
tx.9670	chr18	-	4627	20	ISM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	65	2	58	-2	3prime_fragment	FALSE	canonical	1	72	junction_13	47.6573062243881	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTGGTCGGTCTCT	NA	False	NA	NA	False	NA	NA	NA	53877554	53814796	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353
tx.9671	chr18	+	4370	13	FSM	ENSMUSG00000073563.4	ENSMUST00000237880.2	2180	13	-88	-2102	-22	27	multi-exon	FALSE	canonical	3	18	junction_10	71.3267130884355	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	53995171	54088647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
tx.9672	chr18	+	4368	13	NNC	ENSMUSG00000073563.4	novel	2180	13	NA	NA	-23	27	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	70.1610745990174	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	53995170	54088647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
tx.9673	chr18	+	4439	14	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-67	30	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	79.7783912847102	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCCCCTTTCCTCTA	NA	False	NA	NA	False	NA	NA	NA	53995126	54088650	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54081716_54081741_54086316
tx.9674	chr18	+	4296	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	27	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_11	65.9298343358722	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	53995170	54088647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
tx.9675	chr18	+	4394	14	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-22	27	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	80.3450399451452	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	53995171	54088647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54081716_54081741_54086316
tx.9676	chr18	+	4298	13	FSM	ENSMUSG00000073563.4	ENSMUST00000069597.8	4249	13	-22	-27	-22	27	multi-exon	FALSE	canonical	3	32	junction_11	67.2040838706167	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	53995171	54088647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
tx.9677	chr18	+	4272	12	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	27	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_8	32.497425199977	155	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	53995170	54088647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
tx.9678	chr18	+	4274	12	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-22	27	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	36.435156938828	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	53995171	54088647	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
tx.9679	chr18	+	2598	14	FSM	ENSMUSG00000001700.11	ENSMUST00000070166.6	2605	14	4	3	4	-3	multi-exon	FALSE	canonical	1	2	junction_2	2.64910390118809	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGCTGTTTCCTGCA	2615	False	NA	NA	False	NA	NA	NA	56565207	56636861	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_56565430_56602604_56602725_56607090_56607203_56609674_56609742_56611920_56612025_56615692_56615789_56618283_56618356_56618447_56618529_56621822_56621935_56622686_56622810_56623742_56623831_56624966_56625072_56630391_56630486_56635659
tx.968	chr1	-	4034	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	34	4	34	1	multi-exon	FALSE	canonical	3	70	junction_3	12.7525722571391	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTTTTGTGTTGGATT	NA	False	NA	NA	False	NA	NA	NA	160959047	160915948	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
tx.9680	chr18	-	1879	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	35	0	35	0	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	308	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	56695346	56659815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
tx.9681	chr18	-	2075	20	FSM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	34	2022	34	0	multi-exon	FALSE	canonical	3	60	junction_19	109.003545140448	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	2888	False	NA	NA	False	NA	NA	NA	56705989	56659815	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
tx.9682	chr18	+	3870	4	ISM	ENSMUSG00000008301.12	ENSMUST00000130163.8	1386	5	10569	-315	190	-208	3prime_fragment	FALSE	canonical	3	396	junction_3	27.6325090347503	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTCAGCTGTTACA	NA	False	NA	NA	False	NA	NA	NA	56706083	56720576	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_56709121_56713251_56713373_56717362_56717447_56719948
tx.9683	chr18	+	1541	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	192	209	192	-209	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	285	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTTCAGCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	56706085	56720575	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
tx.9684	chr18	+	2902	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-59	0	-59	0	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	1595	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	False	NA	NA	False	NA	NA	NA	56840825	56886496	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
tx.9686	chr18	-	2390	5	NIC	ENSMUSG00000024592.16	novel	726	6	NA	NA	4	-16	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	31.2329953734828	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATGCCACCAAAA	NA	False	NA	NA	False	NA	NA	NA	57108422	57088920	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108381
tx.9687	chr18	-	2394	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	6	0	6	0	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCTGTTGGTAGTT	NA	False	NA	NA	False	NA	NA	NA	57108434	57088904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
tx.9688	chr18	-	2367	4	ISM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	1882	0	1760	0	3prime_fragment	FALSE	canonical	3	83	junction_1	12.0277457017791	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCTGTTGGTAGTT	NA	False	NA	NA	False	NA	NA	NA	57106558	57088904	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455
tx.9689	chr18	+	4817	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	1	212	1	-209	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	565	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57487813	57525816	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
tx.969	chr1	-	1439	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	51	897	1	6	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	871	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGTCATGTTTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	161078738	161068578	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
tx.9690	chr18	+	9969	8	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	1	3	1	0	intron_retention	FALSE	canonical	3	500	junction_4	180.426026449645	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTGCAATGATTTAA	NA	False	NA	NA	False	NA	NA	NA	57487813	57526025	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245
tx.9691	chr18	+	4304	5	NIC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-13	-6	combination_of_known_junctions	FALSE	canonical	3	294	junction_1	276.069284781918	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCAAAGGTGTGCAATG	NA	False	NA	NA	False	NA	NA	NA	57506950	57526019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522291
tx.9692	chr18	+	4275	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	-40	-3712	-40	-6	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCAAAGGTGTGCAATG	NA	False	NA	NA	False	NA	NA	NA	57506923	57526019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
tx.9693	chr18	+	6763	27	FSM	ENSMUSG00000024597.12	ENSMUST00000115366.3	6520	27	-247	4	-247	-4	multi-exon	TRUE	canonical	3	112	junction_7	17.8975139591274	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTCTTGCCTTTACCTG	NA	False	NA	NA	False	NA	NA	NA	58011502	58079889	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
tx.9694	chr18	+	4972	4	NIC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	482	junction_3	34.7658836600865	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGGGTCCTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	58792540	58813440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_58792870_58804279_58804400_58804519_58806439_58810836
tx.9695	chr18	+	3373	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	4	0	4	0	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	889	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGGGTCCTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	58792541	58813440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
tx.9696	chr18	-	1460	2	NNC	ENSMUSG00000038059.8	novel	1990	2	NA	NA	11807	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTGTTTGTTTGTT	7262	False	NA	NA	False	NA	NA	NA	60622841	60607262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_60608658_60622776
tx.9697	chr18	-	1572	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	418	0	7	0	multi-exon	FALSE	canonical	3	18	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	60634641	60607262	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_60608658_60634464
tx.9698	chr18	+	3728	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	1	9	1	-9	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	339	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTCTGTTTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	60659273	60691829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
tx.9699	chr18	+	2104	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	24	82	-4	-82	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	702	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACTTATGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	60693831	60705800	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
tx.97	chr1	-	5351	22	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	0	-119	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	13.5502759132153	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGCAGGTGTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	24139422	24050444	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069022_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
tx.970	chr1	-	3363	7	ISM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	41747	729	-5665	-729	3prime_fragment	FALSE	canonical	3	115	junction_2	16.7696816374737	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	161662504	161644411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604
tx.9700	chr18	-	7992	15	NIC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_14	10.0957153975216	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGGTCTTGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	60881577	60817565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881382
tx.9701	chr18	-	7973	15	FSM	ENSMUSG00000054008.10	ENSMUST00000237783.2	6478	15	-26	-1469	-26	0	multi-exon	FALSE	canonical	2	17	junction_9	9.29367790380062	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGGTCTTGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	60881748	60817565	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881572
tx.9702	chr18	+	544	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	53	0	-16	0	multi-exon	FALSE	canonical	3	20921	junction_1	2863.01274883644	3873	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	-33	True	NA	NA	NA	60907720	60911618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
tx.9703	chr18	+	508	4	FSM	ENSMUSG00000024608.12	ENSMUST00000122279.2	667	4	160	-1	160	0	multi-exon	FALSE	canonical	3	24831	junction_3	1445.1337500576	438	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	-10	True	NA	NA	NA	60909470	60911618	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_60909624_60910001_60910164_60910884_60910962_60911502
tx.9704	chr18	+	1386	8	FSM	ENSMUSG00000024610.16	ENSMUST00000050487.16	1224	8	-162	0	-162	0	multi-exon	FALSE	canonical	3	17	junction_2	5.45108115095397	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTTCTGCCTCTTCA	NA	False	NA	NA	False	NA	NA	NA	60936757	60945724	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_60937083_60940979_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944930_60944994_60945223
tx.9705	chr18	-	4621	26	FSM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	-26	0	4	0	multi-exon	FALSE	canonical	2	549	junction_9	234.649375878139	1017	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	NA	False	NA	NA	NA	60982027	60946826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
tx.9706	chr18	-	4513	25	FSM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	16	0	4	0	multi-exon	FALSE	canonical	2	677	junction_9	198.19802369656	1213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	NA	False	NA	NA	NA	60982027	60946826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
tx.9707	chr18	-	3343	14	FSM	ENSMUSG00000052026.9	ENSMUST00000025520.10	3366	14	23	0	7	0	multi-exon	FALSE	canonical	2	6	junction_10	5.15671561910596	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTACCTGACTCTGCTAC	NA	False	NA	NA	False	NA	NA	NA	61147271	61128451	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61147048
tx.9708	chr18	-	2201	2	NIC	ENSMUSG00000024619.9	novel	1750	3	NA	NA	-19	0	intron_retention	FALSE	canonical	3	1110	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCCATCCTTTCTCGT	7735	False	NA	NA	False	NA	NA	NA	61169290	61151933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_61153592_61168747
tx.9709	chr18	-	1874	4	NNC	ENSMUSG00000024619.9	novel	1750	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	439.390486924785	43	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCCATCCTTTCTCGT	7733	False	NA	NA	False	NA	NA	NA	61169292	61151933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_61153014_61153445_61153592_61157113_61157217_61168747
tx.971	chr1	-	5726	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-149	-729	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	27.3306959689789	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	269	False	NA	NA	False	NA	NA	NA	161704400	161644411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
tx.9710	chr18	-	1771	3	FSM	ENSMUSG00000024619.9	ENSMUST00000025521.9	1750	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	995	junction_1	57.5	1332	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCCATCCTTTCTCGT	7733	False	NA	NA	False	NA	NA	NA	61169292	61151933	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_61153014_61153445_61153592_61168747
tx.9711	chr18	+	4064	17	NNC	ENSMUSG00000024620.12	novel	5407	23	NA	NA	20500	5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	4.09219913371771	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTCAGGGTTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	61198771	61218138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_61198980_61199569_61199686_61201167_61201292_61201816_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
tx.9712	chr18	-	5097	21	FSM	ENSMUSG00000024622.9	ENSMUST00000091884.6	5103	21	6	0	6	0	multi-exon	FALSE	canonical	3	70	junction_14	23.3398264775041	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5830	False	NA	NA	False	NA	NA	NA	61310116	61264348	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
tx.9713	chr18	-	5193	20	FSM	ENSMUSG00000024622.9	ENSMUST00000235480.2	5131	20	-48	-14	5	-1	multi-exon	FALSE	canonical	3	101	junction_18	18.508813502905	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGAGCCTGTTCAATGC	5829	False	NA	NA	False	NA	NA	NA	61310117	61264349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
tx.9714	chr18	-	3246	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	20	4548	20	-245	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCAGTGGAAGTCTTTG	8735	False	NA	NA	False	NA	NA	NA	61344664	61330538	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
tx.9715	chr18	-	3637	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	15	4	15	-4	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATGGCTCTGATTA	3308	False	NA	NA	False	NA	NA	NA	61533487	61431210	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
tx.9716	chr18	+	4071	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	10	2	10	-2	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1290	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGGAGAGGCTGGTTGT	438	False	NA	NA	False	NA	NA	NA	61688354	61723130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
tx.9717	chr18	+	4196	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	-60	-1877	5	-2	multi-exon	TRUE	canonical	3	229	junction_5	708.334701959462	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGGAGAGGCTGGTTGT	433	False	NA	NA	False	NA	NA	NA	61688349	61723130	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
tx.9718	chr18	+	4111	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-29	-1759	10	2	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	953	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGAGGCTGGTTGTCTCT	438	False	NA	NA	False	NA	NA	NA	61688354	61723134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
tx.9719	chr18	+	4154	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-403	-2529	12	-1	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGAGAGGCTGGTTGTC	440	False	NA	NA	False	NA	NA	NA	61688356	61723131	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
tx.972	chr1	-	5765	24	FSM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	-167	729	-167	-729	multi-exon	FALSE	canonical	3	81	junction_17	25.1317135224534	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	251	False	NA	NA	False	NA	NA	NA	161704418	161644411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
tx.9720	chr18	-	2065	7	NNC	ENSMUSG00000024579.8	novel	2017	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	34.3693177121688	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGACTTATTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	61840712	61829907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836423_61836466_61836582_61836790_61840564
tx.9721	chr18	-	2031	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	-13	-1	-13	1	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTATTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61840719	61829906	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
tx.9722	chr18	-	4032	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-4	10	-2	-10	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	291	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAACACCTCTCGAGT	NA	False	NA	NA	False	NA	NA	NA	61859398	61845504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
tx.9723	chr18	-	6667	3	NIC	ENSMUSG00000024580.9	novel	4038	4	NA	NA	-11	-10	intron_retention	FALSE	canonical	3	252	junction_2	10.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAACACCTCTCGAGT	NA	False	NA	NA	False	NA	NA	NA	61859407	61845504	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_61851907_61852772_61852927_61859296
tx.9724	chr18	-	1700	5	NNC	ENSMUSG00000033032.16	novel	2842	16	NA	NA	49250	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	5.2618912949623	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTCAGAGGGTAGCTG	NA	False	NA	NA	False	NA	NA	NA	61870432	61863333	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870253
tx.9725	chr18	-	3420	19	FSM	ENSMUSG00000033032.16	ENSMUST00000120472.2	3444	19	23	1	-19	-1	multi-exon	FALSE	canonical	1	2	junction_17	8.65740245593045	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTCAGAGGGTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	61919750	61863332	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633_61888746_61889910_61890006_61890722_61890807_61891670_61891800_61919646
tx.9726	chr18	+	4592	17	FSM	ENSMUSG00000045629.9	ENSMUST00000051720.6	4536	17	-54	-2	-54	2	multi-exon	TRUE	canonical	3	14	junction_11	4.02336923485777	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACCCTTTTGTCACCTTT	NA	False	NA	NA	False	NA	NA	NA	62086091	62148788	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
tx.9727	chr18	-	4382	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-37	-91	-37	91	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	338	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTTGCCATGGACTTG	NA	False	NA	NA	False	NA	NA	NA	62681803	62637134	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
tx.9728	chr18	-	4612	15	ISM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-34	8855	-34	861	5prime_fragment	FALSE	canonical	3	214	junction_14	35.5617456700601	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTCTGTCCTTGGTA	NA	False	NA	NA	False	NA	NA	NA	62681800	62646080	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
tx.9729	chr18	+	3432	5	FSM	ENSMUSG00000071847.14	ENSMUST00000236135.2	10879	5	71	7376	-27	1339	multi-exon	FALSE	canonical	3	18	junction_2	2.8613807855649	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCACGAAATACGTCTT	NA	False	NA	NA	False	NA	NA	NA	63055372	63086874	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_63055793_63066945_63067130_63069976_63070509_63082945_63083268_63084900
tx.973	chr1	-	5728	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-163	-729	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	29.1913394266289	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	255	False	NA	NA	False	NA	NA	NA	161704414	161644411	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
tx.9730	chr18	+	3519	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.6791015146086	330	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	NA	False	NA	NA	NA	63110952	63132521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
tx.9731	chr18	+	3649	12	NNC	ENSMUSG00000024581.14	novel	1129	13	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	104.516201440908	19	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGTCAGTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	63110970	63132519	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63125411_63125562_63127382_63127463_63128033_63128164_63129887
tx.9732	chr18	-	4382	9	NNC	ENSMUSG00000024583.4	novel	1998	9	NA	NA	37	-1	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_2	401.332292963076	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTATTTGTTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	63825471	63794165	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_63797404_63804652_63804758_63806868_63806946_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
tx.9733	chr18	-	2715	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	37	1591	37	682	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	415	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCATCCTATTTGACT	NA	False	NA	NA	False	NA	NA	NA	63825471	63795755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
tx.9734	chr18	+	6999	27	FSM	ENSMUSG00000040560.11	ENSMUST00000236879.2	6987	27	-6	-6	-4	6	multi-exon	FALSE	canonical	3	34	junction_9	8.74837262973172	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTTTATCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	63841779	64122831	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
tx.9735	chr18	-	2916	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	23	3632	-4	715	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	408	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTTCTTTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	64622148	64589616	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
tx.9736	chr18	-	2780	10	FSM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	-13	-708	-3	704	multi-exon	FALSE	canonical	3	22	junction_9	95.9785212597583	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTTCAAACAGAACATTT	NA	False	NA	NA	False	NA	NA	NA	64622147	64589627	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64621971
tx.9737	chr18	-	2594	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	93	0	0	0	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	2462	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	64649586	64632728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
tx.9738	chr18	-	2597	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	137	11	0	0	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	3925	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	64649586	64632728	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
tx.9739	chr18	+	3658	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-270	1414	-17	-4	multi-exon	TRUE	canonical	3	102	junction_13	18.1799042339286	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGCATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65020758	65346384	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
tx.974	chr1	-	5751	24	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-166	-730	combination_of_known_junctions	FALSE	canonical	3	62	junction_17	27.0440374610156	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTCTTCTGTCCT	252	False	NA	NA	False	NA	NA	NA	161704417	161644412	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
tx.9740	chr18	+	5098	17	FSM	ENSMUSG00000032688.10	ENSMUST00000224056.3	4113	17	32	-1017	8	-245	multi-exon	FALSE	canonical	3	12	junction_12	7.09643396361863	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTCTCTTGAAGACGC	NA	False	NA	NA	False	NA	NA	NA	65564040	65611893	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
tx.9741	chr18	+	5934	10	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-99	7	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	22.2660678562196	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGAGTTATTGGTGGGT	NA	False	NA	NA	False	NA	NA	NA	65713816	65822019	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
tx.9742	chr18	+	5600	6	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	33.5952377577537	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	NA	NA	NA	65713841	65822514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
tx.9743	chr18	+	5152	7	NIC	ENSMUSG00000042439.14	novel	5471	8	NA	NA	-52	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	36.5224436324966	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGAGCTTCTTCAAGAG	NA	False	NA	NA	False	NA	NA	NA	65713863	65822005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_65714220_65715797_65715881_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
tx.9744	chr18	+	5434	8	ISM	ENSMUSG00000042439.14	ENSMUST00000237553.2	5175	10	41381	-1576	-1672	0	3prime_fragment	FALSE	canonical	3	46	junction_1	18.2711995964654	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	NA	NA	NA	65756536	65822514	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
tx.9745	chr18	+	801	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	35	24	0	0	multi-exon	FALSE	canonical	3	349	junction_3	14.5244621242922	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTCCTTTTGTGGCC	NA	False	NA	NA	False	NA	NA	NA	65933620	65950731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
tx.9746	chr18	+	2823	5	FSM	ENSMUSG00000024516.14	ENSMUST00000139538.9	2829	5	1	5	1	0	multi-exon	FALSE	canonical	3	355	junction_1	12.6565200588471	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTCCTTTTGTGGCC	NA	False	NA	NA	False	NA	NA	NA	65933621	65950731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_65933783_65942515_65942626_65945735_65948029_65949891_65949950_65950530
tx.9747	chr18	+	5580	3	ISM	ENSMUSG00000024516.14	ENSMUST00000139538.9	2829	5	9087	5	3073	0	3prime_fragment	FALSE	canonical	3	364	junction_2	10	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTCCTTTTGTGGCC	NA	False	NA	NA	False	NA	NA	NA	65942707	65950731	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_65948029_65949891_65949950_65950530
tx.9748	chr18	-	4663	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	14	-1	-4	1	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	612	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTTTTTCCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66135696	66113826	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
tx.9749	chr18	-	3553	14	FSM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	12	16	-6	3	multi-exon	FALSE	canonical	3	538	junction_1	125.2370060817	1022	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	NA	False	NA	NA	NA	66135698	66113824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
tx.975	chr1	+	1484	2	FSM	ENSMUSG00000026698.9	ENSMUST00000028021.7	2196	2	8	704	8	-704	multi-exon	FALSE	canonical	3	13	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGTCTAGTATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	161796764	161799195	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_161796849_161797795
tx.9750	chr18	-	5734	11	FSM	ENSMUSG00000046318.17	ENSMUST00000130300.3	6572	11	837	1	2	-1	multi-exon	TRUE	canonical	0	0	junction_9	3.55527776692624	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGCTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	66424901	66189926	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_66194592_66198939_66198976_66199653_66199690_66199799_66199940_66204271_66204393_66209378_66209483_66216165_66216319_66217808_66217944_66227068_66227122_66424202_66424284_66424691
tx.9751	chr18	+	2660	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	62	5	2	-5	multi-exon	FALSE	canonical	3	99	junction_2	7	166	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCACTGGTCTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	66591665	66598626	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_66591884_66593913_66594070_66596340
tx.9752	chr18	-	3015	2	ISM	ENSMUSG00000118216.2	ENSMUST00000235553.2	671	3	15948	-2475	15934	4	3prime_fragment	FALSE	canonical	3	8	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTCAGCGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	67067098	67056537	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_67059444_67066989
tx.9753	chr18	+	5498	12	FSM	ENSMUSG00000024524.18	ENSMUST00000076605.9	3470	12	524	-2552	-204	-5	multi-exon	FALSE	canonical	2	7	junction_3	2.38452309974618	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTGGGTTGTTTCGG	NA	False	NA	NA	False	NA	NA	NA	67266616	67359858	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_67267042_67267283_67267357_67268382_67268438_67268589_67268710_67324440_67324539_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
tx.9754	chr18	-	2309	11	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	11.9348229982686	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGAGTTTGGATCTTT	NA	False	NA	NA	False	NA	NA	NA	67378724	67358118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
tx.9755	chr18	-	2303	11	FSM	ENSMUSG00000062526.5	ENSMUST00000073054.5	2494	11	186	5	23	-5	multi-exon	FALSE	canonical	3	17	junction_4	12.1016527796826	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGAGTTTGGATCTTT	NA	False	NA	NA	False	NA	NA	NA	67378715	67358118	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
tx.9756	chr18	+	1650	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	25	3379	25	2184	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	801	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTATCGAAGCCCAC	NA	False	NA	NA	False	NA	NA	NA	67422280	67452163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
tx.9757	chr18	+	2820	7	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	8	2184	intron_retention	FALSE	canonical	3	1009	junction_2	97.2585329018602	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTATCGAAGCCCAC	NA	False	NA	NA	False	NA	NA	NA	67422263	67452163	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
tx.9758	chr18	+	3307	2	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	5584	1931	intron_retention	FALSE	canonical	3	1255	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	67447242	67451910	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_67450104_67451464
tx.9759	chr18	+	929	5	FSM	ENSMUSG00000024526.10	ENSMUST00000025404.10	1115	5	185	1	185	-1	multi-exon	FALSE	canonical	1	47	junction_1	40.4042077016738	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGCAACTGGTTTG	6393	False	NA	NA	False	NA	NA	NA	67476858	67500854	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_67476911_67491779_67491925_67493165_67493313_67499444_67499627_67500451
tx.976	chr1	-	2822	5	ISM	ENSMUSG00000026694.20	ENSMUST00000159817.9	2482	8	4833	-5	673	5	3prime_fragment	FALSE	canonical	3	82	junction_4	11.7765657133139	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGTTTATCTCAAGT	NA	False	NA	NA	False	NA	NA	NA	162371258	162361242	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826
tx.9760	chr18	+	1765	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	606	junction_3	34.2928563989645	687	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTCTCTTGAACTTC	NA	False	NA	NA	False	NA	NA	NA	67523779	67535819	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
tx.9761	chr18	-	3101	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	-8	1	-8	-1	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	1435	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGGGTTGCCATGTTGT	NA	False	NA	NA	False	NA	NA	NA	67582250	67537834	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
tx.9762	chr18	+	2146	7	FSM	ENSMUSG00000024530.9	ENSMUST00000025411.9	1404	7	4	-746	4	746	multi-exon	FALSE	canonical	3	4	junction_6	3.34995854037363	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTTGTGACTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	67597939	67613651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67611019_67611132_67612137
tx.9763	chr18	+	1301	8	NNC	ENSMUSG00000024530.9	novel	1404	7	NA	NA	19	746	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	4.10077145554495	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTTGTGACTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	67597979	67613651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67611019_67611132_67612137_67612207_67613011
tx.9764	chr18	-	5440	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-112	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	23.13227271187	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTGTTGAATTCC	NA	False	NA	NA	False	NA	NA	NA	67743972	67621281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
tx.9765	chr18	-	5187	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-120	266	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	138	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAATGTGTCCCACTG	NA	False	NA	NA	False	NA	NA	NA	67743980	67621577	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
tx.9766	chr18	-	5714	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-112	257	intron_retention	FALSE	canonical	3	61	junction_14	10.5279026730815	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGACCATGAAGAAATGT	NA	False	NA	NA	False	NA	NA	NA	67743972	67621586	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
tx.9767	chr18	-	3560	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	20.7101204947989	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTTTTGGATGTCTTG	807	False	NA	NA	False	NA	NA	NA	67774429	67750870	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770396_67771335_67771412_67773077_67773234_67774181
tx.9768	chr18	-	6623	10	NIC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-161	4	intron_retention	FALSE	canonical	3	67	junction_4	9.43986817233753	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGATGTCTTGACTTT	669	False	NA	NA	False	NA	NA	NA	67774567	67750865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_67752443_67752605_67752824_67756206_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
tx.9769	chr18	-	3639	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-60	-3	-60	3	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGATGTCTTGACTT	770	False	NA	NA	False	NA	NA	NA	67774466	67750866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
tx.977	chr1	-	2975	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	22	1544	0	8	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTATCTCAAGTATT	NA	False	NA	NA	False	NA	NA	NA	162376098	162361239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
tx.9770	chr18	+	3159	6	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	-17	7	intron_retention	FALSE	canonical	3	414	junction_3	24.7434839907399	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTGGAAAGTATCTCT	NA	False	NA	NA	False	NA	NA	NA	67774651	67787239	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_67774806_67777378_67777551_67779062_67781317_67781842_67782017_67786222_67786344_67786955
tx.9771	chr18	+	1086	7	FSM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	-13	-14	-13	14	multi-exon	FALSE	canonical	3	396	junction_3	27.1871088733041	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGTATCTCTTTGAATC	NA	False	NA	NA	False	NA	NA	NA	67774655	67787246	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
tx.9772	chr18	-	1573	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	-4	-1	3	0	multi-exon	FALSE	canonical	0	0	junction_7	132.404915801473	310	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGGTTTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	67857662	67798580	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
tx.9773	chr18	-	2666	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	3	-2	3	2	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCCCTTACCTTTGT	NA	False	NA	NA	False	NA	NA	NA	67857662	67804279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
tx.9774	chr18	+	3444	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_8	591.206393740798	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTGTTGTCTTATAAA	NA	False	NA	NA	False	NA	NA	NA	67907972	67928553	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926286
tx.9775	chr18	+	3488	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	51	3	-48	-3	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	2246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGTTGTCTTATAAAA	NA	False	NA	NA	False	NA	NA	NA	67907996	67928554	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
tx.9776	chr18	+	4565	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	7	-2888	7	-6	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATCTGTTGTCTTATA	NA	False	NA	NA	False	NA	NA	NA	67908051	67928551	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
tx.9777	chr18	+	8093	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_43	31.5891370608143	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	110	False	NA	NA	False	NA	NA	NA	67933179	68018241	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
tx.9778	chr18	+	2235	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	-224	-573	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	4.61880215351701	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTATCATGGGGAAGA	6400	False	NA	NA	False	NA	NA	NA	68066103	68388049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_68066460_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
tx.9779	chr18	-	3945	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	114	5592	-17	-5592	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	243	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTTCTCCCTGACCT	NA	False	NA	NA	False	NA	NA	NA	68433290	68398849	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
tx.978	chr1	+	2644	8	FSM	ENSMUSG00000026696.16	ENSMUST00000132158.8	2752	8	106	2	-6	-2	multi-exon	FALSE	canonical	3	16	junction_7	107.103040220574	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCACTGTGGCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	162398189	162426651	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162424617
tx.9780	chr18	+	1524	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	23	4519	-14	1089	5prime_fragment	FALSE	canonical	3	765	junction_7	145.735681591328	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTTCTGATACATTTT	NA	False	NA	NA	False	NA	NA	NA	68433448	68453404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296
tx.9781	chr18	+	2054	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	9	2945	9	1	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	508	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	NA	False	NA	NA	NA	68433434	68454978	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
tx.9782	chr18	+	2063	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	6	2939	6	7	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	41	2	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGAGACTCTATAGAC	NA	False	NA	NA	False	NA	NA	NA	68433431	68454984	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
tx.9783	chr18	+	1995	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	5424	2943	782	3	3prime_fragment	FALSE	canonical	3	765	junction_6	146.590889515307	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAATTCTGAGACTCTAT	NA	False	NA	NA	False	NA	NA	NA	68438849	68454980	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
tx.9784	chr18	+	7096	20	NIC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	-34	-44	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	26.5128411891754	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTCTGACACTTTTT	3610	False	NA	NA	False	NA	NA	NA	69479209	69820994	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
tx.9785	chr18	+	4365	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-204	-1969	-17	666	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCTGAAATTTATGTT	3627	False	NA	NA	False	NA	NA	NA	69479226	69818265	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
tx.9786	chr18	+	6601	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	445	-4060	-9	-517	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCTATTTAAAAGATGT	3635	False	NA	NA	False	NA	NA	NA	69479234	69820521	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
tx.9787	chr18	+	3496	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	22	24	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	25.7485174249798	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAACTAAAAAA	3666	False	NA	NA	False	NA	NA	NA	69479265	69817438	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
tx.9788	chr18	+	2447	3	FSM	ENSMUSG00000053477.19	ENSMUST00000146908.2	3693	3	1901	-655	-780	655	multi-exon	FALSE	canonical	3	123	junction_1	14	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGAGCTACAAGAATCTG	NA	False	NA	NA	False	NA	NA	NA	69814670	69818254	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_69814870_69815753_69815895_69816147
tx.9789	chr18	+	1532	2	FSM	ENSMUSG00000053477.19	ENSMUST00000136019.3	1001	2	205	-736	205	26	multi-exon	FALSE	canonical	3	151	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAACTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	69815655	69817440	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_69815895_69816147
tx.979	chr1	+	2182	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	38	-759	1	759	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162398196	162423693	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
tx.9790	chr18	+	1553	11	FSM	ENSMUSG00000038903.14	ENSMUST00000043929.11	1618	11	68	-3	-36	3	multi-exon	FALSE	canonical	3	15	junction_1	8.64869932417586	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCATGTCCTTCCATGT	NA	False	NA	NA	False	NA	NA	NA	70058604	70102558	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
tx.9791	chr18	-	3148	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	63.814060950546	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	70605563	70585281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600913_70601589_70602519_70602849_70604743_70605051_70605361
tx.9792	chr18	-	3306	6	FSM	ENSMUSG00000044906.7	ENSMUST00000212683.2	3317	6	13	-2	8	1	multi-exon	FALSE	canonical	3	13	junction_1	79.1722173492697	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	70605567	70585281	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_70586460_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
tx.9793	chr18	-	3227	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	-6	-930	-6	2	multi-exon	FALSE	canonical	3	72	junction_5	54.5590276672889	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	70605557	70585280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
tx.9794	chr18	-	3500	8	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-6	2	intron_retention	FALSE	canonical	3	98	junction_4	41.1701298496463	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	70605557	70585280	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
tx.9795	chr18	-	2708	9	NIC	ENSMUSG00000038425.19	novel	2736	10	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	108.347747438514	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663312	70641755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70662821
tx.9796	chr18	-	2857	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	-126	5	4	0	multi-exon	FALSE	canonical	3	36	junction_9	94.1501296524877	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663335	70641755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
tx.9797	chr18	-	2425	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_9	93.0357690406634	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663343	70641755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661896_70663258
tx.9798	chr18	-	2428	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	162	1	-4	0	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663343	70641755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
tx.9799	chr18	-	2307	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	116	junction_8	75.0961883187156	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663348	70641755	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
tx.98	chr1	-	4443	8	ISM	ENSMUSG00000026153.16	ENSMUST00000188712.7	5122	21	56020	-3	-1420	3	3prime_fragment	FALSE	canonical	3	41	junction_4	12.2989961428748	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTAATGCTTGCTTAC	NA	False	NA	NA	False	NA	NA	NA	24069587	24050170	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280
tx.980	chr1	-	6429	20	ISM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	35023	1063	-310	0	3prime_fragment	FALSE	canonical	3	77	junction_1	24.5768623030854	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	162533071	162499356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937
tx.9800	chr18	+	1350	3	NNC	ENSMUSG00000024513.17	novel	1290	3	NA	NA	-40	4	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	161	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGTGCCTGGTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	70701364	70715987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_70702039_70713723_70713884_70715471
tx.9801	chr18	+	1329	3	FSM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	-35	-4	-35	4	multi-exon	FALSE	canonical	3	203	junction_2	64.5	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGTGCCTGGTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	70701369	70715987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_70702039_70713723_70713884_70715487
tx.9802	chr18	+	2878	2	ISM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	19	-3	19	3	intron_retention	FALSE	canonical	3	332	junction_1	0	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAAGTGCCTGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	70701423	70715986	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_70702039_70713723
tx.9803	chr18	+	1800	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	153	0	8	0	multi-exon	FALSE	canonical	3	48	junction_4	103.071846570999	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAACTTCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	70701412	70759202	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
tx.9804	chr18	+	3994	2	FSM	ENSMUSG00000037253.9	ENSMUST00000091852.5	3738	2	-258	2	-258	-2	multi-exon	FALSE	canonical	3	119	junction_1	0	346	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTATTCTCCTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	73705856	73725644	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_73706848_73722641
tx.9805	chr18	-	1855	2	ISM	ENSMUSG00000024515.14	ENSMUST00000131339.8	487	3	642	-1404	642	255	3prime_fragment	FALSE	canonical	3	378	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGTTTTTACCCTGA	NA	False	NA	NA	False	NA	NA	NA	73774992	73771824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_73773541_73774853
tx.9806	chr18	-	3650	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-11	-255	-11	255	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	729	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGTTTTTACCCTGA	NA	False	NA	NA	False	NA	NA	NA	73836862	73771824	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
tx.9807	chr18	-	4984	4	FSM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	-18	5	-18	-5	multi-exon	FALSE	canonical	3	22	junction_1	4.32049379893857	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATTTCCTTGTCCTGCG	NA	False	NA	NA	False	NA	NA	NA	73887568	73868113	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_73872372_73875407_73875873_73880237_73880403_73887472
tx.9808	chr18	-	2513	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-14	139	-3	-139	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	416	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTCAGTTACATTAT	357	False	NA	NA	False	NA	NA	NA	73948523	73903112	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
tx.9809	chr18	-	3724	14	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-21	3406	-10	-3406	5prime_fragment	FALSE	canonical	3	442	junction_6	50.9319072055782	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTCTCCAGTGCT	350	False	NA	NA	False	NA	NA	NA	73948530	73906379	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
tx.981	chr1	-	3874	14	ISM	ENSMUSG00000040225.16	ENSMUST00000182593.8	9022	34	47634	-1101	-4658	0	3prime_fragment	FALSE	canonical	3	53	junction_1	27.1996780349897	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	162520416	162499356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304
tx.9810	chr18	-	4637	6	FSM	ENSMUSG00000024558.13	ENSMUST00000091851.10	4594	6	-43	0	-43	0	multi-exon	FALSE	canonical	3	19	junction_5	8.45221864364617	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCAGGAATTGTCACGT	9775	False	NA	NA	False	NA	NA	NA	74198043	74061556	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74197910
tx.9811	chr18	-	4823	6	NIC	ENSMUSG00000024558.13	novel	4594	6	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	6.68131723539603	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCGTCAGGAATTGTCA	9385	False	NA	NA	False	NA	NA	NA	74198433	74061559	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74198111
tx.9812	chr18	-	1102	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	40	1463	1	-283	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGCCTTTAGGAACGT	6766	False	NA	NA	False	NA	NA	NA	74340849	74329832	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
tx.9813	chr18	-	2591	7	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAAAGGCATGGTGGC	6762	False	NA	NA	False	NA	NA	NA	74340853	74328373	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
tx.9814	chr18	-	3657	6	NIC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	1	-280	intron_retention	FALSE	canonical	3	429	junction_5	34.6040460062115	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTAGGAACGTGGG	6766	False	NA	NA	False	NA	NA	NA	74340849	74329829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_74330123_74330584_74330755_74332970_74335759_74337334_74337460_74339859_74339956_74340664
tx.9815	chr18	+	2973	16	FSM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	-112	-23	4	23	multi-exon	FALSE	canonical	3	24	junction_11	21.6794833886788	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAACAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401249	74415779	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
tx.9816	chr18	+	4524	15	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	13	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	18.2702222320409	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	74401258	74414307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
tx.9817	chr18	+	2815	15	FSM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	16	2	16	-2	multi-exon	FALSE	canonical	3	25	junction_10	20.6853245819645	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAGCATAAGGTTGCCA	NA	False	NA	NA	False	NA	NA	NA	74401261	74415801	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
tx.9818	chr18	+	5603	14	ISM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	13	1517	13	-19	5prime_fragment	FALSE	canonical	3	25	junction_10	17.696654984294	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATTTTCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74401258	74414286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587
tx.9819	chr18	+	4692	16	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	13	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	19.7033556081755	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	74401258	74414307	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
tx.982	chr1	-	6386	19	ISM	ENSMUSG00000040225.16	ENSMUST00000182593.8	9022	34	34969	-1101	-320	0	3prime_fragment	FALSE	canonical	3	53	junction_1	26.8886593194975	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	162533081	162499356	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937
tx.9820	chr18	+	1544	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	-28	0	-28	0	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	74912239	74939279	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
tx.9821	chr18	-	3786	10	FSM	ENSMUSG00000053846.6	ENSMUST00000066532.5	3787	10	1	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	1.89215404065849	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTGTCCTGTAACTCA	NA	False	NA	NA	False	NA	NA	NA	75094333	75072392	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_75074410_75076410_75076516_75078874_75079094_75080076_75080198_75081043_75081287_75082128_75082351_75087248_75087361_75088489_75088670_75090268_75090451_75093948
tx.9822	chr18	+	670	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	-2	107	-2	-106	multi-exon	FALSE	canonical	3	6761	junction_1	2088.63605148325	231	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	75133545	75136345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
tx.9823	chr18	+	905	7	NNC	ENSMUSG00000062328.9	novel	775	7	NA	NA	60	-106	at_least_one_novel_splicesite	FALSE	canonical	3	266	junction_1	4216.73927803094	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	75133607	75136345	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_75133912_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
tx.9824	chr18	+	1258	6	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	61	-102	intron_retention	FALSE	canonical	3	8261	junction_5	1519.49465283692	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGGTCTTTAATGAG	NA	False	NA	NA	False	NA	NA	NA	75133608	75136349	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
tx.9825	chr18	+	868	3	FSM	ENSMUSG00000036299.6	ENSMUST00000236421.2	524	3	-3	-341	-2	1	multi-exon	FALSE	canonical	3	91	junction_1	354	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75138936	75143005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_75138972_75141721_75141898_75142348
tx.9826	chr18	+	3611	2	FSM	ENSMUSG00000036299.6	ENSMUST00000235420.2	838	2	-2333	-440	4	1	multi-exon	FALSE	canonical	3	799	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75138943	75143005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_75141898_75142348
tx.9827	chr18	+	973	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	7	-1	6	1	multi-exon	FALSE	canonical	3	169	junction_1	315	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75138945	75143005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_75139086_75141721_75141898_75142348
tx.9828	chr18	+	1073	3	FSM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	-25	218	6	1	multi-exon	FALSE	canonical	3	388	junction_1	205.5	212	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75138945	75143005	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_75139186_75141721_75141898_75142348
tx.9829	chr18	+	2514	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	-56	-2	-52	2	multi-exon	FALSE	canonical	3	162	junction_13	17.5886149255705	305	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	75151799	75420037	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
tx.983	chr1	-	2534	5	FSM	ENSMUSG00000040124.6	ENSMUST00000045138.6	2538	5	4	0	4	0	multi-exon	FALSE	canonical	3	58	junction_3	10.1827059272082	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGTCTGTCATTTAA	NA	False	NA	NA	False	NA	NA	NA	163231234	163212476	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_163214267_163219978_163220120_163222159_163222262_163224380_163224739_163231091
tx.9830	chr18	-	207	2	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCACCAGATATGTCCAG	NA	False	NA	NA	False	NA	NA	NA	75444319	75443228	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Intergenic_chr18_-_75443381_75444264
tx.9831	chr18	+	4438	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	-167	7	-167	-7	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	253	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCATCCCTTGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	75500432	75528999	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
tx.9832	chr18	+	4365	3	FSM	ENSMUSG00000025880.12	ENSMUST00000174843.8	793	3	-1626	-1946	-165	-3	multi-exon	FALSE	canonical	3	56	junction_2	848	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCCTTGTTGTTCAGAG	NA	False	NA	NA	False	NA	NA	NA	75500434	75529003	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_75502640_75503965_75504020_75526897
tx.9833	chr18	+	3873	3	FSM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	-24	-1702	-24	-416	multi-exon	FALSE	canonical	0	0	junction_1	1	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTAGTTCTTTTTGTCG	NA	False	NA	NA	False	NA	NA	NA	76192504	76281216	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_76192689_76269897_76271122_76278751
tx.9834	chr18	+	2771	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	81	5237	-40	432	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGACCTTTTGCCTCATT	NA	False	NA	NA	False	NA	NA	NA	76374731	76438797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
tx.9835	chr18	+	2656	10	FSM	ENSMUSG00000024563.17	ENSMUST00000091831.13	1645	10	-15	-996	-15	432	multi-exon	FALSE	canonical	3	36	junction_2	75.1282031834933	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGACCTTTTGCCTCATT	NA	False	NA	NA	False	NA	NA	NA	76374756	76438797	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
tx.9836	chr18	+	8135	12	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	18	783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	78.3213342899537	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGGATCCAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	76374789	76444817	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677_76440877_76441474
tx.9837	chr18	+	1380	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	22	0	-6	0	multi-exon	FALSE	canonical	3	1641	junction_2	78	538	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTCTGATTTATGCCTT	NA	False	NA	NA	False	NA	NA	NA	77017734	77029308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_77017913_77027263_77027366_77028208
tx.9838	chr18	+	1523	4	FSM	ENSMUSG00000090000.3	ENSMUST00000136800.2	1503	4	-13	-7	-13	0	multi-exon	FALSE	canonical	3	14	junction_2	763.929461548789	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTCTGATTTATGCCTT	NA	False	NA	NA	False	NA	NA	NA	77017727	77029308	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_77017913_77018319_77018456_77027263_77027366_77028208
tx.9839	chr18	+	1546	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	25	3906	-10	-4	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTTTTAATTAGACAT	NA	False	NA	NA	False	NA	NA	NA	77031812	77059097	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
tx.984	chr1	+	3886	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	55	5	55	-5	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	285	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTCCAACTCTCATTT	NA	False	NA	NA	False	NA	NA	NA	163607206	163744673	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
tx.9840	chr18	-	1593	6	NNC	ENSMUSG00000025420.14	novel	1674	14	NA	NA	13996	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	3.26190128606002	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGCTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	77120943	77097734	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
tx.9841	chr18	+	4766	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26796	1703	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	341.46650267483	40	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTTTTTAAGTAAG	6289	False	NA	NA	False	NA	NA	NA	77126107	77243199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
tx.9842	chr18	+	2275	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-9	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	276	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAACTTAACTATGTAGC	6434	False	NA	-88	True	NA	NA	NA	77126252	77234624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
tx.9843	chr18	+	4975	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	1702	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	629	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTTTTTAAGTAA	6434	False	NA	-88	True	NA	NA	NA	77126252	77243198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
tx.9844	chr18	+	2047	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	15	-9	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAACTTAACTATGTAGC	7914	False	NA	NA	False	NA	NA	NA	77152918	77234624	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
tx.9845	chr18	+	4757	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	6	-1703	6	1703	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTTTTTAAGTAAG	7905	False	NA	NA	False	NA	NA	NA	77152909	77243199	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
tx.9846	chr18	+	4710	13	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	32087	-1908	31476	1908	3prime_fragment	FALSE	canonical	3	706	junction_11	225.054607570894	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGTCTGACATTGAT	7905	False	NA	NA	False	NA	NA	NA	77184990	77243404	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
tx.9847	chr18	-	1941	8	FSM	ENSMUSG00000025427.16	ENSMUST00000026494.14	7300	8	-208	5567	-183	1216	multi-exon	FALSE	canonical	3	20	junction_2	6.65168384389875	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAATCAAAGGTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	77653040	77549372	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_77550146_77550579_77550687_77554372_77554469_77554630_77554736_77555936_77556067_77563169_77563281_77571844_77572161_77652737
tx.9848	chr18	-	4689	3	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	39314	6	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	22.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTCTGAGAATGTT	5459	False	NA	NA	False	NA	NA	NA	77762319	77719186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_77723025_77730763_77730891_77761595
tx.9849	chr18	-	5191	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	-60	-6	-10	6	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTCTGAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	77801693	77719186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
tx.985	chr1	+	4414	14	NIC	ENSMUSG00000026584.15	novel	4336	14	NA	NA	-9	-7	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	25.1002722821696	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGTACAATGGTTACA	NA	False	NA	NA	False	NA	NA	NA	163757349	163782671	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
tx.9850	chr18	-	5023	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-10	6	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTCTGAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	77801693	77719186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
tx.9851	chr18	-	4936	4	NIC	ENSMUSG00000047466.11	novel	1606	5	NA	NA	0	8	intron_retention	FALSE	canonical	3	34	junction_3	66.9178600972864	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTCTGAGAATGTTTT	NA	False	NA	NA	False	NA	NA	NA	77802186	77719184	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77802002
tx.9852	chr18	-	5102	5	FSM	ENSMUSG00000047466.11	ENSMUST00000237203.2	1606	5	0	-3496	0	6	multi-exon	FALSE	canonical	3	34	junction_4	65.6291665343999	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTCTGAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	77802186	77719186	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77802002
tx.9853	chr18	-	999	9	FSM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	4	0	4	0	multi-exon	FALSE	canonical	3	1190	junction_6	88.5180066427165	335	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	77855476	77845267	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
tx.9854	chr18	+	2201	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	267	3	4	0	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	5906	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	NA	False	NA	NA	NA	77861695	77870566	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
tx.9855	chr18	+	3005	15	NIC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	5	876	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	7.97860659923186	26	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAATTTGTATTCTTGT	2215	False	NA	NA	False	NA	NA	NA	77877618	77971455	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_77877687_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
tx.9856	chr18	+	3321	17	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	2	878	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.3493659226061	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTATTCTTGTGT	2212	False	NA	NA	False	NA	NA	NA	77877615	77971457	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_77877687_77882004_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
tx.9857	chr18	+	2669	9	ISM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	75691	-881	75691	881	3prime_fragment	FALSE	canonical	3	30	junction_2	5.23061898822692	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTATTCTTGTGTTAG	9084	False	NA	NA	False	NA	NA	NA	77957935	77971460	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
tx.9858	chr18	+	9732	44	FSM	ENSMUSG00000039840.9	ENSMUST00000044622.7	9660	44	-60	-12	-60	12	multi-exon	FALSE	canonical	2	14	junction_24	5.20286146671814	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAGGCTAATGTAGAT	NA	False	NA	NA	False	NA	NA	NA	77981619	78078240	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_77981775_77991364_77992298_77994363_77994608_77997375_77997513_77997947_77998056_77999121_77999196_78000621_78000728_78002244_78002360_78002694_78002846_78003921_78004078_78005595_78005754_78008115_78008271_78011751_78011893_78015709_78015875_78018193_78018314_78019051_78019309_78022338_78022480_78024155_78024301_78024512_78024711_78025522_78025634_78026685_78026806_78028255_78028423_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139
tx.9859	chr18	+	3163	3	FSM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	-14	-2	-14	2	multi-exon	FALSE	canonical	3	46	junction_2	5.5	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCGTGTGTTATTGATA	NA	False	NA	NA	False	NA	NA	NA	80090090	80162856	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_80090358_80123039_80123263_80160183
tx.986	chr1	+	4275	14	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	22.8377347864782	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGTTACAATTATTTC	NA	False	NA	NA	False	NA	NA	NA	163757349	163782679	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
tx.9860	chr18	-	4991	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	-11	32	-11	-32	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	346	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGTTCAATTCTTGT	5925	False	NA	NA	False	NA	NA	NA	80194708	80169557	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
tx.9861	chr18	-	1373	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	6	-2	6	2	multi-exon	FALSE	canonical	3	236	junction_3	30.0026665481587	208	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGTGTATACGCACAA	NA	False	NA	NA	False	NA	NA	NA	80243867	80235477	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
tx.9862	chr18	+	731	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	24	3323	24	194	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	402	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTGCTTACTGCGT	NA	False	NA	NA	False	NA	NA	NA	80250033	80265747	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
tx.9863	chr18	+	1663	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	22	-2	-10	2	multi-exon	FALSE	canonical	3	1096	junction_3	900.996608699993	906	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACGTTTGTTGTGGGAA	NA	False	NA	NA	False	NA	NA	NA	80250034	80255949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
tx.9864	chr18	+	3887	5	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	20	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	1173.71610707189	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGTCATGATGTTT	NA	False	NA	NA	False	NA	NA	NA	80250029	80269069	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393_80266876_80267045
tx.9865	chr18	-	1140	4	FSM	ENSMUSG00000078963.4	ENSMUST00000237192.2	1104	4	-29	-7	-29	7	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGTGTATGGAGGTTT	NA	False	NA	NA	False	NA	NA	NA	80280077	80272965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_80273777_80276629_80276725_80278663_80278731_80279910
tx.9866	chr18	+	1895	5	FSM	ENSMUSG00000034006.18	ENSMUST00000129043.8	1864	5	-31	0	-31	0	multi-exon	FALSE	canonical	3	16	junction_1	11.0989864402116	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCATGTGGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	80299467	80335931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_80299534_80299996_80300334_80306634_80306769_80326490_80326708_80334790
tx.9867	chr18	+	1961	5	FSM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	-40	-10	-6	-2	multi-exon	FALSE	canonical	3	25	junction_3	7.26291952316697	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGGTGTAAGTAAGTC	NA	False	NA	NA	False	NA	NA	NA	80299492	80335937	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80326490_80326708_80334790
tx.9868	chr18	+	2021	6	FSM	ENSMUSG00000034006.18	ENSMUST00000091798.10	1989	6	-40	8	-18	0	multi-exon	FALSE	canonical	3	12	junction_3	14.1279864099595	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCATGTGGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	80299480	80335931	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
tx.9869	chr18	-	3859	14	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	63.2426528230329	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTCTCTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	80512900	80451177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_-_80451997_80463657_80463846_80477380_80477544_80485226_80485387_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
tx.987	chr1	+	4306	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	47	15	7	1	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGTTACAATTATTTCT	NA	False	NA	NA	False	NA	NA	NA	163757380	163782680	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
tx.9870	chr18	-	3706	13	FSM	ENSMUSG00000033323.15	ENSMUST00000036229.13	3713	13	3	4	3	2	multi-exon	FALSE	canonical	3	130	junction_8	21.1126278694898	354	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTCTCTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	80512907	80451177	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
tx.9871	chr18	-	4350	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_21	27.8299263581022	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9764	False	NA	NA	False	NA	NA	NA	80977255	80778291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
tx.9872	chr18	-	4491	30	FSM	ENSMUSG00000024566.11	ENSMUST00000091790.5	5357	30	-69	935	-4	-1	multi-exon	FALSE	canonical	3	35	junction_1	27.0288523341592	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTGACCTGAGCGCC	9752	False	NA	NA	False	NA	NA	NA	80977267	80778290	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
tx.9873	chr18	-	5095	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	102	junction_23	15.0636509600732	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9755	False	NA	NA	False	NA	NA	NA	80977264	80778291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
tx.9874	chr18	-	4455	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	8	687	-2	-2	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9754	False	NA	NA	False	NA	NA	NA	80977265	80778291	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
tx.9875	chr18	-	4040	2	ISM	ENSMUSG00000024565.11	ENSMUST00000235746.2	4254	3	2727	-2297	2727	-613	intron_retention	FALSE	canonical	3	49	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTCCCTGATTCTTCC	NA	False	NA	NA	False	NA	NA	NA	81015519	81010203	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_81013120_81014395
tx.9876	chr18	-	5704	3	FSM	ENSMUSG00000024565.11	ENSMUST00000235746.2	4254	3	839	-2289	839	-621	multi-exon	FALSE	canonical	3	26	junction_2	11.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAATCGTGTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	81017407	81010211	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_81013120_81014395_81014737_81014952
tx.9877	chr18	-	6375	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	82	622	82	-622	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAATCGTGTTCCCT	NA	False	NA	NA	False	NA	NA	NA	81029904	81010212	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
tx.9878	chr18	-	6587	3	FSM	ENSMUSG00000024565.11	ENSMUST00000238808.2	4214	3	-144	-2229	91	-617	multi-exon	FALSE	canonical	3	38	junction_2	5.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCGTGTTCCCTGATTC	NA	False	NA	NA	False	NA	NA	NA	81029895	81010207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_81013120_81014395_81017845_81029669
tx.9879	chr18	+	4750	4	FSM	ENSMUSG00000041607.18	ENSMUST00000091789.11	4797	4	30	17	14	-17	multi-exon	FALSE	canonical	3	13	junction_1	4.02768199119819	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGTGTACTAATTGCACA	NA	False	NA	NA	False	NA	NA	NA	82493300	82576811	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_82493520_82518851_82518928_82540174_82540263_82572444
tx.988	chr1	+	4130	14	FSM	ENSMUSG00000026584.15	ENSMUST00000162234.2	4336	14	209	-3	209	2	multi-exon	FALSE	canonical	3	18	junction_6	30.7224644598249	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTACAATTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	163757582	163782681	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
tx.9880	chr18	-	7878	31	NIC	ENSMUSG00000041258.19	novel	6059	31	NA	NA	-11	17	combination_of_known_junctions	FALSE	canonical	1	2	junction_23	19.3459728798183	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTATGTGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	82711019	82613583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444_82657706_82658224_82658367_82662181_82662386_82664093_82664367_82675073_82675266_82676127_82676332_82682962_82683107_82686696_82686870_82689810_82689936_82692431_82692611_82698716_82698882_82700269_82700413_82710767
tx.9881	chr18	-	7915	31	FSM	ENSMUSG00000041258.19	ENSMUST00000182122.8	6059	31	-160	-1696	-11	17	multi-exon	FALSE	canonical	1	4	junction_23	19.2837294687055	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTATGTGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	82711019	82613583	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444_82657706_82658224_82658367_82662181_82662386_82664093_82664367_82675073_82675303_82676127_82676332_82682962_82683107_82686696_82686870_82689810_82689936_82692431_82692611_82698716_82698882_82700269_82700413_82710767
tx.9882	chr18	+	4801	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15746	-1301	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	87.4885706821183	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCGCTCACTCTGTG	NA	False	NA	NA	False	NA	NA	NA	82990186	83022138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_82990604_83004868_83006324_83011194_83011315_83012594_83012663_83019397
tx.9883	chr18	+	5584	4	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	-54	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	94.6232294711798	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTTGTAAGACATTTAC	NA	False	NA	NA	False	NA	NA	NA	82990900	83023385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_82990974_83004868_83006324_83012594_83012663_83019397
tx.9884	chr18	+	5712	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	-46	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	391	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACATTTACCCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	82990900	83023393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
tx.9885	chr18	+	5477	3	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	-93	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	87	35	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTCTATTGGAATTT	NA	False	NA	NA	False	NA	NA	NA	82990900	83023346	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr18_+_82990974_83004868_83006324_83019397
tx.9886	chr18	+	5486	4	ISM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	72265	46	-911	-46	3prime_fragment	FALSE	canonical	3	187	junction_1	11.7851130197758	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACATTTACCCCTCTTT	7937	False	NA	NA	False	NA	NA	NA	83005021	83023393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_83006324_83011194_83011315_83012594_83012663_83019397
tx.9887	chr18	+	4189	3	ISM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	78436	43	5260	-43	3prime_fragment	FALSE	canonical	3	212	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTACCCCTCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	83011192	83023396	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_+_83011315_83012594_83012663_83019397
tx.9888	chr18	+	3833	2	FSM	ENSMUSG00000049090.4	ENSMUST00000235383.2	1789	2	-604	-1440	4	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACACTTCTTTCTGTCCC	4258	False	NA	NA	False	NA	NA	NA	84106191	84115653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_84106906_84112534
tx.9889	chr18	+	3424	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	6	0	6	0	multi-exon	FALSE	canonical	3	35	junction_1	0	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACACTTCTTTCTGTCCC	4260	False	NA	NA	False	NA	NA	NA	84106193	84115653	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_84106499_84112534
tx.989	chr1	-	2922	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	5	252	5	-252	multi-exon	TRUE	canonical	2	170	junction_8	40.7878461455702	349	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	NA	NA	NA	163822360	163781574	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
tx.9890	chr18	-	7907	9	FSM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	-1	3	-1	-3	multi-exon	FALSE	canonical	3	22	junction_4	5.699506557589	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGGTGGTGTACTAAG	NA	False	NA	NA	False	NA	NA	NA	84607630	84225828	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84576451_84581172_84607562
tx.9891	chr18	-	5164	2	ISM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	35	350214	35	-5006	5prime_fragment	FALSE	canonical	3	30	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCTGAAATTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	84607594	84576039	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr18_-_84581172_84607562
tx.9892	chr18	-	2021	11	FSM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	131	0	131	0	multi-exon	FALSE	canonical	3	554	junction_9	38.6638073655454	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	NA	False	NA	NA	NA	84700053	84685593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962
tx.9893	chr18	-	2070	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	50	4	-25	0	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	525	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	NA	False	NA	NA	NA	84703777	84685593	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
tx.9894	chr18	+	802	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	24	7	-15	0	multi-exon	FALSE	canonical	3	946	junction_4	54.2425110038243	301	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATATGTGTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	84869486	84897989	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
tx.9895	chr18	+	2065	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	-155	0	-155	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	707	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	645	False	NA	NA	False	NA	NA	NA	84952751	84999598	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
tx.9896	chr18	-	1318	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	5	1095	5	1	multi-exon	FALSE	canonical	3	52	junction_4	6.15142259969188	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTAAAAGCATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	84969644	84965410	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
tx.9897	chr18	-	3009	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-16	3043	1	-38	multi-exon	FALSE	canonical	3	70	junction_1	76	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAGGTTATTTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	88912462	88886335	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_88889043_88905332_88905458_88912285
tx.9898	chr18	-	3074	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	14	-274	1	-47	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	233	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCTGAATAGAAAGGTTA	NA	False	NA	NA	False	NA	NA	NA	88912462	88886344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
tx.9899	chr18	+	7289	49	FSM	ENSMUSG00000023066.11	ENSMUST00000023828.9	7271	49	-20	2	-20	1	multi-exon	TRUE	canonical	3	17	junction_17	5.75166038828982	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAAAAGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	88989893	89149138	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
tx.99	chr1	-	6295	23	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_21	15.3859439985746	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACATTTGTAATGCTTG	NA	False	NA	NA	False	NA	NA	NA	24139420	24050175	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
tx.990	chr1	+	1419	2	FSM	ENSMUSG00000041396.14	ENSMUST00000111490.2	1419	2	-2	2	-2	-2	multi-exon	FALSE	canonical	3	75	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGACTGTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	163822455	163824810	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_163822547_163823482
tx.9900	chr18	+	4544	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	54	13	4	-13	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	343	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATTGCATAATTGCTAC	4796	False	NA	NA	False	NA	NA	NA	90528331	90561378	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
tx.9901	chr18	+	4488	15	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	16	-11	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	55.6583968764565	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCATAATTGCTACCT	4808	False	NA	NA	False	NA	NA	NA	90528343	90561380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
tx.9902	chr18	+	4334	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	10	-2341	-9	2335	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATCCAAGTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	90597910	90612987	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
tx.9903	chr19	-	3690	15	FSM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	31	1848	-6	0	multi-exon	FALSE	canonical	3	43	junction_2	8.84936294259626	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTTGTGTTGGAGGT	NA	False	NA	NA	False	NA	NA	NA	3332986	3310923	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
tx.9904	chr19	+	810	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	-11	3	-6	3	multi-exon	FALSE	canonical	3	1715	junction_6	72.3058703625708	460	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTGACTTGCTGTT	7360	False	NA	NA	False	NA	NA	NA	3333048	3341198	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
tx.9905	chr19	+	4288	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	29	0	29	0	multi-exon	TRUE	canonical	3	230	junction_1	37.3718386086055	725	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCTGTCCCTGTCTCC	NA	False	NA	NA	False	NA	NA	NA	3373313	3435733	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
tx.9906	chr19	+	2183	9	FSM	ENSMUSG00000024905.16	ENSMUST00000025840.16	2234	9	13	38	13	0	multi-exon	FALSE	canonical	1	2	junction_6	4.715334028465	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTTAGTAGCTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	3438869	3457785	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3439334_3442102_3442262_3443924_3444046_3445919_3445994_3446962_3447055_3452485_3452577_3454048_3454187_3454932_3455109_3456917
tx.9907	chr19	-	859	6	FSM	ENSMUSG00000024907.8	ENSMUST00000237521.2	788	6	-71	0	-71	0	multi-exon	FALSE	canonical	1	1	junction_2	1.72046505340853	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGACTGTTTGGTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	3464615	3459914	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_3460166_3461128_3461207_3461557_3461648_3463294_3463350_3464031_3464113_3464311
tx.9908	chr19	-	4909	24	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	100.351876189837	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	3625752	3504927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
tx.9909	chr19	-	4860	23	FSM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	-19	0	-2	0	multi-exon	FALSE	canonical	3	106	junction_9	88.0225482945391	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	3625739	3504927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
tx.991	chr1	+	1512	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	1	0	1	0	multi-exon	FALSE	canonical	3	49	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTGTTCAATTTCT	NA	False	NA	NA	False	NA	NA	NA	163822458	163824812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_163822641_163823482
tx.9910	chr19	-	4799	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_22	86.8173369782787	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	3625739	3504927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
tx.9911	chr19	-	4957	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	0	-5	0	0	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	311	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	3625749	3504927	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
tx.9912	chr19	-	5171	23	FSM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	-12	2	-4	1	multi-exon	FALSE	canonical	2	72	junction_10	15.3130555220533	180	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCATTCCTTTGTGC	7815	False	NA	NA	False	NA	NA	NA	3736568	3634829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
tx.9913	chr19	-	4002	18	ISM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	56117	2	-14647	1	3prime_fragment	TRUE	canonical	2	72	junction_10	15.6326780443202	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCATTCCTTTGTGC	6128	False	NA	NA	False	NA	NA	NA	3680439	3634829	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073
tx.9914	chr19	+	2272	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237955.2	2193	4	-72	-7	6	0	multi-exon	FALSE	canonical	3	38	junction_1	122.806984962402	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	3758298	3767880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3758437_3764046_3764626_3765637_3765803_3766490
tx.9915	chr19	+	1914	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	-33	1	7	0	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	3758299	3767880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
tx.9916	chr19	+	1910	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237320.2	772	4	8	-1146	8	0	multi-exon	FALSE	canonical	3	113	junction_1	87.4541149530554	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	3758300	3767880	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3758437_3764406_3764626_3765637_3765803_3766490
tx.9917	chr19	+	3568	2	ISM	ENSMUSG00000035372.3	ENSMUST00000235295.2	1643	3	5279	-3	5213	0	3prime_fragment	FALSE	canonical	3	297	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGGGTCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	3763625	3767881	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_3765803_3766490
tx.9918	chr19	-	199	2	Antisense	novelGene_ENSMUSG00000045098.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	588	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAACTTGGGAAGGTGT	NA	False	NA	NA	False	NA	NA	NA	3821401	3811868	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	Antisense_chr19_-_3812018_3821351
tx.9919	chr19	+	5552	9	NNC	ENSMUSG00000045098.20	novel	3933	10	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	121.730234535221	9	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTCAGTGTTCACTG	NA	False	NA	NA	False	NA	NA	NA	3818155	3868301	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
tx.992	chr1	+	3507	6	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-29	-4	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	109.757186552863	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTCCCTTTTCACTC	NA	False	NA	NA	False	NA	NA	NA	164076585	164092934	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr1_+_164077026_164084388_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
tx.9920	chr19	+	5927	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-124	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	110.367386487132	16	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGTCAGTGTTCACT	NA	False	NA	NA	False	NA	NA	NA	3817908	3868300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
tx.9921	chr19	+	5656	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	100.208055170169	86	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGTCAGTGTTCACT	NA	False	NA	NA	False	NA	NA	NA	3818119	3868300	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
tx.9922	chr19	+	2849	9	NNC	ENSMUSG00000045098.20	novel	2975	10	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_7	94.9986842014141	70	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTCTTGAGTCTGG	NA	False	NA	NA	False	NA	NA	NA	3818154	3858835	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
tx.9923	chr19	+	2529	8	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	2	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	99.3606089566932	87	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGGTGGTGTACTCC	NA	False	NA	NA	False	NA	NA	NA	3818150	3856340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
tx.9924	chr19	+	2588	9	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	7	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	118.906935773318	11	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGTGTACTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	3818155	3856344	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
tx.9925	chr19	+	2626	12	FSM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	-303	-4	0	1	multi-exon	FALSE	canonical	3	76	junction_2	51.157187679149	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	5720	False	NA	NA	False	NA	NA	NA	3901772	3944368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3902414_3914647_3914760_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
tx.9926	chr19	+	2571	11	FSM	ENSMUSG00000024843.16	ENSMUST00000072055.13	2549	11	-23	1	1	1	multi-exon	FALSE	canonical	3	55	junction_2	49.9220392211696	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	5721	False	NA	NA	False	NA	NA	NA	3901773	3944368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3902414_3914647_3914760_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
tx.9927	chr19	+	2696	13	FSM	ENSMUSG00000024843.16	ENSMUST00000128694.8	2683	13	-10	-3	-10	1	multi-exon	FALSE	canonical	3	10	junction_2	76.2468123195251	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	5710	False	NA	NA	False	NA	NA	NA	3901762	3944368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
tx.9928	chr19	+	6792	11	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-3728	0	intron_retention	FALSE	canonical	3	16	junction_1	75.6357058537831	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCAGACTGTTACCCT	7885	False	NA	NA	False	NA	NA	NA	3920935	3944365	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
tx.9929	chr19	+	5830	10	ISM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	19702	-4	-2886	1	3prime_fragment	FALSE	canonical	3	87	junction_1	43.04892422051	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	8727	False	NA	NA	False	NA	NA	NA	3921777	3944368	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
tx.993	chr1	+	3940	5	NIC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	256	junction_3	15.9216833280907	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	NA	False	NA	NA	NA	164076609	164092938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164090331_164090958
tx.9930	chr19	-	2661	20	FSM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	27	0	6	0	multi-exon	FALSE	canonical	3	39	junction_12	8.58007741992203	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	3957106	3946049	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
tx.9931	chr19	-	767	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	14	-1	8	1	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	389	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTGTTGTGTTGTTCCA	NA	False	NA	NA	False	NA	NA	NA	3962760	3958865	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
tx.9932	chr19	-	1954	10	NNC	ENSMUSG00000024885.10	novel	1924	10	NA	NA	-1050	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	2.58198889747161	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACAGGTGTCTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	3980858	3963490	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3980715
tx.9933	chr19	-	1833	10	FSM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	48	43	-33	-43	multi-exon	FALSE	canonical	2	3	junction_9	3.58322566591047	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATCGTCGTGGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	3979760	3963533	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3979695
tx.9934	chr19	+	2089	10	NIC	ENSMUSG00000036908.18	novel	2266	11	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	7.99691298464293	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGTAGGTTGTGTTCT	5200	False	NA	NA	False	NA	NA	NA	3985200	3999340	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_3985353_3985761_3985904_3986268_3986423_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
tx.9935	chr19	+	2287	11	FSM	ENSMUSG00000036908.18	ENSMUST00000162708.7	2266	11	-24	3	-24	-2	multi-exon	FALSE	canonical	2	7	junction_5	6.90579466824782	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGGGTGTAGGTTGTGT	5161	False	NA	NA	False	NA	NA	NA	3985161	3999337	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_3985353_3985761_3985904_3986268_3986423_3991519_3991682_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
tx.9936	chr19	+	1946	10	FSM	ENSMUSG00000075296.6	ENSMUST00000143380.3	2142	10	135	61	135	-61	multi-exon	TRUE	canonical	1	2	junction_3	1.85259244450367	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCTCAGTGTGTTCATT	NA	False	NA	NA	False	NA	NA	NA	4022462	4031585	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4022614_4027498_4027662_4028060_4028172_4028413_4028535_4028652_4028739_4028850_4028933_4029229_4029617_4030005_4030173_4030691_4030792_4031007
tx.9937	chr19	+	1329	8	FSM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	-43	-2	-43	0	multi-exon	FALSE	canonical	3	15	junction_1	10.3332236114429	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACAGTTCTTGTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	4036526	4040007	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4036612_4036822_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
tx.9938	chr19	+	963	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	-176	0	-176	0	multi-exon	FALSE	canonical	3	59	junction_1	10.4243305140746	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	3337	False	NA	NA	False	NA	NA	NA	4050403	4052103	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
tx.9939	chr19	+	1350	3	FSM	ENSMUSG00000110949.2	ENSMUST00000122924.2	1082	3	-267	-1	-216	1	multi-exon	FALSE	canonical	3	76	junction_1	4	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGGCATCTTCCGTG	3297	False	NA	NA	False	NA	NA	NA	4050363	4052102	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4051329_4051627_4051706_4051795
tx.994	chr1	+	3559	6	FSM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	-4	16	-4	0	multi-exon	FALSE	canonical	3	256	junction_3	19.417517864032	469	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	NA	False	NA	NA	NA	164076610	164092938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
tx.9940	chr19	-	1553	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	104	4	2	1	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	996	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6530	False	NA	NA	False	NA	NA	NA	4062702	4057500	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
tx.9941	chr19	-	761	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	60	0	0	0	multi-exon	FALSE	canonical	3	1999	junction_6	828.939215034626	487	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	4087925	4085406	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
tx.9942	chr19	-	777	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	18	2	18	0	multi-exon	FALSE	canonical	3	1174	junction_6	961.706469424706	296	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	NA	NA	NA	4092245	4090286	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
tx.9943	chr19	+	912	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	165	3	-54	-3	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCCTTTCTGTGTGTG	7041	False	NA	NA	False	NA	NA	NA	4147346	4149014	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
tx.9944	chr19	+	1097	4	FSM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	-15	7	-15	2	multi-exon	TRUE	canonical	3	90	junction_1	272.960721635102	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCAGCCTTTCTGTGTG	7080	False	NA	NA	False	NA	NA	NA	4147385	4149012	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4147734_4147816_4147918_4148004_4148138_4148497
tx.9945	chr19	+	4192	24	FSM	ENSMUSG00000024851.15	ENSMUST00000049658.14	4206	24	14	0	14	0	multi-exon	FALSE	canonical	1	1	junction_9	2.52323793539946	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGGCCTTCCTGTCTGG	1321	False	NA	NA	False	NA	NA	NA	4150011	4163965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4150214_4151143_4151263_4152672_4152888_4152974_4153097_4153260_4153486_4154813_4155141_4155229_4155326_4155414_4155523_4156563_4156626_4156711_4156963_4157785_4157976_4158085_4158194_4158422_4158581_4158664_4158868_4159825_4159997_4160494_4160660_4160841_4160991_4161078_4161190_4161581_4161699_4161865_4162015_4162100_4162251_4162326_4162511_4162747_4162877_4163484
tx.9946	chr19	+	5001	23	FSM	ENSMUSG00000024851.15	ENSMUST00000151957.8	4981	23	-20	0	-20	0	multi-exon	FALSE	canonical	1	1	junction_9	2.56526382900408	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGGCCTTCCTGTCTGG	1335	False	NA	NA	False	NA	NA	NA	4150025	4163965	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4150214_4151143_4151263_4152672_4152888_4152974_4153097_4153260_4153486_4154813_4155141_4155229_4155326_4155414_4155523_4156563_4156626_4156711_4157976_4158085_4158194_4158422_4158581_4158664_4158868_4159825_4159997_4160494_4160660_4160841_4160991_4161078_4161190_4161581_4161699_4161865_4162015_4162100_4162251_4162326_4162511_4162747_4162877_4163484
tx.9947	chr19	-	1316	7	FSM	ENSMUSG00000024847.16	ENSMUST00000117831.8	1378	7	58	4	-10	-4	multi-exon	FALSE	canonical	2	3	junction_6	105.801307490346	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATCTATCTTGAAGGCTG	9674	False	NA	NA	False	NA	NA	NA	4175800	4164449	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335_4171546_4175729
tx.9948	chr19	-	1243	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	23	-5	23	5	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAACTAATCTATCT	3925	False	NA	NA	False	NA	NA	NA	4171552	4164458	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
tx.9949	chr19	+	891	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	4	577	4	-2	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACAGTTGCACTTTCCT	4375	False	NA	NA	False	NA	NA	NA	4175963	4181729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
tx.995	chr1	+	3439	6	FSM	ENSMUSG00000040918.13	ENSMUST00000159230.8	3432	6	-7	0	2	0	multi-exon	FALSE	canonical	3	46	junction_2	97.8296478578963	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	NA	False	NA	NA	NA	164076616	164092938	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164089809_164090188_164090331_164090958
tx.9950	chr19	+	936	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	5	-3	4	-2	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACAGTTGCACTTTCCT	4375	False	NA	NA	False	NA	NA	NA	4175963	4181729	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
tx.9951	chr19	+	1565	5	FSM	ENSMUSG00000024845.20	ENSMUST00000139718.10	1012	5	5	-558	4	-1	multi-exon	FALSE	canonical	3	226	junction_3	207.505421615918	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACAAAACCGAGAATCTT	4375	False	NA	NA	False	NA	NA	NA	4175963	4182283	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181227_4181282_4181360
tx.9952	chr19	+	1852	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-7	1	combination_of_known_junctions	TRUE	canonical	3	402	junction_1	75.9439925208044	627	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGACCTACTGTTGTG	3603	False	NA	NA	False	NA	NA	NA	4198645	4204033	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
tx.9953	chr19	-	1894	14	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	1	23	intron_retention	FALSE	canonical	3	79	junction_5	10.8698595277881	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAAGAGTGGCATGTTT	2774	False	NA	NA	False	NA	NA	NA	4213328	4206767	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
tx.9954	chr19	-	2010	15	FSM	ENSMUSG00000024830.18	ENSMUST00000130469.8	1979	15	-31	0	-1	0	multi-exon	FALSE	canonical	1	2	junction_9	32.5877935079116	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2772	False	NA	NA	False	NA	NA	NA	4213330	4206793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4209564_4209705_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
tx.9955	chr19	-	1760	15	FSM	ENSMUSG00000024830.18	ENSMUST00000025749.15	4586	15	25	2801	1	0	multi-exon	FALSE	canonical	2	38	junction_6	17.8245416691225	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGCTTTTGCCGGACTC	2774	False	NA	NA	False	NA	NA	NA	4213328	4206790	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
tx.9956	chr19	-	876	6	ISM	ENSMUSG00000024830.18	ENSMUST00000135911.8	1143	11	3612	-191	-566	0	3prime_fragment	FALSE	canonical	3	79	junction_5	15.0066651858433	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	7385	False	NA	NA	False	NA	NA	NA	4208717	4206793	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608
tx.9957	chr19	+	1395	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	78	0	-16	0	multi-exon	TRUE	canonical	3	3675	junction_3	183.825475806689	2672	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3355	False	NA	NA	False	NA	NA	NA	4242141	4245419	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
tx.9958	chr19	-	2089	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	-8	0	-8	0	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	346	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5990	False	NA	NA	False	NA	NA	NA	4251643	4245194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
tx.9959	chr19	-	2190	10	FSM	ENSMUSG00000024824.8	ENSMUST00000237467.2	2101	10	-65	-24	-10	0	multi-exon	FALSE	canonical	3	364	junction_3	31.4889751429854	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5962	False	NA	NA	False	NA	NA	NA	4251671	4245194	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
tx.996	chr1	+	1902	6	FSM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	5	2	5	-2	multi-exon	FALSE	canonical	2	28	junction_1	8.97552226892675	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGGTGTCATCTTGT	NA	False	NA	NA	False	NA	NA	NA	164103158	164115414	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809_164113965_164115075
tx.9960	chr19	+	906	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	5	2	5	1	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACCTTACATCTCT	NA	False	NA	NA	False	NA	NA	NA	4281957	4283686	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
tx.9961	chr19	-	2140	15	FSM	ENSMUSG00000005986.17	ENSMUST00000056888.13	2139	15	-1	0	-1	0	multi-exon	FALSE	canonical	2	3	junction_3	4.70128076340124	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGCTGTCCTGCGTGGT	859	False	NA	NA	False	NA	NA	NA	4333164	4320207	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
tx.9962	chr19	-	3472	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	-96	0	-96	0	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	349	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	NA	False	NA	NA	NA	4356346	4336029	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
tx.9963	chr19	-	5343	10	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-21	26	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	36.3402983470227	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	4150	False	NA	NA	False	NA	NA	NA	4384050	4366171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
tx.9964	chr19	-	7279	21	FSM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	-11	-26	7	26	multi-exon	FALSE	canonical	3	58	junction_20	26.1194850638369	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	NA	False	NA	NA	NA	4447116	4366171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
tx.9965	chr19	-	7166	21	FSM	ENSMUSG00000054611.18	ENSMUST00000047898.14	8578	21	-313	1725	-313	26	multi-exon	FALSE	canonical	3	19	junction_20	31.2315545562497	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	NA	False	NA	NA	NA	4448626	4366171	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
tx.9966	chr19	-	5055	12	ISM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	1	23926	1	1254	5prime_fragment	FALSE	canonical	3	58	junction_11	21.4707180955177	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTTGTTTAACTTGAAT	NA	False	NA	NA	False	NA	NA	NA	4447104	4390123	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
tx.9967	chr19	-	1122	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	14	208	3	0	multi-exon	FALSE	canonical	3	9	junction_1	4.02336923485777	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	9162	False	NA	NA	False	NA	NA	NA	4489446	4475694	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
tx.9968	chr19	+	4040	21	FSM	ENSMUSG00000024892.18	ENSMUST00000224726.3	4061	21	19	2	19	-2	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGTCATGTACAGTCT	1720	False	NA	NA	False	NA	NA	NA	4560532	4671705	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
tx.9969	chr19	-	3007	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	-89	0	-89	0	multi-exon	FALSE	canonical	3	22	junction_2	18.5	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGGTTTTTCGTCTCA	NA	False	NA	NA	False	NA	NA	NA	4665784	4661812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4662667_4663183_4664543_4664990
tx.997	chr1	-	2644	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	4	-218	-1	218	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	164135054	164118739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
tx.9970	chr19	-	3467	2	FSM	ENSMUSG00000045045.8	ENSMUST00000053597.3	3194	2	-266	-7	-101	0	multi-exon	FALSE	canonical	3	59	junction_1	0	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGGTTTTTCGTCTCA	NA	False	NA	NA	False	NA	NA	NA	4665796	4661812	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4662667_4663183
tx.9971	chr19	-	1554	7	FSM	ENSMUSG00000024889.6	ENSMUST00000224675.3	862	7	-311	-381	10	0	multi-exon	FALSE	canonical	3	266	junction_6	51.0315806361338	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTTGGAACCTTGGG	NA	False	NA	NA	False	NA	NA	NA	4675658	4672620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220
tx.9972	chr19	-	1412	8	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	11	0	combination_of_known_junctions	TRUE	canonical	3	108	junction_6	91.2554163894295	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTTGGAACCTTGGG	NA	False	NA	NA	False	NA	NA	NA	4675657	4672620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675121_4675220_4675324_4675460
tx.9973	chr19	-	1450	8	FSM	ENSMUSG00000024889.6	ENSMUST00000225476.2	1455	8	3	2	2	0	multi-exon	FALSE	canonical	3	51	junction_4	109.573011722592	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTTGGAACCTTGGG	NA	False	NA	NA	False	NA	NA	NA	4675666	4672620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675125_4675220_4675324_4675460
tx.9974	chr19	-	1424	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	3	-2	3	0	multi-exon	FALSE	canonical	3	266	junction_6	48.136286113662	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTTGGAACCTTGGG	NA	False	NA	NA	False	NA	NA	NA	4675665	4672620	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
tx.9975	chr19	+	8156	37	NNC	ENSMUSG00000067889.8	novel	8299	37	NA	NA	-412	-6	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	10.212669147246	17	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTCTGGGTGTTGTTG	5149	False	NA	NA	False	NA	NA	NA	4761999	4802382	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NNC_chr19_+_4762341_4768846_4769026_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
tx.9976	chr19	+	8085	36	NIC	ENSMUSG00000067889.8	novel	953	5	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	9.77443562753035	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTGTTGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	4771115	4802386	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_4771561_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
tx.9977	chr19	+	5848	24	ISM	ENSMUSG00000067889.8	ENSMUST00000008991.8	8299	37	23008	8	-7604	-8	3prime_fragment	FALSE	canonical	3	16	junction_1	7.78637266279083	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCCTCTGGGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	4784202	4802380	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
tx.9978	chr19	+	3718	18	ISM	ENSMUSG00000067889.8	ENSMUST00000008991.8	8299	37	31230	3	618	-3	3prime_fragment	FALSE	canonical	3	25	junction_2	5.91578733495276	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGGTGTTGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	4792424	4802385	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_+_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
tx.9979	chr19	+	1808	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	-25	0	3	0	multi-exon	FALSE	canonical	3	32	junction_3	20.1163283594862	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTAACTGAGTGGC	NA	False	NA	NA	False	NA	NA	NA	4806573	4815968	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
tx.998	chr1	-	2579	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	-18	-959	-18	218	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	164135076	164118739	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
tx.9980	chr19	+	2437	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-19	1776	3	-1135	multi-exon	FALSE	canonical	3	81	junction_1	0	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAAAAGAATCATTTATT	NA	False	NA	NA	False	NA	NA	NA	4806573	4809594	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4806690_4807273
tx.9981	chr19	-	2220	2	ISM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	7748	353	7626	0	3prime_fragment	FALSE	canonical	3	363	junction_1	0	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	4853914	4850949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	ISM_chr19_-_4851834_4852578
tx.9982	chr19	-	2779	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	33	353	-16	0	multi-exon	FALSE	canonical	3	363	junction_1	19	619	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	7798	False	NA	NA	False	NA	NA	NA	4861629	4850949	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4851834_4852578_4854044_4861199
tx.9983	chr19	-	1041	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	26	0	-19	0	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	183	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	4889334	4875393	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
tx.9984	chr19	+	1939	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	35	6	3	1	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGTGTAAGTGC	NA	False	NA	NA	False	NA	NA	NA	4905192	4910940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
tx.9985	chr19	-	2890	21	FSM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	-9	6	-9	1	multi-exon	FALSE	canonical	2	4	junction_20	6.25519783859791	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGTTTTGTTTTT	304	False	NA	NA	False	NA	NA	NA	4927946	4911249	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266_4922387_4922569_4922685_4927738
tx.9986	chr19	+	2299	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162134.2	2314	3	15	0	1	0	multi-exon	FALSE	canonical	3	16	junction_1	74.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	4928732	4935423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4928834_4930148_4930427_4933503
tx.9987	chr19	+	3615	2	FSM	ENSMUSG00000006463.14	ENSMUST00000162754.2	939	2	-1063	-1613	0	0	multi-exon	TRUE	canonical	3	165	junction_1	0	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	4928731	4935423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4930427_4933503
tx.9988	chr19	+	2524	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	32	2	0	0	multi-exon	FALSE	canonical	3	97	junction_1	34	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	4928731	4935423	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_4929058_4930148_4930427_4933503
tx.9989	chr19	-	5597	17	FSM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	3	2	2	-2	multi-exon	FALSE	canonical	2	6	junction_3	3.75832409459323	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATTTTATTTTGTGTG	5076	False	NA	NA	False	NA	NA	NA	4956653	4936907	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
tx.999	chr1	+	1729	14	NIC	ENSMUSG00000026575.16	novel	1740	14	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	27.275061761302	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGACTTTGGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	164135245	164264866	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr1_+_164135324_164135628_164135820_164140424_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
tx.9990	chr19	-	2646	18	FSM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	35	2	-5	0	multi-exon	TRUE	canonical	3	495	junction_17	96.7659038009169	1055	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	NA	False	NA	NA	NA	4978280	4957258	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
tx.9991	chr19	-	4101	7	FSM	ENSMUSG00000024901.16	ENSMUST00000025834.15	4110	7	9	0	9	0	multi-exon	FALSE	canonical	1	2	junction_1	5.01386965216377	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTGGTAAAGGACTTCA	8715	False	NA	NA	False	NA	NA	NA	4993146	4979744	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986248_4988076_4988207_4991787_4991941_4992965
tx.9992	chr19	+	826	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	168	2051	-15	4	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGCTTCTCTCCTGAG	3711	False	NA	NA	False	NA	NA	NA	5012342	5014976	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
tx.9993	chr19	+	2267	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	23.4795655837156	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGATTCCTGGAGTGTTCA	4270	False	NA	NA	False	NA	NA	NA	5074099	5081995	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
tx.9994	chr19	+	2399	12	FSM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	216	4	5	-1	multi-exon	FALSE	canonical	3	72	junction_1	10.4311992290135	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTCCTGGAGTGTTCAC	4274	False	NA	NA	False	NA	NA	NA	5074103	5081996	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
tx.9995	chr19	+	2021	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	11	0	11	0	multi-exon	FALSE	canonical	3	75	junction_1	0	91	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCTGTTACTCTC	213	False	NA	NA	False	NA	NA	NA	5088864	5091159	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5090061_5090334
tx.9996	chr19	+	1374	10	FSM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	9	5	9	-5	multi-exon	FALSE	canonical	3	224	junction_4	16.1528195757556	191	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGGCTGATGTGT	2739	False	NA	NA	False	NA	NA	NA	5091390	5099940	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
tx.9997	chr19	+	4385	10	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	82	1	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	8.35330939076111	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCTTGATAACTAGAAA	NA	False	NA	NA	False	NA	NA	NA	5100590	5107100	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	NIC_chr19_+_5100900_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
tx.9998	chr19	+	4430	10	FSM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	-246	0	106	0	multi-exon	FALSE	canonical	3	10	junction_1	7.87557562074193	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGCTTGATAACTAGAA	NA	False	NA	NA	False	NA	NA	NA	5100614	5107099	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
tx.9999	chr19	-	2617	2	FSM	ENSMUSG00000061451.14	ENSMUST00000077066.8	4006	2	-12	1401	-12	-1401	multi-exon	FALSE	canonical	2	12	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTCACACGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	5135571	5130758	ES_cDNA_PacBio	iso_detect_de_novo_Bambu_cDNA_PacBio	FSM_chr19_-_5133130_5135325
